BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041090
(294 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296082621|emb|CBI21626.3| unnamed protein product [Vitis vinifera]
Length = 556
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/293 (80%), Positives = 255/293 (87%), Gaps = 11/293 (3%)
Query: 10 SQKRAPST-SKRTSSSENGGNLSKPPSPQGESS----------SSVGGAGGERTVKKLRL 58
SQKR PST SK+ +ENG + +K SP SS S G G RTVKKLRL
Sbjct: 16 SQKRGPSTASKKAVLAENGSSNAKASSPTQISSDIFWVGLDYLSFDGLVDGVRTVKKLRL 75
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SKALTIPEGT VSDACRRMA+RRVDAVLLTD+NALLSGIVTDKDI TRVIAE LRP+QTV
Sbjct: 76 SKALTIPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTV 135
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
VSKIMTR+PIFV SDSLAIEAL+KMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK
Sbjct: 136 VSKIMTRHPIFVNSDSLAIEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 195
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
AAE GSAIAAAVEGVERQWGSNF+APY+FIETLRERMFKP+LSTII EN KVAIVSPSDP
Sbjct: 196 AAEHGSAIAAAVEGVERQWGSNFTAPYSFIETLRERMFKPALSTIIAENTKVAIVSPSDP 255
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
++VAAKKMRE+R NS +I+TGSKIQGILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 256 ISVAAKKMREYRVNSVIIMTGSKIQGILTSKDILMRVVAQNLSPELTLVEKVM 308
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+S A ++M RV++V++ + + GI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 256 ISVAAKKMREYRVNSVIIMTGSKI-QGILTSKDILMRVVAQNLSPELTLVEKVMTPNPEC 314
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
T ++ ++AL M GKF HLPVV+ +G + A +D+ + + AIS +E ++ + +
Sbjct: 315 ATLETTILDALHIMHDGKFLHLPVVDKDGGIAACVDVLQITHAAISMVENSSGAVNEVTN 374
Query: 189 AVEGVERQWGSNFS 202
+ +++ W S +
Sbjct: 375 TI--MQKFWDSTLA 386
>gi|225438337|ref|XP_002272502.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Vitis
vinifera]
Length = 539
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/283 (81%), Positives = 251/283 (88%), Gaps = 8/283 (2%)
Query: 10 SQKRAPST-SKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGT 68
SQKR PST SK+ +ENG + +K SP G RTVKKLRLSKALTIPEGT
Sbjct: 16 SQKRGPSTASKKAVLAENGSSNAKASSP-------THLVDGVRTVKKLRLSKALTIPEGT 68
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
VSDACRRMA+RRVDAVLLTD+NALLSGIVTDKDI TRVIAE LRP+QTVVSKIMTR+PI
Sbjct: 69 TVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPI 128
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
FV SDSLAIEAL+KMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE GSAIAA
Sbjct: 129 FVNSDSLAIEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEHGSAIAA 188
Query: 189 AVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMRE 248
AVEGVERQWGSNF+APY+FIETLRERMFKP+LSTII EN KVAIVSPSDP++VAAKKMRE
Sbjct: 189 AVEGVERQWGSNFTAPYSFIETLRERMFKPALSTIIAENTKVAIVSPSDPISVAAKKMRE 248
Query: 249 FRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+R NS +I+TGSKIQGILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 249 YRVNSVIIMTGSKIQGILTSKDILMRVVAQNLSPELTLVEKVM 291
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+S A ++M RV++V++ + + GI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 239 ISVAAKKMREYRVNSVIIMTGSKI-QGILTSKDILMRVVAQNLSPELTLVEKVMTPNPEC 297
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
T ++ ++AL M GKF HLPVV+ +G + A +D+ + + AIS +E ++ + +
Sbjct: 298 ATLETTILDALHIMHDGKFLHLPVVDKDGGIAACVDVLQITHAAISMVENSSGAVNEVTN 357
Query: 189 AVEGVERQWGSNFS 202
+ +++ W S +
Sbjct: 358 TI--MQKFWDSTLA 369
>gi|118489093|gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 555
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/313 (76%), Positives = 261/313 (83%), Gaps = 27/313 (8%)
Query: 1 MSSQGG------SRRSQKRAPSTSKRTSSS------ENGG----------NLSKPPSPQG 38
MSSQ G + +QKR PST+++ SSS ENGG N SKP SP
Sbjct: 1 MSSQMGPPPPKRTSLTQKRGPSTARKLSSSSASLASENGGTTTTNISQVGNSSKPSSPNA 60
Query: 39 ESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIV 98
SS GGERTVKKL+LSKALTIPEGT V DACRRMA+RRV+AVLLTDANALLSGIV
Sbjct: 61 PSS-----VGGERTVKKLKLSKALTIPEGTTVFDACRRMAARRVNAVLLTDANALLSGIV 115
Query: 99 TDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE 158
TDKDI+ RVIAEGLRP+ T+VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE
Sbjct: 116 TDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE 175
Query: 159 VIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKP 218
VIA+LDIT+CLYDAISRMEKAAEQGSAIAAAVEGVERQWG+NF+APYAFIETLRERMFKP
Sbjct: 176 VIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQWGNNFTAPYAFIETLRERMFKP 235
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
SLSTII E +KVAI SPSDPV A KKMRE R NS ++VTG+KIQGILTSKD+LMRVVAQ
Sbjct: 236 SLSTIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIVVTGNKIQGILTSKDILMRVVAQ 295
Query: 279 NLSPELTLVERFI 291
NLSPELTLVE+ +
Sbjct: 296 NLSPELTLVEKVM 308
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A ++M RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 256 VYAATKKMRELRVNSVIVVTGNKI-QGILTSKDILMRVVAQNLSPELTLVEKVMTLNPEC 314
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
VT ++ ++AL M GKF HLPVV+ +G V A LD+ + + AIS +E ++ G+
Sbjct: 315 VTLETTILDALHVMHDGKFLHLPVVDKDGSVAACLDVLQITHAAISLVESSS--GAVNDV 372
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 373 ANTMMQKFWDS 383
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R N+ L+ + + GI+T KD+ RV+A+ L PE T+V + + R
Sbjct: 90 ACRRMAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTR 142
>gi|449457321|ref|XP_004146397.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Cucumis
sativus]
Length = 539
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/273 (82%), Positives = 245/273 (89%), Gaps = 8/273 (2%)
Query: 23 SSENG----GNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMA 78
S +NG GN+ KP SP S++V GERTVKKLRLSKALTIPEGT VS+ACRRMA
Sbjct: 28 SGDNGISSNGNVPKPGSPTQLPSAAV----GERTVKKLRLSKALTIPEGTTVSEACRRMA 83
Query: 79 SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE 138
+RRVDAVLLTDANALLSGI+TDKD+ TRVIAEGLRP+QTVVSKIMTRNPIFVTSDSLA+E
Sbjct: 84 ARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTRNPIFVTSDSLAME 143
Query: 139 ALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG 198
ALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG
Sbjct: 144 ALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG 203
Query: 199 SNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVT 258
S+FSAPYAFIETLRERMFKPSLSTI++EN K AIVS SDP+ VAAKKMRE R NS +I
Sbjct: 204 SDFSAPYAFIETLRERMFKPSLSTILSENTKAAIVSASDPIYVAAKKMRELRVNSVVITM 263
Query: 259 GSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
G+KIQGILTSKD+LMRVVA NLSPELTLVE+ +
Sbjct: 264 GTKIQGILTSKDILMRVVAHNLSPELTLVEKVM 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T + GI+T KDI RV+A L P+ T+V K+MT NP T
Sbjct: 247 AAKKMRELRVNSVVITMGTKI-QGILTSKDILMRVVAHNLSPELTLVEKVMTPNPECATV 305
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV++ G V+A +D+ + + AIS +E + + +A+ +
Sbjct: 306 ETTILDALHIMHDGKFLHLPVLDREGLVVACVDVLQITHAAISMVESGSSSVNDVASTM- 364
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 365 -MQKFWDS 371
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
V+ A ++M R ++ L+ + + GILT KDV RV+A+ L PE T+V + + R
Sbjct: 75 VSEACRRMAARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTR 130
>gi|449519605|ref|XP_004166825.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSCBSPB3-like [Cucumis sativus]
Length = 539
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/273 (81%), Positives = 244/273 (89%), Gaps = 8/273 (2%)
Query: 23 SSENG----GNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMA 78
S +NG GN+ KP SP S++V GERTVKKLRLSKALTIPEGT VS+ACRRMA
Sbjct: 28 SGDNGISSNGNVPKPGSPTQLPSAAV----GERTVKKLRLSKALTIPEGTTVSEACRRMA 83
Query: 79 SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE 138
+RRVDAVLLTDANALLSGI+TDKD+ TRVIAEGLRP+QTVVSKIMTRNPIFVTSDSLA+E
Sbjct: 84 ARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTRNPIFVTSDSLAME 143
Query: 139 ALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG 198
ALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG
Sbjct: 144 ALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG 203
Query: 199 SNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVT 258
S+FSAPYAFIETLRERMFKPSLSTI++EN K AIVS SDP+ VA +KMRE R NS +I
Sbjct: 204 SDFSAPYAFIETLRERMFKPSLSTILSENTKAAIVSASDPIYVAXQKMRELRVNSVVITM 263
Query: 259 GSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
G+KIQGILTSKD+LMRVVA NLSPELTLVE+ +
Sbjct: 264 GTKIQGILTSKDILMRVVAHNLSPELTLVEKVM 296
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T + GI+T KDI RV+A L P+ T+V K+MT NP T
Sbjct: 247 AXQKMRELRVNSVVITMGTKI-QGILTSKDILMRVVAHNLSPELTLVEKVMTPNPECATV 305
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV++ G V+A +D+ + + AIS +E + + +A+ +
Sbjct: 306 ETTILDALHIMHDGKFLHLPVLDREGLVVACVDVLQITHAAISMVESGSSSVNDVASTM- 364
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 365 -MQKFWDS 371
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
V+ A ++M R ++ L+ + + GILT KDV RV+A+ L PE T+V + + R
Sbjct: 75 VSEACRRMAARRVDAVLLTDANALLSGILTDKDVATRVIAEGLRPEQTVVSKIMTR 130
>gi|42565877|ref|NP_190863.3| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|334185937|ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75263848|sp|Q9LF97.1|Y3295_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB3
gi|7529719|emb|CAB86899.1| putative protein [Arabidopsis thaliana]
gi|332645495|gb|AEE79016.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|332645496|gb|AEE79017.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 556
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/295 (76%), Positives = 255/295 (86%), Gaps = 6/295 (2%)
Query: 2 SSQGGSRRSQ--KRAPSTSKRTSSSENG---GNLSKPPSPQGESSSSVGGAGGERTVKKL 56
SS G R + +R P SK+ SENG GN SKP S S + GERTVKKL
Sbjct: 9 SSTSGRRSNSTVRRGPPPSKKPVQSENGSVNGNTSKPNS-PPPQPQSQAPSNGERTVKKL 67
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
RLSKALTIPEGT V DACRRMA+RRVDA LLTD++ALLSGIVTDKD+ TRVIAEGLRPDQ
Sbjct: 68 RLSKALTIPEGTTVFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQ 127
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T+VSK+MTRNPIFVTSDSLA+EALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRM
Sbjct: 128 TLVSKVMTRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRM 187
Query: 177 EKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPS 236
EKAAEQGSA+AAAVEGVE+QWGS +SAPYAFIETLRERMFKP+LSTIIT+N+KVA+V+PS
Sbjct: 188 EKAAEQGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPS 247
Query: 237 DPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
DPV+VAAK+MR+ R NS +I TG+KI GILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 248 DPVSVAAKRMRDLRVNSVIISTGNKISGILTSKDILMRVVAQNLSPELTLVEKVM 302
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS A +RM RV++V+++ N + SGI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 250 VSVAAKRMRDLRVNSVIISTGNKI-SGILTSKDILMRVVAQNLSPELTLVEKVMTPNPEC 308
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ ++ ++AL M GKF HLP+++ +G A +D+ + + AIS +E ++ G+
Sbjct: 309 ASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSS--GAVNDM 366
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 367 ANTMMQKFWDS 377
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KDV RV+A+ L P+ TLV + + R
Sbjct: 84 ACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTR 136
>gi|224093670|ref|XP_002309952.1| predicted protein [Populus trichocarpa]
gi|222852855|gb|EEE90402.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/243 (88%), Positives = 230/243 (94%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVKKLRLSKALTIPEGT VSDACRRMA+RRV+A LLTDANALLSGIVTDKDI+ RVI
Sbjct: 1 GERTVKKLRLSKALTIPEGTTVSDACRRMAARRVNAALLTDANALLSGIVTDKDISARVI 60
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
AEGLRPDQT+VSKIMTRNPIFV SDSLAIEALQKMVQGKFRHLPVVENGEVIA+LDITKC
Sbjct: 61 AEGLRPDQTIVSKIMTRNPIFVNSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDITKC 120
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAISRMEKAAEQGSAIAAAVEGVERQWG+NF+AP+ FIETLRERMFKPSLSTII E
Sbjct: 121 LYDAISRMEKAAEQGSAIAAAVEGVERQWGNNFTAPHTFIETLRERMFKPSLSTIIGEQT 180
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
KVA+ SPSDPV VAAKKMRE R NSA++VTG+KIQGILTSKD+LMRVVAQNLSPELTLVE
Sbjct: 181 KVAVASPSDPVYVAAKKMRELRVNSAIVVTGNKIQGILTSKDILMRVVAQNLSPELTLVE 240
Query: 289 RFI 291
+ +
Sbjct: 241 KVM 243
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++ ++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP VT
Sbjct: 194 AAKKMRELRVNSAIVVTGNKI-QGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECVTL 252
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV++ +G A +D+ + + AIS +E ++ G+ AA
Sbjct: 253 ETTVLDALHVMHDGKFLHLPVLDKDGSAAACVDVLQITHAAISMVESSS--GAVNDAAST 310
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 311 MMQKFWDS 318
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
V+ A ++M R N+AL+ + + GI+T KD+ RV+A+ L P+ T+V + + R
Sbjct: 22 VSDACRRMAARRVNAALLTDANALLSGIVTDKDISARVIAEGLRPDQTIVSKIMTR 77
>gi|255574194|ref|XP_002528012.1| conserved hypothetical protein [Ricinus communis]
gi|223532581|gb|EEF34368.1| conserved hypothetical protein [Ricinus communis]
Length = 546
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 230/244 (94%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVKKLRLSKALTIPEGT VSDACRRMA+RRVDAVLLTDANALLSGIVTDKDI+ RV
Sbjct: 56 GGERTVKKLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDANALLSGIVTDKDISARV 115
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IAEGLRP+QT+VSKIMTRNPIFV SDSLAI+ALQKMVQGKFRHLPVVENGEVIA+LDITK
Sbjct: 116 IAEGLRPEQTIVSKIMTRNPIFVASDSLAIDALQKMVQGKFRHLPVVENGEVIALLDITK 175
Query: 168 CLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITEN 227
CLYDAISRMEK AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII E
Sbjct: 176 CLYDAISRMEKVAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIIGEQ 235
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
KVAI SPSDPV VAAK+MR+ + NS +IVTG+KIQGILTSKD+LMRVVA N+SPELTLV
Sbjct: 236 TKVAIASPSDPVYVAAKRMRDLQVNSVIIVTGNKIQGILTSKDILMRVVAHNISPELTLV 295
Query: 288 ERFI 291
E+ +
Sbjct: 296 EKVM 299
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A +RM +V++V++ N + GI+T KDI RV+A + P+ T+V K+MT NP T
Sbjct: 250 AAKRMRDLQVNSVIIVTGNKI-QGILTSKDILMRVVAHNISPELTLVEKVMTSNPECATL 308
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPVV+ +G A +D+ + + AIS +E ++ G+A A
Sbjct: 309 ETTILDALHIMHDGKFLHLPVVDKDGSATACVDVLQITHAAISMVENSS--GAANDVANT 366
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 367 MMQKFWDS 374
>gi|297816584|ref|XP_002876175.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297322013|gb|EFH52434.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 556
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/283 (78%), Positives = 248/283 (87%), Gaps = 4/283 (1%)
Query: 12 KRAPSTSKRTSSSENG---GNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGT 68
+R P SK+ SENG GN SKP S S + GERTVKKLRLSKALTIPEGT
Sbjct: 21 RRGPPPSKKPVQSENGSVNGNTSKPNS-PPPQPQSQAPSNGERTVKKLRLSKALTIPEGT 79
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+ DACRRMA+RRVDA LLTD++ALLSGIVTDKD+ TRVIAEGLRPDQT+VSK+MTRNPI
Sbjct: 80 TIFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPI 139
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
FVTSDSLA+EALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+AA
Sbjct: 140 FVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAA 199
Query: 189 AVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMRE 248
AVEGVE+QWGS +SAPYAFIETLRERMFKP+LSTIITEN+KVA+V+PSDPV+VAAK+MR+
Sbjct: 200 AVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITENSKVALVAPSDPVSVAAKRMRD 259
Query: 249 FRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
R NS +I G+KI GILTSKD+LMRVVAQNL PELTLVE+ +
Sbjct: 260 LRVNSVIISNGNKIHGILTSKDILMRVVAQNLPPELTLVEKVM 302
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS A +RM RV++V++++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 250 VSVAAKRMRDLRVNSVIISNGNKI-HGILTSKDILMRVVAQNLPPELTLVEKVMTPNPEC 308
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ ++ ++AL M GKF HLP+++ +G A +D+ + + AIS +E ++ G+
Sbjct: 309 ASLETTILDALHIMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSS--GAVNDM 366
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 367 ANTMMQKFWDS 377
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KDV RV+A+ L P+ TLV + + R
Sbjct: 84 ACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTR 136
>gi|297612744|ref|NP_001066263.2| Os12g0169400 [Oryza sativa Japonica Group]
gi|77553133|gb|ABA95929.1| CBS domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|255670087|dbj|BAF29282.2| Os12g0169400 [Oryza sativa Japonica Group]
Length = 542
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/292 (73%), Positives = 240/292 (82%), Gaps = 15/292 (5%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNL-------SKPPSPQGESSSSVGGAGGERTVKKLRLS 59
SRR++ R PS S R S + SKP SP G GERTV+KLRLS
Sbjct: 11 SRRTRSRPPSASSRKSDDPSAAAANGNGKASSKPTSP--------GQLTGERTVRKLRLS 62
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
KALTIPEGT VS+ACRRMA+RRVDAVLLTDA LLSGIVTDKD+ TRV+AEGLR +QT++
Sbjct: 63 KALTIPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIM 122
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
SKIMTRNP + SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKA
Sbjct: 123 SKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKA 182
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
AEQGSAIAAAVEGVERQ G NFSAPYAFIETLRERMFKPSLSTI+TE KVAIVSPSDPV
Sbjct: 183 AEQGSAIAAAVEGVERQLGGNFSAPYAFIETLRERMFKPSLSTIVTEGTKVAIVSPSDPV 242
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VA +KMREFR NS ++ TG+ +QGI TSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 243 YVATQKMREFRVNSVVVATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVM 294
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N L GI T KD+ RV+A+ L P+ T+V K+MT NP F T
Sbjct: 245 ATQKMREFRVNSVVVATGNTL-QGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATL 303
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PV++ G++ A LD+ + + AI +E + + +A V
Sbjct: 304 DTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVEGGNDTVNDVANTV- 362
Query: 192 GVERQWGSNFS 202
++R W S +
Sbjct: 363 -MQRFWDSTLA 372
>gi|222616703|gb|EEE52835.1| hypothetical protein OsJ_35364 [Oryza sativa Japonica Group]
Length = 543
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/292 (73%), Positives = 240/292 (82%), Gaps = 15/292 (5%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNL-------SKPPSPQGESSSSVGGAGGERTVKKLRLS 59
SRR++ R PS S R S + SKP SP G GERTV+KLRLS
Sbjct: 11 SRRTRSRPPSASSRKSDDPSAAAANGNGKASSKPTSP--------GQLTGERTVRKLRLS 62
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
KALTIPEGT VS+ACRRMA+RRVDAVLLTDA LLSGIVTDKD+ TRV+AEGLR +QT++
Sbjct: 63 KALTIPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIM 122
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
SKIMTRNP + SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKA
Sbjct: 123 SKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKA 182
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
AEQGSAIAAAVEGVERQ G NFSAPYAFIETLRERMFKPSLSTI+TE KVAIVSPSDPV
Sbjct: 183 AEQGSAIAAAVEGVERQLGGNFSAPYAFIETLRERMFKPSLSTIVTEGTKVAIVSPSDPV 242
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VA +KMREFR NS ++ TG+ +QGI TSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 243 YVATQKMREFRVNSVVVATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVM 294
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N L GI T KD+ RV+A+ L P+ T+V K+MT NP F T
Sbjct: 245 ATQKMREFRVNSVVVATGNTL-QGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATL 303
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISR-MEKAAEQGSAIAAAV 190
D+ ++AL M GKF H+PV++ G++ A LD+ + + AI +E + + +A V
Sbjct: 304 DTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVVEGGNDTVNDVANTV 363
Query: 191 EGVERQWGSNFS 202
++R W S +
Sbjct: 364 --MQRFWDSTLA 373
>gi|218186500|gb|EEC68927.1| hypothetical protein OsI_37618 [Oryza sativa Indica Group]
Length = 543
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/292 (73%), Positives = 240/292 (82%), Gaps = 15/292 (5%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNL-------SKPPSPQGESSSSVGGAGGERTVKKLRLS 59
SRR++ R PS S R S + SKP SP G GERTV+KLRLS
Sbjct: 11 SRRTRSRPPSASSRKSDDPSAAAANGNGKASSKPTSP--------GQLTGERTVRKLRLS 62
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
KALTIPEGT VS+ACRRMA+RRVDAVLLTDA LLSGIVTDKD+ TRV+AEGLR +QT++
Sbjct: 63 KALTIPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVTDKDVATRVVAEGLRVEQTIM 122
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
SKIMTRNP + SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKA
Sbjct: 123 SKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKA 182
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
AEQGSAIAAAVEGVERQ G NFSAPYAFIETLRERMFKPSLS+I+TE KVAIVSPSDPV
Sbjct: 183 AEQGSAIAAAVEGVERQLGGNFSAPYAFIETLRERMFKPSLSSIVTEGTKVAIVSPSDPV 242
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VA +KMREFR NS ++ TG+ +QGI TSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 243 YVATQKMREFRVNSVVVATGNTLQGIFTSKDLLMRVVAQNLSPELTLVEKVM 294
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N L GI T KD+ RV+A+ L P+ T+V K+MT NP F T
Sbjct: 245 ATQKMREFRVNSVVVATGNTL-QGIFTSKDLLMRVVAQNLSPELTLVEKVMTVNPDFATL 303
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISR-MEKAAEQGSAIAAAV 190
D+ ++AL M GKF H+PV++ G++ A LD+ + + AI +E + + +A V
Sbjct: 304 DTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVVEGGNDTVNDVANTV 363
Query: 191 EGVERQWGSNFS 202
++R W S +
Sbjct: 364 --MQRFWDSTLA 373
>gi|357520151|ref|XP_003630364.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
gi|355524386|gb|AET04840.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
Length = 534
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/293 (75%), Positives = 251/293 (85%), Gaps = 10/293 (3%)
Query: 4 QGGSRR---SQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
G +RR + ++ PS SK+ ENG + PS + S S+ GGERTVKKLRLSK
Sbjct: 2 NGLTRRNSGTHRKPPSMSKKF---ENG--IHSEPSSKPSSPPSLESDGGERTVKKLRLSK 56
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
ALTI EGT VSDACRRMA+RRVDAVLLTDANALLSGI+TDKDI TRVIAEGLRPDQT+V+
Sbjct: 57 ALTISEGTSVSDACRRMAARRVDAVLLTDANALLSGIMTDKDIATRVIAEGLRPDQTMVA 116
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
K+MTRNP+FVTSD+LAI+ALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA
Sbjct: 117 KVMTRNPLFVTSDTLAIDALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 176
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA 240
EQGSAIAAAVEG ERQ GSN SAP A ++TLRER+F+PSLST+I+EN KVAI S +DPV
Sbjct: 177 EQGSAIAAAVEGAERQRGSNASAPNALLDTLRERIFRPSLSTLISENTKVAIASAADPVY 236
Query: 241 VAAKKMREFRSNSALIV--TGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VAAKKMRE R NSA+IV +G+KIQGILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 237 VAAKKMRELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVM 289
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
Query: 73 ACRRMASRRVD-AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
A ++M RV+ AV+++ + + GI+T KDI RV+A+ L P+ T+V K+MT NP T
Sbjct: 238 AAKKMRELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCAT 297
Query: 132 SDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAV 190
D+ ++AL M GKF HLPVV+ +G V A +D+ + + AIS +E ++ + +A +
Sbjct: 298 LDTTILDALHMMHDGKFLHLPVVDRHGYVAACVDVLQITHAAISLVESSSGAVNDVANTI 357
Query: 191 EGVERQWGSNFS 202
+++ W S F+
Sbjct: 358 --MQKFWDSAFA 367
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTL 286
+K +S V+ A ++M R ++ L+ + + GI+T KD+ RV+A+ L P+ T+
Sbjct: 55 SKALTISEGTSVSDACRRMAARRVDAVLLTDANALLSGIMTDKDIATRVIAEGLRPDQTM 114
Query: 287 VERFIMR 293
V + + R
Sbjct: 115 VAKVMTR 121
>gi|357157411|ref|XP_003577789.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like
[Brachypodium distachyon]
Length = 556
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/261 (79%), Positives = 228/261 (87%), Gaps = 8/261 (3%)
Query: 31 SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
SKP SP A GERTVKKLRLSKALTIPEGT VS+ACRRMA+RRVDAVLLTDA
Sbjct: 55 SKPASPNH--------AAGERTVKKLRLSKALTIPEGTTVSEACRRMAARRVDAVLLTDA 106
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N LLSGIVTDKD+ TRVIAEGLR + T++SKIMTRNP++V+SD+LAIEALQKMVQGKFRH
Sbjct: 107 NGLLSGIVTDKDVATRVIAEGLRVEHTIISKIMTRNPLYVSSDTLAIEALQKMVQGKFRH 166
Query: 151 LPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET 210
LPVVENGEVIA+LDI KC+YDAISR+EKAAEQGSA+AAAVEGVERQ G NF+APYA IET
Sbjct: 167 LPVVENGEVIAMLDIAKCMYDAISRLEKAAEQGSALAAAVEGVERQLGGNFTAPYALIET 226
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
LRERMFKPSLSTIITEN KVA VS SDPV VAA+KMRE R NS +I G+ +QGI TSKD
Sbjct: 227 LRERMFKPSLSTIITENTKVATVSLSDPVYVAAQKMRELRVNSVVITNGNSLQGIFTSKD 286
Query: 271 VLMRVVAQNLSPELTLVERFI 291
VLMRVVAQNLSPELTLVE+ +
Sbjct: 287 VLMRVVAQNLSPELTLVEKVM 307
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T+ N+L GI T KD+ RV+A+ L P+ T+V K+MT +P T
Sbjct: 258 AAQKMRELRVNSVVITNGNSL-QGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATL 316
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PVV+ +G V+A LD+ + + AIS E + +A V
Sbjct: 317 DTSILDALHIMHDGKFLHIPVVDGDGRVVACLDVLQLTHAAISMAEGGPGAANDVANTV- 375
Query: 192 GVERQWGSNFS 202
++ W S +
Sbjct: 376 -MQNFWDSALA 385
>gi|326524536|dbj|BAK00651.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 559
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/293 (73%), Positives = 241/293 (82%), Gaps = 16/293 (5%)
Query: 7 SRRSQKRAPSTSKRTSSSE--------NGGNLSKPPSPQGESSSSVGGAGGERTVKKLRL 58
+RR++ R PS + S + NG SKP SP GERTVKKLRL
Sbjct: 27 NRRTRSRPPSAASSRKSDDPSAAAANGNGKVPSKPTSPNH--------VAGERTVKKLRL 78
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SKALTIPEGT +S+ACRRMA+RRVDAVLLTD N LLSGIVTDKDI TRVIAEGLR +QT+
Sbjct: 79 SKALTIPEGTTLSEACRRMAARRVDAVLLTDVNGLLSGIVTDKDIATRVIAEGLRVEQTI 138
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
+SKIMTR+P +VT+D+LAIEALQKMVQGKFRHLPVV+NGEVIA+LDI KCLYDAISR+EK
Sbjct: 139 ISKIMTRSPHYVTADTLAIEALQKMVQGKFRHLPVVDNGEVIAMLDIAKCLYDAISRLEK 198
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
AAEQGSA+AAAVEGVERQ GSNFSAP IET+RERMFKPSLSTIITE+ KVAIVSPSDP
Sbjct: 199 AAEQGSALAAAVEGVERQLGSNFSAPSTLIETIRERMFKPSLSTIITESTKVAIVSPSDP 258
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V VAA+KMRE R NS +I TG+ +QGI TSKDVLMRVVAQNLSPELTLVE+ +
Sbjct: 259 VYVAAQKMRELRVNSVVITTGNLLQGIFTSKDVLMRVVAQNLSPELTLVEKVM 311
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T N LL GI T KD+ RV+A+ L P+ T+V K+MT +P T
Sbjct: 262 AAQKMRELRVNSVVITTGN-LLQGIFTSKDVLMRVVAQNLSPELTLVEKVMTAHPDCATL 320
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PVV+ +G V+A LD+ + AIS E + G+A A
Sbjct: 321 DTSILDALHIMHDGKFLHIPVVDGDGRVVACLDVLQLTQAAISMAEGGS--GAANDVANT 378
Query: 192 GVERQWGSNFS 202
+++ W S +
Sbjct: 379 MMQKFWDSALA 389
>gi|414868430|tpg|DAA46987.1| TPA: hypothetical protein ZEAMMB73_412952 [Zea mays]
Length = 529
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 243/293 (82%), Gaps = 17/293 (5%)
Query: 8 RRSQKRAPSTSKRTS-----SSENG-GN---LSKPPSPQGESSSSVGGAGGERTVKKLRL 58
RR++ R PS S R S ++ NG GN +KP SP + GERTVKKLRL
Sbjct: 12 RRTRSRPPSASSRKSDDSSAAAANGNGNRKVATKPASPHQLT--------GERTVKKLRL 63
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SKALTIPEGT V DACRRMA+RRVDAVLLTD LLSGIVTDKDI TRV+AEGLR +QT+
Sbjct: 64 SKALTIPEGTTVLDACRRMAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTI 123
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
+SKIMTRNP++V SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLY+AI+R+EK
Sbjct: 124 MSKIMTRNPVYVMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYEAIARLEK 183
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
AAEQGSAIAAAVEGVERQ G NFSAP A IETLRERMFKPSLSTI+TEN KVAIVSP+DP
Sbjct: 184 AAEQGSAIAAAVEGVERQLGGNFSAPSALIETLRERMFKPSLSTIVTENTKVAIVSPTDP 243
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V VAA+KMREF NS ++ TG+ +QGI TSKD+LMRVV+QN+SPELTLVE+ +
Sbjct: 244 VCVAAQKMREFCVNSVVVSTGNTLQGIFTSKDILMRVVSQNISPELTLVEKVM 296
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A ++M V++V+++ N L GI T KDI RV+++ + P+ T+V K+MT NP
Sbjct: 244 VCVAAQKMREFCVNSVVVSTGNTL-QGIFTSKDILMRVVSQNISPELTLVEKVMTVNPDC 302
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
T ++ ++ L M GKF H+PV++ +G++ A LD+ + + I +E + +A
Sbjct: 303 ATLETTILDTLHIMHDGKFLHIPVIDKDGQIAACLDVLQLTHATIQLVEGGNGTVNNVAN 362
Query: 189 AVEGVERQWGS 199
+V ++R W S
Sbjct: 363 SV--MQRFWDS 371
>gi|226501428|ref|NP_001148069.1| CBS domain containing protein [Zea mays]
gi|195615614|gb|ACG29637.1| CBS domain containing protein [Zea mays]
gi|223947611|gb|ACN27889.1| unknown [Zea mays]
gi|414868431|tpg|DAA46988.1| TPA: CBS domain containing protein [Zea mays]
Length = 545
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 243/293 (82%), Gaps = 17/293 (5%)
Query: 8 RRSQKRAPSTSKRTS-----SSENG-GN---LSKPPSPQGESSSSVGGAGGERTVKKLRL 58
RR++ R PS S R S ++ NG GN +KP SP + GERTVKKLRL
Sbjct: 12 RRTRSRPPSASSRKSDDSSAAAANGNGNRKVATKPASPHQLT--------GERTVKKLRL 63
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SKALTIPEGT V DACRRMA+RRVDAVLLTD LLSGIVTDKDI TRV+AEGLR +QT+
Sbjct: 64 SKALTIPEGTTVLDACRRMAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTI 123
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
+SKIMTRNP++V SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLY+AI+R+EK
Sbjct: 124 MSKIMTRNPVYVMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYEAIARLEK 183
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
AAEQGSAIAAAVEGVERQ G NFSAP A IETLRERMFKPSLSTI+TEN KVAIVSP+DP
Sbjct: 184 AAEQGSAIAAAVEGVERQLGGNFSAPSALIETLRERMFKPSLSTIVTENTKVAIVSPTDP 243
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V VAA+KMREF NS ++ TG+ +QGI TSKD+LMRVV+QN+SPELTLVE+ +
Sbjct: 244 VCVAAQKMREFCVNSVVVSTGNTLQGIFTSKDILMRVVSQNISPELTLVEKVM 296
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M V++V+++ N L GI T KDI RV+++ + P+ T+V K+MT NP T
Sbjct: 247 AAQKMREFCVNSVVVSTGNTL-QGIFTSKDILMRVVSQNISPELTLVEKVMTVNPDCATL 305
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++ L M GKF H+PV++ +G++ A LD+ + + I +E + +A +V
Sbjct: 306 ETTILDTLHIMHDGKFLHIPVIDKDGQIAACLDVLQLTHATIQLVEGGNGTVNNVANSV- 364
Query: 192 GVERQWGSNFS 202
++R W S +
Sbjct: 365 -MQRFWDSALA 374
>gi|326523955|dbj|BAJ96988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 553
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/290 (73%), Positives = 245/290 (84%), Gaps = 8/290 (2%)
Query: 7 SRRSQKRAPSTSKR-----TSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKA 61
+RR++ R PS S R +S++ N + SP+ S + + G ERTVKKLRLSKA
Sbjct: 18 ARRTRSRPPSASSRRSEDPSSAAAANANGNGKTSPKLASPNHLPG---ERTVKKLRLSKA 74
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTIPEGT V DA RRMA+RRVDAVLLTDA LLSGIVTDKDI+TRVIAEGLR +QT++SK
Sbjct: 75 LTIPEGTTVYDASRRMAARRVDAVLLTDAQGLLSGIVTDKDISTRVIAEGLRVEQTIMSK 134
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMTRNP +V++DSLAIEALQKMVQGKFRHLPVVENGEV+A+LDI KCLYDAI+R+EKAAE
Sbjct: 135 IMTRNPTYVSADSLAIEALQKMVQGKFRHLPVVENGEVMAMLDIAKCLYDAIARLEKAAE 194
Query: 182 QGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
QGSAIAAAVEGVERQ G NF+APYAFIETLRERMFKPSLSTI+TE KVAI+SPSDPV V
Sbjct: 195 QGSAIAAAVEGVERQLGGNFTAPYAFIETLRERMFKPSLSTIVTEGTKVAIISPSDPVYV 254
Query: 242 AAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A +KMREFR NS ++ TG+ +QGI TSKDVLMRVV+QNLSPELTLVE+ +
Sbjct: 255 ATQKMREFRVNSVVVTTGNTVQGIFTSKDVLMRVVSQNLSPELTLVEKVM 304
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T N + GI T KD+ RV+++ L P+ T+V K+MT NP T
Sbjct: 255 ATQKMREFRVNSVVVTTGNTV-QGIFTSKDVLMRVVSQNLSPELTLVEKVMTANPDCATL 313
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PV++ G++ A LD+ + + AI +E + +A +V
Sbjct: 314 DTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVEGGNGTANDVANSV- 372
Query: 192 GVERQWGSNFS 202
++R W S +
Sbjct: 373 -MQRFWDSALA 382
>gi|242084930|ref|XP_002442890.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
gi|241943583|gb|EES16728.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
Length = 549
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/297 (71%), Positives = 239/297 (80%), Gaps = 21/297 (7%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNL-------------SKPPSPQGESSSSVGGAGGERTVK 54
RR++ R PS S R S + SKP SP + GERTVK
Sbjct: 12 RRTRSRPPSASSRKSDDPSAAAAAAAANGNGNGKAASKPASPNQLT--------GERTVK 63
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
KLRLSKALTIPEGT VSDACRRMA+RRVDAVLLTDA+ LLSGIVTDKDI TRVIAEGLR
Sbjct: 64 KLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDAHGLLSGIVTDKDIATRVIAEGLRV 123
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
+QT++SKIMTRNPI+V SD+ AIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAIS
Sbjct: 124 EQTIISKIMTRNPIYVMSDTPAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAIS 183
Query: 175 RMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVS 234
R+EKAAEQGSAIAAAVEGVE Q G NFS P A IETLRERMFKPSLSTI+TEN KVAIVS
Sbjct: 184 RLEKAAEQGSAIAAAVEGVECQLGGNFSVPSALIETLRERMFKPSLSTIVTENTKVAIVS 243
Query: 235 PSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
P+DPV VAA+KMREFR NS ++ TG+ +QGI TSKD+LMRVV+QN+SP+LTLVE+ +
Sbjct: 244 PTDPVYVAAQKMREFRVNSVVVATGNTLQGIFTSKDILMRVVSQNISPDLTLVEKVM 300
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N L GI T KDI RV+++ + PD T+V K+MT NP T
Sbjct: 251 AAQKMREFRVNSVVVATGNTL-QGIFTSKDILMRVVSQNISPDLTLVEKVMTANPDCATL 309
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF H+PV++ +G++ A LD+ + + I +E + +A +V
Sbjct: 310 ETTILDALHIMHDGKFLHIPVIDKDGQIAACLDVLQLTHATIQLVEGGNGTVNDVANSV- 368
Query: 192 GVERQWGSNFS 202
++R W S +
Sbjct: 369 -MQRFWDSALA 378
>gi|357160673|ref|XP_003578839.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like
[Brachypodium distachyon]
Length = 543
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/242 (83%), Positives = 222/242 (91%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ERTVKKLRLSKALTIPEGT V DA RRMA+RRVDAVLLTDA LLSGIVTDKDI+TRVIA
Sbjct: 53 ERTVKKLRLSKALTIPEGTTVYDASRRMATRRVDAVLLTDAQGLLSGIVTDKDISTRVIA 112
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
EGLR +QT++SKIMTRNP +VTSDSLAIEALQKMVQGKFRHLPVVENGEV+A+LDI KCL
Sbjct: 113 EGLRVEQTIMSKIMTRNPTYVTSDSLAIEALQKMVQGKFRHLPVVENGEVMAMLDIAKCL 172
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAK 229
YDAI+R+EKAAEQGSAIAAAVEGVERQ G NF+APYAFIETLRERMFKPSLSTI+TE K
Sbjct: 173 YDAIARLEKAAEQGSAIAAAVEGVERQLGGNFTAPYAFIETLRERMFKPSLSTIVTEGTK 232
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VAIVSPSDPV VA ++MREFR NS ++ TG+ +QGI TSKDVLMRVV+QNLSPELTLVE+
Sbjct: 233 VAIVSPSDPVYVATQQMREFRVNSVVVTTGNTVQGIFTSKDVLMRVVSQNLSPELTLVEK 292
Query: 290 FI 291
+
Sbjct: 293 VM 294
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++T N + GI T KD+ RV+++ L P+ T+V K+MT NP T
Sbjct: 245 ATQQMREFRVNSVVVTTGNTV-QGIFTSKDVLMRVVSQNLSPELTLVEKVMTANPDCATL 303
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PV++ G++ A LD+ + + AI +E + +A +V
Sbjct: 304 DTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTHAAIQLVEGGNGAANDVANSV- 362
Query: 192 GVERQWGSNFS 202
++R W S +
Sbjct: 363 -MQRFWDSALA 372
>gi|15227986|ref|NP_181191.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75265956|sp|Q9SJQ5.1|Y2650_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB2
gi|4581150|gb|AAD24634.1| hypothetical protein [Arabidopsis thaliana]
gi|330254170|gb|AEC09264.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 536
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 227/263 (86%), Gaps = 10/263 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N SKP SP + S GERTVKKLRLSKALTI EGT V DACRRMA+RRVDAVLLT
Sbjct: 43 NTSKPDSPLAQPVSD-----GERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLT 97
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
D++ALLSGIVTDKDI TRVIAEGLRP+ T+VSK+MTRNPIFVTSDSLAIEALQKMVQGKF
Sbjct: 98 DSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLAIEALQKMVQGKF 157
Query: 149 RHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFI 208
RHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+A AVE ER WG S +AFI
Sbjct: 158 RHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERHWG---SGNFAFI 212
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
+TLRERMFKP+LSTI+TEN KVA+VS SDPV VA+KKMR+ R NS +I G+KI GILTS
Sbjct: 213 DTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTS 272
Query: 269 KDVLMRVVAQNLSPELTLVERFI 291
KD+LMRVVAQNLSPELTLVE+ +
Sbjct: 273 KDILMRVVAQNLSPELTLVEKVM 295
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 246 ASKKMRDLRVNSVIIAVGNKI-HGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASI 304
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV + +G +A LD+ + + AIS +E + G+ A
Sbjct: 305 ETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAISTVENNS-SGAVNDMANT 363
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 364 MMQKFWDS 371
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KD+ RV+A+ L PE TLV + + R
Sbjct: 82 ACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTR 134
>gi|297823463|ref|XP_002879614.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325453|gb|EFH55873.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 536
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/263 (77%), Positives = 228/263 (86%), Gaps = 10/263 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N+SKP SP + S GERTVKKLRLSKALTI EGT V DACRRMA+RRVDAVLLT
Sbjct: 43 NISKPDSPLAQPVSD-----GERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLT 97
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
D++ALLSGIVTDKDI TRVIAEGLRP+ T+VSK+MTRNPIFVTSDSLAIEALQKMVQGKF
Sbjct: 98 DSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLAIEALQKMVQGKF 157
Query: 149 RHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFI 208
RHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+A AVE ER WG S +AFI
Sbjct: 158 RHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERHWG---SGNFAFI 212
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
+TLRERMFKP+LSTI+TEN KVA+VS SDPV VA+K+MR+ R NS +I G+KI GILTS
Sbjct: 213 DTLRERMFKPALSTIVTENTKVALVSASDPVFVASKRMRDLRVNSVIIAVGNKIHGILTS 272
Query: 269 KDVLMRVVAQNLSPELTLVERFI 291
KD+LMRVVAQNLSPELTLVE+ +
Sbjct: 273 KDILMRVVAQNLSPELTLVEKVM 295
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A +RM RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 246 ASKRMRDLRVNSVIIAVGNKI-HGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASI 304
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV++ +G +A LD+ + + AIS +E + G+ A
Sbjct: 305 ETTILDALHIMHDGKFLHLPVLDKDGFAVACLDVLQITHAAISTVENNS-SGAVNEMANT 363
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 364 MMQKFWDS 371
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KD+ RV+A+ L PE TLV + + R
Sbjct: 82 ACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTR 134
>gi|356527022|ref|XP_003532113.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 535
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/246 (82%), Positives = 226/246 (91%), Gaps = 3/246 (1%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVKKLRLSKALTI E T VS+ACRRMA+RRVDAVLLTD+NALLSGI+TDKDI TRV
Sbjct: 45 GGERTVKKLRLSKALTISEVTTVSEACRRMATRRVDAVLLTDSNALLSGIMTDKDIATRV 104
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IAEGLRP+QT+VSK+MTR+PIFVTSD LA+EALQKMVQGKFRHLPVVENGEVIAILDIT+
Sbjct: 105 IAEGLRPEQTMVSKVMTRSPIFVTSDMLALEALQKMVQGKFRHLPVVENGEVIAILDITR 164
Query: 168 CLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITEN 227
CLYDAI+RME+AAEQGSAIAAAVEGVER GSN SA A IETL+ERMFKPSLST++ EN
Sbjct: 165 CLYDAITRMERAAEQGSAIAAAVEGVERHRGSNVSAS-ALIETLKERMFKPSLSTLMGEN 223
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV--TGSKIQGILTSKDVLMRVVAQNLSPELT 285
KVAI SP+DPV VAAKKMR+ R NSA+IV +G+KIQGILTSKD+LMRVVAQNLSPELT
Sbjct: 224 TKVAIASPADPVYVAAKKMRDLRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELT 283
Query: 286 LVERFI 291
LVE+ +
Sbjct: 284 LVEKVM 289
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 83/132 (62%), Gaps = 4/132 (3%)
Query: 73 ACRRMASRRVD-AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
A ++M RV+ AV+++ + + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 238 AAKKMRDLRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCAS 297
Query: 132 SDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAV 190
D+ ++AL M GKF HLPVV+ +G V+A +D+ + + AIS +E ++ + +A +
Sbjct: 298 IDTTILDALHMMHDGKFLHLPVVDKDGYVVACMDVLQITHAAISMVESSSGAVNDVANTI 357
Query: 191 EGVERQWGSNFS 202
+++ W S F+
Sbjct: 358 --MQKFWDSAFN 367
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTL 286
+K +S V+ A ++M R ++ L+ + + + GI+T KD+ RV+A+ L PE T+
Sbjct: 56 SKALTISEVTTVSEACRRMATRRVDAVLLTDSNALLSGIMTDKDIATRVIAEGLRPEQTM 115
Query: 287 VERFIMR 293
V + + R
Sbjct: 116 VSKVMTR 122
>gi|356512874|ref|XP_003525140.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 535
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/283 (74%), Positives = 236/283 (83%), Gaps = 8/283 (2%)
Query: 11 QKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIV 70
KR PS SK+ ENG P G GERTVKKLRLSKALTI E T V
Sbjct: 13 HKRPPSLSKKL---ENGSLSEPPSKASSPPPQEFDG--GERTVKKLRLSKALTISEVTTV 67
Query: 71 SDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFV 130
S+ACRRMA+RRVDAVLLTD+N LLSGI+TDKDI TRVIAEGLRP+QT+VSK+MTR+PIFV
Sbjct: 68 SEACRRMAARRVDAVLLTDSNVLLSGIMTDKDIATRVIAEGLRPEQTMVSKVMTRSPIFV 127
Query: 131 TSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAV 190
TSD+LA+EALQKMVQGKFRHLPVVENGEVIAILDIT+CLYDAI+RMEKAAEQGSAIAAAV
Sbjct: 128 TSDTLALEALQKMVQGKFRHLPVVENGEVIAILDITRCLYDAITRMEKAAEQGSAIAAAV 187
Query: 191 EGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFR 250
EGVER GSN SA A IE LRERMFKPSLST++ EN KVAI SP+DPV VAA+KMR+ R
Sbjct: 188 EGVERHRGSNVSAS-ALIEALRERMFKPSLSTLMGENTKVAIASPADPVYVAARKMRDLR 246
Query: 251 SNSALIV--TGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
NSA+IV +G+KIQGILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 247 VNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVM 289
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 83/132 (62%), Gaps = 4/132 (3%)
Query: 73 ACRRMASRRVD-AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
A R+M RV+ AV+++ + + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 238 AARKMRDLRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPDCAS 297
Query: 132 SDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAV 190
D+ +++L M GKF HLPVV+ +G V+A +D+ + + AIS +E ++ + +A +
Sbjct: 298 VDTTILDSLHMMHDGKFLHLPVVDKDGYVVACMDVLQITHAAISMVESSSGAVNDVANTI 357
Query: 191 EGVERQWGSNFS 202
+++ W S F+
Sbjct: 358 --MQKFWDSAFN 367
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKI--QGILTSKDVLMRVVAQNLSPELT 285
+K +S V+ A ++M R + A+++T S + GI+T KD+ RV+A+ L PE T
Sbjct: 56 SKALTISEVTTVSEACRRMAARRVD-AVLLTDSNVLLSGIMTDKDIATRVIAEGLRPEQT 114
Query: 286 LVERFIMR 293
+V + + R
Sbjct: 115 MVSKVMTR 122
>gi|28973655|gb|AAO64148.1| unknown protein [Arabidopsis thaliana]
Length = 536
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 226/263 (85%), Gaps = 10/263 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N SKP SP + S GERTVKKLRLSKALTI EGT V DACRRMA+RRVDAVLLT
Sbjct: 43 NTSKPDSPLAQPVSD-----GERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLT 97
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
D++ALLSGIVTDKDI TRVIAEGLRP+ T VSK+MTRNPIFVTSDSLAIEALQKMVQGKF
Sbjct: 98 DSSALLSGIVTDKDIATRVIAEGLRPEHTPVSKVMTRNPIFVTSDSLAIEALQKMVQGKF 157
Query: 149 RHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFI 208
RHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+A AVE ER WG S +AFI
Sbjct: 158 RHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERHWG---SGNFAFI 212
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
+TLRERMFKP+LSTI+TEN KVA+VS SDPV VA+KKMR+ R NS +I G+KI GILTS
Sbjct: 213 DTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTS 272
Query: 269 KDVLMRVVAQNLSPELTLVERFI 291
KD+LMRVVAQNLSPELTLVE+ +
Sbjct: 273 KDILMRVVAQNLSPELTLVEKVM 295
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 246 ASKKMRDLRVNSVIIAVGNKI-HGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASI 304
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV + +G +A LD+ + + AIS +E + G+ A
Sbjct: 305 ETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAISTVENNS-SGAVNDMANT 363
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 364 MMQKFWDS 371
>gi|414588468|tpg|DAA39039.1| TPA: hypothetical protein ZEAMMB73_855016 [Zea mays]
Length = 539
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/289 (70%), Positives = 235/289 (81%), Gaps = 10/289 (3%)
Query: 3 SQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKAL 62
S SRRS P+ + ++++ NG +K SP A GERTVKKLRLSKAL
Sbjct: 19 SAASSRRSDD--PTAAVASTANGNGNVPTKAASPDH--------ASGERTVKKLRLSKAL 68
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TIPEGT +S+ACRRMA+RRVDAVLLTDA LLSGIVTDKDI TRVIAEGLR +QT++SKI
Sbjct: 69 TIPEGTTISEACRRMAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKI 128
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MTRNP++V D+ AIEALQKM+QGKFRHLPVVENGEVIA+LDITKCLYDAISR+EKAAEQ
Sbjct: 129 MTRNPLYVMGDTPAIEALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRLEKAAEQ 188
Query: 183 GSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVA 242
SA+AAAVEGVERQ G NFSAP+ IET+RERMFKPSLSTIITEN KVA VS SDPV VA
Sbjct: 189 ESALAAAVEGVERQLGGNFSAPHNLIETMRERMFKPSLSTIITENTKVATVSLSDPVCVA 248
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A+KMRE + NS +I G+ + GI T +DVLMRVVAQNLSPELTLVE+ +
Sbjct: 249 ARKMRELQVNSVIITAGNLLHGIFTPRDVLMRVVAQNLSPELTLVEKVM 297
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M +V++V++T N LL GI T +D+ RV+A+ L P+ T+
Sbjct: 234 TKVATVSLSDPVCVAARKMRELQVNSVIITAGN-LLHGIFTPRDVLMRVVAQNLSPELTL 292
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAIS 174
V K+MT +P T D+ ++AL M GKF H+PV++ +G V A LD+ + + AIS
Sbjct: 293 VEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGDGRVAACLDVLQLTHAAIS 349
>gi|357464823|ref|XP_003602693.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
gi|355491741|gb|AES72944.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
Length = 519
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 238/275 (86%), Gaps = 13/275 (4%)
Query: 18 SKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRM 77
SK++ ++ENG KPPSP SS G GGERTVKK++LSKALTIP+GT V+DACRRM
Sbjct: 10 SKKSHAAENGN--GKPPSP-----SSQPGDGGERTVKKVKLSKALTIPDGTTVTDACRRM 62
Query: 78 ASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAI 137
A+RRVDAVLLTD++ALLSGI+TDKD+ TRV+AEGL PD+T VSK+MTRNPIFVTSD+LAI
Sbjct: 63 AARRVDAVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVTSDTLAI 122
Query: 138 EALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI-AAAVEGVERQ 196
+ALQKM+QGKFRHLPVVENGEVIAILDITKCLYDAI+R+EKA++QGSAI AAAVEGVE Q
Sbjct: 123 DALQKMIQGKFRHLPVVENGEVIAILDITKCLYDAIARVEKASQQGSAIAAAAVEGVEHQ 182
Query: 197 WGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
AP AFI+TLRERMFKPSLSTI+ EN KVAI S SDPV VAAK+M+E R +S++I
Sbjct: 183 -----RAPNAFIDTLRERMFKPSLSTILGENTKVAITSASDPVHVAAKRMQELRVSSSVI 237
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VT +KIQGILTSKD+LMRV+A NLSPE TLVE+ +
Sbjct: 238 VTENKIQGILTSKDILMRVMAPNLSPESTLVEKVM 272
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A +RM RV + ++ N + GI+T KDI RV+A L P+ T+V K+MT NP T
Sbjct: 223 AAKRMQELRVSSSVIVTENKI-QGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATL 281
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ I+AL M GKF HLPVV+ +G V+A +D+ + + AIS +E ++ G+ A
Sbjct: 282 ETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLVE-SSSSGNVNDVAST 340
Query: 192 GVERQWGSNFS 202
+++ W S F+
Sbjct: 341 IMQKFWDSAFA 351
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
V A ++M R ++ L+ S + GILT KDV RVVA+ LSP+ T V + + R
Sbjct: 55 VTDACRRMAARRVDAVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTR 110
>gi|413925448|gb|AFW65380.1| hypothetical protein ZEAMMB73_586556 [Zea mays]
Length = 545
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/261 (75%), Positives = 220/261 (84%), Gaps = 8/261 (3%)
Query: 31 SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
+KP SP S GERTVKKLRLSKALTI EGT VS+ACRRMA+RRVDAVLLTDA
Sbjct: 46 TKPASPDHTS--------GERTVKKLRLSKALTIAEGTTVSEACRRMAARRVDAVLLTDA 97
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
LLSGIVTDKDI TRVIAEGLR +QT++SKIMTRNP +V +D+ AIEAL KMVQGKFRH
Sbjct: 98 GGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPSYVMADTPAIEALHKMVQGKFRH 157
Query: 151 LPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET 210
LPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+AAA+EGVERQ G NFS P+ +ET
Sbjct: 158 LPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAIEGVERQLGGNFSGPHNLLET 217
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
LRERMFKPSLSTIITEN KVA VS SDPV VA +KMR+ R NS +I+ G+ + GI TSKD
Sbjct: 218 LRERMFKPSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSLHGIFTSKD 277
Query: 271 VLMRVVAQNLSPELTLVERFI 291
VLMRVVAQNLSPELTLVE+ +
Sbjct: 278 VLMRVVAQNLSPELTLVEKVM 298
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++ N+L GI T KD+ RV+A+ L P+ T+
Sbjct: 235 TKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL-HGIFTSKDVLMRVVAQNLSPELTL 293
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT +P T D+ ++AL M GKF H+PV++ +G+V A LD+ + + AIS +E
Sbjct: 294 VEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGDGQVAACLDVLQLTHAAISMVE 353
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAP 204
+ +A + +++ W S P
Sbjct: 354 GGPGGANDVANTI--MQKFWDSALEPP 378
>gi|413925447|gb|AFW65379.1| hypothetical protein ZEAMMB73_586556 [Zea mays]
Length = 388
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/261 (75%), Positives = 220/261 (84%), Gaps = 8/261 (3%)
Query: 31 SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
+KP SP S GERTVKKLRLSKALTI EGT VS+ACRRMA+RRVDAVLLTDA
Sbjct: 46 TKPASPDHTS--------GERTVKKLRLSKALTIAEGTTVSEACRRMAARRVDAVLLTDA 97
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
LLSGIVTDKDI TRVIAEGLR +QT++SKIMTRNP +V +D+ AIEAL KMVQGKFRH
Sbjct: 98 GGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPSYVMADTPAIEALHKMVQGKFRH 157
Query: 151 LPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET 210
LPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+AAA+EGVERQ G NFS P+ +ET
Sbjct: 158 LPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAIEGVERQLGGNFSGPHNLLET 217
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
LRERMFKPSLSTIITEN KVA VS SDPV VA +KMR+ R NS +I+ G+ + GI TSKD
Sbjct: 218 LRERMFKPSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSLHGIFTSKD 277
Query: 271 VLMRVVAQNLSPELTLVERFI 291
VLMRVVAQNLSPELTLVE+ +
Sbjct: 278 VLMRVVAQNLSPELTLVEKVM 298
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++ N+L GI T KD+ RV+A+ L P+ T+
Sbjct: 235 TKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL-HGIFTSKDVLMRVVAQNLSPELTL 293
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT +P T D+ ++AL M GKF H+PV++ +G+V A LD+ + + AIS +E
Sbjct: 294 VEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGDGQVAACLDVLQLTHAAISMVE 353
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLR 212
+ +A + +++ W S P ++ R
Sbjct: 354 GGPGGANDVANTI--MQKFWDSALEPPDEDFDSHR 386
>gi|356518812|ref|XP_003528071.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 525
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/244 (77%), Positives = 219/244 (89%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVKKLRLSKALTIP+GT VS+ACRRMA+RR+DAVLLTD+NALLSGI+TDKD+ TRV
Sbjct: 35 GGERTVKKLRLSKALTIPDGTTVSEACRRMAARRIDAVLLTDSNALLSGILTDKDVATRV 94
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
+AEGL+P++T VSK+MTRNPIFVTSD+LAI+ALQKM+QG+FRHLPVVENGEVIA+LDITK
Sbjct: 95 VAEGLKPEETTVSKVMTRNPIFVTSDTLAIDALQKMIQGRFRHLPVVENGEVIAMLDITK 154
Query: 168 CLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITEN 227
CLYDAISRME A +QGSA+AAAVEGVE Q SN SAP FIETLRER+FKPSLSTI+ EN
Sbjct: 155 CLYDAISRMESATQQGSAVAAAVEGVELQRTSNVSAPNTFIETLRERVFKPSLSTIVDEN 214
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
KVAI SDPV VAAKKMRE N+A+IV +KI+GILTSKD+LMRVVAQNLSPE L+
Sbjct: 215 TKVAIALVSDPVYVAAKKMRELHVNAAVIVMENKIKGILTSKDILMRVVAQNLSPESALL 274
Query: 288 ERFI 291
E+ +
Sbjct: 275 EKVM 278
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 69 IVSD----ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
+VSD A ++M V+A ++ N + GI+T KDI RV+A+ L P+ ++ K+MT
Sbjct: 221 LVSDPVYVAAKKMRELHVNAAVIVMENKI-KGILTSKDILMRVVAQNLSPESALLEKVMT 279
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQG 183
NP + ++ ++AL M GKF HLPVV+ +G IA LD+ + + AIS +E + G
Sbjct: 280 PNPECASLETTILDALHMMHNGKFLHLPVVDRDGNAIACLDVLQITHAAISLVESSP--G 337
Query: 184 SAIAAAVEGVERQWGSNFS 202
++ AA +++ W S F+
Sbjct: 338 ASNDAANTVMQKFWDSAFA 356
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
V+ A ++M R ++ L+ + + + GILT KDV RVVA+ L PE T V + + R
Sbjct: 57 VSEACRRMAARRIDAVLLTDSNALLSGILTDKDVATRVVAEGLKPEETTVSKVMTR 112
>gi|218185325|gb|EEC67752.1| hypothetical protein OsI_35274 [Oryza sativa Indica Group]
Length = 560
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/285 (69%), Positives = 231/285 (81%), Gaps = 2/285 (0%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
+RR++ R PS + S + ++ + E++ S A GERTVKKLRL+KA+TIPE
Sbjct: 9 NRRTRSRPPSVASSQKSDDPAAAVAAIST--AEATPSPSHAAGERTVKKLRLTKAVTIPE 66
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT V++AC+RMA+RRVDAVLLTDAN LLSGIVTDKDI RVIAEGLR +QT+ SKIMTR
Sbjct: 67 GTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRT 126
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P++V SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+
Sbjct: 127 PVYVMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAL 186
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAAVEGVERQ G N + IETLRERM KPSLSTII+EN KVAIVSP DPV VAA+KM
Sbjct: 187 AAAVEGVERQVGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKM 246
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
RE R NS +I G+ +QGI TSKDVLMRVV QNLSPELT VE+ +
Sbjct: 247 RELRVNSVVITAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVM 291
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A R+M RV++V++T N+L GI T KD+ RV+ + L P+ T V K+MT +P T
Sbjct: 242 AARKMRELRVNSVVITAGNSL-QGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATL 300
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PVV+ G V+A LD+ + + AIS +E E + +A +
Sbjct: 301 DTSILDALHIMHDGKFLHIPVVDGEGRVVACLDVLQITHAAISMVEGGPETTNDVANTI- 359
Query: 192 GVERQWGSNFS 202
+++ W S +
Sbjct: 360 -MQKFWDSALA 369
>gi|62701927|gb|AAX93000.1| CBS domain, putative [Oryza sativa Japonica Group]
Length = 575
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/285 (69%), Positives = 230/285 (80%), Gaps = 2/285 (0%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
+RR++ R PS + S + ++ + E++ S A GERTVKKLRL+KA+TIPE
Sbjct: 9 NRRTRSRPPSVASSQKSDDPAAAVAAIST--AEATPSPSHAAGERTVKKLRLTKAVTIPE 66
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT V++AC+RMA+RRVDAVLLTDAN LLSGIVTDKDI RVIAEGLR +QT+ SKIMTR
Sbjct: 67 GTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRT 126
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P++V SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+
Sbjct: 127 PVYVMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAL 186
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAAVEGVERQ G N + IETLRERM KPSLSTII+EN KVAIVSP DPV VAA+KM
Sbjct: 187 AAAVEGVERQVGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKM 246
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
E R NS +I G+ +QGI TSKDVLMRVV QNLSPELT VE+ +
Sbjct: 247 HELRVNSVVITAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVM 291
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A R+M RV++V++T N+L GI T KD+ RV+ + L P+ T V K+MT +P T
Sbjct: 242 AARKMHELRVNSVVITAGNSL-QGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATL 300
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAIS 174
D+ ++AL M GKF H+PVV+ G V+A LD+ + + AIS
Sbjct: 301 DTSILDALHIMRDGKFLHIPVVDGEGRVVACLDVLQITHAAIS 343
>gi|108864045|gb|ABA91621.2| CBS domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|215768686|dbj|BAH00915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615591|gb|EEE51723.1| hypothetical protein OsJ_33116 [Oryza sativa Japonica Group]
Length = 560
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/285 (69%), Positives = 230/285 (80%), Gaps = 2/285 (0%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
+RR++ R PS + S + ++ + E++ S A GERTVKKLRL+KA+TIPE
Sbjct: 9 NRRTRSRPPSVASSQKSDDPAAAVAAIST--AEATPSPSHAAGERTVKKLRLTKAVTIPE 66
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT V++AC+RMA+RRVDAVLLTDAN LLSGIVTDKDI RVIAEGLR +QT+ SKIMTR
Sbjct: 67 GTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIMTRT 126
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P++V SD+LAIEALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+
Sbjct: 127 PVYVMSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAL 186
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAAVEGVERQ G N + IETLRERM KPSLSTII+EN KVAIVSP DPV VAA+KM
Sbjct: 187 AAAVEGVERQVGDNLPDHSSVIETLRERMLKPSLSTIISENTKVAIVSPWDPVCVAARKM 246
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
E R NS +I G+ +QGI TSKDVLMRVV QNLSPELT VE+ +
Sbjct: 247 HELRVNSVVITAGNSLQGIFTSKDVLMRVVTQNLSPELTHVEKVM 291
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A R+M RV++V++T N+L GI T KD+ RV+ + L P+ T V K+MT +P T
Sbjct: 242 AARKMHELRVNSVVITAGNSL-QGIFTSKDVLMRVVTQNLSPELTHVEKVMTAHPECATL 300
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
D+ ++AL M GKF H+PVV+ G V+A LD+ + + AIS +E E + +A +
Sbjct: 301 DTSILDALHIMRDGKFLHIPVVDGEGRVVACLDVLQITHAAISMVEGGPETTNGVANTI- 359
Query: 192 GVERQWGSNFS 202
+++ W S +
Sbjct: 360 -MQKFWDSALA 369
>gi|356507428|ref|XP_003522469.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Glycine
max]
Length = 734
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/285 (69%), Positives = 230/285 (80%), Gaps = 21/285 (7%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
++R QK++ S R NG N PP GGERTVKKLRLSKALTIP+
Sbjct: 13 TKRHQKKSLSLPAR-----NGIN---PPDD-----------GGERTVKKLRLSKALTIPD 53
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT VS+ACRRMA+RR+DAVLLTD+NALL+GI+TDKD+ TRV+ EGL+P++T VSK+MTRN
Sbjct: 54 GTTVSEACRRMAARRIDAVLLTDSNALLAGILTDKDVATRVVTEGLKPEETTVSKVMTRN 113
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
PIFVTSD+LAI+ALQKM+QGKFRHLPVVENGEVIA+LDITKCLYDAISRME A + GSA+
Sbjct: 114 PIFVTSDTLAIDALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRMESATQHGSAV 173
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAAVEGVE Q SN AP FIETLRER+FKPSLSTI+ EN KVAI SDPV VAAKKM
Sbjct: 174 AAAVEGVELQQTSN--APNTFIETLRERVFKPSLSTIVDENTKVAIALASDPVYVAAKKM 231
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
RE NSA+IV +KIQGILTSKD+LMRVVAQNLSPE L+E+ +
Sbjct: 232 RELHVNSAVIVMENKIQGILTSKDILMRVVAQNLSPESALLEKVM 276
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M V++ ++ N + GI+T KDI RV+A+ L P+ ++ K+MT NP +
Sbjct: 227 AAKKMRELHVNSAVIVMENKI-QGILTSKDILMRVVAQNLSPESALLEKVMTPNPQCASL 285
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPVV+ +G V A LD+ + + AIS +E + G++ AA
Sbjct: 286 ETTILDALHMMHNGKFLHLPVVDRDGNVTACLDVLQITHAAISLVESSP--GASNDAANT 343
Query: 192 GVERQWGSNFS 202
+++ W S F+
Sbjct: 344 VMQKFWDSAFA 354
>gi|224081072|ref|XP_002306285.1| predicted protein [Populus trichocarpa]
gi|222855734|gb|EEE93281.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/215 (86%), Positives = 203/215 (94%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA+RRV+AVLLTDANALLSGIVTDKDI+ RVIAEGLRP+ T+VSKIMTRNPIFVTSDSLA
Sbjct: 1 MAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLA 60
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
IEALQKMVQGKFRHLPVVENGEVIA+LDIT+CLYDAISRMEKAAEQGSAIAAAVEGVERQ
Sbjct: 61 IEALQKMVQGKFRHLPVVENGEVIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQ 120
Query: 197 WGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
WG+NF+APYAFIETLRERMFKPSLSTII E +KVAI SPSDPV A KKMRE R NS ++
Sbjct: 121 WGNNFTAPYAFIETLRERMFKPSLSTIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIV 180
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
VTG+KIQGILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 181 VTGNKIQGILTSKDILMRVVAQNLSPELTLVEKVM 215
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A ++M RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 163 VYAATKKMRELRVNSVIVVTGNKI-QGILTSKDILMRVVAQNLSPELTLVEKVMTLNPEC 221
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
VT ++ ++AL M GKF HLPVV+ +G V A LD+ + + AIS +E ++ G+
Sbjct: 222 VTLETTILDALHVMHDGKFLHLPVVDKDGSVAACLDVLQITHAAISLVESSS--GAVNDV 279
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 280 ANTMMQKFWDS 290
>gi|22136010|gb|AAM91587.1| putative protein [Arabidopsis thaliana]
gi|23197824|gb|AAN15439.1| putative protein [Arabidopsis thaliana]
Length = 469
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/215 (84%), Positives = 206/215 (95%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA+RRVDA LLTD++ALLSGIVTDKD+ TRVIAEGLRPDQT+VSK+MTRNPIFVTSDSLA
Sbjct: 1 MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 60
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
+EALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+AAAVEGVE+Q
Sbjct: 61 LEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALAAAVEGVEKQ 120
Query: 197 WGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
WGS +SAPYAFIETLRERMFKP+LSTIIT+N+KVA+V+PSDPV+VAAK+MR+ R NS +I
Sbjct: 121 WGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSVAAKRMRDLRVNSVII 180
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
TG+KI GILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 181 STGNKISGILTSKDILMRVVAQNLSPELTLVEKVM 215
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS A +RM RV++V+++ N + SGI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 163 VSVAAKRMRDLRVNSVIISTGNKI-SGILTSKDILMRVVAQNLSPELTLVEKVMTPNPEC 221
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ ++ ++AL M GKF HLP+++ +G A +D+ + + AIS +E ++ G+
Sbjct: 222 ASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSS--GAVNDM 279
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 280 ANTMMQKFWDS 290
>gi|302783404|ref|XP_002973475.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
gi|300159228|gb|EFJ25849.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
Length = 545
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/289 (66%), Positives = 233/289 (80%), Gaps = 13/289 (4%)
Query: 3 SQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKAL 62
S G +S KR P+ +K+ SENG +L K S +GGERTVKKLRLSKAL
Sbjct: 6 SAGAGSKSSKRPPA-AKKKPISENG-SLRKTKS-----------SGGERTVKKLRLSKAL 52
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TIP+GT V+DACRRM +RRVDA LLTD+ A+L GI+TDKD+ TRVIAE LRPD+T+VSK+
Sbjct: 53 TIPDGTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKV 112
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT+NP+FV SD+LA++ALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAI+RMEKAAE+
Sbjct: 113 MTKNPVFVMSDALAVDALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAIARMEKAAEK 172
Query: 183 GSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVA 242
G+AIAAAV+ VERQWG+ ++ FI+TLRERMF+P+LST+I EN KVA VSPSD V A
Sbjct: 173 GNAIAAAVQDVERQWGNTLNSSSTFIDTLRERMFRPTLSTLINENTKVATVSPSDTVLTA 232
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+KMREFR NS +I +K QGILTSKDVLMRVVA NL+P+ T V++ +
Sbjct: 233 TRKMREFRVNSVIITINNKPQGILTSKDVLMRVVASNLAPDSTTVDKVM 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++T N GI+T KD+ RV+A L PD T
Sbjct: 218 TKVATVSPSDTVLTATRKMREFRVNSVIIT-INNKPQGILTSKDVLMRVVASNLAPDSTT 276
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRME 177
V K+MT NP VT ++ ++AL M GKF HLPVV+ ++A LD+ + + A++ +
Sbjct: 277 VDKVMTPNPECVTLETTIVDALHTMHDGKFLHLPVVDQENCIVACLDVLQLTHGAVATVG 336
Query: 178 KA-----AEQGSAIAAAVEGVERQWGSNFS 202
+E GS + +++ W S F+
Sbjct: 337 NVGGGTPSETGSTM------MQKFWDSAFA 360
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSK-IQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A ++M R ++AL+ + + GI+T KDV RV+A+NL P+ TLV + + +
Sbjct: 60 VADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVMTK 115
>gi|302809978|ref|XP_002986681.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
gi|300145569|gb|EFJ12244.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
Length = 545
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/289 (66%), Positives = 233/289 (80%), Gaps = 13/289 (4%)
Query: 3 SQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKAL 62
S G +S KR P+ +K+ SENG +L K S +GGERTVKKLRLSKAL
Sbjct: 6 SAGAGSKSSKRPPA-AKKKPISENG-SLRKTKS-----------SGGERTVKKLRLSKAL 52
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TIP+GT V+DACRRM +RRVDA LLTD+ A+L GI+TDKD+ TRVIAE LRPD+T+VSK+
Sbjct: 53 TIPDGTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKV 112
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT+NP+FV SD+LA++ALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAI+RMEKAAE+
Sbjct: 113 MTKNPVFVISDALAVDALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAIARMEKAAEK 172
Query: 183 GSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVA 242
G+AIAAAV+ VERQWG+ ++ FI+TLRERMF+P+LST+I EN KVA VSPSD V A
Sbjct: 173 GNAIAAAVQDVERQWGNTLNSSSTFIDTLRERMFRPTLSTLINENTKVATVSPSDTVLTA 232
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+KMREFR NS +I +K QGILTSKDVLMRVVA NL+P+ T V++ +
Sbjct: 233 TRKMREFRVNSVIITINNKPQGILTSKDVLMRVVASNLAPDSTTVDKVM 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++T N GI+T KD+ RV+A L PD T
Sbjct: 218 TKVATVSPSDTVLTATRKMREFRVNSVIIT-INNKPQGILTSKDVLMRVVASNLAPDSTT 276
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRME 177
V K+MT NP VT ++ ++AL M GKF HLPVV+ ++A LD+ + + A++ +
Sbjct: 277 VDKVMTPNPECVTLETTIVDALHTMHDGKFLHLPVVDQENCIVACLDVLQLTHGAVATVG 336
Query: 178 KA-----AEQGSAIAAAVEGVERQWGSNFS 202
+E GS + +++ W S F+
Sbjct: 337 NVGGGTPSETGSTM------MQKFWDSAFA 360
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSK-IQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A ++M R ++AL+ + + GI+T KDV RV+A+NL P+ TLV + + +
Sbjct: 60 VADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVMTK 115
>gi|297598372|ref|NP_001045471.2| Os01g0961200 [Oryza sativa Japonica Group]
gi|57899170|dbj|BAD87222.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
gi|57900300|dbj|BAD87133.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
gi|255674099|dbj|BAF07385.2| Os01g0961200 [Oryza sativa Japonica Group]
Length = 533
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 234/285 (82%), Gaps = 11/285 (3%)
Query: 10 SQKRAP---STSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S +RAP S + + +E N SKP SP V ERTVKKLRL+KALT+PE
Sbjct: 16 SLRRAPPPSSAAAKPEPNEKASN-SKPASP-------VQAPSPERTVKKLRLAKALTLPE 67
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T VS+ACRRMA +RVDA LLTD+N +LSGI+T +DI+ RVIAEGLRPD+T V+K MTRN
Sbjct: 68 ATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRVIAEGLRPDETNVAKAMTRN 127
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P+FV S+S AIEALQKMV+GKFRHLPVVE+GEVIA+LDITK LYDAISRMEKAAEQGSAI
Sbjct: 128 PVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITKFLYDAISRMEKAAEQGSAI 187
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAA+EGVERQWG++F P++FIE LR+++FKPSLSTIITEN V +VSPSDPV AAKKM
Sbjct: 188 AAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKM 247
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
RE+R NS +++TG+ + GILTSKD+++R+VAQ+LSP++TLVE+ +
Sbjct: 248 REYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEKVM 292
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N LL GI+T KD+ R++A+ L PD T+V K+MT NP T
Sbjct: 243 AAKKMREYRVNSVVVMTGNMLL-GILTSKDLVLRLVAQSLSPDVTLVEKVMTTNPDCATL 301
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGS 184
D+ +EAL M GK+ H+PV + NG++IA LD + + AIS +E A+E S
Sbjct: 302 DTSILEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAAISMVEGASEANS 354
>gi|222619917|gb|EEE56049.1| hypothetical protein OsJ_04848 [Oryza sativa Japonica Group]
Length = 895
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/283 (67%), Positives = 233/283 (82%), Gaps = 11/283 (3%)
Query: 10 SQKRAP---STSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S +RAP S + + +E N SKP SP V ERTVKKLRL+KALT+PE
Sbjct: 16 SLRRAPPPSSAAAKPEPNEKASN-SKPASP-------VQAPSPERTVKKLRLAKALTLPE 67
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T VS+ACRRMA +RVDA LLTD+N +LSGI+T +DI+ RVIAEGLRPD+T V+K MTRN
Sbjct: 68 ATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRVIAEGLRPDETNVAKAMTRN 127
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P+FV S+S AIEALQKMV+GKFRHLPVVE+GEVIA+LDITK LYDAISRMEKAAEQGSAI
Sbjct: 128 PVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITKFLYDAISRMEKAAEQGSAI 187
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAA+EGVERQWG++F P++FIE LR+++FKPSLSTIITEN V +VSPSDPV AAKKM
Sbjct: 188 AAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKM 247
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
RE+R NS +++TG+ + GILTSKD+++R+VAQ+LSP++TLVE+
Sbjct: 248 REYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEK 290
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
A ++M RV++V++ N LL GI+T KD+ R++A+ L PD T+V K+
Sbjct: 243 AAKKMREYRVNSVVVMTGNMLL-GILTSKDLVLRLVAQSLSPDVTLVEKV 291
>gi|413951480|gb|AFW84129.1| hypothetical protein ZEAMMB73_744710 [Zea mays]
Length = 545
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/295 (64%), Positives = 231/295 (78%), Gaps = 7/295 (2%)
Query: 4 QGGSRRSQKRAPSTS---KRTSSSENGGNLSKPPSPQGESSSSVGGAG----GERTVKKL 56
GG+ ++ PS+S +R +ENG PP + S+S G GERTVK+L
Sbjct: 2 DGGAGAGRRSVPSSSGFRRRVPPAENGHGHDAPPPSRRSSASLSRGHSTPLTGERTVKRL 61
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
RLSKALTIP+ T V +ACRRMASRRVDAVLLTD+NALL GI+TDKDITTRVIA L+ ++
Sbjct: 62 RLSKALTIPDHTTVHEACRRMASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEE 121
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T+VSK+MTRNP+FV +D+LA+EALQKMVQGKFRHLPVVENGEVIAILDI KCLYDAI+RM
Sbjct: 122 TLVSKVMTRNPVFVLADTLAVEALQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARM 181
Query: 177 EKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPS 236
E+AAE+G AIAAAVEGVE+ WG+ S P FIETLRERMF+PSLSTII+EN+KV V PS
Sbjct: 182 ERAAEKGKAIAAAVEGVEKHWGTAVSGPNNFIETLRERMFRPSLSTIISENSKVVTVVPS 241
Query: 237 DPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
D V A+KKM E + +SA++ SK GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 242 DTVLTASKKMLELKMSSAVVAIESKPGGILTSRDILMRVIAQNLPPESTTVEKVM 296
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P T+++ + + + + AV+ ++ GI+T +DI RVIA+ L P+ T
Sbjct: 233 SKVVTVVPSDTVLTASKKMLELKMSSAVVAIESKP--GGILTSRDILMRVIAQNLPPEST 290
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRM 176
V K+MT+ P + D+ ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 291 TVEKVMTQCPECASVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIATV 350
Query: 177 EKAAEQGSAIAAAVEGVERQWGSNFS 202
+ GS +A+ ++R W S S
Sbjct: 351 GNSGAAGSESTSAM--MQRFWDSAMS 374
>gi|255540203|ref|XP_002511166.1| conserved hypothetical protein [Ricinus communis]
gi|223550281|gb|EEF51768.1| conserved hypothetical protein [Ricinus communis]
Length = 545
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/294 (64%), Positives = 230/294 (78%), Gaps = 4/294 (1%)
Query: 1 MSSQGGSRR---SQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLR 57
M+SQGGS R S + S R SS+NG S + + +SS GG GERTVK+LR
Sbjct: 1 MASQGGSSRKSLSMTNSSSMLGRKKSSDNGL-ASSDSARKSFASSRPGGLTGERTVKRLR 59
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
LSKALT+PE T + +ACRRMA+RRVDA+LLTD+NALL GI+TDKDI TRVIA L ++T
Sbjct: 60 LSKALTVPETTTIQEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET 119
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
VSK+MTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME
Sbjct: 120 PVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 179
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSD 237
+AAE+G AIAAAVEGVE+ WG+ FS P FIETLRERMF+PSLSTI+ EN+KV V P++
Sbjct: 180 RAAEKGKAIAAAVEGVEKNWGTTFSGPNTFIETLRERMFRPSLSTILPENSKVVTVLPTE 239
Query: 238 PVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V KKM E RS+SA+++ K +GILTSKD+LMRV+AQNL + TL E+ +
Sbjct: 240 TVLAVTKKMLESRSSSAVVIVDQKPRGILTSKDILMRVIAQNLPSDSTLAEKVM 293
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P T+++ + + SR AV++ D GI+T KDI RVIA+ L D T
Sbjct: 230 SKVVTVLPTETVLAVTKKMLESRSSSAVVIVDQKP--RGILTSKDILMRVIAQNLPSDST 287
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRM 176
+ K+MT NP T D+ ++AL M GKF HLPV++ +G V+A++D+ + A++ +
Sbjct: 288 LAEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVLDRDGNVVAVVDVIHITHAAVATV 347
Query: 177 EKAAEQGSAIAAAVEGVERQWGS 199
A G AA +++ W S
Sbjct: 348 GSTA--GVNNEAASTMMQKFWDS 368
>gi|449440540|ref|XP_004138042.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cucumis
sativus]
gi|449520507|ref|XP_004167275.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Cucumis
sativus]
Length = 540
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/292 (64%), Positives = 230/292 (78%), Gaps = 3/292 (1%)
Query: 1 MSSQGGS-RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLS 59
M+SQGGS RRS +S+ + GN P + SSS GERTVK+LRLS
Sbjct: 1 MTSQGGSSRRSLSLTNMSSQGKKKAHENGNSDAPR--KSLSSSRSLQLTGERTVKRLRLS 58
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+ALT+PE T +S+ACRRMA+RRVDA+LLTD+NALL GI+TDKDI TRVIA G+ ++T V
Sbjct: 59 RALTVPESTTISEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIACGINLEETSV 118
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
SK+MTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+A
Sbjct: 119 SKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERA 178
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
AE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+PSLSTII EN K+ V P++ V
Sbjct: 179 AEKGKAIAAAVEGVEKSWGTSVSGPNTFIETLRERMFRPSLSTIIPENLKIVTVPPTETV 238
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+A KKM E R +SA++ SK QGILTSKD+LMR++AQNL P+ TLVE+ +
Sbjct: 239 LMATKKMLELRVSSAVVTVDSKPQGILTSKDILMRLIAQNLPPDSTLVEKVM 290
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K +T+P V A ++M RV + ++T ++ GI+T KDI R+IA+ L PD T+V
Sbjct: 228 KIVTVPPTETVLMATKKMLELRVSSAVVT-VDSKPQGILTSKDILMRLIAQNLPPDSTLV 286
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK 178
K+MT NP + D+ ++AL M GKF HLPVV+ +G V+A++D+ + A++ +
Sbjct: 287 EKVMTPNPECASIDTPIVDALHTMHDGKFLHLPVVDRDGNVVAVVDVIHITHAAVATVGN 346
Query: 179 AAEQGSAIAAAVEGVERQWGS 199
+ G+ A+++ +++ W S
Sbjct: 347 TSGVGNEAASSM--MQKFWDS 365
>gi|359473429|ref|XP_002265656.2| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Vitis
vinifera]
Length = 347
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 181/252 (71%), Positives = 204/252 (80%), Gaps = 7/252 (2%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVD 83
+ENG + +K SP G RTV KLRLSKAL IPEG VSDACR M++R+VD
Sbjct: 42 AENGSSDAKASSPTCL-------VYGVRTVNKLRLSKALMIPEGITVSDACRMMSARKVD 94
Query: 84 AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKM 143
VLLTD+NA+LSGIV DKDI TRVI E LRP+QT VSKIMTR+PI V SDSLAIEAL+KM
Sbjct: 95 VVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKIMTRHPILVNSDSLAIEALEKM 154
Query: 144 VQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
VQGKFRHLP+ ENGEVIA+LD TKCLYDAISRMEK AE GSAI A VEG ERQW SNFSA
Sbjct: 155 VQGKFRHLPIAENGEVIALLDFTKCLYDAISRMEKVAEHGSAIVATVEGAERQWESNFSA 214
Query: 204 PYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQ 263
PY+FIE LRE MFK +LSTII+EN KVAIVSPSDP++VAA KMRE+R NS + +TG +IQ
Sbjct: 215 PYSFIEMLREWMFKLALSTIISENTKVAIVSPSDPISVAATKMREYRVNSVISMTGIQIQ 274
Query: 264 GILTSKDVLMRV 275
GILTSK +LMRV
Sbjct: 275 GILTSKGILMRV 286
>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/285 (63%), Positives = 226/285 (79%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
SRRS A +R S ENG + + S S ++ GERTVK+LRLSKALTIP+
Sbjct: 15 SRRSISSAAGPRRRGPSMENGHDAAARRSSATISRNTTSTVTGERTVKRLRLSKALTIPD 74
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T V +ACRRMA+RRVDAVLLTD+NALL GI+TDKDITTRVIA L+ ++T VSK+MTRN
Sbjct: 75 HTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRN 134
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
P+FV D+LA+EALQKMVQGKFRHLPVV+NGEVIA+LDI KCLYDAI+RME+AAE+G AI
Sbjct: 135 PLFVLGDTLAVEALQKMVQGKFRHLPVVDNGEVIALLDIAKCLYDAIARMERAAEKGRAI 194
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
AAAVEGVE+ WG++ S P F+ETLRERMF+PSL+TII+EN+KVA V+P+D V A+KKM
Sbjct: 195 AAAVEGVEKHWGTSVSGPNTFVETLRERMFRPSLATIISENSKVATVAPTDTVLTASKKM 254
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
E + +SA++ +K GILTS+D+LMRV+AQNL PE T V + +
Sbjct: 255 LELKVSSAVVAIENKPGGILTSRDILMRVIAQNLPPESTTVGKVM 299
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK T+ V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T
Sbjct: 236 SKVATVAPTDTVLTASKKMLELKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTT 294
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT++P T D+ +EAL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 295 VGKVMTQSPECATIDTPILEALHTMHDGKFLHLPVLDRDGSVVTVVDVLHITHAAIATVG 354
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSA 203
+ GS +++ ++R W S S+
Sbjct: 355 NSGATGSEATSSM--MQRFWDSAMSS 378
>gi|359491097|ref|XP_003634219.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 2
[Vitis vinifera]
gi|297734436|emb|CBI15683.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/293 (63%), Positives = 231/293 (78%), Gaps = 5/293 (1%)
Query: 1 MSSQGGS-RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVG-GAGGERTVKKLRL 58
M+S GGS R+S + + + +SENG P S + +S+ G GERTVK+LRL
Sbjct: 1 MASHGGSSRKSLTLSMPSQGKKKASENGAG---PDSARKSLASARSMGLTGERTVKRLRL 57
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S+ALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TDKDI TRVIA L ++T
Sbjct: 58 SRALTVPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETP 117
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
VSK+MTRNPIFV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+
Sbjct: 118 VSKVMTRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER 177
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
AAE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+P+LSTII EN+KV VSP+D
Sbjct: 178 AAEKGKAIAAAVEGVEKNWGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTDT 237
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V AAKKM E + + A++ ++ +GILTSKD+LMRV+AQNL PE T VE+ +
Sbjct: 238 VLTAAKKMLELKLSCAVVAVENRPKGILTSKDILMRVIAQNLHPESTPVEKVM 290
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V A ++M ++ ++ N GI+T KDI RVIA+ L P+ T
Sbjct: 227 SKVVTVSPTDTVLTAAKKMLELKLSCAVVAVENRP-KGILTSKDILMRVIAQNLHPESTP 285
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT NP T D+ ++AL M GKF HLPV++ +G V+A+ D+ + A++ +
Sbjct: 286 VEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHITHAAVATV- 344
Query: 178 KAAEQGSAIAAAVEGVERQWGS 199
G AA +++ W S
Sbjct: 345 -GGNAGVNNEAASSLMQKFWDS 365
>gi|226495213|ref|NP_001151563.1| CBS domain containing protein [Zea mays]
gi|195647750|gb|ACG43343.1| CBS domain containing protein [Zea mays]
Length = 550
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/272 (67%), Positives = 217/272 (79%), Gaps = 4/272 (1%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAG----GERTVKKLRLSKALTIPEGTIVSDACRRMAS 79
+ENG PP + S S G GERTVK+LRLSKALTIP+ T V +ACRRMAS
Sbjct: 27 AENGHGHDAPPPSRRSSVSLSRGHSTSLTGERTVKRLRLSKALTIPDHTTVHEACRRMAS 86
Query: 80 RRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEA 139
RRVDAVLLTD+NALL GI+TDKDITTRVIA L+ ++T VSK+MTRNP+FV +D+LA+EA
Sbjct: 87 RRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLAVEA 146
Query: 140 LQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
LQKMVQGKFRHLPVVENGEVIAILDI KCLYDAI+RME+AAE+G AIAAAVEGVE+ WG+
Sbjct: 147 LQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGA 206
Query: 200 NFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
P FIETLRERMF+PSLSTII+EN KV V+PSD V A+KKM E + +SA++
Sbjct: 207 AVPGPNNFIETLRERMFRPSLSTIISENPKVVTVAPSDMVLTASKKMLELKVSSAVVAIE 266
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+K GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 267 NKPGGILTSRDILMRVIAQNLPPESTTVEKVM 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K +T+ +V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T V
Sbjct: 236 KVVTVAPSDMVLTASKKMLELKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTTV 294
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK 178
K+MT++P T D+ ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 295 EKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIATVGN 354
Query: 179 AAEQGSAIAAAVEGVERQWGSNFS 202
+ GS +A+ ++R W S S
Sbjct: 355 SGAAGSEATSAM--MQRFWDSAMS 376
>gi|224031159|gb|ACN34655.1| unknown [Zea mays]
gi|414878944|tpg|DAA56075.1| TPA: CBS domain containing protein [Zea mays]
Length = 550
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 183/272 (67%), Positives = 217/272 (79%), Gaps = 4/272 (1%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAG----GERTVKKLRLSKALTIPEGTIVSDACRRMAS 79
+ENG PP + S S G GERTVK+LRLSKALTIP+ T V +ACRRMAS
Sbjct: 27 AENGHGHDAPPPSRRSSVSLSRGHSTSLTGERTVKRLRLSKALTIPDHTTVHEACRRMAS 86
Query: 80 RRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEA 139
RRVDAVLLTD+NALL GI+TDKDITTRVIA L+ ++T VSK+MTRNP+FV +D+LA+EA
Sbjct: 87 RRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLAVEA 146
Query: 140 LQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
LQKMVQGKFRHLPVVENGEVIAILDI KCLYDAI+RME+AAE+G AIAAAVEGVE+ WG+
Sbjct: 147 LQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGA 206
Query: 200 NFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
P FIETLRERMF+PSLSTII+EN KV V+PSD V A+KKM E + +SA++
Sbjct: 207 AVPGPNNFIETLRERMFRPSLSTIISENPKVVTVAPSDMVLTASKKMLELKVSSAVVAIE 266
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+K GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 267 NKPGGILTSRDILMRVIAQNLPPESTTVEKVM 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K +T+ +V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T V
Sbjct: 236 KVVTVAPSDMVLTASKKMLELKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTTV 294
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK 178
K+MT++P T D+ ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 295 EKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIATVGN 354
Query: 179 AAEQGSAIAAAVEGVERQWGSNFS 202
+ GS +A+ ++R W S S
Sbjct: 355 SGAAGSEATSAM--MQRFWDSAMS 376
>gi|242055437|ref|XP_002456864.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
gi|241928839|gb|EES01984.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
Length = 547
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 183/272 (67%), Positives = 221/272 (81%), Gaps = 4/272 (1%)
Query: 24 SENG-GNLSKPPSPQGESSSSVGGAG---GERTVKKLRLSKALTIPEGTIVSDACRRMAS 79
+ENG G+ + PPS + S S G + ERTVK+LRLSKALTIP+ T V +ACRRMAS
Sbjct: 25 AENGHGHDAPPPSRRASVSLSRGPSTTLTSERTVKRLRLSKALTIPDHTTVHEACRRMAS 84
Query: 80 RRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEA 139
RRVDAVLLTD+NALL GI+TDKDITTRVIA ++ ++T VSK+MTRNP+FV +D+LA+EA
Sbjct: 85 RRVDAVLLTDSNALLCGILTDKDITTRVIAREMKMEETPVSKVMTRNPVFVHADTLAVEA 144
Query: 140 LQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
LQKMVQGKFRHLPVVE+GEVIAILDI KCLYDAI+RME+AAE+G AIAAA EGVE+ WG+
Sbjct: 145 LQKMVQGKFRHLPVVEHGEVIAILDIAKCLYDAIARMERAAEKGKAIAAAAEGVEKHWGA 204
Query: 200 NFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
S P FIETLRERMFKPSLSTII+EN KV V+PSD V A+KKM E + +SA++
Sbjct: 205 AVSGPNNFIETLRERMFKPSLSTIISENPKVVTVAPSDTVLTASKKMLELKVSSAVVAIE 264
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+K GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 265 NKPGGILTSRDILMRVIAQNLPPESTTVEKVM 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K +T+ V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T V
Sbjct: 234 KVVTVAPSDTVLTASKKMLELKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTTV 292
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK 178
K+MT++P T D ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 293 EKVMTQSPECATVDMPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIATVGN 352
Query: 179 AAEQGSAIAAAVEGVERQWGSNFS 202
+ GS +A+ ++R W S S
Sbjct: 353 SGAAGSEATSAM--MQRFWDSAMS 374
>gi|125528914|gb|EAY77028.1| hypothetical protein OsI_04983 [Oryza sativa Indica Group]
gi|125573153|gb|EAZ14668.1| hypothetical protein OsJ_04591 [Oryza sativa Japonica Group]
Length = 497
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/243 (71%), Positives = 210/243 (86%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLSKALTIP+ T V +ACRRMA+RRVDAVLLTD+NALL GI+TDKDITTRVI
Sbjct: 3 GERTVKRLRLSKALTIPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVI 62
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
A L+ ++T VSK+MTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KC
Sbjct: 63 ARELKLEETPVSKVMTRNPLFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 122
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI+RME+AAE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+PSLSTII+EN+
Sbjct: 123 LYDAIARMERAAEKGKAIAAAVEGVEKHWGASVSGPNTFIETLRERMFRPSLSTIISENS 182
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
KV V+P+D V A+KKM E + +SA++ +K GILTS+D+LMRV+AQNL PE T VE
Sbjct: 183 KVVTVAPTDTVLTASKKMLEVKVSSAVVAIENKPGGILTSRDILMRVIAQNLPPESTTVE 242
Query: 289 RFI 291
+ +
Sbjct: 243 KVM 245
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T
Sbjct: 182 SKVVTVAPTDTVLTASKKMLEVKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTT 240
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT+ P T D+ ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 241 VEKVMTQTPECATVDTPILDALHTMHDGKFLHLPVLDKDGNVVTVVDVLHITHAAIATVG 300
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFS 202
+A GS +A+ ++R W S S
Sbjct: 301 NSAGSGSEATSAM--MQRFWDSAMS 323
>gi|225456355|ref|XP_002283958.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like isoform 1
[Vitis vinifera]
Length = 546
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/298 (62%), Positives = 231/298 (77%), Gaps = 10/298 (3%)
Query: 1 MSSQGGS-RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSS------VGGAGGERTV 53
M+S GGS R+S + + + +SENG P S + +S+ G GERTV
Sbjct: 1 MASHGGSSRKSLTLSMPSQGKKKASENGAG---PDSARKSLASARSIISLKGEETGERTV 57
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
K+LRLS+ALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TDKDI TRVIA L
Sbjct: 58 KRLRLSRALTVPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELN 117
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAI 173
++T VSK+MTRNPIFV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI
Sbjct: 118 LEETPVSKVMTRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAI 177
Query: 174 SRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIV 233
+RME+AAE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+P+LSTII EN+KV V
Sbjct: 178 ARMERAAEKGKAIAAAVEGVEKNWGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTV 237
Query: 234 SPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
SP+D V AAKKM E + + A++ ++ +GILTSKD+LMRV+AQNL PE T VE+ +
Sbjct: 238 SPTDTVLTAAKKMLELKLSCAVVAVENRPKGILTSKDILMRVIAQNLHPESTPVEKVM 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V A ++M ++ ++ N GI+T KDI RVIA+ L P+ T
Sbjct: 232 SKVVTVSPTDTVLTAAKKMLELKLSCAVVAVENRP-KGILTSKDILMRVIAQNLHPESTP 290
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT NP T D+ ++AL M GKF HLPV++ +G V+A+ D+ + A++ +
Sbjct: 291 VEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHITHAAVATV- 349
Query: 178 KAAEQGSAIAAAVEGVERQWGS 199
G AA +++ W S
Sbjct: 350 -GGNAGVNNEAASSLMQKFWDS 370
>gi|147863576|emb|CAN79772.1| hypothetical protein VITISV_019408 [Vitis vinifera]
Length = 569
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/290 (64%), Positives = 227/290 (78%), Gaps = 7/290 (2%)
Query: 1 MSSQGGSRRSQK--RAPSTSKRTSSSENGGNLSKPPSPQGESSSSVG-GAGGERTVKKLR 57
M+S GGS R PS K+ +SENG P S + +S+ G GERTVK+LR
Sbjct: 1 MASHGGSSRKSLTLSMPSQGKK-KASENGAG---PDSARKSLASARSMGLTGERTVKRLR 56
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
LS+ALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TDKDI TRVIA L ++T
Sbjct: 57 LSRALTVPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEET 116
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
VSK+MTRNPIFV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME
Sbjct: 117 PVSKVMTRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARME 176
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSD 237
+AAE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+P+LSTII EN+KV VSP+D
Sbjct: 177 RAAEKGKAIAAAVEGVEKNWGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTD 236
Query: 238 PVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V AAKKM E + + A++ ++ +GILTSKD+LMRV+AQNL PE T V
Sbjct: 237 TVLTAAKKMLELKLSCAVVAVENRPKGILTSKDILMRVIAQNLHPESTPV 286
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V A ++M ++ ++ N GI+T KDI RVIA+ L P+ T
Sbjct: 227 SKVVTVSPTDTVLTAAKKMLELKLSCAVVAVENRP-KGILTSKDILMRVIAQNLHPESTP 285
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITK---------- 167
V +MT NP T D+ ++AL M GKF HLPV++ +G V+A+ D+
Sbjct: 286 V--VMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHITHAAVATVK 343
Query: 168 -CLYDAISRMEKAAEQGSAIAAAVEGVERQWGSN 200
CL S ++AA++ S ++ + Q G N
Sbjct: 344 LCLSKCCSSQQQAAKELSCFQCFIDRM--QVGGN 375
>gi|357126564|ref|XP_003564957.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like
[Brachypodium distachyon]
Length = 550
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 224/288 (77%), Gaps = 6/288 (2%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVG----GAGGERTVKKLRLSKALT 63
RR+ A +R ENG + P S + +S+S ERTVK+LRLSKALT
Sbjct: 14 RRNISSASGPRRRALPMENGHD--APSSARRPASASFSRTTSSMAAERTVKRLRLSKALT 71
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
IP+ T V +ACRRMA+RRVDAVLLTD+NALL GI+TDKDITTRVIA L+ + T VSK+M
Sbjct: 72 IPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEDTPVSKVM 131
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQG 183
TRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE+G
Sbjct: 132 TRNPLFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKG 191
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAA 243
AIAAAVEGVE+ WG+ S P F+ETLRERMF+PSLSTII+EN+KV V+P+D V A+
Sbjct: 192 KAIAAAVEGVEKHWGTAVSGPNTFVETLRERMFRPSLSTIISENSKVVTVAPTDTVLTAS 251
Query: 244 KKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
KKM E + +SA++ +K GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 252 KKMLELKVSSAVVAIENKPGGILTSRDILMRVIAQNLPPESTTVEKVM 299
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V A ++M +V + ++ N GI+T +DI RVIA+ L P+ T
Sbjct: 236 SKVVTVAPTDTVLTASKKMLELKVSSAVVAIENKP-GGILTSRDILMRVIAQNLPPESTT 294
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT++P T+D+ +EAL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 295 VEKVMTQSPECATTDTPILEALHTMHDGKFLHLPVLDSDGNVVTVIDVLHITHAAIATVG 354
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSA 203
+ GS +++ ++R W S S+
Sbjct: 355 NSGAAGSEATSSM--MQRFWDSAMSS 378
>gi|118484915|gb|ABK94323.1| unknown [Populus trichocarpa]
Length = 541
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 226/291 (77%), Gaps = 2/291 (0%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
M+SQG S R + S R ++E GG S + ++S G GERTVK+LRLSK
Sbjct: 2 MASQGSSTRKSMSSSSFHGRKKANEGGG--GPDASRKSITASRSMGLTGERTVKRLRLSK 59
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
ALT+PE T + +ACRRMA+RRVDA+LLTD+NALL GI+TDKD+ +RVIA + ++T VS
Sbjct: 60 ALTVPESTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVS 119
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
K+MTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AA
Sbjct: 120 KVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 179
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA 240
E+G AIAAAVEGVE+ WG++ S P FIETLRERMF+P+LSTII EN+KV VSPS+ V
Sbjct: 180 EKGKAIAAAVEGVEKNWGTSISVPNTFIETLRERMFRPALSTIIPENSKVVTVSPSETVL 239
Query: 241 VAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V KKM E RS A++ K +GI TSKD+LMRV+AQNL P+ TLVE+ +
Sbjct: 240 VVTKKMLESRSGCAVVTVDEKPRGIFTSKDILMRVIAQNLPPDSTLVEKVM 290
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P T++ + + SR AV+ D GI T KDI RVIA+ L PD T
Sbjct: 227 SKVVTVSPSETVLVVTKKMLESRSGCAVVTVDEKP--RGIFTSKDILMRVIAQNLPPDST 284
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRM 176
+V K+MT NP T D+ ++AL M GKF HLPVV+ +G ++A++D+ + A++ +
Sbjct: 285 LVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGNIVAVIDVIHITHAAVATV 344
Query: 177 EKAAEQGSAIAAAVEGVERQWGS 199
+ A+ + +++ W S
Sbjct: 345 GNTTGANNETASTM--MQKFWDS 365
>gi|15242788|ref|NP_201154.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|75262731|sp|Q9FMV3.1|Y5349_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB1
gi|9758290|dbj|BAB08814.1| unnamed protein product [Arabidopsis thaliana]
gi|110737583|dbj|BAF00733.1| hypothetical protein [Arabidopsis thaliana]
gi|332010375|gb|AED97758.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 543
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/297 (61%), Positives = 228/297 (76%), Gaps = 16/297 (5%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQG---------ESSSSVGGAGGER 51
M+SQGG RRS T++S +G S + +G S S +G GGER
Sbjct: 1 MASQGGPRRSLSV-------TTASLHGKKKSMDMAERGLDTGRRSLTVSRSPLGLTGGER 53
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TVK+LRLSKALT+P T + +AC+RMASRRVDA+LLTD+N +L GI+TDKDI TRVI++
Sbjct: 54 TVKRLRLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQE 113
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
L ++T VSK+MT+NP+FV S++LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYD
Sbjct: 114 LNVEETPVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 173
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVA 231
AI+RME+AAE+G AIAAAVEGVE+ WG+N S P FIETLR+RMF+PSLSTII ++ KV
Sbjct: 174 AIARMERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVL 233
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
VSP+D V AKKM EF+S+ A+++ K++GI TSKD+LMRVVA+NL P TLVE
Sbjct: 234 KVSPTDTVLTVAKKMVEFQSSCAVVIIEDKLRGIFTSKDILMRVVAENLPPSETLVE 290
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI T KDI RV+AE L P +T+V +MT+NP D+ +EAL M +GKF HLPV
Sbjct: 264 LRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 323
Query: 154 VE 155
+
Sbjct: 324 TD 325
>gi|224122050|ref|XP_002318739.1| predicted protein [Populus trichocarpa]
gi|222859412|gb|EEE96959.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/272 (64%), Positives = 217/272 (79%), Gaps = 2/272 (0%)
Query: 20 RTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMAS 79
R ++E GG S + ++S G GERTVK+LRLSKALT+PE T + +ACRRMA+
Sbjct: 9 RKKANEGGG--GPDASRKAITASRSMGLTGERTVKRLRLSKALTVPESTSIYEACRRMAA 66
Query: 80 RRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEA 139
RRVDA+LLTD+NALL GI+TDKD+ +RVIA + ++T VSK+MTRNP+FV SD+LA+EA
Sbjct: 67 RRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVSKVMTRNPVFVLSDTLAVEA 126
Query: 140 LQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
LQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AAE+G AIAAAVEGVE+ WG+
Sbjct: 127 LQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKNWGT 186
Query: 200 NFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
+ S P FIETLRERMF+P+LSTII EN+KV VSPS+ V V KKM E RS A++
Sbjct: 187 SISVPNTFIETLRERMFRPALSTIIPENSKVVTVSPSETVLVVTKKMLESRSGCAVVTVD 246
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
K +GI TSKD+LMRV+AQNL P+ TLVE+ +
Sbjct: 247 EKPRGIFTSKDILMRVIAQNLPPDSTLVEKVM 278
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P T++ + + SR AV+ D GI T KDI RVIA+ L PD T
Sbjct: 215 SKVVTVSPSETVLVVTKKMLESRSGCAVVTVDEKP--RGIFTSKDILMRVIAQNLPPDST 272
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRM 176
+V K+MT NP T D+ ++AL M GKF HLPVV+ +G ++A++D+ + A++ +
Sbjct: 273 LVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGNIVAVIDVIHITHAAVATV 332
Query: 177 EKAAEQGSAIAAAVEGVERQWGS 199
A + A+ + +++ W S
Sbjct: 333 GNATGANNETASTM--MQKFWDS 353
>gi|297797347|ref|XP_002866558.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297312393|gb|EFH42817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/297 (61%), Positives = 229/297 (77%), Gaps = 15/297 (5%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGE---------SSSSVGGAGGER 51
M+SQGGS R R+ S T++S +G S +G S S +G GGER
Sbjct: 1 MASQGGSSR---RSLSV---TTASLHGKKKSMDIGERGPDTGRRSLTVSRSPLGLTGGER 54
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TVK+LRLSKALT+P T + +AC+RMASRRVDA+LLTD+N +L GI+TDKDI TRVI++
Sbjct: 55 TVKRLRLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQE 114
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
+ ++T VSK+MT+NP+FV S++LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYD
Sbjct: 115 VNVEETPVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 174
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVA 231
AI+RME+AAE+G AIAAAVEGVE+ WG+N S P FIETLR+RMF+PSLSTII + KV
Sbjct: 175 AIARMERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLSTIIPADTKVL 234
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
VSP+D V AKKM EF+S+ A+++ K++GI TSKD+LMRVVA+NL+P TLVE
Sbjct: 235 KVSPTDTVLTVAKKMVEFQSSCAVVIIEDKLRGIFTSKDILMRVVAENLAPSETLVE 291
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI T KDI RV+AE L P +T+V +MT+NP D+ +EAL M +GKF HLPV
Sbjct: 265 LRGIFTSKDILMRVVAENLAPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 324
Query: 154 VE 155
+
Sbjct: 325 TD 326
>gi|168028312|ref|XP_001766672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682104|gb|EDQ68525.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 222/292 (76%), Gaps = 9/292 (3%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
MSSQ R P ++ S NG L + PS SV GERTVK+LRLSK
Sbjct: 25 MSSQKSGRSGSTPGPFNGQKKSGLGNGVTLPRKPS------RSV--PPGERTVKRLRLSK 76
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
ALTIP+G+ V+DACRRMA+RRVDA LL D++ALL GI+TDKD+ TRVIAEGLRP+ T VS
Sbjct: 77 ALTIPDGSTVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEDTSVS 136
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
K+MT+NP+FV D+LA+EALQKMVQGKFRHLPVVENGEV+A+LDITKCLYDAI+RME+AA
Sbjct: 137 KVMTKNPVFVMGDTLAVEALQKMVQGKFRHLPVVENGEVVALLDITKCLYDAIARMERAA 196
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA 240
E+G+AIAAAVE VER+WG+N + +FIE LR++MF+P+L +II E KV S S+ V
Sbjct: 197 EKGNAIAAAVESVEREWGNNATEKSSFIENLRDKMFRPTLGSIIPEGTKVPTCSASETVT 256
Query: 241 VAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A KKM+E R NS +IV+ S K GILTSKDVLMRVVAQ L PE T +++ +
Sbjct: 257 AATKKMKENRMNSVIIVSPSNKPTGILTSKDVLMRVVAQGLPPETTTLDKVM 308
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 54 KKLRLSKALTIPEGT---------IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
K R + IPEGT V+ A ++M R+++V++ + +GI+T KD+
Sbjct: 230 KMFRPTLGSIIPEGTKVPTCSASETVTAATKKMKENRMNSVIIVSPSNKPTGILTSKDVL 289
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAIL 163
RV+A+GL P+ T + K+MT NP D+ ++AL M GKF HLPV + +G ++A +
Sbjct: 290 MRVVAQGLPPETTTLDKVMTPNPECAGLDTTLVDALHTMHDGKFLHLPVTDRDGHIVACV 349
Query: 164 DITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
D+ + + A++ + + G A +++ W S
Sbjct: 350 DVLQLTHGAVATVGGGSAAGGGADQATNMLQKFWDS 385
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A ++M R ++AL+V S + GI+T KDV RV+A+ L PE T V + + +
Sbjct: 86 VADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEDTSVSKVMTK 141
>gi|302774691|ref|XP_002970762.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
gi|300161473|gb|EFJ28088.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
Length = 433
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/235 (69%), Positives = 200/235 (85%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ERTVKKLRLSKALT+P+GT V+DAC+RMA+RRVDA LLT+++ALL GI+TDKD+ TRVIA
Sbjct: 1 ERTVKKLRLSKALTVPDGTSVADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIA 60
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
EGLRP+ T VSK+MTRNP FV SDSLA++ALQKMVQGKFRHLPVV+NGEVIA+LDITKCL
Sbjct: 61 EGLRPEDTPVSKVMTRNPTFVMSDSLAVDALQKMVQGKFRHLPVVDNGEVIALLDITKCL 120
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAK 229
YDAI RME++A +G+AIAAAVE VERQWG+ FS F+ETL+ERMF+P+L T++ EN K
Sbjct: 121 YDAIVRMERSALKGNAIAAAVEDVERQWGNTFSGQSNFVETLKERMFRPTLGTLVNENTK 180
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
VA V+P D V A KKMRE + NS ++ G+K GILTSKDVLMRVVA ++ ++
Sbjct: 181 VATVAPGDSVFTATKKMRELKVNSVVVTVGNKPVGILTSKDVLMRVVAVGVAADI 235
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ G V A ++M +V++V++T N + GI+T KD+ RV+A G+ D
Sbjct: 179 TKVATVAPGDSVFTATKKMRELKVNSVVVTVGNKPV-GILTSKDVLMRVVAVGVAAD-IP 236
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAIS 174
V KIMT NP + ++AL M GKF HLPV+ ++G V++ +D+ + A +
Sbjct: 237 VEKIMTTNPECANLEMTIVDALHTMHDGKFLHLPVINKDGHVVSCVDVLHITHSAFA 293
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQ-GILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A K+M R ++AL+ S + GI+T KDV RV+A+ L PE T V + + R
Sbjct: 21 VADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVMTR 76
>gi|302772022|ref|XP_002969429.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
gi|300162905|gb|EFJ29517.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
Length = 426
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/235 (69%), Positives = 200/235 (85%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ERTVKKLRLSKALT+P+GT V+DAC+RMA+RRVDA LLT+++ALL GI+TDKD+ TRVIA
Sbjct: 1 ERTVKKLRLSKALTVPDGTSVADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIA 60
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
EGLRP+ T VSK+MTRNP FV SDSLA++ALQKMVQGKFRHLPVV+NGEVIA+LDITKCL
Sbjct: 61 EGLRPEDTPVSKVMTRNPTFVMSDSLAVDALQKMVQGKFRHLPVVDNGEVIALLDITKCL 120
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAK 229
YDAI RME++A +G+AIAAAVE VERQWG+ FS F+ETL+ERMF+P+L T++ EN K
Sbjct: 121 YDAIVRMERSALKGNAIAAAVEDVERQWGNTFSGQSNFVETLKERMFRPTLGTLVNENTK 180
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
VA V+P D V A KKMRE + NS ++ G+K GILTSKDVLMRVVA ++ ++
Sbjct: 181 VATVAPGDSVFTATKKMRELKVNSVVVTVGNKPVGILTSKDVLMRVVAVGVAADI 235
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ G V A ++M +V++V++T N + GI+T KD+ RV+A G+ D
Sbjct: 179 TKVATVAPGDSVFTATKKMRELKVNSVVVTVGNKPV-GILTSKDVLMRVVAVGVAAD-IP 236
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAIS 174
V KIMT NP + ++AL M GKF HLPV+ ++G V++ +D+ + A +
Sbjct: 237 VEKIMTTNPECANLEMTIVDALHTMHDGKFLHLPVINKDGHVVSCVDVLHITHSAFA 293
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQ-GILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A K+M R ++AL+ S + GI+T KDV RV+A+ L PE T V + + R
Sbjct: 21 VADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVMTR 76
>gi|168028557|ref|XP_001766794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682003|gb|EDQ68425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 206/244 (84%), Gaps = 1/244 (0%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLSKALTIPEGT V+DACRRMA+RRVDA LLTD++ALL GI+TDKD+ TRVI
Sbjct: 1 GERTVKRLRLSKALTIPEGTTVADACRRMATRRVDAALLTDSSALLCGIITDKDVATRVI 60
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
A+GL+P++T+VSK+MTRNPIFV D+LA+EALQKMVQGKFRHLPVVE GEV+A+LDITKC
Sbjct: 61 ADGLKPEETLVSKVMTRNPIFVMGDTLAVEALQKMVQGKFRHLPVVEGGEVVALLDITKC 120
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI+RME+AAE+G+AIAAAVE VER+W S +FIE LR+RMF+P+L +IITE
Sbjct: 121 LYDAIARMERAAEKGNAIAAAVESVEREWSVKGSDKSSFIENLRDRMFRPTLGSIITEGT 180
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTLV 287
KV SPS+ V A KKM+E R NS +I + S K GILTSKDVLMRVVA++L PE T +
Sbjct: 181 KVPTCSPSETVTDATKKMKEQRMNSVVITSSSNKPIGILTSKDVLMRVVAKDLQPEKTTL 240
Query: 288 ERFI 291
++ +
Sbjct: 241 DKVM 244
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+DA ++M +R+++V++T ++ GI+T KD+ RV+A+ L+P++T + K+MT NP
Sbjct: 191 VTDATKKMKEQRMNSVVITSSSNKPIGILTSKDVLMRVVAKDLQPEKTTLDKVMTPNPEC 250
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+ D+ ++AL M GKF HLPV + +G ++A +D+ + +
Sbjct: 251 ASLDTTLVDALHTMHDGKFLHLPVKDRDGLLVACVDVLQLTH 292
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A ++M R ++AL+ S + GI+T KDV RV+A L PE TLV + + R
Sbjct: 22 VADACRRMATRRVDAALLTDSSALLCGIITDKDVATRVIADGLKPEETLVSKVMTR 77
>gi|168034755|ref|XP_001769877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678783|gb|EDQ65237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 208/244 (85%), Gaps = 1/244 (0%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLS+ALTI +G+ V+DACRRMA+RRVDA LL D++ALL GI+TDKD+ TRVI
Sbjct: 1 GERTVKRLRLSRALTISDGSSVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVI 60
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
AEGLRP++T+VSK+MT+NP+FV D+LA+EALQKMVQGKFRHLPVVE GEV+A+LDITKC
Sbjct: 61 AEGLRPEETLVSKVMTKNPVFVMGDTLAVEALQKMVQGKFRHLPVVEKGEVVALLDITKC 120
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI+RME+AAE+G+AIAAAVE VER+WG+N S +FIE LR++MF+P+L +II E +
Sbjct: 121 LYDAIARMERAAEKGNAIAAAVESVEREWGNNASDKSSFIENLRDKMFRPTLGSIIPEGS 180
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVT-GSKIQGILTSKDVLMRVVAQNLSPELTLV 287
KV SPS+ V+ A +KM+E+R NS +I + +K GILTSKDVLMRVVAQ L PE T +
Sbjct: 181 KVPTCSPSETVSAATRKMKEYRMNSVIITSLSNKPSGILTSKDVLMRVVAQGLPPETTTL 240
Query: 288 ERFI 291
++ +
Sbjct: 241 DKVM 244
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Query: 54 KKLRLSKALTIPEGT---------IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
K R + IPEG+ VS A R+M R+++V++T + SGI+T KD+
Sbjct: 166 KMFRPTLGSIIPEGSKVPTCSPSETVSAATRKMKEYRMNSVIITSLSNKPSGILTSKDVL 225
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAIL 163
RV+A+GL P+ T + K+MT NP D+ ++AL M GKF HLPV + +G ++A +
Sbjct: 226 MRVVAQGLPPETTTLDKVMTPNPECAGLDTTLVDALHTMHDGKFLHLPVTDRDGYIVACV 285
Query: 164 DI 165
D+
Sbjct: 286 DV 287
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFI 291
+S VA A ++M R ++AL+V S + GI+T KDV RV+A+ L PE TLV + +
Sbjct: 16 ISDGSSVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEETLVSKVM 75
Query: 292 MR 293
+
Sbjct: 76 TK 77
>gi|356511510|ref|XP_003524468.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 542
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 219/292 (75%), Gaps = 2/292 (0%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
MSS GGS ++ R G S P ++ +S GERTVK LRLSK
Sbjct: 1 MSSHGGSSLRNGSLSNSPTRAKKKAFGSEHSTPDFIARKTFTS-PRTMGERTVKSLRLSK 59
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
ALT+PE T V +ACRRMA+R+VDA+LLTD+NALL GI+TDKDI TRVIA + ++T VS
Sbjct: 60 ALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPVS 119
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
K+MTRNP+FV SD+ A+EALQKMVQG+FRHLPVVENGEV+AILDI KCLYDAI+RME+AA
Sbjct: 120 KVMTRNPVFVLSDTRAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAA 179
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYA-FIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
E+G AIAAAVEG+E+ WG++ A + F+ETLRE++FKPSLSTII EN+KV VSP+D V
Sbjct: 180 EKGKAIAAAVEGIEKHWGTSTPASNSTFMETLREQIFKPSLSTIIPENSKVVTVSPTDSV 239
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
KKM E R++SA++ K GILTSKD+LMRV+AQ+L P TLVE+ +
Sbjct: 240 LTTTKKMLELRASSAVVTIDDKPCGILTSKDILMRVIAQSLPPSSTLVEKVM 291
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P ++++ + + R AV+ D GI+T KDI RVIA+ L P T
Sbjct: 228 SKVVTVSPTDSVLTTTKKMLELRASSAVVTIDDKPC--GILTSKDILMRVIAQSLPPSST 285
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAIS 174
+V K+MT NP T D+ ++AL M GKF HLPVV G V+A +D+ + A++
Sbjct: 286 LVEKVMTPNPECGTIDTPIVDALHTMHDGKFLHLPVVNRGGIVVATVDVIHITHAAVA 343
>gi|356527608|ref|XP_003532400.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 598
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/245 (67%), Positives = 203/245 (82%), Gaps = 5/245 (2%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ERTVK LRLSKALT+PE T V +ACRRMA+R+VDA+LLTD+NALL GI+TDKDI TRVIA
Sbjct: 105 ERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIA 164
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ ++T VSK+MTRNP+FV SD+LA+EALQKMVQG+FRHLPVVENGEV+AILDI KCL
Sbjct: 165 REVNLEETHVSKVMTRNPVFVLSDALAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCL 224
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITE 226
YDAI+RME+ AE+G AIAAAVEG+E+ WG+ S P F+ETLRE++FKPSLSTII +
Sbjct: 225 YDAIARMERKAEKGKAIAAAVEGIEKHWGT--STPGSNSTFMETLREQIFKPSLSTIIPQ 282
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
N+KV VSP+D V KKM E R++SA++ G K+ GILTSKD+LMRV+AQ+L P TL
Sbjct: 283 NSKVVTVSPTDSVLTTTKKMLELRASSAVVTVGDKLCGILTSKDILMRVIAQSLPPSSTL 342
Query: 287 VERFI 291
VE+ +
Sbjct: 343 VEKVM 347
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V ++M R + ++T + L GI+T KDI RVIA+ L P T+
Sbjct: 284 SKVVTVSPTDSVLTTTKKMLELRASSAVVTVGDKL-CGILTSKDILMRVIAQSLPPSSTL 342
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT NP T D+ I+AL M G F HL VV +G V+A +D + A++ +
Sbjct: 343 VEKVMTPNPECGTIDTPIIDALHTMHDGNFLHLLVVNRDGIVVATVDAIHITHAAVATVG 402
Query: 178 KAAEQGSAIAAAVEGVERQWGS 199
S A ++ +++ W S
Sbjct: 403 NTPNFNSEAANSM--IQKIWDS 422
>gi|356508821|ref|XP_003523152.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like [Glycine
max]
Length = 523
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 207/252 (82%), Gaps = 1/252 (0%)
Query: 40 SSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVT 99
SSS GERTVK LRL+KALT+PE T V +ACRRMA+RRVDA+LLTD+NALL GI+T
Sbjct: 30 SSSRPLALAGERTVKSLRLTKALTVPETTTVYEACRRMAARRVDALLLTDSNALLCGILT 89
Query: 100 DKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV 159
DKDI RVIA+ + ++T VSK+MTRNP+FV S++LA EALQKMVQGKFRHLPVVENGEV
Sbjct: 90 DKDIAARVIAKEINLEETPVSKVMTRNPVFVLSETLAAEALQKMVQGKFRHLPVVENGEV 149
Query: 160 IAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPS 219
+A+LDI KCL+DAI+RME+AAE+G AIAAAVEGVE+ WG++ S +FIETLRE++FKPS
Sbjct: 150 LALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKHWGTSDSN-TSFIETLREQIFKPS 208
Query: 220 LSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQN 279
LSTII EN+K+ VSP+D V KKM EFR++ A++ K +GI TSKD+L+RV+AQN
Sbjct: 209 LSTIIPENSKLVTVSPTDSVLTTTKKMVEFRASCAVVTVNDKPRGIFTSKDILLRVIAQN 268
Query: 280 LSPELTLVERFI 291
LSPE T VE+ +
Sbjct: 269 LSPESTPVEKVM 280
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK +T+ V ++M R ++T N GI T KDI RVIA+ L P+ T
Sbjct: 217 SKLVTVSPTDSVLTTTKKMVEFRASCAVVT-VNDKPRGIFTSKDILLRVIAQNLSPESTP 275
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
V K+MT NP V D+ ++AL M GKF HLPVV+
Sbjct: 276 VEKVMTPNPECVIIDTPIVDALHTMHDGKFLHLPVVD 312
>gi|242070207|ref|XP_002450380.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
gi|241936223|gb|EES09368.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
Length = 511
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 194/261 (74%), Gaps = 46/261 (17%)
Query: 31 SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
++PP+P A GERTVKKLRLSKALTIPEGT VS+ACRRMA+RRVDAVLLTDA
Sbjct: 48 TRPPTPDH--------APGERTVKKLRLSKALTIPEGTTVSEACRRMAARRVDAVLLTDA 99
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
LLSGIVTDKDI TRVIAEGLR +QT++SKIMTRNP++VT D+ AIEALQKMVQGKFRH
Sbjct: 100 GGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPLYVTGDTPAIEALQKMVQGKFRH 159
Query: 151 LPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET 210
LPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+AAAVEGVERQ G N S P IET
Sbjct: 160 LPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQLGGNVSGPQNVIET 219
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
LRERMFKPSLSTIITEN SKD
Sbjct: 220 LRERMFKPSLSTIITENTN--------------------------------------SKD 241
Query: 271 VLMRVVAQNLSPELTLVERFI 291
VLMRVVAQNLSP+LTLVE+ +
Sbjct: 242 VLMRVVAQNLSPQLTLVEKVM 262
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 94 LSGIVTD----KDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFR 149
LS I+T+ KD+ RV+A+ L P T+V K+MT +P T D+ ++AL M GKF
Sbjct: 229 LSTIITENTNSKDVLMRVVAQNLSPQLTLVEKVMTAHPDCATLDTTILDALHIMHDGKFL 288
Query: 150 HLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFS 202
H+PV++ +G+V A LD+ + + AIS +E + +A + +++ W S +
Sbjct: 289 HIPVLDGDGQVAACLDVLQITHAAISMVEGGPGAANDVANTI--MQKFWDSALA 340
>gi|297795865|ref|XP_002865817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311652|gb|EFH42076.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 548
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 204/249 (81%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G GERTVK+LRL KALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TD+DI
Sbjct: 55 GERSGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIA 114
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
T+VIA+ L ++T VSK+MT+NP+FV SD++A+EALQKMVQGKFRHLPVVENGEVIA+LD
Sbjct: 115 TKVIAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLD 174
Query: 165 ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
I KCLYDAI+RME++ E+G AIAAAVEGVE+ WG++ + P F+ETLRER+FKPSLSTII
Sbjct: 175 IAKCLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTII 234
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN KV V + V KM E++S++A+++ +K+ GILTSKD+LMRV++QNL E
Sbjct: 235 PENTKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQET 294
Query: 285 TLVERFIMR 293
T VE+ + +
Sbjct: 295 TTVEKVMTK 303
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT+NP T D ++AL M GKF HLPV
Sbjct: 272 LVGILTSKDILMRVISQNLPQETTTVEKVMTKNPESATVDMAIVDALHIMHNGKFLHLPV 331
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 332 LDKDGDVVAVIDVIHITHAAVT 353
>gi|18423173|ref|NP_568736.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|22327688|ref|NP_680412.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|347662481|sp|P0DH79.1|Y5064_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB5
gi|347662483|sp|Q0WLC7.2|Y5053_ARATH RecName: Full=CBS domain-containing protein CBSCBSPB4
gi|8777387|dbj|BAA96977.1| unnamed protein product [Arabidopsis thaliana]
gi|9758762|dbj|BAB09138.1| unnamed protein product [Arabidopsis thaliana]
gi|332008572|gb|AED95955.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
gi|332008588|gb|AED95971.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
[Arabidopsis thaliana]
Length = 548
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/247 (63%), Positives = 203/247 (82%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G GERTVK+LRL KALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TD+DI
Sbjct: 55 GERSGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIA 114
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
T+VIA+ L ++T VSK+MT+NP+FV SD++A+EALQKMVQGKFRHLPVVENGEVIA+LD
Sbjct: 115 TKVIAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLD 174
Query: 165 ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
I KCLYDAI+RME++ E+G AIAAAVEGVE+ WG++ + P F+ETLRER+FKPSLSTII
Sbjct: 175 IAKCLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTII 234
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN KV V + V KM E++S++A+++ +K+ GILTSKD+LMRV++QNL E
Sbjct: 235 PENTKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQET 294
Query: 285 TLVERFI 291
T VE+ +
Sbjct: 295 TTVEKVM 301
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT NP T D +EAL M GKF HLPV
Sbjct: 272 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 331
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 332 LDKDGDVVAVIDVIHITHAAVT 353
>gi|168002427|ref|XP_001753915.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694891|gb|EDQ81237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 201/244 (82%), Gaps = 1/244 (0%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLSKALTIP+GT V+DACRRMA+RRV A LLTD+NALL GI+TD+DI+TRVI
Sbjct: 25 GERTVKRLRLSKALTIPDGTTVADACRRMATRRVTAALLTDSNALLCGIITDQDISTRVI 84
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
AEGL+P++ VSK+MTRNP+FV D+LA+EALQ MVQGKFRHLPVVE+GEVIA+LDITKC
Sbjct: 85 AEGLKPEEISVSKVMTRNPVFVMGDTLAVEALQTMVQGKFRHLPVVEDGEVIALLDITKC 144
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI+R+E AAE+G+AIAAA+E VER+W S F+E LR+RMFKP+L ++I E
Sbjct: 145 LYDAIARVEGAAEKGNAIAAAIESVEREWSVKGSDKSNFVENLRDRMFKPTLRSLIAEGT 204
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTLV 287
KVA S S+ V A KKMR+ R +S ++ + S K +GILTSKDVLM+V+AQ L PE T +
Sbjct: 205 KVATCSSSETVTTATKKMRDLRMSSVIVTSSSRKPRGILTSKDVLMKVIAQGLPPESTTL 264
Query: 288 ERFI 291
++ +
Sbjct: 265 DKVM 268
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T V+ A ++M R+ +V++T ++ GI+T KD+ +VIA+GL P+ T
Sbjct: 204 TKVATCSSSETVTTATKKMRDLRMSSVIVTSSSRKPRGILTSKDVLMKVIAQGLPPESTT 263
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
+ K+MT NP D+ ++AL M KF HLPV + +G V+A +D+ + A++ +
Sbjct: 264 LDKVMTPNPECAGLDTTLVDALHAMHDRKFLHLPVTDSDGSVVACVDVLHLTHGAVATV- 322
Query: 178 KAAEQGSAIAAAVEGVERQWGS 199
+A G A A A ++ W S
Sbjct: 323 -SACGGVAQAMATTMLQTFWDS 343
>gi|168028206|ref|XP_001766619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682051|gb|EDQ68472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 459
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 201/244 (82%), Gaps = 1/244 (0%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLSKALTIP+GT V+DACRRMA+RRVDA LLTD+NALL GI+TDKD+ R+I
Sbjct: 1 GERTVKRLRLSKALTIPDGTTVADACRRMATRRVDAALLTDSNALLCGIITDKDVAIRII 60
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
AEGL+P++T VSK+MTRNP FV D+LA+EALQKMVQG+FRHLPVVE+GEV+A+LDITKC
Sbjct: 61 AEGLKPEETSVSKVMTRNPTFVMGDTLAVEALQKMVQGRFRHLPVVEHGEVVALLDITKC 120
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYD I+R+E+AAE+G+A+AAAVE VER+W S FI+ LR+RM +P+L ++I E A
Sbjct: 121 LYDVIARIERAAEKGNALAAAVESVEREWSVKGSDESNFIQNLRDRMLRPTLRSLIAEVA 180
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSPELTLV 287
V SPS+ V VA+KKM+E + NS +I + SK GILTSKDVLMRVVAQ L PE T +
Sbjct: 181 SVPTCSPSETVTVASKKMKEQQMNSVIITSSCSKPIGILTSKDVLMRVVAQGLHPETTTL 240
Query: 288 ERFI 291
++ +
Sbjct: 241 DKVM 244
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A ++M +++++V++T + + GI+T KD+ RV+A+GL P+ T + K+MT NP
Sbjct: 191 VTVASKKMKEQQMNSVIITSSCSKPIGILTSKDVLMRVVAQGLHPETTTLDKVMTPNPEC 250
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
D+ ++AL M GKF HLPV + +G V+ LD+ + + A++ A G +A
Sbjct: 251 AGFDTTLVDALHIMHDGKFLHLPVTDHDGFVVTCLDVLQLTHGAVATARGAGSGGQDMAT 310
Query: 189 AVEGVERQWGS 199
+ ++R W S
Sbjct: 311 TM--LQRFWDS 319
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 239 VAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
VA A ++M R ++AL+ + + + GI+T KDV +R++A+ L PE T V + + R
Sbjct: 22 VADACRRMATRRVDAALLTDSNALLCGIITDKDVAIRIIAEGLKPEETSVSKVMTR 77
>gi|357465031|ref|XP_003602797.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
gi|355491845|gb|AES73048.1| Meiotically up-regulated gene 70 protein [Medicago truncatula]
Length = 528
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/247 (63%), Positives = 200/247 (80%), Gaps = 1/247 (0%)
Query: 46 GAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITT 105
G GERTVK LRLSKALT+PE T V +ACRRMA+RRVDA+LLTD+N LL GI+TDKDI T
Sbjct: 34 GLTGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTDSNGLLCGILTDKDIAT 93
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+V+AE + P+ T VSK+MTRNP+FV S++LA+EALQKMVQGKFRHLPVVENGEV+A+LDI
Sbjct: 94 KVVAEEINPEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVLALLDI 153
Query: 166 TKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG-SNFSAPYAFIETLRERMFKPSLSTII 224
KCL+DA +RME+AAE+G AIAAAVEGVE+ WG SN + +F+E LRE++FKPSLSTII
Sbjct: 154 AKCLHDATARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFVEALREKIFKPSLSTII 213
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN+K+ V+P+D + KKM E + A++ K +GI+TS+D+LMRV+AQNL P
Sbjct: 214 HENSKMVTVAPTDSILKTTKKMVELHAGCAVVTVDGKPRGIVTSRDILMRVIAQNLPPAS 273
Query: 285 TLVERFI 291
T VE+ +
Sbjct: 274 THVEKVM 280
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GIVT +DI RVIA+ L P T V K+MT NP V D+ ++AL M GKF HLPVV+
Sbjct: 253 GIVTSRDILMRVIAQNLPPASTHVEKVMTPNPECVIIDTPIVDALHTMHDGKFLHLPVVD 312
>gi|388514175|gb|AFK45149.1| unknown [Medicago truncatula]
Length = 528
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/247 (63%), Positives = 200/247 (80%), Gaps = 1/247 (0%)
Query: 46 GAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITT 105
G GERTVK LRLSKALT+PE T V +ACRRMA+RRVDA+LLTD+N LL GI+TDKDI T
Sbjct: 34 GLTGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTDSNGLLCGILTDKDIAT 93
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+V+AE + P+ T VSK+MTRNP+FV S++LA+EALQKMVQGKFRHLPVVENGEV+A+LDI
Sbjct: 94 KVVAEEINPEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVLALLDI 153
Query: 166 TKCLYDAISRMEKAAEQGSAIAAAVEGVERQWG-SNFSAPYAFIETLRERMFKPSLSTII 224
KCL+DA +RME+AAE+G AIAAAVEGVE+ WG SN + +F+E LRE++FKPSLSTII
Sbjct: 154 AKCLHDATARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFVEALREKIFKPSLSTII 213
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN+K+ V+P+D + KKM E + A++ K +GI+TS+D+LMRV+AQNL P
Sbjct: 214 HENSKMVTVAPTDSILKTTKKMVELHAGCAVVTVDGKPRGIVTSRDILMRVIAQNLPPAS 273
Query: 285 TLVERFI 291
T VE+ +
Sbjct: 274 THVEKVM 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GIVT +DI RVIA+ L P T V K+MT NP V D+ ++AL M GKF HLPV++
Sbjct: 253 GIVTSRDILMRVIAQNLPPASTHVEKVMTPNPECVIIDTPIVDALHTMHDGKFLHLPVID 312
>gi|224136197|ref|XP_002322269.1| predicted protein [Populus trichocarpa]
gi|222869265|gb|EEF06396.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 211/291 (72%), Gaps = 13/291 (4%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
M+SQG S R S R ++ENGG SS S+G GERTVK+LRLSK
Sbjct: 1 MASQGSSSRKSMSYSSFQGRKKANENGGGGLDGSRRSLTSSRSMG-LTGERTVKRLRLSK 59
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
ALT+PE T + AC RMA+ RVDA+LLTD+N+LL GI+TDKD+ +RVIA L ++T VS
Sbjct: 60 ALTVPESTSIYQACCRMAAHRVDALLLTDSNSLLCGILTDKDLVSRVIACELNLEETPVS 119
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
K+MTRNP+FV S++LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYDAI+RME+AA
Sbjct: 120 KVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAA 179
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA 240
E+G AIAAAVEGVE+ WG++ S FIETLRER+F+P++STII EN+K+ VSP++ V
Sbjct: 180 EKGKAIAAAVEGVEKNWGTSISGTNTFIETLRERIFRPAISTIIPENSKIVTVSPTETVL 239
Query: 241 VAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
K M E S+ A++ D+LMRV+ QNLSP TLVE+ +
Sbjct: 240 EVTKTMLESSSSCAVVT------------DILMRVITQNLSPNSTLVEKVM 278
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVI 160
DI RVI + L P+ T+V K+MT NP T D+ ++AL M GKF HLPV++ +G ++
Sbjct: 257 DILMRVITQNLSPNSTLVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVLDRDGNIV 316
