Query 041088
Match_columns 119
No_of_seqs 135 out of 1001
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:42:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 2.2E-18 7.5E-23 129.0 10.0 108 3-114 123-235 (342)
2 1yvv_A Amine oxidase, flavin-c 99.5 1.2E-13 4E-18 102.2 13.6 104 4-114 120-224 (336)
3 3nks_A Protoporphyrinogen oxid 99.3 1E-11 3.4E-16 96.1 8.3 105 4-113 249-357 (477)
4 2vvm_A Monoamine oxidase N; FA 99.1 5.8E-10 2E-14 86.8 8.9 102 4-111 271-374 (495)
5 3lov_A Protoporphyrinogen oxid 99.0 5.9E-10 2E-14 86.3 8.3 76 4-84 249-324 (475)
6 3i6d_A Protoporphyrinogen oxid 99.0 9E-10 3.1E-14 84.5 9.3 76 4-82 248-323 (470)
7 3ka7_A Oxidoreductase; structu 99.0 1.3E-08 4.4E-13 77.4 12.8 100 4-109 211-316 (425)
8 2ivd_A PPO, PPOX, protoporphyr 98.9 2.7E-09 9.3E-14 82.5 8.5 77 4-81 250-329 (478)
9 1s3e_A Amine oxidase [flavin-c 98.9 9E-09 3.1E-13 80.8 10.6 102 4-108 227-332 (520)
10 2jae_A L-amino acid oxidase; o 98.9 2.6E-09 8.8E-14 83.1 7.1 104 4-110 252-359 (489)
11 2yg5_A Putrescine oxidase; oxi 98.9 9.3E-09 3.2E-13 79.0 9.5 100 4-107 227-329 (453)
12 4dsg_A UDP-galactopyranose mut 98.9 7.8E-09 2.7E-13 81.2 9.1 98 5-109 230-337 (484)
13 3nrn_A Uncharacterized protein 98.8 3.4E-08 1.2E-12 75.4 10.6 98 4-109 204-303 (421)
14 1b37_A Protein (polyamine oxid 98.6 1.2E-07 4.1E-12 73.6 8.9 78 4-82 229-310 (472)
15 2iid_A L-amino-acid oxidase; f 98.6 1.3E-07 4.4E-12 73.6 8.6 77 5-82 254-336 (498)
16 1rsg_A FMS1 protein; FAD bindi 98.6 1.5E-07 5.1E-12 73.9 8.5 79 4-83 215-307 (516)
17 2z3y_A Lysine-specific histone 98.6 2.1E-07 7.1E-12 75.7 8.3 79 4-83 411-501 (662)
18 4gut_A Lysine-specific histone 98.5 3.5E-07 1.2E-11 75.9 8.2 78 4-82 544-625 (776)
19 2xag_A Lysine-specific histone 98.5 4.4E-07 1.5E-11 76.1 8.0 79 4-83 582-672 (852)
20 1sez_A Protoporphyrinogen oxid 98.4 4.7E-07 1.6E-11 70.4 6.5 74 4-81 256-345 (504)
21 4gde_A UDP-galactopyranose mut 98.3 1.3E-06 4.4E-11 67.7 7.8 74 3-81 236-309 (513)
22 2b9w_A Putative aminooxidase; 98.2 3.5E-06 1.2E-10 64.0 7.2 64 5-71 219-282 (424)
23 3k7m_X 6-hydroxy-L-nicotine ox 98.2 4.7E-06 1.6E-10 63.4 7.8 76 5-81 219-296 (431)
24 4dgk_A Phytoene dehydrogenase; 98.1 1.5E-05 5.2E-10 61.7 8.8 79 4-82 236-318 (501)
25 3ayj_A Pro-enzyme of L-phenyla 96.9 0.0024 8.1E-08 52.8 7.3 79 5-83 362-494 (721)
26 1i8t_A UDP-galactopyranose mut 96.9 0.0004 1.4E-08 52.4 2.5 56 4-81 205-260 (367)
27 2bi7_A UDP-galactopyranose mut 96.5 0.0012 4.2E-08 50.0 2.7 49 4-78 211-260 (384)
28 1v0j_A UDP-galactopyranose mut 96.5 0.0012 4E-08 50.3 2.4 58 4-81 217-274 (399)
29 3ps9_A TRNA 5-methylaminomethy 95.7 0.026 8.7E-07 45.7 7.0 47 3-50 431-477 (676)
30 3pvc_A TRNA 5-methylaminomethy 95.7 0.023 7.8E-07 46.2 6.5 47 3-50 426-473 (689)
31 3nyc_A D-arginine dehydrogenas 95.5 0.012 4E-07 43.3 4.0 42 3-45 168-209 (381)
32 1ryi_A Glycine oxidase; flavop 95.4 0.02 6.7E-07 42.4 4.8 41 3-44 178-218 (382)
33 3dje_A Fructosyl amine: oxygen 95.4 0.022 7.5E-07 43.2 5.0 48 3-51 175-226 (438)
34 2gf3_A MSOX, monomeric sarcosi 95.2 0.06 2.1E-06 39.7 6.9 47 3-51 164-210 (389)
35 3v76_A Flavoprotein; structura 95.1 0.027 9.4E-07 43.2 4.9 42 3-45 146-187 (417)
36 3dme_A Conserved exported prot 95.0 0.031 1E-06 40.7 4.8 42 3-44 164-208 (369)
37 4a9w_A Monooxygenase; baeyer-v 94.9 0.026 8.9E-07 40.9 4.0 40 3-43 90-130 (357)
38 2e1m_B L-glutamate oxidase; L- 94.8 0.05 1.7E-06 35.7 5.0 50 33-83 7-58 (130)
39 2uzz_A N-methyl-L-tryptophan o 94.7 0.036 1.2E-06 40.8 4.4 46 4-51 164-209 (372)
40 2gv8_A Monooxygenase; FMO, FAD 94.5 0.032 1.1E-06 42.7 3.8 40 4-43 130-175 (447)
41 3d1c_A Flavin-containing putat 94.4 0.049 1.7E-06 39.9 4.6 41 3-44 102-142 (369)
42 2zbw_A Thioredoxin reductase; 94.2 0.057 1.9E-06 39.1 4.6 40 4-43 80-119 (335)
43 2ywl_A Thioredoxin reductase r 94.2 0.043 1.5E-06 36.5 3.6 39 3-43 70-108 (180)
44 2vou_A 2,6-dihydroxypyridine h 94.2 0.053 1.8E-06 40.6 4.4 42 3-44 111-152 (397)
45 1y56_B Sarcosine oxidase; dehy 94.1 0.075 2.6E-06 39.2 5.2 41 3-44 163-204 (382)
46 2i0z_A NAD(FAD)-utilizing dehy 94.1 0.065 2.2E-06 41.1 4.9 43 3-45 148-191 (447)
47 2xdo_A TETX2 protein; tetracyc 94.1 0.055 1.9E-06 40.6 4.3 41 4-44 141-181 (398)
48 1d5t_A Guanine nucleotide diss 94.0 0.028 9.5E-07 43.1 2.6 41 4-45 249-290 (433)
49 2oln_A NIKD protein; flavoprot 93.9 0.071 2.4E-06 39.7 4.6 41 3-44 167-207 (397)
50 3rp8_A Flavoprotein monooxygen 93.8 0.067 2.3E-06 40.1 4.4 40 4-43 140-179 (407)
51 3lzw_A Ferredoxin--NADP reduct 93.8 0.079 2.7E-06 38.0 4.6 40 3-43 81-121 (332)
52 2x3n_A Probable FAD-dependent 93.7 0.069 2.4E-06 39.9 4.2 49 3-51 122-173 (399)
53 2gqf_A Hypothetical protein HI 93.7 0.092 3.2E-06 39.9 4.9 41 3-44 123-167 (401)
54 3s5w_A L-ornithine 5-monooxyge 93.5 0.089 3.1E-06 40.1 4.7 40 3-42 330-374 (463)
55 2v3a_A Rubredoxin reductase; a 93.2 0.14 4.7E-06 38.3 5.1 40 3-42 201-240 (384)
56 3o0h_A Glutathione reductase; 93.1 0.14 4.7E-06 39.6 5.2 40 3-42 246-285 (484)
57 2yqu_A 2-oxoglutarate dehydrog 92.8 0.16 5.4E-06 38.9 5.1 40 3-42 222-261 (455)
58 4ap3_A Steroid monooxygenase; 92.7 0.11 3.9E-06 41.2 4.2 39 5-43 117-157 (549)
59 3axb_A Putative oxidoreductase 92.7 0.27 9.2E-06 37.2 6.2 47 3-51 195-259 (448)
60 3gwf_A Cyclohexanone monooxyge 92.7 0.11 3.7E-06 41.2 4.1 39 5-43 105-145 (540)
61 3hdq_A UDP-galactopyranose mut 92.6 0.21 7.3E-06 38.2 5.6 39 32-81 250-288 (397)
62 1xdi_A RV3303C-LPDA; reductase 92.4 0.18 6.2E-06 39.1 5.0 40 3-42 237-276 (499)
63 3ab1_A Ferredoxin--NADP reduct 92.3 0.18 6.1E-06 37.0 4.7 41 3-43 88-129 (360)
64 3iwa_A FAD-dependent pyridine 92.2 0.2 6.8E-06 38.5 5.0 40 3-42 216-255 (472)
65 3f8d_A Thioredoxin reductase ( 91.9 0.17 5.7E-06 36.0 4.0 40 3-43 84-123 (323)
66 3oc4_A Oxidoreductase, pyridin 91.9 0.25 8.7E-06 37.7 5.3 39 3-42 203-241 (452)
67 1w4x_A Phenylacetone monooxyge 91.8 0.17 5.7E-06 39.9 4.2 40 4-43 111-152 (542)
68 2r9z_A Glutathione amide reduc 91.6 0.27 9.2E-06 37.8 5.1 40 3-42 221-261 (463)
69 2gag_B Heterotetrameric sarcos 91.6 0.23 8E-06 36.7 4.7 42 3-45 188-230 (405)
70 2xve_A Flavin-containing monoo 91.5 0.17 5.9E-06 39.0 4.0 38 6-43 120-164 (464)
71 3fbs_A Oxidoreductase; structu 91.5 0.27 9.3E-06 34.5 4.8 39 4-43 72-110 (297)
72 3ef6_A Toluene 1,2-dioxygenase 91.5 0.24 8.1E-06 37.5 4.6 40 3-42 199-238 (410)
73 1fl2_A Alkyl hydroperoxide red 91.4 0.25 8.6E-06 35.2 4.6 40 3-42 70-112 (310)
74 3lxd_A FAD-dependent pyridine 91.4 0.32 1.1E-05 36.6 5.3 40 3-42 208-248 (415)
75 3klj_A NAD(FAD)-dependent dehy 91.3 0.25 8.7E-06 37.2 4.6 38 3-42 76-113 (385)
76 1mo9_A ORF3; nucleotide bindin 91.3 0.27 9.1E-06 38.5 4.8 40 3-42 269-313 (523)
77 3nlc_A Uncharacterized protein 91.0 0.3 1E-05 39.0 4.9 42 3-44 234-276 (549)
78 1m6i_A Programmed cell death p 91.0 0.35 1.2E-05 37.6 5.3 40 3-42 240-279 (493)
79 2q0l_A TRXR, thioredoxin reduc 90.9 0.32 1.1E-05 34.7 4.6 39 3-42 73-111 (311)
80 2bcg_G Secretory pathway GDP d 90.7 0.16 5.6E-06 38.9 3.1 40 4-44 257-299 (453)
81 3uox_A Otemo; baeyer-villiger 90.7 0.19 6.5E-06 39.8 3.5 38 5-42 105-144 (545)
82 3fg2_P Putative rubredoxin red 90.6 0.44 1.5E-05 35.8 5.3 40 3-42 198-238 (404)
83 3p1w_A Rabgdi protein; GDI RAB 90.4 0.29 9.8E-06 38.5 4.3 38 4-41 271-310 (475)
84 1ges_A Glutathione reductase; 90.2 0.42 1.5E-05 36.5 5.1 39 3-41 222-261 (450)
85 3s5w_A L-ornithine 5-monooxyge 90.1 0.19 6.5E-06 38.2 3.0 39 4-42 142-189 (463)
86 1fec_A Trypanothione reductase 89.8 0.49 1.7E-05 36.7 5.1 40 3-42 245-285 (490)
87 4dna_A Probable glutathione re 89.1 0.54 1.9E-05 36.0 4.9 39 3-42 225-265 (463)
88 2wpf_A Trypanothione reductase 89.0 0.56 1.9E-05 36.5 4.9 40 3-42 249-289 (495)
89 2hqm_A GR, grase, glutathione 88.8 0.59 2E-05 36.0 4.9 40 3-42 240-282 (479)
90 1ojt_A Surface protein; redox- 88.7 0.54 1.8E-05 36.2 4.7 40 3-42 240-283 (482)
91 2cul_A Glucose-inhibited divis 88.7 0.77 2.6E-05 31.8 5.1 40 3-43 83-123 (232)
92 3cgv_A Geranylgeranyl reductas 88.6 0.48 1.6E-05 34.8 4.1 41 3-43 116-160 (397)
93 3itj_A Thioredoxin reductase 1 88.5 0.57 2E-05 33.5 4.5 40 3-43 98-140 (338)
94 2eq6_A Pyruvate dehydrogenase 88.2 0.62 2.1E-05 35.7 4.7 40 3-42 224-268 (464)
95 1q1r_A Putidaredoxin reductase 88.2 0.88 3E-05 34.6 5.5 40 3-42 205-247 (431)
96 1onf_A GR, grase, glutathione 88.1 0.74 2.5E-05 35.7 5.1 40 3-42 231-272 (500)
97 3nix_A Flavoprotein/dehydrogen 88.0 0.66 2.3E-05 34.5 4.7 48 3-50 120-172 (421)
98 1vdc_A NTR, NADPH dependent th 87.9 0.42 1.4E-05 34.3 3.4 39 3-43 84-122 (333)
99 2qae_A Lipoamide, dihydrolipoy 87.8 0.69 2.4E-05 35.4 4.7 40 3-42 230-273 (468)
100 3lad_A Dihydrolipoamide dehydr 87.7 0.8 2.7E-05 35.1 5.0 40 3-42 235-277 (476)
101 1pj5_A N,N-dimethylglycine oxi 87.0 2.1 7.1E-05 35.4 7.4 41 4-45 166-207 (830)
102 3ntd_A FAD-dependent pyridine 86.8 1 3.6E-05 35.1 5.3 40 3-42 206-264 (565)
103 1zk7_A HGII, reductase, mercur 86.7 1 3.4E-05 34.5 5.1 39 3-42 230-268 (467)
104 2qa2_A CABE, polyketide oxygen 86.6 0.73 2.5E-05 35.9 4.3 48 3-50 121-172 (499)
105 3vrd_B FCCB subunit, flavocyto 86.6 0.53 1.8E-05 35.0 3.4 40 3-42 216-255 (401)
106 2qa1_A PGAE, polyketide oxygen 86.6 0.77 2.6E-05 35.8 4.4 48 3-50 120-171 (500)
107 3c4n_A Uncharacterized protein 86.5 0.25 8.5E-06 37.2 1.5 41 3-44 186-235 (405)
108 1trb_A Thioredoxin reductase; 86.5 0.69 2.4E-05 32.9 3.8 38 3-42 76-113 (320)
109 1hyu_A AHPF, alkyl hydroperoxi 86.3 0.86 2.9E-05 35.7 4.6 41 3-43 281-324 (521)
110 1zmd_A Dihydrolipoyl dehydroge 86.3 0.92 3.2E-05 34.7 4.7 40 3-42 234-279 (474)
111 1k0i_A P-hydroxybenzoate hydro 86.2 0.77 2.6E-05 33.9 4.1 43 3-45 117-163 (394)
112 3ic9_A Dihydrolipoamide dehydr 86.2 1 3.4E-05 34.9 4.9 39 4-42 229-271 (492)
113 3alj_A 2-methyl-3-hydroxypyrid 86.1 0.86 3E-05 33.6 4.3 45 3-50 121-166 (379)
114 3d1c_A Flavin-containing putat 85.8 1 3.6E-05 32.7 4.6 40 3-42 229-269 (369)
115 3ntd_A FAD-dependent pyridine 85.8 1 3.5E-05 35.2 4.8 40 3-42 72-114 (565)
116 2a8x_A Dihydrolipoyl dehydroge 85.4 1.2 3.9E-05 34.1 4.8 40 3-42 226-268 (464)
117 3fmw_A Oxygenase; mithramycin, 85.4 0.61 2.1E-05 37.1 3.3 48 3-50 162-213 (570)
118 3itj_A Thioredoxin reductase 1 85.3 1.2 4E-05 31.8 4.6 42 3-44 223-270 (338)
119 2cdu_A NADPH oxidase; flavoenz 85.2 1.4 4.7E-05 33.5 5.1 39 3-42 205-244 (452)
120 1ebd_A E3BD, dihydrolipoamide 85.1 0.93 3.2E-05 34.5 4.2 40 3-42 225-267 (455)
121 3ihg_A RDME; flavoenzyme, anth 85.1 0.77 2.6E-05 35.7 3.7 48 3-50 134-189 (535)
122 2a87_A TRXR, TR, thioredoxin r 85.0 0.78 2.7E-05 33.2 3.5 38 3-42 85-123 (335)
123 2qcu_A Aerobic glycerol-3-phos 85.0 1.1 3.9E-05 34.7 4.6 42 4-45 164-210 (501)
124 3f8d_A Thioredoxin reductase ( 85.0 1.4 4.9E-05 31.0 4.9 40 3-42 204-248 (323)
125 3l8k_A Dihydrolipoyl dehydroge 84.7 0.95 3.2E-05 34.7 4.1 39 4-42 226-269 (466)
126 3cgb_A Pyridine nucleotide-dis 84.7 1.4 4.6E-05 34.0 4.9 40 3-42 107-149 (480)
127 1v59_A Dihydrolipoamide dehydr 84.6 1 3.5E-05 34.4 4.2 40 3-42 238-284 (478)
128 4hb9_A Similarities with proba 84.3 1.4 4.9E-05 32.2 4.7 40 5-44 125-165 (412)
129 3c96_A Flavin-containing monoo 84.3 0.63 2.1E-05 34.8 2.8 40 4-44 124-168 (410)
130 2bc0_A NADH oxidase; flavoprot 83.8 1.1 3.7E-05 34.6 4.1 40 3-42 106-146 (490)
131 3urh_A Dihydrolipoyl dehydroge 83.3 1.2 4.3E-05 34.2 4.2 40 3-42 253-297 (491)
132 2gqw_A Ferredoxin reductase; f 83.3 1.7 5.7E-05 32.7 4.8 36 3-42 201-236 (408)
133 3h8l_A NADH oxidase; membrane 83.3 1 3.4E-05 33.7 3.6 36 3-42 232-267 (409)
134 3lzw_A Ferredoxin--NADP reduct 83.2 1.1 3.7E-05 31.9 3.6 41 3-43 203-248 (332)
135 2e4g_A Tryptophan halogenase; 83.2 1.8 6.1E-05 34.0 5.1 42 3-45 209-252 (550)
136 3oc4_A Oxidoreductase, pyridin 83.2 1.9 6.4E-05 32.8 5.1 40 3-42 72-112 (452)
137 1trb_A Thioredoxin reductase; 83.1 2.4 8.3E-05 30.0 5.5 42 3-44 198-246 (320)
138 3ab1_A Ferredoxin--NADP reduct 83.0 2.4 8.3E-05 30.8 5.5 39 4-42 217-260 (360)
139 3e1t_A Halogenase; flavoprotei 83.0 1.6 5.5E-05 33.8 4.8 42 3-44 125-171 (512)
140 4b1b_A TRXR, thioredoxin reduc 82.8 1.8 6.2E-05 34.3 5.0 39 3-41 277-315 (542)
141 1y56_A Hypothetical protein PH 82.8 1.4 4.7E-05 34.2 4.3 40 3-42 271-310 (493)
142 3iwa_A FAD-dependent pyridine 82.6 1.7 5.8E-05 33.2 4.7 40 3-42 80-122 (472)
143 1n4w_A CHOD, cholesterol oxida 82.4 1.7 5.9E-05 33.7 4.7 49 3-51 236-294 (504)
144 2bry_A NEDD9 interacting prote 82.4 1.5 5.3E-05 34.0 4.4 43 3-45 180-230 (497)
145 1q1r_A Putidaredoxin reductase 82.4 1.8 6.2E-05 32.8 4.8 38 3-42 74-111 (431)
146 3ef6_A Toluene 1,2-dioxygenase 82.4 1.6 5.6E-05 32.7 4.5 38 3-42 71-108 (410)
147 1coy_A Cholesterol oxidase; ox 82.2 2 6.7E-05 33.5 5.0 49 3-51 241-299 (507)
148 3atr_A Conserved archaeal prot 82.2 1.9 6.5E-05 32.7 4.8 43 3-45 114-162 (453)
149 2weu_A Tryptophan 5-halogenase 81.8 2.2 7.6E-05 32.8 5.1 42 3-45 187-230 (511)
150 3cty_A Thioredoxin reductase; 81.8 2.1 7E-05 30.5 4.7 39 3-43 86-124 (319)
151 1qo8_A Flavocytochrome C3 fuma 81.8 1.6 5.4E-05 34.4 4.3 43 3-45 264-312 (566)
152 1y0p_A Fumarate reductase flav 81.7 2.2 7.5E-05 33.6 5.1 41 3-43 269-315 (571)
153 1dxl_A Dihydrolipoamide dehydr 81.7 1.2 4.3E-05 33.8 3.6 40 3-42 232-276 (470)
154 3r9u_A Thioredoxin reductase; 81.6 2.5 8.4E-05 29.7 5.0 42 3-44 197-243 (315)
155 2gqw_A Ferredoxin reductase; f 81.3 1.4 4.6E-05 33.2 3.7 38 3-42 73-110 (408)
156 3t37_A Probable dehydrogenase; 81.3 2.7 9.4E-05 32.3 5.5 52 2-53 224-279 (526)
157 1xhc_A NADH oxidase /nitrite r 81.2 1.2 4.2E-05 33.0 3.4 37 3-42 74-110 (367)
158 1m6i_A Programmed cell death p 81.0 1.5 5E-05 34.0 3.8 37 3-41 104-140 (493)
159 1d4d_A Flavocytochrome C fumar 80.4 2.6 9E-05 33.3 5.2 41 3-43 269-315 (572)
160 2rgh_A Alpha-glycerophosphate 80.3 2.1 7.3E-05 33.9 4.6 41 4-44 203-249 (571)
161 2q7v_A Thioredoxin reductase; 80.2 1.5 5.1E-05 31.4 3.4 39 4-43 80-121 (325)
162 3ics_A Coenzyme A-disulfide re 80.2 2.5 8.4E-05 33.3 4.9 40 3-42 107-149 (588)
163 3ics_A Coenzyme A-disulfide re 79.2 2.3 8E-05 33.4 4.5 38 3-42 242-279 (588)
164 2zbw_A Thioredoxin reductase; 79.2 3.2 0.00011 29.6 5.0 41 3-43 205-250 (335)
165 2q7v_A Thioredoxin reductase; 79.1 3.7 0.00013 29.2 5.3 40 3-42 202-246 (325)
166 2q0l_A TRXR, thioredoxin reduc 78.1 4.2 0.00014 28.7 5.3 41 3-43 193-239 (311)
167 2r0c_A REBC; flavin adenine di 78.1 1.8 6.2E-05 34.0 3.6 45 6-50 152-202 (549)
168 2aqj_A Tryptophan halogenase, 77.9 3.8 0.00013 31.9 5.3 42 3-45 179-222 (538)
169 1lvl_A Dihydrolipoamide dehydr 77.8 2.6 8.8E-05 32.2 4.3 38 3-42 226-265 (458)
170 3kd9_A Coenzyme A disulfide re 77.8 2.3 7.7E-05 32.3 3.9 38 3-42 73-111 (449)
171 3dk9_A Grase, GR, glutathione 77.3 3.5 0.00012 31.5 5.0 40 3-42 242-290 (478)
172 3cgb_A Pyridine nucleotide-dis 77.1 3.9 0.00013 31.3 5.2 40 3-43 241-280 (480)
173 4at0_A 3-ketosteroid-delta4-5a 76.8 3.2 0.00011 32.2 4.6 43 3-45 216-264 (510)
174 3i3l_A Alkylhalidase CMLS; fla 76.6 2.9 9.9E-05 33.4 4.4 42 3-44 142-187 (591)
175 3dgh_A TRXR-1, thioredoxin red 76.6 2.6 9E-05 32.3 4.0 40 3-42 241-286 (483)
176 4b63_A L-ornithine N5 monooxyg 75.7 2.4 8.1E-05 33.0 3.6 39 4-42 160-211 (501)
177 1nhp_A NADH peroxidase; oxidor 75.7 4 0.00014 30.9 4.8 40 3-42 70-112 (447)
178 3da1_A Glycerol-3-phosphate de 75.6 2.4 8.1E-05 33.6 3.6 42 3-44 184-231 (561)
179 3hyw_A Sulfide-quinone reducta 75.6 3.8 0.00013 30.9 4.7 38 3-43 70-107 (430)
180 3cty_A Thioredoxin reductase; 75.4 5.6 0.00019 28.2 5.3 41 3-43 204-250 (319)
181 3lxd_A FAD-dependent pyridine 75.4 3.1 0.0001 31.1 4.0 38 3-42 79-116 (415)
182 2jbv_A Choline oxidase; alcoho 74.9 5.2 0.00018 31.5 5.4 51 2-52 222-280 (546)
183 1nhp_A NADH peroxidase; oxidor 74.6 3.6 0.00012 31.1 4.3 39 3-42 205-243 (447)
184 2cdu_A NADPH oxidase; flavoenz 74.5 3.8 0.00013 31.1 4.4 40 3-42 72-114 (452)
185 1kdg_A CDH, cellobiose dehydro 73.8 6.6 0.00023 30.6 5.8 50 2-51 209-267 (546)
186 3r9u_A Thioredoxin reductase; 73.5 2.6 9E-05 29.6 3.1 37 3-43 76-116 (315)
187 4fk1_A Putative thioredoxin re 73.4 5.2 0.00018 28.4 4.7 33 10-42 81-114 (304)
188 3pl8_A Pyranose 2-oxidase; sub 71.6 6.7 0.00023 31.5 5.4 49 3-51 274-330 (623)
189 2pyx_A Tryptophan halogenase; 71.5 5.1 0.00018 31.1 4.6 42 3-45 190-233 (526)
190 4eqs_A Coenzyme A disulfide re 71.0 4.8 0.00017 30.6 4.3 41 3-43 71-114 (437)
