Query 041084
Match_columns 225
No_of_seqs 160 out of 1584
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:41:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041084.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041084hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 5.6E-43 1.2E-47 326.6 14.3 222 1-223 268-511 (511)
2 PLN02932 3-ketoacyl-CoA syntha 100.0 7.6E-42 1.7E-46 317.6 12.0 217 1-217 240-476 (478)
3 PLN02854 3-ketoacyl-CoA syntha 100.0 2E-40 4.4E-45 310.0 13.6 216 1-217 280-518 (521)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 2.5E-38 5.4E-43 295.6 13.2 215 1-216 264-499 (502)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 6.6E-37 1.4E-41 282.4 8.0 216 1-216 226-464 (466)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 4.4E-32 9.5E-37 241.3 11.6 157 6-195 147-314 (323)
7 PLN02326 3-oxoacyl-[acyl-carri 99.9 2.1E-26 4.5E-31 209.9 14.7 171 6-195 190-371 (379)
8 CHL00203 fabH 3-oxoacyl-acyl-c 99.9 1E-25 2.2E-30 201.0 14.0 156 15-195 151-317 (326)
9 PRK05963 3-oxoacyl-(acyl carri 99.9 2.2E-25 4.7E-30 198.6 14.3 156 14-195 151-318 (326)
10 PRK12880 3-oxoacyl-(acyl carri 99.9 1.9E-25 4.2E-30 202.0 12.8 159 15-195 161-330 (353)
11 PRK07204 3-oxoacyl-(acyl carri 99.9 4.5E-25 9.7E-30 196.8 14.2 156 15-195 155-321 (329)
12 PLN03172 chalcone synthase fam 99.9 7E-25 1.5E-29 200.9 10.6 76 120-195 294-378 (393)
13 cd00830 KAS_III Ketoacyl-acyl 99.9 3.4E-24 7.4E-29 189.4 13.7 155 14-196 150-315 (320)
14 PRK12879 3-oxoacyl-(acyl carri 99.9 5E-24 1.1E-28 189.3 14.3 152 15-195 154-316 (325)
15 PLN03173 chalcone synthase; Pr 99.9 6.2E-24 1.3E-28 194.5 10.2 76 120-195 294-378 (391)
16 TIGR00747 fabH 3-oxoacyl-(acyl 99.9 5.6E-23 1.2E-27 182.2 14.5 148 16-196 153-311 (318)
17 PRK06840 hypothetical protein; 99.9 5.4E-23 1.2E-27 184.2 14.1 151 19-196 162-328 (339)
18 PLN03168 chalcone synthase; Pr 99.9 1.2E-23 2.6E-28 192.6 10.0 74 121-195 294-377 (389)
19 PLN03169 chalcone synthase fam 99.9 1.3E-23 2.9E-28 192.4 10.2 94 102-195 270-380 (391)
20 PRK09258 3-oxoacyl-(acyl carri 99.9 2.6E-23 5.7E-28 185.9 11.7 143 15-196 178-331 (338)
21 PLN03170 chalcone synthase; Pr 99.9 1.9E-23 4E-28 192.0 9.7 164 1-195 198-382 (401)
22 cd00831 CHS_like Chalcone and 99.9 2.7E-23 5.9E-28 187.8 7.9 77 120-196 278-356 (361)
23 PRK09352 3-oxoacyl-(acyl carri 99.9 6.3E-22 1.4E-26 175.4 13.8 147 16-196 154-311 (319)
24 PRK07515 3-oxoacyl-(acyl carri 99.9 1.5E-21 3.3E-26 177.3 13.4 155 16-195 196-363 (372)
25 PRK06816 3-oxoacyl-(acyl carri 99.9 1.3E-21 2.9E-26 178.3 11.9 97 98-195 257-369 (378)
26 PLN03171 chalcone synthase-lik 99.9 8E-22 1.7E-26 181.1 10.0 75 120-195 305-386 (399)
27 COG3424 BcsA Predicted naringe 99.9 2.1E-21 4.5E-26 169.1 9.8 166 1-195 168-344 (356)
28 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 3.8E-20 8.1E-25 135.9 7.5 76 120-196 8-83 (90)
29 TIGR00748 HMG_CoA_syn_Arc hydr 99.8 1.7E-19 3.7E-24 162.6 10.6 73 120-195 225-299 (345)
30 PRK04262 hypothetical protein; 99.8 4.4E-19 9.5E-24 159.9 9.0 74 120-195 226-300 (347)
31 cd00827 init_cond_enzymes "ini 99.8 1.1E-18 2.3E-23 154.6 10.6 76 121-196 240-319 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 99.7 3.4E-16 7.3E-21 143.0 10.4 76 120-195 222-309 (379)
33 PF02797 Chal_sti_synt_C: Chal 99.6 2.9E-15 6.3E-20 120.5 7.5 76 121-196 58-142 (151)
34 PF08392 FAE1_CUT1_RppA: FAE1/ 99.5 3E-15 6.5E-20 131.1 0.2 99 1-99 175-282 (290)
35 PLN02577 hydroxymethylglutaryl 99.3 2.9E-12 6.3E-17 119.5 9.0 97 99-195 201-362 (459)
36 cd00327 cond_enzymes Condensin 99.3 1.1E-12 2.5E-17 111.8 5.3 76 120-195 162-248 (254)
37 COG3425 PksG 3-hydroxy-3-methy 99.3 6.1E-12 1.3E-16 113.6 9.0 75 120-195 226-302 (377)
38 cd00825 decarbox_cond_enzymes 99.2 8.9E-12 1.9E-16 110.4 4.6 76 120-195 222-326 (332)
39 TIGR01833 HMG-CoA-S_euk 3-hydr 98.8 1.3E-08 2.8E-13 95.1 9.1 76 120-195 240-365 (454)
40 PRK06025 acetyl-CoA acetyltran 98.0 1.4E-05 3E-10 74.2 6.7 69 120-191 332-406 (417)
41 PRK06690 acetyl-CoA acetyltran 97.5 0.00014 3E-09 66.4 5.3 57 120-176 275-336 (361)
42 PF08545 ACP_syn_III: 3-Oxoacy 97.3 0.00011 2.3E-09 52.6 1.6 34 14-54 46-79 (80)
43 PRK06147 3-oxoacyl-(acyl carri 97.1 0.004 8.6E-08 56.4 9.6 73 120-192 251-331 (348)
44 TIGR02845 spore_V_AD stage V s 96.5 0.031 6.7E-07 50.3 10.5 77 120-197 219-309 (327)
45 KOG1393 Hydroxymethylglutaryl- 96.4 0.0066 1.4E-07 55.4 5.5 40 156-195 327-368 (462)
46 PF08540 HMG_CoA_synt_C: Hydro 96.3 0.0026 5.7E-08 56.2 2.7 41 155-195 151-193 (282)
47 cd00834 KAS_I_II Beta-ketoacyl 95.3 0.1 2.2E-06 47.5 8.7 60 120-179 292-360 (406)
48 PRK06501 3-oxoacyl-(acyl carri 95.0 0.13 2.8E-06 47.8 8.7 62 120-181 306-376 (425)
49 cd00828 elong_cond_enzymes "el 94.1 0.12 2.5E-06 47.4 6.1 54 120-174 291-351 (407)
50 PRK05656 acetyl-CoA acetyltran 93.8 0.19 4.2E-06 46.3 6.9 75 120-194 308-384 (393)
51 PRK08256 lipid-transfer protei 93.3 0.67 1.4E-05 42.6 9.6 77 120-197 281-384 (391)
52 cd00751 thiolase Thiolase are 93.3 0.24 5.2E-06 45.4 6.6 56 120-175 302-358 (386)
53 PLN02644 acetyl-CoA C-acetyltr 93.2 0.26 5.7E-06 45.4 6.7 76 120-195 308-385 (394)
54 smart00825 PKS_KS Beta-ketoacy 93.0 0.43 9.3E-06 43.8 7.9 54 120-173 296-358 (424)
55 PRK08242 acetyl-CoA acetyltran 92.8 0.35 7.6E-06 44.9 6.9 53 120-172 317-370 (402)
56 PRK06445 acetyl-CoA acetyltran 92.6 0.55 1.2E-05 43.3 7.9 69 120-188 309-378 (394)
57 TIGR03150 fabF beta-ketoacyl-a 92.3 1 2.2E-05 41.1 9.3 53 120-172 292-350 (407)
58 PRK09051 beta-ketothiolase; Pr 92.0 0.64 1.4E-05 43.0 7.6 55 120-175 309-365 (394)
59 PRK07801 acetyl-CoA acetyltran 92.0 0.54 1.2E-05 43.0 7.1 56 120-175 297-353 (382)
60 PRK09052 acetyl-CoA acetyltran 91.9 0.65 1.4E-05 43.0 7.5 55 120-175 314-370 (399)
61 TIGR01930 AcCoA-C-Actrans acet 91.7 0.49 1.1E-05 43.4 6.6 71 120-191 303-375 (386)
62 PRK07850 acetyl-CoA acetyltran 91.4 0.88 1.9E-05 41.9 7.8 76 120-195 302-379 (387)
63 PRK06504 acetyl-CoA acetyltran 90.2 1.5 3.2E-05 40.5 8.1 57 120-176 305-365 (390)
64 PRK07661 acetyl-CoA acetyltran 90.0 1.1 2.3E-05 41.4 7.1 56 120-175 306-362 (391)
65 PRK06954 acetyl-CoA acetyltran 90.0 0.8 1.7E-05 42.3 6.2 76 120-195 312-389 (397)
66 PRK08235 acetyl-CoA acetyltran 89.9 0.86 1.9E-05 42.0 6.3 75 120-194 308-384 (393)
67 PRK08304 stage V sporulation p 89.6 3.8 8.2E-05 37.2 9.9 77 120-197 225-316 (337)
68 PRK05790 putative acyltransfer 89.4 1.1 2.4E-05 41.1 6.6 56 120-175 308-364 (393)
69 PRK07314 3-oxoacyl-(acyl carri 89.0 2 4.4E-05 39.3 8.1 52 120-171 293-350 (411)
70 PRK07851 acetyl-CoA acetyltran 88.9 1 2.3E-05 41.7 6.2 67 120-186 320-387 (406)
71 TIGR02430 pcaF beta-ketoadipyl 88.8 1.2 2.6E-05 41.3 6.4 55 120-175 313-371 (400)
72 PRK05952 3-oxoacyl-(acyl carri 88.7 3.7 8.1E-05 37.7 9.6 59 120-181 271-338 (381)
73 PRK13359 beta-ketoadipyl CoA t 88.4 1.4 3.1E-05 40.8 6.7 55 120-175 313-371 (400)
74 cd00829 SCP-x_thiolase Thiolas 88.1 3.4 7.4E-05 37.3 8.9 73 120-193 268-367 (375)
75 PRK09050 beta-ketoadipyl CoA t 87.7 1.8 3.8E-05 40.2 6.8 55 120-175 314-372 (401)
76 KOG1390 Acetyl-CoA acetyltrans 87.6 0.57 1.2E-05 42.3 3.3 57 120-176 311-371 (396)
77 PRK06333 3-oxoacyl-(acyl carri 87.4 3.1 6.8E-05 38.3 8.3 46 120-166 305-356 (424)
78 PRK09185 3-oxoacyl-(acyl carri 87.2 6.6 0.00014 36.0 10.3 51 120-172 277-332 (392)
79 PRK07910 3-oxoacyl-(acyl carri 86.8 4.4 9.4E-05 37.7 8.9 59 120-179 303-369 (418)
80 PRK06633 acetyl-CoA acetyltran 86.6 1 2.2E-05 41.6 4.6 53 120-172 307-360 (392)
81 PRK07103 polyketide beta-ketoa 86.5 2.3 5E-05 39.3 6.9 54 120-173 298-354 (410)
82 PTZ00050 3-oxoacyl-acyl carrie 86.4 3.4 7.4E-05 38.3 8.0 54 120-173 301-361 (421)
83 PRK08257 acetyl-CoA acetyltran 85.4 9.4 0.0002 36.4 10.6 76 120-195 309-388 (498)
84 PRK07108 acetyl-CoA acetyltran 85.2 2.3 4.9E-05 39.3 6.1 56 120-175 307-363 (392)
85 cd00833 PKS polyketide synthas 85.0 3.5 7.6E-05 37.6 7.3 54 120-173 296-358 (421)
86 PRK06289 acetyl-CoA acetyltran 84.9 5.8 0.00013 36.6 8.7 75 120-195 293-394 (403)
87 PRK06064 acetyl-CoA acetyltran 84.3 7.3 0.00016 35.6 9.0 72 120-192 275-375 (389)
88 PRK12578 acetyl-CoA acetyltran 84.2 4.7 0.0001 36.9 7.7 55 120-175 274-348 (385)
89 PRK06205 acetyl-CoA acetyltran 83.6 5.5 0.00012 36.8 8.0 56 120-175 315-374 (404)
90 PRK07516 acetyl-CoA acetyltran 83.5 7.6 0.00016 35.6 8.8 56 120-175 277-351 (389)
91 PLN02287 3-ketoacyl-CoA thiola 83.2 5.1 0.00011 37.8 7.7 56 120-175 348-404 (452)
92 PRK08947 fadA 3-ketoacyl-CoA t 82.7 7.3 0.00016 35.8 8.4 56 120-175 299-358 (387)
93 PF00195 Chal_sti_synt_N: Chal 82.5 5.6 0.00012 34.1 7.0 68 120-191 119-190 (226)
94 PRK08722 3-oxoacyl-(acyl carri 82.5 3.1 6.8E-05 38.6 5.9 61 120-180 295-365 (414)
95 KOG1389 3-oxoacyl CoA thiolase 82.1 2.8 6E-05 37.9 5.1 75 120-195 337-416 (435)
96 PRK14691 3-oxoacyl-(acyl carri 81.6 4.4 9.6E-05 36.7 6.4 45 120-165 223-273 (342)
97 PLN02787 3-oxoacyl-[acyl-carri 81.0 8.8 0.00019 37.1 8.5 60 120-180 422-490 (540)
98 PRK08131 acetyl-CoA acetyltran 80.9 6.4 0.00014 36.5 7.3 55 120-175 313-371 (401)
99 PRK06366 acetyl-CoA acetyltran 80.5 6.3 0.00014 36.2 7.1 33 120-152 302-334 (388)
100 TIGR02445 fadA fatty oxidation 79.4 11 0.00024 34.7 8.3 46 120-165 297-346 (385)
101 PRK06158 thiolase; Provisional 78.4 24 0.00052 32.3 10.2 29 120-148 271-299 (384)
102 PRK08963 fadI 3-ketoacyl-CoA t 77.9 8.8 0.00019 35.8 7.3 74 120-194 326-419 (428)
103 cd00832 CLF Chain-length facto 77.4 11 0.00024 34.7 7.8 58 120-179 287-353 (399)
104 PRK09116 3-oxoacyl-(acyl carri 77.1 12 0.00026 34.6 7.9 47 120-168 292-343 (405)
105 PRK07967 3-oxoacyl-(acyl carri 75.0 12 0.00025 34.8 7.2 58 121-179 289-354 (406)
106 PRK08313 acetyl-CoA acetyltran 74.3 35 0.00075 31.3 10.1 29 120-148 274-302 (386)
107 PRK06519 3-oxoacyl-(acyl carri 72.5 15 0.00034 33.9 7.4 69 107-181 285-361 (398)
108 PLN02836 3-oxoacyl-[acyl-carri 72.4 10 0.00023 35.3 6.3 51 120-170 316-374 (437)
109 PRK06059 lipid-transfer protei 72.3 35 0.00075 31.3 9.7 56 120-175 290-364 (399)
110 PRK08142 acetyl-CoA acetyltran 71.8 48 0.001 30.5 10.4 72 120-192 272-372 (388)
111 PRK08439 3-oxoacyl-(acyl carri 70.1 19 0.0004 33.2 7.4 59 121-179 290-357 (406)
112 cd00826 nondecarbox_cond_enzym 69.5 27 0.00059 32.1 8.3 55 120-175 286-360 (393)
113 PRK06066 acetyl-CoA acetyltran 68.9 34 0.00074 31.6 8.7 55 120-175 275-349 (385)
114 PF02803 Thiolase_C: Thiolase, 67.2 10 0.00023 29.3 4.3 75 120-195 39-116 (123)
115 PRK08170 acetyl-CoA acetyltran 66.2 17 0.00037 33.8 6.3 19 15-33 261-279 (426)
116 PF01135 PCMT: Protein-L-isoas 65.0 6.7 0.00014 33.1 3.1 37 159-195 50-86 (209)
117 PRK06157 acetyl-CoA acetyltran 64.9 56 0.0012 30.1 9.4 71 120-191 285-382 (398)
118 COG0304 FabB 3-oxoacyl-(acyl-c 64.4 18 0.00039 33.8 6.0 18 17-34 227-244 (412)
119 PTZ00455 3-ketoacyl-CoA thiola 63.1 48 0.001 31.1 8.7 28 120-147 326-353 (438)
120 TIGR02446 FadI fatty oxidation 62.6 29 0.00063 32.5 7.1 55 120-175 328-401 (430)
121 PF12633 Adenyl_cycl_N: Adenyl 59.5 8 0.00017 32.7 2.5 58 120-177 114-193 (204)
122 PRK09258 3-oxoacyl-(acyl carri 58.6 42 0.00091 29.7 7.2 64 120-191 80-151 (338)
123 PLN00415 3-ketoacyl-CoA syntha 57.2 41 0.0009 32.0 7.1 68 120-191 153-224 (466)
124 PLN03172 chalcone synthase fam 56.9 32 0.0007 31.8 6.3 69 120-192 121-193 (393)
125 PLN03173 chalcone synthase; Pr 55.8 46 0.001 30.7 7.2 68 120-191 121-192 (391)
126 cd00831 CHS_like Chalcone and 55.1 52 0.0011 29.5 7.3 65 120-191 104-175 (361)
127 PLN02192 3-ketoacyl-CoA syntha 54.9 42 0.00092 32.3 6.8 81 105-189 177-264 (511)
128 PLN02377 3-ketoacyl-CoA syntha 51.2 54 0.0012 31.5 6.9 82 105-190 173-261 (502)
129 PF02887 PK_C: Pyruvate kinase 50.0 33 0.00071 25.7 4.4 51 139-190 51-101 (117)
130 PRK07937 lipid-transfer protei 49.8 1.1E+02 0.0024 27.8 8.5 71 120-192 264-337 (352)
131 PF08392 FAE1_CUT1_RppA: FAE1/ 48.5 71 0.0015 28.5 6.8 80 107-190 86-172 (290)
132 COG4087 Soluble P-type ATPase 47.9 66 0.0014 25.6 5.8 74 106-192 30-103 (152)
133 PRK08329 threonine synthase; V 46.3 27 0.00058 31.6 3.9 33 163-195 313-345 (347)
134 PLN02932 3-ketoacyl-CoA syntha 45.8 68 0.0015 30.6 6.7 67 120-190 167-237 (478)
135 PLN03168 chalcone synthase; Pr 45.7 88 0.0019 28.8 7.3 69 120-192 120-192 (389)
136 COG3072 CyaA Adenylate cyclase 44.3 22 0.00048 35.1 3.1 56 120-176 115-193 (853)
137 PLN03170 chalcone synthase; Pr 44.1 72 0.0016 29.5 6.5 67 120-190 125-195 (401)
138 PLN03171 chalcone synthase-lik 43.5 74 0.0016 29.4 6.5 69 120-192 127-199 (399)
139 PLN03169 chalcone synthase fam 43.3 87 0.0019 28.8 6.9 69 120-192 125-197 (391)
140 PF12244 DUF3606: Protein of u 42.6 6.8 0.00015 26.1 -0.4 30 133-163 20-49 (57)
141 PRK07204 3-oxoacyl-(acyl carri 42.4 94 0.002 27.3 6.8 64 120-190 71-142 (329)
142 COG2518 Pcm Protein-L-isoaspar 41.6 22 0.00049 30.1 2.5 31 165-195 56-86 (209)
143 PRK06816 3-oxoacyl-(acyl carri 39.9 1.3E+02 0.0027 27.4 7.3 67 120-192 82-153 (378)
144 PRK12879 3-oxoacyl-(acyl carri 38.0 1.6E+02 0.0034 25.7 7.5 63 120-191 72-142 (325)
145 PRK12880 3-oxoacyl-(acyl carri 37.9 1.1E+02 0.0023 27.7 6.5 61 120-189 79-147 (353)
146 PRK12404 stage V sporulation p 36.3 2E+02 0.0043 26.3 7.7 82 120-222 73-157 (334)
147 COG3424 BcsA Predicted naringe 36.1 1.5E+02 0.0032 27.0 6.8 83 103-190 79-165 (356)
148 PLN02854 3-ketoacyl-CoA syntha 36.0 1.1E+02 0.0023 29.7 6.4 66 120-189 207-276 (521)
149 TIGR02813 omega_3_PfaA polyket 34.0 1.6E+02 0.0034 34.3 8.1 53 120-172 332-393 (2582)
150 PRK06260 threonine synthase; V 32.5 57 0.0012 30.0 3.9 34 162-195 336-369 (397)
151 PLN02569 threonine synthase 31.3 56 0.0012 31.2 3.7 35 162-196 407-441 (484)
152 cd00830 KAS_III Ketoacyl-acyl 31.2 2.1E+02 0.0045 24.7 7.1 62 120-190 69-138 (320)
153 PRK06437 hypothetical protein; 31.1 85 0.0018 21.3 3.7 44 136-193 23-66 (67)
154 TIGR02609 doc_partner putative 31.0 42 0.00091 23.4 2.1 41 154-197 2-42 (74)
155 TIGR03844 cysteate_syn cysteat 30.8 60 0.0013 30.1 3.7 37 161-197 347-383 (398)
156 PRK06365 acetyl-CoA acetyltran 29.7 1.8E+02 0.0039 27.1 6.7 67 120-192 56-128 (430)
157 cd00327 cond_enzymes Condensin 29.4 2.1E+02 0.0046 23.6 6.6 62 120-190 26-95 (254)
158 PRK04262 hypothetical protein; 29.3 1.6E+02 0.0035 26.3 6.2 64 120-191 70-141 (347)
159 cd00827 init_cond_enzymes "ini 29.3 2.3E+02 0.005 24.5 7.1 63 120-191 67-137 (324)
160 COG2521 Predicted archaeal met 29.1 32 0.00069 30.2 1.4 18 178-195 131-148 (287)
161 PF04014 Antitoxin-MazE: Antid 28.8 66 0.0014 20.0 2.6 34 157-193 2-35 (47)
162 PF02801 Ketoacyl-synt_C: Beta 28.8 95 0.0021 23.1 4.0 55 120-174 42-104 (119)
163 PRK09450 cyaA adenylate cyclas 28.5 50 0.0011 33.7 2.9 64 120-186 112-200 (830)
164 PRK08313 acetyl-CoA acetyltran 28.3 2.2E+02 0.0048 26.0 7.0 67 120-192 43-115 (386)
165 cd00751 thiolase Thiolase are 28.2 2.4E+02 0.0053 25.6 7.2 63 120-190 41-111 (386)
166 PLN02326 3-oxoacyl-[acyl-carri 27.4 2.1E+02 0.0046 25.9 6.7 62 120-190 115-183 (379)
167 PRK08197 threonine synthase; V 26.5 78 0.0017 29.1 3.7 36 162-197 349-384 (394)
168 PRK09352 3-oxoacyl-(acyl carri 26.3 3.2E+02 0.007 23.6 7.5 28 120-147 71-103 (319)
169 PRK07591 threonine synthase; V 26.2 87 0.0019 29.2 3.9 36 162-197 359-394 (421)
170 PRK05638 threonine synthase; V 25.3 92 0.002 29.1 3.9 36 162-197 324-359 (442)
171 PRK09268 acetyl-CoA acetyltran 23.7 4.3E+02 0.0094 24.6 8.1 21 13-33 257-277 (427)
172 PRK07855 lipid-transfer protei 23.5 2.7E+02 0.0059 25.5 6.7 66 120-190 43-108 (386)
173 PRK06366 acetyl-CoA acetyltran 22.5 3.3E+02 0.0072 24.9 7.0 79 106-190 32-115 (388)
174 TIGR00747 fabH 3-oxoacyl-(acyl 22.0 3.9E+02 0.0085 23.1 7.2 28 120-147 70-102 (318)
175 COG0776 HimA Bacterial nucleoi 21.9 1.1E+02 0.0023 22.7 2.9 45 134-192 6-50 (94)
176 CHL00203 fabH 3-oxoacyl-acyl-c 21.7 3.7E+02 0.0081 23.5 7.0 63 120-191 70-139 (326)
177 PRK13942 protein-L-isoaspartat 21.4 1E+02 0.0022 25.6 3.2 32 164-195 59-90 (212)
178 PRK08235 acetyl-CoA acetyltran 20.9 3E+02 0.0065 25.3 6.4 67 120-191 45-116 (393)
179 PRK13943 protein-L-isoaspartat 20.7 1.1E+02 0.0024 27.5 3.4 33 163-195 62-94 (322)
180 PF13693 HTH_35: Winged helix- 20.7 51 0.0011 23.5 1.0 33 128-160 36-68 (78)
181 PLN02765 pyruvate kinase 20.5 2.3E+02 0.0049 27.5 5.6 29 166-195 488-516 (526)
182 TIGR00748 HMG_CoA_syn_Arc hydr 20.4 3.1E+02 0.0067 24.6 6.2 29 120-148 69-102 (345)
183 PRK05656 acetyl-CoA acetyltran 20.3 3.9E+02 0.0086 24.4 7.0 67 120-191 45-116 (393)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.6e-43 Score=326.63 Aligned_cols=222 Identities=60% Similarity=1.021 Sum_probs=189.5
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeec--------Cccchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRG--------RVLKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~--------g~~~~~~ 71 (225)
+|++||.++|++++++++||||||||+||++.+.+..+++|++.+.++++.++| +.++++..++ .++|+++
T Consensus 268 ~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~ 347 (511)
T PLN02192 268 ITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLM 347 (511)
T ss_pred ccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecccccccceeeEecchhh
Confidence 578999999999999999999999999999865333344666666667888888 8898887763 4678888
Q ss_pred hhccccccccccccCCcccccccccceeeechhhhhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCCc---C
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLSE---W 148 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~~---e 148 (225)
..+|+.++.++++++|.+.+..+...+.+.|+|+++|+++++.++++++.+||||++||+|+++++.+.+.||+++ |
T Consensus 348 ~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e 427 (511)
T PLN02192 348 AVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHME 427 (511)
T ss_pred hhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhh
Confidence 8888887777888888776665666677899999999999988888999999999999999999999999999997 6
Q ss_pred cccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc-------CCCC---cCCCcchhcccCCCCCC
Q 041084 149 HMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI-------KPEQ---EKNRWTDEIDDFPVHVP 218 (225)
Q Consensus 149 ~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~-------~~~~---~~~~~~~~~~~~~~~~~ 218 (225)
+. ..++++||||||+|+|++|+++.++|++++||+|+++|||+||+|- +++. ++|||.||||+||++.|
T Consensus 428 ~s-r~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~~w~~~i~~yp~~~~ 506 (511)
T PLN02192 428 PS-RMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDEIHEFPVDVP 506 (511)
T ss_pred HH-HHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCCCchhhHHhCCCCCC
Confidence 66 3899999999999999999999999999999999999999999933 4433 34999999999999987
Q ss_pred CCCCC
Q 041084 219 NIAPI 223 (225)
Q Consensus 219 ~~~~~ 223 (225)
.+..|
T Consensus 507 ~~~~~ 511 (511)
T PLN02192 507 KVSTI 511 (511)
T ss_pred CCCCC
Confidence 76544
No 2
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.6e-42 Score=317.60 Aligned_cols=217 Identities=51% Similarity=0.894 Sum_probs=186.4
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecC-----c---cchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGR-----V---LKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g-----~---~~~~~ 71 (225)
+|.+||.+++++++++++||||||||+||++++.+..+++|++.+..++++++| +.++++..+.+ + +++++
T Consensus 240 ~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp 319 (478)
T PLN02932 240 ITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLP 319 (478)
T ss_pred cccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccch
Confidence 588999999999999999999999999999876332244676666668899999 99999988752 1 66777
Q ss_pred hhccccccccccccCCcccccccccceeeechhhhhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCCcCccc
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLSEWHME 151 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~ 151 (225)
..++..++.|++.++|.+.++.+..++.++|.++++++.+++.+.++++++||||++||+|+++++.+.+.||++++++.
