Your job contains 1 sequence.
>041090
MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK
ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS
KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA
EQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA
VAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041090
(294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2167331 - symbol:AT5G63490 "AT5G63490" species... 834 3.1e-83 1
ASPGD|ASPL0000033419 - symbol:AN5716 species:162425 "Emer... 411 6.7e-38 1
CGD|CAL0003543 - symbol:orf19.5238 species:5476 "Candida ... 306 1.6e-26 1
POMBASE|SPAC24C9.05c - symbol:mug70 "conserved protein Mu... 245 9.6e-20 1
UNIPROTKB|Q5LRC8 - symbol:SPO2201 "CBS domain protein" sp... 158 2.2e-11 1
TIGR_CMR|SPO_2201 - symbol:SPO_2201 "CBS domain protein" ... 158 2.2e-11 1
UNIPROTKB|Q48IU0 - symbol:PSPPH_2494 "CBS domain protein"... 157 3.0e-11 1
UNIPROTKB|Q8EDA6 - symbol:SO_2856 "Putative nucleotidyltr... 171 2.5e-10 1
TIGR_CMR|SO_2856 - symbol:SO_2856 "CBS domain protein" sp... 171 2.5e-10 1
UNIPROTKB|Q0BYV1 - symbol:HNE_2660 "CBS domain protein" s... 146 5.5e-10 1
UNIPROTKB|Q9KSG5 - symbol:VC_1291 "Putative uncharacteriz... 167 8.0e-10 1
TIGR_CMR|VC_1291 - symbol:VC_1291 "conserved hypothetical... 167 8.0e-10 1
TAIR|locus:4515102654 - symbol:AT1G47271 "AT1G47271" spec... 141 2.0e-09 1
UNIPROTKB|Q5LLL6 - symbol:Q5LLL6 "CBS domain protein" spe... 137 5.7e-09 1
TIGR_CMR|SPO_A0034 - symbol:SPO_A0034 "CBS domain protein... 137 5.7e-09 1
UNIPROTKB|Q5LSF9 - symbol:SPO1809 "Nucleotidyltransferase... 159 6.7e-09 1
TIGR_CMR|SPO_1809 - symbol:SPO_1809 "nucleotidyltransfera... 159 6.7e-09 1
UNIPROTKB|Q81UY6 - symbol:BAS0687 "CBS domain protein" sp... 129 4.5e-08 1
TIGR_CMR|BA_0720 - symbol:BA_0720 "CBS domain protein" sp... 129 4.5e-08 1
TAIR|locus:2183740 - symbol:CBSX3 "AT5G10860" species:370... 128 1.9e-06 1
TIGR_CMR|CHY_2035 - symbol:CHY_2035 "CBS/cyclic nucleotid... 136 3.3e-06 1
UNIPROTKB|Q47UD0 - symbol:CPS_4954 "CBS domain protein" s... 132 9.3e-06 1
TIGR_CMR|CPS_4954 - symbol:CPS_4954 "CBS domain protein" ... 132 9.3e-06 1
UNIPROTKB|Q74BN1 - symbol:GSU2010 "CBS domain pair-contai... 86 0.00017 2
TIGR_CMR|GSU_2010 - symbol:GSU_2010 "CBS domain protein" ... 86 0.00017 2
UNIPROTKB|O06186 - symbol:hrp1 "Hypoxic response protein ... 102 0.00018 1
UNIPROTKB|Q60B97 - symbol:MCA0583 "CBS domain protein" sp... 104 0.00025 1
UNIPROTKB|Q9KP53 - symbol:VC_2523 "Arabinose 5-phosphate ... 114 0.00036 1
TIGR_CMR|VC_2523 - symbol:VC_2523 "conserved hypothetical... 114 0.00036 1
UNIPROTKB|Q71YF1 - symbol:LMOf2365_1894 "CBS domain prote... 109 0.00044 1
UNIPROTKB|Q483T6 - symbol:CPS_1950 "CBS domain protein" s... 95 0.00054 1
TIGR_CMR|CPS_1950 - symbol:CPS_1950 "CBS domain protein" ... 95 0.00054 1
UNIPROTKB|Q3AFS5 - symbol:CHY_0137 "CBS/GGDEF domain prot... 111 0.00055 1
TIGR_CMR|CHY_0137 - symbol:CHY_0137 "CBS/GGDEF domain pro... 111 0.00055 1
>TAIR|locus:2167331 [details] [associations]
symbol:AT5G63490 "AT5G63490" species:3702 "Arabidopsis
thaliana" [GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR000270 InterPro:IPR000644 Pfam:PF00564 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 SMART:SM00666 GO:GO:0016021
EMBL:CP002688 EMBL:AB007649 eggNOG:COG0517 UniGene:At.49212
UniGene:At.71117 EMBL:AK228838 EMBL:AK229928 IPI:IPI00547618
RefSeq:NP_201154.1 ProteinModelPortal:Q9FMV3 SMR:Q9FMV3
PRIDE:Q9FMV3 EnsemblPlants:AT5G63490.1 GeneID:836468
KEGG:ath:AT5G63490 TAIR:At5g63490 HOGENOM:HOG000238622
InParanoid:Q9FMV3 OMA:TIYEACK PhylomeDB:Q9FMV3
ProtClustDB:CLSN2687566 Genevestigator:Q9FMV3 Uniprot:Q9FMV3
Length = 543
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 163/238 (68%), Positives = 202/238 (84%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTVK+LRLSKALT+P T + +AC+RMASRRVDA+LLTD+N +L GI+TDKDI TRVI++
Sbjct: 53 RTVKRLRLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQ 112
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
L ++T VSK+MT+NP+FV S++LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLY
Sbjct: 113 ELNVEETPVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLY 172
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
DAI+RME+AAE+G AIAAAVEGVE+ WG+N S P FIETLR+RMF+PSLSTII ++ KV
Sbjct: 173 DAIARMERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKV 232
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
VSP+D V AKKM EF+S+ A+++ K++GI TSKD+LMRVVA+NL P TLVE
Sbjct: 233 LKVSPTDTVLTVAKKMVEFQSSCAVVIIEDKLRGIFTSKDILMRVVAENLPPSETLVE 290
Score = 189 (71.6 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 47/143 (32%), Positives = 80/143 (55%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+K L + P T+++ A + + + AV++ + L GI T KDI RV+AE L P +T
Sbjct: 230 TKVLKVSPTDTVLTVAKKMVEFQSSCAVVIIEDK--LRGIFTSKDILMRVVAENLPPSET 287
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
+V +MT+NP D+ +EAL M +GKF HLPV + G+V+A++D+ + A++
Sbjct: 288 LVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPVTDKEGDVVAVVDVIHVTHAAVATA 347
Query: 177 EKAAEQGSAIAAAVEGVERQWGS 199
A G+ + +++ W S
Sbjct: 348 GTTAGIGNEATNTM--MQKFWDS 368
>ASPGD|ASPL0000033419 [details] [associations]