191 2zxi_A TRNA uridine 5-carboxym 70.5 5.7 0.00019 32.4 4.7 41 3-44 138-179 (637)
192 3fg2_P Putative rubredoxin red 70.2 6.4 0.00022 29.3 4.7 37 3-42 71-107 (404)
193 1rp0_A ARA6, thiazole biosynth 69.8 5.8 0.0002 28.1 4.3 41 3-43 134-189 (284)
194 1vdc_A NTR, NADPH dependent th 69.5 10 0.00035 26.9 5.6 41 3-43 209-257 (333)
195 2bc0_A NADH oxidase; flavoprot 68.8 6 0.0002 30.4 4.4 38 3-42 250-288 (490)
196 1fl2_A Alkyl hydroperoxide red 68.7 11 0.00036 26.5 5.5 40 3-42 194-239 (310)
197 3gwf_A Cyclohexanone monooxyge 68.5 4.2 0.00015 32.0 3.5 37 3-43 344-382 (540)
198 3fbs_A Oxidoreductase; structu 67.5 5.4 0.00019 27.6 3.6 36 3-42 188-223 (297)
199 1kf6_A Fumarate reductase flav 66.5 8.1 0.00028 30.8 4.8 44 3-46 149-198 (602)
200 2a87_A TRXR, TR, thioredoxin r 66.5 6.7 0.00023 28.1 4.1 41 3-43 205-250 (335)
201 3ces_A MNMG, tRNA uridine 5-ca 65.7 6.1 0.00021 32.3 4.0 41 3-44 139-180 (651)
202 3k30_A Histamine dehydrogenase 64.2 3.8 0.00013 33.1 2.6 40 3-42 581-621 (690)
203 3kd9_A Coenzyme A disulfide re 64.0 5 0.00017 30.3 3.1 38 4-42 204-241 (449)
204 1ju2_A HydroxynitrIle lyase; f 63.9 12 0.00042 29.2 5.4 51 2-52 207-268 (536)
205 3cp8_A TRNA uridine 5-carboxym 63.5 7.6 0.00026 31.6 4.2 41 3-44 132-173 (641)
206 3uox_A Otemo; baeyer-villiger 63.1 7.1 0.00024 30.7 3.9 38 3-45 352-391 (545)
207 3dgz_A Thioredoxin reductase 2 62.8 8.6 0.00029 29.4 4.2 40 3-42 239-284 (488)
208 3sx6_A Sulfide-quinone reducta 61.6 10 0.00036 28.5 4.5 37 4-43 74-110 (437)
209 3qvp_A Glucose oxidase; oxidor 61.2 11 0.00038 30.1 4.7 50 2-51 240-299 (583)
210 3h28_A Sulfide-quinone reducta 61.0 5.2 0.00018 30.1 2.7 37 3-41 214-252 (430)
211 3q9t_A Choline dehydrogenase a 60.9 14 0.00047 29.5 5.2 50 2-51 219-276 (577)
212 1vg0_A RAB proteins geranylger 60.3 14 0.00046 30.2 5.1 36 4-39 393-431 (650)
213 1y56_A Hypothetical protein PH 59.8 6.3 0.00022 30.4 3.0 41 3-43 174-217 (493)
214 1ps9_A 2,4-dienoyl-COA reducta 59.3 13 0.00046 29.7 4.9 39 3-43 587-626 (671)
215 3hyw_A Sulfide-quinone reducta 59.1 3.8 0.00013 31.0 1.6 38 3-42 214-253 (430)
216 3h8l_A NADH oxidase; membrane 57.8 15 0.0005 27.2 4.7 38 4-42 71-110 (409)
217 2gmh_A Electron transfer flavo 57.7 17 0.0006 28.7 5.3 42 3-44 158-216 (584)
218 4ap3_A Steroid monooxygenase; 57.7 10 0.00035 29.8 3.9 37 3-44 357-395 (549)
219 3h28_A Sulfide-quinone reducta 57.4 15 0.0005 27.5 4.6 37 3-42 70-106 (430)
220 3fim_B ARYL-alcohol oxidase; A 57.0 17 0.00058 28.8 5.1 51 2-52 221-283 (566)
221 1gpe_A Protein (glucose oxidas 55.9 11 0.00039 29.8 3.9 51 2-52 244-304 (587)
222 4g6h_A Rotenone-insensitive NA 55.4 10 0.00034 29.5 3.5 47 3-49 286-339 (502)
223 2dkh_A 3-hydroxybenzoate hydro 55.0 9.2 0.00031 30.6 3.3 49 3-51 157-218 (639)
224 1xhc_A NADH oxidase /nitrite r 54.5 9.2 0.00031 28.2 3.0 35 3-42 197-231 (367)
225 1ebd_A E3BD, dihydrolipoamide 54.1 15 0.00053 27.6 4.3 37 3-42 105-142 (455)
226 1chu_A Protein (L-aspartate ox 54.0 21 0.00072 27.9 5.2 43 3-45 153-208 (540)
227 2e5v_A L-aspartate oxidase; ar 53.9 12 0.00039 28.8 3.6 41 3-45 133-176 (472)
228 1dxl_A Dihydrolipoamide dehydr 53.4 15 0.0005 27.8 4.1 37 3-42 110-148 (470)
229 2bs2_A Quinol-fumarate reducta 53.2 23 0.00077 28.7 5.3 43 3-45 172-220 (660)
230 4eqs_A Coenzyme A disulfide re 51.2 16 0.00053 27.7 3.9 36 3-42 202-237 (437)
231 4a5l_A Thioredoxin reductase; 50.9 17 0.00057 25.4 3.8 33 10-42 86-118 (314)
232 2v3a_A Rubredoxin reductase; a 49.2 15 0.00052 26.9 3.5 37 3-42 74-110 (384)
233 3sx6_A Sulfide-quinone reducta 49.2 16 0.00054 27.4 3.7 38 3-42 222-266 (437)
234 1v59_A Dihydrolipoamide dehydr 49.1 13 0.00044 28.2 3.2 36 4-42 111-154 (478)
235 2h88_A Succinate dehydrogenase 49.1 22 0.00075 28.6 4.6 44 3-46 169-218 (621)
236 3l8k_A Dihydrolipoyl dehydroge 48.2 24 0.00083 26.7 4.6 36 4-42 104-141 (466)
237 2wdq_A Succinate dehydrogenase 47.5 25 0.00085 27.9 4.7 43 3-45 157-206 (588)
238 3vrd_B FCCB subunit, flavocyto 47.0 25 0.00085 25.8 4.4 37 4-43 70-106 (401)
239 2a8x_A Dihydrolipoyl dehydroge 46.1 15 0.00053 27.7 3.2 37 3-42 105-143 (464)
240 1hyu_A AHPF, alkyl hydroperoxi 45.1 31 0.001 26.7 4.8 40 3-42 405-450 (521)
241 1zk7_A HGII, reductase, mercur 41.5 35 0.0012 25.7 4.5 36 4-42 110-147 (467)
242 2gv8_A Monooxygenase; FMO, FAD 39.7 30 0.001 25.9 3.9 35 6-42 254-289 (447)
243 2e1m_A L-glutamate oxidase; L- 37.6 22 0.00077 26.7 2.8 22 4-25 332-353 (376)
244 2qae_A Lipoamide, dihydrolipoy 36.8 28 0.00095 26.3 3.3 36 4-42 108-145 (468)
245 3qfa_A Thioredoxin reductase 1 36.7 46 0.0016 25.7 4.6 40 3-42 264-312 (519)
246 1xdi_A RV3303C-LPDA; reductase 35.2 25 0.00087 26.9 2.9 38 4-42 110-153 (499)
247 1jnr_A Adenylylsulfate reducta 33.6 29 0.00099 27.8 3.0 43 3-45 166-218 (643)
248 1ojt_A Surface protein; redox- 32.5 25 0.00087 26.7 2.5 36 4-42 110-157 (482)
249 1o94_A Tmadh, trimethylamine d 31.9 31 0.0011 28.1 3.0 38 3-42 585-643 (729)
250 1w4x_A Phenylacetone monooxyge 31.5 43 0.0015 26.0 3.6 37 3-44 352-390 (542)
251 4g6h_A Rotenone-insensitive NA 31.2 48 0.0017 25.6 3.9 33 10-42 116-166 (502)
252 3pfn_A NAD kinase; structural 31.2 7.6 0.00026 29.5 -0.7 32 22-53 233-266 (365)
253 3oz2_A Digeranylgeranylglycero 29.3 77 0.0026 22.4 4.5 41 3-43 116-160 (397)
254 2x8g_A Thioredoxin glutathione 29.0 85 0.0029 24.5 5.0 40 3-42 340-392 (598)
255 3ghy_A Ketopantoate reductase 28.2 34 0.0012 24.8 2.4 22 32-53 69-90 (335)
256 2gag_A Heterotetrameric sarcos 27.7 58 0.002 27.5 4.0 40 3-42 330-380 (965)
257 3g17_A Similar to 2-dehydropan 27.1 23 0.00079 25.2 1.3 22 32-53 61-82 (294)
258 4huj_A Uncharacterized protein 25.9 36 0.0012 23.0 2.1 21 33-53 81-101 (220)
259 1yqg_A Pyrroline-5-carboxylate 25.0 53 0.0018 22.5 2.9 20 33-52 57-76 (263)
260 3db7_A Putative calcium-regula 24.9 62 0.0021 20.4 2.9 27 9-35 91-117 (127)
261 3ego_A Probable 2-dehydropanto 24.8 24 0.00084 25.3 1.1 20 33-52 67-86 (307)
262 4dsd_A Putative periplasmic pr 24.1 76 0.0026 20.0 3.3 22 9-30 93-114 (129)
263 1cjc_A Protein (adrenodoxin re 22.9 1.1E+02 0.0037 23.2 4.5 40 3-42 271-330 (460)
264 2raf_A Putative dinucleotide-b 22.8 54 0.0019 22.0 2.5 20 33-52 57-76 (209)
265 3elg_A Uncharacterized peripla 22.7 85 0.0029 19.7 3.3 21 9-29 92-112 (128)
266 2f1k_A Prephenate dehydrogenas 22.1 55 0.0019 22.6 2.5 19 32-50 56-74 (279)
267 3jsk_A Cypbp37 protein; octame 21.9 41 0.0014 25.1 1.8 17 3-19 175-191 (344)
268 1vct_A Hypothetical protein PH 21.5 1.7E+02 0.0058 19.6 4.9 41 8-49 148-189 (205)
269 2g5c_A Prephenate dehydrogenas 20.7 62 0.0021 22.5 2.5 18 33-50 62-79 (281)
270 2d59_A Hypothetical protein PH 20.3 69 0.0024 20.3 2.5 19 33-51 77-95 (144)
271 2r31_A ATP12 ATPase; chaperone 20.1 73 0.0025 22.5 2.8 37 15-51 18-54 (239)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.76 E-value=2.2e-18 Score=129.01 Aligned_cols=108 Identities=15% Similarity=0.210 Sum_probs=91.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCC---CHHHHHHhhcCCccceEEEEEeecC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSG---LPQIARQMKRLELSSIWALLAAFED 79 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~---~~~~a~~l~~i~~~p~~~v~l~~~~ 79 (119)
.++|+++++|++|++++++|+|.+++|....||.||+|+|++++++||.... .+...+.|++++|.|+++|+|.|++
T Consensus 123 g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~ 202 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEA 202 (342)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSS
T ss_pred CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECC
Confidence 3689999999999999999999987775456999999999999999997532 0356788999999999999999997
Q ss_pred C--CCCCCCCceeeEEECCCCcEEEEEecCCCCCCCC
Q 041088 80 P--LPLGSASTFEGAFVKGVDSVSWMANNSAKLLNSQ 114 (119)
Q Consensus 80 ~--~~~p~~~~~~~~~~~~~~~~~wv~~~s~Kp~~~~ 114 (119)
+ ...| +.|+.+.+++.++|++++++||+|..
T Consensus 203 ~~~~~~~----~~g~~~~~~~~~~~~~~~~~k~~r~~ 235 (342)
T 3qj4_A 203 GTKIDVP----WAGQYITSNPCIRFVSIDNKKRNIES 235 (342)
T ss_dssp CC--CCS----CSEEECSSCSSEEEEEEHHHHTTCCC
T ss_pred CCccCCc----eeeEEccCCcceEEEEccccCCCCCC
Confidence 6 3466 88988877657999999999999763
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.55 E-value=1.2e-13 Score=102.21 Aligned_cols=104 Identities=26% Similarity=0.497 Sum_probs=91.2
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCcccc-ccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRG-QFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPLP 82 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~-~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~~ 82 (119)
++|+++++|++|+.++++|.|...+|... .+|.||+|+|++++.+++.. . +.+...+..++|.+++++++.|+++.+
T Consensus 120 ~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1yvv_A 120 MPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAA-A-PKLASVVAGVKMDPTWAVALAFETPLQ 197 (336)
T ss_dssp CCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTT-C-HHHHHHHTTCCEEEEEEEEEEESSCCS
T ss_pred CcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhcc-C-HHHHHHHhhcCccceeEEEEEecCCCC
Confidence 57999999999999999999998777443 48999999999999999876 3 677788899999999999999999988
Q ss_pred CCCCCceeeEEECCCCcEEEEEecCCCCCCCC
Q 041088 83 LGSASTFEGAFVKGVDSVSWMANNSAKLLNSQ 114 (119)
Q Consensus 83 ~p~~~~~~~~~~~~~~~~~wv~~~s~Kp~~~~ 114 (119)
.+ +.+.++.++ ++.|++++++||++..
T Consensus 198 ~~----~~~~~~~~~-~~~~l~~~~~~p~~~~ 224 (336)
T 1yvv_A 198 TP----MQGCFVQDS-PLDWLARNRSKPERDD 224 (336)
T ss_dssp CC----CCEEEECSS-SEEEEEEGGGSTTCCC
T ss_pred CC----CCeEEeCCC-ceeEEEecCcCCCCCC
Confidence 77 778887776 8999999999998764
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.28 E-value=1e-11 Score=96.08 Aligned_cols=105 Identities=16% Similarity=0.142 Sum_probs=83.3
Q ss_pred eeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCCC
Q 041088 4 FSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPLP 82 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~~ 82 (119)
++|+++++|++|++.+++ |.|..+++. ..||+||+|+|++++.+||+... +.+.+.+.+++|.++.++++.|+++..
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~~v~~~~~~-~~ad~vv~a~p~~~~~~ll~~~~-~~~~~~l~~~~~~~~~~v~l~~~~~~~ 326 (477)
T 3nks_A 249 VSVLRGQPVCGLSLQAEGRWKVSLRDSS-LEADHVISAIPASVLSELLPAEA-APLARALSAITAVSVAVVNLQYQGAHL 326 (477)
T ss_dssp CEEECSCCCCEEEECGGGCEEEECSSCE-EEESEEEECSCHHHHHHHSCGGG-HHHHHHHHTCCEEEEEEEEEEETTCCC
T ss_pred CEEEeCCEEEEEEEcCCceEEEEECCeE-EEcCEEEECCCHHHHHHhccccC-HHHHHHHhcCCCCcEEEEEEEECCCCC
Confidence 589999999999998877 999876553 46999999999999999998866 788889999999999999999998764
Q ss_pred CCCCCceeeEEECC---CCcEEEEEecCCCCCCC
Q 041088 83 LGSASTFEGAFVKG---VDSVSWMANNSAKLLNS 113 (119)
Q Consensus 83 ~p~~~~~~~~~~~~---~~~~~wv~~~s~Kp~~~ 113 (119)
.. ..| |..+.. ...++|++..+..|++.
T Consensus 327 ~~--~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~ 357 (477)
T 3nks_A 327 PV--QGF-GHLVPSSEDPGVLGIVYDSVAFPEQD 357 (477)
T ss_dssp SS--CSS-EEECCTTTCSSEEEEECHHHHCGGGS
T ss_pred CC--CCc-eEEccCCCCCCceEEEEeccccCCCC
Confidence 21 014 555542 23789988766666653
No 4
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.06 E-value=5.8e-10 Score=86.85 Aligned_cols=102 Identities=8% Similarity=-0.042 Sum_probs=81.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
++|+++++|++|+..+++|.|...+|....+|+||+|+|...+.+|+ +... +...+.++.+.|.++..++|.|+++.
T Consensus 271 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 271 LGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred eEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhcCCCceeEEEEEECCcc
Confidence 67999999999999888999988777545699999999999999885 3334 55677888899999999999999976
Q ss_pred CCCCCCceeeEEECCCCcEEEEEecCCCCC
Q 041088 82 PLGSASTFEGAFVKGVDSVSWMANNSAKLL 111 (119)
Q Consensus 82 ~~p~~~~~~~~~~~~~~~~~wv~~~s~Kp~ 111 (119)
+.. |.|....+. ++.|++.++..|+
T Consensus 350 ~~~----~~g~~~~~~-~~~~~~~~~~~~~ 374 (495)
T 2vvm_A 350 MRS----WTGIAYPFN-KLCYAIGDGTTPA 374 (495)
T ss_dssp GGG----EEEEECSSC-SSCEEEEEEECTT
T ss_pred CCC----ceeEecCCC-CcEEEecCCCCCC
Confidence 545 766665554 7788887765553
No 5
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.04 E-value=5.9e-10 Score=86.29 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=66.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPLPL 83 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~~~ 83 (119)
.+|+++++|++|++.+++|.|.+.+| ...||+||+|+|++++.+|+.... + +.+..++|.++.++++.|+++...
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~---~-~~~~~~~~~~~~~v~l~~~~~~~~ 323 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAH---L-PELEQLTTHSTATVTMIFDQQQSL 323 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTSC---C-HHHHTCCEEEEEEEEEEEECCSSC
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcCccC---H-HHHhcCCCCeEEEEEEEECCcCCC
Confidence 48999999999999999999998777 456999999999999999997754 2 677899999999999999997643
Q ss_pred C
Q 041088 84 G 84 (119)
Q Consensus 84 p 84 (119)
+
T Consensus 324 ~ 324 (475)
T 3lov_A 324 P 324 (475)
T ss_dssp S
T ss_pred C
Confidence 3
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.04 E-value=9e-10 Score=84.48 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=66.8
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPLP 82 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~~ 82 (119)
.+|+++++|++|+.++++|.|.+.+|....||+||+|+|++++.+|+.... +.+.++.++|.++..+++.|+++.+
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~---~~~~~~~~~~~~~~~v~l~~~~~~~ 323 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP---AISHLKNMHSTSVANVALGFPEGSV 323 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTST---THHHHHTCEEEEEEEEEEEESSTTC
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCch---hhHHHhcCCCCceEEEEEEECchhc
Confidence 589999999999999999999987775557999999999999999987643 4578899999999999999999765
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.96 E-value=1.3e-08 Score=77.42 Aligned_cols=100 Identities=14% Similarity=0.071 Sum_probs=76.6
Q ss_pred eeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCHHHHHhhcCCCC----CHHHHHHhhcCCccceEEEEEeec
Q 041088 4 FSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGKCANRLLGSSG----LPQIARQMKRLELSSIWALLAAFE 78 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~----~~~~a~~l~~i~~~p~~~v~l~~~ 78 (119)
++|+++++|++|..++++|. +..+++ ...+|+||+|+|++.+.+||+... .+.+.+.+++++|.+..+++|+|+
T Consensus 211 ~~i~~~~~V~~i~~~~~~~~gv~~~g~-~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 289 (425)
T 3ka7_A 211 GKIHTGQEVSKILIENGKAAGIIADDR-IHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAAD 289 (425)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEES
T ss_pred CEEEECCceeEEEEECCEEEEEEECCE-EEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecC
Confidence 68999999999999998886 766644 446899999999999999997431 156778889999999999999999
Q ss_pred CCCCCCCCCceeeEEECCCC-cEEEEEecCCC
Q 041088 79 DPLPLGSASTFEGAFVKGVD-SVSWMANNSAK 109 (119)
Q Consensus 79 ~~~~~p~~~~~~~~~~~~~~-~~~wv~~~s~K 109 (119)
++.. . ..++.+..+. .+.++...|.+
T Consensus 290 ~~~~-~----~~~~~~~~~~~~~~~~~~~s~~ 316 (425)
T 3ka7_A 290 EPLV-G----HTGVLLTPYTRRINGVNEVTQA 316 (425)
T ss_dssp SCSS-C----SSSEEECCSSSSEEEEECGGGT
T ss_pred CCcc-C----cCEEEECCChhhcceEEeccCC
Confidence 8754 2 3355554432 56666666554
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.94 E-value=2.7e-09 Score=82.51 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=65.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEe---CCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSE---NVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDP 80 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~---~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~ 80 (119)
.+|+++++|++|...+++|.|.. .+|....||+||+|+|++++.+|++... +...+.+++++|.++..+++.|+++
T Consensus 250 ~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l~-~~~~~~l~~~~~~~~~~v~l~~~~~ 328 (478)
T 2ivd_A 250 DAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLD-DALAALVAGIAYAPIAVVHLGFDAG 328 (478)
T ss_dssp GGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTTC-HHHHHHHHTCCBCCEEEEEEEECTT
T ss_pred hhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhccC-HHHHHHHhcCCCCcEEEEEEEEccc
Confidence 37999999999999888899886 5554456999999999999999998766 6777888999999999999999987
Q ss_pred C
Q 041088 81 L 81 (119)
Q Consensus 81 ~ 81 (119)
.