T Consensus 320 ~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e 399 (478)
T PLN02932 320 MVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVE 399 (478)
T ss_pred HHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHH
Confidence 77788788788888888887767666778899999999888888888899999999999999999999999999994442
Q ss_pred --ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc-------ccCCCCc--CCCcchhcccCCCCC
Q 041084 152 --PMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN-------TIKPEQE--KNRWTDEIDDFPVHV 217 (225)
Q Consensus 152 --~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s-------~~~~~~~--~~~~~~~~~~~~~~~ 217 (225)
..++++||||||+|+|++|+++.++|++++||+|+++|||+||+ |++++.+ .|||.||||+||++.
T Consensus 400 ~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 400 ASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCCCC
Confidence 38999999999999999999999999999999999999999999 4465444 599999999999963
No 3
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2e-40 Score=310.02 Aligned_cols=216 Identities=55% Similarity=0.935 Sum_probs=165.7
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecC--c------cchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGR--V------LKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g--~------~~~~~ 71 (225)
+|++||.++|++++++++||||||||+||++.+++..+++|++.+++++++++| +.++++..+.+ + +++++
T Consensus 280 ~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~ 359 (521)
T PLN02854 280 ITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELM 359 (521)
T ss_pred eecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCCCccccccccccc
Confidence 478999999999999999999999999999865333345677878999999999 99999998842 2 23444
Q ss_pred hhccccccccccccCCcccccccccceeeechhhhhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCC---cC
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLS---EW 148 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~---~e 148 (225)
..++..++.+++.+++.+.+..+...+......+.+.+..+....|+++.|||||++||+|+++++.+.++||++ .|
T Consensus 360 ~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e 439 (521)
T PLN02854 360 AVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHME 439 (521)
T ss_pred chhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCccccc
Confidence 444554545555566655544333222222222222232333234566689999999999999999999999999 56
Q ss_pred cccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc-------CCCC----cCCCcchhcccCCCCC
Q 041084 149 HMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI-------KPEQ----EKNRWTDEIDDFPVHV 217 (225)
Q Consensus 149 ~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~-------~~~~----~~~~~~~~~~~~~~~~ 217 (225)
+. ..++++||||||||+|++|+++.++|++++||+|+++|||+||+|- +++. ..|||.||||+||++.
T Consensus 440 ~s-r~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 518 (521)
T PLN02854 440 PS-RMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKV 518 (521)
T ss_pred ch-HHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccCCCCchhhHhhCCCCC
Confidence 66 3899999999999999999999999999999999999999999932 4533 2599999999999975
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.5e-38 Score=295.65 Aligned_cols=215 Identities=52% Similarity=0.916 Sum_probs=160.1
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeec---Cc-----cchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRG---RV-----LKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~---g~-----~~~~~ 71 (225)
+|.+||.++++++++.++||||||||+||++.+++..+.+|++.++++++.++| +.++++..+. |+ +++++
T Consensus 264 ~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~ 343 (502)
T PLN02377 264 ITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLM 343 (502)
T ss_pred cccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchh
Confidence 578999999999999999999999999999864333334566668899999999 9999998873 32 34444
Q ss_pred hhccccccccccccCCcccccccccceeeechhhhhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCCc---C
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLSE---W 148 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~~---e 148 (225)
...|..++.+++.+++.+.+.++...+......+++++..++...+..++|||||++||+|+++++.+.+.||+++ |
T Consensus 344 ~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e 423 (502)
T PLN02377 344 AIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVE 423 (502)
T ss_pred hHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccch
Confidence 4444444444444455444332221111111122233333322223557899999999999999999999999997 5
Q ss_pred cccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc-------CCCCc--CCCcchhcccCCCC
Q 041084 149 HMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI-------KPEQE--KNRWTDEIDDFPVH 216 (225)
Q Consensus 149 ~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~-------~~~~~--~~~~~~~~~~~~~~ 216 (225)
+. ..++++||||||||+|++|+++.++|++++||+|+++|||+||+|- +++.. .|||.||||+||++
T Consensus 424 ~s-r~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~~~~w~~~i~~yp~~ 499 (502)
T PLN02377 424 AS-RMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNNSPWEDCIDKYPVK 499 (502)
T ss_pred HH-HHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCCCCCchhhHhhCCCc
Confidence 55 3899999999999999999999999999999999999999999933 45333 59999999999996
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.6e-37 Score=282.38 Aligned_cols=216 Identities=56% Similarity=0.961 Sum_probs=173.0
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeec--------Cccchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRG--------RVLKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~--------g~~~~~~ 71 (225)
||.+||.++|++++++++||||||||+||++.+....+++|++.++++++...+ +.+.++.... .++|+++
T Consensus 226 ~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp 305 (466)
T PLN00415 226 MTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELT 305 (466)
T ss_pred ccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeeecCCCcceEEEChHHH
Confidence 578899999999999999999999999999876543345777767777777555 6777654432 3578888
Q ss_pred hhccccccccccccCCcccccccccceeeechhhhhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCCcCccc
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLSEWHME 151 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~ 151 (225)
..++..++.+++.++|.+.+..+..++...+.+++.++.......|++...++||++|++|+++++.+.+.||++++++.
T Consensus 306 ~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVLdave~~LgL~~~~le 385 (466)
T PLN00415 306 VVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLE 385 (466)
T ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHHHHHHHHHcCCCHHHHH
Confidence 98888888888888887777666555444444555555444434455555599999999999999999999999998875
Q ss_pred c--cccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc-------cCCCCc-----CCCcchhcccCCCC
Q 041084 152 P--MTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT-------IKPEQE-----KNRWTDEIDDFPVH 216 (225)
Q Consensus 152 ~--~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~-------~~~~~~-----~~~~~~~~~~~~~~ 216 (225)
+ .++++||||||+|+++.|++..++++.++||+++++|||+||+| ++++.+ +|||.||||+||++
T Consensus 386 ~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~ 464 (466)
T PLN00415 386 PSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYPVH 464 (466)
T ss_pred HHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHHHhccCCcccccCCCCchhhHHhCCCC
Confidence 4 88999999999999999999999999999999999999999993 345333 39999999999996
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.97 E-value=4.4e-32 Score=241.30 Aligned_cols=157 Identities=23% Similarity=0.278 Sum_probs=132.9
Q ss_pred ccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccc
Q 041084 6 YTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITA 84 (225)
Q Consensus 6 ~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~ 84 (225)
..++||+ |++||||||+|+||++++.. .+++++.+++| ++++.+..+.+.+..
T Consensus 147 ld~~dR~---t~vlFgDGAgAvvl~~~~~~--------~~i~~~~l~sdg~~~~~l~~~~~~~~~--------------- 200 (323)
T COG0332 147 LDWTDRD---TCVLFGDGAGAVVLEATEDD--------NGILDTDLGSDGSQGDLLYLPGGGSAT--------------- 200 (323)
T ss_pred CCHhhcc---ceEEEcCCceEEEEecCCCC--------cCeeeeeeeccccCCCeeeccCCCCcc---------------
Confidence 4556675 89999999999999999732 48899999999 888878777533321
Q ss_pred cCCcccccccccceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc
Q 041084 85 FEPLVLPASKQLLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT 154 (225)
Q Consensus 85 ~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~ 154 (225)
++. .....++.|+|+++|+++++.+...+ ++|||||+|||+|.+|++.++++|++|++|+. .+
T Consensus 201 -~~~-----~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~-~~ 273 (323)
T COG0332 201 -PKE-----ESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVV-VT 273 (323)
T ss_pred -ccc-----cccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHh-hH
Confidence 000 00014678999999999999854444 48999999999999999999999999999995 89
Q ss_pred cccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 155 LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 155 ~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+++|||||+||+|++|++++++|++|+||+++|++||+|++
T Consensus 274 ~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Glt 314 (323)
T COG0332 274 VDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLT 314 (323)
T ss_pred HHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcce
Confidence 99999999999999999999999999999999999999998
No 7
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.94 E-value=2.1e-26 Score=209.87 Aligned_cols=171 Identities=19% Similarity=0.259 Sum_probs=125.4
Q ss_pred ccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccc
Q 041084 6 YTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITA 84 (225)
Q Consensus 6 ~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~ 84 (225)
+.++|+. +..+|||||+|+||++.++.. .+++.+.+.+| ..++.+..+.++....... +. .....
T Consensus 190 ~~~~d~~---~~~lfGDGAaAvlL~~~~~~~-------~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~-~~--~~~~~- 255 (379)
T PLN02326 190 VDWTDRG---TCILFGDGAGAVVLQACDDDE-------DGLLGFDMHSDGNGHKHLHATFKGEDDDSSG-GN--TNGVG- 255 (379)
T ss_pred CCccccC---ceEEEcceeEEEEEEEcCCCC-------CceEEEEEEEcCCCCCeEEecCCCCcccccc-cc--ccccc-
Confidence 3445554 678999999999999876432 25667788888 7777776664322110000 00 00000
Q ss_pred cCCcccccccccceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc
Q 041084 85 FEPLVLPASKQLLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT 154 (225)
Q Consensus 85 ~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~ 154 (225)
. .+.......++.|+|+++|+++++.+...+ .+|||+|++||+|.++++.++++||++++|+ +.+
T Consensus 256 ---~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~-~~~ 330 (379)
T PLN02326 256 ---D-FPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKV-ISN 330 (379)
T ss_pred ---c-cccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHe-eec
Confidence 0 000011112477999999998776532222 3799999999999999999999999999999 478
Q ss_pred cccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 155 LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 155 ~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+++||||+|||+|++|++++++|++++||+|+|++||+|++
T Consensus 331 l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t 371 (379)
T PLN02326 331 LANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLT 371 (379)
T ss_pred HhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhe
Confidence 99999999999999999999999999999999999999998
No 8
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.93 E-value=1e-25 Score=201.03 Aligned_cols=156 Identities=20% Similarity=0.275 Sum_probs=118.6
Q ss_pred cceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccc
Q 041084 15 LANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPAS 93 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (225)
.++.+|||||+|+||++.++ .+++.+.+.+| +.+..+.++...... .. ++.... .
T Consensus 151 ~~~~~fgDga~A~ll~~~~~---------~~~~~~~~~t~g~~~~~~~~~~~~~~~--------~~-----~~~~~~--~ 206 (326)
T CHL00203 151 KTCILFGDGAGAAIIGASYE---------NSILGFKLCTDGKLNSHLQLMNKPVNN--------QS-----FGTTKL--P 206 (326)
T ss_pred CceEEEcceeeEEEEEEcCC---------CCeEEEEEEEcCCCcceEEecCCCCCc--------cc-----cccccc--c
Confidence 36899999999999998654 25567778888 666665554211000 00 000000 0
Q ss_pred cccceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 94 KQLLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 94 ~~~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
+....+++|+|+++++++++.++..+ .+|||+|++||+|.++++.++++||+|++|+ +.++++||||+|
T Consensus 207 ~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~s 285 (326)
T CHL00203 207 QGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKM-ITNLEKYGNTSA 285 (326)
T ss_pred cCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHh-hhHHHhhCcHHH
Confidence 01113477899999888765422222 4799999999999999999999999999999 589999999999
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
|++|++|++++++|++++||+|+|++||+|++
T Consensus 286 asi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s 317 (326)
T CHL00203 286 ASIPLALDEAIQNNKIQPGQIIVLSGFGAGLT 317 (326)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEEchhhh
Confidence 99999999999999999999999999999998
No 9
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.93 E-value=2.2e-25 Score=198.57 Aligned_cols=156 Identities=15% Similarity=0.240 Sum_probs=122.2
Q ss_pred ccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCccccc
Q 041084 14 VLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPA 92 (225)
Q Consensus 14 ~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~ 92 (225)
..++++|||||+|+||+++++.. .+++.+.+.+| +.++.+.+|.++.+.+.. +.. .
T Consensus 151 ~~~~~lfGDgA~A~ll~~~~~~~-------~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~--------------~~~--~ 207 (326)
T PRK05963 151 RASAVLFADAAGAVVLAPSAKAN-------SGVLGSQLISDGSHYDLIKIPAGGSARPFA--------------PER--D 207 (326)
T ss_pred cCceEEEeecceEEEEEecCCCC-------CceEEEEEEEcCCCCCeEEeCCCCcCCCCc--------------ccc--c
Confidence 34799999999999999876432 36778888999 888888888654432100 000 0
Q ss_pred ccccceeee-chhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccc
Q 041084 93 SKQLLFLEN-SVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNT 161 (225)
Q Consensus 93 ~~~~~~~~~-m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt 161 (225)
... .++. ++|+.+|++++..+...+ .+|||+|++||+|.++++.++++||++++|+ ..++++||||
T Consensus 208 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~-~~~l~~~Gn~ 284 (326)
T PRK05963 208 ASE--FLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKA-ASTLETYGNS 284 (326)
T ss_pred ccc--cceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHh-hhhHHhhCcH
Confidence 011 1223 367777777665432222 4799999999999999999999999999999 4899999999
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+|||+|++|+++++++++++||+|++++||+|++
T Consensus 285 ~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~ 318 (326)
T PRK05963 285 SAATIPLSLSLANLEQPLREGERLLFAAAGAGMT 318 (326)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhh
Confidence 9999999999999999999999999999999998
No 10
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.93 E-value=1.9e-25 Score=201.97 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=118.2
Q ss_pred cceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccc
Q 041084 15 LANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPAS 93 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (225)
.++.+|||||+|+||++.+++. ++ +.+.+| +.++.+.+|.++.+.+.. +....+....+..
T Consensus 161 ~~~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g~~~~~~~--------~~~~~~~~~~~~~ 222 (353)
T PRK12880 161 NLAPIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKGAMRIPKA--------DIFNDDSLMQTEE 222 (353)
T ss_pred CceeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCCCcCCCcc--------ccccccccccccc
Confidence 3689999999999999765421 22 467899 889999999765432100 0000000000000
Q ss_pred cccceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 94 KQLLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 94 ~~~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
.+....++|+|+.+|+++++.+++.+ .+|||+|++||+|+++++.++++||++++|+...++++||||||
T Consensus 223 ~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtss 302 (353)
T PRK12880 223 FRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSA 302 (353)
T ss_pred cccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHH
Confidence 11124578999999999987644333 37999999999999999999999999999993246899999999
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
||+|++|++++++|+++ ++|++||+|++
T Consensus 303 asip~~L~~~~~~~~~~----~ll~~~G~G~s 330 (353)
T PRK12880 303 CSLPALLCELDTPKEFK----ASLSAFGAGLS 330 (353)
T ss_pred HHHHHHHHHHHHcCCcE----EEEEEEchhhh
Confidence 99999999999888764 99999999999
No 11
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.93 E-value=4.5e-25 Score=196.77 Aligned_cols=156 Identities=17% Similarity=0.180 Sum_probs=120.9
Q ss_pred cceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccc
Q 041084 15 LANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPAS 93 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (225)
.+..+|||||+|+||++.++. .+++.+.+.++ ...+...++.++...+.. .. .. .
T Consensus 155 ~~~~lfGDGAaA~ll~~~~~~--------~~il~~~~~t~~~~~~~~~~~~~~~~~~~~--------------~~-~~-~ 210 (329)
T PRK07204 155 ESCILFGDGAAAVVITKGDHS--------SRILASHMETYSSGAHLSEIRGGGTMIHPR--------------EY-SE-E 210 (329)
T ss_pred cceEEEecccEEEEEEEcCCC--------CcEEEEEEEEecCCCCceEEecCCcCCCCc--------------cc-cc-c
Confidence 368999999999999987642 36778888888 776666666433221000 00 00 0
Q ss_pred cccceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 94 KQLLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 94 ~~~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
....+.+.|+|+++++.+.+.+...+ .+|||+|++||+|.++++.+++.|++|++++ ..++++||||+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~-~~~~~~~Gn~~s 289 (329)
T PRK07204 211 RKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERF-VTIFEDHGNMIA 289 (329)
T ss_pred cccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHh-hhhHhhhCcHHH
Confidence 11123567889888876655422222 5899999999999999999999999999998 589999999999
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
||+|++|++++++|++++||+|+|++||+|++
T Consensus 290 as~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s 321 (329)
T PRK07204 290 ASIPVALFEAIKQKKVQRGNKILLLGTSAGLS 321 (329)
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEEEchhhh
Confidence 99999999999999999999999999999998
No 12
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.92 E-value=7e-25 Score=200.88 Aligned_cols=76 Identities=29% Similarity=0.449 Sum_probs=69.4
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSWYELAYSE----AKGRIRKG---DRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip~~L~~~~----~~g~l~~G---d~vll~a~ 190 (225)
..||++|++||+|++|++.+.++||++++++.. .++++||||+|||+|++|++++ ++|++++| |++++++|
T Consensus 294 ~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~af 373 (393)
T PLN03172 294 DWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGF 373 (393)
T ss_pred ccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEe
Confidence 378999999999999999999999999999953 4799999999999999999987 45788777 89999999
Q ss_pred cCCcc
Q 041084 191 GSGFN 195 (225)
Q Consensus 191 G~G~s 195 (225)
|+|++
T Consensus 374 GpG~t 378 (393)
T PLN03172 374 GPGLT 378 (393)
T ss_pred CCcce
Confidence 99999
No 13
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.91 E-value=3.4e-24 Score=189.44 Aligned_cols=155 Identities=21% Similarity=0.280 Sum_probs=121.9
Q ss_pred ccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCccccc
Q 041084 14 VLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPA 92 (225)
Q Consensus 14 ~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~ 92 (225)
.....+|||||+|+||++.++. .+++.+.+.++ +.++.+.++.++.+.+.. .
T Consensus 150 ~~~~~~~GDgAaA~ll~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 202 (320)
T cd00830 150 RSTAVLFGDGAGAVVLEATEED--------PGILDSVLGSDGSGADLLTIPAGGSRSPFE-------------------D 202 (320)
T ss_pred CCceEEEeccceEEEEEecCCC--------CcEEEEEEEEcCCCCCeEEeCCCCcCCccc-------------------c
Confidence 3468999999999999987642 36788888999 888888877544332110 0
Q ss_pred ccccceeeechhhhhHhhhhccc-------hhhh---hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccc
Q 041084 93 SKQLLFLENSVARTIFKMKINPY-------VPDF---KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTS 162 (225)
Q Consensus 93 ~~~~~~~~~m~g~~v~~~a~~~~-------~~~~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~ 162 (225)
.......+.|+++.+++...+.+ +.+. .+|||+|++||++.++++.+++.||++++|+ ..++++|||++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~ 281 (320)
T cd00830 203 AEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKV-VVNLDRYGNTS 281 (320)
T ss_pred ccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHh-hhhHHhhCcHH
Confidence 01111345677777766554432 1121 4899999999999999999999999999999 48999999999
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
|||+|++|++++++|++++||+++|+++|+|+++
T Consensus 282 sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~ 315 (320)
T cd00830 282 AASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTW 315 (320)
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhh
Confidence 9999999999999999999999999999999984
No 14
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.91 E-value=5e-24 Score=189.27 Aligned_cols=152 Identities=17% Similarity=0.210 Sum_probs=119.9
Q ss_pred cceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccc
Q 041084 15 LANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPAS 93 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (225)
.+..+|||||+|+||++.+.. .+++++.+.+| +.++.+.++.++++. . . ..