Query: 161 AILDITKCLYDAIS 174
A++D+ + A++
Sbjct: 317 AVIDVIHITHAAVA 330
>gi|357156732|ref|XP_003577557.1| PREDICTED: CBS domain-containing protein CBSCBSPB5-like
[Brachypodium distachyon]
Length = 533
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 196/245 (80%), Gaps = 10/245 (4%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G ERTVK+LRLSKALT+PE T V +ACRRMA+RRVDA LLTD+NALL GI+TDKDI TRV
Sbjct: 41 GKERTVKRLRLSKALTVPESTTVLEACRRMAARRVDAALLTDSNALLCGILTDKDIATRV 100
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IA L+ D+T V K+MTR+P+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI K
Sbjct: 101 IARELKIDETPVWKVMTRHPVFVISDTLAVEALQKMVQGKFRHLPVVENGEVIAMLDIAK 160
Query: 168 CLYDAISRMEKAAEQG-SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
CLYDAI+RME+A+E+G +AIA AV+GV++ Y + E +E++F+PSLSTIIT
Sbjct: 161 CLYDAIARMERASEKGKAAIANAVDGVDK---------YHWAEAFKEQIFRPSLSTIITA 211
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
++ + I SP D V A KKM E S SA++ G+K+QGILTS+D+LMR++A+NL + T
Sbjct: 212 DSTIVIASPGDSVLAATKKMLEAHSCSAVVAVGNKVQGILTSRDILMRMIAKNLPADSTP 271
Query: 287 VERFI 291
V++ +
Sbjct: 272 VDKVM 276
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
+ GI+T +DI R+IA+ L D T V K+MT +P T D+ ++AL+ M + KF HLPV
Sbjct: 247 VQGILTSRDILMRMIAKNLPADSTPVDKVMTLDPDCATVDTPILDALRTMQERKFLHLPV 306
Query: 154 VE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET-L 211
++ +G ++ I+D+ + AIS +E + S AA+ ++R W S + ET
Sbjct: 307 MDRDGSIVCIVDVIDITHAAISIVESSGGGVSNDDAAISMIQRFWDSAMALEPLDDETDS 366
Query: 212 RERMFKPSLSTIITE-NAKVAIVSPSDPVAVAAKKMREFR 250
+ +M + S S I++E N + A P P A+ + K+++ R
Sbjct: 367 QSQMSEASRSQIMSEVNHEAAGAEPPYP-ALFSFKLQDRR 405
>gi|147799151|emb|CAN63699.1| hypothetical protein VITISV_002255 [Vitis vinifera]
Length = 1035
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/194 (81%), Positives = 169/194 (87%), Gaps = 8/194 (4%)
Query: 10 SQKRAPST-SKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGT 68
SQKR PST SK+ +ENG + +K SP + V G RTVKKLRLSKALTIPEGT
Sbjct: 16 SQKRGPSTASKKAVLAENGSSNAKASSP----THLVDGV---RTVKKLRLSKALTIPEGT 68
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
VSDACRRMA+RRVDAVLLTD+NALLSGIVTDKDI TRVIAE LRP+QTVVSKIMTR+PI
Sbjct: 69 TVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPI 128
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
FV SDSLAIEAL+KMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE GSAIAA
Sbjct: 129 FVNSDSLAIEALEKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEHGSAIAA 188
Query: 189 AVEGVERQWGSNFS 202
AVEGVERQWGSNF+
Sbjct: 189 AVEGVERQWGSNFT 202
>gi|297720703|ref|NP_001172713.1| Os01g0923300 [Oryza sativa Japonica Group]
gi|255674011|dbj|BAH91443.1| Os01g0923300 [Oryza sativa Japonica Group]
Length = 238
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/181 (78%), Positives = 165/181 (91%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVK+LRLSKALTIP+ T V +ACRRMA+RRVDAVLLTD+NALL GI+TDKDITTRVI
Sbjct: 58 GERTVKRLRLSKALTIPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVI 117
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
A L+ ++T VSK+MTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KC
Sbjct: 118 ARELKLEETPVSKVMTRNPLFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 177
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI+RME+AAE+G AIAAAVEGVE+ WG++ S P FIETLRERMF+PSLSTII+EN+
Sbjct: 178 LYDAIARMERAAEKGKAIAAAVEGVEKHWGASVSGPNTFIETLRERMFRPSLSTIISENS 237
Query: 229 K 229
K
Sbjct: 238 K 238
>gi|242055665|ref|XP_002456978.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
gi|241928953|gb|EES02098.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
Length = 428
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 175/198 (88%), Gaps = 3/198 (1%)
Query: 31 SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
SKP SP SS++ ERTVKKLRL++ALT+PE T VS+ACRRMA+RRVDAVLLTDA
Sbjct: 35 SKPTSPVHPSSAA---ETPERTVKKLRLARALTLPEATPVSEACRRMAARRVDAVLLTDA 91
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
+ +LSGI+T +DI RVIAEGL+PD+T ++K+MTRNP+FV S+S AIEALQKMVQGKFRH
Sbjct: 92 SGMLSGILTAEDIAGRVIAEGLKPDETYMAKVMTRNPVFVMSNSSAIEALQKMVQGKFRH 151
Query: 151 LPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET 210
LPVVE+GEVIA++DI K LYDAISRMEKAAEQGSAIAAA+EGVERQWG++F P+AF+E+
Sbjct: 152 LPVVEHGEVIAMVDIKKFLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHAFMES 211
Query: 211 LRERMFKPSLSTIITENA 228
LR++MFKPSLST+ITEN+
Sbjct: 212 LRQQMFKPSLSTVITENS 229
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 238 PVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
PV+ A ++M R ++ L+ S + GILT++D+ RV+A+ L P+ T + + + R
Sbjct: 70 PVSEACRRMAARRVDAVLLTDASGMLSGILTAEDIAGRVIAEGLKPDETYMAKVMTR 126
>gi|413920808|gb|AFW60740.1| hypothetical protein ZEAMMB73_016218 [Zea mays]
Length = 551
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 192/245 (78%), Gaps = 10/245 (4%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVK+LRLS+ALT+PE T V + CRRMA+RR DA LLTD+NALL GI+TDKDI TRV
Sbjct: 45 GGERTVKRLRLSRALTVPESTTVLEVCRRMAARRADAALLTDSNALLCGILTDKDIATRV 104
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IA L+ D+T V K+MTR+PIFV SD+LA+EALQKMVQGKFRHLPVV+NGEV+A+LDI K
Sbjct: 105 IARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQGKFRHLPVVDNGEVVAMLDIAK 164
Query: 168 CLYDAISRMEKAAEQG-SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
CLYDAISRME+A+E+G +AIA G ++ Y+ +E L+E+MF+P LS II E
Sbjct: 165 CLYDAISRMERASEKGKAAIANVAAGDDK---------YSIVEALKEQMFRPCLSAIIGE 215
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
++ V +VSP D V A K+M E + SA++ GSK QGILTS+D+LMR+VA+NLS + T
Sbjct: 216 DSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQGILTSRDILMRLVAKNLSADATP 275
Query: 287 VERFI 291
VE+ +
Sbjct: 276 VEKVM 280
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI R++A+ L D T V K+MT +P F T D ++AL+ M + KF HLPV++
Sbjct: 253 GILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMD 312
>gi|413920807|gb|AFW60739.1| hypothetical protein ZEAMMB73_016218 [Zea mays]
Length = 564
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 192/245 (78%), Gaps = 10/245 (4%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVK+LRLS+ALT+PE T V + CRRMA+RR DA LLTD+NALL GI+TDKDI TRV
Sbjct: 45 GGERTVKRLRLSRALTVPESTTVLEVCRRMAARRADAALLTDSNALLCGILTDKDIATRV 104
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IA L+ D+T V K+MTR+PIFV SD+LA+EALQKMVQGKFRHLPVV+NGEV+A+LDI K
Sbjct: 105 IARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQGKFRHLPVVDNGEVVAMLDIAK 164
Query: 168 CLYDAISRMEKAAEQG-SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
CLYDAISRME+A+E+G +AIA G ++ Y+ +E L+E+MF+P LS II E
Sbjct: 165 CLYDAISRMERASEKGKAAIANVAAGDDK---------YSIVEALKEQMFRPCLSAIIGE 215
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
++ V +VSP D V A K+M E + SA++ GSK QGILTS+D+LMR+VA+NLS + T
Sbjct: 216 DSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQGILTSRDILMRLVAKNLSADATP 275
Query: 287 VERFI 291
VE+ +
Sbjct: 276 VEKVM 280
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI R++A+ L D T V K+MT +P F T D ++AL+ M + KF HLPV++
Sbjct: 253 GILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMD 312
>gi|226501000|ref|NP_001145716.1| uncharacterized protein LOC100279220 [Zea mays]
gi|219884141|gb|ACL52445.1| unknown [Zea mays]
Length = 551
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 10/245 (4%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVK+LRLS+ALT+PE T V + CRRMA+RR DA LLTD+NALL GI+TDKDI TRV
Sbjct: 45 GGERTVKRLRLSRALTVPESTTVLEVCRRMAARRADAALLTDSNALLCGILTDKDIATRV 104
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IA L+ D+T V K+MTR+PIFV SD+LA+EALQKMVQGKFRHLPV +NGEV+A+LDI K
Sbjct: 105 IARELKIDETPVWKVMTRHPIFVLSDTLAVEALQKMVQGKFRHLPVADNGEVVAMLDIAK 164
Query: 168 CLYDAISRMEKAAEQG-SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
CLYDAISRME+A+E+G +AIA G ++ Y+ +E L+E+MF+P LS II E
Sbjct: 165 CLYDAISRMERASEKGKAAIANVAAGDDK---------YSIVEALKEQMFRPCLSAIIGE 215
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
++ V +VSP D V A K+M E + SA++ GSK QGILTS+D+LMR+VA+NLS + T
Sbjct: 216 DSTVVMVSPGDSVLAATKRMVEAHATSAVVAVGSKPQGILTSRDILMRLVAKNLSADATP 275
Query: 287 VERFI 291
VE+ +
Sbjct: 276 VEKVM 280
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI R++A+ L D T V K+MT +P F T D ++AL+ M + KF HLPV++
Sbjct: 253 GILTSRDILMRLVAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMD 312
>gi|219363345|ref|NP_001136492.1| uncharacterized protein LOC100216607 [Zea mays]
gi|194695914|gb|ACF82041.1| unknown [Zea mays]
Length = 416
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 146/169 (86%)
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MTRNP +V +D+ AIEAL KMVQGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKAAEQ
Sbjct: 1 MTRNPSYVMADTPAIEALHKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQ 60
Query: 183 GSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVA 242
GSA+AAA+EGVERQ G NFS P+ +ETLRERMFKPSLSTIITEN KVA VS SDPV VA
Sbjct: 61 GSALAAAIEGVERQLGGNFSGPHNLLETLRERMFKPSLSTIITENTKVATVSLSDPVCVA 120
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+KMR+ R NS +I+ G+ + GI TSKDVLMRVVAQNLSPELTLVE+ +
Sbjct: 121 TRKMRDLRVNSVIIMAGNSLHGIFTSKDVLMRVVAQNLSPELTLVEKVM 169
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++ N+L GI T KD+ RV+A+ L P+ T+
Sbjct: 106 TKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL-HGIFTSKDVLMRVVAQNLSPELTL 164
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V K+MT +P T D+ ++AL M GKF H+PV++ +G+V A LD+ + + AIS +E
Sbjct: 165 VEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGDGQVAACLDVLQLTHAAISMVE 224
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAP 204
+ +A + +++ W S P
Sbjct: 225 GGPGGANDVANTI--MQKFWDSALEPP 249
>gi|356518878|ref|XP_003528104.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSCBSPB5-like [Glycine max]
Length = 597
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 182/242 (75%), Gaps = 5/242 (2%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GERTVK L L+KALT+PE T V +AC RM +RR DA+LLTD+NALL GI+T KDI RV
Sbjct: 92 AGERTVKSLXLTKALTVPETTTVYEACHRMVARRGDALLLTDSNALLCGILTHKDIAARV 151
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
IA+ + ++T VSK+MTRNP+FV S++LA EALQKMVQG + L + E +A DI
Sbjct: 152 IAKEINLEETPVSKVMTRNPVFVLSETLAAEALQKMVQGWYXLLFCILPFEYMA--DI-- 207
Query: 168 CLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITEN 227
CL+DAI+RME+AAE+G AIAAAVEGVE+ WG++ S +FIE+LR ++FK SLSTII EN
Sbjct: 208 CLHDAIARMERAAEKGXAIAAAVEGVEKHWGTSDSNT-SFIESLRXQIFKLSLSTIIPEN 266
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+K+ VSP+D + KKM EFR++ A++ K GI SKD+L+RV+AQNLSPE T V
Sbjct: 267 SKLVTVSPTDSILTTRKKMVEFRASCAVVTFNDKPLGIFISKDILLRVIAQNLSPESTPV 326
Query: 288 ER 289
E+
Sbjct: 327 EK 328
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P +I++ ++M R ++T + L GI KDI RVIA+ L P+ T
Sbjct: 267 SKLVTVSPTDSILTTR-KKMVEFRASCAVVTFNDKPL-GIFISKDILLRVIAQNLSPEST 324
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
V K+MT N + V D+ ++AL M GKF HLP V+
Sbjct: 325 PVEKVMTPNSVCVVIDTPIVDALHTMHDGKFLHLPAVD 362
>gi|222616000|gb|EEE52132.1| hypothetical protein OsJ_33959 [Oryza sativa Japonica Group]
Length = 542
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 183/242 (75%), Gaps = 2/242 (0%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ERTV++LRLSKALT+PE T V +ACRRMA+RR DA LLTD+NALL GI+TDKDI TRVIA
Sbjct: 40 ERTVRRLRLSKALTVPESTTVLEACRRMAARRADAALLTDSNALLCGILTDKDIATRVIA 99
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
L+ ++T K+MTR+P+FV S++LA+EAL KMVQGKFRHLPVVENGEVIA+LDI KCL
Sbjct: 100 RELKIEETPAWKVMTRHPVFVPSETLAVEALHKMVQGKFRHLPVVENGEVIAMLDIAKCL 159
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAK 229
YDAI+R+E+A+++G A A A N + +E +E+M +PSLSTI T +
Sbjct: 160 YDAIARIERASDKGKAAAIASAVDAAA--GNDPTASSMVEAFKEQMLRPSLSTITTAEST 217
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
V IVSP D V A +KM E ++SA++ G+K QGILTS+D+LMR++A+NL + T VE+
Sbjct: 218 VVIVSPGDSVLTATQKMVEVHASSAVVAVGNKAQGILTSRDILMRMIAKNLPADSTPVEK 277
Query: 290 FI 291
+
Sbjct: 278 VM 279
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI R+IA+ L D T V K+MT +P T D ++AL+ M + KF HLPV++
Sbjct: 252 GILTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRIMQERKFLHLPVMD 311
Query: 156 -NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
+G +++ILD+ + A S +E + AA+ V+R W S
Sbjct: 312 RDGSIVSILDVIDITHAAFSIVEGNGDGAVNDDAAISMVQRFWDS 356
>gi|218185780|gb|EEC68207.1| hypothetical protein OsI_36187 [Oryza sativa Indica Group]
Length = 575
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 183/255 (71%), Gaps = 15/255 (5%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDK-------- 101
ERTV++LRLSKALT+PE T V +ACRRMA+RR DA LLTD+NALL GI+TDK
Sbjct: 48 ERTVRRLRLSKALTVPESTTVLEACRRMAARRADAALLTDSNALLCGILTDKACTPPKEH 107
Query: 102 -----DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
DI TRVIA L+ D+T K+MTR+P+FV S++LA+EAL KMVQGKFRHLPVVEN
Sbjct: 108 WMINQDIATRVIARELKIDETPAWKVMTRHPVFVPSETLAVEALHKMVQGKFRHLPVVEN 167
Query: 157 GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMF 216
GEVIA+LDI KCLYDAI+R+E+A+++G A A A N + +E +E+M
Sbjct: 168 GEVIAMLDIAKCLYDAIARIERASDKGKAAAIASAVDAAA--GNDPTASSMVEAFKEQML 225
Query: 217 KPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVV 276
+PSLSTI T + V IVSP D V A +KM E ++SA++ G+K QGILTS+D+LMR++
Sbjct: 226 RPSLSTITTAESTVVIVSPGDSVLTATQKMVEVHASSAVVAVGNKAQGILTSRDILMRMI 285
Query: 277 AQNLSPELTLVERFI 291
A+NL + T VE+ +
Sbjct: 286 AKNLPADSTPVEKVM 300
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI R+IA+ L D T V K+MT +P T D ++AL+ M + KF HLPV++
Sbjct: 273 GILTSRDILMRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRTMQERKFLHLPVMD 332
Query: 156 -NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS 199
+G +++ILD+ + A S +E E AA+ V+R W S
Sbjct: 333 RDGSIVSILDVIDITHAAFSIVEGNGEGAMNDDAAISMVQRFWDS 377
>gi|413922419|gb|AFW62351.1| hypothetical protein ZEAMMB73_157791 [Zea mays]
Length = 247
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/149 (73%), Positives = 127/149 (85%)
Query: 143 MVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFS 202
++QGKFRHLPVVENGEVIA+LDI KCLYDAISR+EKA EQGS +AA++EGVE Q G NFS
Sbjct: 33 IIQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAVEQGSVLAASIEGVECQLGGNFS 92
Query: 203 APYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKI 262
AP+ +ETLRERMFK SLSTIITEN KVA VS SDPV VA +KMR+ R NS +I+ G+ +
Sbjct: 93 APHNLLETLRERMFKRSLSTIITENTKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL 152
Query: 263 QGILTSKDVLMRVVAQNLSPELTLVERFI 291
GI TSKDVLMRVVAQN+SPELTLVE+ +
Sbjct: 153 HGIFTSKDVLMRVVAQNISPELTLVEKVM 181
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+K T+ V A R+M RV++V++ N+L GI T KD+ RV+A+ + P+ T+
Sbjct: 118 TKVATVSLSDPVCVATRKMRDLRVNSVIIMAGNSL-HGIFTSKDVLMRVVAQNISPELTL 176
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE 158
V K+MT +P T D+ ++AL M GKF H+PV++ +
Sbjct: 177 VEKVMTAHPDCATLDTTILDALHIMHDGKFLHIPVLDGAK 216
>gi|302798198|ref|XP_002980859.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
gi|300151398|gb|EFJ18044.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
Length = 427
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 163/245 (66%), Gaps = 2/245 (0%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
G R+V KLR +KAL I + + V+DACRRMA+ R+DAVLLTD++++L GI TDKD+ RVI
Sbjct: 1 GRRSVAKLRPAKALIIRDSSSVADACRRMAAARIDAVLLTDSDSVLCGIFTDKDVVARVI 60
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
A+GL+P++T VS +MTRNP+++ SD+LA AL+KM++GKFRHLPVV+NG+VIA++++ KC
Sbjct: 61 AKGLKPEETCVSSVMTRNPVYIPSDALADHALRKMIRGKFRHLPVVDNGQVIALVNMKKC 120
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYDAI +E ++ AA GSN S + ++ + L + N
Sbjct: 121 LYDAIVTLE--WHMAASFAAMHPEKSTSPGSNISTDVRIFDNAIFQVSEGCLQLTLNLNC 178
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
+ P++ V A KKM EF S+ ++ +G GI TSKD+LMRVVA+ L P T +E
Sbjct: 179 SAVTICPNETVDTATKKMLEFSSDYVIVASGRNPVGIFTSKDLLMRVVAKGLCPTSTAIE 238
Query: 289 RFIMR 293
+ + R
Sbjct: 239 KVMTR 243
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+TI V A ++M D V++ + GI T KD+ RV+A+GL P T +
Sbjct: 180 AVTICPNETVDTATKKMLEFSSDYVIVASGRNPV-GIFTSKDLLMRVVAKGLCPTSTAIE 238
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDITKC 168
K+MTRN + D+ ++AL M G+F HLP+++ ++++ + +C
Sbjct: 239 KVMTRNVECASLDTAVVDALHIMHDGRFCHLPILDQDRNVVGCVSVMALVEC 290
>gi|242070995|ref|XP_002450774.1| hypothetical protein SORBIDRAFT_05g017490 [Sorghum bicolor]
gi|241936617|gb|EES09762.1| hypothetical protein SORBIDRAFT_05g017490 [Sorghum bicolor]
Length = 511
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 153/217 (70%), Gaps = 37/217 (17%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
GGERTVK+LRLS+ALT+PE T V + CRRMA+RR DA LLTD+NALL GI+TDKDI TRV
Sbjct: 49 GGERTVKRLRLSRALTVPESTTVLEVCRRMAARRADAALLTDSNALLCGILTDKDIATRV 108
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ---------------------- 145
IA L+ D+T V K+MTR+PIFV SD+LA+EALQKMVQ
Sbjct: 109 IARELKIDETPVWKVMTRHPIFVISDTLAVEALQKMVQGTCPIPFPSRGHACALTTDFMH 168
Query: 146 ---GKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQG-SAIAAAVEGVERQWGSNF 201
GKFRHLPVV+NGEV+A+LDI KCLYDAI+RME+A E+G +AIA G ++
Sbjct: 169 ASSGKFRHLPVVDNGEVVAMLDIAKCLYDAIARMERATEKGKAAIANVAAGDDK------ 222
Query: 202 SAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDP 238
Y+ +E L+E+MF+P LS I +E++ + +++P DP
Sbjct: 223 ---YSIVEALKEQMFRPCLSAIASEDSTL-VMTP-DP 254
>gi|302815219|ref|XP_002989291.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
gi|300142869|gb|EFJ09565.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
Length = 406
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 153/218 (70%), Gaps = 7/218 (3%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA+ R+DAVLLTD++++L GI TDKD+ RVIA+GL+P++T VS +MTRNP+++ SD+LA
Sbjct: 1 MAAARIDAVLLTDSDSVLCGIFTDKDVVARVIAKGLKPEETCVSSVMTRNPVYIASDALA 60
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
AL+KM++GKFRHLPVV+NG+VI+++++ KCLYDAI +E +AA+ + +
Sbjct: 61 DHALRKMIRGKFRHLPVVDNGQVISLVNMKKCLYDAIVTLEW------HMAASFAAMHPE 114
Query: 197 WGSNFSAPYA-FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSAL 255
G+ F + IE LR++ F+P+L ++I ++ + P++ V A KKM EF S+ +
Sbjct: 115 KGTCFFFFFFPSIEALRDQTFQPTLGSLIMQSFNAVTICPNETVDTATKKMLEFSSDYVI 174
Query: 256 IVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
+ +G GI TSKD+LMRVVA+ L P T +E+ + R
Sbjct: 175 VASGRNPVGIFTSKDLLMRVVAKGLCPTSTTIEKVMTR 212
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
A+TI V A ++M D V++ + GI T KD+ RV+A+GL P T +
Sbjct: 148 NAVTICPNETVDTATKKMLEFSSDYVIVASGRNPV-GIFTSKDLLMRVVAKGLCPTSTTI 206
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
K+MTRN + D+ ++AL M G+F HLP+++
Sbjct: 207 EKVMTRNVECASLDTAVVDALHIMHDGRFCHLPILD 242
>gi|384499448|gb|EIE89939.1| hypothetical protein RO3G_14650 [Rhizopus delemar RA 99-880]
Length = 594
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR ++A+T+ E V ++ + M+++R D VL+ + LSGI T KDI RV+AEG
Sbjct: 58 TVSALRPNQAVTVKESMPVIESAQFMSAKRCDCVLVVNEEDQLSGIFTAKDIAYRVVAEG 117
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T+VS+IMT+NP+ VTSD+ A EAL MV FRHLPV E G++ +LDITKCLY
Sbjct: 118 LDARTTIVSQIMTKNPLCVTSDTSATEALDLMVTRGFRHLPVCNEEGDIFGLLDITKCLY 177
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQW-GSNFSAPYAFIETLRERMFKPSLSTII--TEN 227
+A+ +ME+A + A+EGVER+W G + ++E LRE M P+L +++ T
Sbjct: 178 EALEKMERAFGSSRKLYDALEGVEREWAGESTGQMNEYMENLRESMSCPTLESVLDGTPP 237
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
A+V + +AV M+E R+ + L+ K+QGI TSKD+++RV+A L+PE V
Sbjct: 238 AQVRYKTNVKEIAVM---MKELRTTAVLVTKSHKLQGIFTSKDIVLRVIAAGLNPENCTV 294
Query: 288 ERFI 291
R +
Sbjct: 295 ARVM 298
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M R AVL+T ++ L GI T KDI RVIA GL P+ V+++MT P ++
Sbjct: 253 MKELRTTAVLVTKSHKL-QGIFTSKDIVLRVIAAGLNPENCTVARVMTPTPDTAAPETTV 311
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
++AL+ M G + +LPV+ +G +I ++D+ K Y + +M
Sbjct: 312 LDALKLMNNGHYLNLPVIGHGTIIGMVDVLKLTYVTLEQM 351
>gi|384494220|gb|EIE84711.1| hypothetical protein RO3G_09421 [Rhizopus delemar RA 99-880]
Length = 370
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 150/233 (64%), Gaps = 2/233 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR ++ALT+ E +V +A + MA++R D VL+ D L+GI T KD+ RV+A+
Sbjct: 71 TVSALRPAQALTLKENILVIEAAQLMAAKRSDCVLVVDDEEHLNGIFTAKDLAYRVVADN 130
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T VS IMTRNP+ VT+D+ A +AL MV FRHLPV E G++ +LDITKC+Y
Sbjct: 131 LDARSTTVSDIMTRNPMCVTADTCAQDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCIY 190
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
+A+ +MEKA + A+EGVER+W ++ ++ETL+++M P L++++T + V
Sbjct: 191 EALHKMEKAYGSSRKLYDALEGVEREWANSPVQLVQYMETLKDKMSCPDLTSVLTHHEPV 250
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
VS V AK M+E+ + + L++ + + GI TSKD+ +RV+A L+P+
Sbjct: 251 Q-VSLKTQVREVAKLMKEYHTTAVLVMDHNGLAGIFTSKDIALRVIAAGLAPD 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V + + M AVL+ D N L +GI T KDI RVIA GL PD V ++MT +P
Sbjct: 256 TQVREVAKLMKEYHTTAVLVMDHNGL-AGIFTSKDIALRVIAAGLAPDNCSVVRVMTPHP 314
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ ++AL+KM G + +LPV+ E+ ++ ++D+ + Y
Sbjct: 315 DTALPSTSILDALKKMHDGHYLNLPVLDEDKNLVGLIDVLRLTY 358
>gi|384501963|gb|EIE92454.1| hypothetical protein RO3G_16976 [Rhizopus delemar RA 99-880]
Length = 719
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 151/241 (62%), Gaps = 2/241 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+ALT+ E +V +A + +A++R D VL+ D LSGI T KD+ RV+AE
Sbjct: 70 TVSALRPSQALTVKENMLVIEAAQLLAAKRSDCVLVVDDEEHLSGIFTAKDLAYRVVAES 129
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T V+KIMT+ P+ VTSD+ A +AL MV FRHLPV E G++ +LDITKCLY
Sbjct: 130 LDARNTTVAKIMTKGPMCVTSDTSATDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCLY 189
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
+A+ +ME+A + A+EGVE++W ++ ++E LR++M P LST++ +A
Sbjct: 190 EALDKMERAFGSSRKLYDALEGVEKEWNNSPIQLVQYMEALRDKMECPDLSTVLDGHAPP 249
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERF 290
+ ++ V A+ M+E+ + + L+ + GI T+KDV++RV+A L+PE V R
Sbjct: 250 EVNVKTN-VREVARMMKEYHTTAVLVTDREGLAGIFTTKDVVLRVIAPGLNPENCSVVRV 308
Query: 291 I 291
+
Sbjct: 309 M 309
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V + R M AVL+TD L +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 255 TNVREVARMMKEYHTTAVLVTDREGL-AGIFTTKDVVLRVIAPGLNPENCSVVRVMTPHP 313
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
+ ++AL+KM G + +LP+VE G+V+ ++D+ K Y + ++
Sbjct: 314 DTAPAQMSIMDALRKMHDGHYLNLPIVEEGDVVGMVDVLKLTYATLEQI 362
>gi|402220904|gb|EJU00974.1| CBS-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 683
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 158/267 (59%), Gaps = 13/267 (4%)
Query: 38 GESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGI 97
G +V G + TV L+ S ALT+PE VSDA + A++R D VL+ D + LSGI
Sbjct: 79 GTKKKTVKNDGRKGTVAALKPSPALTVPESITVSDASQLCAAKRTDCVLVVDDDEGLSGI 138
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-EN 156
T KD+ RV AEGL P T VS IMTR+P+ + A +ALQ MV FRHLPV E+
Sbjct: 139 FTAKDLAFRVTAEGLDPRTTPVSTIMTRSPMVTRDTTSATDALQLMVSRGFRHLPVCNED 198
Query: 157 GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP------YAFIET 210
G V+ +LDITK ++A+ ++E+ + + +A+EGV+ + G N SA A++E
Sbjct: 199 GNVVGLLDITKVFHEALDKVERGSSASQKLYSALEGVQSELGDNISANPQAAAMLAYVEA 258
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--TGS----KIQG 264
LR++ P L++++ + A+VSP V AAK M+E R+ S ++ TG+ KI G
Sbjct: 259 LRDKTALPDLTSVMDARTRPAMVSPKTTVREAAKLMKESRTTSVCVMENTGATSPPKIVG 318
Query: 265 ILTSKDVLMRVVAQNLSPELTLVERFI 291
I TSKDV++RV+A L P V R +
Sbjct: 319 IFTSKDVVLRVIAAGLEPNRCSVVRVM 345
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----GIVTDKDITTR 106
+V R A+ P+ T V +A + M R +V + + S GI T KD+ R
Sbjct: 270 SVMDARTRPAMVSPK-TTVREAAKLMKESRTTSVCVMENTGATSPPKIVGIFTSKDVVLR 328
Query: 107 VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDI 165
VIA GL P++ V ++MT +P +AL+KM G + +LPVV E+G ++AI+D+
Sbjct: 329 VIAAGLEPNRCSVVRVMTPHPDVAPPTMTIHDALKKMYTGHYLNLPVVEEDGRLVAIVDV 388
Query: 166 TKCLYDAISRMEKAAEQGSAIAAAVEGVERQ----WGSNFSA 203
K Y + EQ +A++A +G E+ WG F +
Sbjct: 389 LKLTYATL-------EQMTAMSAQTDGEEQHTGPMWGKFFDS 423
>gi|384495647|gb|EIE86138.1| hypothetical protein RO3G_10849 [Rhizopus delemar RA 99-880]
Length = 486
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 147/233 (63%), Gaps = 2/233 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+ALT+ E +V +A + +A++R D VL+ D LSGI T KD+ RV+AE
Sbjct: 67 TVSALRPSQALTVKENMLVIEAAQLLAAKRSDCVLVVDDEEHLSGIFTAKDLAYRVVAEC 126
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T V+KIMT+ P+ VTSD+ A +AL MV FRHLPV E G++ +LDITKCLY
Sbjct: 127 LDARNTTVAKIMTKGPMCVTSDTSATDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCLY 186
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
+A+ +ME+A + A+EGVE++W ++ ++E LR++M P L++++ A
Sbjct: 187 EALDKMERAFGSSRKLYDALEGVEKEWNNSPIQLVQYMEALRDKMECPDLNSVLDGQAP- 245
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
A VS V A+ M+++ + + L+ + GI T+KDV++RV+A L+PE
Sbjct: 246 AEVSVKTNVREVARMMKDYHTTAVLVTDREGLAGIFTTKDVVLRVIAAGLNPE 298
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V + R M AVL+TD L +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 252 TNVREVARMMKDYHTTAVLVTDREGL-AGIFTTKDVVLRVIAAGLNPENCSVVRVMTPHP 310
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
D ++AL+KM G + +LPVV+NG+V+ I+D+ K Y
Sbjct: 311 DTAPPDMSIMDALKKMHDGHYLNLPVVDNGDVLGIVDVLKLTY 353
>gi|443926166|gb|ELU44888.1| CBS and PB1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 566
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 149/250 (59%), Gaps = 10/250 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PE VSDA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 91 TVAALRPSPALTVPENMTVSDASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAFRVSAEG 150
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
L P T VS+IMTR P+ + A EALQ MVQ FRHLPV + G V+ +LDITK +
Sbjct: 151 LDPRTTPVSQIMTRGPMVTRDTTSATEALQLMVQRGFRHLPVCNDEGNVVGLLDITKVFH 210
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFS----APYAFIETLRERMFKPSLSTIITE 226
+A+ ++E+ + + + AA+EGV+ + G+ + A +++ +LRE+ P L+T++
Sbjct: 211 EALEKLERGSSASAKLHAALEGVQSELGNGLNPQAMAMMSYVASLREKTTLPDLTTVMDS 270
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVT-----GSKIQGILTSKDVLMRVVAQNLS 281
+ A VSP V AAK M+E R+ + I+ KI GI TSKDV++RV+A L
Sbjct: 271 RTQPATVSPRSTVRDAAKLMKENRTTAVCIMEPLQGGPPKIAGIFTSKDVVLRVIAAGLD 330
Query: 282 PELTLVERFI 291
P V R +
Sbjct: 331 PNRCSVVRVM 340
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD----ANALLSGIVTDKDITTRV 107
TV R A P T V DA + M R AV + + ++GI T KD+ RV
Sbjct: 266 TVMDSRTQPATVSPRST-VRDAAKLMKENRTTAVCIMEPLQGGPPKIAGIFTSKDVVLRV 324
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDIT 166
IA GL P++ V ++MT +P +AL+KM G++ +LPVVE +G+++AI+D+
Sbjct: 325 IAAGLDPNRCSVVRVMTPHPDVAEPSMTVHDALKKMYVGRYLNLPVVEGDGKLVAIVDVL 384
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVER--QWGSNFSA 203
K Y + EQ ++++ + E WG F +
Sbjct: 385 KLTYATL-------EQINSLSGGDQTEESGPMWGRFFDS 416
>gi|393247785|gb|EJD55292.1| CBS-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 650
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 144/242 (59%), Gaps = 11/242 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PE VSDA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 60 TVAALRPSPALTVPESMTVSDASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAYRVAAEG 119
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS IMTRNP+ + A EAL+ MVQ FRHLPV E+G V+ +LDITK +
Sbjct: 120 LDPRNTPVSAIMTRNPMVTRDTTGATEALELMVQRHFRHLPVCNEDGNVVGLLDITKVFH 179
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP------YAFIETLRERMFKPSLSTII 224
+A+ ++E+ + + A+EGV+ + G+ +A A++E LRE+ P L++++
Sbjct: 180 EALEKVERGSSASLKLYNALEGVQSELGAGLAANPQAAAMLAYVEALREKTALPDLTSVM 239
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS----KIQGILTSKDVLMRVVAQNL 280
A V P V A K M+EFR+ + ++ + +I GI TSKDV++RV+A L
Sbjct: 240 DSRTNPATVGPRTTVREATKLMKEFRTTAVCVMEKNGPEERIVGIFTSKDVVLRVIAAGL 299
Query: 281 SP 282
P
Sbjct: 300 DP 301
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
T V +A + M R AV + + N + GI T KD+ RVIA GL P + V ++MT
Sbjct: 252 TTVREATKLMKEFRTTAVCVMEKNGPEERIVGIFTSKDVVLRVIAAGLDPGRCSVVRVMT 311
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK-AAEQ 182
+P +AL+KM G++ +LPV+E +G ++AI+D+ K Y + M AE
Sbjct: 312 PHPDVAPPTMTVQDALKKMHNGRYLNLPVIESDGRLVAIVDVLKLTYATLEHMNTMGAES 371
Query: 183 GSA 185
G +
Sbjct: 372 GGS 374
>gi|449550757|gb|EMD41721.1| hypothetical protein CERSUDRAFT_110295 [Ceriporiopsis subvermispora
B]
Length = 704
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 166/299 (55%), Gaps = 24/299 (8%)
Query: 2 SSQGGSRRSQKRAPSTSKRTSSSENGGNLSKP---PSPQGESSSSVGGAGG--ERTVKKL 56
SS SRR Q R ++ SE LS+ + QG+S GG + TV L
Sbjct: 52 SSYADSRRKQSRRDEAIRKKIESE----LSRKRTISTTQGQSGRKRGGKANVQKGTVAAL 107
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
+ S ALT+PE VS+A + A++R D VL+ D + LSGI T KD+ RV AEGL P
Sbjct: 108 KPSPALTVPENITVSEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEGLDPHT 167
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISR 175
T VS IMTRNP+ + A EALQ MVQ FRHLPV E G V+ +LDITK ++A+ +
Sbjct: 168 TQVSTIMTRNPMVTRDTTSATEALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALDK 227
Query: 176 MEKAAEQGSAIAAAVEGVERQWGSNFS------APYAFIETLRERMFKPSLSTIITENAK 229
+E+++ + +A+ GV+ + G S A +++E LRE+ P L++I+ +
Sbjct: 228 VERSSSASEKLYSALAGVQSELGGGLSTNPQAAAMLSYVEALREKTALPDLTSIMDSRTQ 287
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIV--------TGSKIQGILTSKDVLMRVVAQNL 280
A V P V AK M+E R+ + ++ T SKI GI TSKD+++RV+A L
Sbjct: 288 PATVGPKTTVREVAKLMKERRTTAVCVMEPSGAAPGTPSKIAGIFTSKDIVLRVIAAGL 346
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAGGERT-------VKKLRLSKALTIPEGTIVSDACRR 76
SE GG LS +PQ + S A E+T + R A P+ T V + +
Sbjct: 247 SELGGGLST--NPQAAAMLSYVEALREKTALPDLTSIMDSRTQPATVGPK-TTVREVAKL 303
Query: 77 MASRRVDAVLLTDANAL-------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
M RR AV + + + ++GI T KDI RVIA GL + V ++MT +P
Sbjct: 304 MKERRTTAVCVMEPSGAAPGTPSKIAGIFTSKDIVLRVIAAGLDATRCSVVRVMTPHPDT 363
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ +AL+KM G + +LPVVE +G ++AI+D+ K Y + +M + + S AA
Sbjct: 364 APPTTTCHDALKKMHNGHYLNLPVVEADGRLVAIVDVLKLTYATLEQMNAISAEASGEAA 423
Query: 189 AVEGVERQWGSNF 201
EG WG F
Sbjct: 424 EHEGGP-MWGRFF 435
>gi|393218841|gb|EJD04329.1| CBS-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 677
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 153/274 (55%), Gaps = 27/274 (9%)
Query: 32 KPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDAN 91
KP +P+G +V L+ S ALT+PEG VSDA + A++R D VL+ D
Sbjct: 52 KPSAPKG-------------SVAALKPSPALTVPEGITVSDASQLCAAKRTDCVLVVDEE 98
Query: 92 ALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHL 151
LSGI T KD+ RV AEGL P T VS IMTRNP+ + A EALQ MV FRHL
Sbjct: 99 EGLSGIFTAKDLAYRVTAEGLDPRSTPVSAIMTRNPMVTRDTTSATEALQLMVTRHFRHL 158
Query: 152 PVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP------ 204
PV E G V+ +LDITK ++A+ ++E+++ + A+ GV+ + G N SA
Sbjct: 159 PVCNEEGNVVGLLDITKVFHEALDKVERSSSASEKLYHALTGVQTELGPNMSANPQAAAM 218
Query: 205 YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS---- 260
A+++ LRE+ P L++++ A VSP V AAK M+E R+ + ++ +
Sbjct: 219 LAYVDALREKTALPDLTSVMDSRTHPATVSPKTTVKEAAKLMKENRTTAVCVMENTGVPG 278
Query: 261 ---KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+I GI TSKD+++RV+A L P V R +
Sbjct: 279 APPRIAGIFTSKDIVLRVIAAGLEPSRCSVVRVM 312
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANAL------LSGIVTDKDITTRVIAEGLRPDQ 116
T+ T V +A + M R AV + + + ++GI T KDI RVIA GL P +
Sbjct: 246 TVSPKTTVKEAAKLMKENRTTAVCVMENTGVPGAPPRIAGIFTSKDIVLRVIAAGLEPSR 305
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISR 175
V ++MT +P + +AL+KM G + +LPVVE +G ++AI+D+ K Y + +
Sbjct: 306 CSVVRVMTPHPDTAAPTMIVQDALKKMYNGHYLNLPVVEADGRLVAIVDVLKLTYATLEQ 365
Query: 176 MEK-AAEQG 183
M++ AAE G
Sbjct: 366 MDQMAAETG 374
>gi|58261288|ref|XP_568054.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57230136|gb|AAW46537.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 831
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 151/252 (59%), Gaps = 23/252 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG V+DA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 209 TVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEG 268
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V++IMT+NP+ + A EALQ MV FRHLPV E+G+V+ +LDITK +
Sbjct: 269 LDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFH 328
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A++++E+ + S ++AA+ GV+ + G +A A++ETLRERM P L+T+I
Sbjct: 329 EALAKVERGSTATSQLSAALAGVQSELGPGLNHNPQAAAMLAYVETLRERMALPDLTTVI 388
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALI------------VTGS----KIQGILTS 268
+ V+P V AA+ M+E R+ + + V+G KI GI TS
Sbjct: 389 DTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTS 448
Query: 269 KDVLMRVVAQNL 280
KD+++RV+A L
Sbjct: 449 KDIVLRVIAAGL 460
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANA---------------LLSGIVTDKDITTRVIAEGL 112
T V +A R M RR AV + +ANA ++GI T KDI RVIA GL
Sbjct: 401 TTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRVIAAGL 460
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYD 171
+ V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+ K Y
Sbjct: 461 DASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 520
Query: 172 AISRME-----KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTI 223
+ ++E ++ E G + EG+ G + + A I + ER PS S +
Sbjct: 521 TLEQIESMNEDRSNESGPMWSRFFEGLPGAGGDDDT---ASIVSASERPDTPSRSHL 574
>gi|134115681|ref|XP_773554.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256180|gb|EAL18907.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 831
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 151/252 (59%), Gaps = 23/252 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG V+DA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 209 TVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEG 268
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V++IMT+NP+ + A EALQ MV FRHLPV E+G+V+ +LDITK +
Sbjct: 269 LDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFH 328
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A++++E+ + S ++AA+ GV+ + G +A A++ETLRERM P L+T+I
Sbjct: 329 EALAKVERGSTATSQLSAALAGVQSELGPGLNHNPQAAAMLAYVETLRERMALPDLTTVI 388
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALI------------VTGS----KIQGILTS 268
+ V+P V AA+ M+E R+ + + V+G KI GI TS
Sbjct: 389 DTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTS 448
Query: 269 KDVLMRVVAQNL 280
KD+++RV+A L
Sbjct: 449 KDIVLRVIAAGL 460
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANA---------------LLSGIVTDKDITTRVIAEGL 112
T V +A R M RR AV + +ANA ++GI T KDI RVIA GL
Sbjct: 401 TTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRVIAAGL 460
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYD 171
+ V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+ K Y
Sbjct: 461 DASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVLKLTYA 520
Query: 172 AISRME-----KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTI 223
+ ++E ++ E G + EG+ G + + A I + ER PS S +
Sbjct: 521 TLEQIESMNEDRSNESGPMWSRFFEGLPGAGGDDDT---ASIVSASERPDTPSRSHL 574
>gi|58261286|ref|XP_568053.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57230135|gb|AAW46536.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 704
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 151/252 (59%), Gaps = 23/252 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG V+DA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 82 TVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEG 141
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V++IMT+NP+ + A EALQ MV FRHLPV E+G+V+ +LDITK +
Sbjct: 142 LDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFH 201
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A++++E+ + S ++AA+ GV+ + G +A A++ETLRERM P L+T+I
Sbjct: 202 EALAKVERGSTATSQLSAALAGVQSELGPGLNHNPQAAAMLAYVETLRERMALPDLTTVI 261
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALI------------VTGS----KIQGILTS 268
+ V+P V AA+ M+E R+ + + V+G KI GI TS
Sbjct: 262 DTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTS 321
Query: 269 KDVLMRVVAQNL 280
KD+++RV+A L
Sbjct: 322 KDIVLRVIAAGL 333
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANA---------------LLSGIVTDKDITTRV 107
T+ T V +A R M RR AV + +ANA ++GI T KDI RV
Sbjct: 269 TVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGIFTSKDIVLRV 328
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDIT 166
IA GL + V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+
Sbjct: 329 IAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVL 388
Query: 167 KCLYDAISRME-----KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLS 221
K Y + ++E ++ E G + EG+ G + + A I + ER PS S
Sbjct: 389 KLTYATLEQIESMNEDRSNESGPMWSRFFEGLPGAGGDDDT---ASIVSASERPDTPSRS 445
Query: 222 TIITENAKVAIVSP 235
+ ++ SP
Sbjct: 446 HLGHGRGLSSMTSP 459
>gi|414868429|tpg|DAA46986.1| TPA: hypothetical protein ZEAMMB73_412952 [Zea mays]
Length = 164
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 112/148 (75%), Gaps = 17/148 (11%)
Query: 8 RRSQKRAPSTSKRTS-----SSENG-GN---LSKPPSPQGESSSSVGGAGGERTVKKLRL 58
RR++ R PS S R S ++ NG GN +KP SP + GERTVKKLRL
Sbjct: 12 RRTRSRPPSASSRKSDDSSAAAANGNGNRKVATKPASPHQLT--------GERTVKKLRL 63
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SKALTIPEGT V DACRRMA+RRVDAVLLTD LLSGIVTDKDI TRV+AEGLR +QT+
Sbjct: 64 SKALTIPEGTTVLDACRRMAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTI 123
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQG 146
+SKIMTRNP++V SD+LAIEALQKMVQG
Sbjct: 124 MSKIMTRNPVYVMSDTLAIEALQKMVQG 151
>gi|405119601|gb|AFR94373.1| CBS and PB1 domain-containing protein [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 151/252 (59%), Gaps = 23/252 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG V+DA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 191 TVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEG 250
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V++IMT+NP+ + A EALQ MV FRHLPV E+G+V+ +LDITK +
Sbjct: 251 LDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFH 310
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A++++E+ + + ++AA+ GV+ + G +A A++ETLRERM P L+T+I
Sbjct: 311 EALAKVERGSTATNQLSAALAGVQSELGPGLNHNPQAAAMLAYVETLRERMALPDLTTVI 370
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALI------------VTGS----KIQGILTS 268
+ V+P V AA+ M+E R+ + + V+G KI GI TS
Sbjct: 371 DTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTS 430
Query: 269 KDVLMRVVAQNL 280
KD+++RV+A L
Sbjct: 431 KDIVLRVIAAGL 442
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANA---------------LLSGIVTDKDITTRV 107
T+ T V +A R M RR AV + +ANA ++GI T KDI RV
Sbjct: 378 TVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTSKDIVLRV 437
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDIT 166
IA GL + V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+
Sbjct: 438 IAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVL 497
Query: 167 KCLYDAISRME-----KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLS 221
K Y + ++E ++ E G + EG+ G + + A I + ER PS S
Sbjct: 498 KLTYATLEQIESMNEDRSNESGPMWSRFFEGLPGAGGDDDT---ASIVSASERPDTPSRS 554
Query: 222 TIITENAKVAIVSP 235
+ ++ SP
Sbjct: 555 HLGHGRGLSSMTSP 568
>gi|321255198|ref|XP_003193342.1| hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
gi|317459812|gb|ADV21555.1| Hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
Length = 803
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 151/252 (59%), Gaps = 23/252 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG V+DA + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 181 TVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEG 240
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V++IMT+NP+ + A EALQ MV FRHLPV E+G+V+ +LDITK +
Sbjct: 241 LDPRSTNVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDITKVFH 300
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A++++E+ + + ++AA+ GV+ + G +A A++ETLRERM P L+T+I
Sbjct: 301 EALAKVERGSTATNQLSAALAGVQSELGPGLNHNPQAAAMLAYVETLRERMALPDLTTVI 360
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALI------------VTGS----KIQGILTS 268
+ V+P V AA+ M+E R+ + + V+G KI GI TS
Sbjct: 361 DTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTS 420
Query: 269 KDVLMRVVAQNL 280
KD+++RV+A L
Sbjct: 421 KDIVLRVIAAGL 432
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANA---------------LLSGIVTDKDITTRV 107
T+ T V +A R M RR AV + +ANA ++GI T KDI RV
Sbjct: 368 TVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVIPKIAGIFTSKDIVLRV 427
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDIT 166
IA GL + V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+
Sbjct: 428 IAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEADGRLIGIVDVL 487
Query: 167 KCLYDAISRME-----KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLS 221
K Y + ++E ++ E G + EG+ G + + A I + ER PS S
Sbjct: 488 KLTYATLEQIESMNEDRSDESGPMWSRFFEGLPGAGGDDDT---ASIVSASERPDTPSRS 544
Query: 222 TI 223
+
Sbjct: 545 HL 546
>gi|301118278|ref|XP_002906867.1| myosin-like protein [Phytophthora infestans T30-4]
gi|262108216|gb|EEY66268.1| myosin-like protein [Phytophthora infestans T30-4]
Length = 550
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 163/278 (58%), Gaps = 13/278 (4%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
R R P + S++ G +K S S R+VK++R S+AL +
Sbjct: 5 REKDARKPRPQQLVFSTKKAGRKTKTHQQHRSHSHS-------RSVKRMRPSRALLQGDH 57
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V+ R M R+ DA LL D N LL+GI+TD+D+ +V+A G P +T+ ++MT +P
Sbjct: 58 ATVAQCVRAMVERKTDAALLVDRNGLLTGILTDRDVAVKVVAVGRDPGRTLAHEVMTPDP 117
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSA-I 186
V+++S AI+AL+KM+ G+FRHLPV +N +V+ ILDI KCLY+AI+++E A + S +
Sbjct: 118 SCVSANSSAIDALKKMISGQFRHLPVTDNDKVVGILDIAKCLYEAITKLEHAYRESSDRL 177
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
V+ ++ + A E+LR+++F P+LS I+ E ++V ++ PS A+ A +M
Sbjct: 178 EETVKKLQDSLSGSTEA--NLFESLRQKLFLPTLSAILMEGSEVPVLGPS-STAMDAARM 234
Query: 247 REFRSNSALIVT--GSKIQGILTSKDVLMRVVAQNLSP 282
+ SA++V + GI TSKD++ RVVA +L P
Sbjct: 235 MLIQKTSAVMVCDEAGRTVGIFTSKDLMRRVVASSLEP 272
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA R M ++ AV++ D GI T KD+ RV+A L P+Q V+S +MT NP T
Sbjct: 230 DAARMMLIQKTSAVMVCDEAGRTVGIFTSKDLMRRVVASSLEPNQCVLSSVMTPNPQTAT 289
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENG-EVIAILDITKCLYDAISRM 176
+ +E L M GKF H+PV +NG +++ I+D+ + I +M
Sbjct: 290 LGTTILETLHSMHNGKFLHVPVFDNGTKLVGIVDVLQVTRGVIQQM 335
>gi|342320856|gb|EGU12794.1| Hypothetical Protein RTG_00812 [Rhodotorula glutinis ATCC 204091]
Length = 1571
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 23/292 (7%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S ++KR PS KR+ +S GG + P P+ + TV LR ALT+P
Sbjct: 880 SELARKRPPS--KRSGTS--GGTSHRAPKPK------------QGTVSALRPLPALTVPA 923
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
V+DA + A++R D VL+ D N L GI T KD+ RV+ +GL P T VS IMT N
Sbjct: 924 AMSVADASQLCAAKRTDCVLVVDENEHLCGIFTAKDLAFRVVGDGLDPRSTPVSAIMTPN 983
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
P+ + A EALQ MV FRHLPV E+G+V+ +LDITK ++++ ++EKA
Sbjct: 984 PMVTRDTTSATEALQTMVTRGFRHLPVCNEDGDVVGLLDITKVFHESLEKLEKAYGSSQR 1043
Query: 186 IAAAVEGVERQWG---SNFSAP-YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
+ +A+EG + Q+G + + P A+++ LR++M P L +I+ A V V
Sbjct: 1044 LYSALEGAQEQFGAVDTGAANPLLAYVQALRDKMSFPDLGSILDARTTAATVGVKTSVRE 1103
Query: 242 AAKKMREFRSNSALIVTGS--KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
AAK MRE R+ + ++V G KI GI TSKDV++RV+A L + V R +
Sbjct: 1104 AAKLMREKRTTAVVVVEGDGKKIAGIFTSKDVVLRVIAAGLDSKTCSVVRVM 1155
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANAL-LSGIVTDKDITTRVIAEGLRPDQTVV 119
A T+ T V +A + M +R AV++ + + ++GI T KD+ RVIA GL V
Sbjct: 1092 AATVGVKTSVREAAKLMREKRTTAVVVVEGDGKKIAGIFTSKDVVLRVIAAGLDSKTCSV 1151
Query: 120 SKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRME 177
++MT +P V SL+I +AL+KM G + +LPVV E G +I I+D+ K Y + ++
Sbjct: 1152 VRVMTPHPD-VALPSLSIQDALRKMNDGHYLNLPVVDEAGALIGIVDVLKLTYATLEQVN 1210
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFS 202
+G A AA WG FS
Sbjct: 1211 SLHVEGGADAAGGP----LWGRFFS 1231
>gi|348688916|gb|EGZ28730.1| hypothetical protein PHYSODRAFT_349233 [Phytophthora sojae]
Length = 546
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 171/283 (60%), Gaps = 13/283 (4%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
R + R P + S++ G +K + Q SS G R+VK++R S+AL +
Sbjct: 3 REKEARKPRQQQLVFSTKKAGRKAK--ARQQHSSH-----GHSRSVKRMRPSRALLQGDH 55
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V+ R M R+ DA LL D + LL+GI+TD+D+ +V+A G P +T+ ++MT +P
Sbjct: 56 ATVAQCVRAMVERKTDAALLVDRSGLLTGILTDRDVAVKVVAVGRDPTRTLAYEVMTPDP 115
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSA-I 186
V++++ AI+AL+KM+ G+FRHLPV +N +V+ ILDI KCLY+AI+++E A + S +
Sbjct: 116 SCVSANASAIDALKKMISGQFRHLPVTDNDKVVGILDIAKCLYEAIAKLEHAYRKSSDRL 175
Query: 187 AAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKM 246
V+ +++ + A E+LR+++F P+LS II E ++V ++SP+ A+ A +M
Sbjct: 176 EETVKKLQQSLSGSTEA--NLFESLRQKLFLPTLSAIIMEGSEVPVLSPT-STAMDAARM 232
Query: 247 REFRSNSALIVT--GSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ SA++V + GI T+KD++ RVVA +L P L+
Sbjct: 233 MLIQKTSAVMVCDEADRTVGIFTTKDLMRRVVALSLEPSQCLL 275
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA R M ++ AV++ D GI T KD+ RV+A L P Q ++S +MT P T
Sbjct: 228 DAARMMLIQKTSAVMVCDEADRTVGIFTTKDLMRRVVALSLEPSQCLLSGVMTPEPQTAT 287
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENG-EVIAILDITKCLYDAISRMEKAAEQGSAIAAAV 190
+ +E L M GKF H+PV ++G +++ I+D+ + + + +M G+ +
Sbjct: 288 LGTTILETLHSMHNGKFLHVPVFDSGKKLVGIVDVLQVTHGVVQQM------GTFQSVKN 341
Query: 191 EGVERQW 197
+GV+ W
Sbjct: 342 DGVQPLW 348
>gi|392597207|gb|EIW86529.1| CBS-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 656
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 147/252 (58%), Gaps = 12/252 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE V++A + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 59 TVAALKPSAALTVPETITVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEG 118
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS+IMTR P+ + A EALQ MVQ FRHLPV E G V+ +LDITK +
Sbjct: 119 LDPHATPVSQIMTRGPMVTRDSTSATEALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFH 178
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFS------APYAFIETLRERMFKPSLSTII 224
+A++++E+++ + +A+ GV+ + G N S A A++E LRE+ P L+TI+
Sbjct: 179 EALNKVERSSSASEKLYSALAGVQSELGPNMSTNPQAAAMLAYVEALREKTALPDLTTIM 238
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-----KIQGILTSKDVLMRVVAQN 279
A V+P V A+ M+E R+ + ++ KI GI TSKDV++RV+A
Sbjct: 239 DSRTHPATVTPKTTVREVARLMKERRTTAVCVMENHGGIHPKIAGIFTSKDVVLRVIAAG 298
Query: 280 LSPELTLVERFI 291
L + V R +
Sbjct: 299 LDANMCSVIRVM 310
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA----LLSGIVTDKDITTRV 107
T+ R A P+ T V + R M RR AV + + + ++GI T KD+ RV
Sbjct: 236 TIMDSRTHPATVTPK-TTVREVARLMKERRTTAVCVMENHGGIHPKIAGIFTSKDVVLRV 294
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDIT 166
IA GL + V ++MT +P + +AL+KM G + +LPVVE +G ++AI+D+
Sbjct: 295 IAAGLDANMCSVIRVMTPHPDTAPPTTTVHDALKKMHNGHYLNLPVVETDGRLVAIVDVL 354
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
K Y + +M + + A EG WG F +
Sbjct: 355 KLTYATLEQMNTMTTEAAGGNADAEGGP-MWGRFFDS 390
>gi|395334117|gb|EJF66493.1| CBS-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 717
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 145/244 (59%), Gaps = 15/244 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE VS+A + A++R D VL+ D + LSGI T KD+ RV AEG
Sbjct: 103 TVAALKPSPALTVPENITVSEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEG 162
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS IMTRNP+ + A EALQ MVQ FRHLPV E G V+ +LDITK +
Sbjct: 163 LDPHTTQVSVIMTRNPMVTRDTTSATEALQLMVQKHFRHLPVCNEEGNVVGLLDITKVFH 222
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF-SAPYA-----FIETLRERMFKPSLSTII 224
+A+ ++E+++ + +A+ GV+ + G+ S P A ++E LRE+ P L+T++
Sbjct: 223 EALDKVERSSSASEKLYSALAGVQSELGAGLGSNPQAAAMLSYVEALREKTALPDLTTVM 282
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--------TGSKIQGILTSKDVLMRVV 276
+ A V P V AK M+E R+ + ++ T +KI GI TSKD+++RV+
Sbjct: 283 DSRTQPATVGPKTTVREVAKLMKERRTTAVCVMEPAAPGHTTAAKIAGIFTSKDIVLRVI 342
Query: 277 AQNL 280
A L
Sbjct: 343 AAGL 346
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTD-------ANALLSGIVTDKDITTRVIAEGLRPD 115
T+ T V + + M RR AV + + A ++GI T KDI RVIA GL
Sbjct: 290 TVGPKTTVREVAKLMKERRTTAVCVMEPAAPGHTTAAKIAGIFTSKDIVLRVIAAGLDAT 349
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAIS 174
+ V ++MT +P +AL+KM G + +LPVVE +G ++AI+D+ K Y +
Sbjct: 350 RCSVVRVMTPHPDTAPPTMTIHDALKKMHIGHYLNLPVVEADGRLVAIVDVLKLTYATLE 409
Query: 175 RM 176
+M
Sbjct: 410 QM 411
>gi|392577363|gb|EIW70492.1| hypothetical protein TREMEDRAFT_29142 [Tremella mesenterica DSM
1558]
Length = 769
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 164/284 (57%), Gaps = 29/284 (10%)
Query: 37 QGESSSSVGGA--GGER----TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA 90
QG S+ GA GG++ TV LR S ALT+PE V+DA + A++R D VL+ D
Sbjct: 125 QGPSAPVSQGAKRGGKKPQKGTVAGLRPSPALTVPESMSVADASQLCAAKRTDCVLVVDE 184
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
LSGI T KD+ RV AEGL P T V++IMT+NP+ + A EALQ MV FRH
Sbjct: 185 EEGLSGIFTAKDLAFRVTAEGLDPRVTSVAQIMTKNPMVTRDTTSATEALQLMVSRGFRH 244
Query: 151 LPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP----- 204
LPV E+G+V +LDITK ++A++++E+ + S ++AA+ GV+ + G SA
Sbjct: 245 LPVCNEDGDVAGLLDITKVFHEALAKVERGSNATSQLSAALAGVQTELGPAISANPQAAA 304
Query: 205 -YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI------- 256
A+++ LRE+M +P L+T+I + VSP V AAK M+E R+ + +
Sbjct: 305 MMAYVDALREKMAQPDLTTVIDTSLPPPTVSPRTSVRDAAKLMKERRTTAVCVMETNLGT 364
Query: 257 --VTGS-------KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V+G+ +I GI TSKD+++RV+A L + V R +
Sbjct: 365 SAVSGASGQNGLPRIAGIFTSKDIVLRVIAAGLDAQRCSVVRVM 408
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 68 TIVSDACRRMASRRVDAVLLTDAN---------------ALLSGIVTDKDITTRVIAEGL 112
T V DA + M RR AV + + N ++GI T KDI RVIA GL
Sbjct: 338 TSVRDAAKLMKERRTTAVCVMETNLGTSAVSGASGQNGLPRIAGIFTSKDIVLRVIAAGL 397
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+ V ++MT +P + +AL+KM G + +LPVVE +G +I I+D+ K Y
Sbjct: 398 DAQRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVESDGRLIGIVDVLKLTY 456
>gi|358059825|dbj|GAA94471.1| hypothetical protein E5Q_01123 [Mixia osmundae IAM 14324]
Length = 676
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 160/293 (54%), Gaps = 17/293 (5%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
R S +RA S++ S NG G++ SS AG TV LR ALT+P
Sbjct: 61 RPSNRRAGSSNIPQPSQTNGNRRRG-----GQAGSSRRAAG---TVSALRPLPALTVPST 112
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V DA + A++R D VL+ D LSGI T KD+ RVI +GL P T VS IMT+NP
Sbjct: 113 MSVVDASQLCAAKRTDCVLVVDEEEHLSGIFTAKDLAFRVIGDGLDPRHTPVSAIMTKNP 172
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
+ + A +ALQ MV FRHLPV E G+V+ +LDITK ++++ ++E+A +
Sbjct: 173 MVTRDTTSATDALQTMVTRGFRHLPVCNEEGDVVGLLDITKVFHESLEKLERAYGSSQKL 232
Query: 187 AAAVEGVERQWG----SNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVA 242
A+EGV+ +WG S A++E LR++M P + +I+ + A + V A
Sbjct: 233 YTALEGVQSEWGPQGAQQASGLMAYVEALRDKMSFPDIGSILDVRTRAATIGVKTTVRDA 292
Query: 243 AKKMREFRSNSALIVTGS----KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
AK MRE R+ + ++ G K+ GI TSKDV++RV+A L + V R +
Sbjct: 293 AKIMRENRTTAVCVLEGDGSTGKLAGIFTSKDVVLRVIAAGLDAKTCSVVRVM 345
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIAEGLRPD 115
++A TI T V DA + M R AV + + + L+GI T KD+ RVIA GL
Sbjct: 278 TRAATIGVKTTVRDAAKIMRENRTTAVCVLEGDGSTGKLAGIFTSKDVVLRVIAAGLDAK 337
Query: 116 QTVVSKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
V ++MT +P S SL+I EAL+KM G + +LPV+++ G ++ +D+ K Y
Sbjct: 338 TCSVVRVMTPHPD-TASPSLSIQEALRKMHDGHYLNLPVLDDAGALVGCVDVLKLTY 393
>gi|328854683|gb|EGG03814.1| hypothetical protein MELLADRAFT_117255 [Melampsora larici-populina
98AG31]
Length = 720
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 156/285 (54%), Gaps = 33/285 (11%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKP-PSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
R QKR P+ G L P P P+ ++ TV LR ALT+P+
Sbjct: 66 RPGQKRGPT-----------GGLGHPGPRPRRQAG----------TVSALRPLPALTVPD 104
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
V+DA + A++R D VL+ D + L GI T KD+ RVI +GL P T+VS+IMT+N
Sbjct: 105 NITVADASQLCAAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGLDPRSTLVSEIMTKN 164
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
P+ + A EAL MV FRHLPV E G+VI +LDITK ++++ ++E+A
Sbjct: 165 PMVTRDTTSATEALTTMVTRGFRHLPVCNEEGDVIGLLDITKVFHESLEKLERAYGSSQK 224
Query: 186 IAAAVEGVERQWGSNFSAPY--------AFIETLRERMFKPSLSTIITENAKVAIVSPSD 237
+ A+EGV+ ++G + +A + A++E LR++M P L +I+ A V
Sbjct: 225 LYNAIEGVQSEFGGSSNATHINQPNPLMAYVEALRDKMSFPDLGSILDARTTAATVGVKT 284
Query: 238 PVAVAAKKMREFRSNSALIV--TGSKIQGILTSKDVLMRVVAQNL 280
V AAK MR+ + + ++ G KI GI TSKDV++RV+A L
Sbjct: 285 SVKEAAKLMRDHHTTAVCVMENDGKKIAGIFTSKDVVLRVIAAGL 329
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANAL-LSGIVTDKDITTRVIAEGLRPDQTVV 119
A T+ T V +A + M AV + + + ++GI T KD+ RVIA GL V
Sbjct: 277 AATVGVKTSVKEAAKLMRDHHTTAVCVMENDGKKIAGIFTSKDVVLRVIAAGLDARTCSV 336
Query: 120 SKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRME 177
++MT +P SL+I EAL+KM G + +LPVV E G++ +D+ K Y + ++
Sbjct: 337 VRVMTPHPDTALP-SLSIQEALRKMHDGHYLNLPVVDEAGQLQGCVDVLKLTYATLEQVN 395
Query: 178 KAAEQG 183
+ G
Sbjct: 396 SISADG 401
>gi|390604204|gb|EIN13595.1| CBS-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 665
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 144/245 (58%), Gaps = 16/245 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE VS+A + A++R D VL+ D + LSGI T KD+ RV AEG
Sbjct: 57 TVAALKPSPALTVPENITVSEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEG 116
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS+IMTRNP+ + A EALQ MVQ FRHLPV E G V+ +LDITK +
Sbjct: 117 LDPHITPVSQIMTRNPMVTRDTTSATEALQLMVQKHFRHLPVCNEEGNVVGLLDITKVFH 176
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP------YAFIETLRERMFKPSLSTII 224
+A+ ++E+++ + +A+ GV+ + G +A A++E+LRE+ P L+T++
Sbjct: 177 EALDKVERSSSASEKLYSALAGVQSELGPGVTANPQTAAMLAYVESLREKTALPDLTTVM 236
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS---------KIQGILTSKDVLMRV 275
+ A V P V AK M+E R + ++ S +I GI TSKDV++RV
Sbjct: 237 DSRTQPATVGPRTTVKEVAKLMKERRVTAVCVMESSTGQGATSPQRIAGIFTSKDVVLRV 296
Query: 276 VAQNL 280
+A L
Sbjct: 297 IAAGL 301
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANA--------LLSGIVTDKDITTRVIAEGLRPDQTVV 119
T V + + M RRV AV + +++ ++GI T KD+ RVIA GL + V
Sbjct: 249 TTVKEVAKLMKERRVTAVCVMESSTGQGATSPQRIAGIFTSKDVVLRVIAAGLEAARCSV 308
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEK 178
++MT +P +AL+KM G + +LPVVE +G ++AI+D+ K Y + +M +
Sbjct: 309 VRVMTPHPDTAPPTMSVHDALKKMHNGHYLNLPVVETDGRLVAIVDVLKLTYATLEQMNQ 368
Query: 179 AAEQGSAIAAAVEGVERQWGSNFSA 203
+ + + G WG F +
Sbjct: 369 MTSEAAGESENQGG--PMWGRFFES 391
>gi|389751715|gb|EIM92788.1| CBS-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 668
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 155/276 (56%), Gaps = 18/276 (6%)
Query: 19 KRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMA 78
KRT S+ N S PP G A G TV L+ S ALT+PE V++A + A
Sbjct: 36 KRTISTTY--NNSLPPPAGGRRRGKPSAAKG--TVAALKPSPALTVPETITVAEASQLCA 91
Query: 79 SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE 138
++R D VL+ D LSGI T KD+ R+ AEG+ P T VS++MTRNP+ + A E
Sbjct: 92 AKRTDCVLVVDEEEGLSGIFTAKDLAYRITAEGVDPHVTAVSQVMTRNPMVTRDTTSATE 151
Query: 139 ALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW 197
ALQ MV FRHLPV E G V+ +LDITK +DA+ ++E+++ + +A+ GV+ +
Sbjct: 152 ALQLMVTRNFRHLPVCNEEGNVVGLLDITKVFHDALDKVERSSSASEKLYSALAGVQTEL 211
Query: 198 GSNF------SAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRS 251
G +A A+++ LRE+ P L+T++ + A V P V AK M+E R+
Sbjct: 212 GGGIATNPQAAAMLAYVDALREKTALPDLTTVMDSRTQPATVGPKTTVKEVAKLMKERRT 271
Query: 252 NSALIVTGS-------KIQGILTSKDVLMRVVAQNL 280
+ ++ G+ ++ GI TSKDV++RV+A L
Sbjct: 272 TAVCVMEGTTGINNVPRVAGIFTSKDVVLRVIAAGL 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA------LLSGIVTDKDITT 105
TV R A P+ T V + + M RR AV + + ++GI T KD+
Sbjct: 242 TVMDSRTQPATVGPK-TTVKEVAKLMKERRTTAVCVMEGTTGINNVPRVAGIFTSKDVVL 300
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILD 164
RVIA GL + V ++MT +P +AL+KM G + +LPV+E +G ++AI+D
Sbjct: 301 RVIAAGLDASRCSVVRVMTPHPDTAPPTMFVHDALKKMHNGHYLNLPVLEADGRLVAIVD 360
Query: 165 ITKCLYDAISRMEK-AAEQGSAIAAAVEGVERQWGSNFSA 203
+ K Y + +M AE A EG WG F +
Sbjct: 361 VLKLTYATLEQMNTMTAESAGETAGETEG-GPMWGRFFDS 399
>gi|392571726|gb|EIW64898.1| CBS-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 698
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 143/244 (58%), Gaps = 15/244 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE VS+A + A++R D VL+ D + LSGI T KD+ RV AEG
Sbjct: 80 TVAALKPSPALTVPENITVSEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVSAEG 139
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS IMTRNP+ + A EALQ MV FRHLPV E G V+ +LDITK +
Sbjct: 140 LDPHITPVSTIMTRNPMVTRDTTSATEALQLMVTKHFRHLPVCNEEGNVVGLLDITKVFH 199
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA-PYA-----FIETLRERMFKPSLSTII 224
+A+ ++E+++ + +A+ GV+ + GS A P A ++E LRE+ P L+TI+
Sbjct: 200 EALDKVERSSSASEKLYSALAGVQSELGSGLGANPQAAAMLSYVEALREKTALPDLTTIM 259
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVT--------GSKIQGILTSKDVLMRVV 276
+ A V P V AK M+E R+ + ++ +KI GI TSKD+++RV+
Sbjct: 260 DSRTQPATVGPKTTVREVAKLMKERRTTAVCVMEPAAPGQPGAAKIAGIFTSKDIVLRVI 319
Query: 277 AQNL 280
A L
Sbjct: 320 AAGL 323
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTD-------ANALLSGIVTDKDITTRVIAEGLRPD 115
T+ T V + + M RR AV + + A ++GI T KDI RVIA GL
Sbjct: 267 TVGPKTTVREVAKLMKERRTTAVCVMEPAAPGQPGAAKIAGIFTSKDIVLRVIAAGLDAT 326
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAIS 174
+ V ++MT +P +AL+KM G + +LPVVE +G ++AI+D+ K Y +
Sbjct: 327 RCSVVRVMTPHPDTAPPTLTIHDALKKMHNGHYLNLPVVEADGRLVAIVDVLKLTYATLE 386
Query: 175 RMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
+M + + A A G WG F +
Sbjct: 387 QMNAMSTEAPGEAEAEGG--PMWGRFFDS 413
>gi|380494191|emb|CCF33335.1| hypothetical protein CH063_05547 [Colletotrichum higginsianum]
Length = 707
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 149/244 (61%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 125 TVLALKPSQALQIKPGTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 184
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+P+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 185 QKPNHITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 244
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++ +
Sbjct: 245 DAMEKLERAYSSSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVL-DG 301
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P V
Sbjct: 302 RPPTTVSVRTSVKEAAQMMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 361
Query: 288 ERFI 291
R +
Sbjct: 362 VRVM 365
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 311 TSVKEAAQMMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 369
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M + +G
Sbjct: 370 DFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMSTSDSEG 429
Query: 184 SA 185
A
Sbjct: 430 PA 431
>gi|302418246|ref|XP_003006954.1| CBS/PB1 domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261354556|gb|EEY16984.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 750
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 147/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I GT V++A + MA++R D VL+TD + +SGI T KD+ RV+ G
Sbjct: 167 TVLALKPSPALQIKPGTTVAEAAQLMAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAG 226
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++P +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 227 MKPTHITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 286
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 287 DAMEKLERAYSSSRRLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLNGT 344
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P V
Sbjct: 345 PPTT-VSVRTSVREAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAVGLDPATCSV 403
Query: 288 ERFI 291
R +
Sbjct: 404 VRVM 407
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 353 TSVREAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAVGLDPATCSVVRVMTPHP 411
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F + D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 412 DFASMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMATGDNEG 471
Query: 184 SA 185
A
Sbjct: 472 PA 473
>gi|426201879|gb|EKV51802.1| hypothetical protein AGABI2DRAFT_190012 [Agaricus bisporus var.