T Consensus 329 ~ 329 (478)
T 2ivd_A 329 T 329 (478)
T ss_dssp S
T ss_pred c
Confidence 5
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.91 E-value=9e-09 Score=80.81 Aligned_cols=102 Identities=8% Similarity=0.039 Sum_probs=76.8
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
++|+++++|++|...+++|.|...+|....||+||+|+|+.++.+|+ +... +...+.+++++|.++..+++.|+++.
T Consensus 227 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (520)
T 1s3e_A 227 DRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLGSVIKCIVYYKEPF 305 (520)
T ss_dssp GGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBCCEEEEEEECSSCG
T ss_pred CcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCcceEEEEEEeCCCc
Confidence 46999999999999888999988777555699999999999999886 3334 45667889999999999999999986
Q ss_pred CCCCCCceeeEEE--CCCCcEEEEEecCC
Q 041088 82 PLGSASTFEGAFV--KGVDSVSWMANNSA 108 (119)
Q Consensus 82 ~~p~~~~~~~~~~--~~~~~~~wv~~~s~ 108 (119)
+.. ..+.|..+ ....++.++++.+.
T Consensus 306 w~~--~~~~g~~~~~~~~~~~~~~~d~~~ 332 (520)
T 1s3e_A 306 WRK--KDYCGTMIIDGEEAPVAYTLDDTK 332 (520)
T ss_dssp GGG--GTEEEEEEECSTTCSCSEEEECCC
T ss_pred ccC--CCCCceeeccCCCCceEEEeeCCC
Confidence 521 01555443 22226777665543
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.90 E-value=2.6e-09 Score=83.05 Aligned_cols=104 Identities=12% Similarity=-0.031 Sum_probs=77.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc---cccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK---LRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDP 80 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g---~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~ 80 (119)
.+|+++++|++|++.+++|.|...+| ....||+||+|+|+..+..|+.+.. +...+.+++++|.++..++|.|+++
T Consensus 252 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~-~~~~~~l~~~~~~~~~kv~l~~~~~ 330 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNLP-GDVLTALKAAKPSSSGKLGIEYSRR 330 (489)
T ss_dssp GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEECCC-HHHHHHHHTEECCCEEEEEEEESSC
T ss_pred CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCccCCC-HHHHHHHHhCCCccceEEEEEeCCC
Confidence 46999999999999999999876543 3457999999999999998876555 6677888999999999999999987
Q ss_pred CCCCCCCcee-eEEECCCCcEEEEEecCCCC
Q 041088 81 LPLGSASTFE-GAFVKGVDSVSWMANNSAKL 110 (119)
Q Consensus 81 ~~~p~~~~~~-~~~~~~~~~~~wv~~~s~Kp 110 (119)
.+... .... +....+. ++.++...+.+.
T Consensus 331 ~w~~~-~~~~g~~~~~~~-~~~~~~~~s~~~ 359 (489)
T 2jae_A 331 WWETE-DRIYGGASNTDK-DISQIMFPYDHY 359 (489)
T ss_dssp HHHHT-TCCCSCEEEESS-TTCEEECCSSST
T ss_pred CccCC-CCcccccccCCC-CceEEEeCCCCC
Confidence 53110 0022 2334444 666777666553
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.88 E-value=9.3e-09 Score=79.01 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=75.8
Q ss_pred eeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeecCC
Q 041088 4 FSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFEDP 80 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~ 80 (119)
.+|+++++|++|...+++ |.|..+++ ...+|+||+|+|+..+.+|+ +... +...+.+++++|.++..+++.|+++
T Consensus 227 ~~i~~~~~V~~i~~~~~~~v~v~~~~~-~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (453)
T 2yg5_A 227 DDVFLNAPVRTVKWNESGATVLADGDI-RVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQSLGLVIKVHAVYETP 304 (453)
T ss_dssp GGEECSCCEEEEEEETTEEEEEETTTE-EEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEEECCEEEEEEEESSC
T ss_pred CcEEcCCceEEEEEeCCceEEEEECCe-EEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCCCcceEEEEEEECCC
Confidence 479999999999999888 99887544 44689999999999998886 3334 4566788899999999999999988
Q ss_pred CCCCCCCceeeEEECCCCcEEEEEecC
Q 041088 81 LPLGSASTFEGAFVKGVDSVSWMANNS 107 (119)
Q Consensus 81 ~~~p~~~~~~~~~~~~~~~~~wv~~~s 107 (119)
.+.. ..+.+..+....++.|+++.+
T Consensus 305 ~w~~--~~~~g~~~~~~~~~~~~~~~~ 329 (453)
T 2yg5_A 305 FWRE--DGLSGTGFGASEVVQEVYDNT 329 (453)
T ss_dssp GGGG--GTEEEEEECTTSSSCEEEECC
T ss_pred CCCC--CCCCceeecCCCCeEEEEeCC
Confidence 6421 015555554433777877655
No 12
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.88 E-value=7.8e-09 Score=81.20 Aligned_cols=98 Identities=6% Similarity=-0.111 Sum_probs=75.3
Q ss_pred eEEcC--ceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCC----CCCHHHHHHhhcCCccceEEEEEeec
Q 041088 5 SIVRP--CWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGS----SGLPQIARQMKRLELSSIWALLAAFE 78 (119)
Q Consensus 5 ~i~~~--~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~----~~~~~~a~~l~~i~~~p~~~v~l~~~ 78 (119)
+|+++ ++|++|.+++++|.+ .+|....||+||+|+|++++.+|+.. .. ++..+.++.++|.++.+|+++|+
T Consensus 230 ~i~~~~~~~V~~I~~~~~~v~~--~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~-~~~~~~l~~l~y~s~~~v~l~~~ 306 (484)
T 4dsg_A 230 KLTFNSGFQAIAIDADAKTITF--SNGEVVSYDYLISTVPFDNLLRMTKGTGFKGY-DEWPAIADKMVYSSTNVIGIGVK 306 (484)
T ss_dssp GEEECGGGCEEEEETTTTEEEE--TTSCEEECSEEEECSCHHHHHHHEECSSCTTG-GGHHHHHHHCCEEEEEEEEEEEE
T ss_pred eEEECCCceeEEEEecCCEEEE--CCCCEEECCEEEECCCHHHHHHHhhccCCCCC-HHHHHHHhCCCcCceEEEEEEEc
Confidence 68999 569999998888865 44544569999999999999999975 44 67778899999999999999998
Q ss_pred CCCC---CCCCCceeeEEECCCC-cEEEEEecCCC
Q 041088 79 DPLP---LGSASTFEGAFVKGVD-SVSWMANNSAK 109 (119)
Q Consensus 79 ~~~~---~p~~~~~~~~~~~~~~-~~~wv~~~s~K 109 (119)
++.. .+ ..++++.+.+ ++.++..-++|
T Consensus 307 ~~~~~~~~~----~~~i~vp~~~~~~~ri~~~s~~ 337 (484)
T 4dsg_A 307 GTPPPHLKT----ACWLYFPEDTSPFYRATVFSNY 337 (484)
T ss_dssp SCCCGGGTT----CCEEECCSTTCSCSEEECGGGT
T ss_pred CCCcccCCC----CeEEEEEcCCCeEEEEEeecCC
Confidence 8642 23 4467766643 45566655554
No 13
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.82 E-value=3.4e-08 Score=75.35 Aligned_cols=98 Identities=12% Similarity=-0.018 Sum_probs=72.9
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCC--CCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGS--SGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~--~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
++|+++++|++|..++++| +..+++ ...+|.||+|+|++.+.+||+. .. +.+.+.+.+++|.++..++++++++.
T Consensus 204 ~~i~~~~~V~~i~~~~~~v-V~~~g~-~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~v~l~~~~~~ 280 (421)
T 3nrn_A 204 GKILTRKEVVEINIEEKKV-YTRDNE-EYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEPSEGIKFNLAVPGEP 280 (421)
T ss_dssp CEEESSCCEEEEETTTTEE-EETTCC-EEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCCCCEEEEEEEEESSC
T ss_pred CEEEcCCeEEEEEEECCEE-EEeCCc-EEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCCCceEEEEEEEcCCc
Confidence 6899999999999999999 755443 4469999999999999999973 33 56778889999999999999999874
Q ss_pred CCCCCCceeeEEECCCCcEEEEEecCCC
Q 041088 82 PLGSASTFEGAFVKGVDSVSWMANNSAK 109 (119)
Q Consensus 82 ~~p~~~~~~~~~~~~~~~~~wv~~~s~K 109 (119)
. + ..++.+..++.+..+..-|.+
T Consensus 281 ~-~----~~~~~~~~~~~~~~i~~~s~~ 303 (421)
T 3nrn_A 281 R-I----GNTIVFTPGLMINGFNEPSAL 303 (421)
T ss_dssp S-S----CSSEEECTTSSSCEEECGGGT
T ss_pred c-c----CCeEEEcCCcceeeEeccCCC
Confidence 2 2 223444443224455544444
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.64 E-value=1.2e-07 Score=73.58 Aligned_cols=78 Identities=8% Similarity=-0.045 Sum_probs=65.4
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcC----CCCCHHHHHHhhcCCccceEEEEEeecC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLG----SSGLPQIARQMKRLELSSIWALLAAFED 79 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~----~~~~~~~a~~l~~i~~~p~~~v~l~~~~ 79 (119)
.+|+++++|++|...+++|.|.+.+|....+|+||+|+|+..+..++. ... +...+.++++.|.++..+.|.|++
T Consensus 229 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~~ai~~~~~~~~~kv~l~~~~ 307 (472)
T 1b37_A 229 PRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKVRAIYQFDMAVYTKIFLKFPR 307 (472)
T ss_dssp TTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHHHHHHHSEEECEEEEEEECSS
T ss_pred cEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHHHHHHhcCCcceeEEEEECCC
Confidence 479999999999999999999887775556999999999999988652 233 456678888999999999999998
Q ss_pred CCC
Q 041088 80 PLP 82 (119)
Q Consensus 80 ~~~ 82 (119)
+.+
T Consensus 308 ~~w 310 (472)
T 1b37_A 308 KFW 310 (472)
T ss_dssp CCS
T ss_pred cCC
Confidence 765
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.62 E-value=1.3e-07 Score=73.62 Aligned_cols=77 Identities=6% Similarity=0.015 Sum_probs=63.9
Q ss_pred eEEcCceeEEEEecCCeEEEEeCCcc----ccccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeec
Q 041088 5 SIVRPCWISNLEPFNGMWHLSENVKL----RGQFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFE 78 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~~w~l~~~~g~----~~~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~ 78 (119)
+|+++++|++|...+++|.|...+|. ...+|+||+|+|...+..++ +... +...+.+++++|.++..|+|.|+
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~~~~~kv~l~~~ 332 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHYRSGTKIFLTCT 332 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEES
T ss_pred ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCCcceeEEEEEeC
Confidence 68999999999999999998765442 24699999999999888764 4444 56778889999999999999999
Q ss_pred CCCC
Q 041088 79 DPLP 82 (119)
Q Consensus 79 ~~~~ 82 (119)
++.+
T Consensus 333 ~~~w 336 (498)
T 2iid_A 333 TKFW 336 (498)
T ss_dssp SCGG
T ss_pred CCCc
Confidence 8864
No 16
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.60 E-value=1.5e-07 Score=73.94 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=65.2
Q ss_pred eeEEcCceeEEEEec-CCeEEEEeCCccccccCEEEEcCCHHHHHh-------------hcCCCCCHHHHHHhhcCCccc
Q 041088 4 FSIVRPCWISNLEPF-NGMWHLSENVKLRGQFDVVVIAHKGKCANR-------------LLGSSGLPQIARQMKRLELSS 69 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~-~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~-------------LL~~~~~~~~a~~l~~i~~~p 69 (119)
.+|++|++|++|... ++++.|.+.+|....||+||+|+|...+.. +.++.. +...+.++++.|.+
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp-~~~~~ai~~~~~~~ 293 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLK-PVIQDAFDKIHFGA 293 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCC-HHHHHHTTSSCCCC
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCC-HHHHHHHHhCCCCc
Confidence 359999999999986 667999887775456999999999999853 344555 56778899999999
Q ss_pred eEEEEEeecCCCCC
Q 041088 70 IWALLAAFEDPLPL 83 (119)
Q Consensus 70 ~~~v~l~~~~~~~~ 83 (119)
+.-++|.|+++.+.
T Consensus 294 ~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 294 LGKVIFEFEECCWS 307 (516)
T ss_dssp CEEEEEEESSCCSC
T ss_pred ceEEEEEeCCCCCC
Confidence 99999999998763
No 17
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.55 E-value=2.1e-07 Score=75.70 Aligned_cols=79 Identities=6% Similarity=-0.022 Sum_probs=64.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCC------ccccccCEEEEcCCHHHHHhh------cCCCCCHHHHHHhhcCCccceE
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENV------KLRGQFDVVVIAHKGKCANRL------LGSSGLPQIARQMKRLELSSIW 71 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~------g~~~~~D~VIlA~Pa~qaa~L------L~~~~~~~~a~~l~~i~~~p~~ 71 (119)
++|++|++|++|...++++.|.+.+ +....||+||+|+|...+.++ .+... +...+.++++.|.++.
T Consensus 411 l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP-~~k~~Ai~~l~~g~~~ 489 (662)
T 2z3y_A 411 LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLP-EWKTSAVQRMGFGNLN 489 (662)
T ss_dssp CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCC-HHHHHHHHHSEECCCE
T ss_pred CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCC-HHHHHHHHhCCcccee
Confidence 5799999999999999999887643 344569999999999999874 34444 4456778999999999
Q ss_pred EEEEeecCCCCC
Q 041088 72 ALLAAFEDPLPL 83 (119)
Q Consensus 72 ~v~l~~~~~~~~ 83 (119)
-|+|.|+++.+.
T Consensus 490 KV~l~f~~~fW~ 501 (662)
T 2z3y_A 490 KVVLCFDRVFWD 501 (662)
T ss_dssp EEEEECSSCCSC
T ss_pred EEEEEcCccccc
Confidence 999999998763
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.49 E-value=3.5e-07 Score=75.95 Aligned_cols=78 Identities=6% Similarity=-0.049 Sum_probs=65.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHh----hcCCCCCHHHHHHhhcCCccceEEEEEeecC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANR----LLGSSGLPQIARQMKRLELSSIWALLAAFED 79 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~----LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~ 79 (119)
++|+++++|++|+..+++|.|...+|....+|+||+|+|...+.+ +.+... +...+.+..+.|.++.-+.|.|++
T Consensus 544 l~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp-~~~~~ai~~l~~g~~~KV~l~f~~ 622 (776)
T 4gut_A 544 LDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLS-EKKMKAINSLGAGIIEKIALQFPY 622 (776)
T ss_dssp SCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCC-HHHHHHHHHEEEECCEEEEEECSS
T ss_pred CcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCC-HHHHHHHHhCCCeeEEEEEEecCc
Confidence 579999999999999999999887775556999999999999875 334444 566778889999999999999999
Q ss_pred CCC
Q 041088 80 PLP 82 (119)
Q Consensus 80 ~~~ 82 (119)
+.+
T Consensus 623 ~FW 625 (776)
T 4gut_A 623 RFW 625 (776)
T ss_dssp CTT
T ss_pred ccc
Confidence 865
No 19
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.45 E-value=4.4e-07 Score=76.06 Aligned_cols=79 Identities=6% Similarity=-0.039 Sum_probs=64.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCC------ccccccCEEEEcCCHHHHHhhc------CCCCCHHHHHHhhcCCccceE
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENV------KLRGQFDVVVIAHKGKCANRLL------GSSGLPQIARQMKRLELSSIW 71 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~------g~~~~~D~VIlA~Pa~qaa~LL------~~~~~~~~a~~l~~i~~~p~~ 71 (119)
+.|++|++|++|...++++.|.+.+ +....+|+||+|+|...+.+++ +... +...+.++++.|.++.
T Consensus 582 l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP-~~k~~AI~~l~~g~v~ 660 (852)
T 2xag_A 582 LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLP-EWKTSAVQRMGFGNLN 660 (852)
T ss_dssp CCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCC-HHHHHHHHHSEECCCE
T ss_pred CCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCC-HHHHHHHHcCCccceE
Confidence 4799999999999999999887533 3445699999999999998852 3334 4456678999999999
Q ss_pred EEEEeecCCCCC
Q 041088 72 ALLAAFEDPLPL 83 (119)
Q Consensus 72 ~v~l~~~~~~~~ 83 (119)
-|+|.|+++.+.
T Consensus 661 KV~L~F~~~fW~ 672 (852)
T 2xag_A 661 KVVLCFDRVFWD 672 (852)
T ss_dssp EEEEECSSCCSC
T ss_pred EEEEEcCCcccC
Confidence 999999998763
No 20
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.40 E-value=4.7e-07 Score=70.43 Aligned_cols=74 Identities=9% Similarity=0.054 Sum_probs=59.0
Q ss_pred eeEEcCceeEEEEecCCe------EEEEeC--Cc---cccccCEEEEcCCHHHHHhhcC-----CCCCHHHHHHhhcCCc
Q 041088 4 FSIVRPCWISNLEPFNGM------WHLSEN--VK---LRGQFDVVVIAHKGKCANRLLG-----SSGLPQIARQMKRLEL 67 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~------w~l~~~--~g---~~~~~D~VIlA~Pa~qaa~LL~-----~~~~~~~a~~l~~i~~ 67 (119)
.+|++|++|++|...+++ |.|... +| ....||+||+|+|++.+.+|+. +.. + ..+..++|
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~-~---~~l~~~~~ 331 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFL-L---NFIPEVDY 331 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCC-C---TTSCCCCE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCccc-H---HHHhcCCC
Confidence 469999999999998877 888753 34 3446899999999999999983 222 2 23788899
Q ss_pred cceEEEEEeecCCC
Q 041088 68 SSIWALLAAFEDPL 81 (119)
Q Consensus 68 ~p~~~v~l~~~~~~ 81 (119)
.++..++|.|+++.
T Consensus 332 ~~~~~v~l~~~~~~ 345 (504)
T 1sez_A 332 VPLSVVITTFKREN 345 (504)
T ss_dssp EEEEEEEEEEEGGG
T ss_pred CceEEEEEEEchhh
Confidence 99999999998865
No 21
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.35 E-value=1.3e-06 Score=67.71 Aligned_cols=74 Identities=8% Similarity=-0.040 Sum_probs=61.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
.++|+++++|++|..+++++. ..+|....+|+||+|+|.+.+.++|.+ +.....+..++|.++.+|.|+|+...
T Consensus 236 g~~i~~~~~V~~I~~~~~~v~--~~~G~~~~ad~vI~t~P~~~l~~~l~~---~~~~~~~~~l~y~~~~~v~l~~~~~~ 309 (513)
T 4gde_A 236 KTRFGEKGKVTKVNANNKTVT--LQDGTTIGYKKLVSTMAVDFLAEAMND---QELVGLTKQLFYSSTHVIGVGVRGSR 309 (513)
T ss_dssp GEEESGGGCEEEEETTTTEEE--ETTSCEEEEEEEEECSCHHHHHHHTTC---HHHHHHHTTCCEEEEEEEEEEEESSC
T ss_pred CeeeecceEEEEEEccCCEEE--EcCCCEEECCEEEECCCHHHHHHhcCc---hhhHhhhhcccCCceEEEEEEEeccc
Confidence 468999999999998877654 445655579999999999999999975 45667778999999999999997753
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.20 E-value=3.5e-06 Score=64.04 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=52.0
Q ss_pred eEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceE
Q 041088 5 SIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIW 71 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~ 71 (119)
+|+++++|++|.+.+++|.|..++|. ..||+||+|+|++++.++++.. +...+.+.++.|.+..
T Consensus 219 ~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 282 (424)
T 2b9w_A 219 PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLDYSDAD--DDEREYFSKIIHQQYM 282 (424)
T ss_dssp CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTTSBCCC--HHHHHHHTTCEEEEEE
T ss_pred eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhhccCCC--HHHHHHHhcCCcceeE
Confidence 58899999999998889998887775 4699999999999999988753 3444567888887744
No 23
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.20 E-value=4.7e-06 Score=63.39 Aligned_cols=76 Identities=8% Similarity=-0.018 Sum_probs=62.3
Q ss_pred eEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 5 SIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
+|+++++|++|+..++++.|.+.+|....+|+||+|+|.+.+..+. +... +...+.+..+.|.....+.+.|+.+.
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCcceEEEEEEECCCC
Confidence 7999999999999988999988777545799999999999988874 3334 44556677788888899999998875
No 24
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.09 E-value=1.5e-05 Score=61.71 Aligned_cols=79 Identities=14% Similarity=0.083 Sum_probs=45.2
Q ss_pred eeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCHHHHHh-hcCCCCC-HHHHHHhhcCCcc-ceEEEEEeecC
Q 041088 4 FSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGKCANR-LLGSSGL-PQIARQMKRLELS-SIWALLAAFED 79 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~qaa~-LL~~~~~-~~~a~~l~~i~~~-p~~~v~l~~~~ 79 (119)
++|++|++|++|..+++++. |...+|....+|+||++++++.+.. |++.... ......+...++. ++.++++++++
T Consensus 236 g~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 315 (501)
T 4dgk_A 236 GEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNH 315 (501)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEEEEEEEESS
T ss_pred CceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeEEEecccC
Confidence 58999999999999999876 7777776667999999998887765 5554321 2334555666554 47788888888
Q ss_pred CCC
Q 041088 80 PLP 82 (119)
Q Consensus 80 ~~~ 82 (119)
+..
T Consensus 316 ~~~ 318 (501)
T 4dgk_A 316 HHD 318 (501)
T ss_dssp CCT
T ss_pred Ccc
Confidence 654
No 25
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.92 E-value=0.0024 Score=52.81 Aligned_cols=79 Identities=10% Similarity=0.041 Sum_probs=57.8
Q ss_pred eEEcCceeE--EEEecCCe-------EEE-EeCCcc--ccccCEEEEcCCHHHHHh------h--------c--------
Q 041088 5 SIVRPCWIS--NLEPFNGM-------WHL-SENVKL--RGQFDVVVIAHKGKCANR------L--------L-------- 50 (119)
Q Consensus 5 ~i~~~~~V~--~i~~~~~~-------w~l-~~~~g~--~~~~D~VIlA~Pa~qaa~------L--------L-------- 50 (119)
.|+++++|+ +|...+++ ..| ...+|. ...||.||+|+|...+.. + +
T Consensus 362 ~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~ 441 (721)
T 3ayj_A 362 AGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLET 441 (721)
T ss_dssp TTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCC
T ss_pred ceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhcccccccccccccccccccccccc
Confidence 478899999 99987554 777 344454 456999999999999854 1 1
Q ss_pred -------CCCC-C-------HHHHHHhhcCCccceEEEEEee-----cCCCCC
Q 041088 51 -------GSSG-L-------PQIARQMKRLELSSIWALLAAF-----EDPLPL 83 (119)
Q Consensus 51 -------~~~~-~-------~~~a~~l~~i~~~p~~~v~l~~-----~~~~~~ 83 (119)
++.. . ....+.++++.|.+..=+.+.| +++.+.
T Consensus 442 ~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~ 494 (721)
T 3ayj_A 442 HTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVP 494 (721)
T ss_dssp EEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSC
T ss_pred ccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccc
Confidence 1111 1 2456788999999999999999 787764
No 26
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.91 E-value=0.0004 Score=52.45 Aligned_cols=56 Identities=9% Similarity=-0.102 Sum_probs=44.1
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
++|++|++|.+|.. .| ...||+||+|+|++++.++ .+.+++|.++.++.+.|+++.