T Consensus 154 ~~~~~~GDgAaA~ll~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~----~~ 205 (325)
T PRK12879 154 TTCILFGDGAGAVVLEATENE--------PGFIDYVLGTDGDGGDILYRTGLGTTM---------D-------R----DA 205 (325)
T ss_pred CceEEEeecceEEEEEecCCC--------CCeEEEEEEEcCCCCCeEEEcCCCCCC---------C-------c----cc
Confidence 367899999999999987643 36677888888 777777666433221 0 0 00
Q ss_pred cccceeeechhhhhHhhhhccch-------hhh---hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 94 KQLLFLENSVARTIFKMKINPYV-------PDF---KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 94 ~~~~~~~~m~g~~v~~~a~~~~~-------~~~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
......++++|+++++.+++.+. .+. .+|||+|++||+|.++++.+++.||++++|+. .++++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~-~~~~~~Gn~~s 284 (325)
T PRK12879 206 LSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTL-VSVEYYGNTSA 284 (325)
T ss_pred cccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhh-hhHhhhCchHH
Confidence 11123467888888776654422 211 58999999999999999999999999999995 68999999999
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
||+|++|++++++|++++||+++|++||+|++
T Consensus 285 as~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~ 316 (325)
T PRK12879 285 ATIPLALDLALEQGKIKPGDTLLLYGFGAGLT 316 (325)
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEEEchhhh
Confidence 99999999999999999999999999999998
No 15
>PLN03173 chalcone synthase; Provisional
Probab=99.90 E-value=6.2e-24 Score=194.50 Aligned_cols=76 Identities=29% Similarity=0.432 Sum_probs=67.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEeE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSWYELAYSEAK----GRIRKG---DRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip~~L~~~~~~----g~l~~G---d~vll~a~ 190 (225)
.+|||+|++||+|++|++.+.++||++++|+.. .++++||||||||+|++|++++++ +.+++| ++++++||
T Consensus 294 ~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~af 373 (391)
T PLN03173 294 DWNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGF 373 (391)
T ss_pred ccccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEe
Confidence 478999999999999999999999999999843 479999999999999999999963 444433 88999999
Q ss_pred cCCcc
Q 041084 191 GSGFN 195 (225)
Q Consensus 191 G~G~s 195 (225)
|+|||
T Consensus 374 GpG~t 378 (391)
T PLN03173 374 GPGLT 378 (391)
T ss_pred CchHH
Confidence 99999
No 16
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.90 E-value=5.6e-23 Score=182.20 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=116.6
Q ss_pred ceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCccccccc
Q 041084 16 ANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPASK 94 (225)
Q Consensus 16 t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 94 (225)
...+|||||+|+||++.+.. .+++.+.+.++ +.++.+.+|.+..+. .
T Consensus 153 ~~~~~GDGAaA~lL~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 200 (318)
T TIGR00747 153 TCVLFGDGAGAVVLGESEDP--------GGIISTHLGADGTQGEALYLPAGGRPT------------------------S 200 (318)
T ss_pred eEEEEecceeEEEEeecCCC--------CcEEEEEEEEcCCCcceEEECCCCcCC------------------------C
Confidence 57899999999999987643 24677778888 777777777532210 0
Q ss_pred ccceeeechhhhhHhhhhccc-------hhhh---hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccccc
Q 041084 95 QLLFLENSVARTIFKMKINPY-------VPDF---KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSS 164 (225)
Q Consensus 95 ~~~~~~~m~g~~v~~~a~~~~-------~~~~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sa 164 (225)
....++.++++++++..++.+ +.+. .+||++|++||++.++++.+++.||++++|+. .++++|||++||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~-~~~~~~Gn~~sa 279 (318)
T TIGR00747 201 GPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVV-KTVHKYGNTSAA 279 (318)
T ss_pred CCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHee-ehHhhhCCHHHH
Confidence 001234456666665554432 2222 47999999999999999999999999999995 799999999999
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 165 SSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 165 sip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
|+|++|++++++|++++||+|+++++|+|+++
T Consensus 280 s~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~ 311 (318)
T TIGR00747 280 SIPLALDELLRTGRIKPGDLLLLVAFGGGLTW 311 (318)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEEEehhhee
Confidence 99999999999999999999999999999983
No 17
>PRK06840 hypothetical protein; Validated
Probab=99.90 E-value=5.4e-23 Score=184.20 Aligned_cols=151 Identities=13% Similarity=0.149 Sum_probs=113.4
Q ss_pred eeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccccccc
Q 041084 19 LFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPASKQLL 97 (225)
Q Consensus 19 LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
+|||||+|+||++.+.. .+++++.+.+| +.++.+.+|.++++.+.... . .+...
T Consensus 162 ~~GDgAaA~ll~~~~~~--------~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~--------------~---~~~~~ 216 (339)
T PRK06840 162 NFAAGGSAALLKKDAGK--------NRILGSAIITDGSFSEDVRVPAGGTKQPASPE--------------T---VENRQ 216 (339)
T ss_pred cCCCceeEEEEEecCCC--------CceEEEEEEEcCCccceEEecCCCcCCCCccc--------------c---ccccc
Confidence 47999999999987542 36778888999 88888888865554321110 0 00011
Q ss_pred eeeechhhhhHhhh------------hccchhhh---hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccc
Q 041084 98 FLENSVARTIFKMK------------INPYVPDF---KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTS 162 (225)
Q Consensus 98 ~~~~m~g~~v~~~a------------~~~~~~~~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~ 162 (225)
+++.+.+...++.. ++.++.+. .+|||+|++||+|.++++.++++||++++|.. ++++||||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~--~~~~~Gn~~ 294 (339)
T PRK06840 217 HYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAI--YLDEYGHLG 294 (339)
T ss_pred ceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE--eHHhccchh
Confidence 23344444444322 22222222 58999999999999999999999999999983 689999999
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
||++|++|++++++|++++||+++|++||+|+++
T Consensus 295 sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~ 328 (339)
T PRK06840 295 QLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTW 328 (339)
T ss_pred hhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhhe
Confidence 9999999999999999999999999999999993
No 18
>PLN03168 chalcone synthase; Provisional
Probab=99.90 E-value=1.2e-23 Score=192.59 Aligned_cols=74 Identities=32% Similarity=0.535 Sum_probs=66.9
Q ss_pred hcccEEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEeE
Q 041084 121 LAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSWYELAYSEAKGRIRKG--------DRIWQVGF 190 (225)
Q Consensus 121 ~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip~~L~~~~~~g~l~~G--------d~vll~a~ 190 (225)
.|+++|++||+|++|++.+.++||++++|+.. .++++||||||||+|++|++++++ ++++| |+++|+||
T Consensus 294 ~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~af 372 (389)
T PLN03168 294 WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGF 372 (389)
T ss_pred cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEE
Confidence 57789999999999999999999999999953 379999999999999999999865 55554 89999999
Q ss_pred cCCcc
Q 041084 191 GSGFN 195 (225)
Q Consensus 191 G~G~s 195 (225)
|+|++
T Consensus 373 GpG~t 377 (389)
T PLN03168 373 GPGLT 377 (389)
T ss_pred cchhh
Confidence 99999
No 19
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.90 E-value=1.3e-23 Score=192.40 Aligned_cols=94 Identities=24% Similarity=0.390 Sum_probs=81.8
Q ss_pred chhhhhHhhhhccchhhh----------hhccc--EEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHH
Q 041084 102 SVARTIFKMKINPYVPDF----------KLAFE--HFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSW 167 (225)
Q Consensus 102 m~g~~v~~~a~~~~~~~~----------~~dId--~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip 167 (225)
++|+++++++.+.+.+.+ .+||| +|++||+|++|++.++++||++++|+.. .++++||||||||+|
T Consensus 270 ~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip 349 (391)
T PLN03169 270 KLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIV 349 (391)
T ss_pred EECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHH
Confidence 668888888876633332 25788 9999999999999999999999999942 589999999999999
Q ss_pred HHHHHHHHcCCCC---CCCEEEEEeEcCCcc
Q 041084 168 YELAYSEAKGRIR---KGDRIWQVGFGSGFN 195 (225)
Q Consensus 168 ~~L~~~~~~g~l~---~Gd~vll~a~G~G~s 195 (225)
++|++++++++++ +||+++|++||+|++
T Consensus 350 ~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 350 YVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred HHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 9999999888876 699999999999999
No 20
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.90 E-value=2.6e-23 Score=185.89 Aligned_cols=143 Identities=22% Similarity=0.205 Sum_probs=106.6
Q ss_pred cceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCcccccc
Q 041084 15 LANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPAS 93 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (225)
+...+|||||+|+||++.+.... . ..++.....++ +..+... . .
T Consensus 178 ~~~~~~GDGA~A~ll~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~-~-----------------------------~ 222 (338)
T PRK09258 178 FATLTLGSGAAAAVLTRGSLHPR--G---HRLLGGVTRAATEHHELCQ-G-----------------------------G 222 (338)
T ss_pred cceEEecccceEEEEecCCCCCC--c---ceeeeeeeecCCCcccccc-c-----------------------------C
Confidence 45789999999999998653210 0 23444444444 2221100 0 0
Q ss_pred cccceeeechhhhhHhhhhccchh---hh-------hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 94 KQLLFLENSVARTIFKMKINPYVP---DF-------KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 94 ~~~~~~~~m~g~~v~~~a~~~~~~---~~-------~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
+..+.++++.+++..+..+.. .+ .+|||+|++||+|.++++.++++||+|++|+. .++++||||+|
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~~~~~~lgl~~~k~~-~~~~~~GN~~s 298 (338)
T PRK09258 223 ---RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTRAILKALGIDPEKVF-TTFPTLGNMGP 298 (338)
T ss_pred ---ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHHHHHHHhCCCHHHce-ehHhhhCCcHH
Confidence 123456666666655543111 11 47999999999999999999999999999994 78999999999
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
||+|++|++++++|++++||+|++++||+|+++
T Consensus 299 as~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~ 331 (338)
T PRK09258 299 ASLPITLAMAAEEGFLKPGDRVALLGIGSGLNC 331 (338)
T ss_pred hHHHHHHHHHHHhCCCCCCCEEEEEEechhHhh
Confidence 999999999999999999999999999999984
No 21
>PLN03170 chalcone synthase; Provisional
Probab=99.89 E-value=1.9e-23 Score=191.96 Aligned_cols=164 Identities=21% Similarity=0.298 Sum_probs=109.0
Q ss_pred CccCcccCCC--CCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeeccccCeeeeecCccchhhhhccccc
Q 041084 1 MAVSFYTGND--RSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQKLQLCLSTRGRVLKNLIVVAGQVL 78 (225)
Q Consensus 1 ~s~~~~~~~d--~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd~~~~~~~~p~g~~~~~~~~~g~~~ 78 (225)
||.+|+.++| ++++++++||||||+|+||+++++.. +.. ..+.+.++ ...++|.. ...+.
T Consensus 198 ~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~------~~~-~~~~l~~~---~~~~~p~~--~~~~~------ 259 (401)
T PLN03170 198 TAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDER------VER-PLFQLVSA---SQTILPDS--EGAID------ 259 (401)
T ss_pred hhhccCCcccchhhhhhhhhhhhceeEEEEEecCCccc------ccC-CceEEeec---cceEecCC--ccccc------
Confidence 4677754443 45788999999999999999875421 000 01122232 11224421 10000
Q ss_pred cccccccCCcccccccccceeeechhhhhHhhhhccchhh-------h---hhcccEEEEecCCHHHHHHHHHHcCCCcC
Q 041084 79 KTHITAFEPLVLPASKQLLFLENSVARTIFKMKINPYVPD-------F---KLAFEHFCVHVGGKAVLDEMEKKVQLSEW 148 (225)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~-------~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e 148 (225)
+++...| +.+.+ .+++++.+.+.+.+. . .+||++|++||+|++|++.+.++||++++
T Consensus 260 -~~i~~~G-----------~~~~l-~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~ 326 (401)
T PLN03170 260 -GHLREVG-----------LTFHL-LKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKE 326 (401)
T ss_pred -ceEEcCC-----------eEEEE-ehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChH
Confidence 0111001 11222 344544443332111 1 37899999999999999999999999999
Q ss_pred cccc--cccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeEcCCcc
Q 041084 149 HMEP--MTLYRFGNTSSSSSWYELAYSE----AKGRIRKG---DRIWQVGFGSGFN 195 (225)
Q Consensus 149 ~~~~--~~~~~~GNt~sasip~~L~~~~----~~g~l~~G---d~vll~a~G~G~s 195 (225)
|+.. .++++||||||||+|++|++++ ++|++++| |+++|++||+||+
T Consensus 327 ~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 382 (401)
T PLN03170 327 RMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLT 382 (401)
T ss_pred HHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHh
Confidence 9832 6899999999999999999997 46888888 8999999999999
No 22
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.88 E-value=2.7e-23 Score=187.83 Aligned_cols=77 Identities=57% Similarity=0.934 Sum_probs=72.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccc--ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHME--PMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~--~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
.+|||+|++||+|+++++.++++||++++|+. ..++++||||+|||+|++|++++++|++++||+|++++||+|+++
T Consensus 278 ~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~ 356 (361)
T cd00831 278 KLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTC 356 (361)
T ss_pred cccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCcee
Confidence 47999999999999999999999999999983 268999999999999999999999999999999999999999984
No 23
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.88 E-value=6.3e-22 Score=175.38 Aligned_cols=147 Identities=24% Similarity=0.293 Sum_probs=113.8
Q ss_pred ceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeecCccchhhhhccccccccccccCCccccccc
Q 041084 16 ANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPASK 94 (225)
Q Consensus 16 t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 94 (225)
+..+|||||+|+||++++.+ +++.+.+.++ +..+.+..|.+.+... ..
T Consensus 154 ~~~~~gDGaaA~ll~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~- 202 (319)
T PRK09352 154 TCVLFGDGAGAVVLGASEEP---------GILSTHLGSDGSYGDLLYLPGGGSRGP---------------------AS- 202 (319)
T ss_pred ceEEEeccceEEEEEEcCCC---------CeEEEEEEEcCCCCCeEEeCCCCCCCC---------------------CC-
Confidence 57899999999999987641 4567778888 6666666664322100 00
Q ss_pred ccceeeechhhhhHhhhhcc-------chhhh---hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccccc
Q 041084 95 QLLFLENSVARTIFKMKINP-------YVPDF---KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSS 164 (225)
Q Consensus 95 ~~~~~~~m~g~~v~~~a~~~-------~~~~~---~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sa 164 (225)
..++.++++++++...+. .+.+. .+|||+|++||+|.++++.+++.||+|++++ ..++.+|||+++|
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a 279 (319)
T PRK09352 203 --PGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAA 279 (319)
T ss_pred --CCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHH
Confidence 113456666665544432 12222 4799999999999999999999999999999 4789999999999
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 165 SSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 165 sip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
++++.|++++++|++++||++++++||+|+++
T Consensus 280 ~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~ 311 (319)
T PRK09352 280 SIPLALDEAVRDGRIKRGDLVLLEGFGGGLTW 311 (319)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEEEchhhee
Confidence 99999999999999999999999999999983
No 24
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.87 E-value=1.5e-21 Score=177.29 Aligned_cols=155 Identities=17% Similarity=0.180 Sum_probs=106.2
Q ss_pred ceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeeccccCeeeeecCccchhhhhccccccccccccCCcccccccc
Q 041084 16 ANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQKLQLCLSTRGRVLKNLIVVAGQVLKTHITAFEPLVLPASKQ 95 (225)
Q Consensus 16 t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd~~~~~~~~p~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 95 (225)
+.++|||||+|+||++.+....+.. ..++.+.+.++ ..+.+..+.|... . . .+.. ...
T Consensus 196 ~~~lfGDgAaA~vL~~~~~~~~~~~---~~il~~~~~~~-~~~~~~~~~G~~~----------~--~---~~~~---~~~ 253 (372)
T PRK07515 196 SHFIFGDVATAVIVERADTATSAGG---FEILGTRLFTQ-FSNNIRNNFGFLN----------R--A---DPEG---IGA 253 (372)
T ss_pred CCEEecCccEEEEEeeccccccCCC---ceEEEEEeecc-cccceecCCCCCC----------C--C---Cccc---ccc
Confidence 6899999999999998654211111 14555555444 1232332221100 0 0 0000 001
Q ss_pred cceeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHH-cC--CCcCcccccccccccccc
Q 041084 96 LLFLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKK-VQ--LSEWHMEPMTLYRFGNTS 162 (225)
Q Consensus 96 ~~~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~-lg--l~~e~~~~~~~~~~GNt~ 162 (225)
....+.|+|+.+|++++..+...+ .+|||+|++||+|.++++.+.++ || +++++. +.++++||||+
T Consensus 254 ~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~-~~~~~~~GNt~ 332 (372)
T PRK07515 254 RDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLGRDATPEEA-PVILDEYANTS 332 (372)
T ss_pred ccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhccCCCChhhc-eEeHHhcCCch
Confidence 113467899888877766533332 47999999999999999999988 55 455666 47899999999
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
|||+|++|+++. +++++||+|+|++||+|++
T Consensus 333 sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~ 363 (372)
T PRK07515 333 SAGSIIAFHKHS--DDLAAGDLGVICSFGAGYS 363 (372)
T ss_pred hhHHHHHHHHHh--ccCCCCCEEEEEEecccHH
Confidence 999999999984 5789999999999999998
No 25
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.86 E-value=1.3e-21 Score=178.29 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=82.1
Q ss_pred eeeechhhhhHhhhhccchhhh----------hhcccEEEEecCCHHHHHHHHHHc-----CCCcCcccccccccccccc
Q 041084 98 FLENSVARTIFKMKINPYVPDF----------KLAFEHFCVHVGGKAVLDEMEKKV-----QLSEWHMEPMTLYRFGNTS 162 (225)
Q Consensus 98 ~~~~m~g~~v~~~a~~~~~~~~----------~~dId~~i~Hq~~~~i~~~v~~~l-----gl~~e~~~~~~~~~~GNt~ 162 (225)
+.++|+++.+++.....+...+ .+|||+|++||+|.++++.++++| |+|++|+ +.++++||||+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~-~~~~~~~GNt~ 335 (378)
T PRK06816 257 LSLKQDVRLLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW-FTNLATVGNTG 335 (378)
T ss_pred chHHhHHHHHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe-EEecccccccc
Confidence 3567788777665544311111 489999999999999999999988 9999999 48999999999
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCC-cc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSG-FN 195 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G-~s 195 (225)
|||+|++|++++++|++++||+|++++.|+| ++
T Consensus 336 sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s~~~~ 369 (378)
T PRK06816 336 SASIYIMLDELLNSGRLKPGQKILCFVPESGRFS 369 (378)
T ss_pred chHHHHHHHHHHHcCCCCCCCEEEEEEecccchh
Confidence 9999999999999999999999999988777 44
No 26
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.86 E-value=8e-22 Score=181.09 Aligned_cols=75 Identities=20% Similarity=0.283 Sum_probs=67.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEeEcC
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSWYELAYSEAKGR--IRKG---DRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip~~L~~~~~~g~--l~~G---d~vll~a~G~ 192 (225)
.+||+|+ +||+|++|++.++++||++++|+.. .++++||||+|||+|++|++++++++ +++| |+++|++||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 4778766 6999999999999999999999942 47999999999999999999998774 6788 9999999999
Q ss_pred Ccc
Q 041084 193 GFN 195 (225)
Q Consensus 193 G~s 195 (225)
|++
T Consensus 384 Glt 386 (399)
T PLN03171 384 GLT 386 (399)
T ss_pred cHH
Confidence 999
No 27
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=2.1e-21 Score=169.15 Aligned_cols=166 Identities=21% Similarity=0.324 Sum_probs=113.2
Q ss_pred CccCcccCCCCC-CccceeeeecceeeeEEeccCCC-CCCCcccccceEEEEeeeccccCeeeeecCccchhhhhccccc
Q 041084 1 MAVSFYTGNDRS-MVLANGLFREGDAAILLSNRSSD-RGRSKYELTHTLRTMCRRQKLQLCLSTRGRVLKNLIVVAGQVL 78 (225)
Q Consensus 1 ~s~~~~~~~d~~-~~~t~~LFGDGAaAvvL~~~~~~-~~~~~~~~~~i~~~~~~sd~~~~~~~~p~g~~~~~~~~~g~~~ 78 (225)
||++|+..+|.. +++...|||||+||+|++.+... ..++. + ..++++ .+-.+|. +.+.|.|
T Consensus 168 CSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~-~-p~i~~s--------~StL~~d--se~~Mgw----- 230 (356)
T COG3424 168 CSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPL-R-PDILDS--------FSTLYPD--SEDIMGW----- 230 (356)
T ss_pred eeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCC-C-ceeccc--------ccccCCc--cccccce-----
Confidence 899999888877 99999999999999999986431 11111 0 122221 1222222 2223333
Q ss_pred cccccccCCcccccccccceeeechhhhhHhhhhc----cchhh---hhhcccEEEEecCCHHHHHHHHHHcCCCcCccc
Q 041084 79 KTHITAFEPLVLPASKQLLFLENSVARTIFKMKIN----PYVPD---FKLAFEHFCVHVGGKAVLDEMEKKVQLSEWHME 151 (225)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~----~~~~~---~~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~ 151 (225)
++.+.|..+. .+.+. ..+++..+. .++.. ..+||+.|+.|++++++++++.+.||+++++..
T Consensus 231 --dv~d~G~~~v-lSrdl--------p~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~ 299 (356)
T COG3424 231 --DVGDQGLKVV-LSRDL--------PNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALE 299 (356)
T ss_pred --eecCCcEEEE-EcCch--------hHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHH
Confidence 1222222111 12221 122222222 11211 258999999999999999999999999999873
Q ss_pred --ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 152 --PMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 152 --~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+..+++||||+|||+++.|.+.++++ .++|++.++.|||+||+
T Consensus 300 ~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~ 344 (356)
T COG3424 300 LSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFC 344 (356)
T ss_pred HHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcce
Confidence 27899999999999999999999986 68999999999999998
No 28
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.81 E-value=3.8e-20 Score=135.86 Aligned_cols=76 Identities=37% Similarity=0.599 Sum_probs=68.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
.+|||++++||.|.++++.+++.+|++++++ +.++++|||+++||+|++|++++++|++++||+|+++++|+|+++
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~ 83 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSW 83 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhhee
Confidence 4899999999999999999999999999999 478999999999999999999999999999999999999999983
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.80 E-value=1.7e-19 Score=162.61 Aligned_cols=73 Identities=22% Similarity=0.213 Sum_probs=68.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc--cccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT--LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~--~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
.+|||+|++||+|.++++.++++||++++|+. .+ .++||||+|||+|++|+++++ ++++||+|+|++||+|++
T Consensus 225 ~~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~-~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s 299 (345)
T TIGR00748 225 PEDFDYAVFHQPNGKFYLVAARMLGFPKEQVK-PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAG 299 (345)
T ss_pred HHHcCEEEeCCCChHHHHHHHHHcCCCHHHee-ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcc
Confidence 58999999999999999999999999999994 53 489999999999999999986 689999999999999998
No 30
>PRK04262 hypothetical protein; Provisional
Probab=99.78 E-value=4.4e-19 Score=159.87 Aligned_cols=74 Identities=26% Similarity=0.270 Sum_probs=68.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
.+|||+|++||+|.++++.++++||++++|+... ++++||||+|||+|++|+++++ ++++||+|+|++||+|++
T Consensus 226 ~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~ 300 (347)
T PRK04262 226 PSDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAG 300 (347)
T ss_pred HHHhceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcc
Confidence 5899999999999999999999999999999422 4799999999999999999987 489999999999999998
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.78 E-value=1.1e-18 Score=154.62 Aligned_cols=76 Identities=26% Similarity=0.392 Sum_probs=71.2
Q ss_pred hcccEEEEecCCH-HHHHHHHHHcCCCcCccccc---ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 121 LAFEHFCVHVGGK-AVLDEMEKKVQLSEWHMEPM---TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 121 ~dId~~i~Hq~~~-~i~~~v~~~lgl~~e~~~~~---~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
+||++|++||+|. .+++.++++|+++++++... ++++||||++|++|++|+++++++++++||+|+++++|+|++.
T Consensus 240 ~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~ 319 (324)
T cd00827 240 EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTA 319 (324)
T ss_pred cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhh
Confidence 5899999999999 99999999999998888533 6999999999999999999999999999999999999999983
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.66 E-value=3.4e-16 Score=142.97 Aligned_cols=76 Identities=25% Similarity=0.246 Sum_probs=63.5
Q ss_pred hhcccEEEEecCCHHHH----HHHHHHcCCCc-Cccc------ccccccccccccchHHHHHHHHHHcC-CCCCCCEEEE
Q 041084 120 KLAFEHFCVHVGGKAVL----DEMEKKVQLSE-WHME------PMTLYRFGNTSSSSSWYELAYSEAKG-RIRKGDRIWQ 187 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~----~~v~~~lgl~~-e~~~------~~~~~~~GNt~sasip~~L~~~~~~g-~l~~Gd~vll 187 (225)
.+|||+|++||++.++. +.+.+.++++. +++. ..+.+++|||+|||+|++|.++++++ ++++||+|+|
T Consensus 222 ~~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill 301 (379)
T TIGR01835 222 LADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGL 301 (379)
T ss_pred HHHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEE
Confidence 58999999999988773 34667777774 2231 13689999999999999999999986 7999999999
Q ss_pred EeEcCCcc
Q 041084 188 VGFGSGFN 195 (225)
Q Consensus 188 ~a~G~G~s 195 (225)
++||+|+.