bisporus H97]
Length = 698
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 155/277 (55%), Gaps = 22/277 (7%)
Query: 10 SQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTI 69
S+KR ST+ ++ S+ GG + + TV L+ + ALT+PE
Sbjct: 81 SRKRTISTTFQSGRSKRGGKTT----------------AAKGTVAALKPTPALTVPENIS 124
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V++A + A++R D VL+ D LSGI T KD+ RV AE L P T V++IMTRNP+
Sbjct: 125 VAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAESLDPHTTPVNQIMTRNPMV 184
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ A EALQ MV FRHLPV E+G V+ +LDITK ++A+ ++E+++ +
Sbjct: 185 TRDTTSATEALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALDKVERSSAASEQLFN 244
Query: 189 AVEGVERQWGSNFSAP-----YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAA 243
A+ GV+ + G+ S P A+ E LR++ P L+TI+ A V P V A
Sbjct: 245 AMAGVQTELGAVGSNPQATAMLAWAEKLRQKTALPDLTTIMDSRTDPATVGPKTNVREVA 304
Query: 244 KKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
K M+E R+ + ++ G +I GI TSKDV++RV+A L
Sbjct: 305 KLMKERRTTAVCVIEGGRIVGIFTSKDVVLRVIAAGL 341
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ T V + + M RR AV + + ++ GI T KD+ RVIA GL ++ V ++
Sbjct: 293 TVGPKTNVREVAKLMKERRTTAVCVIEGGRIV-GIFTSKDVVLRVIAAGLDANRCSVIRV 351
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAE 181
MT +P +AL+KM G + +LPVV E+G ++A++D+ K Y + +M A
Sbjct: 352 MTPHPDTAPPTMTVHDALKKMHIGHYLNLPVVEEDGSLVAVVDVLKLTYATLEQMNVMA- 410
Query: 182 QGSAIAAAVEGVERQWGSNFSA 203
G A EG WG F +
Sbjct: 411 -GGEAGADNEGGP-MWGRFFDS 430
>gi|409083070|gb|EKM83427.1| hypothetical protein AGABI1DRAFT_81204 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 652
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 156/280 (55%), Gaps = 22/280 (7%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S S+KR ST+ ++ S+ GG + + TV L+ + ALT+PE
Sbjct: 33 SDLSRKRTISTTFQSGRSKRGGKTT----------------AAKGTVAALKPTPALTVPE 76
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
V++A + A++R D VL+ D LSGI T KD+ RV AE L P T V++IMTRN
Sbjct: 77 NISVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAESLDPHTTPVNQIMTRN 136
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
P+ + A EALQ MV FRHLPV E+G V+ +LDITK ++A+ ++E+++
Sbjct: 137 PMVTRDTTSATEALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFHEALDKVERSSAASEQ 196
Query: 186 IAAAVEGVERQWGSNFSAP-----YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVA 240
+ A+ GV+ + G+ S P A+ E LR++ P L+TI+ A V P V
Sbjct: 197 LFNAMAGVQTELGAVGSNPQATAMLAWAEKLRQKTALPDLTTIMDSRTDPATVGPKTNVR 256
Query: 241 VAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
AK M+E R+ + ++ G +I GI TSKDV++RV+A L
Sbjct: 257 EVAKLMKERRTTAVCVIEGGRIVGIFTSKDVVLRVIAAGL 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ T V + + M RR AV + + ++ GI T KD+ RVIA GL ++ V ++
Sbjct: 248 TVGPKTNVREVAKLMKERRTTAVCVIEGGRIV-GIFTSKDVVLRVIAAGLDANRCSVIRV 306
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAE 181
MT +P +AL+KM G + +LPVV E+G ++A++D+ K Y + E
Sbjct: 307 MTPHPDTAPPTMTVHDALKKMHIGHYLNLPVVEEDGSLVAVVDVLKLTYATL-------E 359
Query: 182 QGSAIAAAVEGVERQ----WGSNFSA 203
Q + +A GV+ + WG F +
Sbjct: 360 QMNVMAGGEAGVDNEGGPMWGRFFDS 385
>gi|346979111|gb|EGY22563.1| CBS domain-containing protein [Verticillium dahliae VdLs.17]
Length = 714
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I GT V++A + MA++R D VL+TD + +SGI T KD+ RV+ G
Sbjct: 131 TVLALKPSPALQIKPGTTVAEAAQLMAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAG 190
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++P ++ IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 191 MKPTHITIADIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 250
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 251 DAMEKLERAYSSSRRLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLNGT 308
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P V
Sbjct: 309 PPTT-VSVRTSVREAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAVGLDPATCSV 367
Query: 288 ERFI 291
R +
Sbjct: 368 VRVM 371
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 317 TSVREAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAVGLDPATCSVVRVMTPHP 375
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F + D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 376 DFASMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMATGDNEG 435
Query: 184 SA 185
A
Sbjct: 436 PA 437
>gi|403415486|emb|CCM02186.1| predicted protein [Fibroporia radiculosa]
Length = 663
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 35/293 (11%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S S+KR ST++ T S G KP +G TV L+ S ALT+PE
Sbjct: 28 SELSRKRTISTTQHTPSRRRG---HKPNVQKG-------------TVAALKPSPALTVPE 71
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
V++A + A++R D VL+ D + LSGI T KD+ RV A+GL P T VS IMTR+
Sbjct: 72 NITVAEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTADGLDPHTTPVSTIMTRS 131
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
P+ + A EALQ MVQ FRHLPV E G V+ +LDITK ++A+ ++E+++
Sbjct: 132 PMVTRDTTSATEALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFHEALDKVERSSSASEK 191
Query: 186 IAAAVEGVERQWGSNFSA-PYA-----FIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
+ +A+ GV+ + G+ A P A ++E LRE+ P L+T++ + A VSP V
Sbjct: 192 LYSALAGVQSELGTGMGANPQAAAMLSYVEALREKTALPDLTTVMDSRTQPATVSPKTTV 251
Query: 240 AVAAKKMREFRSNSALIVTG------------SKIQGILTSKDVLMRVVAQNL 280
AK M+E R+ + ++ +I GI TSKD+++RV+A L
Sbjct: 252 REVAKLMKERRTTAVCVMENISHPPGTVGAELPRIAGIFTSKDIVLRVIAAGL 304
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANAL-----------LSGIVTDKDITTRVIAEG 111
T+ T V + + M RR AV + + + ++GI T KDI RVIA G
Sbjct: 244 TVSPKTTVREVAKLMKERRTTAVCVMENISHPPGTVGAELPRIAGIFTSKDIVLRVIAAG 303
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
L + V ++MT +P +AL+KM G + +LPVVE +G ++AI+D+ K Y
Sbjct: 304 LDATRCSVVRVMTPHPDTAPPTMTCHDALKKMHNGHYLNLPVVETDGRLVAIVDVLKLTY 363
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
+ +M + +A A EG WG F +
Sbjct: 364 ATLEQMNTITAE-NADANEAEGGP-MWGRFFES 394
>gi|384499555|gb|EIE90046.1| hypothetical protein RO3G_14757 [Rhizopus delemar RA 99-880]
Length = 550
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 130/208 (62%), Gaps = 2/208 (0%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA++R D VL+ D LSGI T KD+ RV+A+ L VS IMTRNP+ VT+D+ A
Sbjct: 1 MAAKRSDCVLVVDEEEHLSGIFTAKDLAYRVVADNLDARAITVSDIMTRNPMCVTADTSA 60
Query: 137 IEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVER 195
+AL MV FRHLPV E G++ +LDITKC+Y+A+ +MEKA + A+EGVER
Sbjct: 61 QDALNLMVSRGFRHLPVCNEEGDIFGLLDITKCIYEALHKMEKAYSSSRKLYDALEGVER 120
Query: 196 QWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSAL 255
+W ++ ++E L+++M P L+T++ V + + V AK M+E+ + + L
Sbjct: 121 EWANSPVQLVQYMEALKDKMSCPDLTTVLDHAGPVQVTMKAQ-VREVAKLMKEYHTTAVL 179
Query: 256 IVTGSKIQGILTSKDVLMRVVAQNLSPE 283
++ + GI TSKD+++RV+A L+P+
Sbjct: 180 VMDHGGLAGIFTSKDIVLRVIAAGLAPD 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V + + M AVL+ D L +GI T KDI RVIA GL PD V ++MT +P
Sbjct: 163 VREVAKLMKEYHTTAVLVMDHGGL-AGIFTSKDIVLRVIAAGLAPDSCSVVRVMTPHPDT 221
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQGSA 185
+ ++AL+KM G + +LPV+ E+ ++ ++D+ + Y + I+ +E GS
Sbjct: 222 ALPSTSILDALKKMHDGHYLNLPVLDEDKNIVGLIDVLRLTYATLEQINSIEGNQGDGSK 281
Query: 186 IAAAVEG 192
++ G
Sbjct: 282 FWHSIAG 288
>gi|429850172|gb|ELA25470.1| cbs and pb1 domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 520
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 148/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 197 TVLALKPSPALQIKPATTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 256
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+P+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 257 QKPNHITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 316
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++ +
Sbjct: 317 DAMEKLERAYSSSRRLYDALEGVQSELGT--SQPQQIIQYVEALRHKMSGPTLESVL-DG 373
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA++M+E R+ + L+ I GI TSKDV++RV+A L P V
Sbjct: 374 RPPTTVSVRTSVKEAAQQMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 433
Query: 288 ERFI 291
R +
Sbjct: 434 VRVM 437
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A ++M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 383 TSVKEAAQQMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 441
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M A +
Sbjct: 442 DFAPMDMSIQAALRKMHDGHYLNLPVMTSDGGEIVGMVDVLKLTYATLEQINTMSTADSE 501
Query: 183 GSA 185
G A
Sbjct: 502 GPA 504
>gi|170086117|ref|XP_001874282.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651834|gb|EDR16074.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 700
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 143/247 (57%), Gaps = 18/247 (7%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE V++A + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 84 TVAALKPSPALTVPENITVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEG 143
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS+IMTRNP+ + A EALQ MV FRHLPV E+G V+ +LDITK +
Sbjct: 144 LDPHTTPVSQIMTRNPMVTRDSTSATEALQLMVSRHFRHLPVCNEDGNVVGLLDITKVFH 203
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGS------NFSAPYAFIETLRERMFKPSLSTII 224
+A+ ++E+++ + +A+ GV+ + G +A A+ E LRE+ P L+T++
Sbjct: 204 EALGKVERSSAASEQLFSAMAGVQSELGGAVGSNPQAAAMLAWAEKLREKTALPDLTTVM 263
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-----------TGSKIQGILTSKDVLM 273
+ A V P V AK M+E R+ + ++ GS+I GI TSKDV++
Sbjct: 264 DSRTQPATVGPKTTVREVAKLMKERRTTAVCVMETAGPASPGLPAGSRIAGIFTSKDVVL 323
Query: 274 RVVAQNL 280
RV+A L
Sbjct: 324 RVIAAGL 330
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD----------ANALLSGIVTDK 101
TV R A P+ T V + + M RR AV + + A + ++GI T K
Sbjct: 261 TVMDSRTQPATVGPK-TTVREVAKLMKERRTTAVCVMETAGPASPGLPAGSRIAGIFTSK 319
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVI 160
D+ RVIA GL + V ++MT +P +AL+KM G + +LPV+ E+G ++
Sbjct: 320 DVVLRVIAAGLDAGRCSVVRVMTPHPDTAPPTMSVHDALKKMHNGHYLNLPVIEEDGRLV 379
Query: 161 AILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
AI+D+ K Y + +M A G + EG WG F +
Sbjct: 380 AIVDVLKLTYATLEQMNAMA-GGDTTSTEAEGGP-MWGRFFDS 420
>gi|361127748|gb|EHK99707.1| putative Meiotically up-regulated gene 70 protein [Glarea
lozoyensis 74030]
Length = 698
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 144/235 (61%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 98 TVLALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 157
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ ++S+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 158 IKASNVMISEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 217
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L +++
Sbjct: 218 DAMEKLERAYSSSRKLYDALEGVQSELGS--TQPQQIIQYVEALRSKMSGPTLESVLDGR 275
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
V VS V AA KM+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 276 PPVT-VSVRTSVKEAAAKMKENHTTAVLVQDQDSITGIFTSKDVVLRVIAPGLDP 329
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A +M AVL+ D +++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 284 TSVKEAAAKMKENHTTAVLVQDQDSI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 342
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M +G
Sbjct: 343 DFAPMDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINTMSTGDSEG 402
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIETLRER-MFKPSLS 221
A +E + S S + T R + P LS
Sbjct: 403 PAWGKFWMALENETESIMSGEGSHHHTTGGRSLMSPDLS 441
>gi|350630805|gb|EHA19177.1| hypothetical protein ASPNIDRAFT_54229 [Aspergillus niger ATCC 1015]
Length = 672
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 100 TVLALKPSQALQIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTG 159
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 160 LKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 219
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 220 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRHKMSGPTLETVL-DG 276
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA MRE + + L+ I GI TSKD+++RV+A L P V
Sbjct: 277 MPPTTVSVRTTVKDAAALMREHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 336
Query: 288 ERFI 291
R +
Sbjct: 337 VRVM 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 286 TTVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 344
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
F SD AL+KM G + +LPV+ + GE++ ++D+ K Y
Sbjct: 345 DFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTY 388
>gi|317037370|ref|XP_001399033.2| CBS/PB1 domain-containing protein [Aspergillus niger CBS 513.88]
Length = 662
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 100 TVLALKPSQALQIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTG 159
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 160 LKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 219
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 220 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRHKMSGPTLETVL-DG 276
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA MRE + + L+ I GI TSKD+++RV+A L P V
Sbjct: 277 MPPTTVSVRTTVKDAAALMREHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 336
Query: 288 ERFI 291
R +
Sbjct: 337 VRVM 340
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 286 TTVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 344
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 345 DFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQINTMQSHDDEG 404
Query: 184 SA 185
A
Sbjct: 405 PA 406
>gi|452838321|gb|EME40262.1| hypothetical protein DOTSEDRAFT_74911 [Dothistroma septosporum
NZE10]
Length = 665
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 148/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR ++AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 86 TVLALRPNQALQIRPNTTVTEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 145
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 146 LKANSVTIAEIMTKNPLCANTDTSATDALDLMVRKGFRHLPVMDENHDISGVLDITKCFY 205
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R+RM P+L +++
Sbjct: 206 DAMEKLERAYTSSKKLYDALEGVQAELGS--SQPQQIIQYVEAVRQRMSGPTLESVLN-G 262
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ +I GI TSKDV++RV+A L P V
Sbjct: 263 LPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGQITGIFTSKDVVLRVIAAGLDPSTCSV 322
Query: 288 ERFI 291
R +
Sbjct: 323 IRVM 326
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 272 TSVKEAAQLMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAAGLDPSTCSVIRVMTPHP 330
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D +AL+KM G + +LPV+ E+ E++ ++D+ K Y D I+ M + +
Sbjct: 331 DFAPLDMSIQQALRKMHDGHYLNLPVMNKESDEIVGMVDVLKLTYATLDQINGMSTSDNE 390
Query: 183 GSA 185
G A
Sbjct: 391 GPA 393
>gi|242766797|ref|XP_002341242.1| CBS/PB1 domain-containing protein [Talaromyces stipitatus ATCC
10500]
gi|218724438|gb|EED23855.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 674
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 96 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 155
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 156 LKAREVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 215
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++ +
Sbjct: 216 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVL-DG 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 273 MPPTTVSVRTSVKEAAALMKEHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 332
Query: 288 ERFI 291
R +
Sbjct: 333 VRVM 336
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 282 TSVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 340
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 341 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINSMNTGDDEG 400
Query: 184 SA 185
A
Sbjct: 401 PA 402
>gi|310791950|gb|EFQ27477.1| hypothetical protein GLRG_01972 [Glomerella graminicola M1.001]
Length = 682
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 148/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 100 TVLALKPSQALQIKPGTSVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 159
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+P +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 160 QKPSHITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 219
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++ +
Sbjct: 220 DAMEKLERAYSSSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVL-DG 276
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M++ R+ + L+ I GI TSKDV++RV+A L P V
Sbjct: 277 RPPTTVSVRTSVREAAQMMKDNRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 336
Query: 288 ERFI 291
R +
Sbjct: 337 VRVM 340
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 286 TSVREAAQMMKDNRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 344
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M + +G
Sbjct: 345 DFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMSTSDSEG 404
Query: 184 SA 185
A
Sbjct: 405 PA 406
>gi|134084625|emb|CAK97501.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 47 TVLALKPSQALQIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTG 106
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 107 LKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 166
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 167 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRHKMSGPTLETVL-DG 223
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA MRE + + L+ I GI TSKD+++RV+A L P V
Sbjct: 224 MPPTTVSVRTTVKDAAALMREHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 283
Query: 288 ERFI 291
R +
Sbjct: 284 VRVM 287
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 233 TTVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 291
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 292 DFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQINTMQSHDDEG 351
Query: 184 SA 185
A
Sbjct: 352 PA 353
>gi|358373443|dbj|GAA90041.1| CBS and PB1 domain protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 47 TVLALKPSQALQIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTG 106
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 107 LKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 166
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 167 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRHKMSGPTLETVL-DG 223
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA MRE + + L+ I GI TSKD+++RV+A L P V
Sbjct: 224 MPPTTVSVRTTVKDAAALMREHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 283
Query: 288 ERFI 291
R +
Sbjct: 284 VRVM 287
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 233 TTVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 291
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 292 DFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQINTMQSHDDEG 351
Query: 184 SA 185
A
Sbjct: 352 PA 353
>gi|299755073|ref|XP_001828409.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298411057|gb|EAU93401.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 719
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 14/259 (5%)
Query: 36 PQGESSSSVG-GAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALL 94
PQ S S G A + TV L+ S ALT+PE V++A + A++R D VL+ D L
Sbjct: 102 PQPPSRSRRGKNAPTKGTVAALKPSPALTVPENITVAEASQLCAAKRTDCVLVVDEEEGL 161
Query: 95 SGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
SGI T KD+ RV AEGL P T V++IMTRNP+ + A EALQ MV FRHLPV
Sbjct: 162 SGIFTAKDLAYRVTAEGLDPHSTPVAQIMTRNPMVTRDTTSATEALQLMVSRHFRHLPVC 221
Query: 155 -ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-----YAFI 208
E+G V+ +LDITK ++A+ ++E+++ + A+ GV+ + G S P A+
Sbjct: 222 NEDGNVVGLLDITKVFHEALGKVERSSAASEQLFNAMAGVQSELGGVGSNPQAAAMLAWA 281
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-------TGSK 261
E LRE+ P L+T++ A V P V AK M+E R+ + ++ +
Sbjct: 282 EKLREKTALPDLTTVMDSRTHPATVGPKTTVRDVAKLMKERRTTAVCVMEPPGPGTPHPR 341
Query: 262 IQGILTSKDVLMRVVAQNL 280
I GI TSKDV++RV+A L
Sbjct: 342 IAGIFTSKDVVLRVIAAGL 360
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA------NALLSGIVTDKDITT 105
TV R A P+ T V D + M RR AV + + + ++GI T KD+
Sbjct: 295 TVMDSRTHPATVGPK-TTVRDVAKLMKERRTTAVCVMEPPGPGTPHPRIAGIFTSKDVVL 353
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILD 164
RVIA GL + V ++MT +P +AL+KM G + +LPVV E+G ++AI+D
Sbjct: 354 RVIAAGLDAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVVEEDGRLVAIVD 413
Query: 165 ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
+ K Y + +M A G A A+ EG WG F +
Sbjct: 414 VLKLTYATLEQMN--AMSGEAAASDNEGGP-MWGRFFDS 449
>gi|119187931|ref|XP_001244572.1| CBS/PB1 domain-containing protein [Coccidioides immitis RS]
gi|392871287|gb|EAS33178.2| CBS and PB1 domain-containing protein [Coccidioides immitis RS]
Length = 655
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 89 TVLALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 148
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 149 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 208
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++
Sbjct: 209 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVLNGL 266
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V AA MRE + + L+ I GI TSKDV++RV+A L P V
Sbjct: 267 PPIT-VSVRTSVKDAAALMREHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 325
Query: 288 ERFI 291
R +
Sbjct: 326 VRVM 329
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T V DA M A+L+ D ++ +GI T KD+ RVIA GL P V +
Sbjct: 269 ITVSVRTSVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVR 327
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRME 177
+MT +P F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + I+ M+
Sbjct: 328 VMTPHPDFAPTDMSIQAALRKMHYGHYLNLPVMNESGEIVGMVDVLKLTYATLEQINTMQ 387
Query: 178 KAAEQGSA 185
+G A
Sbjct: 388 TNENEGPA 395
>gi|320038151|gb|EFW20087.1| CBS and PB1 domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 655
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 89 TVLALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 148
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 149 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 208
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++
Sbjct: 209 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVLNGL 266
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V AA MRE + + L+ I GI TSKDV++RV+A L P V
Sbjct: 267 PPIT-VSVRTSVKDAAALMREHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 325
Query: 288 ERFI 291
R +
Sbjct: 326 VRVM 329
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T V DA M A+L+ D ++ +GI T KD+ RVIA GL P V +
Sbjct: 269 ITVSVRTSVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVR 327
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRME 177
+MT +P F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + I+ M+
Sbjct: 328 VMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQINTMQ 387
Query: 178 KAAEQGSA 185
+G A
Sbjct: 388 TNENEGPA 395
>gi|212528298|ref|XP_002144306.1| CBS/PB1 domain-containing protein [Talaromyces marneffei ATCC
18224]
gi|210073704|gb|EEA27791.1| CBS and PB1 domain protein [Talaromyces marneffei ATCC 18224]
Length = 675
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 97 TVLALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 156
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 157 LKAREVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 216
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++ +
Sbjct: 217 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVL-DG 273
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 274 MPPTTVSVRTSVKEAAALMKEHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 333
Query: 288 ERFI 291
R +
Sbjct: 334 VRVM 337
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 283 TSVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 341
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 342 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINSMNTGDDEG 401
Query: 184 SA 185
A
Sbjct: 402 PA 403
>gi|225680402|gb|EEH18686.1| CBS and PB1 domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 676
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 143/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVMALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L T++
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLN-GLP 271
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V R
Sbjct: 272 PTTVSVRTSVREAAALMKENHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVR 331
Query: 290 FI 291
+
Sbjct: 332 VM 333
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KDI RVIA GL P+ V ++MT +P
Sbjct: 279 TSVREAAALMKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKM------------VQGKFRHLPVV-ENGEVIAILDITKCLY 170
F +D AL+KM + G + +LPV+ E GE++ ++D+ K Y
Sbjct: 338 DFAPTDMSIQAALRKMHGAEETGLTISKLDGHYLNLPVMNEAGEIVGMVDVLKLTY 393
>gi|303316684|ref|XP_003068344.1| CBS/PB1 domain-containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108025|gb|EER26199.1| CBS domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 655
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 89 TVLALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 148
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 149 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 208
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++
Sbjct: 209 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVLNGL 266
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V AA MRE + + L+ I GI TSKDV++RV+A L P V
Sbjct: 267 PPIT-VSVRTSVKDAAALMREHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 325
Query: 288 ERFI 291
R +
Sbjct: 326 VRVM 329
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T V DA M A+L+ D ++ +GI T KD+ RVIA GL P V +
Sbjct: 269 ITVSVRTSVKDAAALMREHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVR 327
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRME 177
+MT +P F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + I+ M+
Sbjct: 328 VMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQINTMQ 387
Query: 178 KAAEQGSA 185
+G A
Sbjct: 388 TNENEGPA 395
>gi|449304257|gb|EMD00265.1| hypothetical protein BAUCODRAFT_30741 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 145/235 (61%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ ++AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 87 TVLALKPNQALQIKPNTTVTEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 146
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 147 LKANNVTIAEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 206
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R+RM P+L +++
Sbjct: 207 DAMEKLERAYSSSKKLYDALEGVQAELGS--SQPQQIIQYVEAVRQRMSGPTLESVLN-G 263
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA+ M+E + + L+ +I GI TSKDV++RV+A L P
Sbjct: 264 LPPTTVSVRTSVREAAQLMKENHTTAVLVQDQGQITGIFTSKDVVLRVIAAGLDP 318
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 273 TSVREAAQLMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAAGLDPANCSVVRVMTPHP 331
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D +AL+KM G + +LPV+ EN E++ ++D+ K Y D I+ M +
Sbjct: 332 DFAPLDMSIQQALRKMHDGHYLNLPVMNKENDEIVGMVDVLKLTYATLDQINSMSTGDSE 391
Query: 183 GSA 185
G A
Sbjct: 392 GPA 394
>gi|346327044|gb|EGX96640.1| mitochondrial ribosomal protein subunit S4 [Cordyceps militaris
CM01]
Length = 687
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 140/233 (60%), Gaps = 3/233 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 111 TVMALKPSQALQIKPGTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 170
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 171 LKSSSVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 230
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV + G+N ++E LR +M P+L T++
Sbjct: 231 DAMEKLERAYSSSRKLYDALEGVHSELGTNQPQQIIQYVEALRSKMSGPTLETVLN-GIP 289
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 290 PTTVSVRTSVREAAALMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 342
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 297 TSVREAAALMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPTNCSVVRVMTPHP 355
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ ++GE++ ++D+ K Y + I+ M +G
Sbjct: 356 DFAPMDMTIQAALRKMHDGHYLNLPVMNDSGEIVGMVDVLKLTYATLEQINSMSTGDGEG 415
Query: 184 SA 185
A
Sbjct: 416 PA 417
>gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
Length = 1086
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 147/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 98 TVLALKPSQALQIKPQTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 157
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+P+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 158 LKPNNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 217
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 218 DAMEKLERAYSSSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLNGT 275
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 276 PPTT-VSVRTSVKEAAQMMKENHTTAILVTDQGAITGIFTSKDVVLRVIAPGLDPATCSV 334
Query: 288 ERFI 291
R +
Sbjct: 335 VRVM 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M A+L+TD A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 284 TSVKEAAQMMKENHTTAILVTDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 342
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 343 DFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMGTGDNEG 402
Query: 184 SA 185
A
Sbjct: 403 PA 404
>gi|164656969|ref|XP_001729611.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
gi|159103504|gb|EDP42397.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
Length = 681
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 17/299 (5%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
+R+ Q R ++ +E KP +PQ + AG TV LR ALT+P+
Sbjct: 15 TRKRQSRRDEAIRKRIETELSRKTGKPSTPQPGRRRNQVQAG---TVSALRPLPALTVPQ 71
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
++DA + A++R D VL+ D L+GI T KD+ R++A G+ P T VS IMT +
Sbjct: 72 TMSITDASQLCAAKRTDCVLVVDDEEHLAGIFTAKDLAYRIVAGGIDPRMTPVSSIMTVS 131
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
P+ + A EAL MV FRHLPV E+G+V+ +LDI K Y+A+ ++E+A
Sbjct: 132 PMVTRDTTSATEALSTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQK 191
Query: 186 IAAAVEGVERQWGSN-FSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAK 244
+ A+EGV+ +WG A ++++LRERM P L++I+ V V AA+
Sbjct: 192 LYHALEGVQNEWGGGPQQAMMQYVQSLRERMSMPELASILDSRTMPCTVGVRTTVRDAAR 251
Query: 245 KMREFRSNSALIVTGS------------KIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
M++ R+ + ++ + KI GI TSKDV++RV+A L PE V R +
Sbjct: 252 LMKQHRTTAVCVMENASGAQGERGIATGKIAGIFTSKDVVLRVIAAGLDPERCSVVRVM 310
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
Query: 68 TIVSDACRRMASRRVDAVLLTD-----------ANALLSGIVTDKDITTRVIAEGLRPDQ 116
T V DA R M R AV + + A ++GI T KD+ RVIA GL P++
Sbjct: 244 TTVRDAARLMKQHRTTAVCVMENASGAQGERGIATGKIAGIFTSKDVVLRVIAAGLDPER 303
Query: 117 TVVSKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
V ++MT +P S SL+I EAL+KM G++ +LPVV+ + ++ ++D+ K Y
Sbjct: 304 CSVVRVMTPHPD-TASPSLSIQEALRKMHDGRYLNLPVVDVDARLVGVVDVLKLTY 358
>gi|295659197|ref|XP_002790157.1| CBS/PB1 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281862|gb|EEH37428.1| CBS and PB1 domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 671
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 143/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVMALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L T++
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLN-GLP 271
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V R
Sbjct: 272 PTTVSVRTSVREAAALMKENHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVR 331
Query: 290 FI 291
+
Sbjct: 332 VM 333
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KDI RVIA GL P+ V ++MT +P
Sbjct: 279 TSVREAAALMKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + ++ M +G
Sbjct: 338 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQVNTMSSNESEG 397
Query: 184 SA 185
A
Sbjct: 398 PA 399
>gi|226287801|gb|EEH43314.1| CBS and PB1 domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 661
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 143/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 71 TVMALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAG 130
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 131 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 190
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L T++
Sbjct: 191 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLN-GLP 249
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V R
Sbjct: 250 PTTVSVRTSVREAAALMKENHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPNTCSVVR 309
Query: 290 FI 291
+
Sbjct: 310 VM 311
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KDI RVIA GL P+ V ++MT +P
Sbjct: 257 TSVREAAALMKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPNTCSVVRVMTPHP 315
Query: 128 IFVTSDSLAIEALQKM------------VQGKFRHLPVV-ENGEVIAILDITKCLY 170
F +D AL+KM + G + +LPV+ E GE++ ++D+ K Y
Sbjct: 316 DFAPTDMSIQAALRKMHGAEETGLTISKLDGHYLNLPVMNEAGEIVGMVDVLKLTY 371
>gi|331220075|ref|XP_003322713.1| hypothetical protein PGTG_04250 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301703|gb|EFP78294.1| hypothetical protein PGTG_04250 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 746
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 146/266 (54%), Gaps = 17/266 (6%)
Query: 32 KPPSPQGESSSSVGGAGGER------TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAV 85
K P + ++ G +GG R TV LR ALT+P+ V+DA + A++R D V
Sbjct: 101 KRPGQKRTNNQPAGSSGGPRPKRQAGTVSALRPLPALTVPDNITVADASQLCAAKRTDCV 160
Query: 86 LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
L+ D + L GI T KD+ RVI +G+ P T VS IMTRNP+ + A EAL MV
Sbjct: 161 LVVDEDEHLCGIFTAKDLAFRVIGDGMDPRTTPVSAIMTRNPMVTRDTTSATEALTTMVT 220
Query: 146 GKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSN---- 200
FRHLPV + G+VI +LDITK ++++ ++E+A + A+EGV+ ++GS
Sbjct: 221 RGFRHLPVCNDEGDVIGLLDITKVFHESLEKLERAYGSSQKLYNAIEGVQSEFGSGGRGT 280
Query: 201 ----FSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
+ A++E LR +M P L +I+ A V V AA MRE + + +
Sbjct: 281 TPGAVNPLMAYVEALRNKMSFPDLGSILDARTSAATVGVKTSVKEAAVLMREHHTTAVCV 340
Query: 257 V--TGSKIQGILTSKDVLMRVVAQNL 280
+ G +I GI TSKD+++RV+A L
Sbjct: 341 MESDGRRIAGIFTSKDIVLRVIAAGL 366
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL-LSGIVTDKDITTRVIAEGLRPDQT 117
+ A T+ T V +A M AV + +++ ++GI T KDI RVIA GL
Sbjct: 312 TSAATVGVKTSVKEAAVLMREHHTTAVCVMESDGRRIAGIFTSKDIVLRVIAAGLDARTC 371
Query: 118 VVSKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
V ++MT +P SL+I EAL+KM G + +LPVV E G++ +D+ K Y
Sbjct: 372 SVVRVMTPHPDTALP-SLSIQEALRKMHDGHYLNLPVVDEAGQLQGCVDVLKLTY 425
>gi|156039609|ref|XP_001586912.1| CBS/PB1 domain-containing protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|154697678|gb|EDN97416.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 680
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 101 TVLALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 160
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 161 IKAANITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 220
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++T
Sbjct: 221 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLT-G 277
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V+ V AA M+E + + L+ G I GI TSKDV++RV+A L P V
Sbjct: 278 IPPTTVTVRTSVKEAAALMKENHTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDPSNCSV 337
Query: 288 ERFI 291
R +
Sbjct: 338 VRVM 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 287 TSVKEAAALMKENHTTAVLVQDGGSI-TGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHP 345
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 346 DFAPMDMSIQAALRKMHDGHYLNLPVMNDQGEIVGMVDVLKLTYATLEQI 395
>gi|342874129|gb|EGU76199.1| hypothetical protein FOXB_13271 [Fusarium oxysporum Fo5176]
Length = 668
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 90 TVLALKPSQALQIKPGTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 149
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 150 AKASAITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 209
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L T++
Sbjct: 210 DAMEKLERAYSSSRKLYDALEGVQSELGS--TQPQQIIQYVEALRSKMSGPTLETVLN-G 266
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P
Sbjct: 267 VPPTTVSVRTSVKEAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 321
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 276 TSVKEAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 334
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ M ++G
Sbjct: 335 DFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLDQINAMSNTNDEG 394
Query: 184 SA 185
A
Sbjct: 395 PA 396
>gi|327357586|gb|EGE86443.1| CBS and PB1 domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 663
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 91 TVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 150
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 151 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 210
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L +++
Sbjct: 211 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLESVLN-GLP 269
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 270 PTTVSVRTSVREAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVR 329
Query: 290 FI 291
+
Sbjct: 330 VM 331
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 277 TSVREAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHP 335
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y
Sbjct: 336 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTY 379
>gi|325182681|emb|CCA17136.1| myosin 29 putative [Albugo laibachii Nc14]
Length = 3123
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 148/249 (59%), Gaps = 6/249 (2%)
Query: 42 SSVG-GAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTD 100
S+VG G R V LR L I E V++A R+M RVDAV++T + L GI+TD
Sbjct: 2562 SAVGPSEGAFRPVSMLRPRSVLHIDENDSVTEAARQMRHGRVDAVVVTTDDGDLRGILTD 2621
Query: 101 KDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEV 159
DIT RV+ + L PD V+ +MT NP V +D AIEA+ KM++G+F+HLPVV +NG +
Sbjct: 2622 TDITRRVLGKHLDPDTCCVATVMTVNPCCVQADESAIEAITKMLEGRFKHLPVVGKNGSI 2681
Query: 160 IAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPS 219
ILDI+KCLYDAI MEK Q S AAA + + GS ++ + + + E++ P+
Sbjct: 2682 SGILDISKCLYDAIVCMEKV--QQSTEAAASDFAKDHSGS--ASLHRMLAPMMEKLVSPT 2737
Query: 220 LSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQN 279
++ I+ E +VSP V AA M + R + ++ + G++T KD+L +VVA+
Sbjct: 2738 IAMILKEEGDPPVVSPHAKVTEAAVLMTKHRKAAIVLDHSKSVIGMVTPKDLLRKVVAKG 2797
Query: 280 LSPELTLVE 288
L + TLVE
Sbjct: 2798 LCADDTLVE 2806
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 144/276 (52%), Gaps = 39/276 (14%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G R V +LR SK LTI + +S+A R M+ DA L+ +LSGI+TD D+T RV
Sbjct: 2169 GDTRNVARLRPSKILTIADTLNISEAARVMSQSHADAALVISKEGVLSGILTDTDVTHRV 2228
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDIT 166
+A G P+ T ++ +MT +P FV + A++A+ M++GKFRHLPVV++ G V IL I
Sbjct: 2229 VALGNDPNVTCIADVMTSSPKFVDENDSAMQAMYIMLEGKFRHLPVVDSRGTVSGILRIQ 2288
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNF--------SAPYAFIETLRERMFKP 218
KCL+DA+ R+EKA + S + E VE Q S + + + +++ P
Sbjct: 2289 KCLHDAVIRLEKAQRKSSGVLQ--ENVESQLRSTLLGAKLHGEQSIMQLVTPMVQKLLSP 2346
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--------------------- 257
+L +I+ +V + V ++KM F +AL+V
Sbjct: 2347 TLESILQNTEMPPVVYSCESVLSVSRKM-AFAKKAALVVEDVESAPLIGIAASVNQTKAR 2405
Query: 258 ------TGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
G ++ G+LT+ D+LMRV+A NL P TLV
Sbjct: 2406 RDSDGTAGKRLIGLLTANDILMRVIASNLDPSTTLV 2441
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 137/272 (50%), Gaps = 31/272 (11%)
Query: 38 GESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGI 97
G++ R+V LR SKALT+ E V A M R AVL+ ++ LSGI
Sbjct: 1145 GKAHGQHNTHNSTRSVAHLRPSKALTVSESLTVFQAAELMQRNRTSAVLVVCDDSALSGI 1204
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-EN 156
TD D RV+ GL P T++ +MT P FVT + A++AL MV G FRHLPVV +
Sbjct: 1205 FTDTDTAQRVLGRGLDPSATLIGAVMTPKPKFVTLEDSAMDALDMMVTGVFRHLPVVSKE 1264
Query: 157 GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMF 216
G+V+ IL++ +CLYDAI +ME+ A + Q + A + ERM
Sbjct: 1265 GQVVGILNVARCLYDAIQQMERLAS------------DLQKELAHTPADAHVRDTLERML 1312
Query: 217 KPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSK-IQGILTSKDVLMRV 275
PSL ++ + +V + +A +M R + +I + ++ + GILTSKD+L RV
Sbjct: 1313 SPSLQHVLRGRSPPVVVEKTCLLADVVPEMARTRYPALIIDSDTRQLCGILTSKDLLHRV 1372
Query: 276 VAQNL-----------------SPELTLVERF 290
VA+ + SPE+TL+ F
Sbjct: 1373 VAKRVGMHTMIGDVMTHNPDSGSPEMTLLSAF 1404
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 119/234 (50%), Gaps = 22/234 (9%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
+RTV +L SK LTI + V D M RR VL+TD L GIVTD D+T RV++
Sbjct: 1829 DRTVAQLGPSKVLTISDSASVKDLVTLMTRRRSQCVLVTDEEGTLCGIVTDTDLTHRVVS 1888
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
E D V IMTR+P FV++ A+ AL M++GKFRHLPVV ++ IL I CL
Sbjct: 1889 EKRSMDGCPVRAIMTRDPTFVSAQDSALNALCIMLEGKFRHLPVVNAKSIVGILHIGNCL 1948
Query: 170 YDAISRMEKA-----AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
++AI +MEKA A QGS A A G + ++ L +++
Sbjct: 1949 FEAIQKMEKAQDSTKARQGSLGARAFRG-----------------SFLGQILSSKLRSVL 1991
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
E+ V P V +K+M R + ++ + + GI T K +L V+++
Sbjct: 1992 QEDTPAPRVDPFTSVYEVSKRMTASRKAAMVVNSMGEFMGIFTPKSLLENVLSR 2045
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 134/251 (53%), Gaps = 19/251 (7%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA--LLSGIVTDKDITTRVI 108
RTV LR S A+T+ E V++A + M +R D VL+ + + L+ GI+TD DI RV+
Sbjct: 1490 RTVSSLRPSIAVTVSEDATVAEAAQLMKQKRTDVVLVVASVSSKLMRGILTDTDICWRVL 1549
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
A+ L P +T+V+ +MT N FV A++A+ M QG FRHLPVV+NG + +L+I +C
Sbjct: 1550 AKHLDPYRTLVASVMTENIKFVAPQDDALDAMLAMHQGHFRHLPVVDNGAITGVLNIGRC 1609
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
LYD R+E A + ++ S + + E++ P+L T++ E
Sbjct: 1610 LYDVAKRLETANASNEKLKSSFHS---------SKITQMLRPMLEKLASPTLRTLLDEQE 1660
Query: 229 KVAIVSPSDP----VAVAAKKMREFRSNSALIV---TGSKIQGILTSKDVLMRVVAQNLS 281
+ SP P V +A + M R +AL+V ++ G+ T ++L+ V+ L
Sbjct: 1661 EAGAASPRIPMGTSVQIALECMATAR-KAALVVDPADHDRLCGLFTPNELLLGVIGNRLD 1719
Query: 282 PELTLVERFIM 292
P+ T +E ++
Sbjct: 1720 PKTTRIESVML 1730
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 59/239 (24%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L G++T DI RVIA L P T+V+ +MT P V ++AL M + HLPV
Sbjct: 2416 LIGLLTANDILMRVIASNLDPSTTLVADVMTSTPDTVPPSMSLVDALHLMHEHHTLHLPV 2475
Query: 154 VENGE--VIAILDITKCLYDAISRMEKAAEQGSAIAAA-VEGVERQWGSNFSAPYAF--- 207
VE+G ++ ++D+ Y + QG+A++ +G + W + + A
Sbjct: 2476 VEDGSGIILGLIDVLSLCYGTFA-------QGAAVSQGNFDGGD--WRAFWDVSLALTGD 2526
Query: 208 -----------------IETLRERMFKPSLSTIITENAKVAIVSPS-------------- 236
+ET R++ S++ + + K + V PS
Sbjct: 2527 TESEVSMSVVDSKYARSVETRRQKT-----SSLYSFDGKGSAVGPSEGAFRPVSMLRPRS 2581
Query: 237 -------DPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTLV 287
D V AA++MR R ++ ++ T ++GILT D+ RV+ ++L P+ V
Sbjct: 2582 VLHIDENDSVTEAARQMRHGRVDAVVVTTDDGDLRGILTDTDITRRVLGKHLDPDTCCV 2640
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 32/249 (12%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE--GLRPDQ 116
S + + + +++D MA R A+++ L GI+T KD+ RV+A+ G+
Sbjct: 1324 SPPVVVEKTCLLADVVPEMARTRYPALIIDSDTRQLCGILTSKDLLHRVVAKRVGM---H 1380
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAIS 174
T++ +MT NP + + + A M +G F HLPVV + ++ + D+ + +
Sbjct: 1381 TMIGDVMTHNPDSGSPEMTLLSAFHVMHEGNFLHLPVVDPDTKMIVGVTDVLSIVSASFG 1440
Query: 175 RMEK--AAEQGSAI------AAAVEGVERQWG-SNFSA-PYAFIETLRERM---FKPSLS 221
E+ +E A+ A E V R S S A ++ R R +PS++
Sbjct: 1441 EHERRDRSEIWQAVLSSKENAFKTESVSRMSSVSGLSCRSGATSKSHRTRTVSSLRPSIA 1500
Query: 222 TIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSK---IQGILTSKDVLMRVVAQ 278
++E+A VA AA+ M++ R++ L+V ++GILT D+ RV+A+
Sbjct: 1501 VTVSEDAT---------VAEAAQLMKQKRTDVVLVVASVSSKLMRGILTDTDICWRVLAK 1551
Query: 279 NLSPELTLV 287
+L P TLV
Sbjct: 1552 HLDPYRTLV 1560
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V++A M R A++L + +++ G+VT KD+ +V+A+GL D T+V IMT +P +
Sbjct: 2757 VTEAAVLMTKHRKAAIVLDHSKSVI-GMVTPKDLLRKVVAKGLCADDTLVETIMTVDPEY 2815
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQG 183
+ ++ ++ L+ M +PV+ E+G++ ++D+ Y S + +G
Sbjct: 2816 LLPNAKVLDGLRGMYDAGQLFMPVITESGQLHGMVDVLSLSYGQFSNLNTGNAKG 2870
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANA-LLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
IP GT V A MA+ R A+++ A+ L G+ T ++ VI L P T + +
Sbjct: 1669 IPMGTSVQIALECMATARKAALVVDPADHDRLCGLFTPNELLLGVIGNRLDPKTTRIESV 1728
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCL 169
M +P T+ + +EAL+ M + +LPV+ + + IA L CL
Sbjct: 1729 MLTDPEVATASTTVLEALRIMHDSQCLNLPVICDNSHDTIAGLVDVLCL 1777
>gi|225560596|gb|EEH08877.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus
G186AR]
gi|325088886|gb|EGC42196.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus H88]
Length = 668
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 97 TVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 156
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 157 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 216
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L +++
Sbjct: 217 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLESVLN-GLP 275
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 276 PTTVSVRTSVREAATLMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVR 335
Query: 290 FI 291
+
Sbjct: 336 VM 337
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 283 TSVREAATLMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHP 341
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + ++ M +G
Sbjct: 342 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQVNSMSTNENEG 401
Query: 184 SA 185
A
Sbjct: 402 PA 403
>gi|261206284|ref|XP_002627879.1| CBS/PB1 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592938|gb|EEQ75519.1| CBS and domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239610889|gb|EEQ87876.1| CBS and domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 666
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 94 TVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 153
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 154 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 213
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L +++
Sbjct: 214 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLESVLN-GLP 272
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 273 PTTVSVRTSVREAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVR 332
Query: 290 FI 291
+
Sbjct: 333 VM 334
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 280 TSVREAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHP 338
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y
Sbjct: 339 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTY 382
>gi|154278497|ref|XP_001540062.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413647|gb|EDN09030.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 403
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 97 TVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 156
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 157 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 216
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L +++
Sbjct: 217 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLESVLN-GLP 275
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 276 PTTVSVRTSVREAATLMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVIR 335
Query: 290 FI 291
+
Sbjct: 336 VM 337
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 283 TSVREAATLMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPNTCSVIRVMTPHP 341
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y
Sbjct: 342 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTY 385
>gi|367031380|ref|XP_003664973.1| hypothetical protein MYCTH_2135067 [Myceliophthora thermophila ATCC
42464]
gi|347012244|gb|AEO59728.1| hypothetical protein MYCTH_2135067 [Myceliophthora thermophila ATCC
42464]
Length = 1103
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 94 TVLALRPSQALQIKPQTTVAEAAQLMAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAG 153
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+P +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 154 LKPTNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 213
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 214 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 270
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V+ V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 271 LPPTTVTVRTSVKEAAQLMKENHTTAVLVTDQGAITGIFTSKDVVLRVIAPGLDPATCSV 330
Query: 288 ERFI 291
R +
Sbjct: 331 VRVM 334
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+TD A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 280 TSVKEAAQLMKENHTTAVLVTDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 338
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ ++GE++ ++D+ K Y + I+ M +G
Sbjct: 339 DFAPMDMSIQAALRKMHDGHYLNLPVMNDSGEIVGMVDVLKLTYATLEQINTMNTTDNEG 398
Query: 184 SA 185
A
Sbjct: 399 PA 400
>gi|326480461|gb|EGE04471.1| CBS and PB1 domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 696
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 24/290 (8%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSK-PPSPQGESSSSVGGAGGERTVKKLRLSKALTIP 65
SR S +R TS R SS+ G SK PP TV L+ S+AL I
Sbjct: 104 SRPSGERWRRTSVRRSSTLQGPTHSKGPPG----------------TVLALKPSQALQIK 147
Query: 66 EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G+R + +IMT+
Sbjct: 148 PNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEIMTK 207
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGS 184
NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC YDA+ ++E+A
Sbjct: 208 NPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSR 267
Query: 185 AIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
+ A+EGV+ + GS S P ++E LR +M P+L +++ VS V
Sbjct: 268 KLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVL-NGLPPTTVSVRTSVKE 324
Query: 242 AAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
AA M+E + + L+ I GI TSKDV++RV+A L P V R +
Sbjct: 325 AAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSVVRVM 374
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 320 TSVKEAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 378
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 379 DFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 428
>gi|336376304|gb|EGO04639.1| hypothetical protein SERLA73DRAFT_118591 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389355|gb|EGO30498.1| hypothetical protein SERLADRAFT_432066 [Serpula lacrymans var.
lacrymans S7.9]
Length = 688
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 147/255 (57%), Gaps = 15/255 (5%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PE V++A + A++R D VL+ D LSGI T KD+ RV A+G
Sbjct: 99 TVAALRPSLALTVPENITVAEASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAYRVTADG 158
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS+IMTR+P+ + A +ALQ MVQ FRHLPV E G V+ +LDITK +
Sbjct: 159 LDPHTTPVSQIMTRSPMVTRDTTSATDALQLMVQRHFRHLPVCNEEGNVVGLLDITKVFH 218
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFS------APYAFIETLRERMFKPSLSTII 224
+A++++E+++ + A+ GV+ + G + A A+++ LRE+ P L+T+I
Sbjct: 219 EALNKVERSSSASEKLYNALAGVQSELGPGMTSNPQAAAMLAYVDALREKTALPDLTTVI 278
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--------TGSKIQGILTSKDVLMRVV 276
+ A V+P V A+ MRE R+ + ++ K+ GI TSKD+++RV+
Sbjct: 279 DRCVQPATVTPKTTVREVARLMRERRTTAVCVMEFPAAVSDMFPKVVGIFTSKDIVLRVI 338
Query: 277 AQNLSPELTLVERFI 291
A L + V R +
Sbjct: 339 AAGLDAGMCSVIRVM 353
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-------GIVTDKDITTRVIA 109
R + T+ T V + R M RR AV + + A +S GI T KDI RVIA
Sbjct: 280 RCVQPATVTPKTTVREVARLMRERRTTAVCVMEFPAAVSDMFPKVVGIFTSKDIVLRVIA 339
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKC 168
GL V ++MT +P +AL++M G + +LPVV+ +G+++AI+D+ K
Sbjct: 340 AGLDAGMCSVIRVMTPHPDTAQPSMSVHDALKRMHNGHYLNLPVVDFDGQLMAIVDVLKL 399
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA-FIETL 211
Y + +M A + E W S + F E+L
Sbjct: 400 TYATLEQMN---------AMTADTAEGTWDSQGGPMWGKFFESL 434
>gi|389643690|ref|XP_003719477.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
70-15]
gi|351639246|gb|EHA47110.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
70-15]
Length = 701
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 104 TVLALKPSQALQIKPGTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 163
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 164 LKATNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 223
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 224 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRTKMSGPTLESVLN-G 280
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
V V AA+ M+E + + L+ +I GI TSKDV++RV+A L P
Sbjct: 281 MPPTTVGVKTSVKEAAQMMKENHTTAVLVQDQGQITGIFTSKDVVLRVIAPGLDP 335
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 290 TSVKEAAQMMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHP 348
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ ++GE++ ++D+ K Y + I+ M +G
Sbjct: 349 DFAPMDMSIQAALRKMHDGHYLNLPVMNDSGEIVGMVDVLKLTYATLEQINTMSSGDNEG 408
Query: 184 SA 185
A
Sbjct: 409 PA 410
>gi|330932518|ref|XP_003303808.1| CBS/PB1 domain-containing protein [Pyrenophora teres f. teres 0-1]
gi|311319951|gb|EFQ88097.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
Length = 666
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVLALKPSPALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GS+ A ++E +R++M P+L +++T
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQAEMGSSQPAEIINYVEAIRQKMSGPTLESVLT-GLP 271
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 272 PTTVSVRTSVREAAALMKEHHTTAVLVQDNGSITGIFTSKDVVLRVIAAGLDPSTCSVVR 331
Query: 290 FI 291
+
Sbjct: 332 VM 333
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 279 TSVREAAALMKEHHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPSTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 338 DFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTTDSEG 397
Query: 184 SA 185
A
Sbjct: 398 PA 399
>gi|240280165|gb|EER43669.1| CBS and PB1 protein [Ajellomyces capsulatus H143]
Length = 612
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 41 TVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 100
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 101 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 160
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GSN ++E LR++M P+L +++
Sbjct: 161 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLESVLN-GLP 219
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 220 PTTVSVRTSVREAATLMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPNTCSVVR 279
Query: 290 FI 291
+
Sbjct: 280 VM 281
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P+ V ++MT +P
Sbjct: 227 TSVREAATLMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPNTCSVVRVMTPHP 285
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + ++ M +G
Sbjct: 286 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQVNSMSTNENEG 345
Query: 184 SA 185
A
Sbjct: 346 PA 347
>gi|440472354|gb|ELQ41219.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae Y34]
gi|440489369|gb|ELQ69027.1| mitochondrial ribosomal protein subunit S4 [Magnaporthe oryzae
P131]
Length = 733
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 136 TVLALKPSQALQIKPGTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 195
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 196 LKATNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 255
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 256 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRTKMSGPTLESVLN-G 312
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
V V AA+ M+E + + L+ +I GI TSKDV++RV+A L P
Sbjct: 313 MPPTTVGVKTSVKEAAQMMKENHTTAVLVQDQGQITGIFTSKDVVLRVIAPGLDP 367
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 322 TSVKEAAQMMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHP 380
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ ++GE++ ++D+ K Y + I+ M +G
Sbjct: 381 DFAPMDMSIQAALRKMHDGHYLNLPVMNDSGEIVGMVDVLKLTYATLEQINTMSSGDNEG 440
Query: 184 SA 185
A
Sbjct: 441 PA 442
>gi|378725744|gb|EHY52203.1| hypothetical protein HMPREF1120_00418 [Exophiala dermatitidis
NIH/UT8656]
Length = 673
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 147/244 (60%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 91 TVLALKPSQALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 150
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +Q + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 151 IKANQVTIEQIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 210
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
+A+ ++E+A + A+EGV+ + GS S P ++E LR++M P+L +++
Sbjct: 211 EAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRQKMSGPTLESVLN-G 267
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 268 LPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSV 327
Query: 288 ERFI 291
R +
Sbjct: 328 VRVM 331
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 277 TSVKEAAQLMKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHP 335
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M +G
Sbjct: 336 DFAPTDMSIQAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINTMNTGESEG 395
Query: 184 SA 185
A
Sbjct: 396 PA 397
>gi|347835680|emb|CCD50252.1| similar to CBS and PB1 domain-containing protein [Botryotinia
fuckeliana]
Length = 716
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 137 TVLALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 196
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 197 IKAANITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 256
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 257 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVL-NG 313
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V+ V AA M+E + + L+ G I GI TSKDV++RV+A L P V
Sbjct: 314 IPPTTVTVRTSVKEAAALMKENHTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDPSNCSV 373
Query: 288 ERFI 291
R +
Sbjct: 374 VRVM 377
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 323 TSVKEAAALMKENHTTAVLVQDGGSI-TGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHP 381
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 382 DFAPMDMTIQAALRKMHDGHYLNLPVMNDQGEIVGMVDVLKLTYATLEQI 431
>gi|189194755|ref|XP_001933716.1| CBS/PB1 domain-containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979280|gb|EDU45906.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 666
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVLALKPSPALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + GS+ A ++E +R++M P+L +++T
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQAEMGSSQPAEIINYVEAIRQKMSGPTLESVLT-GLP 271
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 272 PTTVSVRTSVREAAALMKEHHTTAVLVQDNGSITGIFTSKDVVLRVIAAGLDPSTCSVVR 331
Query: 290 FI 291
+
Sbjct: 332 VM 333
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 279 TSVREAAALMKEHHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPSTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 338 DFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTTDSEG 397
Query: 184 SA 185
A
Sbjct: 398 PA 399
>gi|402080513|gb|EJT75658.1| mitochondrial ribosomal protein subunit S4 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 705
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 109 TVLALKPSQALQIKPATTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 168
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 169 LKATNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 228
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 229 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLNGK 286
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
+ + V AA+ MRE + + L+ +I GI TSKDV++RV+A L P
Sbjct: 287 PPTTVGVKTS-VREAAQIMRENHTTAVLVQDQGQITGIFTSKDVVLRVIAPGLDP 340
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 295 TSVREAAQIMRENHTTAVLVQD-QGQITGIFTSKDVVLRVIAPGLDPGNCSVVRVMTPHP 353
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 354 DFAPMDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQINTMSSGDSEG 413
Query: 184 SA 185
A
Sbjct: 414 PA 415
>gi|302503214|ref|XP_003013567.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
gi|291177132|gb|EFE32927.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
Length = 648
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 80 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 139
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 140 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 199
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 200 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 256
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 257 LPPTTVSVRTSVKEAATLMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSV 316
Query: 288 ERFI 291
R +
Sbjct: 317 VRVM 320
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 266 TSVKEAATLMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHP 324
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 325 DFAPTDMTIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 374
>gi|302652051|ref|XP_003017887.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
gi|291181469|gb|EFE37242.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
Length = 648
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 80 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 139
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 140 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 199
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 200 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 256
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 257 LPPTTVSVRTSVKEAATLMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSV 316
Query: 288 ERFI 291
R +
Sbjct: 317 VRVM 320
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 266 TSVKEAATLMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHP 324
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 325 DFAPTDMTIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 374
>gi|296822790|ref|XP_002850342.1| CBS/PB1 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837896|gb|EEQ27558.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
Length = 658
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 87 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 146
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 147 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 206
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 207 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 263
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 264 LPPTTVSVRTSVKEAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSV 323
Query: 288 ERFI 291
R +
Sbjct: 324 VRVM 327
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 273 TSVKEAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHP 331
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + ++
Sbjct: 332 DFAPTDMTIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQI 381
>gi|320590954|gb|EFX03395.1| cbs and pb1 domain containing protein [Grosmannia clavigera kw1407]
Length = 692
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 148/252 (58%), Gaps = 9/252 (3%)
Query: 35 SPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALL 94
+PQG + S G TV L+ S AL I T V++A + MA++R D VL+TD + +
Sbjct: 88 NPQGRAGRSRKAPPG--TVLALKPSPALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRI 145
Query: 95 SGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
+GI T KD+ RV+ G + + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+
Sbjct: 146 AGIFTAKDLAYRVVGAGTKANSVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 205
Query: 155 -ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIET 210
EN ++ ILDITKC YDA+ ++E+A + A+EGV+ + G+ S P ++E
Sbjct: 206 DENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQSELGT--SQPQQVIQYVEA 263
Query: 211 LRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
LR +M P+L T++ VS V AA+ M+E + + L+ I GI TSKD
Sbjct: 264 LRSKMSGPTLETVLN-GLPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKD 322
Query: 271 VLMRVVAQNLSP 282
V++RV+A L P
Sbjct: 323 VVLRVIAPGLDP 334
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 289 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 347
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 348 DFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMASGDSEG 407
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIET----LRERMFKPSLSTIITENAKVAIVSPSD 237
A ++ + S S + T L RM P L+ + +V V+P D
Sbjct: 408 PAWNKFWLSLDHETESMVSGDGSHHHTHNTNLGSRMMSPELN----RHQRVDSVAPGD 461
>gi|302697565|ref|XP_003038461.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
gi|300112158|gb|EFJ03559.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
Length = 658
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 140/246 (56%), Gaps = 17/246 (6%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE V++A + A++R D VL+ D LSGI T KD+ RV AEG
Sbjct: 62 TVAALKPSPALTVPENITVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEG 121
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T V IMTRNP+ + A EAL+ MV FRHLPV E+G V+ +LDI K
Sbjct: 122 LDPHTTPVHAIMTRNPMVTRDTTSATEALELMVTRHFRHLPVCNEDGNVVGLLDIAKVFQ 181
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-----YAFIETLRERMFKPSLSTIIT 225
+A+ ++E+++ + +A+ GV+ + G+ P A++E LRE+ P L+T++
Sbjct: 182 EALGKVERSSTASEQLMSAMAGVQSEMGNIGHNPQAAAMLAWVEKLREKTALPDLTTLMD 241
Query: 226 ENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG-----------SKIQGILTSKDVLMR 274
A V P V AA+ M+E R+ + ++ G +KI GI TSKDV++R
Sbjct: 242 ARTLPATVGPKTTVRDAARLMKEHRTTAVCVMEGLPASPGMHPNSAKIAGIFTSKDVVLR 301
Query: 275 VVAQNL 280
VVA L
Sbjct: 302 VVAAGL 307
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDA----------NALLSGIVTDKDITTRVIAEGL 112
T+ T V DA R M R AV + + +A ++GI T KD+ RV+A GL
Sbjct: 248 TVGPKTTVRDAARLMKEHRTTAVCVMEGLPASPGMHPNSAKIAGIFTSKDVVLRVVAAGL 307
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYD 171
+ V ++MT +P + +AL+KM G + +LPVVE +G ++AI+D+ Y
Sbjct: 308 DAGRCSVVRVMTPHPDTAPPNMSIHDALKKMHTGHYLNLPVVEADGTLVAIIDVLTLTYA 367
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
+ +M A Q +A AA EG WG F +
Sbjct: 368 TLEQM-NAVSQEAAPAADNEGGP-MWGRFFDS 397
>gi|327294133|ref|XP_003231762.1| CBS/PB1 domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326465707|gb|EGD91160.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 660
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 92 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 151
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 152 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 211
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 212 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 268
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 269 LPPTTVSVRTSVKEAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 328
Query: 288 ERFI 291
R +
Sbjct: 329 VRVM 332
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 278 TSVKEAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 336
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 337 DFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 386
>gi|340966856|gb|EGS22363.1| putative 40S ribosomal protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1118
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 145/242 (59%), Gaps = 3/242 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 82 TVLALKPSQALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 141
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 142 LKATNVAVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 201
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY-AFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV+ + G++ ++E LR +M P+L +I+
Sbjct: 202 DAMEKLERAYASSRRLYDALEGVQSELGTSHPQHLIQYVEALRHKMSGPTLESILDGRPP 261
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
V V+ V AA+ MRE + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 262 VT-VNVRTSVREAAQLMRENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSVVR 320
Query: 290 FI 291
+
Sbjct: 321 VM 322
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 268 TSVREAAQLMRENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 326
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE+I ++D+ K Y + I+ M +G
Sbjct: 327 DFAPMDMSIQAALRKMHDGHYLNLPVMNDAGEIIGMVDVLKLTYATLEQINSMNTTDNEG 386
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIETLRER-MFKPSLSTIITENAKVAIVSPSD 237
A ++ + S S +F T R + P + IT++ V+P D
Sbjct: 387 PAWNKFWLSLDHETESMVSGDGSFQHTHHTRSLVSPDMGRHITDS-----VAPGD 436
>gi|453080833|gb|EMF08883.1| CBS-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 662
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 152/258 (58%), Gaps = 9/258 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
+L K P G + S G TV L+ ++AL I GT V++A + MA++R D VL+T
Sbjct: 66 DLGKRRGPAGRARQSRKAPPG--TVLALKPNQALQIKPGTTVTEAAQMMAAKREDCVLVT 123
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
D + ++GI T KD+ RV+ GL +++IMT+NP+ +D+ A +AL MV+ F
Sbjct: 124 DDDDRIAGIFTAKDLAFRVVGAGLNARNVTIAEIMTKNPLCAKTDTSATDALDLMVRKGF 183
Query: 149 RHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY-- 205
RHLPV+ EN ++ +LDITKC Y+A+ ++E+A + A+EGV+ + GS S P
Sbjct: 184 RHLPVMDENHDISGVLDITKCFYEAMEKLERAYTSSKKLYDALEGVQAELGS--SQPQQV 241
Query: 206 -AFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQG 264
++E +R+RM P+L +++ VS V AA+ M+E + + L+ +I G
Sbjct: 242 IQYVEAVRQRMSGPTLESVLN-GLPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGQITG 300
Query: 265 ILTSKDVLMRVVAQNLSP 282
I TSKDV++RV+A L P
Sbjct: 301 IFTSKDVVLRVIAAGLDP 318
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 273 TSVKEAAQLMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAAGLDPANCSVIRVMTPHP 331
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D +AL+KM G + +LPV+ E+ E++ ++D+ K Y D I+ M +
Sbjct: 332 DFAPMDMSIQQALRKMHDGHYLNLPVMNKESDEIVGMVDVLKLTYATLDQINGMAAGDSE 391
Query: 183 GSA 185
G A
Sbjct: 392 GPA 394
>gi|315056125|ref|XP_003177437.1| CBS/PB1 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311339283|gb|EFQ98485.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
118893]
Length = 660
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 92 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 151
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 152 IRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 211
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 212 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 268
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 269 LPPTTVSVRTSVKEAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPSTCSV 328
Query: 288 ERFI 291
R +
Sbjct: 329 VRVM 332
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 278 TSVKEAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPSTCSVVRVMTPHP 336
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 337 DFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 386
>gi|296419865|ref|XP_002839512.1| CBS/PB1 domain-containing protein [Tuber melanosporum Mel28]
gi|295635673|emb|CAZ83703.1| unnamed protein product [Tuber melanosporum]
Length = 642
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD +SGI T KD+ RV+ G
Sbjct: 95 TVMALRPSQALQIKPNTTVAEAAQIMAAKREDCVLVTDDEDRISGIFTAKDLAFRVVGAG 154
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 155 VNARDVTIAQIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 214
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
+A+ ++E+A + A+EGV+ + GS S P ++E LR++M P L +++ N
Sbjct: 215 EAMEKLERAYASSRKLYDALEGVQSELGS--SQPQQIIHYVEALRQKMSGPDLQSVLDGN 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
+VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 273 PPT-VVSVRTTVKDAAAMMKENHTTAVLVQDSGSITGIFTSKDVVLRVIAAGLDP 326
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M AVL+ D+ ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 281 TTVKDAAAMMKENHTTAVLVQDSGSI-TGIFTSKDVVLRVIAAGLDPANCSVVRVMTPHP 339
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ E E++ ++D+ K Y + I+ M +G
Sbjct: 340 DFAPMDMSIQAALRKMHDGHYLNLPVMNEAAEIVGMVDVLKLTYATLEQINSMGTTDSEG 399
Query: 184 SA 185
A
Sbjct: 400 PA 401
>gi|398390317|ref|XP_003848619.1| hypothetical protein MYCGRDRAFT_76843 [Zymoseptoria tritici IPO323]
gi|339468494|gb|EGP83595.1| hypothetical protein MYCGRDRAFT_76843 [Zymoseptoria tritici IPO323]
Length = 629
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 144/235 (61%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR ++AL I V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 51 TVLALRPNQALQIKPTMTVTEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 110
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 111 LKAQNVTIAEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 170
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R+RM P+L +++
Sbjct: 171 DAMEKLERAYSSSKKLYDALEGVQAELGS--SQPQQIIQYVEAVRQRMSGPTLESVLNGL 228
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
V VS V AA+ M++ + + L+ +I GI TSKDV++RV+A L P
Sbjct: 229 PPVT-VSVRTSVKEAAQMMKDNHTTAVLVQDQGQITGIFTSKDVVLRVIAAGLDP 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 237 TSVKEAAQMMKDNHTTAVLVQD-QGQITGIFTSKDVVLRVIAAGLDPANCSVIRVMTPHP 295
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D +AL+KM G + +LPV+ E+ E++ ++D+ K Y D I+ M +
Sbjct: 296 DFAPMDMSIQQALRKMHDGHYLNLPVMNKESDEIVGMVDVLKLTYATLDQINGMSTGDNE 355
Query: 183 GSA 185
G A
Sbjct: 356 GPA 358
>gi|154301338|ref|XP_001551082.1| CBS/PB1 domain-containing protein [Botryotinia fuckeliana B05.10]
Length = 622
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 43 TVLALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 102
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 103 IKAANITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 162
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 163 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 219
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
V+ V AA M+E + + L+ G I GI TSKDV++RV+A L P
Sbjct: 220 IPPTTVTVRTSVKEAAALMKENHTTAVLVQDGGSITGIFTSKDVVLRVIAPGLDP 274
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 229 TSVKEAAALMKENHTTAVLVQDGGSI-TGIFTSKDVVLRVIAPGLDPSNCSVVRVMTPHP 287
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 288 DFAPMDMTIQAALRKMHDGHYLNLPVMNDQGEIVGMVDVLKLTYATLEQI 337
>gi|452978400|gb|EME78164.1| hypothetical protein MYCFIDRAFT_200475 [Pseudocercospora fijiensis
CIRAD86]
Length = 671
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 156/269 (57%), Gaps = 9/269 (3%)
Query: 18 SKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRM 77
SKR + +LSK P G ++ G TV L+ ++AL I V++A + M
Sbjct: 54 SKRDEVGKLEKDLSKKRGPAGRTAQRRKAPPG--TVLALKPNQALQIKPTLSVTEAAQLM 111
Query: 78 ASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAI 137
A++R D VL+TD + ++GI T KD+ RV+ GL+ + V++IMT+NP+ +D+ A
Sbjct: 112 AAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKANNVTVAEIMTKNPLCAKTDTSAT 171
Query: 138 EALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
+AL MV+ FRHLPV+ EN ++ ILDITKC YDA+ ++E+A + A+EGV+ +
Sbjct: 172 DALDLMVRKGFRHLPVMDENHDISGILDITKCFYDAMEKLERAYASSKKLYDALEGVQAE 231
Query: 197 WGSNFSAPY---AFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNS 253
GS + P ++E +R RM P+L +++ VS V AA+ M+E + +
Sbjct: 232 LGS--TQPQQIIQYVEAVRHRMSGPTLESVLN-GLPPTTVSVRTSVKEAAQLMKENHTTA 288
Query: 254 ALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
L+ +I GI TSKDV++RV+A L P
Sbjct: 289 VLVQDQGQITGIFTSKDVVLRVIAAGLDP 317
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 272 TSVKEAAQLMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAAGLDPGNCSVIRVMTPHP 330
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F D +AL+KM G + +LPV+ E+ E++ ++D+ K Y D I+ M +
Sbjct: 331 DFAPMDMSIQQALRKMHDGHYLNLPVMNKESDEIVGMVDVLKLTYATLDQINSMSTNEGE 390
Query: 183 GSAIA 187
G+ A
Sbjct: 391 GAGPA 395
>gi|296086527|emb|CBI32116.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 115/168 (68%), Gaps = 18/168 (10%)
Query: 9 RSQKRAPS-TSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
+S PS TSK+ +ENG + +K SP + V G RTV KLRLSKAL IPEG
Sbjct: 4 KSVHHGPSITSKKEVHAENGSSDAKASSP----TCLVYGV---RTVNKLRLSKALMIPEG 56
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
VSDACR M++R+VD VLLTD+NA+LSGIV DKDI TRVI E LRP+QT VSKIMTR+P
Sbjct: 57 ITVSDACRMMSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKIMTRHP 116
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVE----------NGEVIAILDI 165
I V SDSLAIEAL+KMVQGK VV+ NG+ I++L I
Sbjct: 117 ILVNSDSLAIEALEKMVQGKRLRSMVVQSWLLLKGQNANGKAISLLRI 164
>gi|380089158|emb|CCC12924.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 689
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 102 TVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 161
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 162 LKSNTVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 221
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 222 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 278
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 279 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 338
Query: 288 ERFI 291
R +
Sbjct: 339 VRVM 342
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 288 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 346
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F + AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 347 DFAPMEMTIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQI 396
>gi|336269220|ref|XP_003349371.1| CBS/PB1 domain-containing protein [Sordaria macrospora k-hell]
Length = 681