T Consensus 205 ~~i~l~~~V~~i~~---~v--------~~~~D~VV~a~p~~~~~~~-----------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 205 VDVKLGIDFLKDKD---SL--------ASKAHRIIYTGPIDQYFDY-----------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp SEEECSCCGGGSHH---HH--------HTTEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSC
T ss_pred CEEEeCCceeeech---hh--------hccCCEEEEeccHHHHHHH-----------hhCCCCCceEEEEEEEecccc
Confidence 47899999988853 12 1258999999999997654 356799999999999998763
No 27
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.51 E-value=0.0012 Score=50.05 Aligned_cols=49 Identities=10% Similarity=0.001 Sum_probs=39.1
Q ss_pred eeEEcCceeE-EEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeec
Q 041088 4 FSIVRPCWIS-NLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFE 78 (119)
Q Consensus 4 ~~i~~~~~V~-~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~ 78 (119)
.+|+++++|. +|.+ .||+||+|+|++++.++ .+.+++|.++.++.+.++
T Consensus 211 ~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~-----------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 211 IKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY-----------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp EEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEEE
T ss_pred CEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh-----------hcCCCCcceEEEEEEEeC
Confidence 4567777776 5532 28999999999998876 246789999999999997
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.49 E-value=0.0012 Score=50.35 Aligned_cols=58 Identities=7% Similarity=-0.193 Sum_probs=45.0
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
.+|++|++|++|.+. | + ....||+||+|+|++++.++ .+++++|.++..+.+.++.+.
T Consensus 217 ~~I~l~~~V~~I~~~---v----~--~~~~aD~VI~t~p~~~l~~~-----------~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 217 IEVRLNTDWFDVRGQ---L----R--PGSPAAPVVYTGPLDRYFDY-----------AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp EEEECSCCHHHHHHH---H----T--TTSTTCCEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSC
T ss_pred eEEEECCchhhhhhh---h----h--hcccCCEEEECCcHHHHHhh-----------hhCCCCcceEEEEEEEEcccc
Confidence 579999999988643 2 1 12158999999999998776 246789999999999997754
No 29
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.75 E-value=0.026 Score=45.69 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=37.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL 50 (119)
.++|+++++|++|..++++|.|...+|....+|.||+|+-+. +..|+
T Consensus 431 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~-s~~l~ 477 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ-ISRFS 477 (676)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG-GGCST
T ss_pred CCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc-hhccc
Confidence 368999999999999999999988665445689999999776 34443
No 30
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.69 E-value=0.023 Score=46.15 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=37.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCcc-ccccCEEEEcCCHHHHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKL-RGQFDVVVIAHKGKCANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~-~~~~D~VIlA~Pa~qaa~LL 50 (119)
.++|+++++|++|..++++|.|.+.+|. ...+|.||+|+-++ +..|+
T Consensus 426 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~-s~~l~ 473 (689)
T 3pvc_A 426 GMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR-LPEWE 473 (689)
T ss_dssp TCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG-TTCST
T ss_pred CCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc-hhccc
Confidence 3689999999999999999999887664 45689999999877 44443
No 31
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.55 E-value=0.012 Score=43.33 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=35.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
-++|+++++|++|..++++|.|.+++| ...+|+||+|+-++.
T Consensus 168 Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp TCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 368899999999999999999988777 446899999997653
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.41 E-value=0.02 Score=42.37 Aligned_cols=41 Identities=12% Similarity=-0.093 Sum_probs=34.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|...+++|.+..++| ...+|.||+|+...
T Consensus 178 g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 178 GAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp TCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred CCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 368999999999999888898887766 44689999999875
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.36 E-value=0.022 Score=43.15 Aligned_cols=48 Identities=10% Similarity=-0.067 Sum_probs=38.6
Q ss_pred ceeEEcCc---eeEEEEecCCeEE-EEeCCccccccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPC---WISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~---~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
-++|++++ +|++|..++++|. |.+.+|....+|.||+|+-++ +.+|++
T Consensus 175 Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 175 GVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp TCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGG-GGGTSC
T ss_pred CCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCC-hhhhcC
Confidence 36899999 9999999888988 888777445689999999877 345554
No 34
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.20 E-value=0.06 Score=39.71 Aligned_cols=47 Identities=6% Similarity=0.032 Sum_probs=36.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
.++|+++++|++|+..+++|.+.+++|. ..+|.||+|+-++. ..|++
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~~a~~vV~A~G~~~-~~l~~ 210 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANGS-YTADKLIVSMGAWN-SKLLS 210 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTEE-EEEEEEEECCGGGH-HHHGG
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCCE-EEeCEEEEecCccH-HHHhh
Confidence 3689999999999998888998877663 46899999998753 34443
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.12 E-value=0.027 Score=43.22 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=35.7
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|..++++|.+...+| ...+|.||+|+-...
T Consensus 146 Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 146 GVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 468999999999999999999998777 456999999987553
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.03 E-value=0.031 Score=40.74 Aligned_cols=42 Identities=10% Similarity=-0.171 Sum_probs=34.3
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCc--cccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVK--LRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g--~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++ |.+..++| ....+|.||+|+-++
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 164 GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp TCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred CCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcc
Confidence 3689999999999998776 99887666 345689999999765
No 37
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.86 E-value=0.026 Score=40.85 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=34.3
Q ss_pred ceeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|++|...+++|. +..++| ...||.||+|+-.
T Consensus 90 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 90 ALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp TCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCS
T ss_pred CCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCC
Confidence 357899999999999999999 988777 4569999999874
No 38
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.85 E-value=0.05 Score=35.66 Aligned_cols=50 Identities=8% Similarity=-0.066 Sum_probs=40.9
Q ss_pred ccCEEEEcCCHHHHHhhc--CCCCCHHHHHHhhcCCccceEEEEEeecCCCCC
Q 041088 33 QFDVVVIAHKGKCANRLL--GSSGLPQIARQMKRLELSSIWALLAAFEDPLPL 83 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL--~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~~~ 83 (119)
.+|+||+|+|...+..+. ++.. +...+.++++.|.+..=+++.|+++.+-
T Consensus 7 ~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 7 TGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp EESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred EcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 589999999999987653 2334 5667788999999999999999998774
No 39
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.67 E-value=0.036 Score=40.78 Aligned_cols=46 Identities=9% Similarity=-0.008 Sum_probs=37.1
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
++|+++++|++|+.++++|.+.+++|. ..+|.||+|+-++. ..|++
T Consensus 164 ~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 164 CAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp CEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGG-GGTST
T ss_pred CEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccH-Hhhcc
Confidence 678999999999998888998887764 46899999998763 44544
No 40
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.46 E-value=0.032 Score=42.66 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=32.3
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCC---cc---ccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENV---KL---RGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~---g~---~~~~D~VIlA~Pa 43 (119)
..|+++++|++|...+++|.|...+ |. ...||.||+|+-.
T Consensus 130 ~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 130 PFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp GGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred CeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 3588999999999988899987643 43 4579999999865
No 41
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.40 E-value=0.049 Score=39.90 Aligned_cols=41 Identities=10% Similarity=0.188 Sum_probs=33.7
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++++++++|.+|.+.+++|.|...++. ..||.||+|+-..
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTET-YHADYIFVATGDY 142 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSCC-EEEEEEEECCCST
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCCE-EEeCEEEECCCCC
Confidence 3678999999999998888999887664 4689999998653
No 42
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.23 E-value=0.057 Score=39.08 Aligned_cols=40 Identities=13% Similarity=-0.037 Sum_probs=33.4
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
++++++++|..|...++.|.+..++|....||.||+|+-.
T Consensus 80 ~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 80 PVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp CEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred CEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCC
Confidence 5788999999999888889998876644569999999864
No 43
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.20 E-value=0.043 Score=36.46 Aligned_cols=39 Identities=3% Similarity=0.111 Sum_probs=32.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++ +|++++.++++|.+..++| ...+|.||+|+-.
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 3688999 9999998888899988777 4569999999854
No 44
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.16 E-value=0.053 Score=40.64 Aligned_cols=42 Identities=10% Similarity=-0.050 Sum_probs=35.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|+.++++|.+...+|....+|.||.|.-..
T Consensus 111 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 111 PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp STTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred CcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 357999999999999999999988777556799999997543
No 45
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.15 E-value=0.075 Score=39.21 Aligned_cols=41 Identities=12% Similarity=-0.070 Sum_probs=34.4
Q ss_pred ceeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++|. +.+.+| ...+|.||+|+-++
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchh
Confidence 368999999999999888888 887766 44689999999765
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.11 E-value=0.065 Score=41.08 Aligned_cols=43 Identities=23% Similarity=0.062 Sum_probs=34.7
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|..++++ |.|...+|....+|.||+|+-...
T Consensus 148 GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 148 GVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 4789999999999987777 888887775456899999986443
No 47
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.06 E-value=0.055 Score=40.56 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=34.6
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.+|+++++|++|+.++++|.+...+|....+|.||.|.-..
T Consensus 141 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 141 DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTT
T ss_pred CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcc
Confidence 46899999999999888999988777555799999998654
No 48
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.00 E-value=0.028 Score=43.10 Aligned_cols=41 Identities=5% Similarity=-0.149 Sum_probs=32.0
Q ss_pred eeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCHHH
Q 041088 4 FSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
++|+++++|++|...++++. +..+ |....+|+||+|+++..
T Consensus 249 ~~i~~~~~V~~I~~~~~~v~~v~~~-g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 249 GTYMLNKPVDDIIMENGKVVGVKSE-GEVARCKQLICDPSYVP 290 (433)
T ss_dssp CCCBCSCCCCEEEEETTEEEEEEET-TEEEECSEEEECGGGCG
T ss_pred CEEECCCEEEEEEEeCCEEEEEEEC-CeEEECCEEEECCCCCc
Confidence 57899999999998888765 4444 43446899999998763
No 49
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.85 E-value=0.071 Score=39.70 Aligned_cols=41 Identities=12% Similarity=-0.058 Sum_probs=34.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++|.+..++|. ..+|.||+|+-++
T Consensus 167 Gv~i~~~~~V~~i~~~~~~v~v~t~~g~-i~a~~VV~A~G~~ 207 (397)
T 2oln_A 167 GATLRAGETVTELVPDADGVSVTTDRGT-YRAGKVVLACGPY 207 (397)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEESSCE-EEEEEEEECCGGG
T ss_pred CCEEECCCEEEEEEEcCCeEEEEECCCE-EEcCEEEEcCCcC
Confidence 3689999999999998889988876663 4689999999765
No 50
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.83 E-value=0.067 Score=40.08 Aligned_cols=40 Identities=10% Similarity=-0.143 Sum_probs=34.6
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
++|+++++|++|+.++++|.+...+|....+|.||.|.-.
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGS 179 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCT
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCc
Confidence 5789999999999999999999877765679999999754
No 51
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.77 E-value=0.079 Score=38.00 Aligned_cols=40 Identities=15% Similarity=0.103 Sum_probs=33.8
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|.++...++ .|.+...+|. ..||.||+|+-.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 367899999999998876 7999987775 569999999865
No 52
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.70 E-value=0.069 Score=39.86 Aligned_cols=49 Identities=16% Similarity=-0.073 Sum_probs=38.4
Q ss_pred ceeEEcCceeEEEEecCCeE--EEEeCCccccccCEEEEcCCHHH-HHhhcC
Q 041088 3 MFSIVRPCWISNLEPFNGMW--HLSENVKLRGQFDVVVIAHKGKC-ANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w--~l~~~~g~~~~~D~VIlA~Pa~q-aa~LL~ 51 (119)
.++|+++++|++|+.++++| .+...+|....+|.||.|+-... ..+++.
T Consensus 122 gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 122 TVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp TEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred CcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 47899999999999998899 88887775557899999986433 444553
No 53
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=93.65 E-value=0.092 Score=39.94 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=33.2
Q ss_pred ceeEEcCceeEEEEec----CCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPF----NGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~----~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..+ +++|.+..++| ...+|.||+|+-..
T Consensus 123 Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~ 167 (401)
T 2gqf_A 123 GAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGL 167 (401)
T ss_dssp TCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCS
T ss_pred CCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCc
Confidence 4789999999999977 67799988766 44689999998543
No 54
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.50 E-value=0.089 Score=40.08 Aligned_cols=40 Identities=10% Similarity=-0.006 Sum_probs=32.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---Ccc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g~--~~~~D~VIlA~P 42 (119)
.++|+++++|++++..+++|.|... +|. ...+|.||+|+-
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATG 374 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCC
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeC
Confidence 5789999999999998899988763 443 356999999984
No 55
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.17 E-value=0.14 Score=38.28 Aligned_cols=40 Identities=13% Similarity=-0.147 Sum_probs=33.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+...+|....+|.||+|+.
T Consensus 201 gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 201 GVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcC
Confidence 4689999999999988888888877675557999999985
No 56
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.05 E-value=0.14 Score=39.60 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=33.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+...+|....+|.||+|+.
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G 285 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATG 285 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCC
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeC
Confidence 3689999999999998888888887775556999999985
No 57
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.82 E-value=0.16 Score=38.87 Aligned_cols=40 Identities=13% Similarity=-0.041 Sum_probs=33.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+...+|....+|.||+|+.
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G 261 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVG 261 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcC
Confidence 3689999999999988888888776665557999999974
No 58
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.68 E-value=0.11 Score=41.17 Aligned_cols=39 Identities=10% Similarity=0.028 Sum_probs=33.0
Q ss_pred eEEcCceeEEEEecCC--eEEEEeCCccccccCEEEEcCCH
Q 041088 5 SIVRPCWISNLEPFNG--MWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~--~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
+++++++|+++..+++ +|.|..++|....+|.||+|+-.
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 6899999999988765 79999887765579999999873
No 59
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.67 E-value=0.27 Score=37.21 Aligned_cols=47 Identities=15% Similarity=-0.033 Sum_probs=34.7
Q ss_pred ceeEEcCceeEEEEe---------------cCCe-EEEEeCCcccc--ccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPCWISNLEP---------------FNGM-WHLSENVKLRG--QFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~---------------~~~~-w~l~~~~g~~~--~~D~VIlA~Pa~qaa~LL~ 51 (119)
.++|+++++|++|.. .+++ |.+..++| .. .+|.||+|+-++. .+|++
T Consensus 195 Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l~~ 259 (448)
T 3axb_A 195 GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRLLN 259 (448)
T ss_dssp TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHHHG
T ss_pred CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHHHH
Confidence 368999999999987 5555 57777766 34 6899999998763 34443
No 60
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.66 E-value=0.11 Score=41.19 Aligned_cols=39 Identities=10% Similarity=0.008 Sum_probs=33.0
Q ss_pred eEEcCceeEEEEecCC--eEEEEeCCccccccCEEEEcCCH
Q 041088 5 SIVRPCWISNLEPFNG--MWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~--~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
+|+++++|+++...++ +|.|..++|....+|.||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 6899999999998765 79999887765579999999864
No 61
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.60 E-value=0.21 Score=38.20 Aligned_cols=39 Identities=8% Similarity=-0.036 Sum_probs=30.7
Q ss_pred cccCEEEEcCCHHHHHhhcCCCCCHHHHHHhhcCCccceEEEEEeecCCC
Q 041088 32 GQFDVVVIAHKGKCANRLLGSSGLPQIARQMKRLELSSIWALLAAFEDPL 81 (119)
Q Consensus 32 ~~~D~VIlA~Pa~qaa~LL~~~~~~~~a~~l~~i~~~p~~~v~l~~~~~~ 81 (119)
..+|+||.|+|.+..... .+..++|.+...+.++++.+.
T Consensus 250 ~~~d~vI~T~P~d~~~~~-----------~~g~L~yrsl~~~~~~~~~~~ 288 (397)
T 3hdq_A 250 IPFQHMIYTGPVDAFFDF-----------CYGKLPYRSLEFRHETHDTEQ 288 (397)
T ss_dssp SCEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSC
T ss_pred ccCCEEEEcCCHHHHHHH-----------hcCCCCCceEEEEEEEecccc
Confidence 358999999998876321 246789999999999998653
No 62
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.38 E-value=0.18 Score=39.08 Aligned_cols=40 Identities=0% Similarity=-0.151 Sum_probs=32.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++|+++++|++|+.+++++.+...+|....+|.||+|+.
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIG 276 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCC
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCC
Confidence 3689999999999988777877776665557999999984
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.32 E-value=0.18 Score=36.95 Aligned_cols=41 Identities=12% Similarity=0.000 Sum_probs=33.3
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|+.|...++ .|.+...+|....+|.||+|+-.
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCC
Confidence 367889999999998765 79998877645569999999865
No 64
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.21 E-value=0.2 Score=38.49 Aligned_cols=40 Identities=20% Similarity=0.019 Sum_probs=32.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..+++..+...+|....+|.||+|+.
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G 255 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAG 255 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSC
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCC
Confidence 4789999999999987777777766665557999999985
No 65
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.89 E-value=0.17 Score=36.02 Aligned_cols=40 Identities=10% Similarity=0.031 Sum_probs=30.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.+++++ ++|.+|...++.|.+..++|....||.||+|+-.
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~ 123 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGV 123 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCC
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCC
Confidence 356777 8999999998899998877655569999999743
No 66
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.88 E-value=0.25 Score=37.71 Aligned_cols=39 Identities=10% Similarity=-0.083 Sum_probs=32.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+..++| ...+|.||+|+.
T Consensus 203 GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G 241 (452)
T 3oc4_A 203 AVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALN 241 (452)
T ss_dssp TEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcC
Confidence 478999999999998777877777766 456999999975
No 67
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.85 E-value=0.17 Score=39.87 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=32.7
Q ss_pred eeEEcCceeEEEEecC--CeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFN--GMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~--~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.+|+++++|.+++.++ +.|.|..++|....+|.||+|+-.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 4689999999999865 479999877755569999999864
No 68
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.60 E-value=0.27 Score=37.84 Aligned_cols=40 Identities=18% Similarity=-0.042 Sum_probs=33.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCcc-ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKL-RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~-~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+...+|. ...+|.||+|+.
T Consensus 221 gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G 261 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVG 261 (463)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCC
Confidence 4789999999999987777888877776 567999999973
No 69
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.60 E-value=0.23 Score=36.68 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=33.5
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++++++++|++|..++++ |.+..++| ...+|.||+|+-+..
T Consensus 188 g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 188 GVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred CCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 3689999999999987765 77877766 446899999997653
No 70
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.54 E-value=0.17 Score=39.01 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=29.9
Q ss_pred EEcCceeEEEEecCC--eEEEEeCC---c--cccccCEEEEcCCH
Q 041088 6 IVRPCWISNLEPFNG--MWHLSENV---K--LRGQFDVVVIAHKG 43 (119)
Q Consensus 6 i~~~~~V~~i~~~~~--~w~l~~~~---g--~~~~~D~VIlA~Pa 43 (119)
|+++++|+.|.+.++ +|.|...+ | ....||.||+|+-.
T Consensus 120 i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 120 IRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred EEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 889999999998766 79887633 3 34469999999873
No 71
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.52 E-value=0.27 Score=34.53 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=30.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
+.+. +++|+.|...+++|.+...+|....||.||+|+-.
T Consensus 72 v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 72 IHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp EEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred eEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 3443 45899999999999999877755579999999754
No 72
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.47 E-value=0.24 Score=37.45 Aligned_cols=40 Identities=5% Similarity=-0.156 Sum_probs=32.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.++....+...+|....+|.||+++.
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G 238 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVG 238 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSC
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeC
Confidence 4789999999999876655677776775567999999985
No 73
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.44 E-value=0.25 Score=35.18 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=31.7
Q ss_pred ceeEEcCceeEEEEecC---CeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFN---GMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~---~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|..+.... +.|.+..++|....||.||+|+-
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG 112 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATG 112 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCC
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcC
Confidence 46889999999997653 37999887664456999999974
No 74
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.40 E-value=0.32 Score=36.62 Aligned_cols=40 Identities=8% Similarity=-0.095 Sum_probs=32.1
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|..++++. .+...+|....+|.||+++.
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G 248 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIG 248 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSC
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 47899999999999877664 57776775567999999975
No 75
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.28 E-value=0.25 Score=37.23 Aligned_cols=38 Identities=11% Similarity=0.310 Sum_probs=29.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|++|.+.+.. +...+|....||.||+||-
T Consensus 76 ~i~~~~~~~V~~id~~~~~--v~~~~g~~~~yd~lvlAtG 113 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKL--VTLKSGEKIKYEKLIIASG 113 (385)
T ss_dssp TCEEECSCCEEEEETTTTE--EEETTSCEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCCE--EEECCCCEEECCEEEEecC
Confidence 4688999999999887764 4555564556999999975
No 76
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.26 E-value=0.27 Score=38.52 Aligned_cols=40 Identities=13% Similarity=-0.022 Sum_probs=32.3
Q ss_pred ceeEEcCceeEEEEecCCe----EEEEeCCcc-ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGM----WHLSENVKL-RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~----w~l~~~~g~-~~~~D~VIlA~P 42 (119)
.++++++++|++|...+++ +.+..++|. ...+|.||+|+.
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcC
Confidence 3789999999999986665 778877664 567999999973
No 77
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=90.98 E-value=0.3 Score=39.01 Aligned_cols=42 Identities=14% Similarity=-0.072 Sum_probs=33.9
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++ +.+..++|....+|.||+|+-..
T Consensus 234 Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 234 GGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp TCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTT
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 4789999999999988776 55887777556799999998653
No 78
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.96 E-value=0.35 Score=37.56 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=32.7
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|...+++..+...+|....+|.||+++.
T Consensus 240 GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G 279 (493)
T 1m6i_A 240 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVG 279 (493)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCC
Confidence 4789999999999887777777776775567999999974
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.86 E-value=0.32 Score=34.65 Aligned_cols=39 Identities=8% Similarity=-0.050 Sum_probs=30.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.+++++ ++|..|...+++|.+...+|....+|.||+|+-
T Consensus 73 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG 111 (311)
T 2q0l_A 73 GLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATG 111 (311)
T ss_dssp SCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCC
Confidence 356777 789999988888998776665556999999975
No 80
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=90.73 E-value=0.16 Score=38.95 Aligned_cols=40 Identities=8% Similarity=-0.081 Sum_probs=31.1
Q ss_pred eeEEcCceeEEEEec--CCeE-EEEeCCccccccCEEEEcCCHH
Q 041088 4 FSIVRPCWISNLEPF--NGMW-HLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~--~~~w-~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
++|+++++|++|... ++++ .+..+++ ...+|+||++++++
T Consensus 257 ~~i~~~~~V~~i~~~~~~~~~~~V~~~g~-~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 257 GTYMLDTPIDEVLYKKDTGKFEGVKTKLG-TFKAPLVIADPTYF 299 (453)
T ss_dssp CEEECSCCCCEEEEETTTTEEEEEEETTE-EEECSCEEECGGGC
T ss_pred CEEECCCEEEEEEEECCCCeEEEEEECCe-EEECCEEEECCCcc
Confidence 579999999999987 6664 5666543 44689999999876
No 81
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.68 E-value=0.19 Score=39.84 Aligned_cols=38 Identities=5% Similarity=0.050 Sum_probs=32.0
Q ss_pred eEEcCceeEEEEecC--CeEEEEeCCccccccCEEEEcCC
Q 041088 5 SIVRPCWISNLEPFN--GMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~--~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
+++++++|+++..++ +.|.|..++|....+|.||+|+-
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 688999999998765 47999988775557999999987
No 82
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=90.58 E-value=0.44 Score=35.79 Aligned_cols=40 Identities=8% Similarity=-0.093 Sum_probs=31.9
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|...+++. .+...+|....+|.||+++.