symbol:AN5716 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0003938 "IMP dehydrogenase activity"
evidence=RCA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR000270 InterPro:IPR000644
Pfam:PF00564 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:AACD01000098 EMBL:BN001305 OrthoDB:EOG4M0J99
RefSeq:XP_663320.1 ProteinModelPortal:Q5B164
EnsemblFungi:CADANIAT00003346 GeneID:2872007 KEGG:ani:AN5716.2
HOGENOM:HOG000209726 OMA:ISMVENS Uniprot:Q5B164
Length = 666
Score = 411 (149.7 bits), Expect = 6.7e-38, P = 6.7e-38
Identities = 92/240 (38%), Positives = 142/240 (59%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 107 TVLALKPSSALQIKPSTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 166
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 167 LKARDITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 226
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA-FIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GS+ ++E LR +M P+L +++ +
Sbjct: 227 DAMEKLERAYSSSRKLYDALEGVQSELGSSQPQQIIQYVEALRSKMSGPTLESVL-DGMP 285
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V R
Sbjct: 286 PTTVSVRTTVKEAAALMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSVVR 345
Score = 184 (69.8 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 43/121 (35%), Positives = 66/121 (54%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ T V +A M A+L+ D ++ +GI T KDI RVIA GL P V ++
Sbjct: 288 TVSVRTTVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRV 346
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAE 181
MT +P F SD AL+KM G + +LPV+ E GE++ ++D+ K Y + ++ +
Sbjct: 347 MTPHPDFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINSMST 406
Query: 182 Q 182
Q
Sbjct: 407 Q 407
>CGD|CAL0003543 [details] [associations]
symbol:orf19.5238 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000270 InterPro:IPR000644 Pfam:PF00564 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 CGD:CAL0003543 eggNOG:COG0517
EMBL:AACQ01000070 EMBL:AACQ01000071 RefSeq:XP_716307.1
RefSeq:XP_716368.1 ProteinModelPortal:Q5A3N2 GeneID:3641980
GeneID:3642022 KEGG:cal:CaO19.12702 KEGG:cal:CaO19.5238
Uniprot:Q5A3N2
Length = 605
Score = 306 (112.8 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T+ + + M +RR + VL+ + L GI T KD+ R++ GL Q + IMT
Sbjct: 62 PTATVY-EVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQVTIDTIMT 120
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQG 183
+NPI + A +AL MV+ FRHLPV+ E +++ +LDITK + ++E+
Sbjct: 121 KNPICANAADPAGDALNLMVERGFRHLPVLDEKSQIVGVLDITKSYAQQMEKLERMHSSS 180
Query: 184 SAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
+ A++ V + G + F ETL+ +M P+L + N V+ V
Sbjct: 181 KKLHEALDSVHNEIGVGEQPHHVFQYFETLKNKMNGPTLEDALDANTVPTYVNVKASVHE 240
Query: 242 AAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
A M+E R+ + L+ T ++ GI TSKDV++RV+A L P+ V R
Sbjct: 241 ATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVR 289
Score = 174 (66.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 61/188 (32%), Positives = 94/188 (50%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + V ++MT P
Sbjct: 238 VHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPD- 296
Query: 130 VTSDSLAIE-ALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKA-AEQG 183
V L ++ AL+KM G + +LPVV N G++I ++++ K + + I ++E + G
Sbjct: 297 VAPIGLPVQDALRKMFDGHYLNLPVVANEGDIIGVVEVLKLTHITLNQIKQLETSETSNG 356
Query: 184 S-AIAAAVEGV--ERQW-------GSNFSAPY-AFIETLRERMFKPSLSTIITENAKVAI 232
S A+ + EG + W G SA + +ET R P ++ + V I
Sbjct: 357 STAVDSTNEGPAWNKFWTSLDNTDGDTESAHSDSLMETSRGSATAPDITPSEFHSFNVDI 416
Query: 233 VSPSDPVA 240
PSD V+
Sbjct: 417 -KPSDSVS 423
>POMBASE|SPAC24C9.05c [details] [associations]
symbol:mug70 "conserved protein Mug20" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] InterPro:IPR000270 InterPro:IPR000644 Pfam:PF00564
Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 SMART:SM00666
PomBase:SPAC24C9.05c GO:GO:0016021 GO:GO:0005829 GO:GO:0005634
GO:GO:0007126 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0031965
EMBL:AB027787 PIR:T38346 RefSeq:NP_594030.1
ProteinModelPortal:O13965 EnsemblFungi:SPAC24C9.05c.1
GeneID:2541689 KEGG:spo:SPAC24C9.05c OrthoDB:EOG4M0J99
NextBio:20802782 Uniprot:O13965
Length = 730
Score = 245 (91.3 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 54/155 (34%), Positives = 92/155 (59%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L ALT+ ++V++ + MA++R + VL+ D + L+GIVT DI TR + G
Sbjct: 64 TVDSAALDPALTVHMQSLVTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAG 123
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV----------ENGEVIA 161
L QT+++ IM+ +P+ +TSD+ +AL M++ KFRHLPVV + G+VI
Sbjct: 124 LNARQTLIADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIG 183
Query: 162 ILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
I+++ CL + ++R+ + E + A+EG + +
Sbjct: 184 IINMRACLREPLNRIARQQEAAQKLVEALEGAQEE 218
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/128 (34%), Positives = 71/128 (55%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V++A MA V AVL+ D N +SG+ T D+ RV+A GL P ++ V ++MT +P
Sbjct: 274 TTVAEATESMARSGVSAVLVMD-NGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPHP 332