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 94 TVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 153
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 154 LKSNTVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 213
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 214 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 270
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 271 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 330
Query: 288 ERFI 291
R +
Sbjct: 331 VRVM 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 280 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 338
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F + AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 339 DFAPMEMTIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQI 388
>gi|258576507|ref|XP_002542435.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902701|gb|EEP77102.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 656
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 87 TVLSLKPSQALQIKPSTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 146
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 147 IRARDITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 206
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR++M P+L +++
Sbjct: 207 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRQKMSGPTLESVLNGL 264
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 265 PPIT-VSVRTSVKEAAALMKEHHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 323
Query: 288 ERFI 291
R +
Sbjct: 324 VRVM 327
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V +
Sbjct: 267 ITVSVRTSVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVR 325
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
+MT +P F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 326 VMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 381
>gi|409051394|gb|EKM60870.1| hypothetical protein PHACADRAFT_80818, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 472
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 140/247 (56%), Gaps = 18/247 (7%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S ALT+PE VS+A + A++R D VL+ D + LSGI T KD+ RV AEG
Sbjct: 58 TVAALKPSPALTVPESITVSEASQLCAAKRTDCVLVVDDDEGLSGIFTAKDLAYRVTAEG 117
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L P T VS IMTRNP+ + A EAL+ MV FRHLPV E G V+ +LDIT+ +
Sbjct: 118 LDPHTTPVSVIMTRNPMVTRDTTSATEALELMVSRHFRHLPVCNEEGNVVGLLDITRVFH 177
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNF------SAPYAFIETLRERMFKPSLSTII 224
+A+ ++E+++ + A+ GV+ + G +A +++E LRE+ P L+T++
Sbjct: 178 EALDKVERSSSASEKLYNALAGVQSELGGGVATNPQTAAMLSYVEALREKTALPDLTTVM 237
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG-----------SKIQGILTSKDVLM 273
+ A V P V AK M+E R+ + ++ +I GI TSKDV++
Sbjct: 238 DSRTEPATVGPKTTVREVAKLMKERRTTAVCVMESPSTSMGGTAATPRIAGIFTSKDVVL 297
Query: 274 RVVAQNL 280
RV+A L
Sbjct: 298 RVIAAGL 304
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLL----------TDANALLSGIVTDKDITTRVIAEGL 112
T+ T V + + M RR AV + T A ++GI T KD+ RVIA GL
Sbjct: 245 TVGPKTTVREVAKLMKERRTTAVCVMESPSTSMGGTAATPRIAGIFTSKDVVLRVIAAGL 304
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYD 171
+ V ++MT +P +AL+KM G + +LPV+E +G +IAI+D+ K Y
Sbjct: 305 DAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVIETDGRLIAIVDVLKLTYA 364
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNF 201
+ +M + + + A G WG F
Sbjct: 365 TLEQMNAMSAEAAGGAEPEGGP--MWGRFF 392
>gi|406864620|gb|EKD17664.1| ribosomal protein subunit S4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 672
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD ++GI T KD+ RV+ G
Sbjct: 95 TVLALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAG 154
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 155 IKAGNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 214
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++ +
Sbjct: 215 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVL-DG 271
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 272 KPPTTVSVRTSVREAAALMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 331
Query: 288 ERFI 291
R +
Sbjct: 332 VRVM 335
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 281 TSVREAAALMKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 339
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M +G
Sbjct: 340 DFAPMDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINTMSTGDSEG 399
Query: 184 SA 185
A
Sbjct: 400 PA 401
>gi|396483815|ref|XP_003841796.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
maculans JN3]
gi|312218371|emb|CBX98317.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
maculans JN3]
Length = 666
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 92 TVLALKPSPALQIKPNTTVAEAAQLMAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAG 151
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 152 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 211
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P +++E +R++M P+L +++T
Sbjct: 212 DAMEKLERAYSSSRKLYDALEGVQAEMGS--SQPQQIISYVEAIRQKMSGPTLESVLT-G 268
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 269 LPPTTVSVRTSVKEAAALMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAAGLDPATCSV 328
Query: 288 ERFI 291
R +
Sbjct: 329 VRVM 332
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 278 TSVKEAAALMKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAAGLDPATCSVVRVMTPHP 336
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 337 DFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTTDNEG 396
Query: 184 SA 185
A
Sbjct: 397 PA 398
>gi|336467143|gb|EGO55307.1| mitochondrial ribosomal protein subunit S4 [Neurospora tetrasperma
FGSC 2508]
Length = 687
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 102 TVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGG 161
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 162 LKANTVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 221
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 222 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 278
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 279 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 338
Query: 288 ERFI 291
R +
Sbjct: 339 VRVM 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 288 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 346
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 347 DFAPMDMTIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQI 396
>gi|407923859|gb|EKG16922.1| Phox/Bem1p [Macrophomina phaseolina MS6]
Length = 663
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 85 TVLALKPSSALQIKPHTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 144
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 145 IKARDITIAEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDIAGILDITKCFY 204
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R +M P+L +++T
Sbjct: 205 DAMEKLERAYSSSRKLYDALEGVQAELGS--SQPQQVIQYVEAIRAKMSGPTLESVLT-G 261
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 262 LPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAAGLDPGTCSV 321
Query: 288 ERFI 291
R +
Sbjct: 322 VRVM 325
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 271 TSVKEAAQLMKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAAGLDPGTCSVVRVMTPHP 329
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ E GE++ ++D+ K Y D I+ M+ +G
Sbjct: 330 DFAPIDMSIQAALRKMHDGHYLNLPVMSEAGEIVGMVDVLKLTYATLDQINTMQSGDSEG 389
Query: 184 SA 185
A
Sbjct: 390 PA 391
>gi|119496427|ref|XP_001264987.1| CBS/PB1 domain-containing protein [Neosartorya fischeri NRRL 181]
gi|119413149|gb|EAW23090.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
Length = 661
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 101 TVLALKPSQALQIKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNG 160
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ + V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 161 QKAREITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 220
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L T++ +
Sbjct: 221 DAMEKLERAYSSSRKLYDALEGVQTELGS--TQPQQIIQYVEALRSKMSGPTLETVL-DG 277
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 278 MPPTTVSVRTSVRDAAALMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSV 337
Query: 288 ERFI 291
R +
Sbjct: 338 VRVM 341
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 287 TSVRDAAALMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHP 345
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 346 DFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMQSHDDEG 405
Query: 184 SA 185
A
Sbjct: 406 PA 407
>gi|451855607|gb|EMD68899.1| hypothetical protein COCSADRAFT_135182 [Cochliobolus sativus
ND90Pr]
Length = 665
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVLALKPSPALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R++M P+L +++T
Sbjct: 213 DAMEKLERAYASSRKLYDALEGVQAEMGS--SQPQQIIQYVEAIRQKMSGPTLESVLT-G 269
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 270 LPPTTVSVRTSVKEAAALMKENHTTAVLVQDNGSITGIFTSKDVVLRVIAAGLDPMTCSV 329
Query: 288 ERFI 291
R +
Sbjct: 330 VRVM 333
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 279 TSVKEAAALMKENHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPMTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 338 DFAPVDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTTDSEG 397
Query: 184 SA 185
A
Sbjct: 398 PA 399
>gi|326472832|gb|EGD96841.1| CBS and PB1 domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 659
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 92 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 151
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+R + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 152 IRARDVTIVEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 211
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++
Sbjct: 212 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVLN-G 268
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 269 LPPTTVSVRTSVKEAAALMKENHTTALLVQDQGSITGIFTSKDVVLRVIAPGLDPATCSV 328
Query: 288 ERFI 291
R +
Sbjct: 329 VRVM 332
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 278 TSVKEAAALMKENHTTALLVQDQGSI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 336
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F +D AL+KM G + +LPV+ E+GE++ ++D+ K Y + ++
Sbjct: 337 DFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMVDVLKLTYATLEQI 386
>gi|452005050|gb|EMD97506.1| hypothetical protein COCHEDRAFT_1190356 [Cochliobolus
heterostrophus C5]
Length = 665
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 93 TVLALKPSPALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 153 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R++M P+L +++T
Sbjct: 213 DAMEKLERAYASSRKLYDALEGVQAEMGS--SQPQQIIQYVEAIRQKMSGPTLESVLT-G 269
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 270 LPPTTVSVRTSVKEAAALMKENHTTAVLVQDNGSITGIFTSKDVVLRVIAAGLDPMTCSV 329
Query: 288 ERFI 291
R +
Sbjct: 330 VRVM 333
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 279 TSVKEAAALMKENHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPMTCSVVRVMTPHP 337
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 338 DFAPVDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTTDSEG 397
Query: 184 SA 185
A
Sbjct: 398 PA 399
>gi|67539092|ref|XP_663320.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
gi|40743619|gb|EAA62809.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
gi|259484807|tpe|CBF81345.1| TPA: CBS and PB1 domain protein (AFU_orthologue; AFUA_1G06780)
[Aspergillus nidulans FGSC A4]
Length = 666
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 107 TVLALKPSSALQIKPSTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 166
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 167 LKARDITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 226
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++ +
Sbjct: 227 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRSKMSGPTLESVL-DG 283
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 284 MPPTTVSVRTTVKEAAALMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSV 343
Query: 288 ERFI 291
R +
Sbjct: 344 VRVM 347
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 293 TTVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHP 351
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 352 DFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINSMSTQDDEG 411
Query: 184 SA 185
A
Sbjct: 412 PA 413
>gi|408399597|gb|EKJ78696.1| hypothetical protein FPSE_01184 [Fusarium pseudograminearum CS3096]
Length = 682
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 98 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 157
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 158 AKASAVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 217
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L T++
Sbjct: 218 DAMEKLERAYSSSRKLYDALEGVQSELGS--TQPQQIIQYVEALRSKMSGPTLETVLN-G 274
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P
Sbjct: 275 VPPTTVSVRTSVREAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 284 TSVREAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 342
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ M ++G
Sbjct: 343 DFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLDQINAMSNNNDEG 402
Query: 184 SA 185
A
Sbjct: 403 PA 404
>gi|121702431|ref|XP_001269480.1| CBS/PB1 domain-containing protein [Aspergillus clavatus NRRL 1]
gi|119397623|gb|EAW08054.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
Length = 587
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I GT V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 25 TVMALKPSQALQIKPGTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGMG 84
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDIT+C Y
Sbjct: 85 QKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITRCFY 144
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 145 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRSKMSGPTLETVL-DG 201
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 202 LPPTTVSVRTSVRDAAALMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSV 261
Query: 288 ERFI 291
R +
Sbjct: 262 VRVM 265
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 211 TSVRDAAALMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHP 269
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 270 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINSMQTHDDEG 329
Query: 184 SA 185
A
Sbjct: 330 PA 331
>gi|46123863|ref|XP_386485.1| hypothetical protein FG06309.1 [Gibberella zeae PH-1]
Length = 680
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 96 TVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 155
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 156 AKASAVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 215
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L T++
Sbjct: 216 DAMEKLERAYSSSRKLYDALEGVQSELGS--TQPQQIIQYVEALRSKMSGPTLETVLN-G 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P
Sbjct: 273 VPPTTVSVRTSVREAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 327
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 282 TSVREAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 340
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ M ++G
Sbjct: 341 DFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLDQINAMSNNNDEG 400
Query: 184 SA 185
A
Sbjct: 401 PA 402
>gi|440634832|gb|ELR04751.1| hypothetical protein GMDG_06979 [Geomyces destructans 20631-21]
Length = 675
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 96 TVMALRPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAG 155
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 156 IKANSITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 215
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++ +
Sbjct: 216 DAMEKLERAYSSSRKLYDALEGVQSELGS--SQPQQIIQYVEALRLKMSGPTLESVL-DG 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A + P
Sbjct: 273 RPPTTVSVRTSVKEAAMLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGMDP 327
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA G+ P V ++MT +P
Sbjct: 282 TSVKEAAMLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGMDPANCSVVRVMTPHP 340
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F + AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 341 DFAPMEMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQI 390
>gi|302916341|ref|XP_003051981.1| CBS/PB1 domain-containing protein [Nectria haematococca mpVI
77-13-4]
gi|256732920|gb|EEU46268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 672
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 88 TVLALKPSPALQIKPATTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 147
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 148 AKASAITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 207
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L T++
Sbjct: 208 DAMEKLERAYSSSRKLYDALEGVQSELGS--TQPQQIIQYVEALRSKMSGPTLETVLN-G 264
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA+ M+E R+ + L+ I GI TSKDV++RV+A L P
Sbjct: 265 VPPTTVSVRTSVKEAAQLMKENRTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 319
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M R AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 274 TSVKEAAQLMKENRTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 332
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ M ++G
Sbjct: 333 DFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLDQINAMSNTNDEG 392
Query: 184 SA 185
A
Sbjct: 393 PA 394
>gi|350288234|gb|EGZ69470.1| hypothetical protein NEUTE2DRAFT_159933 [Neurospora tetrasperma
FGSC 2509]
Length = 1132
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 102 TVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGG 161
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 162 LKANTVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 221
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 222 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 278
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 279 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 338
Query: 288 ERFI 291
R +
Sbjct: 339 VRVM 342
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 288 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 346
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 347 DFAPMDMTIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQI 396
>gi|115389224|ref|XP_001212117.1| CBS/PB1 domain-containing protein [Aspergillus terreus NIH2624]
gi|114194513|gb|EAU36213.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 668
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 108 TVLALKPSQALQIKPNTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 167
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ + VS+IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 168 QKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 227
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L +++ +
Sbjct: 228 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRSKMSGPTLESVL-DG 284
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 285 MPPTTVSVRTSVKEAAALMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSV 344
Query: 288 ERFI 291
R +
Sbjct: 345 VRVM 348
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 294 TSVKEAAALMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHP 352
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 353 DFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINSMQTQDDEG 412
Query: 184 SA 185
A
Sbjct: 413 PA 414
>gi|358394371|gb|EHK43764.1| hypothetical protein TRIATDRAFT_171851, partial [Trichoderma
atroviride IMI 206040]
Length = 1006
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD ++GI T KD+ RV+ G
Sbjct: 84 TVLALKPSQALQIKPATTVSEAAQLMAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAG 143
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 144 LKAANVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 203
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L T++
Sbjct: 204 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRSKMSGPTLETVLN-G 260
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 261 IPPTTVSVRTSVKEAAAMMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 315
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 270 TSVKEAAAMMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 328
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M + +G
Sbjct: 329 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMSSDSGEG 388
Query: 184 SA 185
A
Sbjct: 389 PA 390
>gi|400601710|gb|EJP69335.1| CBS domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 664
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 3/233 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 88 TVMALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTG 147
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 148 QKSSNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 207
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
DA+ ++E+A + A+EGV + G+N ++E LR +M P+L T++
Sbjct: 208 DAMEKLERAYSSSRKLYDALEGVHSELGTNQPQQIIQYVEALRSKMSGPTLETVLN-GIP 266
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 267 PTTVSVRTSVKEAAALMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 319
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 274 TSVKEAAALMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 332
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 333 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINSMSTGDGEG 392
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIET-LRERMFKPSLS 221
A + ++ + S S + T L RM P ++
Sbjct: 393 PAWSKFWLSIDNETESMVSGDGSQHHTNLGSRMMTPDVA 431
>gi|164422735|ref|XP_001727992.1| CBS/PB1 domain-containing protein [Neurospora crassa OR74A]
gi|157069798|gb|EDO64901.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
OR74A]
Length = 610
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 25 TVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGG 84
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 85 LKANTVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 144
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 145 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 201
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 202 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 261
Query: 288 ERFI 291
R +
Sbjct: 262 VRVM 265
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 211 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 269
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 270 DFAPMDMTIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQI 319
>gi|425769641|gb|EKV08130.1| hypothetical protein PDIP_69880 [Penicillium digitatum Pd1]
gi|425771276|gb|EKV09724.1| hypothetical protein PDIG_60470 [Penicillium digitatum PHI26]
Length = 613
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I +++A + MA++R D VL+TD N ++GI T KD+ RV+ G
Sbjct: 47 TVLALKPSQALQIKPAMSIAEAAQLMAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGMG 106
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 107 LKAREVSVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 166
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 167 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQVIQYVEALRSKMSGPTLETVL-DG 223
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 224 LPPVTVSVRTTVKDAAALMKENHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 283
Query: 288 ERFI 291
R +
Sbjct: 284 VRVM 287
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 233 TTVKDAAALMKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 291
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M E+G
Sbjct: 292 DFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINNMSTQDEEG 351
Query: 184 SA 185
A
Sbjct: 352 PA 353
>gi|169618018|ref|XP_001802423.1| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
gi|160703532|gb|EAT80608.2| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 95 TVLALKPSPALQIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 154
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
++ + +IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 155 IKARDVTIEEIMTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDITKCFY 214
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E +R++M P+L +++
Sbjct: 215 DAMEKLERAYSSSRKLYDALEGVQAEMGS--SQPQQIIQYVEAIRQKMSGPTLESVLNGL 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V VS V AA M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 273 PPVT-VSVRTSVKEAASLMKENHTTAVLVQDQGSITGIFTSKDVVLRVIAAGLDPATCSV 331
Query: 288 ERFI 291
R +
Sbjct: 332 VRVM 335
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 281 TSVKEAASLMKENHTTAVLVQDQGSI-TGIFTSKDVVLRVIAAGLDPATCSVVRVMTPHP 339
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y D I+ + +G
Sbjct: 340 DFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMVDVLKLTYATLDQINNISTGDSEG 399
Query: 184 SA 185
A
Sbjct: 400 PA 401
>gi|255935165|ref|XP_002558609.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583229|emb|CAP91233.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 615
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I +++A + MA++R D VL+TD N ++GI T KD+ RV+ G
Sbjct: 47 TVLALKPSQALQIKPSMSIAEAAQLMAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGLG 106
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 107 LKAREVSVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 166
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 167 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQVIQYVEALRSKMSGPTLETVL-DG 223
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 224 LPPVTVSVRTTVKDAAALMKENHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 283
Query: 288 ERFI 291
R +
Sbjct: 284 VRVM 287
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 233 TTVKDAAALMKENHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 291
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F SD AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 292 DFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMVDVLKLTYATLEQINTMSTQDDEG 351
Query: 184 SA 185
A
Sbjct: 352 PA 353
>gi|70991156|ref|XP_750427.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
gi|66848059|gb|EAL88389.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
gi|159130901|gb|EDP56014.1| CBS and PB1 domain protein [Aspergillus fumigatus A1163]
Length = 661
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 101 TVLALKPSQALQIKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNG 160
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ + V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ ILDITKC Y
Sbjct: 161 QKAREITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 220
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS + P ++E LR +M P+L +++ +
Sbjct: 221 DAMEKLERAYSSSRKLYDALEGVQTELGS--TQPQQIIQYVEALRSKMSGPTLESVL-DG 277
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 278 LPPTTVSVRTSVRDAATLMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPATCSV 337
Query: 288 ERFI 291
R +
Sbjct: 338 VRVM 341
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 287 TSVRDAATLMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPATCSVVRVMTPHP 345
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M+ ++G
Sbjct: 346 DFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMQSHDDEG 405
Query: 184 SA 185
A
Sbjct: 406 PA 407
>gi|367048487|ref|XP_003654623.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
gi|347001886|gb|AEO68287.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
Length = 1055
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T V++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 94 TVLALKPSQALQIKPTTSVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 153
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 154 LKANNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 213
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 214 DAMEKLERAYASSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 270
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 271 TPPTTVSVRTSVREAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 330
Query: 288 ERFI 291
R +
Sbjct: 331 VRVM 334
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 280 TSVREAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 338
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ ++GE++ ++D+ K Y + I+ M A +G
Sbjct: 339 DFAPMDMSIQAALRKMHDGHYLNLPVMNDSGEIVGMVDVLKLTYATLEQINSMNSADSEG 398
Query: 184 SA 185
A
Sbjct: 399 PA 400
>gi|71006334|ref|XP_757833.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
gi|46097269|gb|EAK82502.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
Length = 708
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 143/260 (55%), Gaps = 21/260 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V LR ALT+P+ V+DA + A++R D VL+ D + L+GI T KD+ RV++ GL
Sbjct: 62 VSALRPLPALTVPQSISVADASQLCAAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGL 121
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYD 171
T VS IMTR+P+ + A EAL MV FRHLPV E+G+V+ +LDI K Y+
Sbjct: 122 DARNTPVSAIMTRSPMVTRDTTSATEALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYE 181
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA---FIETLRERMFKPSLSTIITENA 228
A+ ++E+A + A+EGV+ +WG + A +IE LR++M P L+TI+
Sbjct: 182 ALEKLERAHGSSQKLYNALEGVQSEWGGSAGPQQAMLQYIEALRQKMSIPDLTTILDSRT 241
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV--TGS---------------KIQGILTSKDV 271
V V AA+ M+E + + ++ TGS KI GI TSKDV
Sbjct: 242 LPCCVGVRTTVREAARLMKEHHTTAVCVMESTGSGPGTGQIGGGGAVSGKIAGIFTSKDV 301
Query: 272 LMRVVAQNLSPELTLVERFI 291
++RV+A L P+ V R +
Sbjct: 302 VLRVIAAGLDPKTCSVVRVM 321
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
++GI T KD+ RVIA GL P V ++MT +P EAL+KM G++ +LPV
Sbjct: 292 IAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHPDTAPPSLTIQEALRKMHDGRYLNLPV 351
Query: 154 VE-NGEVIAILDITKCLY 170
V+ + ++ ++D+ K Y
Sbjct: 352 VDVDSRLVGVVDVLKLTY 369
>gi|358385733|gb|EHK23329.1| hypothetical protein TRIVIDRAFT_79905 [Trichoderma virens Gv29-8]
Length = 670
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD ++GI T KD+ RV+ G
Sbjct: 95 TVLALKPSQALQIKPATTVSEAAQLMAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAG 154
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 155 LKAANVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 214
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 215 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRSKMSGPTLESVLN-G 271
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 272 IPPTTVSVRTSVKEAAAMMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 326
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 281 TSVKEAAAMMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 339
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 340 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQI 389
>gi|388852932|emb|CCF53380.1| uncharacterized protein [Ustilago hordei]
Length = 754
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 141/261 (54%), Gaps = 21/261 (8%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR ALT+P+ V+DA + A++R D VL+ D + L+GI T KD+ RV++ G
Sbjct: 93 TVSALRPLPALTVPQSISVADASQLCAAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAG 152
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T VS IMTR+P+ + A EAL MV FRHLPV E+G+V+ +LDI K Y
Sbjct: 153 LDARNTPVSAIMTRSPMVTRDTTSATEALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFY 212
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA---FIETLRERMFKPSLSTIITEN 227
+A+ ++E+A + A+EGV+ +WG + A +IE LR++M P LS+I+
Sbjct: 213 EALEKLERAHGSSQKLYNALEGVQSEWGGSAGPQQAMLQYIEALRQKMSIPDLSSILDSR 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV-----------------TGSKIQGILTSKD 270
+ V AA+ M+E + + ++ KI GI TSKD
Sbjct: 273 TLPCCIGVRTTVREAARLMKEHHTTAVCVMESTGTGPGTGQIGGGGAVSGKIAGIFTSKD 332
Query: 271 VLMRVVAQNLSPELTLVERFI 291
V++RV+A L P+ V R +
Sbjct: 333 VVLRVIAAGLDPKTCSVVRVM 353
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
++GI T KD+ RVIA GL P V ++MT +P EAL+KM G++ +LPV
Sbjct: 324 IAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHPDTALPSLTIQEALRKMHDGRYLNLPV 383
Query: 154 VE-NGEVIAILDITKCLYDAISRM 176
V+ + ++ I+D+ K Y + ++
Sbjct: 384 VDVDSRLVGIVDVLKLTYATLEQI 407
>gi|340518860|gb|EGR49100.1| predicted protein [Trichoderma reesei QM6a]
Length = 606
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD ++GI T KD+ RV+ G
Sbjct: 30 TVLALKPSQALQIKPATTVSEAAQLMAAKREDCVLVTDDEDRIAGIFTAKDLAFRVVGAG 89
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 90 LKAANVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 149
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 150 DAMEKLERAYSSSRKLYDALEGVQSELGA--SQPQQIIQYVEALRSKMSGPTLESVLN-G 206
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 207 IPPTTVSVRTSVKEAAAMMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDP 261
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 216 TSVKEAAAMMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 274
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 275 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQI 324
>gi|343428370|emb|CBQ71900.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 753
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 143/260 (55%), Gaps = 21/260 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V LR ALT+P+ V+DA + A++R D VL+ D + L+GI T KD+ RV++ GL
Sbjct: 94 VSALRPLPALTVPQSISVADASQLCAAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGL 153
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYD 171
T VS IMTR+P+ + A EAL MV FRHLPV E+G+V+ +LDI K Y+
Sbjct: 154 DARNTPVSAIMTRSPMVTRDTTSATEALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYE 213
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA---FIETLRERMFKPSLSTIITENA 228
A+ ++E+A + A+EGV+ +WG + A +IE LR++M P LS+I+
Sbjct: 214 ALEKLERAHGSSQKLYNALEGVQSEWGGSAGPQQAMLQYIEALRQKMSIPDLSSILDSRT 273
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV--TGS---------------KIQGILTSKDV 271
V V AA+ M+E + + ++ TG+ KI GI TSKDV
Sbjct: 274 LPCCVGVRTTVREAARLMKEHHTTAVCVMESTGTGPGNGQIGGGGAVSGKIAGIFTSKDV 333
Query: 272 LMRVVAQNLSPELTLVERFI 291
++RV+A L P+ V R +
Sbjct: 334 VLRVIAAGLDPKTCSVVRVM 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
++GI T KD+ RVIA GL P V ++MT +P EAL+KM G++ +LPV
Sbjct: 324 IAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHPDTAPPSLTIQEALRKMHDGRYLNLPV 383
Query: 154 VE-NGEVIAILDITKCLYDAISRM 176
V+ + ++ ++D+ K Y + ++
Sbjct: 384 VDVDSRLVGVVDVLKLTYATLEQI 407
>gi|353227418|emb|CCA77926.1| hypothetical protein PIIN_00640 [Piriformospora indica DSM 11827]
Length = 672
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 36/274 (13%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G + + TV L+ S+ALT+P+ V+DA + A++R D VL+ D LSGI T KD+
Sbjct: 66 GKSAAKGTVAALKPSQALTVPDNMTVADASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLA 125
Query: 105 TR------------------VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQG 146
R V A GL P T+VS IMT NP+ + A EALQ MVQ
Sbjct: 126 FRVSLPSSFECQPTDRVFEQVTAMGLDPRTTLVSTIMTPNPMVTRDTTSATEALQLMVQR 185
Query: 147 KFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP- 204
FRHLPV ++G V+ +LDITK ++A+ ++E+ + + +A+E V+ + S P
Sbjct: 186 GFRHLPVCNDDGNVVGLLDITKVFHEALDKIERGSSASQKLYSALESVQTELDGVASNPQ 245
Query: 205 ----YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG- 259
AF+E+LR++ P LST++ + A V P V AA+ M+E R+ + ++ G
Sbjct: 246 AAAMMAFVESLRDKTALPDLSTVMDSRTQPATVGPRTTVRDAARLMKENRTTAVCVMEGG 305
Query: 260 -----------SKIQGILTSKDVLMRVVAQNLSP 282
+KI GI TSKD+++RV+A L P
Sbjct: 306 ANTAGQPTGAPAKIAGIFTSKDIVLRVIAAGLDP 339
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 68 TIVSDACRRMASRRVDAVLL-----------TDANALLSGIVTDKDITTRVIAEGLRPDQ 116
T V DA R M R AV + T A A ++GI T KDI RVIA GL P +
Sbjct: 282 TTVRDAARLMKENRTTAVCVMEGGANTAGQPTGAPAKIAGIFTSKDIVLRVIAAGLDPGR 341
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISR 175
V ++MT +P +AL+KM G + +LPVVE +G ++AI+D+ K Y + +
Sbjct: 342 CSVVRVMTPHPDVAPPSMTIQDALKKMYNGHYLNLPVVESDGRLVAIIDVLKLTYATLEQ 401
Query: 176 MEKAAE 181
M A+
Sbjct: 402 MNALAD 407
>gi|238501480|ref|XP_002381974.1| CBS/PB1 domain-containing protein [Aspergillus flavus NRRL3357]
gi|220692211|gb|EED48558.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
gi|391863760|gb|EIT73059.1| CBS and PB1 domain protein [Aspergillus oryzae 3.042]
Length = 666
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 103 TVLALKPSQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 162
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 163 QKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 222
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 223 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRSKMSGPTLETVL-DG 279
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 280 LPPVTVSVRTSVKDAAAMMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 339
Query: 288 ERFI 291
R +
Sbjct: 340 VRVM 343
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 289 TSVKDAAAMMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 347
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 348 DFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMSTHDDEG 407
Query: 184 SA 185
A
Sbjct: 408 PA 409
>gi|171679826|ref|XP_001904859.1| hypothetical protein [Podospora anserina S mat+]
gi|170939539|emb|CAP64766.1| unnamed protein product [Podospora anserina S mat+]
Length = 677
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 96 TVLALKPSPALQIKPATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAG 155
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ +++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 156 LKAANVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 215
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
+A+ ++E+A + A+EGV+ + G+ S P ++E LR +M P+L +++
Sbjct: 216 EAMEKLERAYSSSRRLYDALEGVQSELGT--SQPQQIIQYVEALRSKMSGPTLESVLN-G 272
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA+ M+E + + L+ I GI TSKDV++RV+A L P V
Sbjct: 273 IPPTTVSVRTSVKEAAQLMKENHTTAVLVQDQGAITGIFTSKDVVLRVIAPGLDPATCSV 332
Query: 288 ERFI 291
R +
Sbjct: 333 VRVM 336
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M AVL+ D A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 282 TSVKEAAQLMKENHTTAVLVQDQGAI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 340
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRM 176
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + ++
Sbjct: 341 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQI 390
>gi|317142635|ref|XP_001818994.2| CBS/PB1 domain-containing protein [Aspergillus oryzae RIB40]
Length = 666
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 103 TVLALKPSQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 162
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 163 QKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 222
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 223 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRSKMSGPTLETVL-DG 279
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 280 LPPVTVSVRTSVKDAAAMMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 339
Query: 288 ERFI 291
R +
Sbjct: 340 VRVM 343
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M A+L+ D ++ +GI T KDI RVIA GL P V ++MT +P
Sbjct: 289 TSVKDAAAMMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPHP 347
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQG 183
F +D AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M ++G
Sbjct: 348 DFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMVDVLKLTYATLEQINSMSTHDDEG 407
Query: 184 SA 185
A
Sbjct: 408 PA 409
>gi|83766852|dbj|BAE56992.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 287
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I +++A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 25 TVLALKPSQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 84
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ V++IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 85 QKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 144
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV+ + GS S P ++E LR +M P+L T++ +
Sbjct: 145 DAMEKLERAYSSSRKLYDALEGVQTELGS--SQPQQIIQYVEALRSKMSGPTLETVL-DG 201
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V AA M+E + + L+ I GI TSKD+++RV+A L P V
Sbjct: 202 LPPVTVSVRTSVKDAAAMMKEHHTTALLVQDQGSITGIFTSKDIVLRVIAPGLDPSTCSV 261
Query: 288 ERFI 291
R +
Sbjct: 262 VRVM 265
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T V DA M A+L+ D ++ +GI T KDI RVIA GL P V +
Sbjct: 205 VTVSVRTSVKDAAAMMKEHHTTALLVQDQGSI-TGIFTSKDIVLRVIAPGLDPSTCSVVR 263
Query: 122 IMTRNPIFVTSDSLAIEALQKM 143
+MT +P F +D AL+KM
Sbjct: 264 VMTPHPDFAPADMSIQAALRKM 285
>gi|388580282|gb|EIM20598.1| CBS-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 818
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 146/261 (55%), Gaps = 21/261 (8%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+P+ V+DA + A++R D VL+ D L GI T KD+ RV+AE
Sbjct: 199 TVASLRPSPALTVPDSMTVADASQLCAAKRTDCVLVVDDEESLCGIFTAKDLAFRVVAES 258
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ T VS+IMT NP+ + A EAL+ MV FRHLPV ++G+V+ +LDIT+
Sbjct: 259 IDTRHTPVSEIMTPNPMVTRDSASATEALELMVARAFRHLPVCNDDGDVVGLLDITRVFN 318
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA-----FIETLRERMFKPSLSTIIT 225
+A+ ++E+ + A+EGV+ + G N ++ A +++ LRERM P L +++
Sbjct: 319 EALDKIERGYGASQKLYNALEGVQNELGGNTNSRQAAAMMNYVDALRERMALPDLQSVLD 378
Query: 226 ENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-------TGS--------KIQGILTSKD 270
A VS V AA+ M+++R+ + ++ TG +I GI TSKD
Sbjct: 379 ARTHPATVSVRTTVREAARIMKQYRTTAVCVMDNPISAGTGGHLNSQNQPRIAGIFTSKD 438
Query: 271 VLMRVVAQNLSPELTLVERFI 291
V++RV+A L P+ V R +
Sbjct: 439 VVLRVIAAGLQPDRCSVVRVM 459
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 68 TIVSDACRRMASRRVDAVLLTDA--------------NALLSGIVTDKDITTRVIAEGLR 113
T V +A R M R AV + D ++GI T KD+ RVIA GL+
Sbjct: 390 TTVREAARIMKQYRTTAVCVMDNPISAGTGGHLNSQNQPRIAGIFTSKDVVLRVIAAGLQ 449
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDA 172
PD+ V ++MT +P EAL+KM G + ++PVVE +G++IAI+D+ K Y
Sbjct: 450 PDRCSVVRVMTPHPDRAPPSMTIQEALRKMYTGHYLNMPVVEDDGKLIAIVDVLKLTYAI 509
Query: 173 ISRMEK-AAEQGSAIAAAVEGVERQWGSNF 201
+ ++ + EQ + G WG F
Sbjct: 510 LEQINSMSQEQQNETGEEASGP--MWGKFF 537
>gi|322708062|gb|EFY99639.1| ribosomal protein subunit S4 [Metarhizium anisopliae ARSEF 23]
Length = 666
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 83 TVLALKPSQALQIKPQTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 142
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ ++ IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 143 HKAANITIADIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 202
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV + G+ S P ++E LR +M P+L +++
Sbjct: 203 DAMEKLERAYSSSRKLYDALEGVHSELGA--SQPQQIIQYVEALRSKMSGPTLESVLN-G 259
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 260 IPPTTVSVRTSVKEAAALMKENHTTAVLVQDAGAITGIFTSKDVVLRVIAPGLDP 314
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ DA A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 269 TSVKEAAALMKENHTTAVLVQDAGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 327
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 328 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMSSGDGEG 387
Query: 184 SA 185
A
Sbjct: 388 PA 389
>gi|322697495|gb|EFY89274.1| ribosomal protein subunit S4 [Metarhizium acridum CQMa 102]
Length = 694
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 7/235 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+AL I T VS+A + MA++R D VL+TD + ++GI T KD+ RV+ G
Sbjct: 111 TVLALKPSQALQIKPQTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAG 170
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ ++ IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 171 HKAANITIADIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 230
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
DA+ ++E+A + A+EGV + G+ S P ++E LR +M P+L +++
Sbjct: 231 DAMEKLERAYSSSRKLYDALEGVHSELGA--SQPQQIIQYVEALRSKMSGPTLESVLN-G 287
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
VS V AA M+E + + L+ I GI TSKDV++RV+A L P
Sbjct: 288 IPPTTVSVRTSVKEAAALMKENHTTAVLVQDAGAITGIFTSKDVVLRVIAPGLDP 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ DA A+ +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 297 TSVKEAAALMKENHTTAVLVQDAGAI-TGIFTSKDVVLRVIAPGLDPANCSVVRVMTPHP 355
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQG 183
F D AL+KM G + +LPV+ + GE++ ++D+ K Y + I+ M +G
Sbjct: 356 DFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMVDVLKLTYATLEQINTMSSGDGEG 415
Query: 184 SA 185
A
Sbjct: 416 PA 417
>gi|50550993|ref|XP_502970.1| CBS/PB1 domain-containing protein [Yarrowia lipolytica CLIB122]
gi|49648838|emb|CAG81162.1| YALI0D18106p [Yarrowia lipolytica CLIB122]
Length = 593
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 143/234 (61%), Gaps = 4/234 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S A+TI T VS+A + M+++R + VL+ + + + SGI T KD+ +V+ G
Sbjct: 65 TVMALKPSPAVTIKPKTSVSEAAQLMSAKRENCVLVIEDDNI-SGIFTAKDLAFKVVGSG 123
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L T V +IMTRNP++ T+++ A E L MV FRHLPV+ EN EV ILDITKC +
Sbjct: 124 LDASVTTVDQIMTRNPLYATTNTSATEGLNLMVNKGFRHLPVMDENNEVSGILDITKCYH 183
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP-YAFIETLRERMFKPSLSTIITENAK 229
+A+ ++E+A + + A+EGV+ + GS+ A ++E L++RM P L +++ +
Sbjct: 184 EAMEKLERAYQSSRKLYDALEGVQTELGSSQPAQIINYVEALKQRMEGPDLESVL-DGTP 242
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
V V AA M++ + + L+ +++GI TSKDV++RV+A L P+
Sbjct: 243 PTYVDVRTTVFEAASLMKQNHTTAVLVTDHDQVKGIFTSKDVVLRVIAAGLDPK 296
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+TD + + GI T KD+ RVIA GL P V ++MT +P
Sbjct: 250 TTVFEAASLMKQNHTTAVLVTDHDQV-KGIFTSKDVVLRVIAAGLDPKNCSVIRVMTPHP 308
Query: 128 IFVTSDSLAIE-ALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
V +++I+ AL+ M +G++ +LPV+ N E++ ++D+ K Y + I+ M +
Sbjct: 309 D-VAPQNMSIQVALRTMHEGRYLNLPVMGPNAELVGVVDVLKLTYATLEQINTMSTGDSE 367
Query: 183 GSA 185
G A
Sbjct: 368 GPA 370
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIM 292
+ P V+ AA+ M R N L++ I GI T+KD+ +VV L +T V++ +
Sbjct: 77 IKPKTSVSEAAQLMSAKRENCVLVIEDDNISGIFTAKDLAFKVVGSGLDASVTTVDQIMT 136
Query: 293 R 293
R
Sbjct: 137 R 137
>gi|348664773|gb|EGZ04613.1| hypothetical protein PHYSODRAFT_362634 [Phytophthora sojae]
Length = 3265
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 139/243 (57%), Gaps = 7/243 (2%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTV KLR +K LT+ E T +++ R M ++D VL+ +L+GI+TD D+T RV++E
Sbjct: 1923 RTVAKLRPTKVLTVSESTTIAELSRTMGRNKMDCVLVVSDEGMLNGIITDTDLTRRVVSE 1982
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCL 169
D T V +MTRNP+FV+ D AI+AL M++GKFRHLPVVE NG V+ IL I KCL
Sbjct: 1983 NKPLDSTRVGDVMTRNPVFVSMDDPAIDALICMLEGKFRHLPVVERNGPVVGILSIAKCL 2042
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVER---QWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
YDAI +MEK+ + +A+ +E + G+ + ++ +MF P + T+I E
Sbjct: 2043 YDAIRKMEKSEQSSAALRHTLEKEMKSRVNGGARTGGVSQLLGSMVNKMFSPDIKTVIDE 2102
Query: 227 NA-KVAIVSPSDPVAVAAKKMREFRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSPEL 284
V V +K+M +AL+V + GI T K++L +V+A+ L
Sbjct: 2103 EGIDPPRVQRYTSVYEVSKQM-SITKKAALVVNNRGQYCGIFTPKEMLEKVLARGLPVHT 2161
Query: 285 TLV 287
T V
Sbjct: 2162 TPV 2164
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 156/292 (53%), Gaps = 19/292 (6%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
++S GSR S++R + + S + + P P+G R V LR +
Sbjct: 2644 LASMTGSRISRRRP----GKYTESHHSSMMDHVPEPEG----------AMRPVSMLRPQE 2689
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
I E V++A +RM RV+AV++T L GI+TD DIT RV+AE + P+ V+
Sbjct: 2690 VTRINEFITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVA 2749
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKA 179
+MT P V + AIEA+ KM++G+F+HLPV+ +G +LDI+KCLYDAI+ +EK
Sbjct: 2750 SVMTTKPSCVYMEDQAIEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAITCLEK- 2808
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
+Q + AA+ + GSN + + E+M +P++ + +++
Sbjct: 2809 VQQSTEAAASEFSRDLGTGSNLQ---RLLGPMMEKMVRPTVGDALDGEIMPPVINIHTTA 2865
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A AAK M + + ++ ++ G++T+KD+L ++VA+ L E T VE +
Sbjct: 2866 ARAAKLMANTKKAAIVLGDEQELCGMVTTKDLLRKLVAKGLYAETTTVEEVM 2917
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 138/248 (55%), Gaps = 19/248 (7%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTV +LR +KA+T+ E V +A R M S R AVL+T+ L+GI +D D RV+++
Sbjct: 1241 RTVARLRPAKAITVNEDATVLEAARMMKSHRAAAVLVTNWEGALTGIFSDTDAARRVVSK 1300
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKC 168
G+ + V +MT NP V+ + A++A+ M+ GKFRHLPV+ +G ++ IL++ KC
Sbjct: 1301 GVDSARITVGSVMTPNPSCVSLEDSAVDAMDIMLSGKFRHLPVISSHSGNIVGILNVAKC 1360
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
L+DAI R+E + ++++ G+ S+ + + E+M PSL +++
Sbjct: 1361 LHDAIRRVENMS----------SSLQQELGA--SSNNVMLRGMLEKMLSPSLQDVVSAPG 1408
Query: 229 KV--AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQ---GILTSKDVLMRVVAQNLSPE 283
+V +V + V A M E R + ++ + + Q GI T KDVL RV+A++L
Sbjct: 1409 EVMPPLVYGNMTVYEATTYMAETRRPALVVSSNPEFQELIGIFTPKDVLHRVIAEDLDVN 1468
Query: 284 LTLVERFI 291
T V + +
Sbjct: 1469 TTTVSQVM 1476
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 135/275 (49%), Gaps = 37/275 (13%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G R V KLR SKA+TI E V+DA + M+ + DA L+ + L GI+TD D+T RV
Sbjct: 2278 GNVRPVSKLRPSKAITISETYSVADAAKEMSIAQTDAALIIGRDGGLLGILTDTDVTRRV 2337
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
+A G P V MT +P FV A++A+ M++GKFRHLPVV E G V +L I
Sbjct: 2338 VALGNDPFYVSVLDAMTPDPKFVDERDSAMDAMFMMLEGKFRHLPVVDETGMVAGMLRIQ 2397
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQW-----GSNFSAPYAFIETLRERMFKPSLS 221
KCLYDAI+R+EK + S A +E+Q G+ A + + E++ P++
Sbjct: 2398 KCLYDAITRIEKVQQSSSGSLRA--RLEKQLQATGIGTGQGALKQLVAPMVEKLLSPTVD 2455
Query: 222 TIITENAKVAIVSPSDPVAVAAKKMREFR-----------SNSALIVTGS---------- 260
+I+ + +VS D V A++M R NS+ + G
Sbjct: 2456 SILEDETLPPLVSEHDTVMEVARQMAASRKAALIVEDPNGDNSSSVSGGHRSSISGGGYD 2515
Query: 261 --------KIQGILTSKDVLMRVVAQNLSPELTLV 287
K+ G+ T KD+L+RV L T V
Sbjct: 2516 IGTSALTRKVLGVFTPKDLLLRVTGAGLDAAETTV 2550
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 14/249 (5%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V LR A+TI E V +A M +R DA+L+ D L+GI+TD DI RV+A
Sbjct: 1580 RPVSSLRPLPAITIDEVASVFEAALLMKQKRTDALLVVDEAGGLNGILTDTDICRRVLAL 1639
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
L P++ V +MTR+ +V+ + AI+AL M +G FRHLPVV+ G + +L+I KC+Y
Sbjct: 1640 NLIPEEVPVCNVMTRDIKYVSPNDSAIDALLSMQEGHFRHLPVVDGGSIAGVLNIGKCIY 1699
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII-TENAK 229
D R+E A + + A++E + S + + E++ P+L +I+ E
Sbjct: 1700 DVSKRLEHATQSTDQLKASLEKSGKS-----STLQQLLAPMLEKLATPTLGSILENETQN 1754
Query: 230 VAIVSPSDP----VAVAAKKMREFRSNSALIVTG---SKIQGILTSKDVLMRVVAQNLSP 282
+ +P P V+ K M + +ALIV K+ GI + ++++ V+A+ L
Sbjct: 1755 GSTPAPRLPKSSLVSDVVKAMASTK-KAALIVDDFNFDKLVGIFSPNELVLNVIAKGLKT 1813
Query: 283 ELTLVERFI 291
T VE +
Sbjct: 1814 SATYVEEVM 1822
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 70 VSDACRRMASRRVDAVLLTDANAL--LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V +A MA R A++++ L GI T KD+ RVIAE L + T VS++MT NP
Sbjct: 1421 VYEATTYMAETRRPALVVSSNPEFQELIGIFTPKDVLHRVIAEDLDVNTTTVSQVMTPNP 1480
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
++ ++A M GKF +LPVV ++G+++ + D+ +
Sbjct: 1481 ESAAPETSVLDAFHIMHDGKFLNLPVVSPDSGDIMGVADVL------------------S 1522
Query: 186 IAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSD------PV 239
I+ A G R G F+A + + + + ++ ++ +KV D PV
Sbjct: 1523 ISLASFGEARDIGKFFNAAFDYHDDDTNSIVSGRSTSNMSNASKVRQQKDRDKGVNVRPV 1582
Query: 240 AV-----------------AAKKMREFRSNSALIVT-GSKIQGILTSKDVLMRVVAQNLS 281
+ AA M++ R+++ L+V + GILT D+ RV+A NL
Sbjct: 1583 SSLRPLPAITIDEVASVFEAALLMKQKRTDALLVVDEAGGLNGILTDTDICRRVLALNLI 1642
Query: 282 PE 283
PE
Sbjct: 1643 PE 1644
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 42/224 (18%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G+ T KD+ RV GL +T V ++MT +P + ++AL M + F HLP+V
Sbjct: 2527 GVFTPKDLLLRVTGAGLDAAETTVGQVMTPDPETAPPTTKLVDALHVMYEHNFLHLPIVN 2586
Query: 156 N--GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF------ 207
N ++ +LD+ Y + AAE G I + W S + A
Sbjct: 2587 NETDTIVGMLDVLSLCYGTFAS-GAAAESGKPIDE-----DSDWRSFWDVSLALGHDDDD 2640
Query: 208 -----------IETLRERMFKPSLSTIITENA--------KVAIVSPSD--------PVA 240
I R + S + + ++ V+++ P + VA
Sbjct: 2641 FSELASMTGSRISRRRPGKYTESHHSSMMDHVPEPEGAMRPVSMLRPQEVTRINEFITVA 2700
Query: 241 VAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPE 283
AAK+MR+ R + ++ T +++GILT D+ RV+A+++ PE
Sbjct: 2701 EAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPE 2744
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDAN-ALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+P+ ++VSD + MAS + A+++ D N L GI + ++ VIA+GL+ T V ++
Sbjct: 1762 LPKSSLVSDVVKAMASTKKAALIVDDFNFDKLVGIFSPNELVLNVIAKGLKTSATYVEEV 1821
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN--GEVIAILDITKCLYDAISRMEKAA 180
M +P T + + L M + +LPV+++ E++ ++D+ Y I
Sbjct: 1822 MQNDPEIATPSTSVQDGLHIMHDSRCLNLPVLKDDSNELVGMVDVLDLSYGTID------ 1875
Query: 181 EQGSAIAAAVEGVERQWGSNFSAPYAFI---------ETLRERMFKPSLSTIITE--NAK 229
+ E ++ W + + TL R + S + + K
Sbjct: 1876 ---AIYGENREQMQEFWNTTLQLDQPSLPSEAGDRERTTLMSRAEREEKSRTVAKLRPTK 1932
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQN 279
V VS S +A ++ M + + L+V+ + GI+T D+ RVV++N
Sbjct: 1933 VLTVSESTTIAELSRTMGRNKMDCVLVVSDEGMLNGIITDTDLTRRVVSEN 1983
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + A + MA+ + A++L D L G+VT KD+ +++A+GL + T V ++MT +P
Sbjct: 2863 TTAARAAKLMANTKKAAIVLGDEQEL-CGMVTTKDLLRKLVAKGLYAETTTVEEVMTMDP 2921
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
+ + ++ L+ + +PV+ ++GE++ + D+ CL
Sbjct: 2922 DLMGPNMSIVDGLRSLHDAGQLFMPVLADDGEILGMADVI-CL 2963
>gi|345568238|gb|EGX51135.1| hypothetical protein AOL_s00054g511 [Arthrobotrys oligospora ATCC
24927]
Length = 637
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 138/241 (57%), Gaps = 2/241 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ +AL I V++A + MA++R D VL+TD + ++GI T KD+ RV+
Sbjct: 68 TVMALKPGQALQIKPHVTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGGA 127
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+ V+ IMT+NP+ +D+ A +AL MV+ FRHLPV+ EN ++ +LDITKC Y
Sbjct: 128 IDARDVAVADIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDITKCFY 187
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
+A+ ++E++ + A+EGV+ G+ + ++E LR +M P+L T+++
Sbjct: 188 EAMEKLERSYSMSRKLYDALEGVQELGGAQPTQIIQYVEALRSKMAGPTLETVLS-GVPP 246
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERF 290
V+ V AA M+E + + L+ I GI TSKDV++RV+A L P V R
Sbjct: 247 TTVNVRTSVREAAALMKENHTTAVLVQDQGNITGIFTSKDVVLRVIAPGLDPATCSVVRV 306
Query: 291 I 291
+
Sbjct: 307 M 307
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D + +GI T KD+ RVIA GL P V ++MT +P
Sbjct: 253 TSVREAAALMKENHTTAVLVQDQGNI-TGIFTSKDVVLRVIAPGLDPATCSVVRVMTPHP 311
Query: 128 IFVTSDSLAIE-ALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY---DAISRMEKAAEQ 182
F + D L+I+ AL+KM G + +LPV+ E GE++ ++D+ K Y + I+ M+ +
Sbjct: 312 DFASMD-LSIQAALRKMHDGHYLNLPVMNEAGEIVGMVDVLKLTYATLEQINTMQTPDNE 370
Query: 183 GSA 185
G A
Sbjct: 371 GPA 373
>gi|325181316|emb|CCA15731.1| myosinlike protein putative [Albugo laibachii Nc14]
Length = 616
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 157/286 (54%), Gaps = 22/286 (7%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGA--------GGERTVKKLRLS 59
RR+ R + S++++ + G+ G+ + GG G T KK+ LS
Sbjct: 51 RRNSLRHDNLSEKSTRRTHSGH-----KLHGQRTEKSGGCKALGEVITGSTDTRKKM-LS 104
Query: 60 KA--LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
A L + + V D + M ++ DA LL DA L+GI+TD DI +V+A G P
Sbjct: 105 SARPLIQSDQSSVFDCVKMMVRQKTDAALLVDAKGSLTGILTDSDIAYKVVAMGRDPKMF 164
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
V ++MT NP V ++ I+AL KM+ GKFRHLPV +N +++ ILDI KC+YDAI+R++
Sbjct: 165 RVCEVMTPNPSCVAPNANPIDALNKMISGKFRHLPVADNEKIVGILDIAKCVYDAIARIQ 224
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYA--FIETLRERMFKPSLSTIITENAKVAIVSP 235
+ + V ++ S+F + A + LRE++F +LS I+ E+ V IV P
Sbjct: 225 HTYDVSD---DRLSEVVQKLRSHFPSVTAENLLMHLREKLFLATLSVIVNEDTVVPIVRP 281
Query: 236 SDPVAVAAKKMREFRSNSALIVT-GSKIQGILTSKDVLMRVVAQNL 280
+D AAK M R ++ ++ ++ GI+TSKD++ RVVA ++
Sbjct: 282 NDTAFQAAKLMLRERMSAVMVCNEADEMIGIMTSKDLMRRVVALDV 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M R+ AV++ + + GI+T KD+ RV+A + + VS +MT NP T
Sbjct: 288 AAKLMLRERMSAVMVCNEADEMIGIMTSKDLMRRVVALDVDSSKCHVSSVMTTNPYTATK 347
Query: 133 DSLAIEALQKMVQGKFRHLPVVENG--EVIAILDI 165
D+ +E L M G+F H+PV+++ +++ +LD+
Sbjct: 348 DTTILETLHSMHNGQFLHVPVLDSSKKKLVGLLDV 382
>gi|401888948|gb|EJT52892.1| hypothetical protein A1Q1_00797 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697658|gb|EKD00914.1| hypothetical protein A1Q2_04787 [Trichosporon asahii var. asahii
CBS 8904]
Length = 729
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 138/250 (55%), Gaps = 37/250 (14%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR S ALT+PEG ++DA + A++R D VL+ D LSGI T KD+ RV A+G
Sbjct: 143 TVAGLRPSPALTVPEGMSIADASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAFRVTADG 202
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
L P T V++IMTRNP+ + A EALQ MV FRHL +D
Sbjct: 203 LDPRTTTVAQIMTRNPMVTRDTTSATEALQVMVSRHFRHL----------------VFHD 246
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP------YAFIETLRERMFKPSLSTIIT 225
A++++E+++ S ++ A+ GV+ + G N +A A+++ LR+RM +P L++++
Sbjct: 247 ALAKVERSSSATSQLSMALAGVQTELGPNLTANPQAAAMMAYVDALRDRMAQPDLTSVLD 306
Query: 226 ENAKVAIVSPSDPVAVAAKKMREFRS--------NSALIVTG-------SKIQGILTSKD 270
+ V+P V AA+ M+E R+ N +++G KI GI TSKD
Sbjct: 307 TSLPPPTVTPRTSVREAARLMKERRTTAVCVLEPNGTSVMSGVSNNGVPPKIAGIFTSKD 366
Query: 271 VLMRVVAQNL 280
+++RV+A L
Sbjct: 367 IVLRVIAAGL 376
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANAL--------------LSGIVTDKDITTRVI 108
T+ T V +A R M RR AV + + N ++GI T KDI RVI
Sbjct: 313 TVTPRTSVREAARLMKERRTTAVCVLEPNGTSVMSGVSNNGVPPKIAGIFTSKDIVLRVI 372
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITK 167
A GL + V ++MT +P D +AL+KM G + +LPVVE +G ++ I+D+ K
Sbjct: 373 AAGLDSSRCSVVRVMTPHPDTAPPDMTVQDALKKMHTGHYLNLPVVESDGRLLGIVDVLK 432
Query: 168 CLYDAISRME 177
Y + +++
Sbjct: 433 LTYATLEQID 442
>gi|443899306|dbj|GAC76637.1| predicted dehydrogenase [Pseudozyma antarctica T-34]
Length = 650
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 131/247 (53%), Gaps = 21/247 (8%)
Query: 66 EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
E V+DA + A++R D VL+ D L+GI T KD+ RV++ GL T VS IMTR
Sbjct: 22 ESISVADASQLCAAKRTDCVLVVDEEEHLAGIFTAKDLAFRVVSAGLDARNTPVSTIMTR 81
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGS 184
+P+ + A EAL MV FRHLPV E+G+V+ +LDI K Y+A+ ++E+A
Sbjct: 82 SPMVTRDTTSATEALNTMVTRGFRHLPVCNEDGDVVGLLDIAKVFYEALEKLERAHGSSQ 141
Query: 185 AIAAAVEGVERQWGSNFSAPYA---FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
+ A+EGV+ +WG + A +IE LR++M P LS+I+ V V
Sbjct: 142 KLYNALEGVQSEWGGSAGPQQAMLQYIEALRQKMSIPDLSSILDSRTLPCCVGVRTTVRE 201
Query: 242 AAKKMREFRSNSALIV-----------------TGSKIQGILTSKDVLMRVVAQNLSPEL 284
AA+ M+E + + ++ KI GI TSKDV++RV+A L P+
Sbjct: 202 AARLMKEHHTTAVCVMESTGTGPGTGQIGGGGAVSGKIAGIFTSKDVVLRVIAAGLDPKT 261
Query: 285 TLVERFI 291
V R +
Sbjct: 262 CSVVRVM 268
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
++GI T KD+ RVIA GL P V ++MT +P EAL+KM G++ +LPV
Sbjct: 239 IAGIFTSKDVVLRVIAAGLDPKTCSVVRVMTPHPDTAPPSLTIQEALRKMHDGRYLNLPV 298
Query: 154 VE-NGEVIAILDITKCLYDAISRM 176
V+ + ++ ++D+ K Y + ++
Sbjct: 299 VDVDSRLVGVVDVLKLTYATLEQI 322
>gi|320580871|gb|EFW95093.1| hypothetical protein HPODL_3465 [Ogataea parapolymorpha DL-1]
Length = 624
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 35 SPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALL 94
SPQ S S G AG TV L+ S+A+ V +A + M+ + + VL+ D + LL
Sbjct: 62 SPQKRSKGSSGAAG---TVMSLKPSEAVICKPTNTVYEAAQLMSVTKENCVLVVDEDGLL 118
Query: 95 SGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
SGI T KD+ R++ L +QT + +IMT NP+ +LA +AL MV FRHLPVV
Sbjct: 119 SGIFTAKDLAFRIVGANLNANQTTIDQIMTPNPMCAKVSTLASDALSLMVNKGFRHLPVV 178
Query: 155 ENG-EVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA--FIETL 211
G +++ +LDITKC +A++++E+ E + A+EGV + G+ + + E L
Sbjct: 179 NEGNQIVGVLDITKCYNEAMTKLERMYESSKRLYDAMEGVTEELGTANQPVHVIKYFENL 238
Query: 212 RERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSK----IQGILT 267
R + P+L+++++E V AA MR+ ++ +A++V SK + GI T
Sbjct: 239 RNLVSGPTLNSVLSERTIPVCCDIKTTVYEAAILMRDNKT-TAVLVKDSKNNDEVTGIFT 297
Query: 268 SKDVLMRVVAQNLSPELTLVERFI 291
SKD+++RV+A + P V R +
Sbjct: 298 SKDIVLRVIAAGIDPRTCSVIRVM 321
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 68 TIVSDACRRMASRRVDAVLLTDA--NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
T V +A M + AVL+ D+ N ++GI T KDI RVIA G+ P V ++MT
Sbjct: 264 TTVYEAAILMRDNKTTAVLVKDSKNNDEVTGIFTSKDIVLRVIAAGIDPRTCSVIRVMTP 323
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAISRME 177
P + + S +AL++M +G++ +LPVV +N E++ ++D+ K Y +++++
Sbjct: 324 KPSYALASSSIHQALRQMFEGRYLNLPVVDDDNSEIVGVVDVLKLTYHTLNQLQ 377
>gi|323452546|gb|EGB08420.1| hypothetical protein AURANDRAFT_26475, partial [Aureococcus
anophagefferens]
Length = 295
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 149/263 (56%), Gaps = 8/263 (3%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVD 83
SE+ G+ + ++S+SV A G R+V+KLR + + T +SD C+ MA++R D
Sbjct: 2 SEDFGDDASDRGSVAKTSASVPSASGGRSVEKLRPEAPVVLEASTAISDVCKAMAAKRTD 61
Query: 84 AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKM 143
LLT A L+GIVTD D+ + +AEGL T V +IMTR P V + AI+AL+ M
Sbjct: 62 CALLTSAVGTLAGIVTDNDVARKAVAEGLDLAATPVERIMTRGPTCVRAGDGAIDALRSM 121
Query: 144 VQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEK--AAEQGSAIA-AAVEGVERQWGS 199
V FRHLPV+ + G ++ +L+I +CLY+AI ++EK A+ +GS +A + + + ++ G+
Sbjct: 122 VSNHFRHLPVLGDTGAIVGVLNIHRCLYEAIEKIEKLEASAKGSDVAESMLRALAKRKGA 181
Query: 200 NFSAPYAFIETLRERMFKPS---LSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
N + L E + S L +++ + +V + V AA+ + R + L
Sbjct: 182 NPKQLAKLVGPLMESLAGSSAKTLRSVLDDGRTDCLVDAAASVRDAARTIASTR-RAVLA 240
Query: 257 VTGSKIQGILTSKDVLMRVVAQN 279
+ GILT KDVL RVVA++
Sbjct: 241 TADGGLAGILTPKDVLNRVVARD 263
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA R +AS R AVL T A+ L+GI+T KD+ RV+A T ++ +MT NP
Sbjct: 224 VRDAARTIASTR-RAVLAT-ADGGLAGILTPKDVLNRVVARDA-ATSTPLAAVMTPNPDT 280
Query: 130 VTSDSLAIEALQKM 143
+ D+ +EAL M
Sbjct: 281 IALDATLLEALHMM 294
>gi|301113386|ref|XP_002998463.1| myosin-like protein [Phytophthora infestans T30-4]
gi|262111764|gb|EEY69816.1| myosin-like protein [Phytophthora infestans T30-4]
Length = 3298
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 139/235 (59%), Gaps = 5/235 (2%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTV KLR +K LT+ E T V++ R M ++D VL+ +L+GI+TD D+T RV++E
Sbjct: 1942 RTVAKLRPTKVLTVVETTTVAELSRTMGRNKMDCVLVVSEEGMLNGIITDTDLTRRVVSE 2001
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCL 169
D T+V +MTRNP+FV+ D AI+AL M++GKFRHLPVVE NG V+ IL+I KCL
Sbjct: 2002 NRPVDSTLVGDVMTRNPVFVSMDDPAIDALISMLEGKFRHLPVVERNGPVVGILNIAKCL 2061
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVER---QWGSNFSAPYAFIETLRERMFKPSLSTIITE 226
YDAI +MEK+ + +A+ +E + G+ + ++ +MF P + T+I E
Sbjct: 2062 YDAIRKMEKSEQSSAALRHTLEKEMKSRVNGGARAGGVSQLLGSMVNKMFSPDIKTVIEE 2121
Query: 227 NA-KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
+ V V +K+M + + ++ + GI T K++L +V+A+ L
Sbjct: 2122 EGVEPPRVQRFTSVFEVSKQMAVTKKGALVVNNRGQFCGIFTPKEMLEKVLARGL 2176
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 157/292 (53%), Gaps = 19/292 (6%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSK 60
++S GSR S++R + + S + + P P+G R V LR +
Sbjct: 2663 LASVTGSRVSRRRP----GKYTESHHSSMMDHIPEPEG----------AMRPVSMLRPQE 2708
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
I E V++A +RM RV+AV++T L GI+TD DIT RV+AE + P+ V+
Sbjct: 2709 VTRINEFITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVA 2768
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKA 179
+MT P+ V + AIEA+ KM++G+F+HLPV+ +G +LDI+KCLYDAI+ +EK
Sbjct: 2769 SVMTTKPMCVYMEDQAIEAITKMLEGRFKHLPVLGSDGTPQGMLDISKCLYDAITCLEK- 2827
Query: 180 AEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPV 239
+Q + AA+ + GSN + + E+M +P++ + +V+
Sbjct: 2828 VQQSTEAAASEFSRDLGTGSNLQ---RLLGPMMEKMVRPTVGDALDGEIMPPVVNIHTTA 2884
Query: 240 AVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A AAK M + + ++ ++ G++T+KD+L ++VA+ L E T VE +
Sbjct: 2885 ARAAKLMANTKKAAIVLGDEQELCGMVTTKDLLRKLVAKGLYAETTTVEEVM 2936
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 141/245 (57%), Gaps = 21/245 (8%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTV +LR +KA+T+ + V +A R M S R AVL+T+ L+GI +D D RVI++
Sbjct: 1260 RTVARLRPAKAITVNQEATVLEAARLMKSHRSAAVLVTNWEGALTGIFSDTDAARRVISK 1319
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKC 168
G+ P + + +MT NP V+ + A++A+ M+ GKFRHLPVV +G ++ +L++ KC
Sbjct: 1320 GMDPARVTIGSVMTPNPSCVSLEDSAVDAMDIMLSGKFRHLPVVSAHSGNIVGVLNVAKC 1379
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA 228
L+DAI R+E + ++++ G+ S+ A + + E+M PSL ++++
Sbjct: 1380 LHDAIRRVENMS----------TSLQQELGA--SSNNAMLRGMLEKMLSPSLLDVLSKPG 1427
Query: 229 KVA--IVSPSDPVAVAAKKMREFRSNSALIVTGS----KIQGILTSKDVLMRVVAQNLSP 282
+V +V + V A M E R AL+V+ + + GI T KDVL+RVVA++L
Sbjct: 1428 EVMSPLVYGNMTVYEATTYMAESR-RPALVVSSNPEAPDLIGIFTPKDVLLRVVAEDLDV 1486
Query: 283 ELTLV 287
T V
Sbjct: 1487 HTTPV 1491
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 137/275 (49%), Gaps = 37/275 (13%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G R V KLR SKA+TI E V+DA + M++ + DA L+ + L GI+TD D+T RV
Sbjct: 2297 GNVRPVSKLRPSKAITISETFSVADAAKEMSNAQTDAALVIGRDGGLLGILTDTDVTRRV 2356
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
+A G P V MT +P FV A++A+ M++GKFRHLPVV E G V +L I
Sbjct: 2357 VALGNDPFYVSVCDAMTPDPKFVDERDSAMDAMFMMLEGKFRHLPVVDETGMVAGMLRIQ 2416
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQW-----GSNFSAPYAFIETLRERMFKPSLS 221
KCLYDAI+R+EK Q S+ + + +E+Q G+ A + + E++ P++
Sbjct: 2417 KCLYDAITRIEKV--QQSSSGSLRQRLEKQLQATGIGTGQGALKQLVAPMVEKLLSPTVD 2474
Query: 222 TIITENAKVAIVSPSDPVAVAAKKMREFR-----------SNSALIVTGS---------- 260
I+ + +VS D V A++M R NS+ + G
Sbjct: 2475 QILEDETLPPLVSEHDTVMEVARQMAASRKAALIVEDPNADNSSSVSGGHRSSISGGGYD 2534
Query: 261 --------KIQGILTSKDVLMRVVAQNLSPELTLV 287
K+ G+ T KD+L+RV L T V
Sbjct: 2535 IGTSALTRKVLGVFTPKDLLLRVTGAGLDAAETTV 2569
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 14/250 (5%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V LR A+TI E V +A M +R DA+L+ D L+GI+TD DI RV+A
Sbjct: 1599 RPVSSLRPLPAITIDEVASVFEASLLMKQKRTDALLVVDEAGGLNGILTDTDICRRVLAL 1658
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
L P++ V +MTR+ +V+ + AI+AL M +G FRHLPVV+ G + +L+I KC+Y
Sbjct: 1659 NLNPEEVPVCNVMTRDIKYVSPNDSAIDALLSMQEGHFRHLPVVDGGSIAGVLNIGKCIY 1718
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
D R+E A + + A++E + S + + E++ P+L +II A+
Sbjct: 1719 DVSKRLEHATQSTDQLKASLEKSGKS-----STLQQLLAPMLEKLSTPTLGSIIESEAQN 1773
Query: 231 -AIVSPSDP----VAVAAKKMREFRSNSALIVTG---SKIQGILTSKDVLMRVVAQNLSP 282
+ +P P V+ AK M + +ALIV K+ G+ + ++++ V+A+ L
Sbjct: 1774 GSTPAPRLPKSSLVSDVAKAMASTK-KAALIVDDINFDKLVGVFSPNELVLNVIAKGLKA 1832
Query: 283 ELTLVERFIM 292
T VE ++
Sbjct: 1833 SATYVEEVML 1842
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 60/279 (21%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLS---------------------------- 95
+ E V + R+MA+ R A+++ D NA S
Sbjct: 2486 VSEHDTVMEVARQMAASRKAALIVEDPNADNSSSVSGGHRSSISGGGYDIGTSALTRKVL 2545
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G+ T KD+ RV GL +T V ++MT +P ++ ++AL M + F HLPVV
Sbjct: 2546 GVFTPKDLLLRVTGAGLDAAETTVGQVMTPDPETAPPNTRLVDALHIMYEHNFLHLPVVN 2605
Query: 156 N--GEVIAILDITKCLYDAISRMEKAAEQGSA------------IAAAVEGVERQWGSNF 201
N ++ +LD+ Y + AAE G ++ A+ E +
Sbjct: 2606 NETATIVGMLDVLSLCYGTFAS-GAAAESGKPVDEDSDWRAFWDVSLALGHDEDDFSELA 2664
Query: 202 SAPYAFIETLRERMFKPSLSTIITENA--------KVAIVSPSD--------PVAVAAKK 245
S + + R + S + + ++ V+++ P + VA AAK+
Sbjct: 2665 SVTGSRVSRRRPGKYTESHHSSMMDHIPEPEGAMRPVSMLRPQEVTRINEFITVAEAAKR 2724
Query: 246 MREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPE 283
MR+ R + ++ T +++GILT D+ RV+A+++ PE
Sbjct: 2725 MRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPE 2763
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 34/236 (14%)
Query: 70 VSDACRRMA-SRRVDAVLLTDANAL-LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V +A MA SRR V+ ++ A L GI T KD+ RV+AE L T VS +MT NP
Sbjct: 1440 VYEATTYMAESRRPALVVSSNPEAPDLIGIFTPKDVLLRVVAEDLDVHTTPVSDVMTPNP 1499
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
++ ++A M GKF +LPVV ++GE++ + D+ L +++ ++ + G
Sbjct: 1500 ESAAPETSVLDAFHIMHDGKFLNLPVVAPDSGEILGVADV---LSISLASFGESRDIGKL 1556
Query: 186 IAAAVEGVERQWG--------SNFS-APYAFIETLRER--------MFKPSLSTIITENA 228
AA + + + SN S A A + R++ +P + I E A
Sbjct: 1557 FNAAFDYHDDETNSIVSGRSTSNLSVASKARQQKDRDKGVNVRPVSSLRPLPAITIDEVA 1616
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVT-GSKIQGILTSKDVLMRVVAQNLSPE 283
V A+ M++ R+++ L+V + GILT D+ RV+A NL+PE
Sbjct: 1617 S---------VFEASLLMKQKRTDALLVVDEAGGLNGILTDTDICRRVLALNLNPE 1663
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDAN-ALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+P+ ++VSD + MAS + A+++ D N L G+ + ++ VIA+GL+ T V ++
Sbjct: 1781 LPKSSLVSDVAKAMASTKKAALIVDDINFDKLVGVFSPNELVLNVIAKGLKASATYVEEV 1840
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN--GEVIAILDITKCLYDAI 173
M +P T + ++ L M + +LPV+++ E++ ++D+ Y I
Sbjct: 1841 MLNDPEIATPSTSVLDGLHIMHDSRILNLPVLKDDSNELVGMVDVLDLSYGTI 1893
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + A + MA+ + A++L D L G+VT KD+ +++A+GL + T V ++MT +P
Sbjct: 2882 TTAARAAKLMANTKKAAIVLGDEQEL-CGMVTTKDLLRKLVAKGLYAETTTVEEVMTVDP 2940
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
+ D ++ L+ + +PV+ ++GE++ + D+ CL
Sbjct: 2941 DLMGPDMSIVDGLRSLHDAGQLFMPVLADDGEILGMADVI-CL 2982
>gi|397621002|gb|EJK66050.1| hypothetical protein THAOC_13058, partial [Thalassiosira oceanica]
Length = 1045
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 17/262 (6%)
Query: 41 SSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTD 100
S+++G ER V KLR K + I V + +AS+R DA ++TD+N L+GI+TD
Sbjct: 541 STNIGRKKDERPVSKLRPRKPVLIDNSASVLSVTKTLASKRGDAAIITDSNGGLAGIITD 600
Query: 101 KDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEV 159
D+T RV+A+ L T VS +MT NP V+ + A++AL MV+ +FRHLPV +NG V
Sbjct: 601 TDVTRRVVAKQLPAKSTNVSNVMTVNPTCVSMNHSAMDALVTMVENRFRHLPVTDDNGAV 660
Query: 160 IAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMF--- 216
+ +LDI KCL DAIS++E+A ++ + E +Q +N SA
Sbjct: 661 VGVLDIAKCLTDAISKLERAQDKS---GSGAEETAKQV-ANLSAGDHAAALQALLAPLLA 716
Query: 217 -------KPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSK 269
P+L +++ IVSP+ + M E R SALIV G+++ GI K
Sbjct: 717 QALGGNSSPTLRSVLAGKPST-IVSPNSTLQTVGLMMAEAR-KSALIVDGTQLVGIFGFK 774
Query: 270 DVLMRVVAQNLSPELTLVERFI 291
D++ RV+A+ L + T V + +
Sbjct: 775 DMMTRVIAEELPLDTTFVSQVM 796
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 13/249 (5%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V KLR + P V + +AS+R DA ++TD N L+GI+TD D+T RV+A+
Sbjct: 213 SVSKLRPKAPMVSPSTDTVLAVTQMLASKRGDAAIITDTNGGLAGIITDTDVTRRVVAKE 272
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
L P T VS +MT NP V+ S A +A+ M+ +FRHLPV ++ G V+ +LDI KCL
Sbjct: 273 LHPSTTHVSDVMTANPSCVSMSSSATDAMLTMIDNRFRHLPVTDDSGAVVGVLDIAKCLT 332
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIET----LRERMF----KPSLST 222
DAIS++E++ E+GS AA E ++ GS A A ++ L + F P+L +
Sbjct: 333 DAISKLERSQEKGS--NAAEEALKASLGSAGGAQAAALQQLLGPLLSQAFSGQSSPTLRS 390
Query: 223 IITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
++ IV P+ + M E R +AL+V ++ GI KD++ R +A+
Sbjct: 391 VLAGKPST-IVEPTTSIQATGCLMAEAR-KAALVVDKGRLVGIFGFKDMMTRAIAKEKPL 448
Query: 283 ELTLVERFI 291
E+T V + +
Sbjct: 449 EMTPVSQVM 457
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P +I + C +R+ A L+ D L+ GI KD+ TR IA+ + T VS++MT
Sbjct: 63 PTTSIQATGCLMAEARK--AALVVDKGRLV-GIFGFKDMMTRAIAKEKPLEMTPVSQVMT 119
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQG 183
NP V+ D+ +EALQ M +F LPV E NG V+ I+D+ C+Y AE
Sbjct: 120 PNPESVSPDTTVLEALQIMHDNRFLTLPVCESNGSVVGIVDVMDCVY-----ASGGAEGW 174
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAA 243
+I A+ + N + T+R P ++ K +VSPS +A
Sbjct: 175 KSIFASAIDCDDTASVNSFQSGSVQRTVRSSKSTPKDVSVSKLRPKAPMVSPSTDTVLAV 234
Query: 244 KKMREFRSNSALIVTGSK--IQGILTSKDVLMRVVAQNLSPELTLV 287
+M + A I+T + + GI+T DV RVVA+ L P T V
Sbjct: 235 TQMLASKRGDAAIITDTNGGLAGIITDTDVTRRVVAKELHPSTTHV 280
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA R A L+ D L+ GI KD+ TRVIAE L D T VS++MT NP V D+
Sbjct: 752 MAEARKSA-LIVDGTQLV-GIFGFKDMMTRVIAEELPLDTTFVSQVMTPNPESVLPDTTV 809
Query: 137 IEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
+EALQ M +F LPV ENG+V+ ++D+ C+Y
Sbjct: 810 LEALQLMHDNRFLTLPVCEENGQVVGLVDVMDCVY 844
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P +I + C +R+ A L+ D L+ GI KD+ TR IA+ + T VS++MT
Sbjct: 402 PTTSIQATGCLMAEARK--AALVVDKGRLV-GIFGFKDMMTRAIAKEKPLEMTPVSQVMT 458
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQG 183
NP V+ D+ +EALQ M +F LPV E NG V+ I+D+ C+Y
Sbjct: 459 PNPESVSPDTTVLEALQIMHDNRFLTLPVCESNGSVVGIVDVMDCVY------------- 505
Query: 184 SAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENA-------KVAIVSPS 236
+ EG W S F++ +T S + N V+ + P
Sbjct: 506 --ASGGAEG----WKSIFASALDCDDTADSASVYSHRSAAKSTNIGRKKDERPVSKLRPR 559
Query: 237 DPVAV--------AAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
PV + K + R ++A+I + + GI+T DV RVVA+ L + T V
Sbjct: 560 KPVLIDNSASVLSVTKTLASKRGDAAIITDSNGGLAGIITDTDVTRRVVAKQLPAKSTNV 619
Query: 288 ERFI 291
+
Sbjct: 620 SNVM 623
>gi|298714699|emb|CBJ27624.1| myosin 29 [Ectocarpus siliculosus]
Length = 3170
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 142/266 (53%), Gaps = 17/266 (6%)
Query: 39 ESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIV 98
++ +SV G + TV KLR A+T+PEG V++ C+ MA+ R DA LLT A ++GI+
Sbjct: 1480 QAPASVTKTGDDVTVSKLRPKPAVTVPEGMSVTEVCKVMANARNDAALLTGAGGGMTGII 1539
Query: 99 TDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV-VENG 157
T D RV+A + P+ T S++MT NP V S+ A+EAL M+ FRHLPV G
Sbjct: 1540 TAIDCIRRVVAVSVDPNSTAASEVMTPNPTTVLSEDSAMEALSIMLGRHFRHLPVRTPRG 1599
Query: 158 EVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNF-----SAPYAFIETLR 212
+V ILDI KCLYDA+SR+++ A++ S + + E + A ++ L
Sbjct: 1600 DVTGILDIAKCLYDAVSRLQRTAKRKSVDSGEADEAEMSMLAELGKGKGKKSKAAMQALL 1659
Query: 213 ERMFKP----------SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKI 262
+MF SL+ ++ + +V D A K + R + L+V +
Sbjct: 1660 AKMFADDPEGGTGVSLSLAELLKLKGEPQLVFADDSARGAGKAIARGR-KAVLVVDNGGL 1718
Query: 263 QGILTSKDVLMRVVAQNLSPELTLVE 288
GI T KD+L RV+++ ++P+ VE
Sbjct: 1719 AGIFTEKDMLNRVLSKGINPDEVSVE 1744
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 23/265 (8%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
SV R V L+ L + V+ +RMA R DA +L + G++TD D
Sbjct: 2246 SVKHEDHHRPVSSLKPKPPLCLSVDLTVAQVAKRMAEIRTDAAILLGQMGDMKGVLTDHD 2305
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
I +V+ L P +T VS +MT +PI+VT+ A++AL+ M++ RHLPVV E G V
Sbjct: 2306 IARKVVGRSLDPSRTPVSSVMTPDPIWVTTTDNAMDALETMLETHSRHLPVVSEEGAVSG 2365
Query: 162 ILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW-----------------GSN-FSA 203
+L+I KCLYDAI R+EK A + E+Q G N +A
Sbjct: 2366 MLNIAKCLYDAIRRLEKRALRAEEEGGGGLSGEKQELAASLIKMHSMKAGKKNGKNTLAA 2425
Query: 204 PYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSA-LIVTGSKI 262
++ L + P+L I++E D VA K + RS A L++ ++
Sbjct: 2426 MTMLLQGLSDGEEDPTLEDILSEQTG-EFAEEGDSVAACGKAIS--RSKKAVLVLRNGRL 2482
Query: 263 QGILTSKDVLMRVVAQNLSPELTLV 287
GI+T KD+LMRVVA+ L P+ T V
Sbjct: 2483 AGIVTPKDLLMRVVAKGLDPDATPV 2507
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 23/258 (8%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V L+ L +P V + ++MA R DA +L D L GI++D+D+ RV+A
Sbjct: 1875 RPVSMLKPKPPLCLPSTVSVLEVAKKMADVRTDAAILLDNKGHLEGIISDQDVARRVVAN 1934
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCL 169
L P T VS++MT +P V A+E L M++ +FRHLPV++ G V +L I KCL
Sbjct: 1935 RLDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCL 1994
Query: 170 YDAISRMEKAAEQG-----------SAIAAAV---------EGVERQWGSNFSAPYAFIE 209
YDAI R++K A + + +AA+V +G + +
Sbjct: 1995 YDAIQRLKKKAARAENSGGGGGGGNANLAASVLQMANAGKGKGKNKTRDLQAALAMLLAN 2054
Query: 210 TLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSK 269
+ E SL I++E + V D + AA + + R + L++ ++ GILT K
Sbjct: 2055 SSDEAEANHSLREILSEQT-TSFVDGRDSITAAAAAIAKGR-KAVLVLDQGRLAGILTPK 2112
Query: 270 DVLMRVVAQNLSPELTLV 287
DVLMRVVA+ L P+ T V
Sbjct: 2113 DVLMRVVAKELDPDRTPV 2130
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 120/238 (50%), Gaps = 29/238 (12%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M+ +R DA LLT ++ GIVTD D+T RVIA + PD+T V IMT P V+ D A
Sbjct: 2645 MSLKRTDAALLTKRGRVV-GIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESA 2703
Query: 137 IEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAA-----EQGSAIAAAV 190
+EAL M+Q K RHLPV++ G++ +LDI KCLYDA+SR+E AA E+G
Sbjct: 2704 MEALGLMIQNKTRHLPVMDAQGKIGGLLDIAKCLYDAVSRLEHAAKKKALEEGDGDGEVG 2763
Query: 191 EGVERQWGSNFSAPYAF--------IETLRERMF-------------KPSLSTIITENAK 229
G G+ A A + L+E M +L+ ++ K
Sbjct: 2764 SGSTVMIGAVMEAAKAMKGKASPKNQQALQELMMLAMTGSETEREGTNQTLADVLASKDK 2823
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V P V AA + + + L+V ++ GI T KD++ RV+ + L+P T V
Sbjct: 2824 PEFVRPRHTVREAASVIAS-QKKAVLVVEEGELAGIFTPKDMMNRVITKKLNPGTTAV 2880
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 26/244 (10%)
Query: 66 EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
EG V+ AC + SR AVL+ N L+GIVT KD+ RV+A+GL PD T VS +MT