T Consensus 302 ~s~GsG~~ 309 (379)
T TIGR01835 302 FSYGSGAV 309 (379)
T ss_pred EEecCCcc
Confidence 99999999
No 33
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.59 E-value=2.9e-15 Score=120.49 Aligned_cols=76 Identities=26% Similarity=0.445 Sum_probs=62.9
Q ss_pred hcccEEEEecCCHHHHHHHHHHcCCCcCcccc--cccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEeEc
Q 041084 121 LAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP--MTLYRFGNTSSSSSWYELAYSEA----KGRIRK---GDRIWQVGFG 191 (225)
Q Consensus 121 ~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~--~~~~~~GNt~sasip~~L~~~~~----~g~l~~---Gd~vll~a~G 191 (225)
.|+.+|++|+++++|++.+.+.|+|+++++.+ .++++||||+|++++++|+++++ +|.... +++++++|||
T Consensus 58 ~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afG 137 (151)
T PF02797_consen 58 WDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFG 137 (151)
T ss_dssp GGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEE
T ss_pred cccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEEC
Confidence 35679999999999999999999999999854 78999999999999999999988 344332 5899999999
Q ss_pred CCccc
Q 041084 192 SGFNT 196 (225)
Q Consensus 192 ~G~s~ 196 (225)
+|+++
T Consensus 138 PG~t~ 142 (151)
T PF02797_consen 138 PGLTI 142 (151)
T ss_dssp TTTEE
T ss_pred CcceE
Confidence 99993
No 34
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.50 E-value=3e-15 Score=131.10 Aligned_cols=99 Identities=49% Similarity=0.769 Sum_probs=89.2
Q ss_pred CccCcccCCCCCCccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec-cccCeeeeec--------Cccchhh
Q 041084 1 MAVSFYTGNDRSMVLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ-KLQLCLSTRG--------RVLKNLI 71 (225)
Q Consensus 1 ~s~~~~~~~d~~~~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd-~~~~~~~~p~--------g~~~~~~ 71 (225)
+|.+||.++|++++++++||+|||||+||++.+....+.+|++.+.++++.++| +.|.|+...+ .++|+++
T Consensus 175 ~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~~g~~Gv~lsk~l~ 254 (290)
T PF08392_consen 175 ISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDEEGIVGVSLSKDLM 254 (290)
T ss_pred cccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcCCCceEEEEecchH
Confidence 588999999999999999999999999999998766677999999999999988 9999998775 5688999
Q ss_pred hhccccccccccccCCccccccccccee
Q 041084 72 VVAGQVLKTHITAFEPLVLPASKQLLFL 99 (225)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 99 (225)
..+|..++.|++.++|.+.|+++..++.
T Consensus 255 ~vag~al~~ni~~l~p~vLP~sE~~~~~ 282 (290)
T PF08392_consen 255 KVAGKALKANITTLGPLVLPLSEQLRFA 282 (290)
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 9999999999999999999988775543
No 35
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.34 E-value=2.9e-12 Score=119.53 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=72.6
Q ss_pred eeechhhhhHhhhhccchhhh----------------hhcccEEEEecCCHHHHHHHHHHcCCC----------------
Q 041084 99 LENSVARTIFKMKINPYVPDF----------------KLAFEHFCVHVGGKAVLDEMEKKVQLS---------------- 146 (225)
Q Consensus 99 ~~~m~g~~v~~~a~~~~~~~~----------------~~dId~~i~Hq~~~~i~~~v~~~lgl~---------------- 146 (225)
+..|+|+.+++..++.+...+ .+|+|++++||+..+|..+..+.|.+.
T Consensus 201 ~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~ 280 (459)
T PLN02577 201 YPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEK 280 (459)
T ss_pred ceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhc
Confidence 356788777776666532221 368999999999998888766666421
Q ss_pred ------------------------------cCcccc--cccccccccccchHHHHHHHHHHcCC-CCCCCEEEEEeEcCC
Q 041084 147 ------------------------------EWHMEP--MTLYRFGNTSSSSSWYELAYSEAKGR-IRKGDRIWQVGFGSG 193 (225)
Q Consensus 147 ------------------------------~e~~~~--~~~~~~GNt~sasip~~L~~~~~~g~-l~~Gd~vll~a~G~G 193 (225)
.+|+.+ ..-++.||+.++|+++.|..+++... ..+|++|+|+++|+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG 360 (459)
T PLN02577 281 LAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSG 360 (459)
T ss_pred cccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCC
Confidence 033333 24478999999999999999998653 459999999999999
Q ss_pred cc
Q 041084 194 FN 195 (225)
Q Consensus 194 ~s 195 (225)
+.
T Consensus 361 ~~ 362 (459)
T PLN02577 361 LT 362 (459)
T ss_pred cc
Confidence 99
No 36
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.34 E-value=1.1e-12 Score=111.83 Aligned_cols=76 Identities=17% Similarity=0.111 Sum_probs=68.4
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccc----ccccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHME----PMTLYRFGNTSSSSSWYELAYSEAKGRIR-------KGDRIWQV 188 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~----~~~~~~~GNt~sasip~~L~~~~~~g~l~-------~Gd~vll~ 188 (225)
.+|||+|++||.+..+.+.+.+.+++++++.. ..+..+|||+++||.++.|.+++++.+.+ +|++++++
T Consensus 162 ~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (254)
T cd00327 162 PSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLL 241 (254)
T ss_pred HHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEe
Confidence 58999999999999999999999999887763 36778999999999999999998876665 89999999
Q ss_pred eEcCCcc
Q 041084 189 GFGSGFN 195 (225)
Q Consensus 189 a~G~G~s 195 (225)
++|+|.+
T Consensus 242 ~~g~Gg~ 248 (254)
T cd00327 242 GFGLGGT 248 (254)
T ss_pred eEcCCCc
Confidence 9999987
No 37
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.32 E-value=6.1e-12 Score=113.62 Aligned_cols=75 Identities=25% Similarity=0.297 Sum_probs=68.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc--ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM--TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~--~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
.+|+|++++||++.++-...++.++.+++++.+. ..++.||+.++|+++.|..+++..+ ++||+|++++||+|..
T Consensus 226 ~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~ 302 (377)
T COG3425 226 PDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAG 302 (377)
T ss_pred hhhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcc
Confidence 5899999999999999999999999998888763 3357999999999999999999766 7999999999999988
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.22 E-value=8.9e-12 Score=110.45 Aligned_cols=76 Identities=21% Similarity=0.103 Sum_probs=65.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCc----ccccccccccccccchHHHHHHHHHHcCCCC---------------
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWH----MEPMTLYRFGNTSSSSSWYELAYSEAKGRIR--------------- 180 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~----~~~~~~~~~GNt~sasip~~L~~~~~~g~l~--------------- 180 (225)
.+|||++++||.+.++.+.+.++++++.++ ....+..+|||+++||.++.|.++++..+.+
T Consensus 222 ~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~ 301 (332)
T cd00825 222 VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG 301 (332)
T ss_pred HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc
Confidence 589999999999999999988888777664 1136789999999999999999998866555
Q ss_pred ----------CCCEEEEEeEcCCcc
Q 041084 181 ----------KGDRIWQVGFGSGFN 195 (225)
Q Consensus 181 ----------~Gd~vll~a~G~G~s 195 (225)
+|++++++++|.|.+
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~G~Gg~ 326 (332)
T cd00825 302 LNIVTETTPRELRTALLNGFGLGGT 326 (332)
T ss_pred CcccCCCCCCCCCEEEEeeecCCCe
Confidence 789999999999988
No 39
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=98.83 E-value=1.3e-08 Score=95.13 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=57.9
Q ss_pred hhcccEEEEecCCHHHHHHHHH-Hc----CCC-----------------------------------------cCccccc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEK-KV----QLS-----------------------------------------EWHMEPM 153 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~-~l----gl~-----------------------------------------~e~~~~~ 153 (225)
.+|+|++++|++..+|..+... .+ ... .+|+.+.
T Consensus 240 ~~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps 319 (454)
T TIGR01833 240 LNDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPS 319 (454)
T ss_pred HhHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcch
Confidence 5899999999998888776422 21 111 1344332
Q ss_pred --ccccccccccchHHHHHHHHHHcCC--CCCCCEEEEEeEcCCcc
Q 041084 154 --TLYRFGNTSSSSSWYELAYSEAKGR--IRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 154 --~~~~~GNt~sasip~~L~~~~~~g~--l~~Gd~vll~a~G~G~s 195 (225)
.-++.||+.++|+++.|..+++..+ ...|++|+|+++|+|..
T Consensus 320 ~~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~ 365 (454)
T TIGR01833 320 LLVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLA 365 (454)
T ss_pred hHHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcc
Confidence 3368999999999999999998543 56899999999999998
No 40
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=97.99 E-value=1.4e-05 Score=74.23 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=58.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccc------ccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTL------YRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~------~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
.+|||+|-+|++.........+.+|++.+++.+ +. +-+|++|+..++.++.++.++| .+.| .+.+++.|
T Consensus 332 ~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~-~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g-~~~G-l~~~c~~G 406 (417)
T PRK06025 332 KDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNV-NGGAIALGHPIGATGSILIGTVLDELERRG-LKRG-LVTMCAAG 406 (417)
T ss_pred HHHCcEEEEchHHHHHHHHHHHHcCCChhhccc-cCCHHhcCCchhHHHHHHHHHHHHHHHHhC-CCeE-EEEEEeec
Confidence 589999999999999988999999999988853 33 4889999999999999998876 6778 66665554
No 41
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=97.51 E-value=0.00014 Score=66.44 Aligned_cols=57 Identities=7% Similarity=-0.028 Sum_probs=50.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-----ccccccccccchHHHHHHHHHHc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-----TLYRFGNTSSSSSWYELAYSEAK 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-----~~~~~GNt~sasip~~L~~~~~~ 176 (225)
.+|||+|.+||+.........+.||++++++.+. ..+.+|+||+.+++..+.++.++
T Consensus 275 ~~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~ 336 (361)
T PRK06690 275 VEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE 336 (361)
T ss_pred HHHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999888521 27899999999999999998764
No 42
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.31 E-value=0.00011 Score=52.62 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=25.3
Q ss_pred ccceeeeecceeeeEEeccCCCCCCCcccccceEEEEeeec
Q 041084 14 VLANGLFREGDAAILLSNRSSDRGRSKYELTHTLRTMCRRQ 54 (225)
Q Consensus 14 ~~t~~LFGDGAaAvvL~~~~~~~~~~~~~~~~i~~~~~~sd 54 (225)
..+..+|||||+|+||++.++.. .+++++.+.||
T Consensus 46 ~~~~~~~gDgAaA~vl~~~~~~~-------~~il~~~~~td 79 (80)
T PF08545_consen 46 RQTAFIFGDGAAAVVLSRDEEGG-------FGILDSHLRTD 79 (80)
T ss_dssp HHHHTTB-EEEEEEEEEEESSSS-------CEEEEEEEEE-
T ss_pred cCcceeecchheEEEEEecCCCC-------CeEEEEEEEcC
Confidence 34778999999999999985332 37888888876
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=97.06 E-value=0.004 Score=56.44 Aligned_cols=73 Identities=7% Similarity=-0.101 Sum_probs=48.4
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCCcCcc-cccccccccccccchHHHHHHHHHH--cCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLSEWHM-EPMTLYRFGNTSSSSSWYELAYSEA--KGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~~e~~-~~~~~~~~GNt~sasip~~L~~~~~--~g~l~~Gd~vll~a~G 191 (225)
.+|||++..|.-+....+ .+.+.++-..+.. ...+-..+||+++|+-++.+..++. +...-+|+++|+++-.
T Consensus 251 ~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 251 LEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSD 330 (348)
T ss_pred HHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecC
Confidence 589999999988665533 2344455332222 1245678999999998888776443 2344579998888764
Q ss_pred C
Q 041084 192 S 192 (225)
Q Consensus 192 ~ 192 (225)
-
T Consensus 331 d 331 (348)
T PRK06147 331 D 331 (348)
T ss_pred C
Confidence 3
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=96.49 E-value=0.031 Score=50.32 Aligned_cols=77 Identities=12% Similarity=0.043 Sum_probs=47.5
Q ss_pred hhcccEEEE---ecCCHHHHHHHHHHcCCCcCccccc----cc---c--cccccccchHHHHHHHHHHcCCCCCC--CEE
Q 041084 120 KLAFEHFCV---HVGGKAVLDEMEKKVQLSEWHMEPM----TL---Y--RFGNTSSSSSWYELAYSEAKGRIRKG--DRI 185 (225)
Q Consensus 120 ~~dId~~i~---Hq~~~~i~~~v~~~lgl~~e~~~~~----~~---~--~~GNt~sasip~~L~~~~~~g~l~~G--d~v 185 (225)
++|.|.++. -..+..++..+.++-|++.++...+ .+ . .-|-.|.++-..++.-.+-. +++.| .+|
T Consensus 219 ~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~-~~~~g~~~r~ 297 (327)
T TIGR02845 219 VDDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTYGHILK-EMLRGKLKKV 297 (327)
T ss_pred hhhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHHHHHHH-HHhcCcceEE
Confidence 578898887 4457788888988888776543111 11 1 22555555554444433321 33444 579
Q ss_pred EEEeEcCCcccc
Q 041084 186 WQVGFGSGFNTI 197 (225)
Q Consensus 186 ll~a~G~G~s~~ 197 (225)
|+++.|+=+|-+
T Consensus 298 l~v~tgalls~~ 309 (327)
T TIGR02845 298 LVVATGALLSPT 309 (327)
T ss_pred EEEEchhhcCcc
Confidence 999999988844
No 45
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=96.36 E-value=0.0066 Score=55.40 Aligned_cols=40 Identities=30% Similarity=0.313 Sum_probs=36.0
Q ss_pred ccccccccchHHHHHHHHHHcC--CCCCCCEEEEEeEcCCcc
Q 041084 156 YRFGNTSSSSSWYELAYSEAKG--RIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 156 ~~~GNt~sasip~~L~~~~~~g--~l~~Gd~vll~a~G~G~s 195 (225)
++.|||.++|+...|..++... .--.|++|+++++|+|+.
T Consensus 327 ~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlA 368 (462)
T KOG1393|consen 327 RRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLA 368 (462)
T ss_pred ccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcch
Confidence 5889999999999999999875 445799999999999999
No 46
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.32 E-value=0.0026 Score=56.22 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=32.8
Q ss_pred cccccccccchHHHHHHHHH--HcCCCCCCCEEEEEeEcCCcc
Q 041084 155 LYRFGNTSSSSSWYELAYSE--AKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 155 ~~~~GNt~sasip~~L~~~~--~~g~l~~Gd~vll~a~G~G~s 195 (225)
-++.|||.+||+.++|..++ .......|++|+|+++|+|+.
T Consensus 151 ~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~ 193 (282)
T PF08540_consen 151 SRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLA 193 (282)
T ss_dssp HHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTE
T ss_pred HHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcc
Confidence 36889999999999999999 344445799999999999998
No 47
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=95.27 E-value=0.1 Score=47.52 Aligned_cols=60 Identities=10% Similarity=0.011 Sum_probs=38.8
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCCcCcccc-cccccccccccchHHHHHHHH---HHcCCC
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAYS---EAKGRI 179 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~~---~~~g~l 179 (225)
.+|||++.+|..+....+ .+.+.++-..+++.. ..-..+||+.+||-.+.|..+ +++|.+
T Consensus 292 ~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 360 (406)
T cd00834 292 PEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVL 360 (406)
T ss_pred HHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCc
Confidence 689999999987764433 455556654344422 344678999998877776654 445543
No 48
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=95.00 E-value=0.13 Score=47.83 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=37.4
Q ss_pred hhcccEEEEecCCHHHHHH-----HHHHcCCCcCcccc-cccccccccccchHHHHHHH---HHHcCCCCC
Q 041084 120 KLAFEHFCVHVGGKAVLDE-----MEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY---SEAKGRIRK 181 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~-----v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~---~~~~g~l~~ 181 (225)
.+|||++..|-.+....+. +.+.++-...++.. ..-..+||+.+|+=.+.+.. ++++|.+.|
T Consensus 306 p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp 376 (425)
T PRK06501 306 PEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPP 376 (425)
T ss_pred HHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCC
Confidence 6899999999887655443 34555532223311 34457799988876555533 345555543
No 49
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=94.11 E-value=0.12 Score=47.38 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=34.9
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCC--cCcccccccccccccccchHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLS--EWHMEPMTLYRFGNTSSSSSWYELAYSE 174 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~--~e~~~~~~~~~~GNt~sasip~~L~~~~ 174 (225)
.+|||++..|..+....+ .+.+.++-. +-.+ ..+-..+||+.+|+-++.|...+
T Consensus 291 ~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v-~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 291 LDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPV-TAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred HHHcCEEecccccCccccHHHHHHHHHHHhccCCCcee-ecccchhccchhhhhHHHHHHHH
Confidence 689999999966553322 333444432 2223 25667899999999888776543
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=93.78 E-value=0.19 Score=46.27 Aligned_cols=75 Identities=11% Similarity=-0.013 Sum_probs=48.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeEcCCc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQ-VGFGSGF 194 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll-~a~G~G~ 194 (225)
.+|||++-+|-.-........+.||+..+++.+. ..-.+||...|+=...+.++..+-+.+.+.+.+. ++.|.|.
T Consensus 308 ~~dId~~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~gG~ 384 (393)
T PRK05656 308 LAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQ 384 (393)
T ss_pred HHHCCEEEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEEEEEcccCcc
Confidence 6899999999876666667789999987776432 2345799977776666666665433333333322 3444444
No 51
>PRK08256 lipid-transfer protein; Provisional
Probab=93.33 E-value=0.67 Score=42.57 Aligned_cols=77 Identities=12% Similarity=-0.028 Sum_probs=54.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------ccccccc--ccccccccchHHHHHHHHHHc--C
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMTL--YRFGNTSSSSSWYELAYSEAK--G 177 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~~--~~~GNt~sasip~~L~~~~~~--g 177 (225)
.+|||.+-+|..-....-...+.||+.++ .+. .+. -.+||...|+=...+.++..+ |
T Consensus 281 ~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN-~~GG~ls~Ghp~gasG~~~~~e~~~QL~g 359 (391)
T PRK08256 281 PEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVN-PSGGLLSKGHPLGATGLAQCAELTWQLRG 359 (391)
T ss_pred HHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeC-CCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 58999999999988888888899999987 443 222 246898877666666666552 2
Q ss_pred -----CCCCCCEEEEEeEcCCcccc
Q 041084 178 -----RIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 178 -----~l~~Gd~vll~a~G~G~s~~ 197 (225)
+++.....+..+.|.|.+.+
T Consensus 360 ~ag~~Qv~~~~~~l~~~~G~~~~~~ 384 (391)
T PRK08256 360 TAGARQVEGARLALQHNLGLGGACV 384 (391)
T ss_pred CcCCCcCCccceEEEeccccceeEE
Confidence 34456677778888775543
No 52
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=93.27 E-value=0.24 Score=45.38 Aligned_cols=56 Identities=9% Similarity=-0.109 Sum_probs=39.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-......-...+.||+.+..+.+. -.-.+||...|+=...+.++..
T Consensus 302 ~~did~~e~~d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~ 358 (386)
T cd00751 302 LDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLH 358 (386)
T ss_pred HHHcCEEEeechhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHH
Confidence 5899999999887666566678999877555321 1235789888776666666655
No 53
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=93.15 E-value=0.26 Score=45.39 Aligned_cols=76 Identities=13% Similarity=-0.002 Sum_probs=50.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQ-VGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll-~a~G~G~s 195 (225)
.+|||++=+|-.-....-...+.||+.++++.+. -.-.+||...||=...+.++..+=+-+.|...+. ++.|.|..
T Consensus 308 ~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g 385 (394)
T PLN02644 308 ASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGA 385 (394)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCce
Confidence 5899999998887777677789999988877531 1235688877777666666665322234555544 44444443
No 54
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=93.02 E-value=0.43 Score=43.84 Aligned_cols=54 Identities=7% Similarity=-0.020 Sum_probs=33.1
Q ss_pred hhcccEEEEecCCHH-----HHHHHHHHcCCCc---Ccccc-cccccccccccchHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKA-----VLDEMEKKVQLSE---WHMEP-MTLYRFGNTSSSSSWYELAYS 173 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~-----i~~~v~~~lgl~~---e~~~~-~~~~~~GNt~sasip~~L~~~ 173 (225)
.+|||++.+|-.+.. -.+.+.+.++... .++.. ..-..+||+.+|+-.+.|..+
T Consensus 296 ~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 358 (424)
T smart00825 296 PADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKV 358 (424)
T ss_pred HHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHH
Confidence 689999999955433 2335556665422 22311 334567999998876666554
No 55
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=92.79 E-value=0.35 Score=44.89 Aligned_cols=53 Identities=8% Similarity=0.020 Sum_probs=36.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAY 172 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~ 172 (225)
.+|||+|=+|-.-....-...+.||++++++.+.- .--+||...||=...+.+
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~ 370 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGT 370 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHH
Confidence 58999999998877776778899999988875311 123566655544444333
No 56
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=92.58 E-value=0.55 Score=43.26 Aligned_cols=69 Identities=9% Similarity=-0.051 Sum_probs=46.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHHHHHcCCCCCCCEEEEE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQV 188 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~ 188 (225)
.+|||++=+|-.-....-...+.||+.++++.+.= .--+||-..|+=...+.++..+=+.+.+.+.+..
T Consensus 309 ~~dId~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~ 378 (394)
T PRK06445 309 VKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVAT 378 (394)
T ss_pred HHHcCEEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEEE
Confidence 58999999999988877788899999998875411 1235777666666665655553233444454443
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=92.26 E-value=1 Score=41.05 Aligned_cols=53 Identities=9% Similarity=0.042 Sum_probs=33.8
Q ss_pred hhcccEEEEecCCH-----HHHHHHHHHcCCCcCcccc-cccccccccccchHHHHHHH
Q 041084 120 KLAFEHFCVHVGGK-----AVLDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY 172 (225)
Q Consensus 120 ~~dId~~i~Hq~~~-----~i~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~ 172 (225)
.+|||++.+|-.+. .-...+.+.++-...++.. ..-..+||+.+||=.+.+..
T Consensus 292 ~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~ 350 (407)
T TIGR03150 292 PEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIF 350 (407)
T ss_pred HhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHH
Confidence 68999999998776 3344566777754444421 23356799877765544444
No 58
>PRK09051 beta-ketothiolase; Provisional
Probab=91.97 E-value=0.64 Score=42.96 Aligned_cols=55 Identities=7% Similarity=-0.011 Sum_probs=40.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++=+|-.-....-...+.||+.++++.+ +.. -+||...||=...+.+++.
T Consensus 309 ~~did~~ei~d~f~~~~~~~~e~lg~~~~~vN~-~GG~~a~Ghp~gAsG~~~~~~~~~ 365 (394)
T PRK09051 309 VADLDVIEANEAFAAQACAVTRELGLDPAKVNP-NGSGISLGHPVGATGAIITVKALY 365 (394)
T ss_pred HHHcCEEEecCccHHHHHHHHHHhCCCccccCC-CccHHHhcchHHHHHHHHHHHHHH
Confidence 589999999988666666677999998887743 332 4799887776666666555
No 59
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=91.97 E-value=0.54 Score=43.04 Aligned_cols=56 Identities=7% Similarity=-0.060 Sum_probs=42.6
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.||+.++++.+.= .-.+||...|+=...+.++.+
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~ 353 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLH 353 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHH
Confidence 58999999999887777778899999988775321 235688887777766666655
No 60
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=91.88 E-value=0.65 Score=42.98 Aligned_cols=55 Identities=7% Similarity=-0.078 Sum_probs=39.1
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-.-....-...+.||+.+.++. .... .+||...++-...+.++..