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRMEKAAEQGSAI 186
+ AL++M++GKF +LPVV+ + +I +L + L AI + + E+
Sbjct: 333 DCALASLRVSTALERMIEGKFSNLPVVDESDAIIGMLSLFH-LATAIEQTPEEEEEVFDQ 391
Query: 187 AAAVEGVE 194
A G+E
Sbjct: 392 AENDAGIE 399
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 34/150 (22%), Positives = 74/150 (49%)
Query: 155 ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW----------GSNFSAP 204
+ G+VI I+++ CL + ++R+ + E + A+EG + + S+ S
Sbjct: 177 DEGDVIGIINMRACLREPLNRIARQQEAAQKLVEALEGAQEEIENKSVSGNTNSSSVSGN 236
Query: 205 YA-----FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
+A ++E+L+++ + ++I + + +V VA A + M ++ L++
Sbjct: 237 HAAEFLEYVESLKKKASGLEIMSLIDSSEEPFLVGTRTTVAEATESMARSGVSAVLVMDN 296
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVER 289
+ G+ T+ DV++RV+A L P + V R
Sbjct: 297 GAVSGVFTAHDVVLRVLAAGLDPYRSSVIR 326
>UNIPROTKB|Q5LRC8 [details] [associations]
symbol:SPO2201 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:CP000031 GenomeReviews:CP000031_GR HOGENOM:HOG000187909
OMA:ERMTDRR RefSeq:YP_167427.1 ProteinModelPortal:Q5LRC8
GeneID:3192666 KEGG:sil:SPO2201 PATRIC:23377753
ProtClustDB:CLSK933793 Uniprot:Q5LRC8
Length = 144
Score = 158 (60.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/125 (28%), Positives = 68/125 (54%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ V+ A +A +R+ V+++D GI++++DI + A G VS
Sbjct: 16 VTVSAAATVAQAAAILAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVST 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
MT++ I D+ + L +M +G+FRH+PV+E G+++ ++ D+ K ++ MEK
Sbjct: 76 YMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELA-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>TIGR_CMR|SPO_2201 [details] [associations]
symbol:SPO_2201 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:CP000031 GenomeReviews:CP000031_GR HOGENOM:HOG000187909
OMA:ERMTDRR RefSeq:YP_167427.1 ProteinModelPortal:Q5LRC8
GeneID:3192666 KEGG:sil:SPO2201 PATRIC:23377753
ProtClustDB:CLSK933793 Uniprot:Q5LRC8
Length = 144
Score = 158 (60.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/125 (28%), Positives = 68/125 (54%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ V+ A +A +R+ V+++D GI++++DI + A G VS
Sbjct: 16 VTVSAAATVAQAAAILAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVST 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
MT++ I D+ + L +M +G+FRH+PV+E G+++ ++ D+ K ++ MEK
Sbjct: 76 YMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELA-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>UNIPROTKB|Q48IU0 [details] [associations]
symbol:PSPPH_2494 "CBS domain protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 eggNOG:COG0517 EMBL:CP000058
GenomeReviews:CP000058_GR HOGENOM:HOG000187909 RefSeq:YP_274691.1
ProteinModelPortal:Q48IU0 STRING:Q48IU0 GeneID:3557460
KEGG:psp:PSPPH_2494 PATRIC:19974275 OMA:YARKVIL
ProtClustDB:CLSK865716 Uniprot:Q48IU0
Length = 146
Score = 157 (60.3 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L+ + TI +V DA R MA + + A+ + + N ++ G+V+++D +VI +G
Sbjct: 10 LKDLQNQQVHTIGPDQMVLDALRLMAEKNIGALPVVEGNVVV-GVVSERDYARKVILKGR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQK-MVQGKFRHLPVVENGEVIAILDITKCLYD 171
T V +IM+ I V S ++EA M RHLPVVE+G ++ +L I + +
Sbjct: 69 SSVGTPVREIMSNKVITVDSQQ-SVEACMGIMTDSHLRHLPVVEDGRLLGLLSIGDLVKE 127
Query: 172 AISRMEKAAEQ 182
AI+ +Q
Sbjct: 128 AIAEQASLIQQ 138
>UNIPROTKB|Q8EDA6 [details] [associations]
symbol:SO_2856 "Putative nucleotidyltransferase DUF294"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR005105 Pfam:PF00571
Pfam:PF03445 PROSITE:PS51371 SMART:SM00116 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
KO:K07182 OMA:GLVYHLP InterPro:IPR018821 Pfam:PF10335
HOGENOM:HOG000277101 RefSeq:NP_718428.1 ProteinModelPortal:Q8EDA6
GeneID:1170551 KEGG:son:SO_2856 PATRIC:23525360
ProtClustDB:CLSK906899 Uniprot:Q8EDA6
Length = 620
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/144 (32%), Positives = 74/144 (51%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ L S +TI V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL
Sbjct: 152 ISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGL 210
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
Q V + MT +PI ++S++L EA+ M + HLP+++ D K +
Sbjct: 211 -DGQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNT----DEVKAI-GM 264
Query: 173 ISRMEKAAEQGSAIAAAVEGVERQ 196
++ + QGS + +ERQ
Sbjct: 265 VTSTDILRGQGSQPLLLIGEIERQ 288
>TIGR_CMR|SO_2856 [details] [associations]
symbol:SO_2856 "CBS domain protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000644 InterPro:IPR005105 Pfam:PF00571 Pfam:PF03445
PROSITE:PS51371 SMART:SM00116 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773 KO:K07182 OMA:GLVYHLP
InterPro:IPR018821 Pfam:PF10335 HOGENOM:HOG000277101
RefSeq:NP_718428.1 ProteinModelPortal:Q8EDA6 GeneID:1170551
KEGG:son:SO_2856 PATRIC:23525360 ProtClustDB:CLSK906899
Uniprot:Q8EDA6
Length = 620
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/144 (32%), Positives = 74/144 (51%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ L S +TI V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL
Sbjct: 152 ISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGL 210
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
Q V + MT +PI ++S++L EA+ M + HLP+++ D K +
Sbjct: 211 -DGQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNT----DEVKAI-GM 264
Query: 173 ISRMEKAAEQGSAIAAAVEGVERQ 196
++ + QGS + +ERQ
Sbjct: 265 VTSTDILRGQGSQPLLLIGEIERQ 288
>UNIPROTKB|Q0BYV1 [details] [associations]
symbol:HNE_2660 "CBS domain protein" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000187909 OMA:ERMTDRR RefSeq:YP_761342.1
ProteinModelPortal:Q0BYV1 STRING:Q0BYV1 GeneID:4287219
KEGG:hne:HNE_2660 PATRIC:32218185
BioCyc:HNEP228405:GI69-2670-MONOMER Uniprot:Q0BYV1
Length = 144
Score = 146 (56.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+ +T+ + +A R + RR+ AV+ DA+ + G+++++DI + +G V
Sbjct: 13 EVITLRADDTLREAARLLDERRIGAVVTLDADGEIVGVLSERDIVRQFARQGEGALDMPV 72
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
MTR I +++D+ EALQ M + RHLPVV N + + I + I+ +
Sbjct: 73 GNAMTRAVITISADAEVDEALQLMTDRRIRHLPVVRNSRLTGFVSIGDLVKWKIAETQAE 132
Query: 180 AE 181
AE
Sbjct: 133 AE 134
>UNIPROTKB|Q9KSG5 [details] [associations]
symbol:VC_1291 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR005105 Pfam:PF00571
Pfam:PF03445 PROSITE:PS51371 SMART:SM00116 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
EMBL:AE003852 GenomeReviews:AE003852_GR InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
KO:K07182 InterPro:IPR018821 Pfam:PF10335 OMA:SMVRIRH PIR:F82218
RefSeq:NP_230936.1 ProteinModelPortal:Q9KSG5 DNASU:2614745
GeneID:2614745 KEGG:vch:VC1291 PATRIC:20081662
ProtClustDB:CLSK874301 Uniprot:Q9KSG5
Length = 637
Score = 167 (63.8 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>TIGR_CMR|VC_1291 [details] [associations]
symbol:VC_1291 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
InterPro:IPR005105 Pfam:PF00571 Pfam:PF03445 PROSITE:PS51371
SMART:SM00116 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
GO:GO:0008773 KO:K07182 InterPro:IPR018821 Pfam:PF10335 OMA:SMVRIRH
PIR:F82218 RefSeq:NP_230936.1 ProteinModelPortal:Q9KSG5
DNASU:2614745 GeneID:2614745 KEGG:vch:VC1291 PATRIC:20081662
ProtClustDB:CLSK874301 Uniprot:Q9KSG5
Length = 637
Score = 167 (63.8 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>TAIR|locus:4515102654 [details] [associations]
symbol:AT1G47271 "AT1G47271" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003824 Gene3D:3.20.20.70
eggNOG:COG0517 GO:GO:0008152 HOGENOM:HOG000187909 EMBL:AC079677
IPI:IPI00891494 RefSeq:NP_001117443.1 UniGene:At.69452
ProteinModelPortal:B3H6Z2 SMR:B3H6Z2 PRIDE:B3H6Z2
EnsemblPlants:AT1G47271.1 GeneID:6241044 KEGG:ath:AT1G47271
TAIR:At1g47271 OMA:NILRAME PhylomeDB:B3H6Z2 ProtClustDB:CLSN2925454
Genevestigator:B3H6Z2 Uniprot:B3H6Z2
Length = 193
Score = 141 (54.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 15 PSTSKRTSSSENGGNLSKPPSPQXXXXXXXXXXXXXRTVKKLRLSKALTIPEGTIVSDAC 74
P +R S+ G L+ PP P+ + K + ++ VSDA
Sbjct: 16 PKIHQRKVSA-GFGCLTSPPPPEKGLENLTVADVL--STKDTDIDTWISCRTNDTVSDAV 72
Query: 75 RRMASRRVDAVLLTDAN--ALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT- 131
+ MA + ++++ + ++GIVT++D ++I G T V ++MT VT
Sbjct: 73 KNMAKHNIGSLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTV 132
Query: 132 -SDSLAIEALQKMVQGKFRHLPVVENGEV--IAILDITKCLYD 171
S + I+A+Q M + RH+PV++ V I+++D+ K + D
Sbjct: 133 SSGTNIIKAMQLMSENHIRHVPVIDGKIVGLISMVDVVKAIVD 175
>UNIPROTKB|Q5LLL6 [details] [associations]
symbol:Q5LLL6 "CBS domain protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 HOGENOM:HOG000187909
EMBL:CP000032 GenomeReviews:CP000032_GR RefSeq:YP_164865.1
ProteinModelPortal:Q5LLL6 GeneID:3196778 KEGG:sil:SPOA0034
PATRIC:23381368 OMA:NIGALIC ProtClustDB:CLSK751667 Uniprot:Q5LLL6
Length = 174
Score = 137 (53.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 33/106 (31%), Positives = 59/106 (55%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK- 121
++ G + + +R+ AVL+TD N L GI++++DI R+ A+ P QT+ +
Sbjct: 48 SVRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVRRM-AD--TPGQTLPQQA 104
Query: 122 --IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+MTR D L++M +G+FRHLPV+ +G++ ++ I
Sbjct: 105 EGLMTRAVQTCAPDETLNVVLKRMTEGRFRHLPVMRDGKLCGMITI 150
>TIGR_CMR|SPO_A0034 [details] [associations]
symbol:SPO_A0034 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
HOGENOM:HOG000187909 EMBL:CP000032 GenomeReviews:CP000032_GR
RefSeq:YP_164865.1 ProteinModelPortal:Q5LLL6 GeneID:3196778
KEGG:sil:SPOA0034 PATRIC:23381368 OMA:NIGALIC
ProtClustDB:CLSK751667 Uniprot:Q5LLL6
Length = 174
Score = 137 (53.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 33/106 (31%), Positives = 59/106 (55%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK- 121
++ G + + +R+ AVL+TD N L GI++++DI R+ A+ P QT+ +
Sbjct: 48 SVRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVRRM-AD--TPGQTLPQQA 104
Query: 122 --IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+MTR D L++M +G+FRHLPV+ +G++ ++ I
Sbjct: 105 EGLMTRAVQTCAPDETLNVVLKRMTEGRFRHLPVMRDGKLCGMITI 150
>UNIPROTKB|Q5LSF9 [details] [associations]
symbol:SPO1809 "Nucleotidyltransferase/CBS/cyclic
nucleotide-binding domain protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR005105 InterPro:IPR013785