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCC
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcC
Confidence 47899999999998876654 47777775567999999984
No 83
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.37 E-value=0.29 Score=38.46 Aligned_cols=38 Identities=5% Similarity=-0.137 Sum_probs=30.0
Q ss_pred eeEEcCceeEEEEe-cCCe-EEEEeCCccccccCEEEEcC
Q 041088 4 FSIVRPCWISNLEP-FNGM-WHLSENVKLRGQFDVVVIAH 41 (119)
Q Consensus 4 ~~i~~~~~V~~i~~-~~~~-w~l~~~~g~~~~~D~VIlA~ 41 (119)
++|+++++|++|.. .+++ +.|...+|....+|+||+++
T Consensus 271 g~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~ 310 (475)
T 3p1w_A 271 GTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDP 310 (475)
T ss_dssp -CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECG
T ss_pred CEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECC
Confidence 57999999999998 5554 67877776555699999997
No 84
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=90.25 E-value=0.42 Score=36.53 Aligned_cols=39 Identities=8% Similarity=-0.134 Sum_probs=31.5
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcC
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAH 41 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~ 41 (119)
.++++++++|.+|+..+++ +.+...+|....+|.||+|+
T Consensus 222 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~ 261 (450)
T 1ges_A 222 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAI 261 (450)
T ss_dssp SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECS
T ss_pred CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECC
Confidence 3689999999999887654 77877666555799999997
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.07 E-value=0.19 Score=38.24 Aligned_cols=39 Identities=8% Similarity=-0.068 Sum_probs=28.7
Q ss_pred eeEEcCceeEEEEec---CCeE--EEEeCCcc----ccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPF---NGMW--HLSENVKL----RGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~---~~~w--~l~~~~g~----~~~~D~VIlA~P 42 (119)
.+++++++|++|++. ++.| .+...+|. ...||.||+|+-
T Consensus 142 ~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 142 EQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred CeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 468999999999987 5556 55543332 456999999974
No 86
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.80 E-value=0.49 Score=36.70 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=32.0
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++|+++++|.+|+..++ .+.+...+|....+|.||+|+.
T Consensus 245 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G 285 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIG 285 (490)
T ss_dssp TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccC
Confidence 478999999999988764 4777776665557999999984
No 87
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.12 E-value=0.54 Score=35.97 Aligned_cols=39 Identities=13% Similarity=-0.114 Sum_probs=32.0
Q ss_pred ceeEEcCceeEEEEecCCe-EEEE-eCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLS-ENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~-~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..+++ +.+. .++|. ..+|.||+|+.
T Consensus 225 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G 265 (463)
T 4dna_A 225 GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALG 265 (463)
T ss_dssp TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSC
T ss_pred CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeC
Confidence 3689999999999987665 6777 77676 67999999985
No 88
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=89.02 E-value=0.56 Score=36.45 Aligned_cols=40 Identities=15% Similarity=0.006 Sum_probs=31.8
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++ ...+...+|....+|.||+|+.
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G 289 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIG 289 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCC
Confidence 478999999999988764 4777776665557999999984
No 89
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=88.83 E-value=0.59 Score=36.04 Aligned_cols=40 Identities=10% Similarity=0.000 Sum_probs=31.2
Q ss_pred ceeEEcCceeEEEEecCCe--EEEEeCCc-cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGM--WHLSENVK-LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~--w~l~~~~g-~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..+++ ..+...+| ....+|.||+|+.
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G 282 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIG 282 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSC
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCC
Confidence 3789999999999876555 67777666 5567999999985
No 90
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=88.75 E-value=0.54 Score=36.22 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=31.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCC----ccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENV----KLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~----g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.++++..+...+ |....+|.||+|+.
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G 283 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAG 283 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCC
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcC
Confidence 47899999999999887776666543 44446999999984
No 91
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=88.68 E-value=0.77 Score=31.78 Aligned_cols=40 Identities=10% Similarity=-0.088 Sum_probs=30.7
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++ +++|++|..++++ |.+...+|....+|.||+|+-.
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCC
Confidence 46677 5799999887776 5677766655569999999876
No 92
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.57 E-value=0.48 Score=34.80 Aligned_cols=41 Identities=12% Similarity=-0.134 Sum_probs=31.9
Q ss_pred ceeEEcCceeEEEEecCCeEE-EEe---CCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LSE---NVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~~---~~g~~~~~D~VIlA~Pa 43 (119)
.++|+++++|+++..+++++. +.. +++....+|.||.|+-.
T Consensus 116 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 468999999999999888876 655 23445568999999854
No 93
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.55 E-value=0.57 Score=33.46 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=31.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---CccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g~~~~~D~VIlA~Pa 43 (119)
.+++++++ |.++...++.|.+... ++....+|.||+|+-.
T Consensus 98 gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 98 GTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp TCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 46788888 9999999899998763 4444569999999643
No 94
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=88.25 E-value=0.62 Score=35.75 Aligned_cols=40 Identities=13% Similarity=-0.024 Sum_probs=31.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC-C--cc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN-V--KL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~-~--g~--~~~~D~VIlA~P 42 (119)
.++++++++|++|+..++++.+... + |. ...+|.||+|+.
T Consensus 224 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 4789999999999988877777653 3 43 457999999973
No 95
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=88.18 E-value=0.88 Score=34.57 Aligned_cols=40 Identities=13% Similarity=-0.074 Sum_probs=31.0
Q ss_pred ceeEEcCceeEEEEe--cCCeE-EEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEP--FNGMW-HLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~--~~~~w-~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|.. .+++. .+...+|....+|.||+++.
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCC
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 368999999999987 55554 67776665557999999985
No 96
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.07 E-value=0.74 Score=35.69 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=31.7
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCccc-cccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVKLR-GQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g~~-~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++ .+.+...+|.. ..+|.||+|+.
T Consensus 231 gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G 272 (500)
T 1onf_A 231 NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVG 272 (500)
T ss_dssp TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCC
T ss_pred CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCC
Confidence 478999999999987654 37777766654 57999999985
No 97
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=88.04 E-value=0.66 Score=34.49 Aligned_cols=48 Identities=6% Similarity=-0.061 Sum_probs=34.7
Q ss_pred ceeEEcCceeEEEEecCCeEEE--EeCCcc--ccccCEEEEcCCHH-HHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHL--SENVKL--RGQFDVVVIAHKGK-CANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l--~~~~g~--~~~~D~VIlA~Pa~-qaa~LL 50 (119)
.++|+++++|++|...++++.+ ...+|. ...+|.||.|+-.. ...+++
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~ 172 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMF 172 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHT
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhc
Confidence 4689999999999998888654 445564 45789999998644 333443
No 98
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.92 E-value=0.42 Score=34.35 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=30.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.+++++++ |..|...+++|.+.. +|....+|.||+|+-.
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGA 122 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCC
Confidence 36788887 999998888899887 4444568999999753
No 99
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=87.77 E-value=0.69 Score=35.38 Aligned_cols=40 Identities=3% Similarity=-0.083 Sum_probs=30.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC--Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN--VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~--~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++++.+... +| ....+|.||+|+.
T Consensus 230 gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 230 KMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp CCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSC
T ss_pred CcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCC
Confidence 4789999999999987777766643 34 4457999999974
No 100
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=87.68 E-value=0.8 Score=35.06 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=31.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC--Cc-cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN--VK-LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~--~g-~~~~~D~VIlA~P 42 (119)
.++++++++|.+++..+++..+... +| ....+|.||+|+.
T Consensus 235 Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G 277 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVG 277 (476)
T ss_dssp TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSC
T ss_pred CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeC
Confidence 4789999999999988877766653 23 3456999999985
No 101
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=87.05 E-value=2.1 Score=35.35 Aligned_cols=41 Identities=12% Similarity=-0.052 Sum_probs=33.3
Q ss_pred eeEEcCceeEEEEecCCeE-EEEeCCccccccCEEEEcCCHHH
Q 041088 4 FSIVRPCWISNLEPFNGMW-HLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w-~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
++|+.+++|++|+.+++++ .+.+++| ...+|.||+|+-++.
T Consensus 166 v~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 166 VTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 6789999999999888875 5777766 346899999997664
No 102
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=86.78 E-value=1 Score=35.09 Aligned_cols=40 Identities=13% Similarity=0.039 Sum_probs=31.6
Q ss_pred ceeEEcCceeEEEEe-------------------cCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEP-------------------FNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~-------------------~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+. .+++..+...+|....+|.||+|+.
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G 264 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIG 264 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcC
Confidence 468999999999987 3566777766665567999999984
No 103
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=86.74 E-value=1 Score=34.45 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=31.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.+++.+.+..+++ ...+|.||+|+.
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~~~-~i~aD~Vv~a~G 268 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTTHG-ELRADKLLVATG 268 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEETTE-EEEESEEEECSC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEECCc-EEEcCEEEECCC
Confidence 478999999999998887888877655 346899999974
No 104
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=86.65 E-value=0.73 Score=35.88 Aligned_cols=48 Identities=10% Similarity=-0.060 Sum_probs=36.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCcc---ccccCEEEEcCCHHH-HHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKL---RGQFDVVVIAHKGKC-ANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~---~~~~D~VIlA~Pa~q-aa~LL 50 (119)
.++|+++++|++|+.+++++.+...++. ...+|.||.|.-+.. ..+++
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 3689999999999999999988764432 456899999986543 34454
No 105
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.63 E-value=0.53 Score=35.03 Aligned_cols=40 Identities=3% Similarity=-0.156 Sum_probs=32.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.+++++++++..++.+++.-.+...+|....||.||+++|
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g 255 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPP 255 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCC
T ss_pred CcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecC
Confidence 4789999999999887777677777776667999999976
No 106
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=86.60 E-value=0.77 Score=35.77 Aligned_cols=48 Identities=10% Similarity=-0.089 Sum_probs=36.0
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCcc---ccccCEEEEcCCHHH-HHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKL---RGQFDVVVIAHKGKC-ANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~---~~~~D~VIlA~Pa~q-aa~LL 50 (119)
.++|+++++|++|+.+++++.+...++. ...+|.||.|.-... ..+++
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 3689999999999999999988764432 456899999976543 34444
No 107
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=86.48 E-value=0.25 Score=37.16 Aligned_cols=41 Identities=10% Similarity=0.039 Sum_probs=27.3
Q ss_pred ceeEEcCceeE---------EEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWIS---------NLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~---------~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++++++++|+ +|..++++|.+..++| ...+|.||+|+-++
T Consensus 186 Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 186 GAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp TCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred CCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 36788999999 8988888887776666 44689999999765
No 108
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=86.46 E-value=0.69 Score=32.93 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=28.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.+++++++ |..+...++.|.+ ..++....||.||+|+-
T Consensus 76 ~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG 113 (320)
T 1trb_A 76 ETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATG 113 (320)
T ss_dssp TCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCC
T ss_pred CCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCC
Confidence 35788886 8999888888988 43444456899999974
No 109
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.31 E-value=0.86 Score=35.65 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=32.1
Q ss_pred ceeEEcCceeEEEEec---CCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPF---NGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~---~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|..|.+. ++.|.+..++|....+|.||+|+-+
T Consensus 281 gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 281 DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA 324 (521)
T ss_dssp CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC
Confidence 4788999999999764 3379998877755569999999753
No 110
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=86.27 E-value=0.92 Score=34.72 Aligned_cols=40 Identities=10% Similarity=-0.054 Sum_probs=30.6
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEe-----CCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSE-----NVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~-----~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.++++ +.+.. .++....+|.||+|+.
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcC
Confidence 3789999999999987766 77663 3344457999999974
No 111
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=86.22 E-value=0.77 Score=33.93 Aligned_cols=43 Identities=9% Similarity=-0.187 Sum_probs=32.7
Q ss_pred ceeEEcCceeEEEEecC-CeEEEEe-CCcc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFN-GMWHLSE-NVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~w~l~~-~~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|+..+ +++.+.. ++|. ...+|.||.|.-...
T Consensus 117 g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 46899999999998864 5677775 4554 457999999986543
No 112
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=86.17 E-value=1 Score=34.92 Aligned_cols=39 Identities=10% Similarity=-0.035 Sum_probs=31.2
Q ss_pred eeEEcCceeEEEEecCCeEEEEeC--Cc--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSEN--VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~--~g--~~~~~D~VIlA~P 42 (119)
++++++++|.+++..+++..+... +| ....+|.||+|+.
T Consensus 229 V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATG 271 (492)
T ss_dssp SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSC
T ss_pred cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeC
Confidence 789999999999988888777652 34 4457999999985
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=86.06 E-value=0.86 Score=33.63 Aligned_cols=45 Identities=13% Similarity=-0.070 Sum_probs=32.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH-HHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK-CANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~-qaa~LL 50 (119)
.++|+++++|++|+. ++ .+...+|....+|.||.|+-.. ...+++
T Consensus 121 gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 121 GVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp TCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred CCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 468999999999987 34 7777666555799999998543 334444
No 114
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=85.81 E-value=1 Score=32.66 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=31.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCcccc-ccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRG-QFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~-~~D~VIlA~P 42 (119)
.++++++++|.+|...++++.+...+|... .+|.||+++.
T Consensus 229 ~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G 269 (369)
T 3d1c_A 229 RIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATG 269 (369)
T ss_dssp CEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCC
T ss_pred cEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeec
Confidence 388999999999987777777877666433 4699999874
No 115
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=85.81 E-value=1 Score=35.15 Aligned_cols=40 Identities=3% Similarity=0.041 Sum_probs=31.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|++|.+.++.+.+.. .+| ....||+||+|+-
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG 114 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPG 114 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCC
Confidence 467889999999999888888875 222 2456999999974
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=85.39 E-value=1.2 Score=34.08 Aligned_cols=40 Identities=8% Similarity=-0.056 Sum_probs=30.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC-Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN-VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~-~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.++++..+... +| ....+|.||+|+.
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIG 268 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSC
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCC
Confidence 3689999999999987766666642 33 4457999999973
No 117
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=85.38 E-value=0.61 Score=37.12 Aligned_cols=48 Identities=15% Similarity=-0.006 Sum_probs=37.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe--CCc-cccccCEEEEcCCHH-HHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE--NVK-LRGQFDVVVIAHKGK-CANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~--~~g-~~~~~D~VIlA~Pa~-qaa~LL 50 (119)
.++|+++++|++|+.+++++.+.. .+| ....+|.||.|.-.. ...+++
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 468999999999999999998876 566 456799999998643 344554
No 118
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=85.30 E-value=1.2 Score=31.78 Aligned_cols=42 Identities=7% Similarity=-0.130 Sum_probs=29.9
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCC-----ccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENV-----KLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~-----g~~~~~D~VIlA~Pa~ 44 (119)
.++++++++|.+|..++++. .+...+ +....+|.||+++...
T Consensus 223 gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 223 KIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp TEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 57899999999999877643 243322 2445699999998643
No 119
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=85.16 E-value=1.4 Score=33.52 Aligned_cols=39 Identities=8% Similarity=-0.014 Sum_probs=29.4
Q ss_pred ceeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|++|+..+++.. +.. +|....+|.||+|+.
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G 244 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIG 244 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCC
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcC
Confidence 478999999999987666654 444 444456999999985
No 120
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.12 E-value=0.93 Score=34.51 Aligned_cols=40 Identities=10% Similarity=-0.032 Sum_probs=30.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---CccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+++.++++..+... ++....+|.||+|+.
T Consensus 225 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G 267 (455)
T 1ebd_A 225 GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVG 267 (455)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcC
Confidence 4689999999999987777766542 234456999999984
No 121
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=85.09 E-value=0.77 Score=35.73 Aligned_cols=48 Identities=8% Similarity=-0.144 Sum_probs=35.9
Q ss_pred ceeEEcCceeEEEEecCC----eEEEEeCCc---cccccCEEEEcCCHH-HHHhhc
Q 041088 3 MFSIVRPCWISNLEPFNG----MWHLSENVK---LRGQFDVVVIAHKGK-CANRLL 50 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~----~w~l~~~~g---~~~~~D~VIlA~Pa~-qaa~LL 50 (119)
.++|+++++|++|+.+++ ++.+...++ ....+|.||.|.-.. ...++|
T Consensus 134 gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp TCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred CCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 478999999999999988 888875432 445689999998543 344444
No 122
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=85.01 E-value=0.78 Score=33.17 Aligned_cols=38 Identities=8% Similarity=-0.025 Sum_probs=28.9
Q ss_pred ceeEEcCceeEEEEecCCeEEE-EeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHL-SENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l-~~~~g~~~~~D~VIlA~P 42 (119)
.+++++++ |..|.. ++.|.+ ...+|....||.||+|+-
T Consensus 85 ~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG 123 (335)
T 2a87_A 85 GADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMG 123 (335)
T ss_dssp TCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCC
Confidence 36788887 888887 667888 766664456999999974
No 123
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=84.98 E-value=1.1 Score=34.66 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=33.0
Q ss_pred eeEEcCceeEEEEecCCeEEEEe---CCcc--ccccCEEEEcCCHHH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSE---NVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~---~~g~--~~~~D~VIlA~Pa~q 45 (119)
++|+.+++|++|..+++.|.+.. .+|. ...+|.||+|+-++.
T Consensus 164 v~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 164 GEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 67899999999998887788875 2342 456899999997663
No 124
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=84.98 E-value=1.4 Score=31.03 Aligned_cols=40 Identities=8% Similarity=-0.068 Sum_probs=29.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---Ccc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g~--~~~~D~VIlA~P 42 (119)
.++++++++|.++..+++...+... +|. ...+|.||+++.
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 5789999999999887554445432 242 457999999975
No 125
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=84.71 E-value=0.95 Score=34.67 Aligned_cols=39 Identities=10% Similarity=0.023 Sum_probs=30.8
Q ss_pred eeEEcCceeEEEEecC-CeEEEEeC--Ccc--ccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFN-GMWHLSEN--VKL--RGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~-~~w~l~~~--~g~--~~~~D~VIlA~P 42 (119)
++++++++|.+|+..+ ++..+... +|. ...+|.||+|+.
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCC
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcC
Confidence 6789999999999877 77777665 443 457899999985
No 126
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=84.66 E-value=1.4 Score=33.97 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=31.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCcc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g~--~~~~D~VIlA~P 42 (119)
.++++++++|..|...++.+.+.. .+|. ...||.||+|+-
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCC
Confidence 467889999999998888888875 3343 456999999974
No 127
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=84.61 E-value=1 Score=34.44 Aligned_cols=40 Identities=5% Similarity=-0.038 Sum_probs=30.1
Q ss_pred ceeEEcCceeEEEEe--cCCeEEEEeC-----CccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEP--FNGMWHLSEN-----VKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~--~~~~w~l~~~-----~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|.. .++.+.+... ++....+|.||+|+.
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 284 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVG 284 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCC
Confidence 478999999999987 5666766543 234457999999984
No 128
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=84.26 E-value=1.4 Score=32.19 Aligned_cols=40 Identities=15% Similarity=-0.017 Sum_probs=32.3
Q ss_pred eEEcCceeEEEEecCC-eEEEEeCCccccccCEEEEcCCHH
Q 041088 5 SIVRPCWISNLEPFNG-MWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 5 ~i~~~~~V~~i~~~~~-~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.|+++++|++++..++ ++.+.+.+|....+|.||-|.-..
T Consensus 125 ~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 125 TIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp TEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred eEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCC
Confidence 5899999999987654 688988888666799999997543
No 129
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=84.26 E-value=0.63 Score=34.84 Aligned_cols=40 Identities=15% Similarity=-0.082 Sum_probs=31.1
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCC---c--cccccCEEEEcCCHH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENV---K--LRGQFDVVVIAHKGK 44 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~---g--~~~~~D~VIlA~Pa~ 44 (119)
++|+++++|++|+. +++|.+...+ | ....+|.||.|.-..
T Consensus 124 ~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~ 168 (410)
T 3c96_A 124 QAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIH 168 (410)
T ss_dssp TSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTT
T ss_pred cEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCcc
Confidence 47999999999998 7788876543 4 345689999998653
No 130
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=83.83 E-value=1.1 Score=34.63 Aligned_cols=40 Identities=5% Similarity=-0.034 Sum_probs=30.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEE-eCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLS-ENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~-~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|..|...++.+.+. ..++....||.||+|+-
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG 146 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATG 146 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCC
Confidence 36788999999999888888876 32233456999999974
No 131
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=83.32 E-value=1.2 Score=34.19 Aligned_cols=40 Identities=10% Similarity=-0.098 Sum_probs=31.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+++..+++..+... +| ....+|.||+|+.
T Consensus 253 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 253 GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 4789999999999988888776543 13 3456999999974
No 132
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=83.30 E-value=1.7 Score=32.73 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=28.0
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+ ++ .+...+|....+|.||+++.
T Consensus 201 GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 201 GVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp TCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSC
T ss_pred CcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcC
Confidence 47899999999998 33 56666665557999999985
No 133
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=83.27 E-value=1 Score=33.68 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=27.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|++|+.+ + +...+|....+|.||++++
T Consensus 232 gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G 267 (409)
T 3h8l_A 232 GIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPP 267 (409)
T ss_dssp TCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECC
T ss_pred CCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCC
Confidence 4789999999999643 3 5555565567999999985
No 134
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=83.21 E-value=1.1 Score=31.86 Aligned_cols=41 Identities=12% Similarity=-0.003 Sum_probs=29.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---C--ccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---V--KLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~--g~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|...++...+... + +....+|.||+++..
T Consensus 203 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 203 KVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp SCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred CeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 4789999999999877654444332 2 234569999999863
No 135
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=83.21 E-value=1.8 Score=34.01 Aligned_cols=42 Identities=7% Similarity=-0.151 Sum_probs=32.2
Q ss_pred ceeEEcCceeEEEEecCCe--EEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM--WHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~--w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++++++ +|++|...+++ +.|...+|....+|.||.|+-...
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4789999 99999886655 567776665456999999986544
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=83.16 E-value=1.9 Score=32.80 Aligned_cols=40 Identities=8% Similarity=0.092 Sum_probs=30.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC-CccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN-VKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~-~g~~~~~D~VIlA~P 42 (119)
.++++++++|++|...++.|.+... ++....||.||+|+-
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG 112 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATG 112 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCC
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCC
Confidence 4678899999999998888888532 334456999999964
No 137
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.12 E-value=2.4 Score=30.00 Aligned_cols=42 Identities=2% Similarity=-0.237 Sum_probs=29.4
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCC----c--cccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENV----K--LRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~----g--~~~~~D~VIlA~Pa~ 44 (119)
.++++++++|.+|..++++. .+...+ | ....+|.||+|+...
T Consensus 198 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 198 NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 57899999999998776442 243321 2 345799999998643
No 138
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=82.99 E-value=2.4 Score=30.78 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=28.7
Q ss_pred eeEEcCceeEEEEecCCeE-EEEe--CCc--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMW-HLSE--NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w-~l~~--~~g--~~~~~D~VIlA~P 42 (119)
++++++++|.+|..++++. .+.. .+| ....+|.||+++.
T Consensus 217 v~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 217 IDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp EEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCC
T ss_pred eEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCC
Confidence 7899999999998876642 3333 244 3457999999986
No 139
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=82.95 E-value=1.6 Score=33.82 Aligned_cols=42 Identities=5% Similarity=-0.099 Sum_probs=32.0
Q ss_pred ceeEEcCceeEEEEecCCe---EEEEeCCcc--ccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM---WHLSENVKL--RGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~---w~l~~~~g~--~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++ +.+...+|. ...+|.||.|+-..
T Consensus 125 Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 125 GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 4789999999999998875 455555552 45689999998654
No 140
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.80 E-value=1.8 Score=34.32 Aligned_cols=39 Identities=13% Similarity=0.017 Sum_probs=32.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAH 41 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~ 41 (119)
-+++++++.|.+++..+++..+...++....+|.|++|+
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAv 315 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAI 315 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECS
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcc
Confidence 367899999999999999988887666444689999997
No 141
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=82.77 E-value=1.4 Score=34.17 Aligned_cols=40 Identities=10% Similarity=0.015 Sum_probs=30.7
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|..+++...+...+|....+|.||+++.
T Consensus 271 GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G 310 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADG 310 (493)
T ss_dssp TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCC
T ss_pred CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCC
Confidence 3689999999999876554556666665557999999985
No 142
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=82.64 E-value=1.7 Score=33.21 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=30.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.++.+.+.. .+| ....||.||+|+-
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG 122 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALG 122 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCC
Confidence 456789999999999888888875 223 2456999999974
No 143
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=82.42 E-value=1.7 Score=33.74 Aligned_cols=49 Identities=8% Similarity=0.048 Sum_probs=34.8
Q ss_pred ceeEEcCceeEEEEecC-CeE--EEEe--CCc-----cccccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPCWISNLEPFN-GMW--HLSE--NVK-----LRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~w--~l~~--~~g-----~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
+++|+++++|++|..++ ++. .+.. .+| ....++.||+|+-+..+.+||-
T Consensus 236 n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp SEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 68999999999999875 322 2332 233 2345789999999887777653
No 144
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=82.41 E-value=1.5 Score=34.01 Aligned_cols=43 Identities=26% Similarity=0.299 Sum_probs=32.2
Q ss_pred ceeEEcCceeEEEEec---CCeEEEEe--C-Cc--cccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPF---NGMWHLSE--N-VK--LRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~---~~~w~l~~--~-~g--~~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|... +++|.+.. . +| ....+|.||+|+-...