T Consensus 314 ~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN-~~GG~la~GHp~gasG~~~~~~~~~ 370 (399)
T PRK09052 314 QDDLDWIELNEAFAAQSLAVIRDLGLDPSKVN-PLGGAIALGHPLGATGAIRTATVVH 370 (399)
T ss_pred HHHcCEEEeCcHHHHHHHHHHHHhCCCCcccC-CCCchhhcCchHHHHHHHHHHHHHH
Confidence 58999999888765555566789999887774 2333 5799987775555555544
No 61
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=91.75 E-value=0.49 Score=43.41 Aligned_cols=71 Identities=11% Similarity=-0.070 Sum_probs=46.1
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccc--ccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTL--YRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~--~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
.+|||++-+|-......-...+.||+....+. .+. -.+||...++-...+.++..+=+=+.+.+.|..+.+
T Consensus 303 ~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn-~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~ 375 (386)
T TIGR01930 303 ISDIDLFEINEAFAAQVLACIKELGLDLEKVN-VNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICI 375 (386)
T ss_pred HHHCCeeehcchhHHHHHHHHHHhCCChhhcC-CCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 58999999998877666667799998665553 222 356888877776666666553111245565554333
No 62
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=91.36 E-value=0.88 Score=41.91 Aligned_cols=76 Identities=5% Similarity=-0.086 Sum_probs=49.1
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQ-VGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll-~a~G~G~s 195 (225)
.+|||.+=+|-.-....-...+.||++.+++.+.= .-.+||...|+-...+.++..+=+-+.|.+.+. ++.|.|..
T Consensus 302 ~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g 379 (387)
T PRK07850 302 IGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALS 379 (387)
T ss_pred HHHcCeeeecccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCce
Confidence 58999999999877666667799999887764311 235688887777666666655322233444333 34555544
No 63
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=90.16 E-value=1.5 Score=40.54 Aligned_cols=57 Identities=11% Similarity=-0.040 Sum_probs=40.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchH---HHHHHHHHHc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSS---WYELAYSEAK 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasi---p~~L~~~~~~ 176 (225)
.+|||.+=+|-.-....-...+.||+.++++.+.= .-.+||...|+= ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 58999999999987777788899999998774311 234577776655 4445555543
No 64
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=90.00 E-value=1.1 Score=41.40 Aligned_cols=56 Identities=7% Similarity=-0.094 Sum_probs=39.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-.-....-...+.||+.++++.+. -.-.+||...||=...+.++..
T Consensus 306 ~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~ 362 (391)
T PRK07661 306 LSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIH 362 (391)
T ss_pred HHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHH
Confidence 5899999998887666666778999988777432 2234677776666555555554
No 65
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=89.98 E-value=0.8 Score=42.30 Aligned_cols=76 Identities=17% Similarity=0.095 Sum_probs=47.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHHcCCCCCCCE-EEEEeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEAKGRIRKGDR-IWQVGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~-vll~a~G~G~s 195 (225)
.+|||.+=+|-.-....-...+.||+.++++.+. -.-.+||...||=...+.++..+=+=+.|.+ |..++.|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh
Confidence 5899999888876655555668999998877532 2235688877775555555444211134443 44455555543
No 66
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=89.86 E-value=0.86 Score=42.04 Aligned_cols=75 Identities=12% Similarity=-0.013 Sum_probs=47.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeEcCCc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQ-VGFGSGF 194 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll-~a~G~G~ 194 (225)
.+|||.+=+|-.-....-...+.||+.++++.+.= .-.+||...||=...+.++..+=+-+.|++.+. ++.|.|.
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~ 384 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ 384 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc
Confidence 58999998887766666667899999888774321 234688877776666666555322234555433 3444443
No 67
>PRK08304 stage V sporulation protein AD; Validated
Probab=89.56 E-value=3.8 Score=37.22 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=48.1
Q ss_pred hhcccEEEE---ecCCHHHHHHHHHHcCCCcCccccc----ccc------cccccccchHHHHHHHHHHcCCCCCC--CE
Q 041084 120 KLAFEHFCV---HVGGKAVLDEMEKKVQLSEWHMEPM----TLY------RFGNTSSSSSWYELAYSEAKGRIRKG--DR 184 (225)
Q Consensus 120 ~~dId~~i~---Hq~~~~i~~~v~~~lgl~~e~~~~~----~~~------~~GNt~sasip~~L~~~~~~g~l~~G--d~ 184 (225)
++|.|.++. -..+..|+..+.++-|++.++...+ .++ .-|-.|+++-..++.-.+-. +++.| .+
T Consensus 225 ~~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~-~~~~g~~~r 303 (337)
T PRK08304 225 PEDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLK-ELQKGKLKR 303 (337)
T ss_pred hhhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHH-HHhcCCceE
Confidence 578998887 4567788999998888876533111 221 12555555554444433321 33444 57
Q ss_pred EEEEeEcCCcccc
Q 041084 185 IWQVGFGSGFNTI 197 (225)
Q Consensus 185 vll~a~G~G~s~~ 197 (225)
||+++.|+=+|-+
T Consensus 304 vl~v~tGaLls~~ 316 (337)
T PRK08304 304 VLVVATGALLSPT 316 (337)
T ss_pred EEEEEchhhcCcc
Confidence 9999999988844
No 68
>PRK05790 putative acyltransferase; Provisional
Probab=89.39 E-value=1.1 Score=41.13 Aligned_cols=56 Identities=13% Similarity=-0.019 Sum_probs=40.1
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+-+|-.-....-...+.||+.+.++.+.= .-.+||...||=...+.++..
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~ 364 (393)
T PRK05790 308 LADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLH 364 (393)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHH
Confidence 58999999988765555567789999877664321 235699988877777766665
No 69
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=88.98 E-value=2 Score=39.32 Aligned_cols=52 Identities=10% Similarity=0.020 Sum_probs=32.2
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCCcCcccc-cccccccccccchHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELA 171 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~ 171 (225)
.+|||++-.|-.+....+ .+.+.++....++.. ..-..+||+.+|+=.+.+.
T Consensus 293 ~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i 350 (411)
T PRK07314 293 PEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAI 350 (411)
T ss_pred HHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHH
Confidence 689999999987764433 455666654444421 2335679987776544443
No 70
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=88.90 E-value=1 Score=41.67 Aligned_cols=67 Identities=4% Similarity=-0.139 Sum_probs=42.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIW 186 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vl 186 (225)
.+|||.+=+|-.-....-...+.||+.++++.+. -.--+||...++-...+.++..+=+-+.|.+.|
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~ 387 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGL 387 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 5899999777665555445568999987766421 223568988877777776666532223444433
No 71
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.83 E-value=1.2 Score=41.34 Aligned_cols=55 Identities=9% Similarity=-0.051 Sum_probs=37.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCc--Ccccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSE--WHMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~--e~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-.-....-...+.||+.+ .++. .+.. -+||...++=...+.++..
T Consensus 313 ~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN-~~GG~la~GHp~gasG~~~~~e~~~ 371 (400)
T TIGR02430 313 IDQFDVIELNEAFAAQALAVLRELGLADDDARVN-PNGGAIALGHPLGASGARLVLTALR 371 (400)
T ss_pred HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeEC-CCCchHhccChHHHHHHHHHHHHHH
Confidence 5899999988887666667789999855 3442 2322 3798877755555555444
No 72
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=88.71 E-value=3.7 Score=37.73 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=36.6
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCCcCcccc-cccccccccccchHHHHHHHH---HHcCCCCC
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAYS---EAKGRIRK 181 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~~---~~~g~l~~ 181 (225)
.+|||++..|-.+....+ .+.+-++ +++.. .+-..+||+.+|+-.+.+..+ ++++.+.|
T Consensus 271 p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp 338 (381)
T PRK05952 271 PEDIDYIHAHGTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPP 338 (381)
T ss_pred HHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCC
Confidence 589999999987655433 3455555 22311 344678999998866655443 44555433
No 73
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=88.42 E-value=1.4 Score=40.76 Aligned_cols=55 Identities=7% Similarity=-0.077 Sum_probs=38.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCc--Ccccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSE--WHMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~--e~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-.-....-...+.||+.. .++. .+.. -+||...|+=...+.++..
T Consensus 313 ~~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN-~~GG~la~GHp~gasG~~~v~e~~~ 371 (400)
T PRK13359 313 LDQFDVIELNEAFASQGLAVLRELGLADDDARVN-PNGGAIALGHPLGASGARLVTTALY 371 (400)
T ss_pred HHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEE-CCCchhhcCCchhHHHHHHHHHHHH
Confidence 5899999988887666667788999844 4443 3333 3788877766666666555
No 74
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=88.13 E-value=3.4 Score=37.31 Aligned_cols=73 Identities=4% Similarity=-0.132 Sum_probs=47.6
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------ccccccc--ccccccccchHHHHHHHHHHc---
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMTL--YRFGNTSSSSSWYELAYSEAK--- 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~~--~~~GNt~sasip~~L~~~~~~--- 176 (225)
.+|||.+=+|-.-....-...+.||+.++ ++. .+. -.+||...++-...+.++..+
T Consensus 268 ~~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN-~~GG~la~Ghp~gatG~~~~~e~~~qlrg 346 (375)
T cd00829 268 PDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVN-TSGGLLSKGHPLGATGLAQAVEAVRQLRG 346 (375)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCcccc-CCCchhcCCCCccHHHHHHHHHHHHHhcC
Confidence 58999999999988888888999999873 332 122 235888777665555554442
Q ss_pred ----CCCCCCCEEEEEeEcCC
Q 041084 177 ----GRIRKGDRIWQVGFGSG 193 (225)
Q Consensus 177 ----g~l~~Gd~vll~a~G~G 193 (225)
.+++..+..+..+.|..
T Consensus 347 ~ag~~qv~~~~~~l~~~~gg~ 367 (375)
T cd00829 347 EAGARQVPGARVGLAHNIGGT 367 (375)
T ss_pred CcccccCCCccEEEEecCCCc
Confidence 13333455655655543
No 75
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=87.74 E-value=1.8 Score=40.19 Aligned_cols=55 Identities=9% Similarity=-0.095 Sum_probs=36.9
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC--cccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW--HMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e--~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++-+|-.-....-...+.||+.++ ++. .+.. .+||...++=...+.++..
T Consensus 314 ~~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN-~~GG~la~Ghp~gasG~~~~~e~~~ 372 (401)
T PRK09050 314 IDQFDVIELNEAFAAQGLAVLRQLGLADDDARVN-PNGGAIALGHPLGMSGARLVLTALH 372 (401)
T ss_pred HHHCCccccCcHhHHHHHHHHHHcCCCCCCCCEe-CCCchHhcCCchhHHHHHHHHHHHH
Confidence 58999999998876666667899999553 442 2333 3799988884444444333
No 76
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=87.63 E-value=0.57 Score=42.29 Aligned_cols=57 Identities=12% Similarity=0.050 Sum_probs=41.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc-cccccc---cccchHHHHHHHHHHc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT-LYRFGN---TSSSSSWYELAYSEAK 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~-~~~~GN---t~sasip~~L~~~~~~ 176 (225)
.+|||+|=+.-+=.-..-...|+||++++++.+.= .-..|| +|.|.+...|.+.+++
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 48999987766655555567799999999996411 113344 5677888899998886
No 77
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=87.38 E-value=3.1 Score=38.34 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=29.3
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCcCcccc-cccccccccccchH
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSS 166 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasi 166 (225)
.+|||++-.|-.+... +..+.+.++ ....+.. ..-..+||+.+|+=
T Consensus 305 p~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG 356 (424)
T PRK06333 305 PEEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAG 356 (424)
T ss_pred HHHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHH
Confidence 5899999999876543 335667777 2223311 44567799876663
No 78
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=87.18 E-value=6.6 Score=36.04 Aligned_cols=51 Identities=12% Similarity=-0.060 Sum_probs=32.4
Q ss_pred hhcccEEEEecCCHHHH-----HHHHHHcCCCcCcccccccccccccccchHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVL-----DEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAY 172 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~-----~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~ 172 (225)
.+|||++.+|-.+.... ..+.+.++-.. .+. .+-..+||+.+|+=.+.|..
T Consensus 277 ~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~-s~K~~~Gh~~~AaG~~~l~~ 332 (392)
T PRK09185 277 PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS-STKGLTGHTLGAAGAVEAAI 332 (392)
T ss_pred HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee-CCCcccccChhhcchHHHHH
Confidence 68999999998876532 34555565211 121 34467799998886655544
No 79
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=86.81 E-value=4.4 Score=37.70 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=36.6
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCcCcccccccccccccccchHHHHHHH---HHHcCCC
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAY---SEAKGRI 179 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~---~~~~g~l 179 (225)
.+|||++-.|--+... .+.+.+.+|-..-.+ ..+-..+||+.+|+=.+.|.. ++++|.+
T Consensus 303 ~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v-~s~K~~~GH~~~AaG~~~li~~~l~l~~~~i 369 (418)
T PRK07910 303 PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV-YAPKSALGHSVGAVGAVESILTVLALRDGVI 369 (418)
T ss_pred HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce-eCccccccccHHHHHHHHHHHHHHHHhcCcc
Confidence 6899999999877543 345667777321112 145567899988876554333 3445543
No 80
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=86.58 E-value=1 Score=41.62 Aligned_cols=53 Identities=11% Similarity=-0.075 Sum_probs=31.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc-cccccccccccchHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY 172 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~ 172 (225)
++|||++=+|-.-....-...+.|+++.+++.+ -..--+||.-.|+=...+.+
T Consensus 307 p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~ 360 (392)
T PRK06633 307 VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLIT 360 (392)
T ss_pred HHHcCeeehhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHH
Confidence 589999998854432222235778888777643 22345688877663333333
No 81
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=86.49 E-value=2.3 Score=39.29 Aligned_cols=54 Identities=20% Similarity=0.046 Sum_probs=32.1
Q ss_pred hhcccEEEEecCCHHHHHHHH-HH-cCCCcCcccc-cccccccccccchHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEME-KK-VQLSEWHMEP-MTLYRFGNTSSSSSWYELAYS 173 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~-~~-lgl~~e~~~~-~~~~~~GNt~sasip~~L~~~ 173 (225)
.+|||++..|-.+....+.+. +. ++.....+.. .+-..+||+.+|+-.+.|...
T Consensus 298 ~~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 354 (410)
T PRK07103 298 PEDIDYVNPHGTGSPLGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIAT 354 (410)
T ss_pred HHHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHH
Confidence 689999999998765433221 11 2222222311 344677999988877766554
No 82
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=86.41 E-value=3.4 Score=38.27 Aligned_cols=54 Identities=11% Similarity=-0.034 Sum_probs=33.7
Q ss_pred hhcccEEEEecCCHHHH-----HHHHHHcCCCc-Ccccc-cccccccccccchHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVL-----DEMEKKVQLSE-WHMEP-MTLYRFGNTSSSSSWYELAYS 173 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~-----~~v~~~lgl~~-e~~~~-~~~~~~GNt~sasip~~L~~~ 173 (225)
.+|||++-+|-.+...- +.+.+.++-.. +.+.. .+-..+||+.+|+=.+.|...
T Consensus 301 ~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~ 361 (421)
T PTZ00050 301 INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVT 361 (421)
T ss_pred hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHH
Confidence 58999999998766332 35566666322 23311 344577999888766555443
No 83
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=85.42 E-value=9.4 Score=36.45 Aligned_cols=76 Identities=16% Similarity=0.084 Sum_probs=52.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccc----cccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMT----LYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~----~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
.+|||.+=+|-.-.-.....++.||+.++.-.+.| +-.+||-+.++-...+.++.++=+=+++.+.|..+.|.-++
T Consensus 309 ~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~GG~~~ 388 (498)
T PRK08257 309 IDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTANGGYLT 388 (498)
T ss_pred HHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECCCChhh
Confidence 58999999999987777788899999877211222 23568888887777777766632223567777777665334
No 84
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=85.17 E-value=2.3 Score=39.29 Aligned_cols=56 Identities=4% Similarity=-0.151 Sum_probs=36.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-+-.-..-...+.||+.++++.+. -.-.+||...++=...+.+++.
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~ 363 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALI 363 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHH
Confidence 5899999888665544445578999988877532 1234677766665444444433
No 85
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=84.96 E-value=3.5 Score=37.56 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=32.7
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCc---Ccccc-cccccccccccchHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSE---WHMEP-MTLYRFGNTSSSSSWYELAYS 173 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~---e~~~~-~~~~~~GNt~sasip~~L~~~ 173 (225)
.+|||++.+|-.+... .+.+.+.++-.. ..+.. ..-..+||+.+|+-.+.|...
T Consensus 296 ~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 296 PSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHH
Confidence 6899999999876433 234445554321 22211 344568999988776655443
No 86
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=84.88 E-value=5.8 Score=36.56 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=48.4
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------ccccccc--ccccccccchHHHHHHHHHHc--C
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMTL--YRFGNTSSSSSWYELAYSEAK--G 177 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~~--~~~GNt~sasip~~L~~~~~~--g 177 (225)
.+|||.+-+|-.-....-...+.||+.+. ++. ... -.+||-..++=...+.++..+ |
T Consensus 293 ~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN-~~GG~la~Ghp~gatG~~~~~e~~~QLrg 371 (403)
T PRK06289 293 LDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPIN-PSGGLIGGGHPVGASGVRMLLDAAKQVTG 371 (403)
T ss_pred HHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEc-CCCCccccCCCccchHHHHHHHHHHHHhc
Confidence 59999999999988887788899998863 232 122 246887766666666665552 2
Q ss_pred -----CCCCCCEEEEEeEcCCcc
Q 041084 178 -----RIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 178 -----~l~~Gd~vll~a~G~G~s 195 (225)
+++..+..+..+.|.|..
T Consensus 372 ~ag~~Qv~~~~~~l~~~~gg~~~ 394 (403)
T PRK06289 372 TAGDYQVEGAKTFGTLNIGGSTT 394 (403)
T ss_pred cccCccCCchheEEEEecCcccc
Confidence 222334555566665443
No 87
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=84.27 E-value=7.3 Score=35.62 Aligned_cols=72 Identities=8% Similarity=-0.073 Sum_probs=46.6
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC----------------cccc-c-ccc--cccccccchHHHHHHHHHHc--C
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW----------------HMEP-M-TLY--RFGNTSSSSSWYELAYSEAK--G 177 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e----------------~~~~-~-~~~--~~GNt~sasip~~L~~~~~~--g 177 (225)
.+|||++-+|-......-...+.||+.++ ++ + + ... .+||...++=...+.++..+ |
T Consensus 275 ~~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~-pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g 353 (389)
T PRK06064 275 PKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI-PVNPSGGLKAKGHPVGATGVSQAVEIVWQLRG 353 (389)
T ss_pred HHHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe-eecCCCCcccCCCCcchhHHHHHHHHHHHHhC
Confidence 58999999999988777778899998653 22 2 1 111 37898877666666665542 2
Q ss_pred C-------CCCCCEEEEEeEcC
Q 041084 178 R-------IRKGDRIWQVGFGS 192 (225)
Q Consensus 178 ~-------l~~Gd~vll~a~G~ 192 (225)
+ ++.-++.+..++|.
T Consensus 354 ~a~~g~rqv~~a~~~l~~~~g~ 375 (389)
T PRK06064 354 EAEKGRQQVIGAGYGLTHNVGG 375 (389)
T ss_pred CCCCCCccCCCccEEEEecCCC
Confidence 2 22335566666664
No 88
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=84.18 E-value=4.7 Score=36.86 Aligned_cols=55 Identities=9% Similarity=-0.119 Sum_probs=38.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------ccccccc--ccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMTL--YRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~~--~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+-+|-.-....-...+.||+.+. ++. ... --+||-..|+=...+.++..
T Consensus 274 ~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN-~~GG~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 274 PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVN-LFGGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeC-CCCCcccCCCCccHHHHHHHHHHHH
Confidence 58999999999988777778899998763 232 111 24688776665555555544
No 89
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=83.62 E-value=5.5 Score=36.83 Aligned_cols=56 Identities=9% Similarity=-0.086 Sum_probs=38.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCc---Cccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSE---WHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~---e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+-+|-.-....-...+.||+.+ +++.+. -.--+||...|+=...+.++..
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~ 374 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLR 374 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHH
Confidence 5899999999887766666778899876 355321 1234688877766656555554
No 90
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=83.47 E-value=7.6 Score=35.57 Aligned_cols=56 Identities=9% Similarity=-0.110 Sum_probs=41.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------cccccc-cccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMT-LYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~-~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+-+|-......-...+.||+.++ ++.+.= .--+||...||=...+.++..
T Consensus 277 ~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 277 LDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHH
Confidence 58999999999988887788899999875 232100 235799888777777777655
No 91
>PLN02287 3-ketoacyl-CoA thiolase
Probab=83.23 E-value=5.1 Score=37.79 Aligned_cols=56 Identities=11% Similarity=-0.053 Sum_probs=37.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||++=+|-.-....-...+.||+.++++.+. -.--+||...||=...+.++..
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~ 404 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLH 404 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHH
Confidence 5899999988665555455678999988877431 1234688866665555555544
No 92
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=82.67 E-value=7.3 Score=35.83 Aligned_cols=56 Identities=11% Similarity=-0.099 Sum_probs=36.2
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCC-Cc--Cccccc-ccccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQL-SE--WHMEPM-TLYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl-~~--e~~~~~-~~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.||+ ++ +++.+. -.-.+||...||=...+.++..
T Consensus 299 ~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~ 358 (387)
T PRK08947 299 ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLN 358 (387)
T ss_pred HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHH
Confidence 58999999999987777778899998 43 455321 1124577655554444444443
No 93
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=82.51 E-value=5.6 Score=34.14 Aligned_cols=68 Identities=9% Similarity=0.107 Sum_probs=43.8
Q ss_pred hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
.+||+|+|.-. ..+.+.-.+.++||++++--. ..+--.|--++++-+-.-.+..+. .||.+||+++.-
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R-~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQR-TPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEE-EEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEE-EEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 58999999743 456777789999999987552 455556666666655444444443 489999998875
No 94
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=82.50 E-value=3.1 Score=38.57 Aligned_cols=61 Identities=8% Similarity=-0.071 Sum_probs=36.5
Q ss_pred hhcccEEEEecCCHHHH-----HHHHHHcCCC-cCcccc-cccccccccccchHHHHHH---HHHHcCCCC
Q 041084 120 KLAFEHFCVHVGGKAVL-----DEMEKKVQLS-EWHMEP-MTLYRFGNTSSSSSWYELA---YSEAKGRIR 180 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~-----~~v~~~lgl~-~e~~~~-~~~~~~GNt~sasip~~L~---~~~~~g~l~ 180 (225)
.+|||++-.|-.+...- +.+.+.+|-. .+++.. .+-..+||+.+|+-.+.+. .++++|.+.
T Consensus 295 ~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ip 365 (414)
T PRK08722 295 GEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVP 365 (414)
T ss_pred HHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccC
Confidence 58999999998765433 3455666632 233311 3446789998887655543 344555543
No 95
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=82.10 E-value=2.8 Score=37.93 Aligned_cols=75 Identities=12% Similarity=0.042 Sum_probs=52.8
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc-----cccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP-----MTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGF 194 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~-----~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~ 194 (225)
.+|||.|=+..+=..-.-.-.++|+|++||+.+ ...+-.|-||+=.+...|+++-++|+-.+.. |+-+.+|.|+
T Consensus 337 v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGm 415 (435)
T KOG1389|consen 337 VDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGM 415 (435)
T ss_pred ccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhccccccc-eEEEeecCCc
Confidence 489999877665444444557999999999965 3346789999999999999997766422222 4455566666
Q ss_pred c
Q 041084 195 N 195 (225)
Q Consensus 195 s 195 (225)
-
T Consensus 416 G 416 (435)
T KOG1389|consen 416 G 416 (435)
T ss_pred c
Confidence 5
No 96
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=81.63 E-value=4.4 Score=36.72 Aligned_cols=45 Identities=13% Similarity=0.071 Sum_probs=28.2
Q ss_pred hhcccEEEEecCCHHHH-----HHHHHHcCCCcCcccc-cccccccccccch
Q 041084 120 KLAFEHFCVHVGGKAVL-----DEMEKKVQLSEWHMEP-MTLYRFGNTSSSS 165 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~-----~~v~~~lgl~~e~~~~-~~~~~~GNt~sas 165 (225)
.+|||++-.|-.+...- ..+.+.+|-. ..+.. .+-..+||+.+|+
T Consensus 223 p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~Aa 273 (342)
T PRK14691 223 PEQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAA 273 (342)
T ss_pred HHHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchh
Confidence 58999999998766543 3456667632 22311 3446789976555
No 97
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=81.05 E-value=8.8 Score=37.11 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=36.0
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCcCcccc-cccccccccccchHHHHHHH---HHHcCCCC
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY---SEAKGRIR 180 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~---~~~~g~l~ 180 (225)
++|||++-.|--+... .+.+.+.+|-.+ .+.. .+-..+||+.+|+=.+.+.. ++++|.+.