Sbjct: 2456 EGDSVA-ACGKAISRSKKAVLVL-RNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTP 2513
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAISRMEKAAEQG 183
NP V IEAL++M + K+ HLPVV ++G V+ ++ + + ++ A ++G
Sbjct: 2514 NPDAVPPAMTVIEALREMHENKYLHLPVVDEDSGNVLGVVSVMEIIH------ATAGDKG 2567
Query: 184 SAIAAAVEGVERQWGSNFS---APYAFIETLRERMFKPSLSTIIT----ENAKVAIVSPS 236
S A G + S + ++ E + R KP T N KV+ + P
Sbjct: 2568 SDRWEAFFGDAMDAADDVSDSASMFSAEEKMSMRSAKPGAKTGAPAPPRSNKKVSCLKPK 2627
Query: 237 DPVAVA--------AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
PV ++ A +M R+++AL+ ++ GI+T D+ RV+A ++ P+ T V
Sbjct: 2628 RPVIMSSDGSVLEVATEMSLKRTDAALLTKRGRVVGIVTDHDLTRRVIALDMPPDRTPV- 2686
Query: 289 RFIM 292
R IM
Sbjct: 2687 RDIM 2690
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 128/258 (49%), Gaps = 36/258 (13%)
Query: 65 PEGTIVSDACR---RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
P+ D+ R + +R AVL+ D N L+GI T+KD+ RV+++G+ PD+ V
Sbjct: 1687 PQLVFADDSARGAGKAIARGRKAVLVVD-NGGLAGIFTEKDMLNRVLSKGINPDEVSVED 1745
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCLYDAISRMEKA 179
+MT NP V+S +EALQ+M + K+ HLPVV ++G V+ ++ + + +
Sbjct: 1746 VMTPNPDTVSSTMTVLEALQEMHENKYLHLPVVDEDSGNVLGVVSVMEIIQATAGEEGST 1805
Query: 180 AEQ---GSAIAAAVEGV-----ERQWGSNFSAPYAFIETLRERM-----FKPSLSTII-- 224
Q GS + A +G + GS + A + R + PS ++ +
Sbjct: 1806 GWQALFGSGLDATGDGFSDTSSQASMGSIGTRASARVGVGRGKTSPRVAMTPSAASSVRG 1865
Query: 225 ------TENAKVAIVSPSDPVAV--------AAKKMREFRSNSALIVTG-SKIQGILTSK 269
T++ V+++ P P+ + AKKM + R+++A+++ ++GI++ +
Sbjct: 1866 KEPPKKTDSRPVSMLKPKPPLCLPSTVSVLEVAKKMADVRTDAAILLDNKGHLEGIISDQ 1925
Query: 270 DVLMRVVAQNLSPELTLV 287
DV RVVA L P T V
Sbjct: 1926 DVARRVVANRLDPSSTTV 1943
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 41/236 (17%)
Query: 84 AVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKM 143
AVL+ D L+GI+T KD+ RV+A+ L PD+T VS IMT NP V + A+EAL +M
Sbjct: 2096 AVLVLD-QGRLAGILTPKDVLMRVVAKELDPDRTPVSSIMTPNPDTVPPEMTAVEALGEM 2154
Query: 144 VQGKFRHLPVVENGEVIAILDITKCLYDAISRME----KAAEQGSAIAAAVEGVERQWGS 199
+ K+ HLPVV+ LD+ + ++ ME A ++GS+ A+ G G
Sbjct: 2155 HENKYLHLPVVD-------LDVGTVVG-VVNVMEILRATAGDKGSSSWEALFGSAMDAGD 2206
Query: 200 NFSAPYAFIETLRERMFK-----PSL------------STIITENAK--VAIVSPSDP-- 238
+ S + R M P L ++ E+ V+ + P P
Sbjct: 2207 DVSDSASMYSMDRSVMSARQRGGPGLPRAAAAGSVAAAESVKHEDHHRPVSSLKPKPPLC 2266
Query: 239 ------VAVAAKKMREFRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSPELTLV 287
VA AK+M E R+++A+++ ++G+LT D+ +VV ++L P T V
Sbjct: 2267 LSVDLTVAQVAKRMAEIRTDAAILLGQMGDMKGVLTDHDIARKVVGRSLDPSRTPV 2322
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L+GI T KD+ RVI + L P T V +MT NP +EALQ+M + ++ HLPV
Sbjct: 2855 LAGIFTPKDMMNRVITKKLNPGTTAVFSVMTPNPDGADPSMTVVEALQQMCENRYLHLPV 2914
Query: 154 VE--NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETL 211
V+ +G V+ ++D+ + + + ++GS+ G E +GS A +T+
Sbjct: 2915 VDERSGAVLGVVDVMEIVQATV------GQEGSS------GWEAFFGSAMDAADDMSDTM 2962
Query: 212 RE 213
E
Sbjct: 2963 SE 2964
>gi|406602467|emb|CCH46008.1| Inosine-5'-monophosphate dehydrogenase [Wickerhamomyces ciferrii]
Length = 641
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 136/238 (57%), Gaps = 7/238 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V L+ S+A+ +A + M+++R + +L+ D + L GI T KD+ RV+++G
Sbjct: 84 SVLSLKPSEAVVCKPSFTAYEAAQLMSAKRENCILVIDDDERLLGIFTAKDLAFRVVSKG 143
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L+ + +IMT NP+ TS++ A EAL MV+ FRHLPV+ EN + +LDITKC
Sbjct: 144 LKAGSVTIDQIMTENPLCATSNTPASEALNLMVERGFRHLPVLDENNFIYGVLDITKCYQ 203
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYA---FIETLRERMFKPSLSTIITEN 227
+A+ ++E+ E + A++GV+ + GS P + E L+ M P+L +++ EN
Sbjct: 204 EAMEKLERMYESSKKLHDALQGVQLEIGSQ-QQPLQVIRYFENLKSVMNGPTLESVLDEN 262
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALI--VTGSKIQGILTSKDVLMRVVAQNLSPE 283
+ + V+ V AA M+E + + L+ + GI TSKDV++RV+A L P+
Sbjct: 263 SLPSYVNVKTSVYDAAVLMKENHTTAVLVKDSNNEDVSGIFTSKDVVLRVIAAGLDPK 320
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANAL-LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T V DA M AVL+ D+N +SGI T KD+ RVIA GL P V ++MT
Sbjct: 272 TSVYDAAVLMKENHTTAVLVKDSNNEDVSGIFTSKDVVLRVIAAGLDPKTVSVIRVMTSQ 331
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY---DAISRMEKAAEQG 183
P + +AL+KM G + +LP+VE+ E+I I+++ K Y + IS M G
Sbjct: 332 PDVAPKNLTIQQALRKMFDGHYLNLPIVEDDEIIGIVEVLKLTYATLNQISLMNSNESNG 391
Query: 184 SAIAAAVEGVERQWGS 199
+ + W S
Sbjct: 392 NGEEQEGPAWNKFWTS 407
>gi|325182347|emb|CCA16800.1| myosinlike protein putative [Albugo laibachii Nc14]
Length = 2641
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 145/238 (60%), Gaps = 12/238 (5%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
++TV LR SK++T+ E V++ ++ RR D+ L+ + +L GIVTD DI RV+
Sbjct: 1764 DQTVANLRPSKSVTVTETLTVTELAAILSQRRSDSALVISEDGVLQGIVTDTDIAYRVVG 1823
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKC 168
G P++T+VS+IMT P FV + A++A+ M+QG+FRHLPV+ + G V IL I KC
Sbjct: 1824 VGNDPNRTIVSEIMTPKPEFVFAKDRALDAMFAMLQGRFRHLPVINDRGVVDGILRIQKC 1883
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIIT-EN 227
L DAI R+E + +A V +Q S+ + P A +ETL +++F PSL+ ++ +
Sbjct: 1884 LDDAIQRLEGMQKASGEMA---HSVTKQPKSDTARPRA-VETLLDKLFSPSLAALLERQK 1939
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-----KIQGILTSKDVLMRVVAQNL 280
+V IVS D ++VA +M + +AL+V S KI G+LT D+L+RV+A L
Sbjct: 1940 HEVLIVSKHDTISVAVGQMMRVK-GAALVVDRSQVEEPKIVGLLTPNDLLLRVIANKL 1996
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 133/244 (54%), Gaps = 20/244 (8%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V L K + + + V++A + M R +A+ +T + + GI+TD DI RVIA
Sbjct: 2138 RPVSMLHPRKVMCLHVTSTVAEAAKLMRQARAEAIAVTSRDGEIQGILTDTDIARRVIAR 2197
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
L P++ ++ +MT P V + AIEA+ +M++G+F+HLPV+ ++G++ +LDI+KCL
Sbjct: 2198 DLDPNKCLIESVMTSRPCCVHVNDSAIEAITRMLEGQFKHLPVIGQDGKISGMLDISKCL 2257
Query: 170 YDAISRMEKAAE-----QGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
DA+ MEK + S+ + + V FS+ ++ I+ P++ +
Sbjct: 2258 VDAVECMEKVHQANLKHDSSSTTSLISRV-------FSSSHSKIKY-------PTVLEAL 2303
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
+K I+ + V A+K M E + + ++ + +I G+LT KD+L ++VA+ L +
Sbjct: 2304 ENESKPPIIPCTMSVLKASKLMVEHKKAAIIVDSEDRIVGMLTPKDILRKLVAKGLKAKS 2363
Query: 285 TLVE 288
T V
Sbjct: 2364 TSVH 2367
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 131/253 (51%), Gaps = 21/253 (8%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA-LLS 95
+G+ S S A T+ +L L +TI + +S+AC M R +AVL+ D+++
Sbjct: 788 EGKESFSDVPAECNSTIAQLCLPTPVTISSNSSISEACELMTRMRCEAVLVLDSSSKRFC 847
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G++TD+D+ R+IA T ++KI+ P+ T + +E M + H+PV++
Sbjct: 848 GMITDEDVADRLIAHEWEA-TTPLAKIVEMCPVVHTHQDV-VEVFDLMQKEGVHHVPVLQ 905
Query: 156 NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERM 215
N +V ++ ++ L+D + RM+ + A+ +G++ Y+F+E +
Sbjct: 906 NNQVHGVVTVSHYLHDTLERMKTWTQ---ALQEESDGMDL-------TLYSFLENIA--- 952
Query: 216 FKPSLSTIITE----NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDV 271
PSL +I + +V ++ VA KMR++R + ++ S++ GI T+KD+
Sbjct: 953 -TPSLDDLIQSGVWAQKRPLLVERNENVASVTSKMRKYRQIALVMDADSQLCGIFTTKDL 1011
Query: 272 LMRVVAQNLSPEL 284
+ RV+A+ +P+L
Sbjct: 1012 IHRVLAKRRNPQL 1024
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 17/229 (7%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV +LR +KA+ I G + + V++ + L G+VT+ D+ R++ E
Sbjct: 1436 TVAELRPAKAICIDVGAKLLQLVSLFHQSQSPCVIVCEKEDL-CGVVTETDVANRMVGER 1494
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN--GEVIAILDITKCL 169
+VS+IMT+ PI+V+S S A +AL M++ + HLPV ++ ++ +L C+
Sbjct: 1495 RDLQIALVSEIMTKKPIWVSSQSSATDALNLMLEHRVHHLPVKDSITKQITGVLHFQSCV 1554
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITE--N 227
+AI +E A + + +E +P + T+ ++ F S+ ++++ N
Sbjct: 1555 LEAIQLLESAKSSFVHLPSELEMS--------VSPKSARRTM-DQTFGSSVGYVLSQHKN 1605
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVT-GSKIQGILTSKDVLMRV 275
VA+V P VA K+M S +ALI+ GI T K +L V
Sbjct: 1606 EVVALVGPQVCVADVCKRMAT--SGAALIIDPNGTCLGICTPKLLLQYV 1652
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 86 LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
L+ DA++ L GI T KD+ RV+A+ P V ++MT +P V+ A +AL+ M +
Sbjct: 994 LVMDADSQLCGIFTTKDLIHRVLAKRRNPQLISVMEVMTPHPERVSPLQNAFDALRMMHE 1053
Query: 146 GKFRHLPVVENGEVIAILDI 165
+F HLP+++N ++I I+D+
Sbjct: 1054 ERFLHLPMIQNDQIIGIVDV 1073
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
SK IP V A + M + A ++ D+ + G++T KDI +++A+GL+ T
Sbjct: 2307 SKPPIIPCTMSVLKASKLMVEHK-KAAIIVDSEDRIVGMLTPKDILRKLVAKGLKAKSTS 2365
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG--EVIAILDI 165
V +MT++P F+ + +++L++M +PV+ +G +VI ++D+
Sbjct: 2366 VHMVMTKDPDFILPSATILDSLRRMYDAGQLFMPVLGSGTKDVIGMVDV 2414
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 46/249 (18%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
AL P+ V+D C+RMA+ A L+ D N GI T K + V G T ++
Sbjct: 1609 ALVGPQ-VCVADVCKRMATS--GAALIIDPNGTCLGICTPKLLLQYVRTLGHSLKTTAIA 1665
Query: 121 KIMTRNPIFVTS---DSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
+M PI S D+ ++A++ M LPVV++ E+ L + ++++S
Sbjct: 1666 DVM--EPIHSASLQPDATVLDAMKLMRDRNVSALPVVQSTEIARPLGVVT--FESLS--- 1718
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSD 237
G++ W + ++A + + + R+ + S + T I +PSD
Sbjct: 1719 -------------GGIDCDWRAFWNASFDIADRQKRRIRQIPASNLDTRRQSDRI-TPSD 1764
Query: 238 PVAV------------------AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQ 278
A + + RS+SAL+++ + QGI+T D+ RVV
Sbjct: 1765 QTVANLRPSKSVTVTETLTVTELAAILSQRRSDSALVISEDGVLQGIVTDTDIAYRVVGV 1824
Query: 279 NLSPELTLV 287
P T+V
Sbjct: 1825 GNDPNRTIV 1833
>gi|254565947|ref|XP_002490084.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029880|emb|CAY67803.1| Hypothetical protein PAS_chr1-1_0425 [Komagataella pastoris GS115]
gi|328350486|emb|CCA36886.1| Meiotically up-regulated gene 70 protein [Komagataella pastoris CBS
7435]
Length = 625
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 134/239 (56%), Gaps = 9/239 (3%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+ + V +A + M ++ + +L+ D N LSGI T KD+ R++ G
Sbjct: 86 TVMALKPSEPIICKPNYTVHEAAQLMGFKKENCILVVDENDELSGIFTAKDLAFRIVGSG 145
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
LR + T V IMT +P+ + + A EAL MV FRHLP+V++ +++ ILDITKC
Sbjct: 146 LRANSTTVDAIMTPSPLCCKTTTKASEALNLMVTKGFRHLPIVDDTNQIVGILDITKCYN 205
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY---AFIETLRERMFKPSLSTIITEN 227
+A+S++E+ E + A+EGV + + P + E L+ + P+LST++ +
Sbjct: 206 EAMSKLERMYESSKKLYDALEGVNSELQA--QQPLEVIQYFENLKRMIDGPNLSTVLDDT 263
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV---TGSKIQGILTSKDVLMRVVAQNLSPE 283
V V AA MR+ R+ + L+ +++ GI TSKDV++RV+A +L+P+
Sbjct: 264 TLPVYVDVKSTVQEAASLMRDNRTTAVLVQDSNNDNEVTGIFTSKDVVLRVIAADLNPK 322
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 70 VSDACRRMASRRVDAVLLTDANA--LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V +A M R AVL+ D+N ++GI T KD+ RVIA L P V ++MT P
Sbjct: 275 VQEAASLMRDNRTTAVLVQDSNNDNEVTGIFTSKDVVLRVIAADLNPKNCSVIRVMTPKP 334
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVE--NGEVIAILDITKCLYDAISRMEKAAEQGSA 185
+ TS+ EAL+KM +G++ +LP+++ + E+I I+++ K + +S++ K +
Sbjct: 335 DYATSELSVHEALRKMFEGRYLNLPIIDPLSTEIIGIVEVLKLTHVTLSQI-KTMQTQIG 393
Query: 186 IAAAVEGVERQWGSNFSAP 204
+++VE V+ S F +P
Sbjct: 394 TSSSVETVK----SGFDSP 408
>gi|422295637|gb|EKU22936.1| hypothetical protein NGA_2021300 [Nannochloropsis gaditana CCMP526]
Length = 549
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 9/225 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V++ + M +R DA L+T + GI+TD D+T RVIA+ +T +S IMT NP
Sbjct: 9 VTEVVKAMVHKRTDAALVTSRTGKVLGILTDNDVTRRVIAQYRAETETPISTIMTENPKS 68
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
V+ DS +I+AL MV+G+FRHLPV+ +G+V+ +LDI KCL DAI+R+E+ E+ ++ A
Sbjct: 69 VSQDSDSIDALTTMVKGRFRHLPVMGPHGQVVGLLDIAKCLSDAITRLERREEKTASSLA 128
Query: 189 AVEGVERQWGSNFSAPYAFIETLRE-----RMFKPSLSTII-TENAKVAIVSPSDPVAVA 242
A Q G A ++ L+E R PSL ++ + A IV + V A
Sbjct: 129 AASAGVAQGG--HGALMHLMQLLQEQSEPGRDCNPSLRALLGQQGAPTNIVRATVNVRTA 186
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
A+ M + R ++ + GI T KD+L RVV+Q LSP+ T V
Sbjct: 187 AEVMSKCRKAVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAV 231
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 74 CRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSD 133
CR+ AVL+ D + L GI T KD+ RV+++ L PD T VS +MT P + ++
Sbjct: 193 CRK-------AVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPDTIEAE 245
Query: 134 SLAIEALQKMVQGKFRHLPVVE--NGEVIAILDITKCLYDAISR 175
+ +EAL M + + HLPV + +G V+ ++D+ + ++ R
Sbjct: 246 ATVLEALYMMRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGR 289
>gi|328767299|gb|EGF77349.1| hypothetical protein BATDEDRAFT_36036 [Batrachochytrium
dendrobatidis JAM81]
Length = 712
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 142/269 (52%), Gaps = 33/269 (12%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR + A+ I E + A + MA++R DAVL+ + L+GI+TDKDI RV+AEG
Sbjct: 79 TVSSLRPAPAIIIIETARIIQAAQLMAAKRTDAVLVVGEDGALAGILTDKDIAYRVVAEG 138
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENG------------- 157
L T VS +MTR+PI V EAL MV +FRHLPV+ E G
Sbjct: 139 LDIRTTPVSSVMTRDPIAVYDKGSRNEALNIMVSRRFRHLPVISETGGGNDDDDNEFDEA 198
Query: 158 ----EVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRE 213
V+ +LDITKC+++ I +E+ + I +A+E +ER+ + + +R+
Sbjct: 199 AGGTSVVGLLDITKCVFERIDDLERKVNEDLNIISAMEALERRG----TVAAEHVGVVRQ 254
Query: 214 RMFKPSLSTIIT-------ENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS----KI 262
P + ++T E+ V VS V AA+ M+ + + + L++ S +I
Sbjct: 255 HHGCPDVGFVLTQTIGGQLEHGTVPEVSIKSSVRDAARIMKAYHTTAVLVIGNSNDDEQI 314
Query: 263 QGILTSKDVLMRVVAQNLSPELTLVERFI 291
GI T+KD+++RV+A +L P T V R +
Sbjct: 315 GGIFTTKDIVLRVIAASLDPMTTSVVRVM 343
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 63 TIPEGTI---VSDACRRMASRRVDAVLL---TDANALLSGIVTDKDITTRVIAEGLRPDQ 116
T+PE +I V DA R M + AVL+ ++ + + GI T KDI RVIA L P
Sbjct: 277 TVPEVSIKSSVRDAARIMKAYHTTAVLVIGNSNDDEQIGGIFTTKDIVLRVIAASLDPMT 336
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T V ++MT +P +V + + ++AL+K+ G + HLPVV+ G I ++D+ ++ +
Sbjct: 337 TSVVRVMTPHPDYVLASTSILDALKKLNTGHYLHLPVVDGGVPIGLVDVMTLTISMLTYL 396
Query: 177 --EKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLS 221
+ Q +I+ + W S F+ + IET +R+ + S S
Sbjct: 397 MTKDLGTQEGSISEDGPLWNKFWNSTFAG--STIETESDRLSQTSDS 441
>gi|328768526|gb|EGF78572.1| hypothetical protein BATDEDRAFT_12894, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 331
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 59/299 (19%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L S AL + E V A MA++R DAVL+ D + L+GI+TDKD+ RVIA
Sbjct: 12 TVDSLAPSAALPLNENVNVLQAASYMAAKRQDAVLVVDNDGELTGILTDKDLAYRVIASR 71
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG-------------- 157
L P T + +MT+NP+ V D+ A +AL KMV G FRHLPVV++G
Sbjct: 72 LNPKTTPIVAVMTKNPVSVGPDTTASDALNKMVAGHFRHLPVVDDGINDLDDQLTNLESL 131
Query: 158 ------------------EVIAILDITKCLYDAISRMEKAAE---------QGSAIAAAV 190
AILDITKCLY+A+ ++E+A + +A+ +
Sbjct: 132 RSADILRSVCTDSGDFPTTTFAILDITKCLYEALEKLERAFDPHLPADIINHPNALDSFQ 191
Query: 191 EGVERQWGSNFSAP-------YAFIETLRERMFKPSLSTIITENA--KVAIVSPSDPVAV 241
+++ + P F ++ ++ P+L +++ ++A ++S + V
Sbjct: 192 LSIQQPDKHIITDPDLETTPLIQFTRNIQTQLACPTLESVLPKDAPSSTPMLSKNCSVLD 251
Query: 242 AAKKMREFRSNSAL---------IVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A KM++ + L +V S + GI T+KD+++RV+A L+PE T + R +
Sbjct: 252 AVVKMQQTHETAVLAFEPLPNQPMVASSLLAGIFTTKDLVLRVLAAGLNPEKTAISRVM 310
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 90 ANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKM 143
A++LL+GI T KD+ RV+A GL P++T +S++MT +P V D+ I+AL+KM
Sbjct: 277 ASSLLAGIFTTKDLVLRVLAAGLNPEKTAISRVMTPHPDCVGLDTTVIDALRKM 330
>gi|387219401|gb|AFJ69409.1| hypothetical protein NGATSA_2021300 [Nannochloropsis gaditana
CCMP526]
Length = 534
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 125/218 (57%), Gaps = 9/218 (4%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M +R DA L+T + GI+TD D+T RVIA+ +T +S IMT NP V+ DS +
Sbjct: 1 MVHKRTDAALVTSRTGKVLGILTDNDVTRRVIAQYRAETETPISTIMTENPKSVSQDSDS 60
Query: 137 IEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVER 195
I+AL MV+G+FRHLPV+ +G+V+ +LDI KCL DAI+R+E+ E+ ++ AA
Sbjct: 61 IDALTTMVKGRFRHLPVMGPHGQVVGLLDIAKCLSDAITRLERREEKTASSLAAASAGVA 120
Query: 196 QWGSNFSAPYAFIETLRE-----RMFKPSLSTII-TENAKVAIVSPSDPVAVAAKKMREF 249
Q G A ++ L+E R PSL ++ + A IV + V AA+ M +
Sbjct: 121 QGG--HGALMHLMQLLQEQSEPGRDCNPSLRALLGQQGAPTNIVRATVNVRTAAEVMSKC 178
Query: 250 RSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
R ++ + GI T KD+L RVV+Q LSP+ T V
Sbjct: 179 RKAVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAV 216
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 74 CRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSD 133
CR+ AVL+ D + L GI T KD+ RV+++ L PD T VS +MT P + ++
Sbjct: 178 CRK-------AVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPDTIEAE 230
Query: 134 SLAIEALQKMVQGKFRHLPVVE--NGEVIAILDITKCLYDAISR 175
+ +EAL M + + HLPV + +G V+ ++D+ + ++ R
Sbjct: 231 ATVLEALYMMRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGR 274
>gi|354548364|emb|CCE45100.1| hypothetical protein CPAR2_701040 [Candida parapsilosis]
Length = 619
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 128/244 (52%), Gaps = 4/244 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S + V + + M + R + VL+ + L GI T KD+ R++ G
Sbjct: 66 TVLSLKPSDPIICKTTATVHEVSQMMTATRENCVLVVNDIGELLGIFTAKDLAFRIVGSG 125
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
L + + +IMT +PI +++ A EAL MV+ FRHLPV++N +++ +LDITKC
Sbjct: 126 LTANSVTIDQIMTADPICANANNPASEALNLMVERGFRHLPVLDNDNQIVGVLDITKCYA 185
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTIITENA 228
+ ++E+ Q + A V + G P+ F ETL+ +M P+L ++ E
Sbjct: 186 QQMEKLERMHAQSKTLYEAWTSVHNEIGVQDQPPHVFQYFETLKNKMNGPTLDNVLDETT 245
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V A M+E ++ + L+ T ++ GI TSKDV++RV+A L P+ V
Sbjct: 246 EPIYVSVKTSVYEATVLMKENKTTAVLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSV 305
Query: 288 ERFI 291
R +
Sbjct: 306 VRVM 309
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M + AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 254 TSVYEATVLMKENKTTAVLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSVVRVMTSHP 313
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRMEK--AAEQGS 184
++ EAL+KM G + +LPVV E +I ++D+ K Y ++++++ A + S
Sbjct: 314 DVAYANLPIQEALRKMFDGHYLNLPVVNTDEDIIGMVDVLKLTYATLTQIKQLEAKDLPS 373
Query: 185 AIAAAVEGVE 194
++ A +G E
Sbjct: 374 SLDAPEQGSE 383
>gi|387219477|gb|AFJ69447.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 23/255 (9%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V KLR K L + T V+ + M RR AVLLT + LSGI+TD D+T RV+++
Sbjct: 1 RPVSKLRPDKPLVLAATTSVAAVAQVMVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSK 60
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCL 169
L ++T +MT NP VT + ++AL MV+G FRHLPV+++G+ V+ LDI KCL
Sbjct: 61 ELSVEETTAEDVMTANPTTVTLEDDCLDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCL 120
Query: 170 YDAISRMEKAAEQ-----GSAIAAAVEGVERQW-----GSNFSAPYAFIETLRERMFK-- 217
DAI+R+EK E G+ +E G A + TL + +
Sbjct: 121 NDAITRLEKMEEHREKQLGNGTNKQLEAAAMAMALAGRGGGGKHQTALVSTLMQLLSSSG 180
Query: 218 ----------PSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILT 267
PS+ ++++ + A++S V A+++M R ++ ++ G++T
Sbjct: 181 GNGEDGGSKLPSVGSMLSGASSTALLSKEASVLEASREMAASRKACLVVGENGELIGLVT 240
Query: 268 SKDVLMRVVAQNLSP 282
KDVL RVVA+ LSP
Sbjct: 241 FKDVLGRVVAKGLSP 255
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S AL E +++ +A R MA+ R A L+ N L G+VT KD+ RV+A+GL P +
Sbjct: 202 STALLSKEASVL-EASREMAASR-KACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAI 259
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
+ ++MT P VT D ++AL M G F +LPVV E+G + +L
Sbjct: 260 LGEVMTPKPASVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLL 305
>gi|224003559|ref|XP_002291451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973227|gb|EED91558.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 298
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 125/222 (56%), Gaps = 11/222 (4%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
+ +AS+R DA ++TD + ++GI+TD D+T RV+A+ L P T +S +MT NP V+
Sbjct: 25 QMLASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSATPISDVMTANPTCVSMTD 84
Query: 135 LAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIA----AA 189
A EAL MV+ +FRHLPV +NG V+ +LDI KCL DAIS++E + ++GS+ A
Sbjct: 85 SATEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAISKLEHSKDKGSSAAEDAVKQ 144
Query: 190 VEGVERQWGSNFSAPYAFIETLRERMF----KPSLSTIITENAKVAIVSPSDPVAVAAKK 245
+ ++ G +A + L + F P+L I+ +V PS + +
Sbjct: 145 MANLQGAGGVQAAALQQLLGPLLSQAFGGQTSPTLRAILAGKPST-MVGPSSSLQEVGEL 203
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
M E R +ALIV + GI KD++ R +A+ L +LT V
Sbjct: 204 MAEAR-KAALIVENGNLIGIFGFKDMMSRAIAKQLRLDLTSV 244
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA R A+++ + N L GI KD+ +R IA+ LR D T VS +MT NP V+ D+
Sbjct: 204 MAEARKAALIVENGN--LIGIFGFKDMMSRAIAKQLRLDLTSVSTVMTPNPESVSPDTTV 261
Query: 137 IEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+EALQ M KF LPV E NG VI ++D+ C+Y
Sbjct: 262 LEALQIMHDNKFLTLPVCEANGSVIGVVDVMDCVY 296
>gi|422293264|gb|EKU20564.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 133/255 (52%), Gaps = 23/255 (9%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V KLR K L + T V+ + M RR AVLLT + LSGI+TD D+T RV+++
Sbjct: 1 RPVSKLRPDKPLVLAATTSVAAVAQVMVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSK 60
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCL 169
L + T +MT NP VT + ++AL MV+G FRHLPV+++G+ V+ LDI KCL
Sbjct: 61 ELSVEGTTAEDVMTANPTTVTLEDDCLDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCL 120
Query: 170 YDAISRMEKAAEQ-----GSAIAAAVEGVERQW-----GSNFSAPYAFIETLRERMFK-- 217
DAI+R+EK E G+ +E G A + TL + +
Sbjct: 121 NDAITRLEKMEEHREKQLGNGTNKQLEAAAMAMALAGRGGGGKHQTALVSTLMQLLSSSG 180
Query: 218 ----------PSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILT 267
PS+ ++++ + A++S V A+++M R ++ ++ G++T
Sbjct: 181 GNGEDGGSKLPSVGSMLSGASSTALLSKEASVLEASREMAASRKACLVVGENGELIGLVT 240
Query: 268 SKDVLMRVVAQNLSP 282
KDVL RVVA+ LSP
Sbjct: 241 FKDVLGRVVAKGLSP 255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S AL E +++ +A R MA+ R A L+ N L G+VT KD+ RV+A+GL P +
Sbjct: 202 STALLSKEASVL-EASREMAASR-KACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAI 259
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
+ ++MT P VT D ++AL M G F +LPVV E+G + +L
Sbjct: 260 LGEVMTPKPGSVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLL 305
>gi|224003561|ref|XP_002291452.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
CCMP1335]
gi|220973228|gb|EED91559.1| hypothetical protein THAPSDRAFT_262854, partial [Thalassiosira
pseudonana CCMP1335]
Length = 279
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 125/228 (54%), Gaps = 22/228 (9%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+ ++R DA ++TD L+GI+TD DIT RV+A+ L P T VS MT NP V A
Sbjct: 8 LTNKRGDAAIITDERGGLAGIITDTDITRRVVAKHLSPSSTCVSDAMTSNPTCVAMSDPA 67
Query: 137 IEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVER 195
EAL MV+ +FRHLPV +NG V+ +LDI KCL DAI+++E++ E + +A E +
Sbjct: 68 TEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAITKLERSKENSN---SAAEDAVK 124
Query: 196 QWGS---------------NFSAPYAFIETLRERMFKPSLSTIITE-NAKVAIVSPSDPV 239
Q S +F++ + +++ + L+ +++ K ++S SD
Sbjct: 125 QMASLQGAGGAQAAALQQFSFTSAHKSVKSFKSGKNSVKLADPVSKLRPKAPMISHSDDT 184
Query: 240 AVAAKKMREFRSNSALIVTGSK--IQGILTSKDVLMRVVAQNLSPELT 285
+A ++ + A I+T + + GI+T DV RVVA+NLSP T
Sbjct: 185 VLAVVQLLANKRGDAAIITDNNGGMAGIITDTDVTRRVVAKNLSPSTT 232
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+A++R DA ++TD N ++GI+TD D+T RV+A+ L P T +S +MT NP V+ A
Sbjct: 192 LANKRGDAAIITDNNGGMAGIITDTDVTRRVVAKNLSPSTTSISDVMTANPTCVSMSDPA 251
Query: 137 IEALQKMVQGKFRHLPVV-ENGEVIAIL 163
EAL MV+ +FRHLPV +NG V+ +L
Sbjct: 252 TEALVTMVENRFRHLPVTDDNGAVVGVL 279
>gi|260943069|ref|XP_002615833.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
gi|238851123|gb|EEQ40587.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
Length = 627
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 149/291 (51%), Gaps = 10/291 (3%)
Query: 5 GGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTI 64
G SR+ Q + +R E LSK +S G TV L+ S+A+
Sbjct: 53 GDSRKRQSKKDEAIRRKIEYE----LSKKRGQSSRTSRKNKAVPG--TVSYLKPSEAIIC 106
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
+ V A + M++RR + +L+ + + L GI T KD+ RV+ GL + T++ +IMT
Sbjct: 107 KKNATVYQAAQLMSARRENCILVVNDDGELIGIFTAKDLAFRVVGSGLNANATLIEQIMT 166
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQG 183
+PI +DS A EAL MV+ FRHLPV+++ ++ +LDITK + ++E+
Sbjct: 167 PSPICANADSPASEALTLMVEKGFRHLPVLDDKSRIVGVLDITKSYAQQMEKLERLHASS 226
Query: 184 SAIAAAVEGVERQWG--SNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
+ A++ V + G + + E L+ +M P+LS+++ + V
Sbjct: 227 KNLYEALDSVHNEMGVADQPRHIFEYFEDLKSKMDGPTLSSVLDSATTPIYTNVKCSVLE 286
Query: 242 AAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A +M+E R+ + L+ T ++ GI TSKDV++RV+A L+P+ V R +
Sbjct: 287 ATIQMKENRTTAVLVNDTSGELTGIFTSKDVVLRVIAAGLNPKTCSVVRVM 337
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A +M R AVL+ D + L+GI T KD+ RVIA GL P V ++MT P
Sbjct: 284 VLEATIQMKENRTTAVLVNDTSGELTGIFTSKDVVLRVIAAGLNPKTCSVVRVMTPQPDV 343
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY---DAISRMEKAAEQGSA 185
+ +AL++M +G + +LPVV+N G++I I+D+ K Y + I R+E+++ +
Sbjct: 344 ANERTSIQQALRQMFEGHYLNLPVVDNEGDIIGIVDVLKLTYATLNQIKRIEQSSRTSDS 403
Query: 186 IAAAVEG--VERQWGS-NFSAPYAFIETL 211
+ + EG + W S + + YA ++L
Sbjct: 404 VEESSEGPAWNKFWTSLDNDSDYANSDSL 432
>gi|422295638|gb|EKU22937.1| myosin-like protein, partial [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 132/255 (51%), Gaps = 23/255 (9%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V KLR K L + T V+ + M RR AVLLT + LSGI+TD D+T RV+++
Sbjct: 1 RPVSKLRPDKPLVLAATTSVAAVAQVMVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSK 60
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCL 169
L + T +MT NP VT + ++AL MV+G FRHLPV+++G+ V+ LDI KCL
Sbjct: 61 ELSVEGTTAEDVMTANPTTVTLEDDCLDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCL 120
Query: 170 YDAISRMEKAAEQ-----GSAIAAAVEGVERQW-----GSNFSAPYAFIETLRERMFK-- 217
DAI R+EK E G+ +E G A + TL + +
Sbjct: 121 NDAIIRLEKMEEHREKQLGNGTNKQLEAAAMAMALAGRGGGGKHQTALVSTLMQLLSSSG 180
Query: 218 ----------PSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILT 267
PS+ ++++ + A++S V A+++M R ++ ++ G++T
Sbjct: 181 GNGEDGGSKLPSVGSMLSGASSTALLSKEASVLEASREMAASRKACLVVGENGELIGLVT 240
Query: 268 SKDVLMRVVAQNLSP 282
KDVL RVVA+ LSP
Sbjct: 241 FKDVLGRVVAKGLSP 255
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S AL E +++ +A R MA+ R A L+ N L G+VT KD+ RV+A+GL P +
Sbjct: 202 STALLSKEASVL-EASREMAASR-KACLVVGENGELIGLVTFKDVLGRVVAKGLSPGGAI 259
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
+ ++MT P VT D ++AL M G F +LPVV E+G + +L
Sbjct: 260 LGEVMTPKPGSVTPDMSLLDALYTMRDGHFLNLPVVEESGRALGLL 305
>gi|255728581|ref|XP_002549216.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133532|gb|EER33088.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 618
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 130/236 (55%), Gaps = 4/236 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S + + V + + M ++R + VL+ D L GI T KD+ R++ G
Sbjct: 52 TVLSLKPSDPIICKTTSTVYEVSQLMTAKRENCVLVVDEVGQLLGIFTAKDLAFRIVGSG 111
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L +Q + +IMT++PI +++ A EAL MV+ FRHLPV+ ++ ++ +LDITKC
Sbjct: 112 LNANQVTIDQIMTKDPICANANNAAGEALTLMVEKGFRHLPVLDDDNHIVGVLDITKCYA 171
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTIITENA 228
+ +S++E+ + A++ V + G + + F ETL+ +M P+L ++ +
Sbjct: 172 EQMSKLERMHSSSKKLYEALDSVHSEMGVSEQPQHVFQYFETLKNKMNGPTLENVLDFHT 231
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
+ + V A M+E R+ + L+ T ++ GI TSKDV++RV+A L P+
Sbjct: 232 EPIYTNVKASVFEATILMKENRTTAVLVKDTNDEVAGIFTSKDVVLRVIAAGLDPK 287
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + + ++MT P
Sbjct: 242 VFEATILMKENRTTAVLVKDTNDEVAGIFTSKDVVLRVIAAGLDPKKCSIVRVMTPQPD- 300
Query: 130 VTSDSLAI-EALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEK 178
V SL + EAL+KM G + +LPVV + E+I I+D+ K Y ++++++
Sbjct: 301 VAHVSLPVPEALRKMFDGHYLNLPVVGDEDEIIGIVDVLKLTYVTLNQLKQ 351
>gi|448535220|ref|XP_003870934.1| hypothetical protein CORT_0G01200 [Candida orthopsilosis Co 90-125]
gi|380355290|emb|CCG24807.1| hypothetical protein CORT_0G01200 [Candida orthopsilosis]
Length = 620
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S + V + + M + R + VL+ + L GI T KD+ R++ G
Sbjct: 69 TVLSLKPSDPIICKTTATVHEVSQMMTATRENCVLVVNDIGELLGIFTAKDLAFRIVGSG 128
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
L + + +IMT +PI +++ A EAL MV+ FRHLPV++N +++ +LDITKC
Sbjct: 129 LTANSVTIDQIMTADPICANANNPASEALNLMVERGFRHLPVLDNDNQIVGVLDITKCYA 188
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTIITENA 228
+ ++E+ Q + A V + G + F ETL+ +M P+L ++ E
Sbjct: 189 QQMEKLERMHAQSKTLYDAWNSVHNEIGVQDQPQHVFQYFETLKSKMNGPTLDNVLDETT 248
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ VS V A M+E ++ + L+ T ++ GI TSKDV++RV+A L P+ V
Sbjct: 249 EPIYVSVKTSVYEATVLMKENKTTAVLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSV 308
Query: 288 ERFI 291
R +
Sbjct: 309 VRVM 312
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M + AVL+ D N ++GI T KD+ RVIA GL P V ++MT +P
Sbjct: 257 TSVYEATVLMKENKTTAVLVKDTNQEVTGIFTSKDVVLRVIAAGLDPKNCSVVRVMTSHP 316
Query: 128 IFVTSDSLAI-EALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
V SL I +AL+KM G + +LPVV N ++I ++D+ K Y ++++++
Sbjct: 317 D-VAYASLPIQQALRKMFDGHYLNLPVVNNEDDIIGMVDVLKLTYATLTQIKQ 368
>gi|50302383|ref|XP_451126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640257|emb|CAH02714.1| KLLA0A02893p [Kluyveromyces lactis]
Length = 637
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 148/284 (52%), Gaps = 31/284 (10%)
Query: 38 GESSSSVGGAGGER--------TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD 89
G+SS+ G G++ TV L S+ + V +A + M+++R + +L+ D
Sbjct: 50 GKSSTKKGQNSGKKNRNASSPGTVLSLSPSEPVVCKPSATVYEAAQLMSAKRENCILVVD 109
Query: 90 AN-------------ALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+ ALL GI T KD+ RV+ GL+ + +IMT +P+ TSD+LA
Sbjct: 110 YDDDTNLEDDSSISGALL-GIFTAKDLAFRVVGTGLKASSVTIDQIMTPHPLCATSDTLA 168
Query: 137 IEALQKMVQGKFRHLPVVENGE--VIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVE 194
+AL MV+ FRHLPV++ +I++LDITKC +A+ ++E+ E + A +
Sbjct: 169 SDALNLMVERGFRHLPVIDEDTHAIISVLDITKCYQEAMEKLERMYEHSKKLHDAFNSIS 228
Query: 195 RQWG--SNFSAPY---AFIETLRERMFKPSLSTIITENAKV-AIVSPSDPVAVAAKKMRE 248
+ G S S P+ + E ++ M P+L +++ + V + V+ V AA M++
Sbjct: 229 NEIGGLSGGSQPFEVVKYFEHMKSVMNGPTLESVLHDETTVPSYVNVKTSVHEAALTMKD 288
Query: 249 FRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+ + L+ +++ GI TSKDV++RV+A L P+ V R +
Sbjct: 289 NHTTAVLVKNEVNEVSGIFTSKDVVLRVIAAGLDPKTVSVIRVM 332
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ + +SGI T KD+ RVIA GL P V ++MT P
Sbjct: 277 TSVHEAALTMKDNHTTAVLVKNEVNEVSGIFTSKDVVLRVIAAGLDPKTVSVIRVMTPQP 336
Query: 128 IFVTSDSLAIE-ALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
V +L+I+ AL+KM +G + +LPVV++GE++ I+++ K Y +S++
Sbjct: 337 D-VAPKTLSIQQALRKMFEGHYLNLPVVDDGEIVGIVEVLKLTYATLSQI 385
>gi|241950133|ref|XP_002417789.1| CBS/PB1 domain-containing protein [Candida dubliniensis CD36]
gi|223641127|emb|CAX45503.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 605
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 4/248 (1%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G TV L+ + + V + + M +RR + VL+ + L GI T KD+ R+
Sbjct: 44 GAPGTVLWLKPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRI 103
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
+ GL Q + IMT+NPI + A +AL MV+ FRHLPV+ E +++ +LDIT
Sbjct: 104 VGSGLNATQVTIDTIMTKNPICANATDPAGDALNLMVEKGFRHLPVLDEKSQIVGVLDIT 163
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP--YAFIETLRERMFKPSLSTII 224
K + ++E+ + A++ V + G N Y + ETL+ +M P+L +
Sbjct: 164 KSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVNEQPHHVYQYFETLKNKMNGPTLEDAL 223
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
N V+ V A M+E R+ + L+ T ++ GI TSKDV++RV+A L P+
Sbjct: 224 DANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPK 283
Query: 284 LTLVERFI 291
V R +
Sbjct: 284 KCSVVRVM 291
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + V ++MT P
Sbjct: 238 VHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDV 297
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
+AL+KM G + +LPVV N G++I ++++ K + ++++++
Sbjct: 298 APIGLPVQDALRKMFDGHYLNLPVVANEGDIIGVVEVLKLTHITLNQIKQ 347
>gi|448112259|ref|XP_004202051.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
gi|359465040|emb|CCE88745.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
Length = 598
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 141/260 (54%), Gaps = 8/260 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
+LSK +S+ G G +V L+ S+++ + V +A + M+++R + +L+
Sbjct: 43 DLSKKKRNNAKSTRFKKGTPG--SVLALKPSESIICRTTSTVYEAAQLMSTKRENCLLVV 100
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
+ L GI T KD+ R++ GL + + +IMT NP+ S++ A EAL MV KF
Sbjct: 101 NDAGELMGIFTAKDLAFRIVGSGLNANSVTIDQIMTPNPMCANSNTPASEALNLMVHKKF 160
Query: 149 RHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY-- 205
RHLPV+++ +++ ILDITKC + R+E+ + A++ V Q G + +
Sbjct: 161 RHLPVLDDSNQIVGILDITKCYSQQMERLERMYLSSKKLYEALDNVHSQIGYTEQSSHIA 220
Query: 206 AFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--TGSKIQ 263
+ E L++++ P L T++ +N+ I + A + + + +A++V T ++
Sbjct: 221 EYFEHLKDKISGPRLETML-DNSTAPIYATIKTSVYDATVLMKDNNTTAVLVKDTNDEVA 279
Query: 264 GILTSKDVLMRVVAQNLSPE 283
GI TSKDV++RV+A L P+
Sbjct: 280 GIFTSKDVVLRVIASGLDPK 299
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M AVL+ D N ++GI T KD+ RVIA GL P + ++MT P
Sbjct: 252 TSVYDATVLMKDNNTTAVLVKDTNDEVAGIFTSKDVVLRVIASGLDPKNCSIVRVMTPQP 311
Query: 128 IFVTSDSLAI-EALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
V + S++I EAL+KM G + +LPV + GE++ I+D+ K Y ++++++
Sbjct: 312 D-VANYSVSIQEALRKMFNGHYLNLPVTNDEGEIVGIVDVLKLTYAVLNQIKQ 363
>gi|357515721|ref|XP_003628149.1| CBS domain containing protein [Medicago truncatula]
gi|355522171|gb|AET02625.1| CBS domain containing protein [Medicago truncatula]
Length = 212
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 75/97 (77%), Gaps = 8/97 (8%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVKKL SKALTI EG VSDACRRMA+RRVDAVLLTDAN LL GI+TDK I V
Sbjct: 47 GERTVKKLHSSKALTISEGISVSDACRRMAARRVDAVLLTDANGLLFGIMTDK-IQGSVT 105
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
++VSK+MTRNP+FVTSD+LAI+A QKMV
Sbjct: 106 G-------SMVSKVMTRNPLFVTSDTLAIDAHQKMVH 135
>gi|448114822|ref|XP_004202675.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
gi|359383543|emb|CCE79459.1| Piso0_001524 [Millerozyma farinosa CBS 7064]
Length = 598
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 141/260 (54%), Gaps = 8/260 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
+LSK +S+ G G +V L+ S+++ + V +A + M+++R + +L+
Sbjct: 43 DLSKKKRNNAKSTRFKKGTPG--SVLALKPSESIICRTTSTVYEAAQLMSTKRENCLLVV 100
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
+ L GI T KD+ R++ GL + + +IMT NP+ S++ A EAL MV KF
Sbjct: 101 NDAGELMGIFTAKDLAFRIVGSGLNANSVTIDQIMTPNPMCANSNTPASEALNLMVHKKF 160
Query: 149 RHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY-- 205
RHLPV+++ +++ ILDITKC + R+E+ + A++ V Q G + +
Sbjct: 161 RHLPVLDDSNQIVGILDITKCYSQQMERLERMYLSSKKLYEALDNVHSQIGFTEQSSHIA 220
Query: 206 AFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIV--TGSKIQ 263
+ E L++++ P L T++ +N+ I + A + + + +A++V T ++
Sbjct: 221 EYFEHLKDKISGPRLETML-DNSTAPIYATIKTSVYDATVLMKDNNTTAVLVKDTNDEVA 279
Query: 264 GILTSKDVLMRVVAQNLSPE 283
GI TSKDV++RV+A L P+
Sbjct: 280 GIFTSKDVVLRVIASGLDPK 299
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M AVL+ D N ++GI T KD+ RVIA GL P + ++MT P
Sbjct: 252 TSVYDATVLMKDNNTTAVLVKDTNDEVAGIFTSKDVVLRVIASGLDPKNCSIVRVMTPQP 311
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
EAL+KM G + +LPV ++ GE++ I+D+ K Y ++++++
Sbjct: 312 DVANCGVSIQEALRKMFNGHYLNLPVTDDEGEIVGIVDVLKLTYAVLNQIKQ 363
>gi|344232849|gb|EGV64722.1| hypothetical protein CANTEDRAFT_104365 [Candida tenuis ATCC 10573]
Length = 619
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 6/237 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+A+T T V +A + M ++R + +L+ + L GI T KD+ RV+
Sbjct: 71 TVLALKPSEAVTCKPSTTVFEASQLMTAKRENCILVVGEDGELLGIFTAKDLAFRVVGSN 130
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLY 170
L + + +IMT NP+ ++ A +AL M+Q +FRHLPV++N + ++ +LDITKC
Sbjct: 131 LNANVITIDQIMTPNPLCTNANDPASDALTVMIQKRFRHLPVLDNRDRIVGVLDITKCYS 190
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
+ ++E+ E + A + V + P + + E L+ +M P+L T++
Sbjct: 191 QQMEKLERMHESSKRLYEAFDTVHSEMAV-VQQPLQVFQYFEELKSKMNGPTLDTVLDSR 249
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSPE 283
S V A M+E + + L+ K+ GI TSKDV++RV+A L+P+
Sbjct: 250 TVPIYCSIKTTVYEATVLMKENNTTAVLVKDNEDKVNGIFTSKDVVLRVIAAGLTPK 306
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A M AVL+ D ++GI T KD+ RVIA GL P + ++MT P
Sbjct: 259 TTVYEATVLMKENNTTAVLVKDNEDKVNGIFTSKDVVLRVIAAGLTPKNCSIVRVMTPQP 318
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGS 184
D E+L+KM G + +LPVV ++G++I I+++ K Y ++++++ +Q S
Sbjct: 319 DVARHDLSIQESLRKMFDGHYLNLPVVGDSGDIIGIVEVLKLTYATLNQIKQVKDQES 376
>gi|19114942|ref|NP_594030.1| conserved protein Mug20 [Schizosaccharomyces pombe 972h-]
gi|3183377|sp|O13965.1|MUG70_SCHPO RecName: Full=Meiotically up-regulated gene 70 protein
gi|2330788|emb|CAB11262.1| conserved protein Mug20 [Schizosaccharomyces pombe]
Length = 730
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 137/256 (53%), Gaps = 25/256 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L ALT+ ++V++ + MA++R + VL+ D + L+GIVT DI TR + G
Sbjct: 64 TVDSAALDPALTVHMQSLVTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAG 123
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV----------ENGEVIA 161
L QT+++ IM+ +P+ +TSD+ +AL M++ KFRHLPVV + G+VI
Sbjct: 124 LNARQTLIADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIG 183
Query: 162 ILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW--------------GSNFSAPY-A 206
I+++ CL + ++R+ + E + A+EG + + N +A +
Sbjct: 184 IINMRACLREPLNRIARQQEAAQKLVEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLE 243
Query: 207 FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGIL 266
++E+L+++ + ++I + + +V VA A + M ++ L++ + G+
Sbjct: 244 YVESLKKKASGLEIMSLIDSSEEPFLVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVF 303
Query: 267 TSKDVLMRVVAQNLSP 282
T+ DV++RV+A L P
Sbjct: 304 TAHDVVLRVLAAGLDP 319
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V++A MA V AVL+ D N +SG+ T D+ RV+A GL P ++ V ++MT +P
Sbjct: 274 TTVAEATESMARSGVSAVLVMD-NGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPHP 332
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVI 160
+ AL++M++GKF +LPVV+ + I
Sbjct: 333 DCALASLRVSTALERMIEGKFSNLPVVDESDAI 365
>gi|294659574|ref|XP_461972.2| CBS/PB1 domain-containing protein [Debaryomyces hansenii CBS767]
gi|199434069|emb|CAG90442.2| DEHA2G09790p [Debaryomyces hansenii CBS767]
Length = 607
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ S+ + + V + + M+++R + +L+ + L GI T KD+ R++ G
Sbjct: 64 TVLSLKPSEPIICKTSSTVYEVSQLMSAKRENCILVVNDIGELLGIFTAKDLAFRIVGAG 123
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L + +IMT NP+ S++ A EAL MV FRHLPV+ EN +++ +LDITKC
Sbjct: 124 LSATSVTIDQIMTPNPMCANSNTPASEALNLMVHKGFRHLPVLDENNQIVGVLDITKCYA 183
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITEN 227
+ ++E+ + A++ V + G P + + E L+ +M P+L +++
Sbjct: 184 QQMEKLERMHSSSKKLYEALDNVHSEMGM-MQQPLHVFQYFENLKNKMNGPTLESVLDAT 242
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
+ V A M+E ++ + LI T ++ GI TSKDV++RV+A L P+
Sbjct: 243 TTPVYTTVKTTVYDATVLMKENKTTAVLIKDTNEEVAGIFTSKDVVLRVIAAGLDPK 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA M + AVL+ D N ++GI T KD+ RVIA GL P + + ++MT P
Sbjct: 252 TTVYDATVLMKENKTTAVLIKDTNEEVAGIFTSKDVVLRVIAAGLDPKKCSIVRVMTPQP 311
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
D EAL++M +G++ +LP+V N +++ I+D+ K Y ++++++
Sbjct: 312 DIAKQDLSIQEALRQMFEGRYLNLPIVGNENDIVGIVDVLKLTYATLNQIKQ 363
>gi|357515775|ref|XP_003628176.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355522198|gb|AET02652.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 561
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 75/97 (77%), Gaps = 8/97 (8%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
GERTVKKL SKALTI EG VSDACRRMA+RRVDAVLLTDAN LL GI+TDK I V
Sbjct: 47 GERTVKKLHSSKALTISEGISVSDACRRMAARRVDAVLLTDANGLLFGIMTDK-IQGSVT 105
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
++VSK+MTRNP+FVTSD+LAI+A QKMV
Sbjct: 106 G-------SMVSKVMTRNPLFVTSDTLAIDAHQKMVH 135
>gi|344302225|gb|EGW32530.1| hypothetical protein SPAPADRAFT_139714 [Spathaspora passalidarum
NRRL Y-27907]
Length = 653
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 128/245 (52%), Gaps = 5/245 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV LR + + + V + + M ++R + +L+ + L GI T KD+ RV+ G
Sbjct: 67 TVMSLRPNDPIACKASSTVYEISQLMTAKRENCILVINEAGELMGIFTAKDLAFRVVGAG 126
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEVIAILDITKCL 169
L + +IMT NPI ++ A EAL MV+ FRHLPV+ E +++ +LDITKC
Sbjct: 127 LNASSITIDQIMTPNPICAFANQPASEALTLMVEKGFRHLPVLDEETNQILGVLDITKCY 186
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWG--SNFSAPYAFIETLRERMFKPSLSTIITEN 227
+ ++E+ S + A+ + + G + + + + ETL+++M P+L +++
Sbjct: 187 EQQMEKLERMHSSSSKLDDALNSIHSEIGIDEHPAQVFEYFETLKQKMNSPTLESVLDFT 246
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTL 286
+ V A M+E R+ + LI T ++ GI TSKDV++RV+A L P+
Sbjct: 247 TGPVFTNVKASVYEATILMKENRTTAVLIKDTNDEVAGIFTSKDVVLRVIAAGLDPKTCS 306
Query: 287 VERFI 291
+ R +
Sbjct: 307 IVRVM 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + ++MT +P
Sbjct: 258 VYEATILMKENRTTAVLIKDTNDEVAGIFTSKDVVLRVIAAGLDPKTCSIVRVMTPHPDV 317
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRME 177
+ +AL++M++G + +LPV+ E+ E+I I+D+ K Y +S+++
Sbjct: 318 ANVNLPVQQALRQMLEGHYLNLPVIGEDQEIIGIVDVLKLTYVTLSQIK 366
>gi|213407912|ref|XP_002174727.1| CBS domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212002774|gb|EEB08434.1| CBS domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 655
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 138/259 (53%), Gaps = 22/259 (8%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ ALT+ T+VS+AC+ MA++R + +L+ D L+GI+T D++ + + G
Sbjct: 71 TVASASLAPALTVQTHTLVSEACQLMAAKREECLLVVDEAQQLTGIITSLDVSRKCVGGG 130
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--------ENGEVIAIL 163
P + V MT PI +TSD+ +AL M++ +LPVV E+G+V+ IL
Sbjct: 131 FDPRGSTVESFMTEGPICITSDTQFADALALMLEHDRIYLPVVSDGTDEGCEDGDVLGIL 190
Query: 164 DITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW------GSNFSAPYA-FIETLRE--- 213
DI CL++ +SR+++ + + + A+ G + GS ++ + ++E+LR+
Sbjct: 191 DICSCLHEPLSRVKRQEDAAAKLMEALAGAHDELDGSSLSGSAHASEFVEYVESLRQKAA 250
Query: 214 -RMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVL 272
R L ++ E V + + V A++ M + +N+ L++ + GI TS D++
Sbjct: 251 GREVGALLEDVLFEPVLVGVRT---SVLEASQLMAQAEANAVLVMDQGLVSGIFTSHDIV 307
Query: 273 MRVVAQNLSPELTLVERFI 291
+RVVA L P V R +
Sbjct: 308 LRVVAAGLDPSKCSVIRIM 326
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + MA +AVL+ D L+SGI T DI RV+A GL P + V +IMT +P
Sbjct: 272 TSVLEASQLMAQAEANAVLVMD-QGLVSGIFTSHDIVLRVVAAGLDPSKCSVIRIMTPHP 330
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITK 167
AL++M++G F +LPV+ EN ++ +L+IT+
Sbjct: 331 DCALVSLHISTALERMLEGGFNNLPVIDENDGIVGLLNITQ 371
>gi|149239558|ref|XP_001525655.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451148|gb|EDK45404.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 652
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 125/244 (51%), Gaps = 4/244 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L+ ++ +T V + + M +RR + VL+ L GI T KD+ RV+ G
Sbjct: 48 TVLSLKPNEPITCKATATVYEVSQLMIARRENCVLVVGEEGDLMGIFTAKDLAFRVVGAG 107
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLY 170
L ++KIMT NPI ++ A +AL MV FRHLPV E +V+ ILDIT C
Sbjct: 108 LNAGNVTINKIMTPNPICTMENNPASDALTLMVDKGFRHLPVKNELQQVVGILDITNCYA 167
Query: 171 DAISRMEKAAEQGSAIAAAVEGVERQWG--SNFSAPYAFIETLRERMFKPSLSTIITENA 228
+ ++E+ + A++ V+ + G + + + E LR +M P+L T++ E
Sbjct: 168 QQMEKLERMHNSSKKLYEALDSVQTEIGLKQHPQQVFEYFEKLRSKMNGPTLETVLDEQT 227
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
VS V A M+E + + L+ T ++ GI TSKDV++RV+A L P+ V
Sbjct: 228 APIYVSVKATVLEATVLMKENNTTAVLVKDTNEELTGIFTSKDVVLRVIAAGLEPKQCSV 287
Query: 288 ERFI 291
R +
Sbjct: 288 VRVM 291
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ E T++ M AVL+ D N L+GI T KD+ RVIA GL P Q V ++
Sbjct: 237 TVLEATVL------MKENNTTAVLVKDTNEELTGIFTSKDVVLRVIAAGLEPKQCSVVRV 290
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
MT P ++ +AL++M G + +LPV +G
Sbjct: 291 MTPQPDVANANLPIQQALRQMFNGHYLNLPVFCDG 325
>gi|238878382|gb|EEQ42020.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 605
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G TV L+ + + V + + M +RR + VL+ + L GI T KD+ R+
Sbjct: 44 GAPGTVLWLKPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRI 103
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
+ GL Q + IMT+NPI + A +AL MV+ FRHLPV+ E +++ +LDIT
Sbjct: 104 VGSGLNATQVTIDTIMTKNPICANAADPAGDALNLMVERGFRHLPVLDEKSQIVGVLDIT 163
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTII 224
K + ++E+ + A++ V + G + F ETL+ +M P+L +
Sbjct: 164 KSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVGEQPHHVFQYFETLKNKMNGPTLEDAL 223
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
N V+ V A M+E R+ + L+ T ++ GI TSKDV++RV+A L P+
Sbjct: 224 DANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPK 283
Query: 284 LTLVERFI 291
V R +
Sbjct: 284 KCSVVRVM 291
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + V ++MT P
Sbjct: 238 VHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDV 297
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
+AL+KM G + +LPVV N G++I ++++ K + ++++++
Sbjct: 298 APIGLPVQDALRKMFDGHYLNLPVVANEGDIIGVVEVLKLTHITLNQIKQ 347
>gi|68479125|ref|XP_716368.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
gi|68479256|ref|XP_716307.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
gi|46437973|gb|EAK97311.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
gi|46438035|gb|EAK97372.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
Length = 605
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G TV L+ + + V + + M +RR + VL+ + L GI T KD+ R+
Sbjct: 44 GAPGTVLWLKPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRI 103
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
+ GL Q + IMT+NPI + A +AL MV+ FRHLPV+ E +++ +LDIT
Sbjct: 104 VGSGLNATQVTIDTIMTKNPICANAADPAGDALNLMVERGFRHLPVLDEKSQIVGVLDIT 163
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAF--IETLRERMFKPSLSTII 224
K + ++E+ + A++ V + G + F ETL+ +M P+L +
Sbjct: 164 KSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVGEQPHHVFQYFETLKNKMNGPTLEDAL 223
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
N V+ V A M+E R+ + L+ T ++ GI TSKDV++RV+A L P+
Sbjct: 224 DANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPK 283
Query: 284 LTLVERFI 291
V R +
Sbjct: 284 KCSVVRVM 291
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M R AVL+ D N ++GI T KD+ RVIA GL P + V ++MT P
Sbjct: 238 VHEATMLMKENRTTAVLVKDTNEQVAGIFTSKDVVLRVIAAGLDPKKCSVVRVMTPQPDV 297
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEK 178
+AL+KM G + +LPVV N G++I ++++ K + ++++++
Sbjct: 298 APIGLPVQDALRKMFDGHYLNLPVVANEGDIIGVVEVLKLTHITLNQIKQ 347
>gi|190346549|gb|EDK38658.2| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
6260]
Length = 551
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 133/245 (54%), Gaps = 5/245 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V L+ S+ +T + T + + + M+++R + VL+ D + L G+ T KD+ RV+ G
Sbjct: 57 SVLSLKPSEPVTCTKNTTIYEVAQLMSAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSG 116
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE--NGEVIAILDITKCL 169
L V ++MT NP+ ++ S A +AL +M++ KFRH+PVVE N E+I +LDI
Sbjct: 117 LDATVATVGQVMTSNPLTSSATSPASQALDQMLEHKFRHMPVVEDSNTEIIGVLDIVTFY 176
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY--AFIETLRERMFKPSLSTIITEN 227
+ + E+ + + ++ + G + P+ ++E+LR ++ P++ +++
Sbjct: 177 KKQMKKFERLNANSARLFDTLDVLHNDLGMESNPPHIEEYLESLRSQVNGPTIQSVVGNV 236
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTL 286
++ S V A M+ ++ LI GS K+ GI++SKDV R +A L+P++
Sbjct: 237 SRPVFASLKATVYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICS 296
Query: 287 VERFI 291
V R +
Sbjct: 297 VVRVM 301
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V + M + +L+ D + + GIV+ KD+T R IA GL P V ++MT NP
Sbjct: 248 VYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICSVVRVMTANPDV 307
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRMEKAAEQG 183
V + + +AL++M+ G + +LPV ++ +IA++D+ ++ + + A +G
Sbjct: 308 VNTSTTIRQALKQMLDGNYLNLPVEDSSHSIIAVVDVLSLIHATLQNVGPAELEG 362
>gi|146418122|ref|XP_001485027.1| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
6260]
Length = 551
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 132/245 (53%), Gaps = 5/245 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V L+ S+ +T + T + + + M ++R + VL+ D + L G+ T KD+ RV+ G
Sbjct: 57 SVLSLKPSEPVTCTKNTTIYEVAQLMLAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSG 116
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE--NGEVIAILDITKCL 169
L V ++MT NP+ ++ S A +AL +M++ KFRH+PVVE N E+I +LDI
Sbjct: 117 LDATVATVGQVMTSNPLTSSATSPASQALDQMLEHKFRHMPVVEDSNTEIIGVLDIVTFY 176
Query: 170 YDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPY--AFIETLRERMFKPSLSTIITEN 227
+ + E+ + + ++ + G + P+ ++E+LR ++ P++ +++
Sbjct: 177 KKQMKKFERLNANSARLFDTLDVLHNDLGMESNPPHIEEYLESLRSQVNGPTIQSVVGNV 236
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQNLSPELTL 286
++ S V A M+ ++ LI GS K+ GI++SKDV R +A L+P++
Sbjct: 237 SRPVFASLKATVYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICS 296
Query: 287 VERFI 291
V R +
Sbjct: 297 VVRVM 301
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V + M + +L+ D + + GIV+ KD+T R IA GL P V ++MT NP
Sbjct: 248 VYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAIAAGLNPKICSVVRVMTANPDV 307
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRMEKAAEQGSAIAA 188
V + + +AL++M+ G + +LPV ++ +IA++D+ ++ + + A
Sbjct: 308 VNTSTTIRQALKQMLDGNYLNLPVEDSSHSIIAVVDVLSLIHATLQNVG---------PA 358
Query: 189 AVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMR 247
+EG +W + ++ +E+ R L++ + E + PSD V+ A ++
Sbjct: 359 ELEGGGSRWNNFWTTVDDELESGRSVNDSGELNSFLME------IKPSDSVSHTASPLK 411
>gi|219122133|ref|XP_002181407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407393|gb|EEC47330.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 443
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 15/253 (5%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ER V KLR SK +T + + ++S+R A L+ + L+GI+TD DIT RV+A
Sbjct: 4 ERPVSKLRPSKPITSRIDDTILRVSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVA 63
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKC 168
+ + T VS++MT NP V A++AL MV+ FRHLPVV++ G V+ +LDI KC
Sbjct: 64 KHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKC 123
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVERQ------WGSNFSAPYAFIETLRERMF----KP 218
L DAIS++E+ +E+ + +AA + V++ G+ +A A + L + F P
Sbjct: 124 LNDAISKLERTSEKTN--SAAEDAVKQMVAQQGAGGAQAAALKALLGNLMSQAFGGKQMP 181
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
+L +++ +V PS + +M + R +AL+V ++ G+ T KD++ R VA+
Sbjct: 182 TLRSLLAGKPG-TLVDPSTSIRNCGLRMADSR-KAALVVDDGELVGVFTFKDMMSRAVAK 239
Query: 279 NLSPELTLVERFI 291
L ++T V + +
Sbjct: 240 ELDLDVTPVSQVM 252
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSL 135
RMA R A+++ D L G+ T KD+ +R +A+ L D T VS++MT +P FV+ D
Sbjct: 207 RMADSRKAALVVDDGE--LVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMT 264
Query: 136 AIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+EALQ M KF LPV E +G V+ ++D+ ++
Sbjct: 265 VLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIH 300
>gi|239925803|gb|ACS35536.1| myosin 29 [Phaeodactylum tricornutum]
Length = 2303
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 141/251 (56%), Gaps = 11/251 (4%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ER V KLR SK +T + + ++S+R A L+ + L+GI+TD DIT RV+A
Sbjct: 1791 ERPVSKLRPSKPITSRIDDTILRVSQTLSSKRGAASLVVSTDGSLAGIMTDTDITRRVVA 1850
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKC 168
+ + T VS++MT NP V A++AL MV+ FRHLPVV++ G V+ +LDI KC
Sbjct: 1851 KHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKC 1910
Query: 169 LYDAISRMEKAAEQ-GSAIAAAVEGV---ERQWGSNFSAPYAFIETLRERMF----KPSL 220
L DAIS++E+ +E+ SA AV+ + + G+ +A A + L + F P+L
Sbjct: 1911 LNDAISKLERTSEKTNSAAEDAVKQMVAQQGAGGAQAAALKALLGNLMSQAFGGKQMPTL 1970
Query: 221 STIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
+++ +V PS + +M + R +AL+V ++ G+ T KD++ R VA+ L
Sbjct: 1971 RSLLAGKPGT-LVDPSTSIRNCGLRMADSR-KAALVVDDGELVGVFTFKDMMSRAVAKEL 2028
Query: 281 SPELTLVERFI 291
++T V + +
Sbjct: 2029 DLDVTPVSQVM 2039
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 12/247 (4%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+ V KLR +K +T+ + + + +A +R +A ++ ++ LSGI+TD DIT RV+A+
Sbjct: 1440 KPVSKLRPAKPVTVEPSSSIDSVAQLLAMKRANATVVVSSDGSLSGILTDTDITRRVVAK 1499
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCL 169
+ + V ++MT P V + A++AL M++ FRHLPVV++ G V+ +LDI KCL
Sbjct: 1500 FVDTALSTVDEVMTPFPTCVAMEDSAMDALTIMLENHFRHLPVVDDRGIVVGLLDIAKCL 1559
Query: 170 YDAISRMEKAAEQGS-AIAAAVEGV-ERQWGSNFSAPYAFIETLRERMFK-------PSL 220
DAI ++EK +Q S A AV+ + + GS S A L M K P+L
Sbjct: 1560 DDAIGKLEKTNKQSSRAGEDAVKNILVNKSGSIDSQAVALQALLGNLMAKAFGDKTVPTL 1619
Query: 221 STIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
++ IV PS + A M E R +AL+V + G+ T KD+L R VA+ L
Sbjct: 1620 RALLGGKPGT-IVHPSASIREAGILMAETR-KAALVVDNDVLVGVFTFKDMLSRAVAKGL 1677
Query: 281 SPELTLV 287
+ T V
Sbjct: 1678 DLDATSV 1684
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSL 135
RMA R A+++ D L G+ T KD+ +R +A+ L D T VS++MT +P FV+ D
Sbjct: 1994 RMADSRKAALVVDDGE--LVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMT 2051
Query: 136 AIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+EALQ M KF LPV E +G V+ ++D+ ++
Sbjct: 2052 VLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVIH 2087
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 30/261 (11%)
Query: 47 AGGERTVKKLRLSKALTIPEGTIVS------DACRRMASRRVDAVLLTDANALLSGIVTD 100
A G++TV LR L GTIV +A MA R A L+ D N +L G+ T
Sbjct: 1610 AFGDKTVPTLR--ALLGGKPGTIVHPSASIREAGILMAETR-KAALVVD-NDVLVGVFTF 1665
Query: 101 KDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEV 159
KD+ +R +A+GL D T V+ +MT P V+ D A+EALQ M +F LPV E +G +
Sbjct: 1666 KDMLSRAVAKGLDLDATSVADVMTPEPESVSPDMNALEALQTMHDNRFLTLPVCESDGTI 1725
Query: 160 IAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGS----NFSAPYAFIETLRERM 215
+ ++++ +Y E ++ + V+ + N + I ++R
Sbjct: 1726 VGLVEVLDVIYGC-----GGPEGWRSMFDSAMDVDDDFSDVTSINSAGKSTLIAGRQDRS 1780
Query: 216 FKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALIV-TGSKIQGIL 266
+L E V+ + PS P+ ++ + R ++L+V T + GI+
Sbjct: 1781 TLQALEESTNERP-VSKLRPSKPITSRIDDTILRVSQTLSSKRGAASLVVSTDGSLAGIM 1839
Query: 267 TSKDVLMRVVAQNLSPELTLV 287
T D+ RVVA+++ T V
Sbjct: 1840 TDTDITRRVVAKHIDTSATSV 1860
>gi|126275953|ref|XP_001386928.1| CBS/PB1 domain-containing protein [Scheffersomyces stipitis CBS
6054]
gi|126212797|gb|EAZ62905.1| CBS domain-containing protein [Scheffersomyces stipitis CBS 6054]
Length = 609
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 8 RRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
+R KR + +R EN N K +G + +S TV L+ + +
Sbjct: 31 KRQTKRDDAIRRRI---ENDLNKKK----RGGTRTSRNRRAAPGTVLSLKPTDPIICKTS 83
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
+ V + + M +RR + VL+ + L GI T KD+ RV+ L + + +IMT NP
Sbjct: 84 STVYEVSQLMTARRENCVLVVNDVGELLGIFTAKDLAFRVVGSSLNANSVTIDQIMTPNP 143
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
+++ A EAL MV+ FRHLPV+ +N +++ +LDITKC + ++E+ +
Sbjct: 144 QCANANAAASEALTLMVERGFRHLPVLDDNNQIVGVLDITKCYAQQMEKLERMHASSKKL 203
Query: 187 AAAVEGVERQWGSNFSAP---YAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAA 243
A++ V + G P + + E L+ +M P+L +++ N + V A
Sbjct: 204 YEALDSVHSEMGVG-QQPLQVFKYFENLKSKMNGPTLESVLDANTVPVYSNVKSTVYEAT 262
Query: 244 KKMREFRSNSALIV-TGSKIQGILTSKDVLMRVVAQNLSPE 283
M+E R+ + L+ ++ GI TSKDV++RV+A L P+
Sbjct: 263 VLMKENRTTAVLVKDNNDEVTGIFTSKDVVLRVIAAGLDPK 303
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ E T++ M R AVL+ D N ++GI T KD+ RVIA GL P + ++
Sbjct: 257 TVYEATVL------MKENRTTAVLVKDNNDEVTGIFTSKDVVLRVIAAGLDPKNCSIVRV 310
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAE 181
MT P + +AL++M +G + +LPVV + ++I I+++ K Y ++++ K E
Sbjct: 311 MTPQPDVAKVNLPIQQALRQMFEGHYLNLPVVGDQNDIIGIVEVLKLTYATLNQI-KQLE 369
Query: 182 QGSAIAAAVEGVERQ 196
++ + +E+Q
Sbjct: 370 TADSVEQSGATLEQQ 384
>gi|226498664|ref|NP_001141602.1| uncharacterized protein LOC100273720 [Zea mays]
gi|194705242|gb|ACF86705.1| unknown [Zea mays]
gi|413951479|gb|AFW84128.1| hypothetical protein ZEAMMB73_744710 [Zea mays]
Length = 357
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%)
Query: 207 FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGIL 266
FIETLRERMF+PSLSTII+EN+KV V PSD V A+KKM E + +SA++ SK GIL
Sbjct: 24 FIETLRERMFRPSLSTIISENSKVVTVVPSDTVLTASKKMLELKMSSAVVAIESKPGGIL 83
Query: 267 TSKDVLMRVVAQNLSPELTLVERFI 291
TS+D+LMRV+AQNL PE T VE+ +
Sbjct: 84 TSRDILMRVIAQNLPPESTTVEKVM 108
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 59 SKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
SK +T+ P T+++ + + + + AV+ ++ GI+T +DI RVIA+ L P+ T
Sbjct: 45 SKVVTVVPSDTVLTASKKMLELKMSSAVVAIESKP--GGILTSRDILMRVIAQNLPPEST 102
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRM 176
V K+MT+ P + D+ ++AL M GKF HLPV++ +G V+ ++D+ + AI+ +
Sbjct: 103 TVEKVMTQCPECASVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITHAAIATV 162
Query: 177 EKAAEQGSAIAAAVEGVERQWGSNFS 202
+ GS +A+ ++R W S S
Sbjct: 163 GNSGAAGSESTSAM--MQRFWDSAMS 186
>gi|406602257|emb|CCH46150.1| Inosine-5'-monophosphate dehydrogenase [Wickerhamomyces ciferrii]
Length = 583
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M VL+ + N + G+ T KD +V+ +G+ PD +V IMT +P+F+
Sbjct: 30 AAKLMLENSAHCVLVQEGNRTV-GLFTAKDFAYKVVGKGIDPDSALVKDIMTTSPLFLHM 88
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVI-AILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ EAL+ MV+ RHLP+++N E I +LDIT+C + A+ R+EK + + ++
Sbjct: 89 NTPMTEALEIMVKRGIRHLPLLDNEENIKGVLDITRCFHQAMLRLEKISNNAKKLNQVLQ 148
Query: 192 GVERQWGSNFSAPYAFIETLRERMFK----PSLSTIITENAKVAIVSPSDPVAVAAKKMR 247
V + + S I +R+ + P+L +I+ E +K A+ S A +M
Sbjct: 149 EVAEDYEDSRSLQAQSIIDDIKRLMQLIEVPTLHSIV-EGSKPAVYIDSHASVRVAAEMM 207
Query: 248 EFRSNSALIVTG-----SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
S +ALIV ++ GI TSKD+ RV+A+N P+ V R +
Sbjct: 208 IANSTTALIVNDGTSSPKRVIGIFTSKDICFRVLAKNYDPDTCTVARVL 256
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI T KDI RV+A+ PD V++++T +P F S+ AL+ M QG F +LPV +
Sbjct: 229 GIFTSKDICFRVLAKNYDPDTCTVARVLTTSPEFAKSNITISAALRLMFQGHFLNLPVTD 288
Query: 156 --NGEVIAILDITKCLYDAISRMEK 178
E+I I+ + + Y A+S++ K
Sbjct: 289 VVTDEIIGIVSVLQLTYAALSQLGK 313
>gi|297611311|ref|NP_001065859.2| Os11g0170300 [Oryza sativa Japonica Group]
gi|255679827|dbj|BAF27704.2| Os11g0170300, partial [Oryza sativa Japonica Group]
Length = 97
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/58 (86%), Positives = 53/58 (91%)
Query: 144 VQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNF 201
V GKFRHLPVVENGEVIA+LDI KCLYDAISR+EKAAEQGSA+AAAVEGVERQ G N
Sbjct: 4 VLGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVEGVERQVGDNL 61
>gi|384489617|gb|EIE80839.1| hypothetical protein RO3G_05544 [Rhizopus delemar RA 99-880]
Length = 172
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 143 MVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNF 201
MV FRHLPV E G++ +LDITKCLY AI RME+A + A+EGVE W
Sbjct: 1 MVSRGFRHLPVTNEIGDIFGLLDITKCLYQAIERMERAFGLSQKLYDALEGVEHHWVKES 60
Query: 202 SAPYAFIETLRERMFKPSLSTIITE--NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTG 259
S ++E +R+ M P+L +++ E A+V + +AV KK+ + + L+
Sbjct: 61 SEVTDYLENMRKSMSCPTLESVLDEIPPAEVKHRTNVKEIAVMMKKV---HTTAVLVTRS 117
Query: 260 SKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
+QGI TSKD+++RV+A L+PE V R +
Sbjct: 118 HTLQGIFTSKDIVLRVIAAGLNPENCTVARVM 149
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M AVL+T ++ L GI T KDI RVIA GL P+ V+++MT P T ++
Sbjct: 104 MKKVHTTAVLVTRSHTL-QGIFTSKDIVLRVIAAGLNPENCTVARVMTPKPDTATPETTV 162
Query: 137 IEALQKM 143
++AL+ M
Sbjct: 163 LDALKLM 169
>gi|298705826|emb|CBJ34183.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 196
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
MA R DA +L D L GI++D+D+ RV+A L P T VS++MT +P V A
Sbjct: 1 MADVRTDAAILLDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADSA 60
Query: 137 IEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAA 180
+E L M++ +FRHLPV++ G V +L I KCLYDAI R++K A
Sbjct: 61 MECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKA 105
>gi|83310691|ref|YP_420955.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82945532|dbj|BAE50396.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 145
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPD 115
+R ALT+P V +A R+M +RRV AV++TD + L GI T++D RV+AEG+ PD
Sbjct: 10 IRDQVALTLPAAATVREAARQMKARRVGAVMVTDHHGKLKGIFTERDCLFRVLAEGVNPD 69
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
T ++ +MT +P +T+D AL M FRH+PVV++G + ++ I L +S
Sbjct: 70 TTTLALVMTADPTTITADRKLGHALHMMHDNGFRHIPVVDHGIPVGMISIRDALGSELSA 129
Query: 176 MEK 178
E+
Sbjct: 130 FER 132
>gi|385302513|gb|EIF46642.1| cbs and pb1 domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 457
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 53/236 (22%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G+VT KD+ RV A L +V S IMT +P F + A EAL+ MV K RHLP+++
Sbjct: 3 GLVTAKDMAFRVAAPDLDTMCSVTS-IMTTDPYFXPLSTSANEALRLMVXKKIRHLPLID 61
Query: 156 N--GEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGV-ERQWGSNFSA--------- 203
+ G V+ +L+ITKC Y A+ R+EK A+ + E + E GS++
Sbjct: 62 STTGVVVKLLNITKCFYHAMIRLEKMADGARRLQCTFENLNEYDLGSDYGMVQPLPSMQV 121
Query: 204 -PYA------FIETLRER--------------MFKPSLSTIITEN----AKVAIVSPSDP 238
P A F +R+R M +P L++++T+ A+ A + PS
Sbjct: 122 DPLAPTNEELFDRNIRQRKMRIANDIKRLISIMKQPELASLVTDKYFHLARCATLPPSAS 181
Query: 239 VAVAAKKMREFRSNSALI---------------VTGSKIQGILTSKDVLMRVVAQN 279
+ AA+ ++ +ALI + S + GI+T+KD+L RV+A N
Sbjct: 182 ILEAAQMLKAKNLTAALICNAPSLKESNKSTDTIMKSDVIGIITTKDILFRVLANN 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 22/142 (15%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--------------LSGI 97
T K L++ T+P + +A + + ++ + A L+ +A +L + GI
Sbjct: 164 TDKYFHLARCATLPPSASILEAAQMLKAKNLTAALICNAPSLKESNKSTDTIMKSDVIGI 223
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE-ALQKMVQGKFRHLPVVEN 156
+T KDI RV+A V++IMT P F +++ I+ AL+ M +GKF +LP+V N
Sbjct: 224 ITTKDILFRVLANNYDLKSMKVARIMTPRPNFA-QETMGIQSALRLMYEGKFLNLPIV-N 281
Query: 157 GE-----VIAILDITKCLYDAI 173
GE + +L++T L A+
Sbjct: 282 GEGEITGLANVLNLTNALLKAL 303
>gi|363753990|ref|XP_003647211.1| hypothetical protein Ecym_5661 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890847|gb|AET40394.1| hypothetical protein Ecym_5661 [Eremothecium cymbalariae
DBVPG#7215]
Length = 618
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 42 SSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDK 101
S V G+G TV L L K L E R + + R+ VL+ + L GI+T K
Sbjct: 2 SGVSGSGALPTVSSLSLDKPLFCREDDSTLFVARLIYAERIHCVLVLSGDRELCGIITTK 61
Query: 102 DITTRVIAEGLRPDQTVVSK-IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN--GE 158
DI R G D+ + ++ I+T P+ S+ L +AL+ M++ K RHLPV ++ G
Sbjct: 62 DIVFR----GCTMDERLKARDILTGTPVVGRSNMLVTQALELMIERKIRHLPVRQDSTGR 117
Query: 159 VIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGV-ERQWGSNFSAPYAFIETLRERMFK 217
V+ ILDITKC + A+ ++EK + + A+ V + ++ + L ++M
Sbjct: 118 VVGILDITKCFHQALLKLEKFTLSAAKLNNALNDVIDSDTSLDWMRFLKNVSKLIQQMET 177
Query: 218 PSLSTIITENAKV---AIVSPSDPVAVAAKKMREFRSNSALI------------VTGS-- 260
P+L TI+ AI PS VA A + MR + + L+ V G+
Sbjct: 178 PNLKTILDSPHYATTPAIAGPSTSVAEALELMRLHDTTAILVRDTEPLSKSSCKVGGTAH 237
Query: 261 ------------KIQGILTSKDVLMRVV 276
I GI TSKDV+ RV+
Sbjct: 238 ISIRKEGVQHDFNIIGIFTSKDVVCRVL 265
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 96 GIVTDKDITTRVIA--EGLRPDQTVVSKIMTRNPIFVTSDSLAIE-ALQKMVQGKFRHLP 152
GI T KD+ RV+ E + + ++++MT P + +L I AL+ M G F +LP
Sbjct: 253 GIFTSKDVVCRVLQYPENIDLNNCTLARVMTTRPNYALY-TLGIHSALRMMYDGHFLNLP 311
Query: 153 VV-ENGEVIAILDITKCLYDAIS 174
V+ E G ++ +L + + + A+S
Sbjct: 312 VIDERGSIVGLLTVLQLTHAALS 334
>gi|452962639|gb|EME67756.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 141
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPD 115
+R L +P T V +A R+M +R V AV++TD + L GI T++D V+AEG+ PD
Sbjct: 6 IRNQTVLAMPATTTVREAARQMKARGVGAVMVTDHHGKLRGIFTERDCLFDVVAEGINPD 65
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
T +S +MT +P +T+D +AL M FRH+PVV++G + ++ I L +S
Sbjct: 66 TTTLSMVMTPDPETITADRKLGQALHMMHDNGFRHIPVVDHGIPVGMVSIRDALGSELSN 125
Query: 176 MEK 178
E+
Sbjct: 126 FER 128
>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
Length = 153
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+P G V DA MA RR+ AVL+T+ AL GIVT++D+TTRV+A GL P+ T +S +M
Sbjct: 19 LPPGATVRDAATLMAERRIAAVLVTEGRAL-KGIVTERDMTTRVVAAGLDPETTPLSSVM 77
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
T +P + + A+ AL M + +RHLPV +GEV+ ++ I
Sbjct: 78 TADPDTLEPSATALAALDLMERRHYRHLPVAVDGEVVGMVSI 119
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 224 ITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
+ N +++ + P V AA M E R + L+ G ++GI+T +D+ RVVA L PE
Sbjct: 10 VIRNQELSCLPPGATVRDAATLMAERRIAAVLVTEGRALKGIVTERDMTTRVVAAGLDPE 69
Query: 284 LT 285
T
Sbjct: 70 TT 71
>gi|50305749|ref|XP_452835.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641968|emb|CAH01686.1| KLLA0C14190p [Kluyveromyces lactis]
Length = 595
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 117/254 (46%), Gaps = 28/254 (11%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
G TV L L + L + + + M S+R VL+T L GI+T KD+ +
Sbjct: 6 GIPTVANLPLEQPLFCTGDDSIYNVAKLMTSKRKYCVLVTSGEHL-EGIITTKDLAFK-- 62
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE--NGEVIAILDIT 166
EGL V +++ P+ S AL MV+ K RHLP+++ + +++ ILDIT
Sbjct: 63 -EGL-----VARDVLSTTPVLTPSSMPVTSALLIMVEQKIRHLPIIDPNSKQIVGILDIT 116
Query: 167 KCLYDAISRMEKAAEQGSAIAAAVEGV-ERQWGSNFSAPYAFIETLRERMFKPSLSTII- 224
KC + A+ R+E A+ + A++ V E + I TL E M P L +I+
Sbjct: 117 KCFHQAMRRLEIMAQDSVKLNNAIQDVIENEATMTRHKLLQDIATLIESMETPVLESILD 176
Query: 225 --TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-----------KIQGILTSKDV 271
N SP+ V+ A M E +S + LI S I GI TSKD
Sbjct: 177 SDVYNTTPLFASPTTTVSKAMSMMSENKSTAILIHDSSTKSDIRNNNDCNIIGIFTSKDF 236
Query: 272 LMRVVAQ--NLSPE 283
+ RV+ Q ++ PE
Sbjct: 237 VCRVLGQGNSVDPE 250
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 15/120 (12%)
Query: 68 TIVSDACRRMASRRVDAVLLTDA----------NALLSGIVTDKDITTRVIAEG--LRPD 115
T VS A M+ + A+L+ D+ + + GI T KD RV+ +G + P+
Sbjct: 191 TTVSKAMSMMSENKSTAILIHDSSTKSDIRNNNDCNIIGIFTSKDFVCRVLGQGNSVDPE 250
Query: 116 QTVVSKIMTRNPIFVTSDSLAIE-ALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAI 173
++++MT P F SL I AL+ M +G F +LPV+++ G ++ ++ + + + A+
Sbjct: 251 SCTLARVMTTRPNFAFQ-SLGIHSALRMMYEGHFLNLPVIDDTGNILGLISVLQLTHAAL 309
>gi|374293294|ref|YP_005040329.1| hypothetical protein AZOLI_2946 [Azospirillum lipoferum 4B]
gi|357425233|emb|CBS88119.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 153
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+P G V DA MA +R+ AVL+T+ L GIVT++D+TTRV+A GL PD T +S +M
Sbjct: 19 LPPGATVRDAATLMAEKRIAAVLVTEGRTL-KGIVTERDMTTRVVAAGLDPDTTPLSSVM 77
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
T +P + + A+ AL M + +RHLP+ +GEV+ ++ I
Sbjct: 78 TADPDTLVPSATALSALDLMERRHYRHLPIAVDGEVVGMVSI 119
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 224 ITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
+ +N ++ + P V AA M E R + L+ G ++GI+T +D+ RVVA L P+
Sbjct: 10 VIKNQELTCLPPGATVRDAATLMAEKRIAAVLVTEGRTLKGIVTERDMTTRVVAAGLDPD 69
Query: 284 LT 285
T
Sbjct: 70 TT 71
>gi|397629836|gb|EJK69525.1| hypothetical protein THAOC_09208, partial [Thalassiosira oceanica]
Length = 1618
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 51 RTVKKLRLSKALTIP-EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
R V KLR KA TI E V + +AS+R DA ++TD N L+GI+TD D+T RV+A
Sbjct: 1511 RPVSKLR-PKAPTIAKEDDTVLAVAQLLASKRGDAAIITDTNGGLAGIITDTDVTRRVVA 1569
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
+ L P T VS +MT NP V+ S A +A+ M+ +FRHLPV ++
Sbjct: 1570 KELHPSITHVSDVMTANPSCVSMSSSATDAMLTMIDNRFRHLPVTDD 1616
>gi|87121438|ref|ZP_01077327.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
gi|86163281|gb|EAQ64557.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
Length = 622
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
VK L ++I E + A +RMA +RV ++L+T + L+ GIVTD+D+ TRVIA+GL
Sbjct: 157 VKSLLRRPPISIEEDVSIQQAAQRMADKRVSSLLITHEDELV-GIVTDRDLRTRVIAKGL 215
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
D+ V + IMT++PI + S A EA+ KM+ HLP+ +NG+ I ++
Sbjct: 216 SYDEPV-NVIMTKDPITIDSGDFASEAVMKMMAQNVHHLPITKNGKAIGVI 265
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
K +TI GT+VSDA R +A RR+ +++++ + GI++++DI + G
Sbjct: 13 DKVITIKPGTLVSDAARILAERRIGGLVVSEDGKQIQGILSERDIVRSLAVRGATCLSDR 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--M 176
+ +MTRNP+ + + L +M +G+FRH+PVVE+GE++ I+ I + +S M
Sbjct: 73 IDDMMTRNPVCCARGDTSDQVLTRMTEGRFRHMPVVEDGELVGIVTIGDVVSSRLSELAM 132
Query: 177 EKAAEQG 183
EK A QG
Sbjct: 133 EKDALQG 139
>gi|372486716|ref|YP_005026281.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
gi|359353269|gb|AEV24440.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
Length = 143
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +AC+RMA+ RV A+L+ + + L+GI T++D RV+A GL P+ T++S++MT NP
Sbjct: 24 VREACQRMAAARVGALLVVE-HGFLTGIFTERDALNRVLAPGLDPEHTLLSEVMTANPRA 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAA 189
V + AL M G +RH+PVV+ G + ++ + L I E+ E IA A
Sbjct: 83 VPPEKPLSYALHLMHIGGYRHMPVVQAGRPLGMVSVRDALGAEICDFERDLESLEKIATA 142
Query: 190 V 190
+
Sbjct: 143 L 143
>gi|357464825|ref|XP_003602694.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
gi|355491742|gb|AES72945.1| Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago
truncatula]
Length = 293
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M RV + ++ N + GI+T KDI RV+A L P+ T+V K+MT NP T ++
Sbjct: 1 MQELRVSSSVIVTENKI-QGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTI 59
Query: 137 IEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVER 195
I+AL M GKF HLPVV+ +G V+A +D+ + + AIS +E ++ G+ A +++
Sbjct: 60 IDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLVESSS-SGNVNDVASTIMQK 118
Query: 196 QWGSNFS 202
W S F+
Sbjct: 119 FWDSAFA 125
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
M+E R +S++IVT +KIQGILTSKD+LMRV+A NLSPE TLVE+ +
Sbjct: 1 MQELRVSSSVIVTENKIQGILTSKDILMRVMAPNLSPESTLVEKVM 46
>gi|152998333|ref|YP_001343168.1| hypothetical protein Mmwyl1_4338 [Marinomonas sp. MWYL1]
gi|150839257|gb|ABR73233.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas sp. MWYL1]
Length = 618
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + MA RV ++L+TD + L+ GIVTD+D+ TR +AEGL D T +S+IMTR+PI
Sbjct: 170 IRNAAQIMAEHRVSSLLITDKDELI-GIVTDRDLRTRAVAEGLAYD-TPISEIMTRDPIV 227
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ S A EA+ KM+ H+P+V+NG I ++
Sbjct: 228 MDSGDYASEAVLKMMDRNVHHIPIVKNGRPIGVV 261
>gi|237654199|ref|YP_002890513.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237625446|gb|ACR02136.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 140
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V ACR M R V AVL+TDA A L GI T +D +VIA G P + +S++MT P
Sbjct: 24 VQTACRSMCERSVGAVLVTDARAHLKGIFTGRD-AVQVIANGGDPAKVQLSEVMTAKPDT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ + AI+AL M G +RHLPVV +G+V+ I+
Sbjct: 83 IDPEHKAIDALHMMCDGGYRHLPVVVDGKVVGIV 116
>gi|220925558|ref|YP_002500860.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219950165|gb|ACL60557.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 156
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 51 RTVKKLRLSKAL--TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
R+V +L + +L T E TI ++ CRR+ V A+ + + L+ GI++++D+ +RVI
Sbjct: 4 RSVGELAMRHSLHSTTCEATI-TEVCRRLQDHHVGALAVLEDGKLV-GIISERDVISRVI 61
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
A G P T V +MT +P + ++ I+ALQKM+ G+FRHLPV+ EVI ++
Sbjct: 62 AVGREPTATTVRAVMTPDPQTIDCENYLIDALQKMLDGQFRHLPVMRGDEVIRMI 116
>gi|358637076|dbj|BAL24373.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 143
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRMA +V A+++T L+GI T++D +V+A G+ PD+T ++++MT +P
Sbjct: 23 VREATRRMADAKVGAIMITAKGGKLAGIFTERDALVKVLANGVDPDKTTLAQVMTSDPTT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENG 157
+D AL M G FRH+PVV+NG
Sbjct: 83 ANADKNLGYALHMMYDGGFRHVPVVDNG 110
>gi|358635153|dbj|BAL22450.1| putative signal transduction protein containing CBS domains
[Azoarcus sp. KH32C]
Length = 140
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPD 115
+R + L +P V ACRRM R AVL+ D L GI T +D R++ + PD
Sbjct: 10 IRNQELLMLPPDASVRRACRRMCERHFGAVLVADRAHRLLGIFTGRD-AVRLLGDQHNPD 68
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ +MT P+ + D+ AI+AL+ M G FRHLPVV +G+V+ ++
Sbjct: 69 SARLDSVMTPAPVTIAPDAHAIDALRLMSDGGFRHLPVVADGKVVGLV 116
>gi|226491131|ref|NP_001145822.1| uncharacterized protein LOC100279329 [Zea mays]
gi|219884563|gb|ACL52656.1| unknown [Zea mays]
Length = 306
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T +DI RVIA+ L P+ T V K+MT++P T D+ ++AL M GKF HLPV++
Sbjct: 27 GILTSRDILMRVIAQNLPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLD 86
Query: 156 -NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFS 202
+G V+ ++D+ + AI+ + + GS +A+ ++R W S S
Sbjct: 87 RDGNVVTVVDVLHITHAAIATVGNSGAAGSEATSAM--MQRFWDSAMS 132
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
V A+KKM E + +SA++ +K GILTS+D+LMRV+AQNL PE T VE+ +
Sbjct: 2 VLTASKKMLELKVSSAVVAIENKPGGILTSRDILMRVIAQNLPPESTTVEKVM 54
>gi|383936436|ref|ZP_09989862.1| hypothetical protein RNAN_2966 [Rheinheimera nanhaiensis E407-8]
gi|383702500|dbj|GAB59953.1| hypothetical protein RNAN_2966 [Rheinheimera nanhaiensis E407-8]
Length = 608
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 19/139 (13%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE + V DA R M+ +RV ++L+ + + L+ GI+TD+D+ RV+A L P T +S++MT
Sbjct: 158 PEQS-VQDAARLMSEQRVSSLLVEEQDKLV-GIITDRDLRNRVLAHAL-PASTQISQVMT 214
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD---------- 171
R P + + EA+Q+M Q HLPV+E+G A+L DI + D
Sbjct: 215 RQPQHIDRHAYLYEAVQQMSQHNIHHLPVMEHGVCCAMLTATDIIRSQQDHPVYLIGEIH 274
Query: 172 ---AISRMEKAAEQGSAIA 187
++ +E+ ++Q SA+A
Sbjct: 275 RQTSVDGLERCSQQISALA 293
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTI ++ +A R+M +V A+++ D+N L GI T++D +V +GL Q++V +
Sbjct: 98 LTINSDQLIIEALRKMTQNKVGAIMVLDSNGQLEGIFTERDYVGKVALQGLSSRQSLVKE 157
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV--ENGEV---IAILDITKCLYD 171
+MTR +++DS ++ + M +FRHLPVV E+ +V ++I D+ + ++D
Sbjct: 158 VMTRGVKTISADSCVVDTMHIMTNQRFRHLPVVDKESNKVLGMVSIQDLIRSVHD 212
>gi|157374890|ref|YP_001473490.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
gi|157317264|gb|ABV36362.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
Length = 615
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
L I VSDA R+M S RV +VL+ D N L SGI+TD+D+ RV+AEGL V +
Sbjct: 161 LVIDVNATVSDAARKMRSTRVSSVLVIDNNKL-SGILTDRDLRNRVLAEGLE-GSLPVHQ 218
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT P +TS+SL EA+ M + HLP+V++ + +L T L
Sbjct: 219 AMTTKPKTLTSNSLVFEAMLLMSEHSIHHLPIVDDERAVGVLTSTDIL 266
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Query: 195 RQWGSNFSAPYAFIETLRERM-FKPSLSTIITENAKVAIVSPSDPVAV--------AAKK 245
RQ+ F+ AF + LR + FK + +T +V+ + DP+ + AA+K
Sbjct: 121 RQFDRFFNR--AFAKRLRHQTRFK---AKELTTTNRVSSLMSGDPLVIDVNATVSDAARK 175
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
MR R +S L++ +K+ GILT +D+ RV+A+ L L
Sbjct: 176 MRSTRVSSVLVIDNNKLSGILTDRDLRNRVLAEGLEGSL 214
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R M RR+ AV + + L GI T++D+ RV+ L P T V ++MT +P T D
Sbjct: 29 RLMTERRIGAVPVVGPDGALVGIFTERDVMCRVVDRDLDPATTPVGQVMTASPKTATPDW 88
Query: 135 LAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
++AL+ M G +RHLPVV+NG+++AI+ I + LY A++
Sbjct: 89 PILKALEHMADGGYRHLPVVDNGKLLAIVSI-RDLYAAVT 127
>gi|51244818|ref|YP_064702.1| hypothetical protein DP0966 [Desulfotalea psychrophila LSv54]
gi|50875855|emb|CAG35695.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 625
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Query: 43 SVGGAGGERTVKK---LRLSKALTIPEGTIVSDACRRMASRRVDAVLLT------DANAL 93
S A + T K L +A+ I + A R MA+ V A+L++ + +
Sbjct: 139 STSNAASDLTTSKVVTLLTREAVMIAHDQTIQQAARTMAAENVSAILISPPENTSEDDEP 198
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
+GI+TD+D+ +RV+AEG+ D T VSK+M+ + IF+ S++ EA+ M++ HLPV
Sbjct: 199 FAGIITDRDLCSRVLAEGVSSD-TAVSKVMSTDLIFLDSNAYVFEAMLTMLRNNIHHLPV 257
Query: 154 VENGEVIAILDIT 166
+ N I I++IT
Sbjct: 258 LRNKTPIGIIEIT 270
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA MA R++ AV++ D NA L+GI T++D+ RV+A+GL +SK+MT +P
Sbjct: 24 VMDAVTMMAERKIGAVIIVDNNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTADPDT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
+ + A+ AL M ++RHLPVV+ +V+ ++ I + L++ + R
Sbjct: 84 LGPNDSAMSALDLMSARRYRHLPVVDGDKVVGMVSI-RDLFNVVKR 128
>gi|358636709|dbj|BAL24006.1| putative signal transduction protein with CBS domains [Azoarcus sp.