Pfam:PF00571 Pfam:PF03445 PROSITE:PS51371 SMART:SM00116
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008152 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
KO:K07182 InterPro:IPR018821 Pfam:PF10335 HOGENOM:HOG000277101
RefSeq:YP_167046.1 ProteinModelPortal:Q5LSF9 GeneID:3193042
KEGG:sil:SPO1809 PATRIC:23376947 OMA:YEEAYHF ProtClustDB:CLSK933646
Uniprot:Q5LSF9
Length = 607
Score = 159 (61.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 39/140 (27%), Positives = 75/140 (53%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L T T V A + M +R + ++ + + AL+ GI+T +D++ +V+AE
Sbjct: 144 VETLMARDPATCAPDTTVQAAAQEMRARSISSLCVCEDGALV-GILTQRDLSGKVVAEAR 202
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
PD T V ++MT P+ + ++ + L M++ H+P+VE G ++ ++ D+T+
Sbjct: 203 SPD-TPVDQVMTPAPLTLAPSAIGSDVLHAMMERHIGHIPIVEAGRLVGMVTQTDLTR-- 259
Query: 170 YDAISRMEKAAEQGSAIAAA 189
+ A+S E + A +AA
Sbjct: 260 FQAVSSAELVSRLARATSAA 279
>TIGR_CMR|SPO_1809 [details] [associations]
symbol:SPO_1809 "nucleotidyltransferase/CBS/cyclic
nucleotide-binding domain protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0008150 "biological_process" evidence=ND]
[GO:0016779 "nucleotidyltransferase activity" evidence=ISS]
[GO:0030551 "cyclic nucleotide binding" evidence=ISS]
InterPro:IPR000644 InterPro:IPR005105 InterPro:IPR013785
Pfam:PF00571 Pfam:PF03445 PROSITE:PS51371 SMART:SM00116
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008152 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
KO:K07182 InterPro:IPR018821 Pfam:PF10335 HOGENOM:HOG000277101
RefSeq:YP_167046.1 ProteinModelPortal:Q5LSF9 GeneID:3193042
KEGG:sil:SPO1809 PATRIC:23376947 OMA:YEEAYHF ProtClustDB:CLSK933646
Uniprot:Q5LSF9
Length = 607
Score = 159 (61.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 39/140 (27%), Positives = 75/140 (53%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L T T V A + M +R + ++ + + AL+ GI+T +D++ +V+AE
Sbjct: 144 VETLMARDPATCAPDTTVQAAAQEMRARSISSLCVCEDGALV-GILTQRDLSGKVVAEAR 202
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
PD T V ++MT P+ + ++ + L M++ H+P+VE G ++ ++ D+T+
Sbjct: 203 SPD-TPVDQVMTPAPLTLAPSAIGSDVLHAMMERHIGHIPIVEAGRLVGMVTQTDLTR-- 259
Query: 170 YDAISRMEKAAEQGSAIAAA 189
+ A+S E + A +AA
Sbjct: 260 FQAVSSAELVSRLARATSAA 279
>UNIPROTKB|Q81UY6 [details] [associations]
symbol:BAS0687 "CBS domain protein" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000187907 RefSeq:NP_843245.1 RefSeq:YP_017353.1
RefSeq:YP_026963.1 ProteinModelPortal:Q81UY6 DNASU:1088314
EnsemblBacteria:EBBACT00000011885 EnsemblBacteria:EBBACT00000014035
EnsemblBacteria:EBBACT00000021909 GeneID:1088314 GeneID:2820041
GeneID:2847914 KEGG:ban:BA_0720 KEGG:bar:GBAA_0720 KEGG:bat:BAS0687
OMA:STHIVHC ProtClustDB:CLSK915937
BioCyc:BANT260799:GJAJ-767-MONOMER
BioCyc:BANT261594:GJ7F-794-MONOMER Uniprot:Q81UY6
Length = 139
Score = 129 (50.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A +M + + + + N + G+VTD+D+ R IAE P ++ +MT N I
Sbjct: 21 VYEAAVKMKEESIGLIPVVE-NEQVVGLVTDRDLVVRGIAEK-HPGSNKITNVMTTNIIS 78
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ-GSAIAA 188
V D +A + M Q + R LPVVE+ +++ +L L D R E A +Q G A++
Sbjct: 79 VAPDDSLEKATELMAQHQIRRLPVVESDQLVGML----ALGDLAIR-ESADDQAGFALSE 133
Query: 189 AVEGVE 194
E E
Sbjct: 134 ISEHTE 139
>TIGR_CMR|BA_0720 [details] [associations]
symbol:BA_0720 "CBS domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000187907 RefSeq:NP_843245.1 RefSeq:YP_017353.1
RefSeq:YP_026963.1 ProteinModelPortal:Q81UY6 DNASU:1088314
EnsemblBacteria:EBBACT00000011885 EnsemblBacteria:EBBACT00000014035
EnsemblBacteria:EBBACT00000021909 GeneID:1088314 GeneID:2820041
GeneID:2847914 KEGG:ban:BA_0720 KEGG:bar:GBAA_0720 KEGG:bat:BAS0687
OMA:STHIVHC ProtClustDB:CLSK915937
BioCyc:BANT260799:GJAJ-767-MONOMER
BioCyc:BANT261594:GJ7F-794-MONOMER Uniprot:Q81UY6
Length = 139
Score = 129 (50.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A +M + + + + N + G+VTD+D+ R IAE P ++ +MT N I
Sbjct: 21 VYEAAVKMKEESIGLIPVVE-NEQVVGLVTDRDLVVRGIAEK-HPGSNKITNVMTTNIIS 78
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ-GSAIAA 188
V D +A + M Q + R LPVVE+ +++ +L L D R E A +Q G A++
Sbjct: 79 VAPDDSLEKATELMAQHQIRRLPVVESDQLVGML----ALGDLAIR-ESADDQAGFALSE 133
Query: 189 AVEGVE 194
E E
Sbjct: 134 ISEHTE 139
>TAIR|locus:2183740 [details] [associations]
symbol:CBSX3 "AT5G10860" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP;RCA] [GO:0050897 "cobalt ion
binding" evidence=IDA] [GO:0045454 "cell redox homeostasis"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006833
"water transport" evidence=RCA] [GO:0006972 "hyperosmotic response"
evidence=RCA] [GO:0007030 "Golgi organization" evidence=RCA]
[GO:0009266 "response to temperature stimulus" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009651
eggNOG:COG0517 GO:GO:0050897 GO:GO:0045454 EMBL:AL365234
EMBL:AF361845 EMBL:AY066046 IPI:IPI00520382 PIR:T50795
RefSeq:NP_196647.1 UniGene:At.28210 ProteinModelPortal:Q9LEV3
SMR:Q9LEV3 STRING:Q9LEV3 PaxDb:Q9LEV3 PRIDE:Q9LEV3 ProMEX:Q9LEV3
EnsemblPlants:AT5G10860.1 GeneID:830953 KEGG:ath:AT5G10860
GeneFarm:1947 TAIR:At5g10860 HOGENOM:HOG000187909 InParanoid:Q9LEV3