T Consensus 422 p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iP 490 (540)
T PLN02787 422 KEDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVH 490 (540)
T ss_pred HHHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-CceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcC
Confidence 6899999999876543 335666677322 2311 34467899887765443333 44555543
No 98
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=80.88 E-value=6.4 Score=36.46 Aligned_cols=55 Identities=5% Similarity=-0.177 Sum_probs=35.1
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC--cccccccc--cccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW--HMEPMTLY--RFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e--~~~~~~~~--~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.||+..+ ++. .... -+||-..||=...+.++..
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN-~~GG~la~GhP~gAtG~~~~~el~~ 371 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVN-PNGGAIAVGHPLGASGARLALTAAR 371 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCcc-CCccHHhcCCchhhhHHHHHHHHHH
Confidence 58999999998765555557789998543 443 2222 4788766555555554443
No 99
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=80.53 E-value=6.3 Score=36.23 Aligned_cols=33 Identities=0% Similarity=-0.132 Sum_probs=28.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEP 152 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~ 152 (225)
.+|||.+=+|-+-....-...+.||++.+++.+
T Consensus 302 ~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~ 334 (388)
T PRK06366 302 IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNV 334 (388)
T ss_pred HHHcceeeccchhHHHHHHHHHHhCCCCCccCC
Confidence 589999999999877777788999999887754
No 100
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=79.37 E-value=11 Score=34.69 Aligned_cols=46 Identities=13% Similarity=0.003 Sum_probs=30.6
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCC-Cc--Ccccccc-cccccccccch
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQL-SE--WHMEPMT-LYRFGNTSSSS 165 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl-~~--e~~~~~~-~~~~GNt~sas 165 (225)
.+|||.+=+|-.-....-...+.||+ ++ +++.+.= .--+||-..||
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GAT 346 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCS 346 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCcccc
Confidence 58999999999987777778899998 43 4553311 12346654443
No 101
>PRK06158 thiolase; Provisional
Probab=78.36 E-value=24 Score=32.33 Aligned_cols=29 Identities=0% Similarity=-0.252 Sum_probs=24.7
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW 148 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e 148 (225)
.+|||.+=+|-.-.-..-...+.||+.+.
T Consensus 271 p~DId~~ElyD~Fs~~~l~~~E~lG~~~~ 299 (384)
T PRK06158 271 PADIDVVELYDAFTINTILFLEDLGFCAK 299 (384)
T ss_pred HHHCcEEEecCCchHHHHHHHHHcCCCCC
Confidence 58999999999977777777899998765
No 102
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=77.89 E-value=8.8 Score=35.81 Aligned_cols=74 Identities=9% Similarity=-0.040 Sum_probs=42.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcC-----------------CCcCccccccc--ccccccccchHHHHHHHHHHcCCCC
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQ-----------------LSEWHMEPMTL--YRFGNTSSSSSWYELAYSEAKGRIR 180 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lg-----------------l~~e~~~~~~~--~~~GNt~sasip~~L~~~~~~g~l~ 180 (225)
.+|||.+=+|-.-....-...+.|+ ++.+++.+ .. -.+||-..++=...+.++..+=+-+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~-~GG~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNV-LGGSIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCC-CCCHHhcCCCccccHHHHHHHHHHHHhhc
Confidence 5899999999986555444455553 44445532 22 2457777666666666655532223
Q ss_pred CCCEEEE-EeEcCCc
Q 041084 181 KGDRIWQ-VGFGSGF 194 (225)
Q Consensus 181 ~Gd~vll-~a~G~G~ 194 (225)
.|++.|. ++.|.|.
T Consensus 405 ~g~~gl~~~c~ggG~ 419 (428)
T PRK08963 405 GGGLGLTTACAAGGL 419 (428)
T ss_pred CCCEEEEEEccccCh
Confidence 5565444 3334443
No 103
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=77.41 E-value=11 Score=34.67 Aligned_cols=58 Identities=9% Similarity=-0.000 Sum_probs=35.9
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCcCcccc-cccccccccccchHHHHHHH---HHHcCCC
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY---SEAKGRI 179 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~---~~~~g~l 179 (225)
.+|||++..|.-+... .+.+.+-+|-. +... .+-..+||+.+|+=.+.|.. +++++.+
T Consensus 287 ~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~i 353 (399)
T cd00832 287 PEDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVI 353 (399)
T ss_pred HHHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCc
Confidence 6899999999866433 33456666632 2211 34456799988877766654 3445443
No 104
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.12 E-value=12 Score=34.63 Aligned_cols=47 Identities=11% Similarity=-0.028 Sum_probs=29.4
Q ss_pred hhcccEEEEecCCH-----HHHHHHHHHcCCCcCcccccccccccccccchHHH
Q 041084 120 KLAFEHFCVHVGGK-----AVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWY 168 (225)
Q Consensus 120 ~~dId~~i~Hq~~~-----~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~ 168 (225)
.+|||++..|--+. .-...+.+.+|- .-.+ -.+-..+||+.+|+-.+
T Consensus 292 p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv-~s~K~~~GH~~~AaG~~ 343 (405)
T PRK09116 292 PEDIGYVNAHGTATDRGDIAESQATAAVFGA-RMPI-SSLKSYFGHTLGACGAL 343 (405)
T ss_pred HHHcCEEECcCccCCCCCHHHHHHHHHHhCC-CCee-ECcchhhcccHHHHHHH
Confidence 58999999997554 334456677762 1112 14456789996665443
No 105
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=75.00 E-value=12 Score=34.78 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=34.2
Q ss_pred hcccEEEEecCCHHHH-----HHHHHHcCCCcCcccccccccccccccchHHHHH---HHHHHcCCC
Q 041084 121 LAFEHFCVHVGGKAVL-----DEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYEL---AYSEAKGRI 179 (225)
Q Consensus 121 ~dId~~i~Hq~~~~i~-----~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L---~~~~~~g~l 179 (225)
.|||++..|--+...- +.+.+.+|-..-.+. .+-..+||+.+|+=.+.+ ..++++|.+
T Consensus 289 ~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~-s~K~~~GH~~~AaG~~e~i~~~lal~~~~i 354 (406)
T PRK07967 289 TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAIS-ATKSLTGHSLGAAGVQEAIYSLLMMEHGFI 354 (406)
T ss_pred CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCeeE-CcccccccCccccchHHHHHHHHHHhcCcC
Confidence 4999999998665433 355666763211121 344678998888765543 234455544
No 106
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=74.32 E-value=35 Score=31.31 Aligned_cols=29 Identities=3% Similarity=-0.215 Sum_probs=25.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW 148 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e 148 (225)
.+|||.+=+|-.-....-...+.||+.++
T Consensus 274 ~~Did~~el~d~F~~~~~~~~e~lGl~~~ 302 (386)
T PRK08313 274 RDEIDVAEIYVPFSWFEPMWLENLGFAPE 302 (386)
T ss_pred hhhCCEEEeccCChHHHHHHHHHcCCCCC
Confidence 48999999999987777778899999876
No 107
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.46 E-value=15 Score=33.93 Aligned_cols=69 Identities=17% Similarity=0.080 Sum_probs=41.6
Q ss_pred hHhhhhccchhhhhhcccEEEEecCCHHH-----HHHHHHHcCCCcCcccccccccccccccchHHHHHHH---HHHcCC
Q 041084 107 IFKMKINPYVPDFKLAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAY---SEAKGR 178 (225)
Q Consensus 107 v~~~a~~~~~~~~~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~---~~~~g~ 178 (225)
.++.+++. ... .+|||++..|--+... ...+.+.+++| +. .+-..+||+.+|+=.+-+.. +++.|.
T Consensus 285 am~~AL~~-Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p---vs-S~Ks~~GH~l~AAGa~e~i~~~lal~~g~ 358 (398)
T PRK06519 285 SLERLLKP-AGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP---VR-GIGTLFGHTMEAQFPLGLALAALSVSKGA 358 (398)
T ss_pred HHHHHHHH-CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC---cc-ccchhhccchHHHHHHHHHHHHHHHhcCc
Confidence 34555543 222 4899999999876543 33556667743 32 55567899988875554433 445555
Q ss_pred CCC
Q 041084 179 IRK 181 (225)
Q Consensus 179 l~~ 181 (225)
+.|
T Consensus 359 vpp 361 (398)
T PRK06519 359 LFP 361 (398)
T ss_pred cCC
Confidence 433
No 108
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=72.42 E-value=10 Score=35.29 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=30.2
Q ss_pred hhcccEEEEecCCHHHHH-----HHHHHcCCCc--Ccccc-cccccccccccchHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLD-----EMEKKVQLSE--WHMEP-MTLYRFGNTSSSSSWYEL 170 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~-----~v~~~lgl~~--e~~~~-~~~~~~GNt~sasip~~L 170 (225)
.+|||++-.|-.+...-+ .+.+.++-.. ..+.. .+-..+||+.+|+=.+.|
T Consensus 316 ~~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~l 374 (437)
T PLN02836 316 PNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEA 374 (437)
T ss_pred HhHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHH
Confidence 589999999987664333 3555554221 12211 344577999877755443
No 109
>PRK06059 lipid-transfer protein; Provisional
Probab=72.27 E-value=35 Score=31.34 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=36.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------cccccc-cccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMT-LYRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~-~~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.||+.+. ++.+.= .--+||-..++=...+.++..
T Consensus 290 ~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~ 364 (399)
T PRK06059 290 PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTW 364 (399)
T ss_pred HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHH
Confidence 58999999999965554455699998864 232100 124677776666666666544
No 110
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=71.80 E-value=48 Score=30.53 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=45.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC-----------------cccccc----cccccccccchHHHHHHHHHHc--
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW-----------------HMEPMT----LYRFGNTSSSSSWYELAYSEAK-- 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e-----------------~~~~~~----~~~~GNt~sasip~~L~~~~~~-- 176 (225)
.+|||.+-+|-.-.-..-...+.||+-+. ++ |.| +-..||...|+-...+.++..+
T Consensus 272 ~~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l-PvN~sGG~l~~G~p~gatG~~~~~E~~~QLr 350 (388)
T PRK08142 272 PADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL-PFNTDGGGLCNNHPANRGGMTKVIEAVRQLR 350 (388)
T ss_pred HHHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc-cccCCChhhcCCCcCcccHHHHHHHHHHHHc
Confidence 58999999999876666677799998543 12 211 1235777777666666665552
Q ss_pred C------CCCCCCEEEEEeEcC
Q 041084 177 G------RIRKGDRIWQVGFGS 192 (225)
Q Consensus 177 g------~l~~Gd~vll~a~G~ 192 (225)
| +++.-++.|..+.|.
T Consensus 351 G~ag~~rQV~~a~~gl~~~~Gg 372 (388)
T PRK08142 351 GEAHPAVQVPNCDLALAHGTGG 372 (388)
T ss_pred CCCCCCCCCCCCcEEEEeCCCC
Confidence 2 233335666666664
No 111
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.14 E-value=19 Score=33.21 Aligned_cols=59 Identities=10% Similarity=0.006 Sum_probs=34.7
Q ss_pred hcccEEEEecCCHHH-----HHHHHHHcCCCcCcccc-cccccccccccchHHHHHHH---HHHcCCC
Q 041084 121 LAFEHFCVHVGGKAV-----LDEMEKKVQLSEWHMEP-MTLYRFGNTSSSSSWYELAY---SEAKGRI 179 (225)
Q Consensus 121 ~dId~~i~Hq~~~~i-----~~~v~~~lgl~~e~~~~-~~~~~~GNt~sasip~~L~~---~~~~g~l 179 (225)
+|||++-.|--+... .+.+.+.++-....... .+-..+||+.+|+=.+.+.- ++++|.+
T Consensus 290 ~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~i 357 (406)
T PRK08439 290 PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGIL 357 (406)
T ss_pred CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCee
Confidence 789999999876543 33455666633222211 34456899998886554432 3445543
No 112
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=69.48 E-value=27 Score=32.14 Aligned_cols=55 Identities=13% Similarity=-0.075 Sum_probs=37.9
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCc------------------Cccccccc--ccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSE------------------WHMEPMTL--YRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~------------------e~~~~~~~--~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.||+.+ .++.+ .. --+||-..||=...+.++..
T Consensus 286 ~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~-~GG~la~GhP~gAtG~~~~~e~~~ 360 (393)
T cd00826 286 IGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINP-NGGAIAIGHPIGASGAAICAELCF 360 (393)
T ss_pred HHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECC-CCchhhcCCCccccHHHHHHHHHH
Confidence 5899999999987777667789999886 23321 11 24688876666555555544
No 113
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=68.87 E-value=34 Score=31.57 Aligned_cols=55 Identities=15% Similarity=-0.029 Sum_probs=38.0
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC--c--------------ccccc--c--ccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW--H--------------MEPMT--L--YRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e--~--------------~~~~~--~--~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+-+|-.-....-...+.||+.+. . + |.| . -.+||...|+=...+.++..
T Consensus 275 ~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~-PvN~~GG~la~Ghp~gatG~~~v~e~~~ 349 (385)
T PRK06066 275 RKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGEL-PVNPSGGHLAKGVPLEASGLSLLLDAVE 349 (385)
T ss_pred HHHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCc-cccCCCchhcCCCccchhHHHHHHHHHH
Confidence 48999999999877777778899998763 2 1 111 1 23688877766666666555
No 114
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=67.17 E-value=10 Score=29.29 Aligned_cols=75 Identities=13% Similarity=0.044 Sum_probs=44.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCccccccc--ccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeEcCCcc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTL--YRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQ-VGFGSGFN 195 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~--~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll-~a~G~G~s 195 (225)
.+|||.|=+|-+-....-...+.||++++++.+ +. =-+||-..||=...+.++..+=+-+.|++.+. ++.|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~-~GG~la~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNP-NGGALALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBST-T--HHHH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCc-ccccccccccccccccchhhhhHHHHHHhchhhhhHHhcccceee
Confidence 599999999999888888899999999999864 21 23566655554444444333211123555433 44555543
No 115
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=66.22 E-value=17 Score=33.85 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=16.0
Q ss_pred cceeeeecceeeeEEeccC
Q 041084 15 LANGLFREGDAAILLSNRS 33 (225)
Q Consensus 15 ~t~~LFGDGAaAvvL~~~~ 33 (225)
..++..+|||+|+||...+
T Consensus 261 ~~~s~~~DGAaA~vl~s~e 279 (426)
T PRK08170 261 GNSSQITDGACWLLLASEE 279 (426)
T ss_pred cccCCCCCceEEEEEecHH
Confidence 5568889999999999764
No 116
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=65.00 E-value=6.7 Score=33.08 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=26.3
Q ss_pred cccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 159 GNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 159 GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
|.-.+.|.|.....+++.=.+++|++||=+|.|+|+.
T Consensus 50 ~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~ 86 (209)
T PF01135_consen 50 GCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQ 86 (209)
T ss_dssp ETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHH
T ss_pred cceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHH
Confidence 3335667788888888866799999999999999998
No 117
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=64.86 E-value=56 Score=30.09 Aligned_cols=71 Identities=15% Similarity=0.053 Sum_probs=45.3
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC------------------ccccccc--ccccccccchHHHHHHHHHHc--C
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW------------------HMEPMTL--YRFGNTSSSSSWYELAYSEAK--G 177 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e------------------~~~~~~~--~~~GNt~sasip~~L~~~~~~--g 177 (225)
.+|||.+=+|-.-....-...+.||+.+. ++. ... -.+||...|+=...+.++.++ |
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN-~~GG~la~Ghp~gatG~~~~~e~~~QLrg 363 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQ-IDGGLKCFGHPIGASGLRMLYEMYLQLLG 363 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeec-CCCCcccCCCcccHhHHHHHHHHHHHhcc
Confidence 48999999999877776777899998873 222 122 246888777666666665552 2
Q ss_pred -----CCCCCCEEEEEeEc
Q 041084 178 -----RIRKGDRIWQVGFG 191 (225)
Q Consensus 178 -----~l~~Gd~vll~a~G 191 (225)
+++.-++.+..+.|
T Consensus 364 ~ag~rQv~~a~~~l~~~~g 382 (398)
T PRK06157 364 RAGERQLKNPRLALTHNLG 382 (398)
T ss_pred cccCccCCCccEEEEeccC
Confidence 24444555555555
No 118
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.42 E-value=18 Score=33.80 Aligned_cols=18 Identities=22% Similarity=0.322 Sum_probs=16.4
Q ss_pred eeeeecceeeeEEeccCC
Q 041084 17 NGLFREGDAAILLSNRSS 34 (225)
Q Consensus 17 ~~LFGDGAaAvvL~~~~~ 34 (225)
-+.+|.||+++|||.-+.
T Consensus 227 Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 227 GFVIGEGAGALVLEELEH 244 (412)
T ss_pred CEEEecceeEEEecChhh
Confidence 899999999999998764
No 119
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=63.12 E-value=48 Score=31.12 Aligned_cols=28 Identities=14% Similarity=-0.078 Sum_probs=24.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCc
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSE 147 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~ 147 (225)
.+|||.+=+|-.-....-...+.||+.+
T Consensus 326 ~~DiD~~Ei~daFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 326 PSDLQVAEVHDCFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHCcEeeecccChHHHHHHHHHcCCCC
Confidence 5899999999998777777889999987
No 120
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=62.57 E-value=29 Score=32.49 Aligned_cols=55 Identities=5% Similarity=-0.092 Sum_probs=34.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcC-----------------CCcCccccccc--ccccccccchHHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQ-----------------LSEWHMEPMTL--YRFGNTSSSSSWYELAYSEA 175 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lg-----------------l~~e~~~~~~~--~~~GNt~sasip~~L~~~~~ 175 (225)
.+|||.+=+|-.-....-...+.|| ++.+++.+ .. --+||-..||=...+.++..
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~-~GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNV-LGGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCC-CCCHHhcCCCccccHHHHHHHHHH
Confidence 5899999999986655555566665 55555532 22 23577776665555555544
No 121
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=59.53 E-value=8 Score=32.70 Aligned_cols=58 Identities=7% Similarity=-0.020 Sum_probs=38.8
Q ss_pred hhcccEEEEecCCH------------HHHHHHHHHcCCC-------cCcccccccc---cccccccchHHHHHHHHHHcC
Q 041084 120 KLAFEHFCVHVGGK------------AVLDEMEKKVQLS-------EWHMEPMTLY---RFGNTSSSSSWYELAYSEAKG 177 (225)
Q Consensus 120 ~~dId~~i~Hq~~~------------~i~~~v~~~lgl~-------~e~~~~~~~~---~~GNt~sasip~~L~~~~~~g 177 (225)
..|+|.|++|+... ..++.+++.+|++ ++++...... .-=|+|||-..+.|+|..++-
T Consensus 114 ~SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr~~~~~~~~~~E~~GSaQh~LLLdEFYRTa 193 (204)
T PF12633_consen 114 SSDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFRHNRSGSPLTGESCGSAQHLLLLDEFYRTA 193 (204)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHhcCCcccCCCCCCChHHHHHHHHHHHHHHH
Confidence 58999999999753 2344567778854 3444211111 124799999999999988853
No 122
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=58.63 E-value=42 Score=29.65 Aligned_cols=64 Identities=8% Similarity=-0.082 Sum_probs=36.9
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~G 191 (225)
++|||+++.... .+.....+.+.||++..... ..+.. ++++-..+|..+ ++.| +.+++|+++.-
T Consensus 80 ~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~-~~v~~----~C~~~~~al~~A~~~i~~g---~~~~~Lvv~~e 151 (338)
T PRK09258 80 PSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCAN-FDVSN----ACLGFLNGMLDAANMIELG---QIDYALVVSGE 151 (338)
T ss_pred HHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCce-eehhh----hhHHHHHHHHHHHHHHHcC---CCCEEEEEEec
Confidence 589999987433 34455678899999865331 23321 344444444443 3333 45677766644
No 123
>PLN00415 3-ketoacyl-CoA synthase
Probab=57.21 E-value=41 Score=32.00 Aligned_cols=68 Identities=7% Similarity=-0.007 Sum_probs=42.5
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
++|||++|.... .+..-..+.+++|++++-.. .. .+.+|++.-..+|..+..-=+..++.++|+++.-
T Consensus 153 p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~-~d---L~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E 224 (466)
T PLN00415 153 PREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKT-YN---LSGMGCSAGAISVDLATNLLKANPNTYAVIVSTE 224 (466)
T ss_pred HHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceE-EE---eccccchHHHHHHHHHHHHHHhCCCCEEEEEEEe
Confidence 689999887543 34555678999999854321 22 3455666666666665442233577888877643
No 124
>PLN03172 chalcone synthase family protein; Provisional
Probab=56.87 E-value=32 Score=31.75 Aligned_cols=69 Identities=12% Similarity=-0.019 Sum_probs=42.3
Q ss_pred hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
.+|||++|... ..+.+--.+.++||+.+.-. .. -..|+++++-..+|..+..-=+-.++.+||+++.-.
T Consensus 121 ~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~--~~--~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~ 193 (393)
T PLN03172 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVK--RF--MMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEI 193 (393)
T ss_pred HHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCce--EE--eeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEeh
Confidence 57999987533 34556667899999977521 01 124566677777776654421224678888776543
No 125
>PLN03173 chalcone synthase; Provisional
Probab=55.85 E-value=46 Score=30.70 Aligned_cols=68 Identities=13% Similarity=0.005 Sum_probs=42.5
Q ss_pred hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
.+|||++|... ..+.+--.+.++||++..-. .. --.|++++.-..+|..+..-=+-.++.+||+++.-
T Consensus 121 ~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~--~~--~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E 192 (391)
T PLN03173 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVK--RF--MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192 (391)
T ss_pred HHHCCEEEEEccCCCcccHHHHHHHHHhCCCccce--ee--ehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEe
Confidence 57999987753 23455557899999876521 01 12456677777777666442122467888887654
No 126
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=55.09 E-value=52 Score=29.51 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=37.0
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~G 191 (225)
++|||+++.... .+..-..+.++||+.++... ..+.. +++++...+|..+ ++.+ +.+++|+++.-
T Consensus 104 ~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~-~dv~~---~~C~~~~~al~~A~~~~~~~---~~~~aLvv~~e 175 (361)
T cd00831 104 PSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKR-YNLGG---MGCSAGAIALDLAKDLLEAN---PGARVLVVSTE 175 (361)
T ss_pred HHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccch-hcccc---ccchhHHHHHHHHHHHHHHC---CCCEEEEEEee
Confidence 689999988443 23344578899999764321 22221 2344444444444 3333 45778877654
No 127
>PLN02192 3-ketoacyl-CoA synthase
Probab=54.90 E-value=42 Score=32.32 Aligned_cols=81 Identities=7% Similarity=0.071 Sum_probs=48.3
Q ss_pred hhhHhhhhccchhhh---hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcC
Q 041084 105 RTIFKMKINPYVPDF---KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKG 177 (225)
Q Consensus 105 ~~v~~~a~~~~~~~~---~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g 177 (225)
..++..|+++.+.+. ++|||.+|... ..+.+-..+.+++|+..+-.. .. .+-+|++.-.++|+.+..-=
T Consensus 177 ~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~a-fd---LsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 177 ETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILS-YN---LGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceE-EE---cccchhhhHHHHHHHHHHHH
Confidence 344444444444444 68999988753 345677789999998754221 22 34466666667776664421
Q ss_pred CCCCCCEEEEEe
Q 041084 178 RIRKGDRIWQVG 189 (225)
Q Consensus 178 ~l~~Gd~vll~a 189 (225)
+..++.++|+++
T Consensus 253 ~a~~~~~aLVVs 264 (511)
T PLN02192 253 QVHPNSYALVIS 264 (511)
T ss_pred HcCCCCeEEEEE
Confidence 234667777666
No 128
>PLN02377 3-ketoacyl-CoA synthase
Probab=51.17 E-value=54 Score=31.52 Aligned_cols=82 Identities=9% Similarity=0.060 Sum_probs=44.9
Q ss_pred hhhHhhhhccchhhh---hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcC
Q 041084 105 RTIFKMKINPYVPDF---KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKG 177 (225)
Q Consensus 105 ~~v~~~a~~~~~~~~---~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g 177 (225)
..+...|+++.+.+. ++|||++|... ..+.+--.+.++||+.++-.. ..+ +-+|++.-.++|..+..-=
T Consensus 173 ~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~a-fdL---~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 173 EQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-FNL---GGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeE-Eec---ccchhhHHHHHHHHHHHHH
Confidence 334444444433333 58999998832 345667789999999765331 232 2244455555555543311
Q ss_pred CCCCCCEEEEEeE
Q 041084 178 RIRKGDRIWQVGF 190 (225)
Q Consensus 178 ~l~~Gd~vll~a~ 190 (225)
+..++.++|+++.