KH32C]
Length = 140
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
L +P V AC RM R V AVL+ D L GI T +D R++ T +
Sbjct: 16 LMLPPDASVKLACERMCDRHVGAVLVADRAHHLLGIFTGRD-AVRMLGNEADAAHTKLDD 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+MT P+ + D+ AI+AL+ M G FRHLPVV NG+V+AI+
Sbjct: 75 VMTHKPVTIPPDAHAIDALRLMNDGGFRHLPVVRNGKVVAIV 116
>gi|358446979|ref|ZP_09157516.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607076|emb|CCE55869.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 618
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ ++++K + P + +A +RM V ++L+ + + LL GI+TD+D+ RV+A+G+
Sbjct: 154 IHDVKIAKPRSCPPDLSIREAAQRMEEYSVSSLLVIEGDDLL-GIITDRDMRGRVVAQGV 212
Query: 113 ---RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DIT 166
RP V+ +MT++ + + SDSLA+EAL M + K HLPVV+ G V I+ DI
Sbjct: 213 DTARP----VADVMTKDLLTLGSDSLAMEALMYMSERKIHHLPVVDKGTVTGIVTQNDIA 268
Query: 167 KCLYD 171
+ L++
Sbjct: 269 RLLHN 273
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ ++++K + P + +A +RM V ++L+ D + LL GI+TD+D+ RV+AEG+
Sbjct: 154 IHDVKIAKPRSCPPDLSIREAAQRMEEYNVSSLLVLDRDTLL-GIITDRDLRGRVVAEGI 212
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
VS +MT + ++S+SLA+EAL M + K HLPVV+ G V I+ DI + L
Sbjct: 213 ET-TCPVSDVMTTKLLTLSSESLAMEALMLMSERKIHHLPVVDEGTVTGIVTQNDIARLL 271
Query: 170 YD 171
++
Sbjct: 272 HN 273
>gi|374293104|ref|YP_005040139.1| hypothetical protein AZOLI_2737 [Azospirillum lipoferum 4B]
gi|357425043|emb|CBS87924.1| conserved protein of unknown function; CBS domain [Azospirillum
lipoferum 4B]
Length = 160
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ +PE T V+ + MA + + AVL+ D AL+ GIVT++D+ +V+++ L P V
Sbjct: 40 ILVPEDTSVATVSKMMADKNIGAVLVVDHGALI-GIVTERDLNNKVLSKDLDPSAVEVGA 98
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAI 173
+MTRNP + D+ A++AL+ M +RHLP+ + +++I D+ K Y+ +
Sbjct: 99 VMTRNPDSLPPDADAVDALKLMHDKHYRHLPITQGKRAVGIVSIRDLFKVAYEHM 153
>gi|403718753|ref|ZP_10943476.1| hypothetical protein KILIM_107_00040 [Kineosphaera limosa NBRC
100340]
gi|403208309|dbj|GAB98159.1| hypothetical protein KILIM_107_00040 [Kineosphaera limosa NBRC
100340]
Length = 621
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ DA R MA+R V +VL+ N +L GIVTD+D+ RV+A G ++ S +MT +PI
Sbjct: 174 IRDAARMMANRDVSSVLVMSGNRIL-GIVTDRDLRKRVVAAGADTSASIAS-VMTPDPIV 231
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
V+ ++LA E L M+ G HLP+VE G + ++ T + R+E A
Sbjct: 232 VSGEALAFEVLLHMMDGAIHHLPIVEAGRPVGVITSTDLV-----RLEHA 276
>gi|386742225|ref|YP_006215404.1| cyclic nucleotide binding protein/2 CBS domains [Providencia
stuartii MRSN 2154]
gi|384478918|gb|AFH92713.1| cyclic nucleotide binding protein/2 CBS domains [Providencia
stuartii MRSN 2154]
Length = 623
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ I GT V DA + M + + L+ D LL GI+TD+D+T RV+A GL +T VSK
Sbjct: 166 VVITPGTSVQDAAQEMVRKHRSSALVMDGETLL-GIITDRDLTKRVVALGL-DIKTPVSK 223
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL----YDAISRME 177
+MT NPI + +++ I A++ M+Q R LPV+ N + +L T + A+ +
Sbjct: 224 VMTENPITIAANAPIINAIELMMQHNIRSLPVMTNHRITGVLTATSLVQKNSMQAVYLIS 283
Query: 178 KAAEQGSAIAAAVEGVERQ 196
+ Q S + GV+RQ
Sbjct: 284 RIYRQESLAELKMLGVQRQ 302
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 226 ENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
EN + +++P V AA++M +SAL++ G + GI+T +D+ RVVA L
Sbjct: 161 ENGNIVVITPGTSVQDAAQEMVRKHRSSALVMDGETLLGIITDRDLTKRVVALGL 215
>gi|183599960|ref|ZP_02961453.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
gi|188022235|gb|EDU60275.1| CBS domain protein [Providencia stuartii ATCC 25827]
Length = 623
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ I GT V DA + M + + L+ D LL GI+TD+D+T RV+A GL +T VSK
Sbjct: 166 VVITPGTSVQDAAQEMVRKHRSSALVMDGETLL-GIITDRDLTKRVVALGL-DIKTPVSK 223
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL----YDAISRME 177
+MT NPI + +++ I A++ M+Q R LPV+ N + +L T + A+ +
Sbjct: 224 VMTENPITIAANAPIINAIELMMQHNIRSLPVMTNHRITGVLTATSLVQKNSMQAVYLIS 283
Query: 178 KAAEQGSAIAAAVEGVERQ 196
+ Q S + G++RQ
Sbjct: 284 RIYRQESLAELKMLGIQRQ 302
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 226 ENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
EN + +++P V AA++M +SAL++ G + GI+T +D+ RVVA L
Sbjct: 161 ENGNIVVITPGTSVQDAAQEMVRKHRSSALVMDGETLLGIITDRDLTKRVVALGL 215
>gi|429729721|ref|ZP_19264378.1| CBS domain protein [Corynebacterium durum F0235]
gi|429149115|gb|EKX92105.1| CBS domain protein [Corynebacterium durum F0235]
Length = 618
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV-VSK 121
T+ T + DA R M R V ++L++ + L GIVTD+D+ RV+A + D T+ V++
Sbjct: 163 TVTPDTTIQDAARIMEDRNVSSLLVS-QDGGLEGIVTDRDMRGRVVANNM--DVTLPVTE 219
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-YDAI 173
IMT NP VTSDSLA EA+ M + HLPVV+ G V I+ DI + L +D I
Sbjct: 220 IMTPNPRAVTSDSLAFEAMLIMADMRIHHLPVVDEGAVTGIIASADIMRLLRHDPI 275
>gi|398809835|ref|ZP_10568676.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398084927|gb|EJL75598.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 145
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 14/142 (9%)
Query: 49 GERTVKKLRLSKALTI---PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITT 105
ERTV + +S+A + P+ ++ AC M +VL+ + L GI+T++D+ T
Sbjct: 2 AERTVFQ-SISRAHVVSLGPQASVRDAACV-MTRASCGSVLVMELPDTLLGILTERDLMT 59
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
RV+A GL PD T V ++MT NPI V ++L +A+ M++ FRHLP+V +V+ + +
Sbjct: 60 RVLARGLDPDHTAVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPLVAGAKVLGVFSV 119
Query: 166 TKCLYDAISRMEKAAEQGSAIA 187
DA+ R E G+A++
Sbjct: 120 ----RDALPR-----EIGAAVS 132
>gi|451944038|ref|YP_007464674.1| signal transduction protein [Corynebacterium halotolerans YIM 70093
= DSM 44683]
gi|451903425|gb|AGF72312.1| signal transduction protein [Corynebacterium halotolerans YIM 70093
= DSM 44683]
Length = 617
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + DA R M V ++L+ + L GIVTD+D+ RV+A GL D V S+IMT +P
Sbjct: 168 TSIRDAARMMEESNVSSLLIIEDGGL-RGIVTDRDLRGRVVATGLGIDLPV-SEIMTPDP 225
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-YDAI 173
V+SDSLA EA+ M + HLP+V++GEV I+ DI + L +D I
Sbjct: 226 RTVSSDSLAFEAMLFMAELSIHHLPIVDDGEVTGIVTTADIMRLLRHDPI 275
>gi|336315596|ref|ZP_08570505.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
gi|335880055|gb|EGM77945.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
Length = 606
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+ ++I V A M +RV + LL + + L GI+TD+D+ +RV+A+ L P T V
Sbjct: 150 RKVSIASSNTVQQAALLMTEQRV-SCLLIEQDEQLVGILTDRDLRSRVVAKSL-PASTTV 207
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
S++MT+ P + +D A EA+Q+M Q HLPV ++G+ I +L T
Sbjct: 208 SEVMTKTPQSIETDRFAFEAIQQMSQYNIHHLPVEQDGKAIGVLTTT 254
>gi|336124152|ref|YP_004566200.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio anguillarum
775]
gi|335341875|gb|AEH33158.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio anguillarum
775]
Length = 626
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 40 SSSSVGGAGGE----RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS 95
+ SSV AG E + VK++ + T+V +A + M + + L+ D N L
Sbjct: 143 AHSSVKWAGEEMLYLKRVKEVMNRSVAKVHSDTLVQEAAQIMVNSHRSSALVMD-NDQLV 201
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G+VTD+D+T RVIA GL + T +S+IMT++P + SD+L +EA++ M+ R LPV+E
Sbjct: 202 GVVTDRDMTKRVIAAGLMLN-TPISQIMTQHPQTIQSDALLLEAMEMMMLHNVRSLPVLE 260
Query: 156 NGEVIAILDIT 166
+V+ +L T
Sbjct: 261 GEQVVGVLTAT 271
>gi|392383232|ref|YP_005032429.1| CBS domain [Azospirillum brasilense Sp245]
gi|356878197|emb|CCC99067.1| CBS domain [Azospirillum brasilense Sp245]
Length = 146
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDA-NALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ +++P G V DA R+M + V ++++T + N + GI T++D+T RV+A+GL PDQT
Sbjct: 14 RVVSLPAGASVRDAARQMKAAHVASIVVTASINEQIEGIFTERDLTDRVVADGLDPDQTR 73
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLP 152
+S++MT P+ D EAL++M RHLP
Sbjct: 74 LSEVMTPCPVTAAHDITVGEALRRMADHGLRHLP 107
>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 140
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K LT P T VSDA R MA R V AVL+ A+ L GI T++D RVIA+G + T +
Sbjct: 14 KFLTAPPETTVSDAARLMADRNVGAVLVV-ADEHLLGIFTERDAVFRVIAKGRDANTTQL 72
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL--------DITKCLYD 171
+++MT +P + AL M + FRH+PVVENG + I+ D+ + +++
Sbjct: 73 TEVMTVDPKTLEPGKTYGHALLIMQENGFRHVPVVENGRPVGIISSRNAMDPDLEEYVFE 132
Query: 172 AISR 175
A R
Sbjct: 133 ARRR 136
>gi|212556278|gb|ACJ28732.1| Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase
DUF294 [Shewanella piezotolerans WP3]
Length = 615
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTI +SDA R M RV +VL+ D N L GI+TDKD+ RV+AEGL V +
Sbjct: 161 LTIDMKATISDAARLMRKSRVSSVLVID-NEKLVGILTDKDLRNRVLAEGL-DGSLAVHQ 218
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT PI + S+SL EA+ M + HLPVV+ G I+ T L
Sbjct: 219 AMTTTPISIESNSLVFEAMLLMSEHNIHHLPVVDCGLAKGIITSTDIL 266
>gi|260773740|ref|ZP_05882655.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
gi|260610701|gb|EEX35905.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
Length = 619
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 40 SSSSVGGAGGE----RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS 95
+ SSV AG E + VK++ + T+V +A + M + + L+ D N L
Sbjct: 136 AHSSVKWAGEEMLYLKRVKEVMNRSVAKVHTDTLVQEAAQIMVNSHRSSALVMD-NDQLV 194
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G+VTD+D+T RVIA GL + T +S+IMT++P + SD+L +EA++ M+ R LPV+E
Sbjct: 195 GVVTDRDMTKRVIAAGLTLN-TPISQIMTQHPQTIQSDALLLEAMEMMMLHNVRSLPVLE 253
Query: 156 NGEVIAILDIT 166
+V+ +L T
Sbjct: 254 GEQVVGVLTAT 264
>gi|417859832|ref|ZP_12504888.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
gi|338822896|gb|EGP56864.1| hypothetical protein Agau_C200900 [Agrobacterium tumefaciens F2]
Length = 144
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ G + +A + + ++ A+++TDA+ ++ GI T++D+ V +G Q +VS
Sbjct: 17 VTVGPGVTIGEAAGTLHAHKIGALVVTDADGVVLGIFTERDLVKAVAGQGAASLQQLVSV 76
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
MTRN I +S E ++ M G+FRH+PV ENG + I+ I + I +E AE
Sbjct: 77 AMTRNVIRCHHNSTTDELMEIMTGGRFRHIPVEENGRLAGIISIGDVVKARIGEIELEAE 136
Query: 182 Q 182
Sbjct: 137 H 137
>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
Length = 143
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K LT E V +A RRM V ++++ + LSGI T++D RVIA G P +T +
Sbjct: 14 KILTADEHMTVLEASRRMTDLHVGSIMIVH-DGHLSGIFTERDALVRVIAAGRDPARTRL 72
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
S++MTR+P ++SD A+ M +G FRH+PV + G I ++ L + E+
Sbjct: 73 SEVMTRDPQSISSDRPLGHAMHLMYEGGFRHVPVTDCGRPIGMISARDALGLEMVAFEEE 132
Query: 180 AEQ 182
EQ
Sbjct: 133 LEQ 135
>gi|89901569|ref|YP_524040.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89346306|gb|ABD70509.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 146
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+P+ ++ AC M ++L+ DA +L GI+T++D+ TRV+A+ L P T+ S +M
Sbjct: 19 LPQASVWDAACI-MTKANCGSILVIDAAGVLQGILTERDLMTRVLAKALNPQTTLASDVM 77
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQ 182
TRNP V D +A+ M++ FRHLP++ G+++ + I DA+ R E
Sbjct: 78 TRNPQSVGPDMRVADAVVIMIERGFRHLPIINTAGKILGVFSI----RDAMPR-----EI 128
Query: 183 GSAIAAA 189
G+A++ A
Sbjct: 129 GNAVSLA 135
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA M R++ AV++ D NA L+GI T++D+ RV+A+GL T + ++MT NP
Sbjct: 24 VMDAVNMMTERKIGAVIIVDNNARLAGIFTERDLVNRVVAKGLDAASTPLKQVMTANPDT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAI 173
+ A+ AL+ M ++RHLPV++ V+ ++ I + L++ +
Sbjct: 84 LAPGDTAMNALELMSARRYRHLPVLDGENVVGMVSI-RDLFNVV 126
>gi|114562724|ref|YP_750237.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
400]
gi|114334017|gb|ABI71399.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
400]
Length = 615
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S+ + I V DA + M RV +VL+ D N L+GI+TD+D+ R+IAEGL + T+
Sbjct: 158 SQPIIIDAHASVMDAAKLMREHRVSSVLVID-NQKLTGILTDRDLRNRIIAEGLDVN-TL 215
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
VS+ MT NP+ +++L EA+ M + HLPVV+ + ++ T L
Sbjct: 216 VSQAMTINPVTTHANALVFEAMLAMSEHNIHHLPVVDGSRALGMITSTDIL 266
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 224 ITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALIVTGSKIQGILTSKDVLMRV 275
+T +++ + S P+ + AAK MRE R +S L++ K+ GILT +D+ R+
Sbjct: 146 LTTTSRITSIMSSQPIIIDAHASVMDAAKLMREHRVSSVLVIDNQKLTGILTDRDLRNRI 205
Query: 276 VAQNL 280
+A+ L
Sbjct: 206 IAEGL 210
>gi|88703627|ref|ZP_01101343.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
KT71]
gi|88702341|gb|EAQ99444.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
KT71]
Length = 623
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT+P V +A MA RRV + + A+ L GI+TD+D+ TRV+A GL + V ++
Sbjct: 168 LTVPSTATVREAAMAMAERRVSSAFVV-ADDELQGILTDRDLRTRVLARGLSSEMPV-NE 225
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY----DAISRME 177
+MT NP + SD M Q +F HLPV+E G + I+ + + D + ++
Sbjct: 226 VMTPNPEAIASDETLFATTLMMTQRRFHHLPVLEEGRLAGIVTTSDLIVAKKNDPVYLVQ 285
Query: 178 KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIIT 225
+ Q S VEG++ GS + +E + M P +S I+T
Sbjct: 286 HISRQDS-----VEGIQELVGSMGN---LMVEWVSGGMRAPQVSQILT 325
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 215 MFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMR 274
M P +S+++T + + V + V AA M E R +SA +V ++QGILT +D+ R
Sbjct: 155 MLAP-VSSVMTRD--ILTVPSTATVREAAMAMAERRVSSAFVVADDELQGILTDRDLRTR 211
Query: 275 VVAQNLSPELTLVE 288
V+A+ LS E+ + E
Sbjct: 212 VLARGLSSEMPVNE 225
>gi|319793129|ref|YP_004154769.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315595592|gb|ADU36658.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 145
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA M +VL+ + L GI+T++D+ TRV+A+GL PD+T V ++MT NPI
Sbjct: 24 VRDAACVMTRANCGSVLVMELPDTLLGILTERDLMTRVLAKGLDPDRTPVREVMTPNPIC 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIA 187
V ++L +A+ M++ FRHLP+V +++ + + DA+ R E G+A++
Sbjct: 84 VPPETLVSDAVVLMLERGFRHLPLVAGAKILGVFSV----RDALPR-----EIGTALS 132
>gi|118591263|ref|ZP_01548662.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
gi|118436339|gb|EAV42981.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
Length = 122
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 72/114 (63%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
++S+ C +A ++ AV+++D ++GIV+++DI + +G+ +T VS +MT+ +
Sbjct: 1 MLSEICETLAKHKIGAVVVSDDEGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMTKTVV 60
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
T ++ E + +M QG+FRH+PV+++G++ ++ I + I+++E AEQ
Sbjct: 61 TCTEENNINEVMAQMTQGRFRHMPVLKDGKLTGVISIGDVVKFKIAQVELEAEQ 114
>gi|312136468|ref|YP_004003805.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224187|gb|ADP77043.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 267
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA--- 109
+K L + +TI + +++A + M +V ++L+ D N L GIVT+KDI ++++
Sbjct: 3 IKYLMSTNPVTINKNKNIAEALKSMEKNKVSSLLVVDNNKKLVGIVTEKDIAGKLLSSKY 62
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI------L 163
E L P VS MT++PI V+ + +A M++ + +LPVVENGE++ I L
Sbjct: 63 ENLPPSHIYVSTAMTKDPITVSPNITVGKAADIMLENRISNLPVVENGELVGIITKTDLL 122
Query: 164 DITKC 168
D+ KC
Sbjct: 123 DVCKC 127
>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
Length = 144
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +TI T VS+A + +A RR+ ++++ + GI++++DI + G+
Sbjct: 13 SAVITITPTTKVSEAAQILAERRIGGLVVSRDGETVDGIISERDIVRSLAVRGVVCMTET 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISR 175
VS++MTRNP+ + + L +M G+FRH+PVVE G+++ I+ D+ K + +S
Sbjct: 73 VSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVVEAGKLVGIVTIGDVVKARLEELS- 131
Query: 176 MEKAAEQG 183
MEK A +G
Sbjct: 132 MEKTALEG 139
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +TI T VS+A + +A RR+ ++++ + GI++++DI + G+
Sbjct: 13 SAVITISPQTKVSEAAQTLAERRIGGLVVSRDGETVEGIISERDIVRSLAVRGVVCMTET 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISR 175
VS++MTRNP+ + + L +M G+FRH+PVVE G+++ I+ D+ K + ++
Sbjct: 73 VSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVVEAGKLVGIVTIGDVVKARLEELA- 131
Query: 176 MEKAAEQG 183
MEK A +G
Sbjct: 132 MEKTALEG 139
>gi|45200750|ref|NP_986320.1| AGL347Cp [Ashbya gossypii ATCC 10895]
gi|44985448|gb|AAS54144.1| AGL347Cp [Ashbya gossypii ATCC 10895]
gi|374109565|gb|AEY98470.1| FAGL347Cp [Ashbya gossypii FDAG1]
Length = 629
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 52/297 (17%)
Query: 26 NGGNL---SKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRV 82
+GG + +P S + + + G +G V L L + + E V + RR+ +
Sbjct: 7 DGGQVKRAGRPASVGRQIAMASGTSGHVLAVSALPLDRPVFCAEDEGVLEVVRRLQAEGG 66
Query: 83 DAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQK 142
L+ D + +GI+T KD+ R G ++ V ++T + V + AL+
Sbjct: 67 HCALVGDGGRV-AGIITTKDLALR--GRGSARERRV-RDVVTWGAVTVDEHAPVNAALEL 122
Query: 143 MVQGKFRHLPVVENG--EVIAILDITKCLYDAISRMEKAAEQGSAI--------AAAVEG 192
MV + RHLPV++ G EV+ +LDITKC A++ +E AA G+ + A +G
Sbjct: 123 MVVRRLRHLPVLQAGSREVLGVLDITKCFQLAMAWLEWAAVGGTRLQDVLSDVACGAADG 182
Query: 193 VERQWGSNFSAPYAFIETLRERMFKPSLSTIITEN---AKVAIVSPSDPVAVAAKKMREF 249
R G I + ++M P+L ++ +A+ SP+ V A MR
Sbjct: 183 RRRALG---------IARVVQQMEMPTLQWLLASRRYATGLAVASPTTTVREALALMRRL 233
Query: 250 RSNSALI------VTGSK-----------------IQGILTSKDVLMRVVAQNLSPE 283
+ + L+ G++ + GI TSKDV+ RV+ Q L PE
Sbjct: 234 DTTAVLVRDVEPLAAGAQGLPSPHVRPGRGADAYTVIGIFTSKDVVCRVLQQGLDPE 290
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
K L + + + E + V DA + M +RV A ++ D N ++GI +++D ++V GL P
Sbjct: 106 KNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNRMTGIFSERDYLSKVDLRGLTP 165
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+T+V IM+ I V+ DS A + L M + RHLPV++N +I +L I
Sbjct: 166 RETLVKDIMSSKVITVSGDSGASKCLSIMTKRNIRHLPVLDNKRLIGMLSI 216
>gi|110740370|dbj|BAF02080.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT NP T D +EAL M GKF HLPV
Sbjct: 19 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 78
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 79 LDKDGDVVAVIDVIHITHAAVT 100
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 38/47 (80%)
Query: 245 KMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
KM E++S++A+++ +K+ GILTSKD+LMRV++QNL E T VE+ +
Sbjct: 2 KMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKVM 48
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
++K + ++ +T+ E ++ +A R+M +++ ++L+ ++ L GI +++D ++V GL
Sbjct: 70 LEKKKDNEIVTVGEHELIINAIRKMVDKKIGSILVVNSENKLKGIFSERDYLSKVNLAGL 129
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDITKC 168
++ V ++MT+N + SD+ ++A++ M KFRHLPVV+N + V++I D+
Sbjct: 130 SSRESPVEQVMTKNVKTIKSDTCTLDAMKIMTTKKFRHLPVVDNNKHIIGVVSIQDLINS 189
Query: 169 LY 170
++
Sbjct: 190 VH 191
>gi|26450828|dbj|BAC42522.1| unknown protein [Arabidopsis thaliana]
Length = 295
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT NP T D +EAL M GKF HLPV
Sbjct: 19 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 78
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 79 LDKDGDVVAVIDVIHITHAAVT 100
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 245 KMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
KM E++S +A+++ +K+ GILTSKD+LMRV++QNL E T VE+ +
Sbjct: 2 KMVEYQSGAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKVM 48
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ +P V +A + MA RR+ A+++ D L+ GI T++D RV+AEG P+ T + +
Sbjct: 16 VALPHTATVREAAQEMAKRRIGAIVIVDDGKLM-GIFTERDGLFRVLAEGRDPENTTLDQ 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+MT + D + AL M FRH+PVV+ G+ + +L I L + K E
Sbjct: 75 VMTGKLSTIAPDRPLLHALHIMHDNGFRHMPVVQGGKPVGMLSIRDALDYELVHFVKEIE 134
Query: 182 QGSAIAAAV 190
+ A+ +
Sbjct: 135 KKEALTEII 143
>gi|91227219|ref|ZP_01261678.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
gi|91188747|gb|EAS75035.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
Length = 629
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK L +A TI G + A ++MA+ V A+L+ D + + + GI+TD+D+
Sbjct: 152 VKTLLTGEAHTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT + + ++ EA+ M++ HLPVV+N I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T+V DA R+MA + +V++ D + GI+T+ DI RV+A GL P +T+V +MT
Sbjct: 27 PDDTVV-DAARKMAKYSIGSVVVVDDKGTILGILTEGDIVRRVVARGLDPSRTLVRDVMT 85
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
NP+ + SD+ A + M + HLPVV E G ++ I+
Sbjct: 86 TNPVTIYSDATLAAAAEYMKRKGIGHLPVVNEQGRLVGII 125
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 220 LSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVAQ 278
+S ++T N V P D V AA+KM ++ S ++V I GILT D++ RVVA+
Sbjct: 14 ISDVMTPN--VITCKPDDTVVDAARKMAKYSIGSVVVVDDKGTILGILTEGDIVRRVVAR 71
Query: 279 NLSPELTLV 287
L P TLV
Sbjct: 72 GLDPSRTLV 80
>gi|407780598|ref|ZP_11127819.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
gi|407208825|gb|EKE78732.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
Length = 140
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 60/94 (63%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +AC+ M R+ A+++ D GI T +D RV+A+GL +T++S +MT P
Sbjct: 24 VLEACKIMQKHRIGAIIVVDEEKRPVGIFTGRDAVNRVLAKGLDGRRTLLSAVMTAKPDC 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
V+ D + ++AL++M +RHLPVV++G+++ ++
Sbjct: 84 VSPDWVTLDALRQMSDCGYRHLPVVKDGKIVGLV 117
>gi|167624485|ref|YP_001674779.1| hypothetical protein Shal_2564 [Shewanella halifaxensis HAW-EB4]
gi|167354507|gb|ABZ77120.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella halifaxensis HAW-EB4]
Length = 615
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L + LTI + V++A + M + RV +VL+ D N L+ GI+TDKD+ RV+AE
Sbjct: 152 VTTLMSTSPLTIDMKSTVAEASKLMRTSRVSSVLVIDNNKLV-GILTDKDLRNRVLAENF 210
Query: 113 RPDQTV-VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
D ++ V + MT P+ + S+SL EA+ M + HLPV +NG V I+ T L
Sbjct: 211 --DGSLPVHQAMTTTPVTIESNSLVFEAMLLMSEHNIHHLPVADNGVVTGIVTSTDIL 266
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
VA A+K MR R +S L++ +K+ GILT KD+ RV+A+N L
Sbjct: 169 VAEASKLMRTSRVSSVLVIDNNKLVGILTDKDLRNRVLAENFDGSL 214
>gi|379056761|ref|ZP_09847287.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Serinicoccus profundi MCCC 1A05965]
Length = 617
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V+ L + + + V++ R M V ++L+ + +AL+ GIVTD+D+ RV+A G
Sbjct: 155 SVRDLLRGEPVVVTPSATVAEGARVMTRAGVSSLLVMEGDALV-GIVTDRDLRRRVLAAG 213
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
L D T V ++MTR+P+ + + +LA+EA+ +M HLPV+E+G V+ ++ T +
Sbjct: 214 LAAD-TPVGEVMTRDPVTLPARALALEAMLEMTGRNIHHLPVLEDGRVLGLVTTTDLV 270
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 51 RTVKKLRLSKA---LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
+TVK L +K + +PE V DA + M + + AVL+ N LSGI T++D ++
Sbjct: 2 KTVKHLLDTKQPRIIAVPETISVLDALKVMTDKNISAVLVM-KNEKLSGIFTERDYARKI 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVT-SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I +G T+++++MT NPI +T SDS+ ++ M + RHLP+V N EVI +L I
Sbjct: 61 ILQGKSSKDTLINEVMTPNPITITLSDSIDY-CMELMTEKHIRHLPIVVNEEVIGMLSI 118
>gi|254228135|ref|ZP_04921564.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
gi|262393912|ref|YP_003285766.1| Signal transduction protein [Vibrio sp. Ex25]
gi|451976003|ref|ZP_21927176.1| putative nucleotidyltransferase family [Vibrio alginolyticus E0666]
gi|151939208|gb|EDN58037.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
gi|262337506|gb|ACY51301.1| Signal transduction protein [Vibrio sp. Ex25]
gi|451930034|gb|EMD77755.1| putative nucleotidyltransferase family [Vibrio alginolyticus E0666]
Length = 629
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK L A TI G + A ++MA+ V A+L+ D + + + GI+TD+D+
Sbjct: 152 VKTLLTGDAHTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT + + ++ EA+ M++ HLPVV+N I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|269967100|ref|ZP_06181168.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269828359|gb|EEZ82625.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 629
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK L A TI G + A ++MA+ V A+L+ D + + + GI+TD+D+
Sbjct: 152 VKTLLTGDAHTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT + + ++ EA+ M++ HLPVV+N I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|254501194|ref|ZP_05113345.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
gi|222437265|gb|EEE43944.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
Length = 143
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS+ +A ++ AV+L D + + GIV+++D+ V +G VS IMT++ +
Sbjct: 23 VSEIAEILAKNKIGAVVLCDGDRHIEGIVSERDVVRLVGLQGASALSQPVSSIMTKDVMT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
T A E + +M +G+FRH+PVVE+G++I ++ I + I+++E AEQ
Sbjct: 83 CTEMDAANEVMGRMNRGRFRHMPVVEDGKLIGVISIGDVVKHKIAQVEHEAEQ 135
>gi|114707952|ref|ZP_01440844.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
gi|114536581|gb|EAU39713.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
Length = 607
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+++L + +T V +A RRM + ++ +T+ + L+GIVT +D++ +V+AEGL
Sbjct: 144 IEELMVRGPITCAPDDTVQEAARRMRKHGISSLCMTE-HGKLTGIVTMRDLSGKVVAEGL 202
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
P T VS I+TRNP+ + L + L MV+ HLP+ E GE++ I+ T
Sbjct: 203 SP-ATPVSDIVTRNPVTLEPSMLGSDVLHTMVERGIGHLPICEFGELVGIVTQTN 256
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 207 FIETLRERMFKPSLSTIITENAKV---AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQ 263
F T RER + +L+ E V +P D V AA++MR+ +S + K+
Sbjct: 126 FSRTPRERPPQRTLANTRIEELMVRGPITCAPDDTVQEAARRMRKHGISSLCMTEHGKLT 185
Query: 264 GILTSKDVLMRVVAQNLSP 282
GI+T +D+ +VVA+ LSP
Sbjct: 186 GIVTMRDLSGKVVAEGLSP 204
>gi|456357013|dbj|BAM91458.1| hypothetical protein S58_54810 [Agromonas oligotrophica S58]
Length = 147
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
G +V +A R+M RV +VL+ D + +L GIVT D +V+ GL QT V ++MT +
Sbjct: 21 GDMVVEALRQMRDNRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKQTPVGQVMTGD 79
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
P+ V D + M Q FRHLPV++ G+V+ ++ I + + I +E +
Sbjct: 80 PVTVKPDHRLDSCMAMMSQRSFRHLPVLDAGKVVGVISIGDVVKNIIRDLEHNVDD 135
>gi|291279952|ref|YP_003496787.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
SSM1]
gi|290754654|dbj|BAI81031.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
SSM1]
Length = 640
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE--GLRPDQTVVSKI 122
PE T VS+ R M + + +VL+ D L GI+T++D+ T+V+A G+ T +
Sbjct: 176 PEAT-VSEIARVMTLKGIGSVLVCDGVGKLLGIITERDLVTKVLAREIGVCLRDTKAKDV 234
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT NP ++ DS EA M+ RHLPVVENG+++ I+ + L
Sbjct: 235 MTPNPFVISPDSYMYEAAAFMISHGIRHLPVVENGKILGIVTVRDLL 281
>gi|254481246|ref|ZP_05094491.1| Putative nucleotidyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214038409|gb|EEB79071.1| Putative nucleotidyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 635
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L + L + V + + MA RRV + + LL GIVTD+D+ R +A+ L
Sbjct: 171 VNTLMSTNLLMMEPSATVQETAQAMAKRRVSSAFVVKNTELL-GIVTDRDLRVRAVAKAL 229
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
P +T VS++MT NP +V A M QG+F HLPV NGE + I+
Sbjct: 230 AP-ETPVSQVMTTNPEWVEGQETIFAATLLMTQGRFHHLPVKINGETVGIV 279
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 216 FKPSLSTIITE-----NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
++P L+T++ + + + ++ PS V A+ M + R +SA +V +++ GI+T +D
Sbjct: 160 YQPELNTMMQQVNTLMSTNLLMMEPSATVQETAQAMAKRRVSSAFVVKNTELLGIVTDRD 219
Query: 271 VLMRVVAQNLSPE 283
+ +R VA+ L+PE
Sbjct: 220 LRVRAVAKALAPE 232
>gi|239820152|ref|YP_002947337.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
gi|239805005|gb|ACS22071.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 145
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA M +VL+ + +L GI+T++D+ TRV+A GL PD+T V ++MT NPI V
Sbjct: 26 DAACVMTRANCGSVLVLELPDILLGILTERDLMTRVLARGLDPDRTTVREVMTPNPICVP 85
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIA 187
++ +A+ M++ FRHLP+V +++ + + DA+ R E G+A++
Sbjct: 86 PETPVSDAVVLMLERGFRHLPLVAGTKILGVFSV----RDALPR-----ELGTAVS 132
>gi|156743854|ref|YP_001433983.1| hypothetical protein Rcas_3932 [Roseiflexus castenholzii DSM 13941]
gi|156235182|gb|ABU59965.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Roseiflexus castenholzii DSM
13941]
Length = 623
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVL-------LTDANALLSGIVTDKDITTRVIAEGLRP 114
+T+ T V +A RRM + A++ + DA SGIVTD+D+ RV+AEGL
Sbjct: 163 VTVAPDTTVREAARRMREAQASALIVDLPPYGMLDAG---SGIVTDRDLRNRVVAEGLD- 218
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
QT ++++MT I V +DSL E L KM++ HLP+ + G++I ++ L
Sbjct: 219 HQTPIAQVMTAPAITVPADSLVFEGLLKMIEHGVHHLPLSDGGQIIGVVSYRDFL 273
>gi|308126312|ref|ZP_07663708.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
gi|308106850|gb|EFO44390.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
Length = 519
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + A + MA + ++L+ D + +L GI+TD+D+
Sbjct: 42 VKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDL 101
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT I + ++ EA+ M++ HLPVV+N I I+
Sbjct: 102 CTRVLAEGLSP-QDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 160
Query: 164 DIT 166
+ T
Sbjct: 161 ETT 163
>gi|424033281|ref|ZP_17772695.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|424037998|ref|ZP_17776670.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
gi|408874863|gb|EKM14028.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408894898|gb|EKM31459.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
Length = 629
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTRDAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT I + ++ EA+ M++ HLPVV++ I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKDQMPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|28898676|ref|NP_798281.1| hypothetical protein VP1902 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364891|ref|ZP_05777462.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
gi|260898817|ref|ZP_05907258.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|417319569|ref|ZP_12106127.1| hypothetical protein VP10329_18690 [Vibrio parahaemolyticus 10329]
gi|433658011|ref|YP_007275390.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio parahaemolyticus BB22OP]
gi|28806894|dbj|BAC60165.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308086670|gb|EFO36365.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|308111605|gb|EFO49145.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
gi|328474759|gb|EGF45564.1| hypothetical protein VP10329_18690 [Vibrio parahaemolyticus 10329]
gi|432508699|gb|AGB10216.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio parahaemolyticus BB22OP]
Length = 629
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + A + MA + ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT I + ++ EA+ M++ HLPVV+N I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|315127532|ref|YP_004069535.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas sp.
SM9913]
gi|315016046|gb|ADT69384.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
[Pseudoalteromonas sp. SM9913]
Length = 612
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + ++ KA+T+P + + ++M V ++++T+ N+ L G+VTD+D
Sbjct: 141 SNNDSWSERKISEIMTRKAITLPPDASIRHSAKKMQEHGVSSIMITE-NSHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q + S IMT P F+ ++ AL M++ HLPV+ EN + +
Sbjct: 200 LRNRVLADEVDPAQAINS-IMTNKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPLG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 138 EALQKMVQGKFRHLPVVENGE------------VIAILDITKCLYDAISRMEKAAEQGSA 185
+ + ++ QG + P + G+ ++ +LD T +D + R KA EQ
Sbjct: 70 DTVTRLTQGDYFGYPSLLTGDAIQNSLEVQKEGIVYMLDQTH--FDYLRREYKAFEQYFV 127
Query: 186 IAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKK 245
A A + + SN ++ ER +S I+T K + P + +AKK
Sbjct: 128 RAHANRLLSSHYKSN-------NDSWSER----KISEIMTR--KAITLPPDASIRHSAKK 174
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
M+E +S +I S + G++T +D+ RV+A + P
Sbjct: 175 MQEHGVSSIMITENSHLVGVVTDRDLRNRVLADEVDP 211
>gi|407769372|ref|ZP_11116748.1| cyclic nucleotide-binding protein [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407287699|gb|EKF13179.1| cyclic nucleotide-binding protein [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 622
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
++I G + +A + M++ RV +L+T ++GI+TD+D+ RV+AE D+ V +
Sbjct: 165 VSIDIGASILEAGKLMSAERVSCLLITQNGDKVAGIMTDRDLRNRVVAEARSFDEPV-TN 223
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
IMT NPI + D A +AL M + RHLPV+++G+ I ++ L
Sbjct: 224 IMTPNPISIGPDDYAFDALLTMTRHNVRHLPVMKDGKAIGMITTNNLL 271
>gi|308050118|ref|YP_003913684.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Ferrimonas balearica DSM 9799]
gi|307632308|gb|ADN76610.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Ferrimonas balearica DSM 9799]
Length = 615
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + +A + M + R+ +VL+ N LL GIVTD+D+ RV+AEG+ P + VS++MT NP
Sbjct: 167 TPIQEAAQLMRASRISSVLVVQDNRLL-GIVTDRDLRNRVLAEGV-PVDSPVSEVMTANP 224
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
+ V S +L EA+ M Q HLPV ++
Sbjct: 225 VSVPSQTLVFEAMLAMSQHNIHHLPVCDD 253
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +T P V+DA R +A +R+ ++L+ + N + +GI++++DI + EG
Sbjct: 12 SAVVTAPPSMPVADAARLLAEKRIGSILILERNKV-AGILSERDIVRALANEGAGCLDGP 70
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV---IAILDITKCLYDAISR 175
VS++MT + T + +Q M G+FRH+PVV+NG+V I+I D+ K R
Sbjct: 71 VSRLMTAKVVTCTPAQTIADVMQMMTTGRFRHVPVVDNGKVAGMISIGDVVKW------R 124
Query: 176 MEKAAEQGSAIAAAVEG 192
+E+A E+ +AA V G
Sbjct: 125 LEEAQEEVRQMAAYVAG 141
>gi|119944050|ref|YP_941730.1| signal protein [Psychromonas ingrahamii 37]
gi|119862654|gb|ABM02131.1| signaling protein with a cAMP-binding site and CBS domains
[Psychromonas ingrahamii 37]
Length = 614
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 58 LSKALT-IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
+SK LT I + A M+ +R+ ++++ D L GI+TD+D+ RV+A+GL D
Sbjct: 155 MSKDLTTITADASIHQAALLMSKKRLSSLVVVDQEKL-CGILTDRDLRNRVLAKGLNGD- 212
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+V +IMT++P+ + ++L EA+ KM + HLPVV G I I+
Sbjct: 213 LLVGQIMTKDPVIIEPNALMFEAMLKMSENNIHHLPVVREGRPIGII 259
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI--AEGLR 113
++ S +T+ + + D +A + AV++ D N + GI++++DI + AEG R
Sbjct: 9 IKGSDVVTVRSDSTIGDLIATLARHNIGAVVVVD-NGKVEGIISERDIVRHLAGSAEGFR 67
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAI 173
VS +MTR P T +A+ M QG+FRHLPVVENG++I I+ I D +
Sbjct: 68 AKP--VSTLMTRAPKTCTKSDTVDQAMNIMSQGRFRHLPVVENGQLIGIISIG----DVV 121
Query: 174 SRMEKAAEQ 182
R + AEQ
Sbjct: 122 KRKIEEAEQ 130
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
L + + + E V +A + M ++V A ++ D N + GI +++D ++V GL P +T
Sbjct: 96 LGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNRMCGIFSERDYLSKVDLRGLSPKET 155
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+V + T+ I V+SDS A + L M + RHLPV+EN ++ +L I
Sbjct: 156 LVKDVCTKQIITVSSDSGATKCLSIMSKRNIRHLPVIENKRLLGMLSI 203
>gi|308094796|ref|ZP_07663052.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
gi|308093340|gb|EFO43035.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
Length = 357
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + A + MA + ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT I + ++ EA+ M++ HLPVV+N I I+
Sbjct: 212 CTRVLAEGLSP-QDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVVKNQLPIGII 270
Query: 164 DITKCL 169
+ T +
Sbjct: 271 ETTDIV 276
>gi|359437345|ref|ZP_09227413.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20311]
gi|359444787|ref|ZP_09234554.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20439]
gi|358028011|dbj|GAA63662.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20311]
gi|358041356|dbj|GAA70803.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20439]
Length = 612
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + ++ KA+T+P + ++ ++M + ++++T+ N+ L G+VTD+D
Sbjct: 141 SNNDSWSERKISEIMTRKAITLPPDASIRNSAKKMQEHGISSMMITE-NSHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q + S IMT P F+ ++ AL M++ HLPV+ EN + +
Sbjct: 200 LRNRVLADEVDPAQAINS-IMTNKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPLG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 138 EALQKMVQGKFRHLPVVENGE------------VIAILDITKCLYDAISRMEKAAEQGSA 185
+ + ++ QG + P + G+ ++ +L+ T +D + R KA EQ
Sbjct: 70 DTVTRLTQGDYFGYPSLLTGDSIQNSLEVQKEGIVYMLEQTD--FDYLRREYKAFEQYFV 127
Query: 186 IAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKK 245
A A + + SN ++ ER +S I+T K + P + +AKK
Sbjct: 128 RAHANRLLSSHYKSN-------NDSWSER----KISEIMTR--KAITLPPDASIRNSAKK 174
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
M+E +S +I S + G++T +D+ RV+A + P
Sbjct: 175 MQEHGISSMMITENSHLVGVVTDRDLRNRVLADEVDP 211
>gi|407773467|ref|ZP_11120768.1| cyclic nucleotide-binding protein [Thalassospira profundimaris
WP0211]
gi|407283931|gb|EKF09459.1| cyclic nucleotide-binding protein [Thalassospira profundimaris
WP0211]
Length = 622
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + M+ RV +L+T+ ++GI+TD+D+ RVIA+G D+ V + IMT PI
Sbjct: 173 ILEAGQLMSKERVSCLLITEGGDGVAGIMTDRDLRNRVIAKGRSYDEPVTA-IMTEKPIS 231
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ D A +AL M + RHLPV+++G+ + ++ L
Sbjct: 232 IDPDQYAFDALLTMTRNNIRHLPVMKDGKAVGMITTNNLL 271
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE ++ DA + MA R+ A+L+ L+ G+++++D +VI +G QT VS IM+
Sbjct: 20 PEAPVL-DAIKHMAEHRIGALLVMRGEQLV-GVMSERDYARKVILQGRSSSQTAVSDIMS 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDA 172
+P+ V+ D+ E ++ + RHLPVV++G+V+ ++ D+ K + DA
Sbjct: 78 GSPLTVSPDTDVFECMRLCTDSRVRHLPVVQDGKVVGVISIGDLVKAVIDA 128
>gi|288939928|ref|YP_003442168.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
gi|288895300|gb|ADC61136.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
Length = 621
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T PE T + DA R M+ V ++L+ D L +G++TD+D+ R +A GL DQ V + I
Sbjct: 167 TRPE-TSIRDAARIMSEHHVSSLLIMDGEHL-AGMITDRDLRNRCVAAGLATDQPVRA-I 223
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
MT V D+L +AL M + HLPVVENG V+ ++ T
Sbjct: 224 MTEKLTTVDMDTLGFQALIAMTRLNVHHLPVVENGRVVGLISST 267
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G R + + + +K +++ + V A M + V A+++ D N +G+ T++D +V
Sbjct: 2 GTVRHILQKKGNKVISVAPTSTVYSALETMVEQNVGALIVMD-NGKFAGMFTERDYARKV 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---D 164
I +G T+V +IM+ +P+ VT D+ + ++ M Q RHLPV +N E+I ++ D
Sbjct: 61 ILKGKASRDTLVQEIMSEHPVTVTPDTTLEQCMKLMTQKYIRHLPVFDNQELIGLVSIGD 120
Query: 165 ITKCLYD 171
I KC+ D
Sbjct: 121 IVKCMMD 127
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G R++ +L+ + TI V DA + + + A+++ D N GI T++D +V
Sbjct: 2 GKVRSILQLKGNAVFTISPSHTVYDALELLVEKNIGALMVVD-NERFVGIFTERDYARKV 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF-RHLPVVENGE---VIAIL 163
I +G +T++ +IMT P+ VT D +IE K++ KF RHLPVVEN + +I+I
Sbjct: 61 ILKGRSSKETLIGEIMTSTPVSVTIDD-SIEHCMKLMTNKFIRHLPVVENDKLAGLISIG 119
Query: 164 DITKCLYD 171
D+ K + D
Sbjct: 120 DVVKYIID 127
>gi|297578876|ref|ZP_06940804.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536470|gb|EFH75303.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 637
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|229515667|ref|ZP_04405126.1| hypothetical protein VCB_003325 [Vibrio cholerae TMA 21]
gi|229347436|gb|EEO12396.1| hypothetical protein VCB_003325 [Vibrio cholerae TMA 21]
Length = 637
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|227081462|ref|YP_002810013.1| hypothetical protein VCM66_1246 [Vibrio cholerae M66-2]
gi|227009350|gb|ACP05562.1| conserved hypothetical protein [Vibrio cholerae M66-2]
Length = 574
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 97 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 156
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 157 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 215
Query: 164 DIT 166
D+T
Sbjct: 216 DMT 218
>gi|422922597|ref|ZP_16955780.1| cyclic nucleotide-binding domain protein [Vibrio cholerae BJG-01]
gi|341645742|gb|EGS69870.1| cyclic nucleotide-binding domain protein [Vibrio cholerae BJG-01]
Length = 629
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|429885568|ref|ZP_19367153.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio cholerae PS15]
gi|429227685|gb|EKY33674.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio cholerae PS15]
Length = 629
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|262190276|ref|ZP_06048546.1| Signal transduction protein [Vibrio cholerae CT 5369-93]
gi|262033842|gb|EEY52312.1| Signal transduction protein [Vibrio cholerae CT 5369-93]
Length = 629
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|15641304|ref|NP_230936.1| hypothetical protein VC1291 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586543|ref|ZP_01676329.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121728835|ref|ZP_01681846.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153819757|ref|ZP_01972424.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|229505122|ref|ZP_04394632.1| hypothetical protein VCF_000328 [Vibrio cholerae BX 330286]
gi|229511207|ref|ZP_04400686.1| hypothetical protein VCE_002614 [Vibrio cholerae B33]
gi|229518326|ref|ZP_04407770.1| hypothetical protein VCC_002350 [Vibrio cholerae RC9]
gi|229608141|ref|YP_002878789.1| hypothetical protein VCD_003059 [Vibrio cholerae MJ-1236]
gi|254848415|ref|ZP_05237765.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|9655778|gb|AAF94450.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549222|gb|EAX59254.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121628882|gb|EAX61339.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126509704|gb|EAZ72298.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|229345041|gb|EEO10015.1| hypothetical protein VCC_002350 [Vibrio cholerae RC9]
gi|229351172|gb|EEO16113.1| hypothetical protein VCE_002614 [Vibrio cholerae B33]
gi|229357345|gb|EEO22262.1| hypothetical protein VCF_000328 [Vibrio cholerae BX 330286]
gi|229370796|gb|ACQ61219.1| hypothetical protein VCD_003059 [Vibrio cholerae MJ-1236]
gi|254844120|gb|EET22534.1| conserved hypothetical protein [Vibrio cholerae MO10]
Length = 637
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|384424425|ref|YP_005633783.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio cholerae LMA3984-4]
gi|327483978|gb|AEA78385.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio cholerae LMA3984-4]
Length = 629
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|421351058|ref|ZP_15801423.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-25]
gi|395951503|gb|EJH62117.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-25]
Length = 629
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|229521404|ref|ZP_04410823.1| hypothetical protein VIF_001936 [Vibrio cholerae TM 11079-80]
gi|229341502|gb|EEO06505.1| hypothetical protein VIF_001936 [Vibrio cholerae TM 11079-80]
Length = 637
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|255745687|ref|ZP_05419635.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio cholera CIRS 101]
gi|262159036|ref|ZP_06030148.1| Signal transduction protein [Vibrio cholerae INDRE 91/1]
gi|262169395|ref|ZP_06037087.1| Signal transduction protein [Vibrio cholerae RC27]
gi|360035190|ref|YP_004936953.1| CBS domain-containing protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741101|ref|YP_005333070.1| hypothetical protein O3Y_06010 [Vibrio cholerae IEC224]
gi|417813311|ref|ZP_12459968.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-49A2]
gi|417816177|ref|ZP_12462809.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HCUF01]
gi|418332324|ref|ZP_12943258.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-06A1]
gi|418337068|ref|ZP_12945966.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-23A1]
gi|418343582|ref|ZP_12950368.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-28A1]
gi|418348735|ref|ZP_12953469.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-43A1]
gi|418354865|ref|ZP_12957586.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-61A1]
gi|419825782|ref|ZP_14349286.1| CBS domain protein [Vibrio cholerae CP1033(6)]
gi|421316038|ref|ZP_15766609.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1032(5)]
gi|421320903|ref|ZP_15771460.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1038(11)]
gi|421324896|ref|ZP_15775422.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1041(14)]
gi|421328557|ref|ZP_15779071.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1042(15)]
gi|421331579|ref|ZP_15782059.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1046(19)]
gi|421335152|ref|ZP_15785619.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1048(21)]
gi|421339046|ref|ZP_15789481.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-20A2]
gi|421347374|ref|ZP_15797756.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-46A1]
gi|422891399|ref|ZP_16933779.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-40A1]
gi|422902611|ref|ZP_16937610.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-48A1]
gi|422906489|ref|ZP_16941321.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-70A1]
gi|422913075|ref|ZP_16947594.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HFU-02]
gi|422925555|ref|ZP_16958580.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-38A1]
gi|423144877|ref|ZP_17132486.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-19A1]
gi|423149555|ref|ZP_17136883.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-21A1]
gi|423153371|ref|ZP_17140565.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-22A1]
gi|423156183|ref|ZP_17143287.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-32A1]
gi|423160009|ref|ZP_17146977.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-33A2]
gi|423164728|ref|ZP_17151486.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-48B2]
gi|423730858|ref|ZP_17704172.1| CBS domain protein [Vibrio cholerae HC-17A1]
gi|423754532|ref|ZP_17712180.1| CBS domain protein [Vibrio cholerae HC-50A2]
gi|423892548|ref|ZP_17726231.1| CBS domain protein [Vibrio cholerae HC-62A1]
gi|423927328|ref|ZP_17730850.1| CBS domain protein [Vibrio cholerae HC-77A1]
gi|424001870|ref|ZP_17744956.1| CBS domain protein [Vibrio cholerae HC-17A2]
gi|424006031|ref|ZP_17749011.1| CBS domain protein [Vibrio cholerae HC-37A1]
gi|424024050|ref|ZP_17763710.1| CBS domain protein [Vibrio cholerae HC-62B1]
gi|424026900|ref|ZP_17766513.1| CBS domain protein [Vibrio cholerae HC-69A1]
gi|424586173|ref|ZP_18025763.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1030(3)]
gi|424590525|ref|ZP_18029962.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1037(10)]
gi|424594872|ref|ZP_18034205.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1040(13)]
gi|424598739|ref|ZP_18037933.1| cyclic nucleotide-binding domain protein [Vibrio Cholerae
CP1044(17)]
gi|424601478|ref|ZP_18040631.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1047(20)]
gi|424606469|ref|ZP_18045429.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1050(23)]
gi|424610298|ref|ZP_18049152.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-39A1]
gi|424613105|ref|ZP_18051908.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-41A1]
gi|424616921|ref|ZP_18055608.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-42A1]
gi|424621870|ref|ZP_18060393.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-47A1]
gi|424644846|ref|ZP_18082594.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-56A2]
gi|424652525|ref|ZP_18090001.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-57A2]
gi|424656426|ref|ZP_18093724.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-81A2]
gi|440709553|ref|ZP_20890210.1| hypothetical protein VC4260B_09550 [Vibrio cholerae 4260B]
gi|443503381|ref|ZP_21070361.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-64A1]
gi|443507285|ref|ZP_21074069.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-65A1]
gi|443511411|ref|ZP_21078066.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-67A1]
gi|443514965|ref|ZP_21081493.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-68A1]
gi|443518765|ref|ZP_21085175.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-71A1]
gi|443523653|ref|ZP_21089881.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-72A2]
gi|443531266|ref|ZP_21097281.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-7A1]
gi|443535039|ref|ZP_21100934.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-80A1]
gi|443538608|ref|ZP_21104463.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-81A1]
gi|449056217|ref|ZP_21734885.1| Cyclic nucleotide-binding domain protein [Vibrio cholerae O1 str.
Inaba G4222]
gi|255736762|gb|EET92159.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio cholera CIRS 101]
gi|262022208|gb|EEY40917.1| Signal transduction protein [Vibrio cholerae RC27]
gi|262029221|gb|EEY47873.1| Signal transduction protein [Vibrio cholerae INDRE 91/1]
gi|340041903|gb|EGR02869.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HCUF01]
gi|340042615|gb|EGR03580.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-49A2]
gi|341623537|gb|EGS49064.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-48A1]
gi|341623624|gb|EGS49148.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-70A1]
gi|341624693|gb|EGS50178.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-40A1]
gi|341639512|gb|EGS64129.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HFU-02]
gi|341647425|gb|EGS71507.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-38A1]
gi|356419135|gb|EHH72693.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-06A1]
gi|356419824|gb|EHH73361.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-21A1]
gi|356425043|gb|EHH78432.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-19A1]
gi|356431587|gb|EHH84791.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-22A1]
gi|356432646|gb|EHH85843.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-23A1]
gi|356436326|gb|EHH89444.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-28A1]
gi|356441857|gb|EHH94733.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-32A1]
gi|356447474|gb|EHI00265.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-43A1]
gi|356449125|gb|EHI01885.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-33A2]
gi|356453267|gb|EHI05930.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-61A1]
gi|356455537|gb|EHI08179.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-48B2]
gi|356646344|gb|AET26399.1| CBS domain-containing protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|378794611|gb|AFC58082.1| hypothetical protein O3Y_06010 [Vibrio cholerae IEC224]
gi|395920566|gb|EJH31388.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1041(14)]
gi|395920995|gb|EJH31815.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1032(5)]
gi|395923885|gb|EJH34696.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1038(11)]
gi|395930063|gb|EJH40812.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1042(15)]
gi|395932843|gb|EJH43586.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1046(19)]
gi|395937013|gb|EJH47736.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1048(21)]
gi|395943994|gb|EJH54668.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-20A2]
gi|395946434|gb|EJH57098.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-46A1]
gi|395960633|gb|EJH70998.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-56A2]
gi|395961714|gb|EJH72027.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-57A2]
gi|395964896|gb|EJH75088.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-42A1]
gi|395972316|gb|EJH81914.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-47A1]
gi|395975908|gb|EJH85378.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1030(3)]
gi|395977712|gb|EJH87115.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1047(20)]
gi|408008433|gb|EKG46415.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-39A1]
gi|408014745|gb|EKG52368.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-41A1]
gi|408034587|gb|EKG71080.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1037(10)]
gi|408034659|gb|EKG71147.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1040(13)]
gi|408043647|gb|EKG79635.1| cyclic nucleotide-binding domain protein [Vibrio Cholerae
CP1044(17)]
gi|408044933|gb|EKG80812.1| cyclic nucleotide-binding domain protein [Vibrio cholerae
CP1050(23)]
gi|408055619|gb|EKG90538.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-81A2]
gi|408609863|gb|EKK83239.1| CBS domain protein [Vibrio cholerae CP1033(6)]
gi|408625614|gb|EKK98520.1| CBS domain protein [Vibrio cholerae HC-17A1]
gi|408638405|gb|EKL10308.1| CBS domain protein [Vibrio cholerae HC-50A2]
gi|408656490|gb|EKL27585.1| CBS domain protein [Vibrio cholerae HC-77A1]
gi|408657721|gb|EKL28798.1| CBS domain protein [Vibrio cholerae HC-62A1]
gi|408847430|gb|EKL87501.1| CBS domain protein [Vibrio cholerae HC-37A1]
gi|408848618|gb|EKL88666.1| CBS domain protein [Vibrio cholerae HC-17A2]
gi|408871632|gb|EKM10866.1| CBS domain protein [Vibrio cholerae HC-62B1]
gi|408879984|gb|EKM18921.1| CBS domain protein [Vibrio cholerae HC-69A1]
gi|439975142|gb|ELP51278.1| hypothetical protein VC4260B_09550 [Vibrio cholerae 4260B]
gi|443432239|gb|ELS74769.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-64A1]
gi|443436318|gb|ELS82441.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-65A1]
gi|443439586|gb|ELS89284.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-67A1]
gi|443443795|gb|ELS97080.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-68A1]
gi|443447814|gb|ELT04456.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-71A1]
gi|443450385|gb|ELT10661.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-72A2]
gi|443458349|gb|ELT25745.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-7A1]
gi|443461901|gb|ELT32957.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-80A1]
gi|443466197|gb|ELT40856.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-81A1]
gi|448264040|gb|EMB01279.1| Cyclic nucleotide-binding domain protein [Vibrio cholerae O1 str.