OMA:ERMTDRR PhylomeDB:Q9LEV3 ProtClustDB:CLSN2686434
Genevestigator:Q9LEV3 GermOnline:AT5G10860 Uniprot:Q9LEV3
Length = 206
Score = 128 (50.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 70 VSDACRRMASRRVDAVLLTDANA--LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V DA + M V A+++ L+GI+T++D ++I +G T V IMT
Sbjct: 81 VYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 140
Query: 128 --IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I VT ++ + A+Q M + RH+PV+++ +I ++ I
Sbjct: 141 KLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180
>TIGR_CMR|CHY_2035 [details] [associations]
symbol:CHY_2035 "CBS/cyclic nucleotide-binding domain
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=ISS] InterPro:IPR000644
InterPro:IPR005105 Pfam:PF00571 Pfam:PF03445 PROSITE:PS51371
SMART:SM00116 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 EMBL:CP000141 GenomeReviews:CP000141_GR
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS50042
GO:GO:0008773 RefSeq:YP_360854.1 ProteinModelPortal:Q3AAI0
STRING:Q3AAI0 GeneID:3728732 KEGG:chy:CHY_2035 PATRIC:21277151
eggNOG:COG2905 HOGENOM:HOG000041831 KO:K07182 OMA:GLVYHLP
ProtClustDB:CLSK941176 BioCyc:CHYD246194:GJCN-2034-MONOMER
InterPro:IPR018821 Pfam:PF10335 Uniprot:Q3AAI0
Length = 631
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/184 (22%), Positives = 83/184 (45%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP-DQTVVSKIMTR 125
G + MA +V +V++ D GI+T+ D+ +V+AE P D + IM +
Sbjct: 171 GESIKTIANLMAQHQVSSVVIVDNYNRPLGIITEHDLVRKVLAESKTPTDSLIALDIMNK 230
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKAAEQ 182
NP ++ D+ + L +M++ + RHL V EN ++ I+ D+ K + + E
Sbjct: 231 NPATISPDAYYSQILLEMIKKQVRHLLVTENETLLGIITLKDLLKSRETGTITIVNSLET 290
Query: 183 GSAIAAAVEGVERQWG---------SNFSAPYAFIETLRERMFKPSLSTIITENAKVAIV 233
S+ +G++ G + + Y + +R ++ ++ +TE K +
Sbjct: 291 ASSPKEIKQGLKDAEGVLTALVSEKAGIAEIYKIMTEFFDRAYRKAVELALTEMEKESGP 350
Query: 234 SPSD 237
P+D
Sbjct: 351 PPAD 354
>UNIPROTKB|Q47UD0 [details] [associations]
symbol:CPS_4954 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR005105 Pfam:PF00571 Pfam:PF03445
PROSITE:PS51371 SMART:SM00116 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR018490 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
eggNOG:COG2905 KO:K07182 InterPro:IPR018821 Pfam:PF10335
RefSeq:YP_271593.1 ProteinModelPortal:Q47UD0 STRING:Q47UD0
GeneID:3520231 KEGG:cps:CPS_4954 PATRIC:21472703
HOGENOM:HOG000277101 OMA:SMVRIRH
BioCyc:CPSY167879:GI48-4955-MONOMER Uniprot:Q47UD0
Length = 624
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 40/144 (27%), Positives = 62/144 (43%)
Query: 24 SENGGNLSKPPSPQXXXXXXXXXXXXXRTVKKLRLSKALTIPEGTIVSDACRRMASRRVD 83
S+N K Q +V S +I + A +M +
Sbjct: 136 SQNSAQRLKTKMSQVNEEAILSSTLMNTSVSNFYQSPVASISAEQTIQQAAVQMTEQGYS 195
Query: 84 A-VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQK 142
V+L + N + GIVTDKDI R +AEGL + V+S IMTR+ + + A +AL
Sbjct: 196 CLVVLENDNPV--GIVTDKDIRRRCVAEGLSTSE-VISAIMTRDMCTIDAKCNAYDALMM 252
Query: 143 MVQGKFRHLPVVENGEVIAILDIT 166
M HLPV + ++ ++ +T
Sbjct: 253 MTAKHIHHLPVTKYDNLVGMVTVT 276
>TIGR_CMR|CPS_4954 [details] [associations]
symbol:CPS_4954 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR005105 Pfam:PF00571 Pfam:PF03445
PROSITE:PS51371 SMART:SM00116 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR018490 SUPFAM:SSF51206 PROSITE:PS50042 GO:GO:0008773
eggNOG:COG2905 KO:K07182 InterPro:IPR018821 Pfam:PF10335
RefSeq:YP_271593.1 ProteinModelPortal:Q47UD0 STRING:Q47UD0
GeneID:3520231 KEGG:cps:CPS_4954 PATRIC:21472703
HOGENOM:HOG000277101 OMA:SMVRIRH
BioCyc:CPSY167879:GI48-4955-MONOMER Uniprot:Q47UD0
Length = 624
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 40/144 (27%), Positives = 62/144 (43%)
Query: 24 SENGGNLSKPPSPQXXXXXXXXXXXXXRTVKKLRLSKALTIPEGTIVSDACRRMASRRVD 83
S+N K Q +V S +I + A +M +
Sbjct: 136 SQNSAQRLKTKMSQVNEEAILSSTLMNTSVSNFYQSPVASISAEQTIQQAAVQMTEQGYS 195
Query: 84 A-VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQK 142
V+L + N + GIVTDKDI R +AEGL + V+S IMTR+ + + A +AL
Sbjct: 196 CLVVLENDNPV--GIVTDKDIRRRCVAEGLSTSE-VISAIMTRDMCTIDAKCNAYDALMM 252
Query: 143 MVQGKFRHLPVVENGEVIAILDIT 166
M HLPV + ++ ++ +T
Sbjct: 253 MTAKHIHHLPVTKYDNLVGMVTVT 276
>UNIPROTKB|Q74BN1 [details] [associations]
symbol:GSU2010 "CBS domain pair-containing protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70
GO:GO:0008152 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000187907 KO:K04767 RefSeq:NP_953059.1
ProteinModelPortal:Q74BN1 GeneID:2688077 KEGG:gsu:GSU2010
PATRIC:22026881 OMA:TAREDSS ProtClustDB:CLSK924560
BioCyc:GSUL243231:GH27-2044-MONOMER Uniprot:Q74BN1
Length = 144
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
T V MT+NP+ + D+ IEA+ M + R LPV++ ++ IL
Sbjct: 2 TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGIL 48
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 222 TIITE--NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVV 276
T +TE N K V P + AA+ + + + N L+V + ++ GILT + L ++
Sbjct: 76 TSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALI 133
>TIGR_CMR|GSU_2010 [details] [associations]