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 4789999999999874 35688765 3 45 3457999999986543
No 145
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=82.40 E-value=1.8 Score=32.80 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=28.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.+. .+...+|....||.||+|+-
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG 111 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATG 111 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCC
Confidence 468899999999987654 45555554456999999973
No 146
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=82.38 E-value=1.6 Score=32.74 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=28.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.+. .+...+|....||+||+|+-
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG 108 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATG 108 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccC
Confidence 468899999999987655 45555554556999999974
No 147
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=82.25 E-value=2 Score=33.52 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=35.0
Q ss_pred ceeEEcCceeEEEEecC-Ce--EEEEe-C-Cc-----cccccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPCWISNLEPFN-GM--WHLSE-N-VK-----LRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~--w~l~~-~-~g-----~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
+++|+++++|++|..++ ++ ..+.. + +| ....++.||+|+-+..+.+||-
T Consensus 241 n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~ 299 (507)
T 1coy_A 241 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLV 299 (507)
T ss_dssp CEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHH
Confidence 68999999999999876 32 23333 1 33 2345789999999888877763
No 148
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=82.18 E-value=1.9 Score=32.75 Aligned_cols=43 Identities=14% Similarity=-0.183 Sum_probs=31.6
Q ss_pred ceeEEcCceeEEEEecCCeEE-EE--eC-Ccc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LS--EN-VKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~--~~-~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|+++..+++++. +. .. +|. ...+|.||.|+-...
T Consensus 114 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 478999999999998887753 43 32 442 457999999986554
No 149
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=81.84 E-value=2.2 Score=32.79 Aligned_cols=42 Identities=7% Similarity=-0.228 Sum_probs=32.1
Q ss_pred ceeEEcCceeEEEEecCCe--EEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM--WHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~--w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++++++ +|++|..++++ +.|...+|....+|.||.|+-...
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 3678999 99999886665 667776664456999999987653
No 150
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=81.83 E-value=2.1 Score=30.54 Aligned_cols=39 Identities=10% Similarity=0.040 Sum_probs=29.7
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.+++++ .+|..+...++.|.+..+++ ...+|.||+|+-+
T Consensus 86 ~v~~~~-~~v~~i~~~~~~~~v~~~~~-~~~~~~li~AtG~ 124 (319)
T 3cty_A 86 AKIREG-VEVRSIKKTQGGFDIETNDD-TYHAKYVIITTGT 124 (319)
T ss_dssp SEEEET-CCEEEEEEETTEEEEEESSS-EEEEEEEEECCCE
T ss_pred CCEEEE-eeEEEEEEeCCEEEEEECCC-EEEeCEEEECCCC
Confidence 356777 68999998888898877544 3468999999753
No 151
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=81.77 E-value=1.6 Score=34.40 Aligned_cols=43 Identities=12% Similarity=-0.128 Sum_probs=30.4
Q ss_pred ceeEEcCceeEEEEecC-Ce---EEEEeCCcc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFN-GM---WHLSENVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~---w~l~~~~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|..++ ++ +.+...+|. ...+|.||+|+-...
T Consensus 264 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp TCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred CCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 47899999999999877 54 344433442 346899999986443
No 152
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=81.69 E-value=2.2 Score=33.58 Aligned_cols=41 Identities=15% Similarity=0.011 Sum_probs=29.5
Q ss_pred ceeEEcCceeEEEEecC-Ce---EEEEeCCcc--ccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFN-GM---WHLSENVKL--RGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~---w~l~~~~g~--~~~~D~VIlA~Pa 43 (119)
.++|+++++|++|..++ ++ +.+...+|. ...+|.||+|+-.
T Consensus 269 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 269 NIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp TCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 47899999999999876 54 334432442 4568999999865
No 153
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.68 E-value=1.2 Score=33.85 Aligned_cols=40 Identities=10% Similarity=-0.023 Sum_probs=30.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+.++++..+... +| ....+|.||+|+.
T Consensus 232 gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCC
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCC
Confidence 4689999999999887766766542 23 4457999999974
No 154
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=81.58 E-value=2.5 Score=29.71 Aligned_cols=42 Identities=0% Similarity=-0.220 Sum_probs=30.2
Q ss_pred ceeEEcCceeEEEEecCCe---EEEEeCCcc--ccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM---WHLSENVKL--RGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~---w~l~~~~g~--~~~~D~VIlA~Pa~ 44 (119)
.++++++++|.+|...+++ ..+...+|. ...+|.||+++...
T Consensus 197 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 197 KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 5789999999999887754 333333452 55799999998643
No 155
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=81.28 E-value=1.4 Score=33.23 Aligned_cols=38 Identities=8% Similarity=0.036 Sum_probs=28.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.+ +.+...+|....||.||+|+-
T Consensus 73 ~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG 110 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATG 110 (408)
T ss_dssp SCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCC
T ss_pred CCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCC
Confidence 46789999999998754 456655554456999999974
No 156
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=81.25 E-value=2.7 Score=32.32 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=39.1
Q ss_pred cceeEEcCceeEEEEecCCe---EEEEeCCc-cccccCEEEEcCCHHHHHhhcCCC
Q 041088 2 SMFSIVRPCWISNLEPFNGM---WHLSENVK-LRGQFDVVVIAHKGKCANRLLGSS 53 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~~~~---w~l~~~~g-~~~~~D~VIlA~Pa~qaa~LL~~~ 53 (119)
.++.|.+++.|.+|..++++ ..+...++ ....++.|||+.-+-.+.+||-.+
T Consensus 224 ~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~S 279 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRS 279 (526)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhc
Confidence 57899999999999988765 33334444 344579999999998888887543
No 157
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.24 E-value=1.2 Score=33.04 Aligned_cols=37 Identities=14% Similarity=-0.050 Sum_probs=26.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.+ +.|. .+|....||.||+||-
T Consensus 74 ~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATG 110 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATG 110 (367)
T ss_dssp TEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCC
T ss_pred CcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCC
Confidence 46788999999997654 4555 3444456999999974
No 158
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=80.99 E-value=1.5 Score=34.05 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=28.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAH 41 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~ 41 (119)
.++++++++|.+|...+. .|...+|....||+||+||
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviAT 140 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIAT 140 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECC
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECC
Confidence 467889999999987654 5655566555699999997
No 159
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=80.39 E-value=2.6 Score=33.30 Aligned_cols=41 Identities=20% Similarity=0.019 Sum_probs=28.4
Q ss_pred ceeEEcCceeEEEEecC-Ce---EEEEeCCcc--ccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFN-GM---WHLSENVKL--RGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~---w~l~~~~g~--~~~~D~VIlA~Pa 43 (119)
.++|+++++|++|..++ ++ +.+...+|. ...+|.||+|+-.
T Consensus 269 gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 269 GTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp TCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 47899999999998766 53 333332442 3468999999864
No 160
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=80.26 E-value=2.1 Score=33.87 Aligned_cols=41 Identities=5% Similarity=-0.144 Sum_probs=30.8
Q ss_pred eeEEcCceeEEEEecCCe-EEEEe----CCc-cccccCEEEEcCCHH
Q 041088 4 FSIVRPCWISNLEPFNGM-WHLSE----NVK-LRGQFDVVVIAHKGK 44 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~-w~l~~----~~g-~~~~~D~VIlA~Pa~ 44 (119)
++|+.+++|++|.+++++ |.+.. .++ ....+|.||+|+-++
T Consensus 203 a~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 203 AYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp CEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred CeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 678999999999988776 55653 222 245689999999776
No 161
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=80.23 E-value=1.5 Score=31.39 Aligned_cols=39 Identities=5% Similarity=-0.132 Sum_probs=28.0
Q ss_pred eeEEcCceeEEEEec--CCe-EEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPF--NGM-WHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~--~~~-w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
+++++ .+|..|... +++ |.+...+|....||.||+|+-.
T Consensus 80 v~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 80 AKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp CEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred CEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 45666 588999877 554 8876655545569999999753
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=80.17 E-value=2.5 Score=33.31 Aligned_cols=40 Identities=8% Similarity=0.122 Sum_probs=31.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCcc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g~--~~~~D~VIlA~P 42 (119)
.++++++++|++|...++.+.+.. .+|. ...||.||+|+-
T Consensus 107 gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (588)
T 3ics_A 107 NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPG 149 (588)
T ss_dssp TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCC
Confidence 467889999999999888888875 3332 446999999974
No 163
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=79.23 E-value=2.3 Score=33.42 Aligned_cols=38 Identities=16% Similarity=0.045 Sum_probs=29.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..+++ +...+|....+|.||+|+.
T Consensus 242 GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G 279 (588)
T 3ics_A 242 DVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIG 279 (588)
T ss_dssp TCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSC
T ss_pred CCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccC
Confidence 4689999999999876665 4445554556999999985
No 164
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=79.21 E-value=3.2 Score=29.61 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=28.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---Cc--cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VK--LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g--~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|..+++...+... +| ....+|.||+++..
T Consensus 205 gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 5789999999999885442234332 34 44579999999863
No 165
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=79.10 E-value=3.7 Score=29.23 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=27.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe---CCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE---NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~---~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|..++....+.. .+| ....+|.||+++.
T Consensus 202 gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 578999999999987543223433 234 2457999999985
No 166
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=78.11 E-value=4.2 Score=28.66 Aligned_cols=41 Identities=10% Similarity=-0.074 Sum_probs=28.9
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeC---Ccc--ccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSEN---VKL--RGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~---~g~--~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|..++++. .+... +|. ...+|.||+++..
T Consensus 193 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp TEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 57899999999998775542 33332 342 4579999999853
No 167
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=78.09 E-value=1.8 Score=33.98 Aligned_cols=45 Identities=7% Similarity=0.005 Sum_probs=33.5
Q ss_pred EEcCceeEEEEecCCeEEEEeCC---c--cccccCEEEEcCCHHH-HHhhc
Q 041088 6 IVRPCWISNLEPFNGMWHLSENV---K--LRGQFDVVVIAHKGKC-ANRLL 50 (119)
Q Consensus 6 i~~~~~V~~i~~~~~~w~l~~~~---g--~~~~~D~VIlA~Pa~q-aa~LL 50 (119)
|+++++|++|+.++++|.+...+ | ....+|.||.|.-... ..+++
T Consensus 152 v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 89999999999999998876532 4 3456899999986543 44444
No 168
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=77.93 E-value=3.8 Score=31.90 Aligned_cols=42 Identities=10% Similarity=-0.122 Sum_probs=31.7
Q ss_pred ceeEEcCceeEEEEecCCe--EEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM--WHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~--w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++++.+ +|++|...+++ +.+...+|....+|.||.|+-...
T Consensus 179 gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 179 GVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred CCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 3678888 89999886655 567776664457999999987653
No 169
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.83 E-value=2.6 Score=32.19 Aligned_cols=38 Identities=16% Similarity=0.075 Sum_probs=28.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+. + ++.+..++| ....+|.||+|+.
T Consensus 226 gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G 265 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVG 265 (458)
T ss_dssp TCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCC
T ss_pred CCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcC
Confidence 468999999999987 4 366654334 4557999999985
No 170
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=77.76 E-value=2.3 Score=32.28 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=28.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc-cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK-LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g-~~~~~D~VIlA~P 42 (119)
.++++++++|..+.. +.+.+..+++ ....||.||+|+-
T Consensus 73 gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG 111 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANG 111 (449)
T ss_dssp TCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCC
T ss_pred CcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCC
Confidence 468899999998864 3477776665 3557999999974
No 171
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=77.33 E-value=3.5 Score=31.45 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=29.5
Q ss_pred ceeEEcCceeEEEEecCCe--EEEEeCC-------ccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGM--WHLSENV-------KLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~--w~l~~~~-------g~~~~~D~VIlA~P 42 (119)
.++++++++|.+++..+++ ..+...+ |....+|.||+|+.
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G 290 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIG 290 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeec
Confidence 4789999999999887665 5555532 13456999999975
No 172
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=77.14 E-value=3.9 Score=31.34 Aligned_cols=40 Identities=8% Similarity=0.016 Sum_probs=29.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|..+++.+.+..+++ ...+|.||+|+..
T Consensus 241 Gv~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 241 HIEILTNENVKAFKGNERVEAVETDKG-TYKADLVLVSVGV 280 (480)
T ss_dssp TCEEECSCCEEEEEESSBEEEEEETTE-EEECSEEEECSCE
T ss_pred CcEEEcCCEEEEEEcCCcEEEEEECCC-EEEcCEEEECcCC
Confidence 468999999999987643445666554 4468999999853
No 173
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=76.79 E-value=3.2 Score=32.19 Aligned_cols=43 Identities=14% Similarity=-0.061 Sum_probs=29.3
Q ss_pred ceeEEcCceeEEEEec-CCeE---EEEeCCc-cccccC-EEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPF-NGMW---HLSENVK-LRGQFD-VVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~-~~~w---~l~~~~g-~~~~~D-~VIlA~Pa~q 45 (119)
.++|+++++|++|..+ +++. .+..+++ ....+| .||+|+-...
T Consensus 216 Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 216 GVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 4789999999999987 4432 3333333 234686 9999986543
No 174
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=76.64 E-value=2.9 Score=33.43 Aligned_cols=42 Identities=10% Similarity=-0.021 Sum_probs=32.2
Q ss_pred ceeEEcCceeEEEEec-CCeEEEEeC-Cc--cccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPF-NGMWHLSEN-VK--LRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~-~~~w~l~~~-~g--~~~~~D~VIlA~Pa~ 44 (119)
.++++++++|++|... ++.|.|... +| ....+|.||.|+-..
T Consensus 142 Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 142 GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 4689999999999876 556888764 44 345689999998543
No 175
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=76.58 E-value=2.6 Score=32.29 Aligned_cols=40 Identities=13% Similarity=0.033 Sum_probs=28.5
Q ss_pred ceeEEcCceeEEEEecCC-eEEEEeCCc-----cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNG-MWHLSENVK-----LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~-~w~l~~~~g-----~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..++ ...+...++ ....+|.||+|+.
T Consensus 241 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcc
Confidence 468999999999988654 355554322 2456999999974
No 176
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=75.72 E-value=2.4 Score=32.99 Aligned_cols=39 Identities=13% Similarity=-0.001 Sum_probs=28.6
Q ss_pred eeEEcCceeEEEEecC--------CeEEEEeCC---c--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFN--------GMWHLSENV---K--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~--------~~w~l~~~~---g--~~~~~D~VIlA~P 42 (119)
..|+++++|+++++.+ +.|+|...+ | ....++.||+|+.
T Consensus 160 ~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 160 DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred CceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 3589999999998754 249887632 2 2345899999986
No 177
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=75.72 E-value=4 Score=30.86 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=30.0
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCcc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g~--~~~~D~VIlA~P 42 (119)
.++++++++|..|...++.+.+.. .+|. ...||.||+|+-
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPG 112 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCC
Confidence 367888999999988888777765 3332 246999999973
No 178
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=75.59 E-value=2.4 Score=33.56 Aligned_cols=42 Identities=10% Similarity=-0.199 Sum_probs=30.9
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeC---Cc--cccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSEN---VK--LRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~---~g--~~~~~D~VIlA~Pa~ 44 (119)
-++|+++++|++|...+++ |.+... +| ....+|.||+|+-++
T Consensus 184 G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 184 GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 3678999999999998876 456542 12 344689999999755
No 179
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.57 E-value=3.8 Score=30.94 Aligned_cols=38 Identities=13% Similarity=0.219 Sum_probs=27.0
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++.+ +|++|.++++. |.+++|....||.+|+|+-+
T Consensus 70 gv~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp TEEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCC
T ss_pred CcEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCC
Confidence 3556555 68889887764 55556655579999999864
No 180
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=75.37 E-value=5.6 Score=28.19 Aligned_cols=41 Identities=7% Similarity=-0.141 Sum_probs=28.6
Q ss_pred ceeEEcCceeEEEEecCC---eEEEEe-CCcc--ccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNG---MWHLSE-NVKL--RGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~---~w~l~~-~~g~--~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|..+++ +..+.. .+|. ...+|.||+|+..
T Consensus 204 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 204 NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 467899999999987765 233432 2342 4579999999853
No 181
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=75.35 E-value=3.1 Score=31.15 Aligned_cols=38 Identities=8% Similarity=0.032 Sum_probs=28.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|+.|.+.+. .+...+|....||+||+|+-
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG 116 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATG 116 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCC
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccC
Confidence 467899999999987654 45555554556999999973
No 182
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=74.94 E-value=5.2 Score=31.46 Aligned_cols=51 Identities=14% Similarity=-0.032 Sum_probs=35.8
Q ss_pred cceeEEcCceeEEEEecC-Ce-EEEEe-CC--c--cccccC-EEEEcCCHHHHHhhcCC
Q 041088 2 SMFSIVRPCWISNLEPFN-GM-WHLSE-NV--K--LRGQFD-VVVIAHKGKCANRLLGS 52 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~~-~~-w~l~~-~~--g--~~~~~D-~VIlA~Pa~qaa~LL~~ 52 (119)
.+++|++++.|++|..++ ++ ..+.. ++ | ....++ .||+|+-+..+.+||..
T Consensus 222 ~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~ 280 (546)
T 2jbv_A 222 ENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLML 280 (546)
T ss_dssp TTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhh
Confidence 468999999999999876 43 23432 22 3 234577 99999988777777643
No 183
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=74.64 E-value=3.6 Score=31.09 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=28.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|...+..+.+..+++ ...+|.||+|+.
T Consensus 205 gv~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~d~vi~a~G 243 (447)
T 1nhp_A 205 NITIATGETVERYEGDGRVQKVVTDKN-AYDADLVVVAVG 243 (447)
T ss_dssp TEEEEESCCEEEEECSSBCCEEEESSC-EEECSEEEECSC
T ss_pred CCEEEcCCEEEEEEccCcEEEEEECCC-EEECCEEEECcC
Confidence 478999999999987633345655543 446899999985
No 184
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=74.50 E-value=3.8 Score=31.06 Aligned_cols=40 Identities=8% Similarity=0.138 Sum_probs=30.2
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC--C-ccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN--V-KLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~--~-g~~~~~D~VIlA~P 42 (119)
.++++++++|..|...++.+.+... + +....||.||+|+-
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccC
Confidence 3678889999999888888887641 2 33456999999974
No 185
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=73.82 E-value=6.6 Score=30.58 Aligned_cols=50 Identities=14% Similarity=0.056 Sum_probs=35.4
Q ss_pred cceeEEcCceeEEEEecCCeE-EEEeC---Ccc--cc---ccCEEEEcCCHHHHHhhcC
Q 041088 2 SMFSIVRPCWISNLEPFNGMW-HLSEN---VKL--RG---QFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~~~~w-~l~~~---~g~--~~---~~D~VIlA~Pa~qaa~LL~ 51 (119)
.+++|++++.|++|..++++. .+... +|. .. .++.||+|+-+....+||.
T Consensus 209 ~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~ 267 (546)
T 1kdg_A 209 PNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILF 267 (546)
T ss_dssp TTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHH
Confidence 478999999999999876642 34332 242 12 5799999998877766654
No 186
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.46 E-value=2.6 Score=29.57 Aligned_cols=37 Identities=8% Similarity=0.058 Sum_probs=27.0
Q ss_pred ceeEEcCceeEEEEecC--CeEEE--EeCCccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFN--GMWHL--SENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~--~~w~l--~~~~g~~~~~D~VIlA~Pa 43 (119)
.++++++ +|.++ .++ +.|.+ ..++ ...||.||+|+-.
T Consensus 76 ~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 76 GLKHEMV-GVEQI-LKNSDGSFTIKLEGGK--TELAKAVIVCTGS 116 (315)
T ss_dssp CCEEECC-CEEEE-EECTTSCEEEEETTSC--EEEEEEEEECCCE
T ss_pred CcEEEEE-EEEEE-ecCCCCcEEEEEecCC--EEEeCEEEEeeCC
Confidence 3567787 88889 777 78994 4333 4569999999753
No 187
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=73.38 E-value=5.2 Score=28.36 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=22.6
Q ss_pred ceeEEEEe-cCCeEEEEeCCccccccCEEEEcCC
Q 041088 10 CWISNLEP-FNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 10 ~~V~~i~~-~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
..+..+.. .++.+.+...+|....+|+||+||-
T Consensus 81 ~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATG 114 (304)
T 4fk1_A 81 KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATG 114 (304)
T ss_dssp CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCC
T ss_pred eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccC
Confidence 34445544 4456888877775557899999974
No 188
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=71.64 E-value=6.7 Score=31.46 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=33.4
Q ss_pred ceeEEcCceeEEEEecCC--e---EEEEe-CCc--cccccCEEEEcCCHHHHHhhcC
Q 041088 3 MFSIVRPCWISNLEPFNG--M---WHLSE-NVK--LRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~--~---w~l~~-~~g--~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
+++|++++.|++|..+++ + ..+.. .+| ....+|.||+++-+....+||.
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 689999999999988653 2 23332 233 2456899999987666555543
No 189
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=71.46 E-value=5.1 Score=31.06 Aligned_cols=42 Identities=10% Similarity=-0.083 Sum_probs=30.8
Q ss_pred ceeEEcCceeEEEEecCCeE--EEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW--HLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w--~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++++++ +|++|..+++++ .+...+|....+|.||.|+-...
T Consensus 190 Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 190 GVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred CCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 4688999 599998876654 56665553456999999987653
No 190
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=71.04 E-value=4.8 Score=30.56 Aligned_cols=41 Identities=2% Similarity=0.063 Sum_probs=29.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC---CccccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN---VKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~---~g~~~~~D~VIlA~Pa 43 (119)
.++++++++|+.|........+... ++....||.||+||-+
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC
Confidence 3578889999999888877666542 2234469999999753
No 191
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=70.49 E-value=5.7 Score=32.38 Aligned_cols=41 Identities=12% Similarity=0.038 Sum_probs=31.0
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
+++| ++++|+.|..+++++ .|...+|....+|.||+|+-..
T Consensus 138 GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp TEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred CCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 5677 578999998877764 5777666555689999998764
No 192
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=70.18 E-value=6.4 Score=29.30 Aligned_cols=37 Identities=8% Similarity=0.063 Sum_probs=26.9
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.+++++ ++|+.|.+.+.. +...+|....||+||+|+-
T Consensus 71 ~i~~~~-~~v~~id~~~~~--v~~~~g~~~~~d~lvlAtG 107 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGRK--LLLASGTAIEYGHLVLATG 107 (404)
T ss_dssp TEEEEC-CCEEEEETTTTE--EEESSSCEEECSEEEECCC
T ss_pred CCEEEE-EEEEEEECCCCE--EEECCCCEEECCEEEEeeC
Confidence 467777 899999877664 4444554456999999974
No 193
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=69.78 E-value=5.8 Score=28.13 Aligned_cols=41 Identities=10% Similarity=-0.073 Sum_probs=28.8
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeC---------C---c--cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSEN---------V---K--LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~---------~---g--~~~~~D~VIlA~Pa 43 (119)
.++++++++|++|..++++. .+... + + ....+|.||+|+-.
T Consensus 134 gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 134 NVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp TEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred CCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 57899999999999877653 23221 1 1 33468999999873
No 194
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=69.49 E-value=10 Score=26.86 Aligned_cols=41 Identities=2% Similarity=-0.104 Sum_probs=29.0
Q ss_pred ceeEEcCceeEEEEecCC--e---EEEEe-CCc--cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNG--M---WHLSE-NVK--LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~--~---w~l~~-~~g--~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|...++ + ..+.. .+| ....+|.||+++..