T Consensus 249 ~~~~~~~aLVVst 261 (502)
T PLN02377 249 QVHRNTYAVVVST 261 (502)
T ss_pred HcCCCCEEEEEEE
Confidence 1235666666554
No 129
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the 3-layer alpha/beta/alpha sandwich domain. This domain has a similar topology to the archaeal hypothetical protein, MTH1675 from Methanobacterium thermoautotrophicum.; PDB: 3QTG_B 1VP8_A 1T57_C 3N25_A 1AQF_C 2G50_B 1F3X_G 1A5U_F 1A49_E 1F3W_C ....
Probab=49.98 E-value=33 Score=25.70 Aligned_cols=51 Identities=18% Similarity=0.297 Sum_probs=30.2
Q ss_pred HHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeE
Q 041084 139 MEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 139 v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~ 190 (225)
++++|.+-.--. |..+.+.....-..+-.++..+.+.|.+++||+|++++-
T Consensus 51 ~~r~l~l~~GV~-p~~~~~~~~~~~~~~~~a~~~~~~~g~~~~gd~vVv~~g 101 (117)
T PF02887_consen 51 VARQLSLYWGVY-PVLIEEFDKDTEELIAEALEYAKERGLLKPGDKVVVVAG 101 (117)
T ss_dssp HHHHGGGSTTEE-EEECSSHSHSHHHHHHHHHHHHHHTTSS-TTSEEEEEEE
T ss_pred HHhhhhcccceE-EEEeccccccHHHHHHHHHHHHHHcCCCCCCCEEEEEeC
Confidence 445554433322 333444442234455567777888999999999998776
No 130
>PRK07937 lipid-transfer protein; Provisional
Probab=49.80 E-value=1.1e+02 Score=27.79 Aligned_cols=71 Identities=8% Similarity=-0.046 Sum_probs=44.9
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcC-cccc--cccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEW-HMEP--MTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e-~~~~--~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||.+=+|-.-....-...+.||+..+ ++.+ -.+. ||-..++=...+.++..+=+=+..++.|..+.|.
T Consensus 264 ~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg 337 (352)
T PRK07937 264 AGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDGSARRALAHATSG 337 (352)
T ss_pred HHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 58999999999988777778899999543 4432 1232 5555545555555555421112456677776664
No 131
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=48.54 E-value=71 Score=28.50 Aligned_cols=80 Identities=4% Similarity=0.003 Sum_probs=52.1
Q ss_pred hHhhhhccchhhh---hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCC
Q 041084 107 IFKMKINPYVPDF---KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRI 179 (225)
Q Consensus 107 v~~~a~~~~~~~~---~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l 179 (225)
++-.++++++.+. ++|||.+|... +.+.+-..+.+++|+..+-.. .+ .+-||.+.-.++++.+..-=+.
T Consensus 86 v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~-~n---LsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 86 VIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKS-YN---LSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeee-ec---ccCCcchhhHHHHHHHHHHHHh
Confidence 3444444444443 58999988754 466888899999999887442 34 3555555555666655443345
Q ss_pred CCCCEEEEEeE
Q 041084 180 RKGDRIWQVGF 190 (225)
Q Consensus 180 ~~Gd~vll~a~ 190 (225)
.|+..+|.++.
T Consensus 162 ~p~~~ALVVst 172 (290)
T PF08392_consen 162 HPNSYALVVST 172 (290)
T ss_pred CCCcEEEEEEE
Confidence 68899888876
No 132
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=47.95 E-value=66 Score=25.62 Aligned_cols=74 Identities=11% Similarity=0.066 Sum_probs=48.0
Q ss_pred hhHhhhhccchhhhhhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEE
Q 041084 106 TIFKMKINPYVPDFKLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRI 185 (225)
Q Consensus 106 ~v~~~a~~~~~~~~~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~v 185 (225)
.+|+...+. .....+-||-|+...--...+..+++-.|+|.+++. .. |. +..=...+++ .-+++.++
T Consensus 30 klf~ev~e~-iqeL~d~V~i~IASgDr~gsl~~lae~~gi~~~rv~-a~---------a~-~e~K~~ii~e-Lkk~~~k~ 96 (152)
T COG4087 30 KLFSEVSET-IQELHDMVDIYIASGDRKGSLVQLAEFVGIPVERVF-AG---------AD-PEMKAKIIRE-LKKRYEKV 96 (152)
T ss_pred EEcHhhHHH-HHHHHHhheEEEecCCcchHHHHHHHHcCCceeeee-cc---------cC-HHHHHHHHHH-hcCCCcEE
Confidence 555555554 444445588888888788899999999999999884 22 22 3333333332 11388999
Q ss_pred EEEeEcC
Q 041084 186 WQVGFGS 192 (225)
Q Consensus 186 ll~a~G~ 192 (225)
+|+|-|+
T Consensus 97 vmVGnGa 103 (152)
T COG4087 97 VMVGNGA 103 (152)
T ss_pred EEecCCc
Confidence 8876654
No 133
>PRK08329 threonine synthase; Validated
Probab=46.25 E-value=27 Score=31.55 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=28.3
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
||....++..+.++|.++++++|+++-.|.|+.
T Consensus 313 sa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 313 SAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 566667788888899999999999999999975
No 134
>PLN02932 3-ketoacyl-CoA synthase
Probab=45.79 E-value=68 Score=30.63 Aligned_cols=67 Identities=9% Similarity=0.086 Sum_probs=40.9
Q ss_pred hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~ 190 (225)
++|||++|... ..+.+-..+.++||+.++-.. .. .+-+|.+.-.++|..+..-=+..++.++|+++.
T Consensus 167 p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~-fd---L~gmGCSggl~aL~lA~~ll~~~~~~~aLVVst 237 (478)
T PLN02932 167 PSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS-LN---LGGMGCSAGVIAIDAAKSLLQVHRNTYALVVST 237 (478)
T ss_pred HHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE-EE---eccchhhhHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 58999998743 345666678999999765321 23 244666666677766644112234566666554
No 135
>PLN03168 chalcone synthase; Provisional
Probab=45.74 E-value=88 Score=28.81 Aligned_cols=69 Identities=14% Similarity=0.053 Sum_probs=42.8
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||++|+... .+..--.+.++||+++.-. ..+ -.|+++++-..+|..+..-=+-.++.+||+++.-.
T Consensus 120 ~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~--r~~--d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~ 192 (389)
T PLN03168 120 KSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK--RVM--MYQTGCFGGASVLRVAKDLAENNKGARVLAVASEV 192 (389)
T ss_pred HHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce--eee--eeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeh
Confidence 589999988643 3445557899999976521 011 24566677777776654411224678888877543
No 136
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=44.31 E-value=22 Score=35.10 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=39.5
Q ss_pred hhcccEEEEecCCH------------HHHHHHHHHcCCCcCcccccccccc-----------cccccchHHHHHHHHHHc
Q 041084 120 KLAFEHFCVHVGGK------------AVLDEMEKKVQLSEWHMEPMTLYRF-----------GNTSSSSSWYELAYSEAK 176 (225)
Q Consensus 120 ~~dId~~i~Hq~~~------------~i~~~v~~~lgl~~e~~~~~~~~~~-----------GNt~sasip~~L~~~~~~ 176 (225)
..|.|-|+|||... ..++.+++.+|+.-.-. ...-.+| +|+||+...+.|++..++
T Consensus 115 sSDLD~WVCh~~~Ls~~er~~L~rKc~lie~WA~s~gvEvnff-L~D~~RFr~~~~s~~l~gedcGstQh~LLLDEFYRS 193 (853)
T COG3072 115 SSDLDIWVCHQDWLSTEERQLLQRKCSLLEDWAASQGVEVNFF-LIDENRFRQHNESGSLGGEDCGSTQHILLLDEFYRS 193 (853)
T ss_pred ccccceEEEecccCChhHHHHHHHHHHHHHHHHHHhCceEEEE-EecHHhhhcccccCCCCCcCCcchhhhHHHHHHHHH
Confidence 58999999999753 35566788888543322 1222222 589999999999998775
No 137
>PLN03170 chalcone synthase; Provisional
Probab=44.08 E-value=72 Score=29.53 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=40.9
Q ss_pred hhcccEEEEec----CCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHV----GGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq----~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~ 190 (225)
.+|||++|.-. ..+..--.+.++||+++.-.. .. -.|+++++-..+|..+..-=+-.++.+||+++.
T Consensus 125 ~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r-~~---d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~ 195 (401)
T PLN03170 125 KSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR-LM---MYQQGCFAGGTVLRVAKDLAENNRGARVLVVCS 195 (401)
T ss_pred HHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH-HH---hhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 57999987533 234555578999999776210 01 245666777777766544112245778888754
No 138
>PLN03171 chalcone synthase-like protein; Provisional
Probab=43.54 E-value=74 Score=29.38 Aligned_cols=69 Identities=13% Similarity=0.010 Sum_probs=41.2
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||++|.... .+..--.+.++||++..-.. .. ..++ ++++...+|..+..-=.-.+..+||+++.-.
T Consensus 127 ~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~-~~--~~~~-gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~ 199 (399)
T PLN03171 127 AADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRR-TM--LHLN-GCFAGAAALRLAKDLAENNRGARVLVVAAEI 199 (399)
T ss_pred HHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccce-ee--ccCC-ccHHHHHHHHHHHHHHHhCCCCeEEEEEEec
Confidence 579999987222 23444468899999765321 11 2233 7777777777664411123567788876655
No 139
>PLN03169 chalcone synthase family protein; Provisional
Probab=43.28 E-value=87 Score=28.79 Aligned_cols=69 Identities=12% Similarity=-0.034 Sum_probs=39.9
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||++|.... .+..--.+.++||+++.-.. .+ --++++++-..+|..+..-=+-.+..+||+++.-.
T Consensus 125 ~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~--~~--d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~ 197 (391)
T PLN03169 125 VSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQR--VM--LYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSET 197 (391)
T ss_pred HHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCccee--ee--cccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEc
Confidence 589999877543 34444578899999875321 11 12355566666665554311113567788776544
No 140
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=42.63 E-value=6.8 Score=26.15 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCCcCccccccccccccccc
Q 041084 133 KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSS 163 (225)
Q Consensus 133 ~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~s 163 (225)
..-+..++++||++++++. ..+++.||...
T Consensus 20 ~~ev~ywa~~~gvt~~~L~-~AV~~vG~~~~ 49 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQLR-EAVRAVGNSRA 49 (57)
T ss_pred HHHHHHHHHHHCcCHHHHH-HHHHHHCcCHH
Confidence 3456789999999999995 88999999854
No 141
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=42.38 E-value=94 Score=27.32 Aligned_cols=64 Identities=9% Similarity=0.028 Sum_probs=35.9
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~ 190 (225)
++|||+++.... .+..-..+.+.||++........+. .++++...+|..+ ++.| +.+++|+++.
T Consensus 71 ~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~----~~C~~~~~al~~a~~~l~~g---~~~~~Lvv~~ 142 (329)
T PRK07204 71 LDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN----STCLSFITALDTISYAIECG---RYKRVLIISS 142 (329)
T ss_pred HHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc----chhHHHHHHHHHHHHHHHCC---CCCEEEEEEe
Confidence 689999888542 2344456889999987533112222 2445555555544 3333 3556666653
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=41.56 E-value=22 Score=30.12 Aligned_cols=31 Identities=29% Similarity=0.428 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 165 SSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 165 sip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
|.|.....+.+.=.+++|++||=+|.|+|+.
T Consensus 56 s~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~ 86 (209)
T COG2518 56 SAPHMVARMLQLLELKPGDRVLEIGTGSGYQ 86 (209)
T ss_pred cCcHHHHHHHHHhCCCCCCeEEEECCCchHH
Confidence 3355555555555789999999999999998
No 143
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=39.92 E-value=1.3e+02 Score=27.43 Aligned_cols=67 Identities=4% Similarity=-0.046 Sum_probs=37.7
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||.++.... .+.....+.+.||++.... ..+ |.++++-..+|..+...=+..+.+++|+++.-.
T Consensus 82 ~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~--~~v----~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~ 153 (378)
T PRK06816 82 LGDIELLACGTSQPDQLMPGHASMVHGELGAPPIEV--VSS----AGVCAAGMMALKYAYLSVKAGESRNAVATASEL 153 (378)
T ss_pred HHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCce--eee----cCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEcc
Confidence 689999887432 2333345778899875322 222 344556566666553311112457888777543
No 144
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=37.96 E-value=1.6e+02 Score=25.69 Aligned_cols=63 Identities=8% Similarity=0.127 Sum_probs=35.6
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~G 191 (225)
++|||.++.... .+.....+.+.||++.... ..+. .++++...+|..+ ++.| +.+++|+++..
T Consensus 72 ~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~~--~~v~----~~C~~~~~al~~A~~~l~~g---~~~~~Lvv~~e 142 (325)
T PRK12879 72 AEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAAA--FDIN----AACAGFLYGLETANGLITSG---LYKKVLVIGAE 142 (325)
T ss_pred HHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE--EEEC----ccchHHHHHHHHHHHHHHcC---CCCEEEEEEeh
Confidence 588999886432 2455567889999875322 2332 2334444444443 3343 34677766543
No 145
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=37.88 E-value=1.1e+02 Score=27.74 Aligned_cols=61 Identities=16% Similarity=0.182 Sum_probs=35.6
Q ss_pred hhcccEEEEecCC-----HHHHHHHHHHcCCCcCcccccccccccccccchHHHHHH---HHHHcCCCCCCCEEEEEe
Q 041084 120 KLAFEHFCVHVGG-----KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELA---YSEAKGRIRKGDRIWQVG 189 (225)
Q Consensus 120 ~~dId~~i~Hq~~-----~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~---~~~~~g~l~~Gd~vll~a 189 (225)
++|||++|+...+ +..--.+.++||+++.-.. ..+ |.++++...+|. .+++.| +++ +|+++
T Consensus 79 ~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~-~di----~~~C~g~~~aL~~A~~~i~~~---~~~-~LVv~ 147 (353)
T PRK12880 79 KNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIA-FDL----GQACAGYLYGLFVAHSLIQSG---LGK-ILLIC 147 (353)
T ss_pred HHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceE-Eeh----hhhhHHHHHHHHHHHHHHHcC---CCC-EEEEE
Confidence 6899999986554 4555578899999764321 222 234444444553 444443 344 66554
No 146
>PRK12404 stage V sporulation protein AD; Provisional
Probab=36.25 E-value=2e+02 Score=26.26 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=45.6
Q ss_pred hhcccEEEEecCC-HHH-HHHHHHHcCCCcCcccccccccccccccchHHHHHHHH-HHcCCCCCCCEEEEEeEcCCccc
Q 041084 120 KLAFEHFCVHVGG-KAV-LDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS-EAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 120 ~~dId~~i~Hq~~-~~i-~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~-~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
++|||+++..... ..+ -..+++.||+|- +.-||-+++.+--+.+... ++.| ..|+||.++ .+=+..
T Consensus 73 ~~DID~i~vGdL~nQ~ipssfvar~LGIP~-------~gV~gACSTg~eAL~lAa~~VaSG---~Ad~VLavt-sSH~~~ 141 (334)
T PRK12404 73 KEDIQFFLAGDLMNQITPTSFAARTLGIPY-------LGLFGACSTSMEGLALAALIVNSG---GAKYVLTGA-SSHNAA 141 (334)
T ss_pred HHHCCEEEEEecCCCcCcHHHHHHHhCCCc-------cceeecCHHHHHHHHHHHHHHHcC---CCCEEEEEe-Ccccch
Confidence 6899999995432 111 126788999654 3445666666555555543 3343 345555443 332222
Q ss_pred cCCCCcCCCcchhcccCCCCCCCCCC
Q 041084 197 IKPEQEKNRWTDEIDDFPVHVPNIAP 222 (225)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (225)
+..-=|||+|-++-.|
T Consensus 142 ----------aErqfR~P~eyG~Qrp 157 (334)
T PRK12404 142 ----------VEKQFRYPTEYGGQKP 157 (334)
T ss_pred ----------hhhhccCcccccCcCC
Confidence 2333477777766555
No 147
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.15 E-value=1.5e+02 Score=27.03 Aligned_cols=83 Identities=10% Similarity=0.099 Sum_probs=48.9
Q ss_pred hhhhhHhhhhccchhhhhhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCC
Q 041084 103 VARTIFKMKINPYVPDFKLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGR 178 (225)
Q Consensus 103 ~g~~v~~~a~~~~~~~~~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~ 178 (225)
.+.++.+.++.. .+...+|||.+++-.. -+.+.-.++++||+++.--. ..+--.|-.++++ .|.++.+-=+
T Consensus 79 l~v~a~r~aL~~-~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~R-vpv~glGCaaga~---glara~~y~r 153 (356)
T COG3424 79 LGVDALRRALDG-SPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRR-VPVWGLGCAAGAA---GLARARDYCR 153 (356)
T ss_pred HHHHHHHHHhcc-CCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccce-eeeecchhhhhhh---HHHHHHHHHh
Confidence 344555555555 4444799999998654 34556689999999987442 3333344444444 4444444223
Q ss_pred CCCCCEEEEEeE
Q 041084 179 IRKGDRIWQVGF 190 (225)
Q Consensus 179 l~~Gd~vll~a~ 190 (225)
-.|-.+|++++.
T Consensus 154 a~P~~~vlvV~v 165 (356)
T COG3424 154 AAPDANVLVVCV 165 (356)
T ss_pred hCccceEEEEEe
Confidence 345566666553
No 148
>PLN02854 3-ketoacyl-CoA synthase
Probab=35.99 E-value=1.1e+02 Score=29.69 Aligned_cols=66 Identities=8% Similarity=0.023 Sum_probs=39.1
Q ss_pred hhcccEEEEecC----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEe
Q 041084 120 KLAFEHFCVHVG----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVG 189 (225)
Q Consensus 120 ~~dId~~i~Hq~----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a 189 (225)
++|||++|.... .+..-..+.+++|+..+-.. .. .+-+|++.-.++|+.+..-=+..++.++|+++
T Consensus 207 p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~a-fd---LsgmGCSggl~aL~lA~~lL~~~~~~~aLVVs 276 (521)
T PLN02854 207 PRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKS-YN---LGGMGCSAGLISIDLANDLLKANPNSYAVVVS 276 (521)
T ss_pred HHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceE-Ee---cccchhhhHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 589999998432 34556678999998765221 22 23355666666666654311223566666655
No 149
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=34.03 E-value=1.6e+02 Score=34.28 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=33.9
Q ss_pred hhcccEEEEecCCHHH-----HHHHHHHcCCCc---Ccccc-cccccccccccchHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAV-----LDEMEKKVQLSE---WHMEP-MTLYRFGNTSSSSSWYELAY 172 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i-----~~~v~~~lgl~~---e~~~~-~~~~~~GNt~sasip~~L~~ 172 (225)
.+||+++-.|--+... ++.+.+.++-.. ..+.. .+-..+||+-+|+=...|..
T Consensus 332 p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik 393 (2582)
T TIGR02813 332 PHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIK 393 (2582)
T ss_pred HHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHH
Confidence 6899999999866544 345666676432 12211 34467899988887666644
No 150
>PRK06260 threonine synthase; Validated
Probab=32.48 E-value=57 Score=29.99 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=28.2
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+|+..+.++..+.++|.++++++|+++-.|.|+.
T Consensus 336 ssaaalAa~~~l~~~g~i~~~~~VV~i~tG~glK 369 (397)
T PRK06260 336 ASAASVAGLIKLVEEGVIDKDERVVCITTGHLLK 369 (397)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCccC
Confidence 3555666777777888899999999999999985
No 151
>PLN02569 threonine synthase
Probab=31.25 E-value=56 Score=31.18 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=28.5
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCccc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNT 196 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~ 196 (225)
+||..+.++..+.++|.++++++|+++..|.|+..
T Consensus 407 ssAaalAal~kl~~~g~i~~~~~VV~i~Tg~GlK~ 441 (484)
T PLN02569 407 HTGVALAALKKLRASGVIGPTDRTVVVSTAHGLKF 441 (484)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEEEeCCCcccC
Confidence 44555557777778888999999999999999983
No 152
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=31.17 E-value=2.1e+02 Score=24.71 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=34.4
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~ 190 (225)
++|||.++.-.. .......+.+.||++.... ..+. .++++...+|..+ ++.| +.+++|+++.
T Consensus 69 ~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~~--~~v~----~~C~s~~~al~~A~~~i~~g---~~~~vLvv~~ 138 (320)
T cd00830 69 ADDIDLIIVATSTPDYLFPATACLVQARLGAKNAAA--FDIN----AACSGFLYGLSTAAGLIRSG---GAKNVLVVGA 138 (320)
T ss_pred HHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcE--eecc----ccchHHHHHHHHHHHHHHcC---CCCEEEEEEe
Confidence 588999877322 2445567889999973222 2332 2334444444443 4444 3467776543
No 153
>PRK06437 hypothetical protein; Provisional
Probab=31.07 E-value=85 Score=21.28 Aligned_cols=44 Identities=18% Similarity=0.235 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCC
Q 041084 136 LDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSG 193 (225)
Q Consensus 136 ~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G 193 (225)
+..+.+.||++++.+. +..-|.... .+-.+++||+|-++.+=+|
T Consensus 23 v~dLL~~Lgi~~~~va---V~vNg~iv~-----------~~~~L~dgD~Veiv~~V~G 66 (67)
T PRK06437 23 VNDIIKDLGLDEEEYV---VIVNGSPVL-----------EDHNVKKEDDVLILEVFSG 66 (67)
T ss_pred HHHHHHHcCCCCccEE---EEECCEECC-----------CceEcCCCCEEEEEecccC
Confidence 4567788999887662 223333332 3447899999999877544
No 154
>TIGR02609 doc_partner putative addiction module antidote. Members of this protein family are putative addiction module antidote proteins that appear recurringly in two-gene operons with members of the Doc (death-on-curing) family TIGR01550. Members of this family contain a SpoVT/AbrB-like domain (pfam04014). Note that the gene pairs with a member of this family tend to be found on bacterial chromosomes, not on plasmids.
Probab=31.04 E-value=42 Score=23.35 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=32.5
Q ss_pred ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc
Q 041084 154 TLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 154 ~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~ 197 (225)
.+.+.||..+.++|-.+.+.+ .+++||.|-+.--+.++.+.
T Consensus 2 ki~k~GNS~~vtIPk~i~~~l---gl~~Gd~v~v~~~~~~iii~ 42 (74)
T TIGR02609 2 KIRKVGNSLVVTLPKEVLESL---GLKEGDTLYVDEEEGGLKLK 42 (74)
T ss_pred cEEEECCeeEEEECHHHHHHc---CcCCCCEEEEEEECCEEEEE
Confidence 357889999999998887764 57899999887777766644
No 155
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=30.84 E-value=60 Score=30.07 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=31.0
Q ss_pred cccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc
Q 041084 161 TSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 161 t~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~ 197 (225)
.+||...-+|..+.++|.++++++|+++-.|.|+...