symbol:GSU_2010 "CBS domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70 GO:GO:0008152
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000187907
KO:K04767 RefSeq:NP_953059.1 ProteinModelPortal:Q74BN1
GeneID:2688077 KEGG:gsu:GSU2010 PATRIC:22026881 OMA:TAREDSS
ProtClustDB:CLSK924560 BioCyc:GSUL243231:GH27-2044-MONOMER
Uniprot:Q74BN1
Length = 144
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
T V MT+NP+ + D+ IEA+ M + R LPV++ ++ IL
Sbjct: 2 TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGIL 48
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 222 TIITE--NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVV 276
T +TE N K V P + AA+ + + + N L+V + ++ GILT + L ++
Sbjct: 76 TSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALI 133
>UNIPROTKB|O06186 [details] [associations]
symbol:hrp1 "Hypoxic response protein 1" species:1773
"Mycobacterium tuberculosis" [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0052553 "modulation by symbiont of host immune response"
evidence=IDA] [GO:0052572 "response to host immune response"
evidence=IEP] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005576 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0046872 GO:GO:0001666
eggNOG:COG0517 HOGENOM:HOG000187907 GO:GO:0052553 PIR:A70573
RefSeq:NP_217142.1 RefSeq:NP_337203.1 RefSeq:YP_006516069.1
PDB:1XKF PDB:1Y5H PDBsum:1XKF PDBsum:1Y5H ProteinModelPortal:O06186
SMR:O06186 PRIDE:O06186 EnsemblBacteria:EBMYCT00000001242
EnsemblBacteria:EBMYCT00000072169 GeneID:13319348 GeneID:888576
GeneID:925590 KEGG:mtc:MT2701 KEGG:mtu:Rv2626c KEGG:mtv:RVBD_2626c
PATRIC:18127682 TubercuList:Rv2626c OMA:LPICGED
ProtClustDB:CLSK791962 EvolutionaryTrace:O06186 Uniprot:O06186
Length = 143
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 35/142 (24%), Positives = 70/142 (49%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + + + E ++ A + M + A+ + + L G++TD+DI + +A G
Sbjct: 3 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
L P+ T + + R+ I+ + +I E L M + + R +PV+ ++ I+ DI +
Sbjct: 63 LDPN-TATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIAR 121
Query: 168 CLYD-AISRMEKAAEQGSAIAA 188
L + AI + KA A+A+
Sbjct: 122 HLPEHAIVQFVKAICSPMALAS 143
>UNIPROTKB|Q60B97 [details] [associations]
symbol:MCA0583 "CBS domain protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70
GO:GO:0008152 EMBL:AE017282 GenomeReviews:AE017282_GR
HOGENOM:HOG000187907 RefSeq:YP_113099.1 ProteinModelPortal:Q60B97
GeneID:3103691 KEGG:mca:MCA0583 PATRIC:22604930 OMA:LMRTHHV
ProtClustDB:CLSK747154 Uniprot:Q60B97
Length = 150
Score = 104 (41.7 bits), Expect = 0.00025, P = 0.00025
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 66 EGTIVSDACRRMASRRVDAVLLTD---ANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+ TIV +A + M + V +V++ + GI+TD+D+ ++AE + PD V +
Sbjct: 17 DDTIV-EAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLVVEILAEEVAPDAVTVGDV 75
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
M+ + E LQ+M R +PVV E G ++ I+
Sbjct: 76 MSFELVTAQEQDGLWETLQRMRAHGVRRIPVVDERGLLVGII 117
>UNIPROTKB|Q9KP53 [details] [associations]
symbol:VC_2523 "Arabinose 5-phosphate isomerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR001347
InterPro:IPR004800 Pfam:PF00571 Pfam:PF01380 PIRSF:PIRSF004692
PROSITE:PS51371 PROSITE:PS51464 SMART:SM00116 GO:GO:0005975
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0030246 GO:GO:0019146
TIGRFAMs:TIGR00393 KO:K06041 OMA:IEMSEKR PIR:A82065
RefSeq:NP_232152.1 ProteinModelPortal:Q9KP53 DNASU:2615187
GeneID:2615187 KEGG:vch:VC2523 PATRIC:20084073
ProtClustDB:CLSK874831 Uniprot:Q9KP53
Length = 326
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 26/97 (26%), Positives = 50/97 (51%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
++ DA ++ + + + D L GI TD D+ R++ + + TV++ +MTR P
Sbjct: 222 LIRDALLEISQKGLGMTAIVDEQDTLLGIFTDGDLR-RILDKRIDIHSTVIADVMTRQPT 280
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ LA+E L M + L +VEN +++ L++
Sbjct: 281 VAQPNLLAVEGLNLMQAKRINGLMLVENNKLVGALNM 317
>TIGR_CMR|VC_2523 [details] [associations]
symbol:VC_2523 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
InterPro:IPR001347 InterPro:IPR004800 Pfam:PF00571 Pfam:PF01380
PIRSF:PIRSF004692 PROSITE:PS51371 PROSITE:PS51464 SMART:SM00116
GO:GO:0005975 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0030246
GO:GO:0019146 TIGRFAMs:TIGR00393 KO:K06041 OMA:IEMSEKR PIR:A82065
RefSeq:NP_232152.1 ProteinModelPortal:Q9KP53 DNASU:2615187
GeneID:2615187 KEGG:vch:VC2523 PATRIC:20084073
ProtClustDB:CLSK874831 Uniprot:Q9KP53
Length = 326
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 26/97 (26%), Positives = 50/97 (51%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
++ DA ++ + + + D L GI TD D+ R++ + + TV++ +MTR P
Sbjct: 222 LIRDALLEISQKGLGMTAIVDEQDTLLGIFTDGDLR-RILDKRIDIHSTVIADVMTRQPT 280
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ LA+E L M + L +VEN +++ L++
Sbjct: 281 VAQPNLLAVEGLNLMQAKRINGLMLVENNKLVGALNM 317
>UNIPROTKB|Q71YF1 [details] [associations]
symbol:LMOf2365_1894 "CBS domain protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR018356 Pfam:PF00571
PROSITE:PS00894 PROSITE:PS51371 SMART:SM00116 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG0517 GO:GO:0005622