T Consensus 209 gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 209 KIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp TEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 578999999999987764 3 34442 123 34579999999864
No 195
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.77 E-value=6 Score=30.40 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=27.3
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|.. +++. .+..+ |....+|.||+|+.
T Consensus 250 GV~i~~~~~v~~i~~-~~~v~~v~~~-g~~i~~D~Vi~a~G 288 (490)
T 2bc0_A 250 GIQLAFGETVKEVAG-NGKVEKIITD-KNEYDVDMVILAVG 288 (490)
T ss_dssp TCEEEETCCEEEEEC-SSSCCEEEES-SCEEECSEEEECCC
T ss_pred CeEEEeCCEEEEEEc-CCcEEEEEEC-CcEEECCEEEECCC
Confidence 478999999999986 3333 34444 44456999999984
No 196
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=68.67 E-value=11 Score=26.46 Aligned_cols=40 Identities=3% Similarity=-0.071 Sum_probs=28.3
Q ss_pred ceeEEcCceeEEEEecCCeE---EEEe-CCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMW---HLSE-NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w---~l~~-~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|.+|..++++. .+.. .+| ....+|.||+++.
T Consensus 194 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 194 NVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp TEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 57899999999998766543 3332 223 2456999999975
No 197
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=68.51 E-value=4.2 Score=31.99 Aligned_cols=37 Identities=16% Similarity=0.043 Sum_probs=25.7
Q ss_pred ceeEEc--CceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 3 MFSIVR--PCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~--~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
++++.. +..|++|+. ++ +.+.+|...++|.||+||--
T Consensus 344 nV~lv~~~~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf 382 (540)
T 3gwf_A 344 NVEAVAIKENPIREVTA--KG--VVTEDGVLHELDVLVFATGF 382 (540)
T ss_dssp TEEEEETTTSCEEEECS--SE--EEETTCCEEECSEEEECCCB
T ss_pred CEEEEeCCCCCccEEec--Ce--EEcCCCCEEECCEEEECCcc
Confidence 456664 678888864 33 55566765579999999864
No 198
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=67.47 E-value=5.4 Score=27.62 Aligned_cols=36 Identities=6% Similarity=-0.095 Sum_probs=25.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++. ++|.+|..++ .+...+|....+|.||+++.
T Consensus 188 gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G 223 (297)
T 3fbs_A 188 GVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPK 223 (297)
T ss_dssp TCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCE
T ss_pred CcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccC
Confidence 356774 8888887543 56666665557999999985
No 199
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=66.55 E-value=8.1 Score=30.84 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=31.1
Q ss_pred ceeEEcCceeEEEEecCCe---EEEE-eCCcc--ccccCEEEEcCCHHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM---WHLS-ENVKL--RGQFDVVVIAHKGKCA 46 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~---w~l~-~~~g~--~~~~D~VIlA~Pa~qa 46 (119)
+++|++++.|.+|..++++ ..+. ..+|. ...++.||+|+-....
T Consensus 149 nv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 149 QIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp TEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred CcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 4889999999999887764 2232 24453 4568999999876543
No 200
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=66.51 E-value=6.7 Score=28.09 Aligned_cols=41 Identities=7% Similarity=-0.044 Sum_probs=28.7
Q ss_pred ceeEEcCceeEEEEecCC--eEEEEe-CCc--cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNG--MWHLSE-NVK--LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~--~w~l~~-~~g--~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|..+++ +..+.. .+| ....+|.||+++..
T Consensus 205 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 205 KIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp TEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred CcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 578999999999987653 244442 123 34579999999863
No 201
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=65.65 E-value=6.1 Score=32.26 Aligned_cols=41 Identities=15% Similarity=-0.036 Sum_probs=30.5
Q ss_pred ceeEEcCceeEEEEecCCe-EEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-WHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
.++| ++++|+.|..++++ +.|...+|....+|.||+|+-..
T Consensus 139 GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 5677 56799999887765 46777666445689999998754
No 202
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=64.17 E-value=3.8 Score=33.09 Aligned_cols=40 Identities=10% Similarity=-0.029 Sum_probs=26.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEE-eCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLS-ENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~-~~~g~~~~~D~VIlA~P 42 (119)
.++|+++++|.+|+.++...... ..++....+|.||+|+.
T Consensus 581 GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G 621 (690)
T 3k30_A 581 GVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTA 621 (690)
T ss_dssp TCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESC
T ss_pred CCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCC
Confidence 47899999999997543222222 22344556999999985
No 203
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=64.01 E-value=5 Score=30.32 Aligned_cols=38 Identities=8% Similarity=0.041 Sum_probs=26.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
++++++++|.+++..+....+..+++ ...+|.||+|+.
T Consensus 204 v~i~~~~~v~~i~~~~~v~~v~~~g~-~i~~D~Vv~a~G 241 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEERVEKVVTDAG-EYKAELVILATG 241 (449)
T ss_dssp SEEEESCCEEEEECSSSCCEEEETTE-EEECSEEEECSC
T ss_pred cEEEeCCeEEEEeccCcEEEEEeCCC-EEECCEEEEeeC
Confidence 68899999999986552223344433 446999999974
No 204
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=63.94 E-value=12 Score=29.22 Aligned_cols=51 Identities=8% Similarity=-0.077 Sum_probs=35.5
Q ss_pred cceeEEcCceeEEEEecCC---e-EEEEe--CCcc--cc---ccCEEEEcCCHHHHHhhcCC
Q 041088 2 SMFSIVRPCWISNLEPFNG---M-WHLSE--NVKL--RG---QFDVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~~~---~-w~l~~--~~g~--~~---~~D~VIlA~Pa~qaa~LL~~ 52 (119)
.+++|+++++|++|..+++ + ..+.. .+|. .. ..+.||+|+-+....+||..
T Consensus 207 ~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~ 268 (536)
T 1ju2_A 207 NNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL 268 (536)
T ss_dssp TTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred CCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH
Confidence 4689999999999988763 2 23433 2342 22 35899999998888777654
No 205
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=63.54 E-value=7.6 Score=31.63 Aligned_cols=41 Identities=7% Similarity=0.021 Sum_probs=30.1
Q ss_pred ceeEEcCceeEEEEecCCeEE-EEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGMWH-LSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~-l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
+++|. +..|+.|..+++++. |...+|....+|.||+|+-..
T Consensus 132 GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 132 NIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 56774 558999988777765 766666555689999998754
No 206
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=63.12 E-value=7.1 Score=30.73 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=26.3
Q ss_pred ceeEEc--CceeEEEEecCCeEEEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVR--PCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~--~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
+++++. +++|++|+. ++ +.+.+| ...+|.||+||--..
T Consensus 352 nV~lv~~~~~~I~~it~--~g--v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTP--EG--IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCCBS
T ss_pred CEEEEecCCCCceEEcc--Ce--EEeCCC-eeecCEEEECCcccc
Confidence 566664 788888864 34 444566 557999999987553
No 207
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=62.83 E-value=8.6 Score=29.44 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=28.2
Q ss_pred ceeEEcCceeEEEEecC-CeEEEEeC---Ccc--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFN-GMWHLSEN---VKL--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~~w~l~~~---~g~--~~~~D~VIlA~P 42 (119)
.++++++++|.+|+..+ +...+... +|. ...+|.||+|+.
T Consensus 239 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 239 GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 46899999999998754 44555432 232 246899999974
No 208
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=61.61 E-value=10 Score=28.46 Aligned_cols=37 Identities=8% Similarity=0.081 Sum_probs=25.8
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
++++ ..+|+.|...++ .+..++|....||.||+|+-.
T Consensus 74 v~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~ 110 (437)
T 3sx6_A 74 IHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGP 110 (437)
T ss_dssp CEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCC
T ss_pred CEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCC
Confidence 4555 468888887666 455555654569999999853
No 209
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=61.19 E-value=11 Score=30.08 Aligned_cols=50 Identities=6% Similarity=0.017 Sum_probs=33.1
Q ss_pred cceeEEcCceeEEEEec----CCe---EEEEeCCcc--ccccC-EEEEcCCHHHHHhhcC
Q 041088 2 SMFSIVRPCWISNLEPF----NGM---WHLSENVKL--RGQFD-VVVIAHKGKCANRLLG 51 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~----~~~---w~l~~~~g~--~~~~D-~VIlA~Pa~qaa~LL~ 51 (119)
.+++|.++++|++|..+ +++ .++...+|. ...++ .|||++-+-.+-+||.
T Consensus 240 ~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~ 299 (583)
T 3qvp_A 240 PNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE 299 (583)
T ss_dssp TTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred CCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH
Confidence 47899999999999886 332 222323342 23455 6999988766666653
No 210
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=61.02 E-value=5.2 Score=30.07 Aligned_cols=37 Identities=5% Similarity=-0.014 Sum_probs=25.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeC--CccccccCEEEEcC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSEN--VKLRGQFDVVVIAH 41 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~--~g~~~~~D~VIlA~ 41 (119)
.++++++++|++|+. ++..+... ++....||.||+++
T Consensus 214 GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~ 252 (430)
T 3h28_A 214 NIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMP 252 (430)
T ss_dssp TCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEEC
T ss_pred CCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECC
Confidence 478999999999964 34444431 14455799999985
No 211
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=60.88 E-value=14 Score=29.48 Aligned_cols=50 Identities=12% Similarity=-0.064 Sum_probs=34.3
Q ss_pred cceeEEcCceeEEEEec--CCe---EEEEeCCcc--cccc-CEEEEcCCHHHHHhhcC
Q 041088 2 SMFSIVRPCWISNLEPF--NGM---WHLSENVKL--RGQF-DVVVIAHKGKCANRLLG 51 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~--~~~---w~l~~~~g~--~~~~-D~VIlA~Pa~qaa~LL~ 51 (119)
.+++|.+++.|++|..+ +++ .++...+|. ...+ ..|||++-+-...+||-
T Consensus 219 ~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~ 276 (577)
T 3q9t_A 219 PNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM 276 (577)
T ss_dssp TTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHH
Confidence 47899999999999887 443 333333242 2335 57999998877777664
No 212
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=60.29 E-value=14 Score=30.23 Aligned_cols=36 Identities=8% Similarity=-0.165 Sum_probs=26.8
Q ss_pred eeEEcCceeEEEEecC--CeEE-EEeCCccccccCEEEE
Q 041088 4 FSIVRPCWISNLEPFN--GMWH-LSENVKLRGQFDVVVI 39 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~--~~w~-l~~~~g~~~~~D~VIl 39 (119)
..|+++++|.+|...+ ++.. +...+|....+|.||+
T Consensus 393 g~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs 431 (650)
T 1vg0_A 393 GIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFII 431 (650)
T ss_dssp CEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEE
T ss_pred CEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEE
Confidence 5799999999998876 5443 4445565557899998
No 213
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=59.77 E-value=6.3 Score=30.41 Aligned_cols=41 Identities=10% Similarity=-0.144 Sum_probs=30.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe-CCcc--ccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE-NVKL--RGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~-~~g~--~~~~D~VIlA~Pa 43 (119)
.+++++++.|.+|...++.|.+.. +++. ...+|+||+|+-+
T Consensus 174 ~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 174 NTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp TEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred CCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 567889999999988887776643 3332 3468999999753
No 214
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=59.27 E-value=13 Score=29.74 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=27.5
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc-cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK-LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g-~~~~~D~VIlA~Pa 43 (119)
.++++++++|.+|. +++..+..+++ ....+|.||+++..
T Consensus 587 GV~v~~~~~v~~i~--~~~v~~~~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 587 GVKMIPGVSYQKID--DDGLHVVINGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp TCEEECSCEEEEEE--TTEEEEEETTEEEEECCSEEEECCCE
T ss_pred CCEEEeCcEEEEEe--CCeEEEecCCeEEEEeCCEEEECCCc
Confidence 46899999999987 34555543332 45579999999853
No 215
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=59.13 E-value=3.8 Score=30.95 Aligned_cols=38 Identities=5% Similarity=-0.023 Sum_probs=26.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|++++. ++..+...+| ....+|.||++++
T Consensus 214 GV~~~~~~~v~~v~~--~~~~~~~~~g~~~~i~~d~vi~~~G 253 (430)
T 3hyw_A 214 NIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp TCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECE
T ss_pred CeEEEeCceEEEEeC--CceEEEeeCCCceEeecceEEEecc
Confidence 478999999999863 4444544332 4557999999874
No 216
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=57.80 E-value=15 Score=27.18 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=25.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
++++.+ +|+.+...+....+....+ ....||.||+|+-
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG 110 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIG 110 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCC
T ss_pred eEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCC
Confidence 567776 8888987776655543222 1246999999974
No 217
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=57.73 E-value=17 Score=28.67 Aligned_cols=42 Identities=10% Similarity=-0.047 Sum_probs=30.1
Q ss_pred ceeEEcCceeEEEEecCCe-E-EEEeC------Cc---------cccccCEEEEcCCHH
Q 041088 3 MFSIVRPCWISNLEPFNGM-W-HLSEN------VK---------LRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~-w-~l~~~------~g---------~~~~~D~VIlA~Pa~ 44 (119)
.++|+++++|++|..++++ . .|... +| ....+|.||+|.-..
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 4789999999999987644 3 35543 22 345689999998654
No 218
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=57.65 E-value=10 Score=29.84 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=25.0
Q ss_pred ceeEE--cCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIV--RPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~--~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
++++. ....|++|+. ++ +.+.+| ...+|.||+||--.
T Consensus 357 ~V~lvd~~~~~I~~it~--~g--v~~~dG-~~~~D~iI~ATGf~ 395 (549)
T 4ap3_A 357 NVELVDLRSTPIVGMDE--TG--IVTTGA-HYDLDMIVLATGFD 395 (549)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCEE
T ss_pred CEEEEeCCCCCceEEeC--Cc--EEeCCC-ceecCEEEECCccc
Confidence 45665 3578888864 34 444566 55799999998643
No 219
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=57.39 E-value=15 Score=27.53 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=25.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++. .+|+.|...++ .+..+++....||.||+|+-
T Consensus 70 gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG 106 (430)
T 3h28_A 70 NIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATG 106 (430)
T ss_dssp TEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCC
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCC
Confidence 355665 48888877665 45555554456999999974
No 220
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=57.04 E-value=17 Score=28.85 Aligned_cols=51 Identities=18% Similarity=0.075 Sum_probs=34.8
Q ss_pred cceeEEcCceeEEEEec---CC-----eEEEEeCCc-c--cccc-CEEEEcCCHHHHHhhcCC
Q 041088 2 SMFSIVRPCWISNLEPF---NG-----MWHLSENVK-L--RGQF-DVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~---~~-----~w~l~~~~g-~--~~~~-D~VIlA~Pa~qaa~LL~~ 52 (119)
.+++|.+++.|++|..+ ++ |.++...+| . ...+ +.|||++-+-.+.+||.-
T Consensus 221 ~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~l 283 (566)
T 3fim_B 221 PNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQL 283 (566)
T ss_dssp TTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred CCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHh
Confidence 57999999999999876 22 233333323 2 2234 679999988888777643
No 221
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=55.91 E-value=11 Score=29.85 Aligned_cols=51 Identities=12% Similarity=-0.026 Sum_probs=33.5
Q ss_pred cceeEEcCceeEEEEecCC----e-EEEEe--CCc--ccccc-CEEEEcCCHHHHHhhcCC
Q 041088 2 SMFSIVRPCWISNLEPFNG----M-WHLSE--NVK--LRGQF-DVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 2 ~~~~i~~~~~V~~i~~~~~----~-w~l~~--~~g--~~~~~-D~VIlA~Pa~qaa~LL~~ 52 (119)
.+++|++++.|++|..+++ + ..+.. .+| ....+ +.||||+-+-...+||-.
T Consensus 244 ~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~ 304 (587)
T 1gpe_A 244 SNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY 304 (587)
T ss_dssp TTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred CCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh
Confidence 4789999999999987641 1 12222 233 23346 889999988766666543
No 222
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=55.45 E-value=10 Score=29.51 Aligned_cols=47 Identities=6% Similarity=-0.022 Sum_probs=29.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc----cccccCEEEEcC---CHHHHHhh
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK----LRGQFDVVVIAH---KGKCANRL 49 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g----~~~~~D~VIlA~---Pa~qaa~L 49 (119)
.++|+++++|.+++.++........+| ....+|.||.|+ |.+.+..|
T Consensus 286 GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l 339 (502)
T 4g6h_A 286 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL 339 (502)
T ss_dssp TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHH
T ss_pred ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhH
Confidence 478999999999964332233333443 235699999886 45544444
No 223
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=55.02 E-value=9.2 Score=30.59 Aligned_cols=49 Identities=12% Similarity=0.035 Sum_probs=33.9
Q ss_pred ceeEEcCceeEEEEecCC----eEEEEeC------Cc--cccccCEEEEcCCHHH-HHhhcC
Q 041088 3 MFSIVRPCWISNLEPFNG----MWHLSEN------VK--LRGQFDVVVIAHKGKC-ANRLLG 51 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~----~w~l~~~------~g--~~~~~D~VIlA~Pa~q-aa~LL~ 51 (119)
+++|+++++|++|+.+++ ++.+... +| ....+|.||.|.-... ..++|.
T Consensus 157 ~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 157 RLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp CCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred CcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 348999999999998763 5777542 33 3456899999986543 445553
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.48 E-value=9.2 Score=28.23 Aligned_cols=35 Identities=9% Similarity=-0.121 Sum_probs=26.1
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|.+++ .++ +..++|. ..+|.||+|+.
T Consensus 197 gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G 231 (367)
T 1xhc_A 197 GVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIG 231 (367)
T ss_dssp TEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECC
T ss_pred CCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcC
Confidence 47899999999997 233 4555565 67999999874
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.11 E-value=15 Score=27.63 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=25.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc-cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK-LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g-~~~~~D~VIlA~P 42 (119)
.++++.++.+. + +.+.|.+...+| ....||.||+|+-
T Consensus 105 gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATG 142 (455)
T 1ebd_A 105 KVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATG 142 (455)
T ss_dssp TCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCC
T ss_pred CCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecC
Confidence 35677777553 3 456788877655 4456999999973
No 226
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=54.01 E-value=21 Score=27.92 Aligned_cols=43 Identities=14% Similarity=-0.017 Sum_probs=29.5
Q ss_pred ceeEEcCceeEEEEe-cCC------e-EEEE--e-CCcc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEP-FNG------M-WHLS--E-NVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~-~~~------~-w~l~--~-~~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|++++.|.+|.. +++ + +.+. . .+|. ...++.||+|+-...
T Consensus 153 gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 153 NIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp TEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred CCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 588999999999987 434 3 2233 2 2342 446899999997544
No 227
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=53.91 E-value=12 Score=28.81 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=28.7
Q ss_pred ceeEEcCceeEEEEecCCeE---EEEeCCccccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW---HLSENVKLRGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w---~l~~~~g~~~~~D~VIlA~Pa~q 45 (119)
.++|+.+++| +|..++++. .+...+|. ..+|.||+|+-...
T Consensus 133 gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~-~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 133 GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV-EDVDKLVLATGGYS 176 (472)
T ss_dssp TCCEECCCEE-EEEEETTEEEEEEETTTEEE-CCCSEEEECCCCCG
T ss_pred CCEEEECcEE-EEEEeCCEEEEEEEEeCCCe-EEeeeEEECCCCCc
Confidence 4789999999 998777653 33333444 35899999986543
No 228
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.42 E-value=15 Score=27.83 Aligned_cols=37 Identities=8% Similarity=-0.133 Sum_probs=25.4
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
.+++++++.+. + +.+.|.+...+| ....||.||+|+-
T Consensus 110 gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtG 148 (470)
T 1dxl_A 110 KVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATG 148 (470)
T ss_dssp TCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCC
T ss_pred CCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCC
Confidence 35677777654 3 456788876555 4457999999974
No 229
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=53.18 E-value=23 Score=28.71 Aligned_cols=43 Identities=16% Similarity=-0.159 Sum_probs=30.0
Q ss_pred ceeEEcCceeEEEEecCCe---EEEE-eCCcc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPFNGM---WHLS-ENVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~---w~l~-~~~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|+.++.|.+|..++++ ..+. ..+|. ...++.||+|+-...
T Consensus 172 gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 172 GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4789999999999876653 2232 23443 346899999997654
No 230
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=51.20 E-value=16 Score=27.68 Aligned_cols=36 Identities=6% Similarity=0.016 Sum_probs=26.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|++++. + .+...+|....+|.||+|+.
T Consensus 202 gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G 237 (437)
T 4eqs_A 202 EIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVG 237 (437)
T ss_dssp TCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCC
T ss_pred ceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEec
Confidence 367899999998853 2 35555665557999999974
No 231
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=50.90 E-value=17 Score=25.41 Aligned_cols=33 Identities=15% Similarity=-0.001 Sum_probs=22.6
Q ss_pred ceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 10 CWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 10 ~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
..|..+....+.+.+..+++....+|+||+||-
T Consensus 86 ~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG 118 (314)
T 4a5l_A 86 ETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATG 118 (314)
T ss_dssp CCEEEEECSSSSEEEEETTCCEEEEEEEEECCC
T ss_pred eEEEEeecCCCceEEEECCCeEEEEeEEEEccc
Confidence 345566666666666666665556899999974
No 232
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=49.22 E-value=15 Score=26.93 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=26.3
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~P 42 (119)
.++++++++|..+...+. .+..+++. ..||.||+|+-
T Consensus 74 ~v~~~~~~~v~~i~~~~~--~v~~~~~~-~~~d~lviAtG 110 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQ--RIWIGEEE-VRYRDLVLAWG 110 (384)
T ss_dssp TCEEECSCCCCEEEGGGT--EEEETTEE-EECSEEEECCC
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCcE-EECCEEEEeCC
Confidence 467888999999876544 45544443 46899999974
No 233
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=49.16 E-value=16 Score=27.44 Aligned_cols=38 Identities=5% Similarity=0.085 Sum_probs=25.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe--CC-----ccccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE--NV-----KLRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~--~~-----g~~~~~D~VIlA~P 42 (119)
.++++++++|.+|+. ++..+.. .+ +....||.||++++
T Consensus 222 gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 222 GIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp TCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred CCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 478999999999964 3444432 22 33456999999854
No 234
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=49.14 E-value=13 Score=28.21 Aligned_cols=36 Identities=3% Similarity=-0.183 Sum_probs=24.4
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc--cc------cccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK--LR------GQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g--~~------~~~D~VIlA~P 42 (119)
+++++++.+. .+++.+.+...+| .. ..||.||+|+-
T Consensus 111 v~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 111 VTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp CEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCC
T ss_pred CEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcC
Confidence 5667776654 2456788876554 34 57999999984
No 235
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=49.13 E-value=22 Score=28.58 Aligned_cols=44 Identities=20% Similarity=-0.050 Sum_probs=30.5
Q ss_pred ceeEEcCceeEEEEecCCeE---EEEe-CCcc--ccccCEEEEcCCHHHH
Q 041088 3 MFSIVRPCWISNLEPFNGMW---HLSE-NVKL--RGQFDVVVIAHKGKCA 46 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w---~l~~-~~g~--~~~~D~VIlA~Pa~qa 46 (119)
.++|+.++.|.+|..++++. .+.. .+|. ...++.||+|+-....
T Consensus 169 gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 169 DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 47899999999998776642 2222 3442 3468999999976543
No 236
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=48.16 E-value=24 Score=26.69 Aligned_cols=36 Identities=6% Similarity=0.087 Sum_probs=24.4
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccc--cccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLR--GQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~--~~~D~VIlA~P 42 (119)
++++.+ ++..+. .+.+.+...+|.. ..||.||+|+-
T Consensus 104 v~~~~g-~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG 141 (466)
T 3l8k_A 104 LTFYKG-YVKIKD--PTHVIVKTDEGKEIEAETRYMIIASG 141 (466)
T ss_dssp EEEESE-EEEEEE--TTEEEEEETTSCEEEEEEEEEEECCC
T ss_pred CEEEEe-EEEEec--CCeEEEEcCCCcEEEEecCEEEECCC
Confidence 455555 455554 4578888766654 67999999974
No 237
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=47.47 E-value=25 Score=27.88 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=29.7
Q ss_pred ceeEEcCceeEEEEec-CCe-EEEE--e-CCcc--ccccCEEEEcCCHHH
Q 041088 3 MFSIVRPCWISNLEPF-NGM-WHLS--E-NVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~-~~~-w~l~--~-~~g~--~~~~D~VIlA~Pa~q 45 (119)
.++|+++++|++|..+ +++ +.+. . .+|. ...++.||+|+-...