T Consensus 347 pa~A~alAal~k~~~~g~i~~~~~Vv~vlTG~glK~~ 383 (398)
T TIGR03844 347 PAAAVAVAALVKAVESGFIGPDDDILLNITGGGYKRL 383 (398)
T ss_pred ccHHHHHHHHHHHHHhCCCCCCCeEEEEECCcchhhH
Confidence 4566667778888888999999999999999998865
No 156
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=29.71 E-value=1.8e+02 Score=27.12 Aligned_cols=67 Identities=13% Similarity=-0.033 Sum_probs=37.4
Q ss_pred hhcccEEEEecCCH-----HHH-HHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVGGK-----AVL-DEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~~~-----~i~-~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||.++.-+.+. .+. ..+...+|++. +.. .++..-|++++.++-. -.++++.|. -|.||.+++-.
T Consensus 56 ~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~-~~v~~~~aSg~~ai~~-A~~~I~sG~---~~~vLv~G~e~ 128 (430)
T PRK06365 56 LADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPS-KRIEGGGATGGLAFQA-GYEEIASGR---MDCVAVYGFET 128 (430)
T ss_pred HHHcCEEEEecccccccccchhhHHHHHhcCCCC-Cce-EEEeCCcHHHHHHHHH-HHHHHHcCC---CCEEEEEEeee
Confidence 68999988755421 122 23578999977 331 4555544444433322 233344553 47888777654
No 157
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=29.40 E-value=2.1e+02 Score=23.60 Aligned_cols=62 Identities=16% Similarity=0.149 Sum_probs=35.3
Q ss_pred hhcccEEEEecCC-----HHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVGG-----KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~~-----~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~ 190 (225)
.+|||.+++.+.. ......+...+|++.-.. .++. . +.++...+|..+ ++.| +-++++.++.
T Consensus 26 ~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~--~~i~-~---~C~s~~~al~~A~~~i~~g---~~~~~lv~~~ 95 (254)
T cd00327 26 KGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPA--YSVN-Q---ACATGLTALALAVQQVQNG---KADIVLAGGS 95 (254)
T ss_pred CCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCc--ceec-c---HhHHHHHHHHHHHHHHHCC---CCCEEEEEec
Confidence 5789999886542 334456889999962212 3443 2 333444444443 4444 3477777665
No 158
>PRK04262 hypothetical protein; Provisional
Probab=29.32 E-value=1.6e+02 Score=26.25 Aligned_cols=64 Identities=9% Similarity=-0.015 Sum_probs=35.3
Q ss_pred hhcccEEEEecCC-----HHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGG-----KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~-----~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~G 191 (225)
++|||.++..... +..-..+.+.||++..... ..+ +.++++-..+|..+ ++.| +.+++|+++..
T Consensus 70 ~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~-~dv----~~~C~~~~~aL~~A~~~i~sg---~~~~aLVv~~e 141 (347)
T PRK04262 70 PKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTA-ADL----EFACKAGTAALQAAMGLVKSG---MIKYALAIGAD 141 (347)
T ss_pred HHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceE-EEH----HHhHHHHHHHHHHHHHHHHcC---CCCEEEEEEEe
Confidence 6899998774322 1233357799999764331 222 22344444445444 4444 46777776644
No 159
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=29.31 E-value=2.3e+02 Score=24.48 Aligned_cols=63 Identities=13% Similarity=0.021 Sum_probs=34.8
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHH---HHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYS---EAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~---~~~g~l~~Gd~vll~a~G 191 (225)
++|||.++.-.. .......+.+.||++ ... ...+. + ++++...+|..+ ++.| ..+++++++.-
T Consensus 67 ~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~-~~~v~--~--~C~s~~~al~~A~~~i~~g---~~~~vlvv~~e 137 (324)
T cd00827 67 PDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAE-AFDLK--Q--ACYGGTAALQLAANLVESG---PWRYALVVASD 137 (324)
T ss_pred HHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCc-eeehh--h--hhHHHHHHHHHHHHHHHcC---CCCEEEEEEEH
Confidence 689999986321 234556788999997 222 13333 2 233333344333 3444 34777776653
No 160
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=29.13 E-value=32 Score=30.16 Aligned_cols=18 Identities=22% Similarity=0.759 Sum_probs=16.0
Q ss_pred CCCCCCEEEEEeEcCCcc
Q 041084 178 RIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 178 ~l~~Gd~vll~a~G~G~s 195 (225)
+.++|++||=++.|-|++
T Consensus 131 ~~~~G~rVLDtC~GLGYt 148 (287)
T COG2521 131 KVKRGERVLDTCTGLGYT 148 (287)
T ss_pred ccccCCEeeeeccCccHH
Confidence 456799999999999999
No 161
>PF04014 Antitoxin-MazE: Antidote-toxin recognition MazE; InterPro: IPR007159 This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation []. AbrB is thought to interact directly with the transcription initiation regions of genes under its control []. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins []. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator []. DNA-binding activity in this AbrB homologue requires hexamerisation []. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins [].; PDB: 2L66_A 2GLW_A 3TND_D 2W1T_B 2RO5_B 2FY9_A 2RO3_B 1UB4_C 3ZVK_G 1YFB_B ....
Probab=28.81 E-value=66 Score=20.03 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=28.0
Q ss_pred cccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcCC
Q 041084 157 RFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGSG 193 (225)
Q Consensus 157 ~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G 193 (225)
+.||.+..++|-.+.+.+ .+++||.+.+.--+-|
T Consensus 2 kvg~s~~v~iPk~~~~~l---~l~~Gd~v~i~~~~~g 35 (47)
T PF04014_consen 2 KVGNSGQVTIPKEIREKL---GLKPGDEVEIEVEGDG 35 (47)
T ss_dssp EETTCSEEEE-HHHHHHT---TSSTTTEEEEEEETTS
T ss_pred EECCCceEECCHHHHHHc---CCCCCCEEEEEEeCCC
Confidence 468999999998888764 6789999999988887
No 162
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=28.77 E-value=95 Score=23.13 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=30.9
Q ss_pred hhcccEEEEecCCHHHHHH-----HHHHcCCCc--Ccccc-cccccccccccchHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGKAVLDE-----MEKKVQLSE--WHMEP-MTLYRFGNTSSSSSWYELAYSE 174 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~-----v~~~lgl~~--e~~~~-~~~~~~GNt~sasip~~L~~~~ 174 (225)
.+|||++..|-.+....+. +.+.++-.. ..+.. ..-..+|++.+++-.+.|...+
T Consensus 42 ~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 42 PEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHH
T ss_pred cccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHH
Confidence 6899999999998886553 445555332 12311 3346789999998887776644
No 163
>PRK09450 cyaA adenylate cyclase; Provisional
Probab=28.55 E-value=50 Score=33.74 Aligned_cols=64 Identities=11% Similarity=0.044 Sum_probs=43.1
Q ss_pred hhcccEEEEecCCH------------HHHHHHHHHcCCCc-------Cccccccccccc------ccccchHHHHHHHHH
Q 041084 120 KLAFEHFCVHVGGK------------AVLDEMEKKVQLSE-------WHMEPMTLYRFG------NTSSSSSWYELAYSE 174 (225)
Q Consensus 120 ~~dId~~i~Hq~~~------------~i~~~v~~~lgl~~-------e~~~~~~~~~~G------Nt~sasip~~L~~~~ 174 (225)
..|+|.|++|+.+. ..++.+++.+|++- +++. -.+++ |+|||-.++.|++..
T Consensus 112 ~SDlDiWvCh~~~L~~~~~~~L~~K~~li~~WA~~~gvEv~FFLmd~~~Fr---~~~~~~~l~~E~cGSaQh~LLLDEFY 188 (830)
T PRK09450 112 SSDLDIWVCHRPWLDAEERQLLQRKCSLLEQWAASLGVEVNFFLMDEERFR---HNESGSALGGEDCGSTQHILLLDEFY 188 (830)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHhh---cccccccCCCCCChHHHHHHHHHHHH
Confidence 58999999999753 23445677777543 3332 11233 599999999999999
Q ss_pred HcCCCCCCCEEE
Q 041084 175 AKGRIRKGDRIW 186 (225)
Q Consensus 175 ~~g~l~~Gd~vl 186 (225)
++...-.|.+.+
T Consensus 189 RTai~LAGk~~l 200 (830)
T PRK09450 189 RTAIRLAGKRPL 200 (830)
T ss_pred HHhHHhcCCccc
Confidence 876544555543
No 164
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=28.35 E-value=2.2e+02 Score=26.02 Aligned_cols=67 Identities=10% Similarity=-0.029 Sum_probs=37.9
Q ss_pred hhcccEEEEecCC-H-----HHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 120 KLAFEHFCVHVGG-K-----AVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 120 ~~dId~~i~Hq~~-~-----~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
++|||.++..... . ..-..+.+.||+..... ..+...+.++... +..-..++++| .-|.||+++...
T Consensus 43 ~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~--~~v~~~casg~~a-l~~A~~~I~sG---~~~~vLVvg~e~ 115 (386)
T PRK08313 43 WDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPL--IRVHTAGSVGGST-AVVAASLVQSG---VYRRVLAVAWEK 115 (386)
T ss_pred HHHCCEEEEeccccccccccCchHHHHHhcCCCCCce--EEEeccCHHHHHH-HHHHHHHHHCC---CCCEEEEEEEEE
Confidence 6899999875311 0 01135789999965433 3443334344333 33334455555 358888888764
No 165
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=28.22 E-value=2.4e+02 Score=25.59 Aligned_cols=63 Identities=17% Similarity=0.085 Sum_probs=34.3
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHH---HHHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAY---SEAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~---~~~~g~l~~Gd~vll~a~ 190 (225)
++|||.++..+. .......+...+|++..... ..+. ++++|-..+|.. +++.|. -|.||.+++
T Consensus 41 ~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~-~~v~----~~c~s~~~al~~A~~~I~sG~---~~~vLv~g~ 111 (386)
T cd00751 41 PEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPA-TTVN----RVCGSGLQAVALAAQSIAAGE---ADVVVAGGV 111 (386)
T ss_pred HHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCch-hhhc----cccHHHHHHHHHHHHHHHCCC---CCeEEEeee
Confidence 689999987532 23334457788999763221 2332 233333344443 444553 377776554
No 166
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=27.35 E-value=2.1e+02 Score=25.92 Aligned_cols=62 Identities=8% Similarity=0.045 Sum_probs=34.4
Q ss_pred hhcccEEEEecCCH----HHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHH---HcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVGGK----AVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSE---AKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~~~----~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~---~~g~l~~Gd~vll~a~ 190 (225)
++|||+++...... ..--.+.+.||+..-.. ..+. .++++...+|..+. +.| +.+++|+++.
T Consensus 115 ~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~~--~dv~----~~Ca~~~~aL~~A~~~l~~g---~~~~vLVv~~ 183 (379)
T PLN02326 115 PEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNALA--FDLT----AACSGFVLGLVTAARFIRGG---GYKNVLVIGA 183 (379)
T ss_pred HHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCce--eecc----ccchHHHHHHHHHHHHHHcC---CCCEEEEEEe
Confidence 68999998854321 23346889999873222 2232 34555555555543 333 3456666554
No 167
>PRK08197 threonine synthase; Validated
Probab=26.47 E-value=78 Score=29.07 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=29.2
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~ 197 (225)
+|+....++..+.+++.++++++|+++-.|.|+...
T Consensus 349 ssaaala~~~~l~~~~~~~~~~~Vv~v~tG~g~k~~ 384 (394)
T PRK08197 349 EGAATFAAARQLRESGWLKGDERVVLFNTGSGLKYP 384 (394)
T ss_pred hHHHHHHHHHHHHHcCCcCCCCcEEEEeCCCCcCch
Confidence 466666777777788889999999999999998743
No 168
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=26.35 E-value=3.2e+02 Score=23.64 Aligned_cols=28 Identities=4% Similarity=-0.071 Sum_probs=19.3
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSE 147 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~ 147 (225)
++|||.++.... .......+.+.+|+..
T Consensus 71 ~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~ 103 (319)
T PRK09352 71 PEDIDLIIVATTTPDYAFPSTACLVQARLGAKN 103 (319)
T ss_pred HHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCC
Confidence 578999887433 2344567889999844
No 169
>PRK07591 threonine synthase; Validated
Probab=26.18 E-value=87 Score=29.15 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=29.8
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~ 197 (225)
+|+....++..+.++|.++++++|+++-.|.|+...
T Consensus 359 ssaaalAal~~l~~~g~i~~~~~VV~i~tG~G~kd~ 394 (421)
T PRK07591 359 AGGVTVAVLKKLVEAGKIDPDEETVVYITGNGLKTL 394 (421)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCccCCH
Confidence 456666678888888999999999999999998854
No 170
>PRK05638 threonine synthase; Validated
Probab=25.30 E-value=92 Score=29.11 Aligned_cols=36 Identities=33% Similarity=0.353 Sum_probs=29.2
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcccc
Q 041084 162 SSSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFNTI 197 (225)
Q Consensus 162 ~sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s~~ 197 (225)
+||....++..+.++|.++++++|+++-.|.|+...
T Consensus 324 ssaaa~Aa~~~~~~~g~i~~~~~Vv~i~tG~g~k~~ 359 (442)
T PRK05638 324 SSAVVMPALLKLGEEGYIEKGDKVVLVVTGSGLKGY 359 (442)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCC
Confidence 355556677777788889999999999999999854
No 171
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=23.68 E-value=4.3e+02 Score=24.60 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=17.1
Q ss_pred CccceeeeecceeeeEEeccC
Q 041084 13 MVLANGLFREGDAAILLSNRS 33 (225)
Q Consensus 13 ~~~t~~LFGDGAaAvvL~~~~ 33 (225)
+...++...|||+|+||...+
T Consensus 257 t~~n~~~~~DGAaAvvl~s~~ 277 (427)
T PRK09268 257 TAGNSTPLTDGASVVLLASEE 277 (427)
T ss_pred eccccCCCCCceEEEEEecHH
Confidence 455678899999999999764
No 172
>PRK07855 lipid-transfer protein; Provisional
Probab=23.49 E-value=2.7e+02 Score=25.46 Aligned_cols=66 Identities=9% Similarity=0.015 Sum_probs=36.5
Q ss_pred hhcccEEEEecCCHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeE
Q 041084 120 KLAFEHFCVHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGF 190 (225)
Q Consensus 120 ~~dId~~i~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~ 190 (225)
++|||.++.-......-..+.+.||+..-+. ...+..-|.++++. ...-..+++.|. =|.||.++.
T Consensus 43 ~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~-~~~v~~gg~sg~~~-~~~A~~~I~sG~---~d~vLv~g~ 108 (386)
T PRK07855 43 PSDVDGLVTFTMDTNPEIAVARALGIGELKF-FSRIHYGGGAACAT-VQQAAMAVATGV---ADVVVCYRA 108 (386)
T ss_pred HHHCCEEEEecCccccHHHHHHHCCCCCCcc-eeeecCCcHHHHHH-HHHHHHHHHCCC---CCEEEEEee
Confidence 6889988752211111134778999976223 13444445555443 333445556664 378887665
No 173
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=22.51 E-value=3.3e+02 Score=24.85 Aligned_cols=79 Identities=11% Similarity=-0.009 Sum_probs=39.5
Q ss_pred hhHhhhhccchhhhhhcccEEEEe---cC--CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCC
Q 041084 106 TIFKMKINPYVPDFKLAFEHFCVH---VG--GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIR 180 (225)
Q Consensus 106 ~v~~~a~~~~~~~~~~dId~~i~H---q~--~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~ 180 (225)
++++.++.. ...-++|||.++.= |. +..+-..+...+|++...-. .++.+-+-+|...+ ..-..+++.|.
T Consensus 32 ~a~~~al~d-agi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~-~~v~~~caSg~~av-~~Aa~~I~sG~-- 106 (388)
T PRK06366 32 AAIKAVIDD-AKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK-YTVNVVCASGMLAV-ESAAREIMLGE-- 106 (388)
T ss_pred HHHHHHHHH-cCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc-eeeechhhHHHHHH-HHHHHHHhcCC--
Confidence 444444433 22226899999873 11 22333457788999864332 45554333332222 23334455553
Q ss_pred CCCEEEEEeE
Q 041084 181 KGDRIWQVGF 190 (225)
Q Consensus 181 ~Gd~vll~a~ 190 (225)
-|.|+..++
T Consensus 107 -~d~vla~G~ 115 (388)
T PRK06366 107 -RDLVIAGGM 115 (388)
T ss_pred -CCEEEEEee
Confidence 367764443
No 174
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=22.03 E-value=3.9e+02 Score=23.10 Aligned_cols=28 Identities=7% Similarity=-0.059 Sum_probs=20.2
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSE 147 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~ 147 (225)
++|||.++.... .......+.+.||++.
T Consensus 70 ~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~ 102 (318)
T TIGR00747 70 KDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG 102 (318)
T ss_pred HHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC
Confidence 588999987543 3445567889999875
No 175
>COG0776 HimA Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair]
Probab=21.85 E-value=1.1e+02 Score=22.65 Aligned_cols=45 Identities=27% Similarity=0.348 Sum_probs=28.7
Q ss_pred HHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEcC
Q 041084 134 AVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFGS 192 (225)
Q Consensus 134 ~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G~ 192 (225)
.+++.++++.++...+.. ..+ =..|+...+ .|..|+.|-|.+||.
T Consensus 6 eli~~ia~~~~l~k~~a~-~~v-----------~~~~~~i~~--aL~~G~~V~l~gFG~ 50 (94)
T COG0776 6 ELIDAIAEKAGLSKKDAE-EAV-----------DAFLEEITE--ALAKGERVELRGFGT 50 (94)
T ss_pred HHHHHHHHHcCCCHHHHH-HHH-----------HHHHHHHHH--HHHcCCeEEEeeeee
Confidence 567888888887775552 221 112333322 456899999999996
No 176
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=21.73 E-value=3.7e+02 Score=23.54 Aligned_cols=63 Identities=11% Similarity=0.086 Sum_probs=33.3
Q ss_pred hhcccEEEEecCC----HHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHH---HHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGG----KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAY---SEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~----~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~---~~~~g~l~~Gd~vll~a~G 191 (225)
++|||.++..... ....-.+.+.||+..... ..+.. ++++-..+|.. +++.| ..+++|+++.-
T Consensus 70 ~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~~--~~v~~----~Casg~~al~~A~~~i~sg---~~~~~Lvv~~e 139 (326)
T CHL00203 70 PLEIDLIILATSTPDDLFGSASQLQAEIGATRAVA--FDITA----ACSGFILALVTATQFIQNG---SYKNILVVGAD 139 (326)
T ss_pred HHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCce--eeecc----cchhHHHHHHHHHHHHHcC---CCCEEEEEEeh
Confidence 6899999875321 112235788899864322 23322 33443334433 34444 34667776653
No 177
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=21.41 E-value=1e+02 Score=25.56 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=25.8
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 164 SSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 164 asip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
.|.|.....+++.-.+++|++||=+|.|+|+.
T Consensus 59 ~~~p~~~~~~~~~l~~~~g~~VLdIG~GsG~~ 90 (212)
T PRK13942 59 ISAIHMVAIMCELLDLKEGMKVLEIGTGSGYH 90 (212)
T ss_pred eCcHHHHHHHHHHcCCCCcCEEEEECCcccHH
Confidence 45577777777766788999999999999987
No 178
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=20.85 E-value=3e+02 Score=25.26 Aligned_cols=67 Identities=7% Similarity=-0.100 Sum_probs=37.5
Q ss_pred hhcccEEEEecCC-----HHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVGG-----KAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~~-----~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
++|||.++.-+.. ..+-..+...+|++...-. .++.+...+|...+- .-...++.|. .|.+|.+++-
T Consensus 45 ~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~-~~V~~~CaSg~~Al~-~A~~~I~sG~---~d~vLvvG~E 116 (393)
T PRK08235 45 AEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT-ETVNKVCASGLRAVT-LADQIIRAGD---ASVIVAGGME 116 (393)
T ss_pred HHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce-eehhhhhhHHHHHHH-HHHHHHHCCC---CCEEEEEeee
Confidence 6899999886542 2233346788999754331 455554433333333 3333445553 5777776654
No 179
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=20.72 E-value=1.1e+02 Score=27.51 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=24.1
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 163 SSSSWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 163 sasip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
..+.|..+..+++.-.+++|++||-+|.|.|..
T Consensus 62 ~~~~p~l~a~ll~~L~i~~g~~VLDIG~GtG~~ 94 (322)
T PRK13943 62 TSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYN 94 (322)
T ss_pred cCCcHHHHHHHHHhcCCCCCCEEEEEeCCccHH
Confidence 444566666666554677899999999999976
No 180
>PF13693 HTH_35: Winged helix-turn-helix DNA-binding; PDB: 1NEQ_A 1NER_A.
Probab=20.67 E-value=51 Score=23.53 Aligned_cols=33 Identities=6% Similarity=-0.107 Sum_probs=22.4
Q ss_pred EecCCHHHHHHHHHHcCCCcCcccccccccccc
Q 041084 128 VHVGGKAVLDEMEKKVQLSEWHMEPMTLYRFGN 160 (225)
Q Consensus 128 ~Hq~~~~i~~~v~~~lgl~~e~~~~~~~~~~GN 160 (225)
+++.+.+.-..|++.||++++.++|+-+..-|+
T Consensus 36 l~r~~pk~E~~IA~aLgv~P~eIWPsRY~~~~~ 68 (78)
T PF13693_consen 36 LRRPWPKGERIIADALGVPPEEIWPSRYPDDGR 68 (78)
T ss_dssp TTSS-HHHHHHHHHHTTS-HHHHSTTT-SS---
T ss_pred HcCCChHHHHHHHHHHCcCHHHhCchhhhhccc
Confidence 467788998899999999999997765554443
No 181
>PLN02765 pyruvate kinase
Probab=20.46 E-value=2.3e+02 Score=27.53 Aligned_cols=29 Identities=24% Similarity=0.194 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEEeEcCCcc
Q 041084 166 SWYELAYSEAKGRIRKGDRIWQVGFGSGFN 195 (225)
Q Consensus 166 ip~~L~~~~~~g~l~~Gd~vll~a~G~G~s 195 (225)
+-.++..+.+.|.+++||+|++++ +.|-+
T Consensus 488 ~~~a~~~~~~~g~~~~GD~vvv~~-~~g~t 516 (526)
T PLN02765 488 LKVALDHGKAAGVIKSHDRVVVCQ-KVGDS 516 (526)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEe-cCCCC
Confidence 566777888889999999999987 55544
No 182
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=20.40 E-value=3.1e+02 Score=24.55 Aligned_cols=29 Identities=3% Similarity=-0.081 Sum_probs=19.2
Q ss_pred hhcccEEEEecCCH-----HHHHHHHHHcCCCcC
Q 041084 120 KLAFEHFCVHVGGK-----AVLDEMEKKVQLSEW 148 (225)
Q Consensus 120 ~~dId~~i~Hq~~~-----~i~~~v~~~lgl~~e 148 (225)
++|||.++....+. ..-..+.+.||+.+.
T Consensus 69 ~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~ 102 (345)
T TIGR00748 69 PKDIGAVYVGSESHPYAVKPTATIVAEAIGATPD 102 (345)
T ss_pred HHHCCEEEEEecCCCccccchHHHHHHHcCCCCC
Confidence 68999998754332 122357799999654
No 183
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=20.33 E-value=3.9e+02 Score=24.43 Aligned_cols=67 Identities=15% Similarity=0.039 Sum_probs=36.3
Q ss_pred hhcccEEEEecC-----CHHHHHHHHHHcCCCcCcccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeEc
Q 041084 120 KLAFEHFCVHVG-----GKAVLDEMEKKVQLSEWHMEPMTLYRFGNTSSSSSWYELAYSEAKGRIRKGDRIWQVGFG 191 (225)
Q Consensus 120 ~~dId~~i~Hq~-----~~~i~~~v~~~lgl~~e~~~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~a~G 191 (225)
++|||.+++-.. +...-..+...+|++...- ..++.....++...+ ..-..+++.|. -|.+|.+++-
T Consensus 45 ~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p-~~~V~~~Casg~~ai-~~A~~~I~sG~---~d~vLv~G~E 116 (393)
T PRK05656 45 PAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVP-AMTLNKVCGSGLKAL-HLAAQAIRCGD---AEVIIAGGQE 116 (393)
T ss_pred HHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcc-eEEecccchhHHHHH-HHHHHHHHcCC---CCEEEEEEEh
Confidence 689999988432 2233445788999886432 135544333333332 22334455553 4677775543
Done!