EMBL:AE017262 GenomeReviews:AE017262_GR InterPro:IPR013196
Pfam:PF08279 HOGENOM:HOG000039552 OMA:TKTNMTK
ProtClustDB:CLSK873004 InterPro:IPR016842 PIRSF:PIRSF026546
RefSeq:YP_014486.1 ProteinModelPortal:Q71YF1 STRING:Q71YF1
GeneID:2798176 KEGG:lmf:LMOf2365_1894 PATRIC:20325079
Uniprot:Q71YF1
Length = 205
Score = 109 (43.4 bits), Expect = 0.00044, P = 0.00044
Identities = 35/133 (26%), Positives = 69/133 (51%)
Query: 53 VKKLRLSKALTIP----EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
+++L+++ +T P + T V DA + + ++ + D + LL G+V+ KD+ +
Sbjct: 75 IRQLKVADIMTQPFFAKKETSVYDAIVMLFMEDIGSLYVVDED-LLVGLVSRKDLLKGAL 133
Query: 109 AEGLRPDQTVVSKIMTRNP--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD-- 164
A+ T ++ IMTR P + VT + + A +++V + LPV+EN +V+ +
Sbjct: 134 ADA-DTKATPIATIMTRMPNLVTVTKNDTVLHAAEQLVFHQIDSLPVLENTKVVGKISKT 192
Query: 165 -ITKCLYDAISRM 176
IT D I ++
Sbjct: 193 RITALFVDTIKKV 205
>UNIPROTKB|Q483T6 [details] [associations]
symbol:CPS_1950 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_268680.1 ProteinModelPortal:Q483T6
STRING:Q483T6 GeneID:3521556 KEGG:cps:CPS_1950 PATRIC:21467035
OMA:KVIDPGE BioCyc:CPSY167879:GI48-2020-MONOMER Uniprot:Q483T6
Length = 131
Score = 95 (38.5 bits), Expect = 0.00054, P = 0.00054
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 53 VKKLRLSKALTIPEGTI-VSDACRRMASRRVDAVLLTDANALLS-GIVTDKDITTRVIAE 110
VK + + +G + V++ + + A+++ N G+V DI V+A+
Sbjct: 8 VKDVMTTNNYQFADGMMTVAEGIKLAKEHNISALIINKRNEQDEYGLVMLADIAKEVLAK 67
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHL-PVVENGEVIAILDITKCL 169
PD+ + +IMT+ + V D + + ++ + HL PV+EN +I ++D T +
Sbjct: 68 DRSPDRVNLYEIMTKPLVSVLPD-MDVRYCARLFERLSIHLAPVIENKNIIGMVDYTNMV 126
Query: 170 YDAI 173
+ +
Sbjct: 127 FSQV 130
>TIGR_CMR|CPS_1950 [details] [associations]
symbol:CPS_1950 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_268680.1 ProteinModelPortal:Q483T6
STRING:Q483T6 GeneID:3521556 KEGG:cps:CPS_1950 PATRIC:21467035
OMA:KVIDPGE BioCyc:CPSY167879:GI48-2020-MONOMER Uniprot:Q483T6
Length = 131
Score = 95 (38.5 bits), Expect = 0.00054, P = 0.00054
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 53 VKKLRLSKALTIPEGTI-VSDACRRMASRRVDAVLLTDANALLS-GIVTDKDITTRVIAE 110
VK + + +G + V++ + + A+++ N G+V DI V+A+
Sbjct: 8 VKDVMTTNNYQFADGMMTVAEGIKLAKEHNISALIINKRNEQDEYGLVMLADIAKEVLAK 67
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHL-PVVENGEVIAILDITKCL 169
PD+ + +IMT+ + V D + + ++ + HL PV+EN +I ++D T +
Sbjct: 68 DRSPDRVNLYEIMTKPLVSVLPD-MDVRYCARLFERLSIHLAPVIENKNIIGMVDYTNMV 126
Query: 170 YDAI 173
+ +
Sbjct: 127 FSQV 130
>UNIPROTKB|Q3AFS5 [details] [associations]
symbol:CHY_0137 "CBS/GGDEF domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR001054
InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
Pfam:PF00990 Gene3D:3.20.20.70 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
TIGRFAMs:TIGR00254 PROSITE:PS50887 RefSeq:YP_359009.1
ProteinModelPortal:Q3AFS5 STRING:Q3AFS5 GeneID:3727538
KEGG:chy:CHY_0137 PATRIC:21273467 HOGENOM:HOG000262568 OMA:EIAIIFL
BioCyc:CHYD246194:GJCN-137-MONOMER Uniprot:Q3AFS5
Length = 271
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+ V+++ +TI + DA M S+R+ + + + N L GI+T KD+
Sbjct: 3 KQVREVMTRNPVTIEPYRSLWDAKELMRSQRIGGLPVVE-NEKLIGIITSKDLI------ 55
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILD---IT 166
P+ +V MT P+ + + +A QKM++ LPV+ E+G + I+ I
Sbjct: 56 -FYPENRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITRKVIE 114
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIE 209
+ + I M ++ AI ++ +ER G+ S AFI+
Sbjct: 115 RYIGSYIDSMTGLPKKEYAIYKCLKLLER--GN--SCTVAFID 153
>TIGR_CMR|CHY_0137 [details] [associations]
symbol:CHY_0137 "CBS/GGDEF domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR001054
InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
Pfam:PF00990 Gene3D:3.20.20.70 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
TIGRFAMs:TIGR00254 PROSITE:PS50887 RefSeq:YP_359009.1
ProteinModelPortal:Q3AFS5 STRING:Q3AFS5 GeneID:3727538
KEGG:chy:CHY_0137 PATRIC:21273467 HOGENOM:HOG000262568 OMA:EIAIIFL
BioCyc:CHYD246194:GJCN-137-MONOMER Uniprot:Q3AFS5
Length = 271
Score = 111 (44.1 bits), Expect = 0.00055, P = 0.00055
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+ V+++ +TI + DA M S+R+ + + + N L GI+T KD+
Sbjct: 3 KQVREVMTRNPVTIEPYRSLWDAKELMRSQRIGGLPVVE-NEKLIGIITSKDLI------ 55
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILD---IT 166
P+ +V MT P+ + + +A QKM++ LPV+ E+G + I+ I
Sbjct: 56 -FYPENRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITRKVIE 114
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIE 209
+ + I M ++ AI ++ +ER G+ S AFI+
Sbjct: 115 RYIGSYIDSMTGLPKKEYAIYKCLKLLER--GN--SCTVAFID 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.129 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 294 271 0.00098 114 3 10 22 0.49 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 611 (65 KB)
Total size of DFA: 211 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.54u 0.45s 28.99t Elapsed: 00:00:02
Total cpu time: 28.55u 0.45s 29.00t Elapsed: 00:00:02
Start: Thu May 9 21:21:36 2013 End: Thu May 9 21:21:38 2013