T Consensus 157 gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 157 HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 4789999999999885 443 2233 2 3442 346899999997644
No 238
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=46.97 E-value=25 Score=25.76 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=24.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCccccccCEEEEcCCH
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKG 43 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa 43 (119)
+++.. .+|+.|.+.+.. +...+|....||.+|+|+-.
T Consensus 70 v~~i~-~~v~~id~~~~~--v~~~~g~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 70 IQVVH-DSALGIDPDKKL--VKTAGGAEFAYDRCVVAPGI 106 (401)
T ss_dssp CEEEC-SCEEEEETTTTE--EEETTSCEEECSEEEECCCE
T ss_pred CEEEE-eEEEEEEccCcE--EEecccceeecceeeeccCC
Confidence 34444 468888877664 44455555579999999864
No 239
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=46.05 E-value=15 Score=27.71 Aligned_cols=37 Identities=14% Similarity=-0.033 Sum_probs=24.6
Q ss_pred ceeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
.+++++++.+. .+++.+.+...+| ....||.||+|+-
T Consensus 105 gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG 143 (464)
T 2a8x_A 105 KITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATG 143 (464)
T ss_dssp TCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCC
T ss_pred CCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCC
Confidence 35667766543 3456788876555 4457899999973
No 240
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=45.10 E-value=31 Score=26.74 Aligned_cols=40 Identities=5% Similarity=-0.105 Sum_probs=28.4
Q ss_pred ceeEEcCceeEEEEecCCeE-EEEe---CCc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMW-HLSE---NVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w-~l~~---~~g--~~~~~D~VIlA~P 42 (119)
.++++++++|++|..++++. .+.. .+| ....+|.||+++.
T Consensus 405 gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 405 NVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp TEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 57899999999998766543 2332 223 2456899999975
No 241
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=41.45 E-value=35 Score=25.71 Aligned_cols=36 Identities=14% Similarity=0.067 Sum_probs=22.6
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
++++.++ +..+. .+.+.+...+| ....||+||+|+-
T Consensus 110 v~~~~g~-~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtG 147 (467)
T 1zk7_A 110 ITVVHGE-ARFKD--DQSLTVRLNEGGERVVMFDRCLVATG 147 (467)
T ss_dssp EEEEEEE-EEEEE--TTEEEEEETTSSEEEEECSEEEECCC
T ss_pred eEEEEEE-EEEcc--CCEEEEEeCCCceEEEEeCEEEEeCC
Confidence 4555543 44343 45677776555 4457999999975
No 242
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=39.68 E-value=30 Score=25.90 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=23.0
Q ss_pred EEcCceeEEEEecCCeEEEEeCCccc-cccCEEEEcCC
Q 041088 6 IVRPCWISNLEPFNGMWHLSENVKLR-GQFDVVVIAHK 42 (119)
Q Consensus 6 i~~~~~V~~i~~~~~~w~l~~~~g~~-~~~D~VIlA~P 42 (119)
|..+..|.++..+++ .+...+|.. ..+|.||+++-
T Consensus 254 i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG 289 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTG 289 (447)
T ss_dssp EEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCC
T ss_pred eEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCC
Confidence 445677877764444 355556643 57999999984
No 243
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=37.56 E-value=22 Score=26.68 Aligned_cols=22 Identities=18% Similarity=-0.020 Sum_probs=15.8
Q ss_pred eeEEcCceeEEEEecCCeEEEE
Q 041088 4 FSIVRPCWISNLEPFNGMWHLS 25 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~ 25 (119)
..|++|++|++|...+++..+.
T Consensus 332 ~~i~l~~~V~~I~~~~~gv~v~ 353 (376)
T 2e1m_A 332 DQIVMGQRMVRLEYYDPGRDGH 353 (376)
T ss_dssp GTEECSEEEEEEEECCCC----
T ss_pred CcEEecCeEEEEEECCCceEEE
Confidence 3689999999999988876554
No 244
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=36.82 E-value=28 Score=26.29 Aligned_cols=36 Identities=6% Similarity=-0.252 Sum_probs=23.2
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc--cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK--LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g--~~~~~D~VIlA~P 42 (119)
+++++++.+. + +.+.+.+...+| ....||.||+|+-
T Consensus 108 v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG 145 (468)
T 2qae_A 108 VTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATG 145 (468)
T ss_dssp CEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCC
T ss_pred CEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCC
Confidence 4566666442 3 346677776555 4456899999874
No 245
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=36.66 E-value=46 Score=25.66 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=26.4
Q ss_pred ceeEEcCceeEEEEecC----CeEEEE--eCCc-c--ccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFN----GMWHLS--ENVK-L--RGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~----~~w~l~--~~~g-~--~~~~D~VIlA~P 42 (119)
.++++++++|.+++..+ ++..+. ..+| . ...+|.||+|+.
T Consensus 264 GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 264 GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 36789999888887643 345443 2333 2 335899999974
No 246
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=35.15 E-value=25 Score=26.85 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=23.8
Q ss_pred eeEEcCceeEEEEec----CCeEEEEeCCcc--ccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPF----NGMWHLSENVKL--RGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~----~~~w~l~~~~g~--~~~~D~VIlA~P 42 (119)
++++.++ +..+... ++.+.+...+|. ...+|.||+|+-
T Consensus 110 v~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATG 153 (499)
T 1xdi_A 110 VQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATG 153 (499)
T ss_dssp CEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCC
T ss_pred CEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 5666665 5555442 245777665553 456999999973
No 247
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=33.59 E-value=29 Score=27.79 Aligned_cols=43 Identities=16% Similarity=-0.018 Sum_probs=29.1
Q ss_pred ce-eEEcCceeEEEEecCC---eE-EEE---eCCcc--ccccCEEEEcCCHHH
Q 041088 3 MF-SIVRPCWISNLEPFNG---MW-HLS---ENVKL--RGQFDVVVIAHKGKC 45 (119)
Q Consensus 3 ~~-~i~~~~~V~~i~~~~~---~w-~l~---~~~g~--~~~~D~VIlA~Pa~q 45 (119)
.+ +|+.++.|.+|..+++ +. .+. ..+|. ...++.||+|+-...
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 45 7899999999988765 43 222 23342 346899999986543
No 248
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=32.50 E-value=25 Score=26.71 Aligned_cols=36 Identities=11% Similarity=-0.093 Sum_probs=21.7
Q ss_pred eeEEcCceeEEEEecCCeEEEEeCCc------------cccccCEEEEcCC
Q 041088 4 FSIVRPCWISNLEPFNGMWHLSENVK------------LRGQFDVVVIAHK 42 (119)
Q Consensus 4 ~~i~~~~~V~~i~~~~~~w~l~~~~g------------~~~~~D~VIlA~P 42 (119)
++++.++.+. .+++.+.+...+| ....+|.||+|+-
T Consensus 110 v~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 110 VDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp CEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCC
T ss_pred cEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCC
Confidence 5566666543 3445677754333 3446899999864
No 249
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=31.90 E-value=31 Score=28.05 Aligned_cols=38 Identities=21% Similarity=0.298 Sum_probs=25.8
Q ss_pred ceeEEcCceeEEEEecCCeEEEEe--CCc-cc------------------cccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFNGMWHLSE--NVK-LR------------------GQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l~~--~~g-~~------------------~~~D~VIlA~P 42 (119)
.++++++++|.+|.. ++..+.. .++ .. ..+|.||+++.
T Consensus 585 GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G 643 (729)
T 1o94_A 585 HVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG 643 (729)
T ss_dssp TCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC
T ss_pred CCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCC
Confidence 478999999999974 3444432 222 22 57999999985
No 250
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=31.48 E-value=43 Score=25.96 Aligned_cols=37 Identities=14% Similarity=0.024 Sum_probs=23.2
Q ss_pred ceeEE--cCceeEEEEecCCeEEEEeCCccccccCEEEEcCCHH
Q 041088 3 MFSIV--RPCWISNLEPFNGMWHLSENVKLRGQFDVVVIAHKGK 44 (119)
Q Consensus 3 ~~~i~--~~~~V~~i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~ 44 (119)
++++. .++.|++|+ +++.. +.+ ....+|.||+||--.
T Consensus 352 ~v~lv~~~~~~i~~i~--~~gv~--~~d-~~~~~D~ii~atG~~ 390 (542)
T 1w4x_A 352 NVHLVDTLSAPIETIT--PRGVR--TSE-REYELDSLVLATGFD 390 (542)
T ss_dssp TEEEEETTTSCEEEEC--SSEEE--ESS-CEEECSEEEECCCCC
T ss_pred CEEEEecCCCCceEEc--CCeEE--eCC-eEEecCEEEEcCCcc
Confidence 34554 367788885 34433 334 445699999998543
No 251
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=31.15 E-value=48 Score=25.58 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=21.7
Q ss_pred ceeEEEEecCCeEEEEe------------------CCccccccCEEEEcCC
Q 041088 10 CWISNLEPFNGMWHLSE------------------NVKLRGQFDVVVIAHK 42 (119)
Q Consensus 10 ~~V~~i~~~~~~w~l~~------------------~~g~~~~~D~VIlA~P 42 (119)
.+|++|.+++....+.. .++....||.+|+|+-
T Consensus 116 ~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtG 166 (502)
T 4g6h_A 116 AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVG 166 (502)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCC
T ss_pred EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCC
Confidence 36778887777665532 1233446999999974
No 252
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=31.15 E-value=7.6 Score=29.45 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=21.8
Q ss_pred EEEEeCCc--cccccCEEEEcCCHHHHHhhcCCC
Q 041088 22 WHLSENVK--LRGQFDVVVIAHKGKCANRLLGSS 53 (119)
Q Consensus 22 w~l~~~~g--~~~~~D~VIlA~Pa~qaa~LL~~~ 53 (119)
+.+..++. ....+|.||++||.-.+|--|..-
T Consensus 233 ~~v~idg~~~~~~~aDGlIVSTPTGSTAYslSAG 266 (365)
T 3pfn_A 233 VDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAG 266 (365)
T ss_dssp EEEEETTEEEEEECSSEEEEECGGGGGTHHHHTT
T ss_pred EEEEECCEEEEEEecCeEEEeCCccHHHHHHhCC
Confidence 45555655 234689999999977776666544
No 253
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=29.30 E-value=77 Score=22.43 Aligned_cols=41 Identities=12% Similarity=-0.113 Sum_probs=28.6
Q ss_pred ceeEEcCceeEEEEecCCeEEE---EeCCc-cccccCEEEEcCCH
Q 041088 3 MFSIVRPCWISNLEPFNGMWHL---SENVK-LRGQFDVVVIAHKG 43 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~~~w~l---~~~~g-~~~~~D~VIlA~Pa 43 (119)
.++++++++|..+..++++... ..+++ ....+|.||-|.-.
T Consensus 116 G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcc
Confidence 3678999999999888876432 22333 33468999999754
No 254
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=29.01 E-value=85 Score=24.49 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=26.2
Q ss_pred ceeEEcCceeEEEEec------C---CeEEEE--eCCcccc--ccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPF------N---GMWHLS--ENVKLRG--QFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~------~---~~w~l~--~~~g~~~--~~D~VIlA~P 42 (119)
.+++++++.+.+|... + +++.+. ..+|... .+|.||+|+.
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G 392 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVG 392 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSC
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeC
Confidence 4688999888888643 2 445554 3344322 3899999974
No 255
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=28.16 E-value=34 Score=24.75 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=17.6
Q ss_pred cccCEEEEcCCHHHHHhhcCCC
Q 041088 32 GQFDVVVIAHKGKCANRLLGSS 53 (119)
Q Consensus 32 ~~~D~VIlA~Pa~qaa~LL~~~ 53 (119)
..+|.||+++|+++...++...
T Consensus 69 ~~~D~Vilavk~~~~~~~~~~l 90 (335)
T 3ghy_A 69 GEQDVVIVAVKAPALESVAAGI 90 (335)
T ss_dssp CCCSEEEECCCHHHHHHHHGGG
T ss_pred CCCCEEEEeCCchhHHHHHHHH
Confidence 3589999999999887776543
No 256
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=27.71 E-value=58 Score=27.49 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=27.2
Q ss_pred ceeEEcCceeEEEEec-CC---eEEEEe--C---Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPF-NG---MWHLSE--N---VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~-~~---~w~l~~--~---~g--~~~~~D~VIlA~P 42 (119)
.++|++++.|.+|... ++ +..+.. . +| ....+|.||+++.
T Consensus 330 GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 330 GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 3679999999999874 33 233433 1 13 4457999999974
No 257
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=27.09 E-value=23 Score=25.17 Aligned_cols=22 Identities=27% Similarity=0.418 Sum_probs=18.1
Q ss_pred cccCEEEEcCCHHHHHhhcCCC
Q 041088 32 GQFDVVVIAHKGKCANRLLGSS 53 (119)
Q Consensus 32 ~~~D~VIlA~Pa~qaa~LL~~~ 53 (119)
..+|.||+|+|+.+....++..
T Consensus 61 ~~~D~vilavk~~~~~~~l~~l 82 (294)
T 3g17_A 61 NTFDVIIIAVKTHQLDAVIPHL 82 (294)
T ss_dssp SCEEEEEECSCGGGHHHHGGGH
T ss_pred CCCCEEEEeCCccCHHHHHHHH
Confidence 3589999999999988877553
No 258
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=25.91 E-value=36 Score=23.00 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=17.2
Q ss_pred ccCEEEEcCCHHHHHhhcCCC
Q 041088 33 QFDVVVIAHKGKCANRLLGSS 53 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL~~~ 53 (119)
.+|.||+++|+.+...++...
T Consensus 81 ~aDvVilavp~~~~~~v~~~l 101 (220)
T 4huj_A 81 QADVVILAVPYDSIADIVTQV 101 (220)
T ss_dssp TSSEEEEESCGGGHHHHHTTC
T ss_pred cCCEEEEeCChHHHHHHHHHh
Confidence 589999999998887776554
No 259
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=25.02 E-value=53 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=16.5
Q ss_pred ccCEEEEcCCHHHHHhhcCC
Q 041088 33 QFDVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL~~ 52 (119)
.+|.||+++|+.+...++..
T Consensus 57 ~~D~vi~~v~~~~~~~v~~~ 76 (263)
T 1yqg_A 57 SDDVLILAVKPQDMEAACKN 76 (263)
T ss_dssp TTSEEEECSCHHHHHHHHTT
T ss_pred cCCEEEEEeCchhHHHHHHH
Confidence 68999999998887777654
No 260
>3db7_A Putative calcium-regulated periplasmic protein; structural genomics, joint center for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron} SCOP: d.98.2.1 PDB: 3due_A*
Probab=24.92 E-value=62 Score=20.36 Aligned_cols=27 Identities=11% Similarity=0.110 Sum_probs=20.1
Q ss_pred CceeEEEEecCCeEEEEeCCccccccC
Q 041088 9 PCWISNLEPFNGMWHLSENVKLRGQFD 35 (119)
Q Consensus 9 ~~~V~~i~~~~~~w~l~~~~g~~~~~D 35 (119)
+.+|..|++..++|.|...+|....||
T Consensus 91 ~~~I~~ie~~~~~YeV~L~ng~el~Fd 117 (127)
T 3db7_A 91 DAKVLKIERDKKDYEVKLSNRTELKFD 117 (127)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCeEEEEEEECCEEEEEECCCcEEEEc
Confidence 678999999888899988766333343
No 261
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=24.83 E-value=24 Score=25.31 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=16.1
Q ss_pred ccCEEEEcCCHHHHHhhcCC
Q 041088 33 QFDVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL~~ 52 (119)
.+|.||+|+|+++....++.
T Consensus 67 ~~D~vilavK~~~~~~~l~~ 86 (307)
T 3ego_A 67 DFDLLVVTVKQHQLQSVFSS 86 (307)
T ss_dssp CCSEEEECCCGGGHHHHHHH
T ss_pred CCCEEEEEeCHHHHHHHHHH
Confidence 58999999999887766543
No 262
>4dsd_A Putative periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.75A {Bacteroides ovatus}
Probab=24.11 E-value=76 Score=20.04 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=18.1
Q ss_pred CceeEEEEecCCeEEEEeCCcc
Q 041088 9 PCWISNLEPFNGMWHLSENVKL 30 (119)
Q Consensus 9 ~~~V~~i~~~~~~w~l~~~~g~ 30 (119)
+.+|..|++..+++.+...++.
T Consensus 93 ~~~I~~iek~~~~YeVeL~n~~ 114 (129)
T 4dsd_A 93 NEGVTKVERDRKGYEIELSTGL 114 (129)
T ss_dssp TTCEEEEEEETTEEEEEETTSC
T ss_pred CCeEEEEEEecCEEEEEeCCCe
Confidence 5789999998888998887663
No 263
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=22.87 E-value=1.1e+02 Score=23.25 Aligned_cols=40 Identities=10% Similarity=-0.050 Sum_probs=26.0
Q ss_pred ceeEEcCceeEEEEecC-C-e---EEEEeC-------------Cc--cccccCEEEEcCC
Q 041088 3 MFSIVRPCWISNLEPFN-G-M---WHLSEN-------------VK--LRGQFDVVVIAHK 42 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~-~-~---w~l~~~-------------~g--~~~~~D~VIlA~P 42 (119)
.+++++++.+.+|...+ + . ..+... +| ....+|.||+++-
T Consensus 271 gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G 330 (460)
T 1cjc_A 271 AWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIG 330 (460)
T ss_dssp EEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCC
T ss_pred eEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCC
Confidence 37899999999998653 3 2 333210 22 3457899999973
No 264
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=22.85 E-value=54 Score=21.98 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=16.2
Q ss_pred ccCEEEEcCCHHHHHhhcCC
Q 041088 33 QFDVVVIAHKGKCANRLLGS 52 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL~~ 52 (119)
.+|.||+++|+++...++..
T Consensus 57 ~aD~vi~av~~~~~~~v~~~ 76 (209)
T 2raf_A 57 LGEIVIMAVPYPALAALAKQ 76 (209)
T ss_dssp CCSEEEECSCHHHHHHHHHH
T ss_pred cCCEEEEcCCcHHHHHHHHH
Confidence 58999999998887776654
No 265
>3elg_A Uncharacterized periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG; HET: CIT; 1.64A {Bacteroides vulgatus atcc 8482} SCOP: d.98.2.1
Probab=22.67 E-value=85 Score=19.67 Aligned_cols=21 Identities=10% Similarity=-0.065 Sum_probs=17.7
Q ss_pred CceeEEEEecCCeEEEEeCCc
Q 041088 9 PCWISNLEPFNGMWHLSENVK 29 (119)
Q Consensus 9 ~~~V~~i~~~~~~w~l~~~~g 29 (119)
+.+|..|++..++|.+...+|
T Consensus 92 ~~~I~~iek~~~~YeVeL~~~ 112 (128)
T 3elg_A 92 GHKTVKIERNRKGYELTLENG 112 (128)
T ss_dssp TCCEEEEEEETTEEEEEETTS
T ss_pred CCEEEEEEEeCCEEEEEECCC
Confidence 678999999888899988766
No 266
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=22.05 E-value=55 Score=22.63 Aligned_cols=19 Identities=5% Similarity=-0.008 Sum_probs=14.9
Q ss_pred cccCEEEEcCCHHHHHhhc
Q 041088 32 GQFDVVVIAHKGKCANRLL 50 (119)
Q Consensus 32 ~~~D~VIlA~Pa~qaa~LL 50 (119)
..+|.||+++|+++...++
T Consensus 56 ~~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 56 QTAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp TTCSEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHH
Confidence 3589999999998765554
No 267
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=21.94 E-value=41 Score=25.10 Aligned_cols=17 Identities=6% Similarity=0.042 Sum_probs=14.4
Q ss_pred ceeEEcCceeEEEEecC
Q 041088 3 MFSIVRPCWISNLEPFN 19 (119)
Q Consensus 3 ~~~i~~~~~V~~i~~~~ 19 (119)
.++++.+++|+.|..++
T Consensus 175 gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 175 NVKLFNATTVEDLITRK 191 (344)
T ss_dssp TEEEEETEEEEEEEEEE
T ss_pred CCEEEeCCEEEEEEecC
Confidence 67899999999998765
No 268
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=21.46 E-value=1.7e+02 Score=19.60 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=27.3
Q ss_pred cCceeEEEEecCCeEEEEeCCc-cccccCEEEEcCCHHHHHhh
Q 041088 8 RPCWISNLEPFNGMWHLSENVK-LRGQFDVVVIAHKGKCANRL 49 (119)
Q Consensus 8 ~~~~V~~i~~~~~~w~l~~~~g-~~~~~D~VIlA~Pa~qaa~L 49 (119)
+|+.|..|.+. +.|...-.+. ....-|.||+..+..+..++
T Consensus 148 ~gv~IvaI~R~-g~~i~~P~~dt~L~~GD~Liv~g~~~~i~~~ 189 (205)
T 1vct_A 148 TGVWIIAVRRG-KRWIFGPNENFKIRAGDVLIGRGTRTSIDHL 189 (205)
T ss_dssp HSCEEEEEEET-TEEEESCCTTCBCCTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEEEC-CEEEeCCCCCCEECCCCEEEEEECHHHHHHH
Confidence 37889999874 4555433333 33356999999998876654
No 269
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=20.72 E-value=62 Score=22.45 Aligned_cols=18 Identities=11% Similarity=0.154 Sum_probs=14.9
Q ss_pred ccCEEEEcCCHHHHHhhc
Q 041088 33 QFDVVVIAHKGKCANRLL 50 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL 50 (119)
.+|.||+++|+.....++
T Consensus 62 ~aDvVilavp~~~~~~v~ 79 (281)
T 2g5c_A 62 SPDFVMLSSPVRTFREIA 79 (281)
T ss_dssp CCSEEEECSCHHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHHH
Confidence 589999999998876554
No 270
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.33 E-value=69 Score=20.26 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=16.1
Q ss_pred ccCEEEEcCCHHHHHhhcC
Q 041088 33 QFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 33 ~~D~VIlA~Pa~qaa~LL~ 51 (119)
..|.+|+++|+..+.+++.
T Consensus 77 ~vDlvvi~vp~~~~~~vv~ 95 (144)
T 2d59_A 77 KIEVVDLFVKPKLTMEYVE 95 (144)
T ss_dssp CCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEEeCHHHHHHHHH
Confidence 4799999999998888764
No 271
>2r31_A ATP12 ATPase; chaperone F1 ATPase assembly ATP12P, chaperone; 1.00A {Paracoccus denitrificans} SCOP: d.381.1.1 PDB: 2p4x_A 2zd2_A
Probab=20.07 E-value=73 Score=22.55 Aligned_cols=37 Identities=5% Similarity=0.007 Sum_probs=25.3
Q ss_pred EEecCCeEEEEeCCccccccCEEEEcCCHHHHHhhcC
Q 041088 15 LEPFNGMWHLSENVKLRGQFDVVVIAHKGKCANRLLG 51 (119)
Q Consensus 15 i~~~~~~w~l~~~~g~~~~~D~VIlA~Pa~qaa~LL~ 51 (119)
|...++||.|..++...-.--+=++++|..+++.++.
T Consensus 18 v~~~~gg~~V~LDgR~lkTP~~~~L~vPs~~LA~aiA 54 (239)
T 2r31_A 18 IHKEEGGWAVLLDERPLRTPGKQPLRLPTEALALAIA 54 (239)
T ss_dssp EEEETTEEEEEETTEECBCTTSCBCCBSCHHHHHHHH
T ss_pred EEecCCceEEEeCCCCCCCCCCCeeecCcHHHHHHHH
Confidence 4446789999987653333356678888888777653
Done!