Inaba G4222]
Length = 629
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|417820704|ref|ZP_12467318.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE39]
gi|421354058|ref|ZP_15804390.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-45]
gi|422305428|ref|ZP_16392632.1| CBS domain protein [Vibrio cholerae CP1035(8)]
gi|423952468|ref|ZP_17734182.1| CBS domain protein [Vibrio cholerae HE-40]
gi|423982120|ref|ZP_17737965.1| CBS domain protein [Vibrio cholerae HE-46]
gi|340038335|gb|EGQ99309.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE39]
gi|395953183|gb|EJH63796.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-45]
gi|408628818|gb|EKL01536.1| CBS domain protein [Vibrio cholerae CP1035(8)]
gi|408660240|gb|EKL31261.1| CBS domain protein [Vibrio cholerae HE-40]
gi|408665120|gb|EKL35939.1| CBS domain protein [Vibrio cholerae HE-46]
Length = 629
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|149375574|ref|ZP_01893344.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
gi|149360279|gb|EDM48733.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
Length = 624
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
P + +A R M R V A+LL D + LSGI+TD+D+ TR + E L P +T +S
Sbjct: 164 PNTVRLQEAARIMTERGVSALLLMDESGKQPRLSGIITDRDLRTRALCEAL-PSETPISD 222
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITK 167
IMT I S++ EA+ M+ HLPV+E + VIA+ DI K
Sbjct: 223 IMTEELITTRSNAFIFEAMLTMLHNNVHHLPVMEGDKVRGVIALSDIVK 271
>gi|294140464|ref|YP_003556442.1| hypothetical protein SVI_1693 [Shewanella violacea DSS12]
gi|293326933|dbj|BAJ01664.1| CBS domain protein [Shewanella violacea DSS12]
Length = 620
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L ++ L I V DA ++M RV +VL+ D N L GI+TD+D+ RV+AEG
Sbjct: 157 VNTLMSTQPLVIDSKASVGDAAKKMRLARVSSVLVMD-NHRLVGILTDRDLRNRVLAEG- 214
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ V + MT PI + S SL EA+ M + HLP+VE G I IL T L
Sbjct: 215 QGVHLPVHQAMTPGPITLISSSLVFEAMLLMSEQSIHHLPIVEEGVPIGILTSTDIL 271
>gi|229529627|ref|ZP_04419017.1| hypothetical protein VCG_002722 [Vibrio cholerae 12129(1)]
gi|229333401|gb|EEN98887.1| hypothetical protein VCG_002722 [Vibrio cholerae 12129(1)]
Length = 637
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|147674424|ref|YP_001216856.1| hypothetical protein VC0395_A0910 [Vibrio cholerae O395]
gi|227117758|ref|YP_002819654.1| hypothetical protein VC395_1410 [Vibrio cholerae O395]
gi|146316307|gb|ABQ20846.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013208|gb|ACP09418.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 637
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|298498617|ref|ZP_07008424.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Vibrio
cholerae MAK 757]
gi|297542950|gb|EFH79000.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Vibrio
cholerae MAK 757]
Length = 589
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 112 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 171
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 172 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 230
Query: 164 DIT 166
D+T
Sbjct: 231 DMT 233
>gi|392553837|ref|ZP_10300974.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas undina
NCIMB 2128]
Length = 612
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + ++ KA+T+P + + ++M + ++++T+ N+ L G+VTD+D
Sbjct: 141 SNNDSWSERKISEIMTRKAITLPPDASIRHSAKKMQEHGISSMMITE-NSHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q + S IMT P F+ ++ AL M++ HLPV+ EN + +
Sbjct: 200 LRNRVLADEVDPAQAINS-IMTNKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPLG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 138 EALQKMVQGKFRHLPVVENGE------------VIAILDITKCLYDAISRMEKAAEQGSA 185
+ + ++ QG + P + G+ ++ +LD T +D + R KA EQ
Sbjct: 70 DTVTRLTQGDYFGYPSLLTGDSIQNSLEVQKEGIVYMLDQTD--FDYLRREYKAFEQYFV 127
Query: 186 IAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKK 245
A A + + SN ++ ER +S I+T K + P + +AKK
Sbjct: 128 RAHANRLLSSHYKSN-------NDSWSER----KISEIMTR--KAITLPPDASIRHSAKK 174
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
M+E +S +I S + G++T +D+ RV+A + P
Sbjct: 175 MQEHGISSMMITENSHLVGVVTDRDLRNRVLADEVDP 211
>gi|146339430|ref|YP_001204478.1| hypothetical protein BRADO2416 [Bradyrhizobium sp. ORS 278]
gi|146192236|emb|CAL76241.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
sp. ORS 278]
Length = 125
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A ++M RV +VL+ D + L+ GIVT D +V+ GL QT V+++MT NP+
Sbjct: 1 MVVEALQKMRDNRVRSVLVMDDDVLV-GIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPV 59
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V D + M Q FRHLPV++ G+V+ ++ I + + I +E +
Sbjct: 60 TVRPDHPLDGCMAMMAQRGFRHLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDD 113
>gi|153830912|ref|ZP_01983579.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|254286610|ref|ZP_04961566.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|148873612|gb|EDL71747.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|150423368|gb|EDN15313.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 637
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|153212300|ref|ZP_01948088.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124116678|gb|EAY35498.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 637
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|229525882|ref|ZP_04415287.1| hypothetical protein VCA_003529 [Vibrio cholerae bv. albensis
VL426]
gi|229339463|gb|EEO04480.1| hypothetical protein VCA_003529 [Vibrio cholerae bv. albensis
VL426]
Length = 637
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|153801306|ref|ZP_01955892.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124123131|gb|EAY41874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 637
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|254226649|ref|ZP_04920228.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125620818|gb|EAZ49173.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 637
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|419829860|ref|ZP_14353346.1| CBS domain protein [Vibrio cholerae HC-1A2]
gi|419832833|ref|ZP_14356295.1| CBS domain protein [Vibrio cholerae HC-61A2]
gi|422917047|ref|ZP_16951375.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-02A1]
gi|423819720|ref|ZP_17715978.1| CBS domain protein [Vibrio cholerae HC-55C2]
gi|423853051|ref|ZP_17719769.1| CBS domain protein [Vibrio cholerae HC-59A1]
gi|423880476|ref|ZP_17723372.1| CBS domain protein [Vibrio cholerae HC-60A1]
gi|423997463|ref|ZP_17740722.1| CBS domain protein [Vibrio cholerae HC-02C1]
gi|424016171|ref|ZP_17756012.1| CBS domain protein [Vibrio cholerae HC-55B2]
gi|424019109|ref|ZP_17758905.1| CBS domain protein [Vibrio cholerae HC-59B1]
gi|424624654|ref|ZP_18063126.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-50A1]
gi|424629153|ref|ZP_18067450.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-51A1]
gi|424633184|ref|ZP_18071294.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-52A1]
gi|424636273|ref|ZP_18074288.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-55A1]
gi|424640212|ref|ZP_18078102.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-56A1]
gi|424648247|ref|ZP_18085917.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-57A1]
gi|443527071|ref|ZP_21093137.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-78A1]
gi|341638440|gb|EGS63087.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-02A1]
gi|408014217|gb|EKG51882.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-50A1]
gi|408019914|gb|EKG57287.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-52A1]
gi|408024994|gb|EKG62066.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-56A1]
gi|408025659|gb|EKG62709.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-55A1]
gi|408034817|gb|EKG71302.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-57A1]
gi|408057443|gb|EKG92293.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-51A1]
gi|408621445|gb|EKK94448.1| CBS domain protein [Vibrio cholerae HC-1A2]
gi|408635653|gb|EKL07839.1| CBS domain protein [Vibrio cholerae HC-55C2]
gi|408642813|gb|EKL14557.1| CBS domain protein [Vibrio cholerae HC-60A1]
gi|408643321|gb|EKL15051.1| CBS domain protein [Vibrio cholerae HC-59A1]
gi|408651477|gb|EKL22733.1| CBS domain protein [Vibrio cholerae HC-61A2]
gi|408853559|gb|EKL93349.1| CBS domain protein [Vibrio cholerae HC-02C1]
gi|408861077|gb|EKM00676.1| CBS domain protein [Vibrio cholerae HC-55B2]
gi|408868823|gb|EKM08137.1| CBS domain protein [Vibrio cholerae HC-59B1]
gi|443454647|gb|ELT18448.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-78A1]
Length = 629
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLP++ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPILRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|260428383|ref|ZP_05782362.1| CBS domain protein [Citreicella sp. SE45]
gi|260422875|gb|EEX16126.1| CBS domain protein [Citreicella sp. SE45]
Length = 173
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ TI A + +R+ A+L+TDA L GI++++DI R+ R V+++MT
Sbjct: 50 PDETI-GHAVEVLRDKRIGAILVTDAAGHLVGILSERDIVRRLADTPGRTLPQTVAELMT 108
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+P T D + L++M G+FRHLPV+E+GE+ ++ I + ++ +E A
Sbjct: 109 TDPQTCTLDETLVRVLRRMTDGRFRHLPVLEDGEIAGMISIGDVVNYRLTALEYEA 164
>gi|149927334|ref|ZP_01915590.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
gi|149824048|gb|EDM83271.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
Length = 619
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+ +L + L + T V +A +MA AV++ D + L GIVTD+D RV+A+G
Sbjct: 151 NIDQLISNSPLCLSGDTPVQEAAVQMAQSNQTAVIVQDESQSLIGIVTDQDFRDRVVAKG 210
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI--------- 162
L P T + IMT +P V + L EA+ M++ +H+PV++N EV+ +
Sbjct: 211 L-PYSTPIRHIMTESPGTVNHNQLVFEAMMLMLRNNTQHVPVLKNSEVVGMVSQSDLVKY 269
Query: 163 -----LDITKCLYDAISRMEKAAEQGSAIAAAVEGVE 194
L + ++++ S +E AA + AA V V+
Sbjct: 270 QSRNSLFLVNSIFNSTSVVELAALKKDVQAAFVRMVQ 306
>gi|127513297|ref|YP_001094494.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
gi|126638592|gb|ABO24235.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
Length = 615
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 48 GGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
G V L + L + VSDA R M RV +VL+ D N L+GI+TD+D+ RV
Sbjct: 147 GSTNRVSSLMSKQPLCLDINASVSDAARLMRDNRVSSVLIID-NQKLAGILTDRDLRNRV 205
Query: 108 IAEGLRPDQTV-VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+AE L D ++ V + MT P +++++L EA+ M Q HLP+++ G I ++ T
Sbjct: 206 LAESL--DGSLPVHQAMTVTPTTLSANALVFEAMLLMSQHNIHHLPIMDEGHPIGVITST 263
Query: 167 KCL 169
L
Sbjct: 264 DIL 266
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
V+ AA+ MR+ R +S LI+ K+ GILT +D+ RV+A++L L
Sbjct: 169 VSDAARLMRDNRVSSVLIIDNQKLAGILTDRDLRNRVLAESLDGSL 214
>gi|417824356|ref|ZP_12470947.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
gi|419836144|ref|ZP_14359587.1| CBS domain protein [Vibrio cholerae HC-46B1]
gi|421342606|ref|ZP_15793011.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-43B1]
gi|423734691|ref|ZP_17707903.1| CBS domain protein [Vibrio cholerae HC-41B1]
gi|424008974|ref|ZP_17751921.1| CBS domain protein [Vibrio cholerae HC-44C1]
gi|340048041|gb|EGR08964.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
gi|395943123|gb|EJH53798.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HC-43B1]
gi|408630992|gb|EKL03564.1| CBS domain protein [Vibrio cholerae HC-41B1]
gi|408858009|gb|EKL97688.1| CBS domain protein [Vibrio cholerae HC-46B1]
gi|408865125|gb|EKM04537.1| CBS domain protein [Vibrio cholerae HC-44C1]
Length = 629
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLP++ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPILRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|254514040|ref|ZP_05126101.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
gi|219676283|gb|EED32648.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
Length = 621
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT+ V A R MA RRV + + + LL GI+TD+D+ TRV+A GL +QT+V
Sbjct: 166 LTVSPELTVQQAARAMAERRVSSTFVLEGEELL-GILTDRDLRTRVLAAGLN-NQTLVRD 223
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+MT NP +++ M Q F HLPV+E+G + ++
Sbjct: 224 VMTPNPESISAQESLFATTLLMTQRSFHHLPVLEDGRLAGVV 265
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 215 MFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMR 274
M P +S+++T + + VSP V AA+ M E R +S ++ G ++ GILT +D+ R
Sbjct: 153 MLAP-VSSVMTRD--ILTVSPELTVQQAARAMAERRVSSTFVLEGEELLGILTDRDLRTR 209
Query: 275 VVAQNLSPELTLV 287
V+A L+ + TLV
Sbjct: 210 VLAAGLNNQ-TLV 221
>gi|153826599|ref|ZP_01979266.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739611|gb|EDM53831.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 637
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A TI + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 160 VKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDL 219
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLP++ + I I+
Sbjct: 220 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPILRERQPIGII 278
Query: 164 DIT 166
D+T
Sbjct: 279 DMT 281
>gi|260427030|ref|ZP_05781009.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Citreicella sp. SE45]
gi|260421522|gb|EEX14773.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Citreicella sp. SE45]
Length = 607
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L + LTI G V +A MA RRV +V + + AL GI+T +D++ +V+A GL
Sbjct: 144 VETLMAADPLTIGPGATVQEAASLMAERRVSSVCIIEGEAL-KGILTIRDVSAKVVARGL 202
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T V+++MT P+ + + + L M++ H+PV E G ++ I+ D+T+
Sbjct: 203 -PFDTPVTQVMTEAPLTLAPSDIGSDVLHMMMERNIGHVPVTEGGRLVGIVTQTDLTR-- 259
Query: 170 YDAISRMEKAAE 181
+ A+S AE
Sbjct: 260 FQAVSSAGLVAE 271
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 205 YAFIETLRE-----RMF------KPSLSTIITENAKVAIVSPSDPVAV--------AAKK 245
YAF E +RE R F KP S + +++V + +DP+ + AA
Sbjct: 110 YAFNELIREHPAAQRFFDRSRAAKPRKSDL--AHSRVETLMAADPLTIGPGATVQEAASL 167
Query: 246 MREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNL 280
M E R +S I+ G ++GILT +DV +VVA+ L
Sbjct: 168 MAERRVSSVCIIEGEALKGILTIRDVSAKVVARGL 202
>gi|343501210|ref|ZP_08739090.1| cyclic nucleotide-binding protein [Vibrio tubiashii ATCC 19109]
gi|418480414|ref|ZP_13049473.1| cyclic nucleotide-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342818722|gb|EGU53577.1| cyclic nucleotide-binding protein [Vibrio tubiashii ATCC 19109]
gi|384571956|gb|EIF02483.1| cyclic nucleotide-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 629
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA---------NALLSGIVTDKDI 103
V+ L S+A TIP + +A +MA V ++L+ D N L GI+TD+D+
Sbjct: 152 VRTLLTSEAPTIPMSETIQNAAIKMAEENVSSLLIVDPDIAQDDEDDNNPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A+GL P VS +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAQGLDPSDE-VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|406922552|gb|EKD60005.1| cbs [uncultured bacterium]
Length = 139
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
++ G V AC + V AVL+ AL+ G+V+++D+ + I + D T+V +I
Sbjct: 17 SVQSGATVRQACHVLDHFNVGAVLVLKGEALV-GLVSERDVIRKCIGQDRHSDSTLVDEI 75
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
MT +P V + +AL M QG FRH+PV+E G I +L I
Sbjct: 76 MTVDPKTVQASDGLNDALAHMTQGHFRHMPVLEAGRCIGLLSI 118
>gi|114766854|ref|ZP_01445781.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pelagibaca bermudensis HTCC2601]
gi|114540975|gb|EAU44034.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseovarius sp. HTCC2601]
Length = 607
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L K LT+P V A + MA R V +V +T+ LL GI+T +D++ +V+ GL
Sbjct: 144 VETLMAPKPLTLPPSATVQQAAKAMAERHVSSVCVTEGERLL-GILTIRDVSGKVVGAGL 202
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T ++++MT +P+ + ++ + L M++ H+PV E G ++ ++ D+T+
Sbjct: 203 -PFDTPLAQVMTADPMTLPPSAIGSDVLHMMMERNVGHVPVSEGGRLVGMVTQTDLTR-- 259
Query: 170 YDAISRMEKAAE 181
+ A+S E AE
Sbjct: 260 FQAVSSAELVAE 271
>gi|406924104|gb|EKD60999.1| CBS protein [uncultured bacterium]
Length = 144
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P GT V+ +++RR+ AV+++ L GIV+++DI V G V
Sbjct: 16 VTLPPGTAVARVAEVLSARRIGAVVISPDGKQLGGIVSERDIVREVGRRGSTCLTDTVES 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
IMT + T + LQKM G+FRH+PV+E GE+I ++ D+ K +S MEK
Sbjct: 76 IMTAKVVTCTRADNTNDILQKMTDGRFRHVPVLEGGELIGLISIGDVVKARLSELS-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|148254227|ref|YP_001238812.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
gi|146406400|gb|ABQ34906.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
Length = 125
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A ++M RV +VL+ D + +L GIVT D +V+ GL QT V ++MT NP+
Sbjct: 1 MVVEALQKMRDNRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKQTQVGQVMTANPV 59
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
V D + M Q FRHLPV++ G+V+ ++ I + + I +E +
Sbjct: 60 TVKPDHPLDGCMAMMSQRGFRHLPVLDAGKVVGVISIGDVVKNIIRDLEHNVD 112
>gi|375103591|ref|ZP_09749852.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
gi|374664322|gb|EHR69107.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
Length = 146
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T+ AC M +VL+ +A + + GI+T++D+ TRV+A+ L P T VS +MT
Sbjct: 20 PDATVHEAACV-MTRANCGSVLIINAASAMVGILTERDLMTRVLAKALDPATTKVSAVMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQG 183
+P+ + D+ +A+ M++ FRHLPVV + G + + + DA+ R E G
Sbjct: 79 PHPMCIPPDTKVADAVLIMIERGFRHLPVVGDGGHIHGVFSV----RDALPR-----EIG 129
Query: 184 SAIAAA 189
+A++ A
Sbjct: 130 TAVSLA 135
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTD----ANALLSGIVTDKDITTRVIAEGLRPDQT 117
+ +P V DA MA RRV A+L+T L GI T++D+ RV+A G P T
Sbjct: 17 VCLPPEASVRDAAVLMAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRDPATT 76
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDITKCLYDAI 173
++++MT +P + D+ A EAL M + +RHLP+ +GE V+ I+ I
Sbjct: 77 RLAEVMTASPDTLGPDAHAYEALDLMERHHYRHLPITADGESDGTVMGIVSIRDLFAVVR 136
Query: 174 SRMEKAAEQGSAIAAAVEGVERQWGSNFSA 203
+ +E A +GSN+SA
Sbjct: 137 AHLEDEIRDREAFI---------FGSNYSA 157
>gi|149914738|ref|ZP_01903268.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
gi|149811531|gb|EDM71366.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
Length = 144
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ GT+VS+A + +A RR+ ++++ GI++++DI + +G V
Sbjct: 16 ITVTPGTLVSEAAQILAERRIGGLVVSKKGDTADGILSERDIVRALAVKGAVCLSETVDG 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
+MTRNP+ + L +M +G+FRH+PVV +G+++ I+ D+ K +S MEK
Sbjct: 76 MMTRNPVCCVLQDSSDSVLARMTEGRFRHMPVVTDGKLVGIVTIGDVVKARLQELS-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 15/142 (10%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T++ DA ++MA + + AVL+ + L +GI +++D + I +G +QT++ ++MT
Sbjct: 20 PETTVL-DALKQMADKNIGAVLVLEEGKL-AGIFSERDYARKGILQGRASNQTLIKEVMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGS 184
I VTS+ EA+ M + RHLPVV+ GE+I I+ I + I +
Sbjct: 78 AKLITVTSEQKLEEAMVIMSEKHIRHLPVVDEGELIGIISINDVVASIIKDQK------- 130
Query: 185 AIAAAVEGVERQWGSNFSAPYA 206
A +E +E N PYA
Sbjct: 131 ---ARIESLESYISGN---PYA 146
>gi|374704423|ref|ZP_09711293.1| CBS domain-containing protein [Pseudomonas sp. S9]
Length = 669
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 27/169 (15%)
Query: 25 ENGGNLSKPPSPQGES--SSSVGGAGGERTVKKLRLSKALTIPEGTI-----VSDACRRM 77
EN + + +G+S ++V G + K+++ K + P T+ V +A + M
Sbjct: 142 ENNDSFADFVEAEGQSRLKAAVSSQGKTNDLMKIKVRKLIDRPAVTVDISATVREAAQVM 201
Query: 78 ASRRVDAVLLTD----------------ANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ V +VL+ D A ++ GI+TD+D TRV+A+GL D T +++
Sbjct: 202 DAHNVSSVLIVDPSVEWPNSRLTSVANQAMHVMVGIITDRDFRTRVVAQGLSAD-TPITE 260
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITK 167
+MT NPI + SD EA+ M++ HLP+V V+ + DI K
Sbjct: 261 VMTNNPITLQSDDSVFEAILCMLRNNIHHLPLVHRRRPVGVVTLADIIK 309
>gi|301058158|ref|ZP_07199210.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447790|gb|EFK11503.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 655
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 52 TVKKLRLSKA--LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
T K +SK T P V R M+ +R+ +VLLTD + GIVTDKDI +V+A
Sbjct: 180 TAKAGEISKGRLFTAPASATVQQISRIMSEKRIGSVLLTDDREEVIGIVTDKDIRGKVVA 239
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+GL QT S+IMT ++ S+ +AL M++ + HL + ENG++ +L
Sbjct: 240 QGLDY-QTKASEIMTAPVQTISGQSVCFDALLAMIKRRIHHLAIEENGKISKML 292
>gi|71907424|ref|YP_285011.1| CBS [Dechloromonas aromatica RCB]
gi|71847045|gb|AAZ46541.1| CBS protein [Dechloromonas aromatica RCB]
Length = 144
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT V +A M A+L+ D LL+GI T++DI R +A G P T ++ IMTRN
Sbjct: 21 GTTVREAAIIMKEWHSSAILIID-KGLLAGICTERDIVFRAVANGCDPANTAITTIMTRN 79
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
V+ D AL M +G FRH+PVV++ G + +L
Sbjct: 80 IQTVSPDKPFGHALHLMYEGGFRHIPVVDDAGHPVGLL 117
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 51 RTVKKLRLSKALTI----PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
+TVK + +KA +I P +++ A R M + + A+L+ D LL GI T++D +
Sbjct: 2 KTVKYILENKAKSIVSVSPNDSVLG-ALRIMMEKNISALLVVDQGVLL-GIFTERDYARK 59
Query: 107 VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+I +G T + ++MT NP V + +Q M FRHLP+VENG +I I+ I
Sbjct: 60 IILKGRASANTAIHEVMTSNPHTVGPNHSIDHCMQLMTDRHFRHLPIVENGNLIGIISI 118
>gi|168700189|ref|ZP_02732466.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
Length = 171
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 19 KRTSSSENGGNLSKP------PSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSD 72
K ++ GN P P+P G +S+ V L +T+ G + D
Sbjct: 10 KNALGADACGNCGLPLTRLNAPAPNGPVEASLM----REPVSVLDPRPPITVDAGATLGD 65
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI-AEGL--RPDQTVVSKIMTRNPIF 129
A RRM R AVL+T L GI+T++D T+V A G RP V + MT P
Sbjct: 66 AVRRMIDGRTGAVLVTGPGGELVGILTERDFLTKVAGAPGFEARP----VREFMTLAPET 121
Query: 130 VT-SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
VT +D+LA AL KM G +RHLPVVE G + ++ +
Sbjct: 122 VTPTDTLAF-ALGKMDAGAYRHLPVVEGGRPVGVISV 157
>gi|220702516|pdb|3FHM|A Chain A, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702517|pdb|3FHM|B Chain B, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702518|pdb|3FHM|C Chain C, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702519|pdb|3FHM|D Chain D, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
Length = 165
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ AV++TDA+ ++ GI T++D+ V +G Q VS MT+N +
Sbjct: 46 IGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVR 105
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+S + ++ M G+FRH+PV ENG + I+ I + I +E AE
Sbjct: 106 CQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEH 158
>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 149
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P T V++A R +A RR+ V++++ GI++++DI + A+G V
Sbjct: 21 VTVPPATTVAEAVRMLAERRIGGVVISEDGQTPLGILSERDIVRVLSAQGADVLTATVDA 80
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKA 179
+MT N T D + L +M +G+FRH+PVVE G ++ ++ I + I+ MEK
Sbjct: 81 LMTTNLQTCTRDEDSNVVLARMTEGRFRHMPVVEEGVMVGMISIGDLVAAQIAELSMEKE 140
Query: 180 AEQG 183
A QG
Sbjct: 141 ALQG 144
>gi|77359543|ref|YP_339118.1| inosine-5`-monophosphate dehydrogenase [Pseudoalteromonas
haloplanktis TAC125]
gi|76874454|emb|CAI85675.1| conserved protein of unknown function ; putative
inosine-5'-monophosphate dehydrogenase (IMP
dehydrogenase) [Pseudoalteromonas haloplanktis TAC125]
Length = 612
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 47 AGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
+ ER + +L KA+T+ + + A ++M V ++++T +A L G+VTD+D+ R
Sbjct: 145 SWSERKISELMTRKAITLTPDSSIRHAAKQMQEYGVSSIMIT-QDAHLVGVVTDRDLRNR 203
Query: 107 VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDI 165
V+A+ + P Q+ VS IMT P F+ ++ AL M++ H+PV+ EN + + ++
Sbjct: 204 VLADEVDPQQS-VSSIMTAKPKFIFENNRVFSALHLMLKHNIHHIPVLDENHKPLGMITS 262
Query: 166 TKCL 169
T L
Sbjct: 263 TDLL 266
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 142 KMVQGKFRHLPVVENGEVIA----------ILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ QG + P + GE + + + + +D + R K EQ A A
Sbjct: 74 RLAQGDYFGFPSLLTGEAMQNRLEVQKEGIVYMLPQEPFDYLRREYKPLEQYFVRAHANR 133
Query: 192 GVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRS 251
+ + S E+ ER +S ++T K ++P + AAK+M+E+
Sbjct: 134 LLSSHYKSK-------TESWSER----KISELMTR--KAITLTPDSSIRHAAKQMQEYGV 180
Query: 252 NSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
+S +I + + G++T +D+ RV+A + P+
Sbjct: 181 SSIMITQDAHLVGVVTDRDLRNRVLADEVDPQ 212
>gi|227832961|ref|YP_002834668.1| signal-transduction protein [Corynebacterium aurimucosum ATCC
700975]
gi|262182552|ref|ZP_06041973.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
gi|227453977|gb|ACP32730.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
Length = 622
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA----NALLSGIVTDKDITTRVI 108
+++L + LT P T + +A M V ++L+ ++ + L+GI+TD+D+ TRV+
Sbjct: 153 LRELIRTDVLTAPAATTIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRDLRTRVL 212
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DI 165
A P V +IMT P+ V++D+ A+EAL M + HLPVV+ G + I+ D+
Sbjct: 213 AAQRDP-AAPVGEIMTPQPLTVSADAPAMEALLHMAERGIHHLPVVKEGALQGIVTQSDV 271
Query: 166 TKCLYD 171
T+ L++
Sbjct: 272 TRLLHN 277
>gi|384920912|ref|ZP_10020909.1| CBS domain-containing protein [Citreicella sp. 357]
gi|384465251|gb|EIE49799.1| CBS domain-containing protein [Citreicella sp. 357]
Length = 172
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSKIM 123
GT+V R + + AV++ DA + L GI++++DI R+ P QT+ V+++M
Sbjct: 54 GTVV----RLLRDNDIGAVMVLDAQSSLVGILSERDIVRRLADT---PGQTLPQTVAELM 106
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
TRN T D L + L++M G+FRH+PV+ENG VI ++ + + ++ +E A Q
Sbjct: 107 TRNVETCTLDDLLVSVLRRMTDGRFRHMPVMENGAVIGLISVRDVVRYRLTALEYEALQ 165
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S ++P V DA M R+ ++++ + N+ GI T++D+ RV+ EG+ P +T
Sbjct: 14 SVVFSVPSNVTVCDAVNEMNRHRIGSIVVLE-NSSPIGIFTERDVLRRVVGEGVDPKRTP 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
V+++MT PI +T ++ + + + RHLPV+ NG+++ ++ DI++ + D
Sbjct: 73 VNQVMTARPITITPETTIEQTMTLFAEKNCRHLPVLVNGKLVGLISIGDISRWMAD 128
>gi|163751908|ref|ZP_02159121.1| CBS domain protein [Shewanella benthica KT99]
gi|161328191|gb|EDP99356.1| CBS domain protein [Shewanella benthica KT99]
Length = 515
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
L I + V +A ++M RV +VL+ D N L GI+TD+D+ RV+AEGL V +
Sbjct: 104 LVIDSSSTVGEAAQQMRLVRVSSVLVID-NHQLVGILTDRDLRNRVLAEGL-DGHLPVHQ 161
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT P +TS SL EA+ M + HLP+V+ G+ I I+ T L
Sbjct: 162 AMTTRPKTLTSSSLVFEAMLLMSEHSINHLPIVDEGKPIGIITSTDIL 209
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 220 LSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQN 279
+ST+++++ V + S V AA++MR R +S L++ ++ GILT +D+ RV+A+
Sbjct: 95 VSTLMSKHPLV--IDSSSTVGEAAQQMRLVRVSSVLVIDNHQLVGILTDRDLRNRVLAEG 152
Query: 280 LSPEL 284
L L
Sbjct: 153 LDGHL 157
>gi|374335199|ref|YP_005091886.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
gi|372984886|gb|AEY01136.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
Length = 623
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 70 VSDACRRMASRRVDAVLL----TDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
V DA R+M V ++L+ +DA ++GI+TD+D+ TRV+AE L P T VS++M+
Sbjct: 169 VFDAARKMTDEGVSSILVLKEGSDAEQEVAGIITDRDLRTRVLAEQL-PSATPVSEVMST 227
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ + SD EA+ M++ HLPV+ G I ++ ++ L
Sbjct: 228 DLVAAESDQYVFEAMLTMLRCNLHHLPVLHRGRPIGVVALSDVL 271
>gi|163848274|ref|YP_001636318.1| hypothetical protein Caur_2724 [Chloroflexus aurantiacus J-10-fl]
gi|222526188|ref|YP_002570659.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
gi|163669563|gb|ABY35929.1| protein of unknown function DUF294 nucleotidyltransferase putative
[Chloroflexus aurantiacus J-10-fl]
gi|222450067|gb|ACM54333.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
Length = 613
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V DA R M R+ ++++ GI+TD+D+ RV+AEGL PD T V ++M+
Sbjct: 164 PEAT-VGDAARLMRDERISSLIVEHTPI---GIITDRDLRNRVLAEGL-PDTTPVRQVMS 218
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+LA E L M++ HLP+VE V+ ++ T L
Sbjct: 219 APATTIAADALAFEGLLLMLERGIHHLPLVEGDRVVGVVTHTDIL 263
>gi|399523073|ref|ZP_10763733.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109101|emb|CCH40294.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 639
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 20/134 (14%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD----------------ANALLSG 96
V+KL A+++P T + + M V +V++ D + +++G
Sbjct: 153 VRKLISRSAISVPLDTPIQQVAQVMTEHSVSSVIVVDPGTRWPDPNQVDVAEQQSQVMAG 212
Query: 97 IVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
I+TD+D+ TRV+A GL P T VS+IMT NPI + +D EA+ M++ HLPV+
Sbjct: 213 ILTDRDLRTRVVAAGL-PSDTPVSQIMTPNPITLQADDSVFEAMLCMLRNNIHHLPVLHR 271
Query: 157 GE---VIAILDITK 167
V+A+ DI +
Sbjct: 272 RRPVGVVALADIIR 285
>gi|409038017|gb|EKM48265.1| hypothetical protein PHACADRAFT_132508 [Phanerochaete carnosa
HHB-10118-sp]
Length = 426
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLL----------TDANALLSGIVTDKDITTRVIAEGL 112
T+ T V + + M RR AV + T A ++GI T KD+ RVIA GL
Sbjct: 9 TVGPKTTVREVAKLMKERRTTAVCVMESPSTSMGGTAATPRIAGIFTSKDVVLRVIAAGL 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYD 171
+ V ++MT +P +AL+KM G + +LPV+E +G +IAI+D+ K Y
Sbjct: 69 DAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVIETDGRLIAIVDVLKLTYA 128
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNF 201
+ +M + + + A G WG F
Sbjct: 129 TLEQMNAMSAEAAGGAEPEGG--PMWGRFF 156
>gi|433446763|ref|ZP_20410655.1| signal-transduction protein containing cAMP-binding and CBS domains
[Anoxybacillus flavithermus TNO-09.006]
gi|432000270|gb|ELK21170.1| signal-transduction protein containing cAMP-binding and CBS domains
[Anoxybacillus flavithermus TNO-09.006]
Length = 611
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L + +T+P V +A ++MA+ + ++++TD L GI+T+ D+ RV+ + L
Sbjct: 158 VQDLMVRDVVTLPPTATVQEAAKKMAATHISSIVVTDEQTL-CGILTETDLVERVLGQSL 216
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
P TVV ++MT++ ++ + +AL M++ +HLPVV++G+V I+ + +
Sbjct: 217 -PYDTVVEQVMTKDVATISRFAYYYDALAMMIERGVKHLPVVDDGKVEGIVTFSDLM 272
>gi|350531020|ref|ZP_08909961.1| hypothetical protein VrotD_07857 [Vibrio rotiferianus DAT722]
Length = 629
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTRDAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRP-DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
TRV+AEGL P D+ VS +MT I + ++ EA+ M++ HLPVV++ I I
Sbjct: 212 CTRVLAEGLSPLDE--VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKDQMPIGI 269
Query: 163 LDIT 166
++ T
Sbjct: 270 IEAT 273
>gi|269961701|ref|ZP_06176062.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|424046686|ref|ZP_17784248.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
gi|269833566|gb|EEZ87664.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408884746|gb|EKM23474.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
Length = 629
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI G + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTRDAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEDDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRP-DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
TRV+AEGL P D+ VS +MT I + ++ EA+ M++ HLPVV++ I I
Sbjct: 212 CTRVLAEGLSPLDE--VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKDQMPIGI 269
Query: 163 LDIT 166
++ T
Sbjct: 270 IEAT 273
>gi|304393083|ref|ZP_07375012.1| signal-transduction protein [Ahrensia sp. R2A130]
gi|303294848|gb|EFL89219.1| signal-transduction protein [Ahrensia sp. R2A130]
Length = 145
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+TI + ++DA +A RR+ A+L D N ++GI++++DI + +G + +S
Sbjct: 15 VTISQSETLADAATILADRRIGAILAVDENGKMTGILSERDIIKFLAKDGAAALEKQISA 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMV-QGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
MTRN + I+A++ M+ +G+FRH+PV+E+GE+ I+ ++ + ++++ + A
Sbjct: 75 CMTRNVVTCQRRD-TIDAVRTMMGEGRFRHVPVMEDGELAGIISVSDVVKHRMAQVSREA 133
Query: 181 EQ 182
E+
Sbjct: 134 EE 135
>gi|153835335|ref|ZP_01988002.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
gi|156974174|ref|YP_001445081.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
gi|148868149|gb|EDL67306.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
gi|156525768|gb|ABU70854.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
Length = 629
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L +A TI G + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTREAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRP-DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
TRV+AEGL P D+ VS +MT I + ++ EA+ M++ HLPVV+ I I
Sbjct: 212 CTRVLAEGLSPLDE--VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKEQMPIGI 269
Query: 163 LDIT 166
++ T
Sbjct: 270 IEAT 273
>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 173
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 52 TVKKLRLSKALTI----PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
TV+KL K ++ P+ T+ S A + +A + + A+L+TDA+ L GI++++DI ++
Sbjct: 33 TVRKLIDHKGRSVFSITPDDTL-STAVKVLADKHIGALLVTDADGALVGILSERDIVRKL 91
Query: 108 IAEGLRPDQTV---VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
A P QT+ V++ MT+N + D ++ L+ M G+FRH+PV+E+G++ +L
Sbjct: 92 AAT---PGQTLPQTVAENMTKNVQTCSLDDQLVDVLKTMTDGRFRHIPVLEDGKLCGMLT 148
Query: 165 ITKCLYDAISRMEKAAEQ 182
I + + +E A Q
Sbjct: 149 IGDVVNYRLLELEYEAMQ 166
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 52 TVKKLRLSKALTI----PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
TV++L L K + PE T++ +A + +A V A+L+ + + LL GI +++D ++
Sbjct: 2 TVRQLLLRKGGAVYRIRPEATVL-EALKELARHDVGALLVMEGDRLL-GIFSERDYARKL 59
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
+ G T+V ++MT NPI VT ++ EA++ M + + RHLPV+E G V+ ++ I
Sbjct: 60 VLLGRFSKDTLVREVMTENPITVTPETDLEEAMRLMTEHRVRHLPVLEGGRVVGVVSIGD 119
Query: 168 CLYDAISRMEKAAEQGSAI 186
+ I+ EQG I
Sbjct: 120 AVKAIIT------EQGVLI 132
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R + + + + A + G V DA MA + AVL+T+ N L+GI T++D +++ +
Sbjct: 7 RQILETKGAGAHAVSPGVSVFDALAVMAKHDIGAVLVTE-NDHLTGIFTERDYARKLVLK 65
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
GL + V ++MT N +T E + M + +FRHLPVVE G++ I+ I +
Sbjct: 66 GLSSKEATVGELMTPNVCTITPSHTVDEVMNIMTENRFRHLPVVERGKIAGIVTIGDVVK 125
Query: 171 DAISRMEKAAEQGSAIAAA 189
I + E+ S+ A
Sbjct: 126 SIIVQQEETISHLSSYIAG 144
>gi|269960763|ref|ZP_06175134.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834427|gb|EEZ88515.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 620
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + G++TD+D+T RVIA+G+ D+ + S++MT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVSTDRPI-SEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 151 LPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
LP+VEN +V+ +L T + + AI +EK GS + + ERQ
Sbjct: 254 LPLVENNKVVGVLTTTHLVQNHRVQAIFLIEKIKYAGSVKSLSSFTPERQ 303
>gi|427429553|ref|ZP_18919583.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
gi|425880282|gb|EKV28981.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
Length = 610
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 38 GESSSSVGGAGGERTVK--KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS 95
G SS+ VG T+K L +SK L+ T DA R M R+ ++ + + L+
Sbjct: 130 GGSSARVGRQTDLATLKVTDLMVSKLLSAAPQTSAQDAARLMRENRISSLPVVEGEKLV- 188
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GIVT +D++ RV+AEG R T ++ IMT +P+ ++ SL + L M++ + HLPVV
Sbjct: 189 GIVTTRDLSGRVLAEG-RSADTPLADIMTPDPLTLSPQSLGSDILNMMLENRVGHLPVVR 247
Query: 156 NGEVIAIL---DITKCLYDAISRMEKAAEQGSAIAAAVEGVER 195
+G+++ ++ D+T+ + + + + A + E ER
Sbjct: 248 DGKLLGMITQTDVTRYQATSSAHLVRDAAMAGSFTDLAEVTER 290
>gi|336177199|ref|YP_004582574.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
gi|334858179|gb|AEH08653.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
Length = 144
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T +++ A I E + DA RRM V A+ + + L GI+TD+DI R +AEG
Sbjct: 3 TAQEIMHRDAECIGESETLVDAARRMRDLGVGALPICGDDNRLQGIITDRDIVIRCLAEG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
P T ++ P ++ +D+ E LQ+M++ + + LPV++N +++ ++
Sbjct: 63 RDPATTRARELGQGRPFYIDADANVDEVLQQMMEHRIKRLPVIDNNQLVGMI 114
>gi|15889056|ref|NP_354737.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15156853|gb|AAK87522.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 144
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ AV++TDA+ ++ GI T++D+ V +G Q VS MT+N +
Sbjct: 25 IGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVR 84
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+S + ++ M G+FRH+PV ENG + I+ I + I +E AE
Sbjct: 85 CQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEH 137
>gi|392374018|ref|YP_003205851.1| hypothetical protein DAMO_0951 [Candidatus Methylomirabilis
oxyfera]
gi|258591711|emb|CBE68012.1| conserved protein of unknown function [Candidatus Methylomirabilis
oxyfera]
Length = 153
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 71 SDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFV 130
++ R+M ++V VL+ + LL G++TD+++T + +AEG P T + +IM RNP +
Sbjct: 21 AEVARKMRDQKVGCVLIANEGKLL-GLITDRELTIQCVAEGWNPQTTRIEEIMIRNPYTI 79
Query: 131 TSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDIT---KCLYDAI 173
D EA + Q K R PVVE+G+ ++++ D+ K +D I
Sbjct: 80 APDFEMAEAARLFGQRKVRRFPVVEDGQKLLGILSVADVAPDFKAYFDGI 129
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 234 SPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
SP + A A+KMR+ + LI K+ G++T +++ ++ VA+ +P+ T +E ++R
Sbjct: 15 SPWETAAEVARKMRDQKVGCVLIANEGKLLGLITDRELTIQCVAEGWNPQTTRIEEIMIR 74
>gi|442608733|ref|ZP_21023480.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441750129|emb|CCQ09542.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 612
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 50 ERTVKKLRLSKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
ER + +L A+T+ PE +I DA + M+ RV ++++T ++ L+ G++TD+D+ RV+
Sbjct: 148 ERRIAELMTRTAVTLEPEASI-RDAAKAMSEARVSSIMITQSDKLI-GVITDRDLRNRVL 205
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
A + P+++V+S +MT P ++ ++ AL M++ HLPV++
Sbjct: 206 AAEVSPEESVLS-VMTHKPKYIFENNRVFSALHLMLKHNIHHLPVLD 251
>gi|418299566|ref|ZP_12911399.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535031|gb|EHH04327.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 144
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ +V++TDA+ ++ GI T++D+ V +G Q VS MT+N I
Sbjct: 25 IGEAAATLNAHKIGSVVVTDADGVVLGIFTERDLVKIVAGQGAASLQQSVSVAMTKNVIR 84
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+S E ++ M G+FRH+PV ENG + I+ I + I +E AE
Sbjct: 85 CHHNSTTDELMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEH 137
>gi|389689370|ref|ZP_10178708.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388590281|gb|EIM30566.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 143
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+S+A R +A RR+ A+L+ D + + GI++++DI V A+G + VS+ MT +
Sbjct: 23 LSEAARVLAERRIGALLIVDGHRPVVGIISERDIVRAVAAQGAKALDEPVSRFMTEKVVT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRMEKAAEQGSAI 186
T ++ + ++ M Q KFRH+PVVE G +I+I D+ K R+E+ + AI
Sbjct: 83 CTGETSINDIMELMTQQKFRHIPVVEGGRLSGIISIGDVVKL------RLEEVEAETQAI 136
>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
Length = 146
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 51 RTVKKLRLSKALTIPEGTI-VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
R ++ L + L T+ V ACR M +++ A+L+ + N ++GI T++D ++++
Sbjct: 4 RMIRNLLDGRTLVTASKTMSVRSACRLMTDKKIGALLVVE-NGRIAGIFTERDALNKILS 62
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
L PD T + ++M R+P + +D AL M +G FRH+PVV+
Sbjct: 63 AALDPDATTLDQVMVRDPQTIGADKPLSYALYMMAEGGFRHVPVVD 108
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
+++ ++ T V DA MA + + AVL+ D L SGI +++D +++ +G D
Sbjct: 11 KINALFSVTSSTTVYDALVEMADKNIGAVLVIDEGKL-SGIFSERDYARKIVLKGRHSDD 69
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T VS +MT N I V + A+Q M + RHLPV+EN ++ I+ I D +S +
Sbjct: 70 TPVSDVMTANVITVEMEDKLEMAMQIMSEKHIRHLPVMENAILVGIISIN----DVVSSI 125
Query: 177 EKAAEQGSAIAA 188
EQ S IA+
Sbjct: 126 --IQEQKSQIAS 135
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE ++ DA + MA R+ A+L+ L+ G+++++D +VI +G QT VS IM+
Sbjct: 20 PEAPVL-DAIKHMAEHRIGALLVMRGEQLV-GVMSERDYARKVILQGRSSSQTAVSDIMS 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDA 172
P+ V+ D+ + ++ + RHLPVV +G+V+ ++ D+ K + DA
Sbjct: 78 GPPLTVSPDTDVFDCMRLCTDSRIRHLPVVHDGKVVGVISIGDLVKAVIDA 128
>gi|424030292|ref|ZP_17769776.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408881916|gb|EKM20771.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
Length = 623
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTVK + ++ T + D RM SR + + + + L G++TD+D+T +V+A+
Sbjct: 156 RTVKDIASENITSVDYLTPIQDVAERMCSRPKSSCAVVEKSGELVGVITDRDMTMKVVAK 215
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
GL P T V +IMT + D IEA+ M++ R LPV+ G+V +L T ++
Sbjct: 216 GL-PLTTPVHQIMTSPVTVIDEDERIIEAISLMLEHNIRSLPVISKGQVCGLLTTTHLVH 274
Query: 171 D 171
+
Sbjct: 275 N 275
>gi|407071280|ref|ZP_11102118.1| hypothetical protein VcycZ_17128 [Vibrio cyclitrophicus ZF14]
Length = 620
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ + TI S A + R AV+ D + + G++TD+D+T RVIA G+ D +++S
Sbjct: 167 AIVKSQQTIQSVAVEMLHQRSPCAVIYEDES--IVGLITDRDMTKRVIAHGVSTD-SLIS 223
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT +P+ V D L + A M+Q R+LPVV+ +VI +L + + + AI +
Sbjct: 224 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVVKENKVIGLLTTSHLVQNHRVQAIFLI 283
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK GS + ERQ
Sbjct: 284 EKIKYAGSVKTMSSFTSERQ 303
>gi|336323556|ref|YP_004603523.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Flexistipes sinusarabici DSM
4947]
gi|336107137|gb|AEI14955.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Flexistipes sinusarabici DSM
4947]
Length = 639
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 39 ESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIV 98
+ + + ++ ++ + S +T+ S+ M + + ++L+ D+N + GIV
Sbjct: 148 DHQTQIDAYPFQKKIRDIMTSNPVTVSRKATASEIANVMTEKGISSILICDSNNKVEGIV 207
Query: 99 TDKDITTRVIA---EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
T++D+ T++++ E + D S+ MT +P ++SD EA M++ K RHLP+V+
Sbjct: 208 TERDLVTKILSRNDEFCQKDMKA-SEFMTPDPYVMSSDDYMYEAAAFMLRHKIRHLPIVD 266
Query: 156 NGEVIAILDI 165
N E+ IL I
Sbjct: 267 NEELTGILSI 276
>gi|422910082|ref|ZP_16944724.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-09]
gi|341633834|gb|EGS58615.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-09]
Length = 629
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A I + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRPAPAIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|170727179|ref|YP_001761205.1| hypothetical protein Swoo_2835 [Shewanella woodyi ATCC 51908]
gi|169812526|gb|ACA87110.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella woodyi ATCC 51908]
Length = 615
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L + L I VSDA ++M RV +VL+ D N L GI+TD+D+ RV+AEG
Sbjct: 152 VSSLMSNNPLIIDINASVSDAAKKMREARVSSVLVID-NHKLCGILTDRDLRNRVLAEG- 209
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ V + MT P ++S++L EA+ M + HLP+V++ + +L T L
Sbjct: 210 QDGSLPVHQAMTTQPKVLSSNALVFEAMLLMSEHGIHHLPIVDDERAVGVLTSTDIL 266
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 195 RQWGSNFSAPYAFIETLRERM-FKPS-------LSTIITENAKVAIVSPSDPVAVAAKKM 246
RQ+ F+ AF + LR + FK +S++++ N + ++ S V+ AAKKM
Sbjct: 121 RQFDRFFNR--AFAKRLRHQARFKAKELTTTSRVSSLMSNNPLIIDINAS--VSDAAKKM 176
Query: 247 REFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
RE R +S L++ K+ GILT +D+ RV+A+
Sbjct: 177 REARVSSVLVIDNHKLCGILTDRDLRNRVLAE 208
>gi|407786902|ref|ZP_11134046.1| cyclic nucleotide-binding protein [Celeribacter baekdonensis B30]
gi|407200853|gb|EKE70858.1| cyclic nucleotide-binding protein [Celeribacter baekdonensis B30]
Length = 605
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+ V L +T E T +SD R M V +V +T+ A L+G+VT +D+T +V+A+
Sbjct: 141 QHVSDLMAHAPVTCLETTTISDCARMMRDHMVSSVAVTEG-ARLTGLVTVRDMTNKVLAD 199
Query: 111 GLRPDQTV-VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DIT 166
L D T+ VS IM R+PI + +L + + M++ HLPVVE G ++ ++ DIT
Sbjct: 200 SL--DTTLPVSTIMARDPITLDPGALGTDVIHVMLENHIGHLPVVEGGTLVGMVTQTDIT 257
Query: 167 K 167
+
Sbjct: 258 R 258
>gi|146309557|ref|YP_001190022.1| hypothetical protein Pmen_4543 [Pseudomonas mendocina ymp]
gi|145577758|gb|ABP87290.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Pseudomonas mendocina ymp]
Length = 639
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 20/134 (14%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD----------------ANALLSG 96
V+KL A+++P T + + M V +V++ D N +++G
Sbjct: 153 VRKLISRGAVSVPLDTPIQQVAQVMTEHGVSSVIVVDPGTRWPDPQQVDVAEQQNQVMAG 212
Query: 97 IVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
I+TD+D+ TRV+A GL P T VS++MT NP+ + +D EA+ M++ HLP++
Sbjct: 213 ILTDRDLRTRVVAAGL-PSSTPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHHLPILHR 271
Query: 157 GE---VIAILDITK 167
V+A+ DI +
Sbjct: 272 RRPVGVVALADIVR 285
>gi|424660279|ref|ZP_18097526.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-16]
gi|408050762|gb|EKG85901.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE-16]
Length = 629
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK+L A I + + A +RMA V A+L+ D LL GIVT++D+
Sbjct: 152 VKQLLTRPAPAIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ QTV S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGMDVTQTV-SQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|261251372|ref|ZP_05943946.1| Signal transduction protein [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417952562|ref|ZP_12595621.1| hypothetical protein VIOR3934_20395 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260938245|gb|EEX94233.1| Signal transduction protein [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342819378|gb|EGU54224.1| hypothetical protein VIOR3934_20395 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 629
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL---------TDANALLSGIVTDKDI 103
V+ L ++A +IP+ + +A +MA V ++L+ D N L GI+TD+D+
Sbjct: 152 VRTLLTTEAPSIPKTESIQNAAIKMAEENVSSLLVIDPEVADDDEDDNNPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A+GL P+ VS +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAQGLDPNDE-VSSVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|421502435|ref|ZP_15949389.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
gi|400346867|gb|EJO95223.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
Length = 639
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 20/134 (14%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD----------------ANALLSG 96
V+KL A+++P T + + M V +V++ D N +++G
Sbjct: 153 VRKLISRGAVSVPLDTPIQQVAQVMTEHGVSSVIVVDPGTRWPDPQQVDVAEQQNQVMAG 212
Query: 97 IVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
I+TD+D+ TRV+A GL P T VS++MT NP+ + +D EA+ M++ HLP++
Sbjct: 213 ILTDRDLRTRVVAAGL-PSSTPVSQVMTPNPVTLQADDSVFEAMLCMLRNNIHHLPILHR 271
Query: 157 GE---VIAILDITK 167
V+A+ DI +
Sbjct: 272 RRPVGVVALADIVR 285
>gi|418056117|ref|ZP_12694171.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353210395|gb|EHB75797.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 139
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPD 115
+R + L + V +AC M + V +VL+ D + L GI T +D +++A+G +
Sbjct: 10 VRDQQPLLMQAADTVQNACEAMRVKHVGSVLVVDEHQRLLGIFTGRD-AVKLLAKG-KGG 67
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+T ++ MT NP+ + + AI+AL+ M G FRH+PVVE G ++ I+
Sbjct: 68 RTALANAMTPNPVTLIPEQQAIDALRAMSDGGFRHVPVVEKGRIVGIV 115
>gi|408380133|ref|ZP_11177721.1| cyclic nucleotide-binding protein [Agrobacterium albertimagni
AOL15]
gi|407745974|gb|EKF57502.1| cyclic nucleotide-binding protein [Agrobacterium albertimagni
AOL15]
Length = 608
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A M R V ++ + D L GI+T +D+ RV+AEGL PD T VS +MT +P+
Sbjct: 161 VRSAATLMRERHVSSLGVVDGGRFL-GILTTRDLAGRVLAEGLDPDATAVSAVMTADPVG 219
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL-YDAIS 174
+ ++L + L M++ + HLPVVE ++ ++ T + + AIS
Sbjct: 220 LPGEALGSDILHLMLERRVGHLPVVEGDRLVGMITQTDLIRFHAIS 265
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
+ +P+D V AA MRE +S +V G + GILT++D+ RV+A+ L P+ T V
Sbjct: 154 VCAPTDTVRSAATLMRERHVSSLGVVDGGRFLGILTTRDLAGRVLAEGLDPDATAV 209
>gi|402851205|ref|ZP_10899376.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402498575|gb|EJW10316.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 143
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+T+ + S TI T V+ A + + R + A+++T + + GIV+++DI +
Sbjct: 4 KTILDRKGSDVATIDPATSVATATKTLGERGIGALVVTGTESRVIGIVSERDIVRALGTR 63
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
G +T VS+IMTR T E +Q+M +GKFRH+PVVE+ +I I+ I +
Sbjct: 64 GGEVLETPVSEIMTRKVATCTQHDTIDELMQQMTEGKFRHVPVVEHDRLIGIVSIGDVVK 123
Query: 171 DAISRMEKAAE 181
+ +ME+ ++
Sbjct: 124 SRLEQMEQESD 134
>gi|384919536|ref|ZP_10019582.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Citreicella sp. 357]
gi|384466561|gb|EIE51060.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Citreicella sp. 357]
Length = 607
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 53 VKKLRLSKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
V+ L + LT+ PE T V A R MA R V +V +T LL GIVT +D++ +V+ G
Sbjct: 144 VETLMATAPLTLTPEAT-VQQAARMMAERNVSSVCITKDEDLL-GIVTIRDVSGKVVGAG 201
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
L P T V+++MT+ P+ + ++ + L M++ + H+PV E G ++ I+ D+T+
Sbjct: 202 L-PFDTPVARVMTQAPVTLPPSAIGSDVLHMMMERRIGHVPVTEGGRLVGIVTQTDLTR- 259
Query: 169 LYDAISRMEKAAE 181
+ A+S E +E
Sbjct: 260 -FQAVSSAELVSE 271
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA +RMA + + A+L+ + +A++ GIVT++D ++ G + T+V +MT + ++
Sbjct: 25 VFDALQRMADKGIGALLVMEGDAIV-GIVTERDYARKIALLGRKSSATLVRDVMTADVMY 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V + E + M + + RHLPVVE G+++ ++ I + D IS + EQ
Sbjct: 84 VQPAQTSEECMALMTENRLRHLPVVEGGKLVGLISIGDLVKDIISEQKFIIEQ 136
>gi|424045259|ref|ZP_17782824.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
gi|408886309|gb|EKM24983.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
Length = 620
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + G++TD+D+T RVIA+G+ D+ + S++MT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVSIDRPI-SEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 151 LPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
LP+VEN +V+ +L T + + AI +EK GS + + ERQ
Sbjct: 254 LPLVENNKVVGVLTTTHLVQNHRVQAIFLIEKIKYAGSVKSLSSFTPERQ 303
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA MA + VL+TD++ L+ GI T++D +V+ +GL V +MT NP
Sbjct: 25 VFDALSLMAQFDIGCVLVTDSDKLV-GIFTERDYARKVVLKGLVSRDVKVGDLMTPNPYT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V A + + M +FRH+PVVE G+V+ I+ I + +++ EK +Q
Sbjct: 84 VGLTGTADDVMATMTAKRFRHIPVVEEGKVLGIVTIGDMVKSIVTQHEKTIKQ 136
>gi|15616304|ref|NP_244609.1| hypothetical protein BH3742 [Bacillus halodurans C-125]
gi|10176366|dbj|BAB07461.1| BH3742 [Bacillus halodurans C-125]
Length = 643
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R ++ + A+T+ E +V + R+M +V++ + LSGI+T+KD+ RVIA
Sbjct: 172 RRIQDVMTEPAVTVQEQALVQEVARKMMDEGTSSVIVLNDENKLSGIITEKDLVGRVIAS 231
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
G Q ++MT+NP ++ + EA+ + K +HLPV E G + ++ ++ L
Sbjct: 232 GQSKTQKAY-EVMTKNPYTISRHAYYYEAMSMFLMNKIKHLPVEEAGRPLGMVTLSDLL 289
>gi|333909771|ref|YP_004483357.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
gi|333479777|gb|AEF56438.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
Length = 618
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M +RV ++L+T+ + L+ GIVTD+D+ TR +A+GL P T ++ IMT +PI + S
Sbjct: 173 AAQIMTEKRVSSLLITEQDELI-GIVTDRDLRTRALAKGL-PLDTPIATIMTPDPIVMDS 230
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
A EA+ KM++ HLPV+++ I ++
Sbjct: 231 RDYASEAVLKMMERNVHHLPVIKDNRPIGVV 261
>gi|157961522|ref|YP_001501556.1| hypothetical protein Spea_1697 [Shewanella pealeana ATCC 700345]
gi|157846522|gb|ABV87021.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella pealeana ATCC 700345]
Length = 615
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI V+ A R M + RV +VL+ D N L+ GI+TD+D+ RV+AE V +
Sbjct: 162 TIDMKASVAQASRLMRTSRVSSVLVIDNNKLV-GILTDRDLRNRVLAEN-HDGSLPVHQA 219
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT P+ + S+SL EA+ M + HLPVV+NG ++ T L
Sbjct: 220 MTTTPVSIESNSLVFEAMLLMSEHNIHHLPVVDNGVTTGVVTSTDIL 266
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 239 VAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQN 279
VA A++ MR R +S L++ +K+ GILT +D+ RV+A+N
Sbjct: 169 VAQASRLMRTSRVSSVLVIDNNKLVGILTDRDLRNRVLAEN 209
>gi|386816057|ref|ZP_10103275.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thiothrix nivea DSM 5205]
gi|386420633|gb|EIJ34468.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thiothrix nivea DSM 5205]
Length = 623
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
AC+ M ++T+A+ L GIVTD D RV+AEG R + VS IMT P+ +T
Sbjct: 174 ACQ-MNEFNAQTAMVTEADGSLCGIVTDVDFRKRVVAEG-RNVEEPVSGIMTPKPLTLTP 231
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
A EAL M + RHLPVVEN +V+ ++ T L
Sbjct: 232 RDQASEALLLMARRNIRHLPVVENADVVGVVSATDLL 268
>gi|359455324|ref|ZP_09244559.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
gi|358047667|dbj|GAA80808.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
Length = 612
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++T +A L G+VTD+D
Sbjct: 141 SKNDSWSERKISELMARTAITLAPDASIRQSAKKMKQHGVSSIMIT-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q VS IMT P F+ ++ AL M++ HLPV+ EN + I
Sbjct: 200 LRNRVLADEVNP-QDAVSSIMTAKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPIG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
>gi|254509720|ref|ZP_05121787.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Rhodobacteraceae bacterium KLH11]
gi|221533431|gb|EEE36419.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Rhodobacteraceae bacterium KLH11]
Length = 607
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T+ L T P T V A R M R + ++ +T+ +ALL GI T +DI+ + +A+
Sbjct: 143 TIDILMAHDPATCPPDTPVQTAARIMRDRHISSLCVTEGDALL-GIATLRDISGKFVADA 201
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
+ P T VS IMT NPI + + + L M++ H+P+VE G+++ I+ D+T
Sbjct: 202 M-PAATPVSSIMTANPITLAPSDIGSDVLHTMMERGIGHIPIVEAGQLVGIVTQTDLTH- 259
Query: 169 LYDAISRME 177
Y A++ E
Sbjct: 260 -YQAVNSGE 267
>gi|414071271|ref|ZP_11407243.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
gi|410806345|gb|EKS12339.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
Length = 612
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++T +A L G+VTD+D
Sbjct: 141 SKNDSWSERKISELMARTAITLAPDASIRQSAKKMKQHGVSSIMIT-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q VS IMT P F+ ++ AL M++ HLPV+ EN + I
Sbjct: 200 LRNRVLADEVNP-QDAVSSIMTAKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPIG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
>gi|397170405|ref|ZP_10493821.1| hypothetical protein AEST_15870 [Alishewanella aestuarii B11]
gi|396088072|gb|EJI85666.1| hypothetical protein AEST_15870 [Alishewanella aestuarii B11]
Length = 606
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A R M+ +RV ++L+ D N L+ GI+TD+D+ +RV+A GL P T + ++MT P
Sbjct: 161 VQQAARLMSEKRVSSLLVEDDNRLI-GILTDRDLRSRVLAAGL-PTTTAIKEVMTPKPYT 218
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENG 157
+ + EA+Q M + HLPVV+ G
Sbjct: 219 IEKHAYLFEAVQLMSRFNVHHLPVVDQG 246
>gi|407798046|ref|ZP_11144959.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
gi|407059883|gb|EKE45806.1| CBS domain protein [Oceaniovalibus guishaninsula JLT2003]
Length = 142
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ G+ VS+A R ++ +R+ AV++ D + +GI++++DI + G V
Sbjct: 15 VTVAPGSKVSEAARLLSEKRIGAVIVADGDKP-AGILSERDIVRELGRRGTSCLDDPVDA 73
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKA 179
+MTR+P+ T L++M +G+FRH+PV+E+G ++ ++ I + +++ ME+
Sbjct: 74 LMTRDPVACTPQDRTDAVLERMTEGRFRHMPVIEDGRMVGLISIGDVVKARLAQLAMERD 133
Query: 180 AEQG 183
A +G
Sbjct: 134 ALEG 137
>gi|317126516|ref|YP_004100628.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Intrasporangium calvum DSM 43043]
gi|315590604|gb|ADU49901.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Intrasporangium calvum DSM
43043]
Length = 620
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL---RPDQTVVSKIMT 124
T + +A MA +V ++L+ D L +GIVTD+D+ TRV+A GL RP VS IMT
Sbjct: 170 TTIREAAELMAREQVSSLLVVDGERL-TGIVTDRDLRTRVLAAGLETTRP----VSAIMT 224
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
+P+ + D LA+E + +M H+PVVE + +L T + R+E+A
Sbjct: 225 PDPVTSSPDDLAMELVLQMTSRNIHHMPVVEGDRPLGMLTSTDLM-----RLERA 274
>gi|254470144|ref|ZP_05083548.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|374332317|ref|YP_005082501.1| hypothetical protein PSE_3975 [Pseudovibrio sp. FO-BEG1]
gi|211960455|gb|EEA95651.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
gi|359345105|gb|AEV38479.1| CBS domain containing protein [Pseudovibrio sp. FO-BEG1]
Length = 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV--VSKIMTRNP 127
+S+ C + RR+ A++L D ++ GIV+++D+ + EG PD VS+ MT+
Sbjct: 23 LSEICASLGGRRIGAIVLCDEPGVIVGIVSERDVVQAIAMEG--PDVLAQPVSEYMTKEV 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
T + +M +G+FRH+PVVE+G++I ++ I + I+++E+ A+
Sbjct: 81 AVCTEADSVNGVMARMTEGRFRHMPVVEDGKLIGLVSIGDIVKFRIAQVEREADD 135
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DACR + + A+ + D LL GI++++D+ RVI P T VS++MT P+
Sbjct: 24 VRDACRILDEHAIGALPVLDGGKLL-GILSERDVIRRVIVRDRDPSATKVSEVMTPEPLT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+++ A+ KM+ G FRHLPV EV+ +L
Sbjct: 83 ISAQGTLATAMGKMLDGGFRHLPVTRANEVVGML 116
>gi|328951661|ref|YP_004368996.1| signal transduction protein with CBS domains [Marinithermus
hydrothermalis DSM 14884]
gi|328451985|gb|AEB12886.1| putative signal transduction protein with CBS domains
[Marinithermus hydrothermalis DSM 14884]
Length = 135
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P V+DA R MA V +V++ + + G++TD+DIT RV+AEGL P+ T V +
Sbjct: 12 VTVPPSASVADAARLMADINVGSVVVVEGLRPV-GVLTDRDITVRVVAEGLDPEATPVRR 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+MT +P+ + + EAL+++ R PVV+ G ++ I + L+
Sbjct: 71 VMTPDPVTLGEELSLFEALEEVKDKAIRRFPVVDPEGRLVGIFTLDDVLH 120
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
V V PS VA AA+ M + S ++V G + G+LT +D+ +RVVA+ L PE T V
Sbjct: 10 DVVTVPPSASVADAARLMADINVGSVVVVEGLRPVGVLTDRDITVRVVAEGLDPEATPVR 69
Query: 289 RFI 291
R +
Sbjct: 70 RVM 72
>gi|77165478|ref|YP_344003.1| hypothetical protein Noc_2011 [Nitrosococcus oceani ATCC 19707]
gi|76883792|gb|ABA58473.1| CBS domain containing protein [Nitrosococcus oceani ATCC 19707]
Length = 286
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A R M + + A+++ D ++ GIVTD+D+ R + L P+ T ++++MT +P+
Sbjct: 20 VLEAARAMENNSIGAIVVQDHGRIV-GIVTDRDLAVRALGHKLDPENTAITEVMTPSPLM 78
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+T EA+ M QG R +P+ EN V+ ++ + L D + +E+ A
Sbjct: 79 LTLADSREEAIALMQQGNVRRIPLSENNRVVGMVTLDDLLLDEAAPLEELA 129
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T V +A MA + + A+ + D LL GI+T++D +VI EG T VS IM+
Sbjct: 23 PDAT-VYEAIELMAEKNIGALPVVDRGRLL-GILTERDYARKVILEGKSSKDTSVSAIMS 80
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
R+PI VT E ++ M + RHLPV+E G+ + IL I + IS +Q
Sbjct: 81 RSPITVTPADTVGECMRIMTDKRVRHLPVMEGGDFVGILSIGDVVRWMISAQTATIDQ 138
>gi|427431006|ref|ZP_18920702.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
gi|425878183|gb|EKV26902.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
Length = 150
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T+ + A M R + AV++ L+ GI+T++DI R +A G+ P T V +IMT
Sbjct: 20 PETTVRT-AAELMRDRNIAAVMIVRDERLI-GIMTERDIAARAVARGVDPQTTRVEEIMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
+P + +D A+ AL+ M + +RHLPVV++G + ++ I + LY
Sbjct: 78 ADPDTLEADDPAMTALKMMREHNYRHLPVVKDGRPVGMVSI-RDLY 122
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 223 IITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
II ++IV+P V AA+ MR+ + +IV ++ GI+T +D+ R VA+ + P
Sbjct: 8 IIPREQTLSIVAPETTVRTAAELMRDRNIAAVMIVRDERLIGIMTERDIAARAVARGVDP 67
Query: 283 ELTLVERFI 291
+ T VE +
Sbjct: 68 QTTRVEEIM 76
>gi|323493391|ref|ZP_08098513.1| hypothetical protein VIBR0546_13760 [Vibrio brasiliensis LMG 20546]
gi|323312214|gb|EGA65356.1| hypothetical protein VIBR0546_13760 [Vibrio brasiliensis LMG 20546]
Length = 629
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA---------NALLSGIVTDKDI 103
V+ L +A +IP+ + +A +MA V ++L+ D N+ L GI+TD+D+
Sbjct: 152 VRTLLTGEAPSIPKTESIQNAAIKMAEENVSSLLIIDPEVADDDEDDNSPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A+GL P V S +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAQGLDPSDDVAS-VMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|212640085|ref|YP_002316605.1| hypothetical protein Aflv_2263 [Anoxybacillus flavithermus WK1]
gi|212561565|gb|ACJ34620.1| Multidomain protein (contains CAP-ED, 2CBS and a predicted
nucleotidyltransferase domains) [Anoxybacillus
flavithermus WK1]
Length = 611
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + + +T+P V +A ++MA+ + ++++TD L GI+T+ D+ RV+ + L
Sbjct: 158 VQDVMIRDVVTLPPTATVQEAAKKMAATHISSIVVTDEQTL-CGILTETDLVERVLGQSL 216
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
P TVV ++MT++ ++ + +AL M++ +HLPVV++G+V I+ + +
Sbjct: 217 -PYDTVVERVMTKDVATISRFAYYYDALALMIERGVKHLPVVDDGKVQGIVTFSDLM 272
>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 174
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSK 121
P+ TI + + + +R+ AV++TD N L GI++++DI R+ P QT+ V
Sbjct: 51 PDDTIHT-VVQILKDKRIGAVVVTDQNGALQGILSERDIVRRMADT---PGQTLPQSVQD 106
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+MTR T D L IE ++ M +G+FRH+PV+ +G + ++ I + + +E A
Sbjct: 107 LMTREVRTCTPDDLLIEVVKTMTEGRFRHMPVLRDGHLCGVITIGDVVQFRLKELEYEA 165
>gi|375111665|ref|ZP_09757869.1| hypothetical protein AJE_16894 [Alishewanella jeotgali KCTC 22429]
gi|374568301|gb|EHR39480.1| hypothetical protein AJE_16894 [Alishewanella jeotgali KCTC 22429]
Length = 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A R M+ +RV ++L+ D N L+ GI+TD+D+ +RV+A GL P T + ++MT P
Sbjct: 161 VQQAARLMSEKRVSSLLVEDDNRLI-GILTDRDLRSRVLAAGL-PPTTAIKEVMTPKPYT 218
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENG 157
+ + EA+Q M + HLPVV+ G
Sbjct: 219 IEKHAYLFEAVQLMSRFNVHHLPVVDQG 246
>gi|24374385|ref|NP_718428.1| putative nucleotidyltransferase DUF294 [Shewanella oneidensis MR-1]
gi|24348950|gb|AAN55872.1| putative nucleotidyltransferase DUF294 [Shewanella oneidensis MR-1]
Length = 620
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ L S +TI V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL
Sbjct: 152 ISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGL 210
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
Q V + MT +PI ++S++L EA+ M + HLP+++
Sbjct: 211 -DGQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIID 252
>gi|375266020|ref|YP_005023463.1| Signal transduction protein [Vibrio sp. EJY3]
gi|369841341|gb|AEX22485.1| Signal transduction protein [Vibrio sp. EJY3]
Length = 629
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK L TI G + +A + MA V ++L+ D + + + GIVTD+D+
Sbjct: 152 VKTLLTRDTPTIERGQSIQEAAKIMAEDNVSSLLIIDPDFVRDEDDPQSPVLGIVTDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+AEGL P + V + +MT I + ++ EA+ KM++ HLPVV++ + I I+
Sbjct: 212 CARVLAEGLSPHEDVAT-VMTTEVISLDHNAYIYEAMLKMLRYNVHHLPVVKDQQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|358451698|ref|ZP_09162131.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224167|gb|EHJ02699.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 624
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIA 109
V +L + ++ P + +A R M V A+LL D LL GI+TD+D+ TR ++
Sbjct: 152 VTRLIAREPVSAPHTVRLQEAARIMTENGVSALLLMDEEGEKPLLKGIITDRDLRTRALS 211
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDIT 166
E L +T +S+IM+ + I + S+ EA+ M+ HLPV++ E VIA+ DI
Sbjct: 212 EAL-ASETPISEIMSEDLITIRSNMFIFEAMLTMLHNNVHHLPVMDRDEVRGVIALSDIV 270
Query: 167 K 167
K
Sbjct: 271 K 271
>gi|220922102|ref|YP_002497403.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219946708|gb|ACL57100.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 148
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ C R+ V A+++ + L+ GI++++D+ TRVIA P T+V ++MTR+P
Sbjct: 24 VARVCLRLREYGVGALVVLEERRLV-GIISERDVATRVIAGHRDPMLTLVREVMTRDPET 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+ +++ EA ++M+ G FRHLPV+ EVI ++ +
Sbjct: 83 IAAEASLAEAYRRMLTGGFRHLPVMRGQEVIGMISLC 119
>gi|119774661|ref|YP_927401.1| hypothetical protein Sama_1524 [Shewanella amazonensis SB2B]
gi|119767161|gb|ABL99731.1| CBS domain protein [Shewanella amazonensis SB2B]
Length = 618
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV-VS 120
LTI + A M RV ++L+TD + L GI+TD+D+ RV+AEG D T+ V
Sbjct: 164 LTIDCNHSIRQAAVMMRDARVSSLLVTDHHKL-CGILTDRDLRNRVLAEGF--DGTLPVH 220
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+ MTRNP+ + + +L EA+ M + HLPV+E + ++ T L
Sbjct: 221 QAMTRNPVTIGAGALVFEAMLAMSERNIHHLPVLEGDTPVGVISSTDIL----------R 270
Query: 181 EQGSAIAAAVEGVERQ 196
QGS + +ERQ
Sbjct: 271 SQGSQPLMLIGEIERQ 286
>gi|335036447|ref|ZP_08529774.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
gi|333792338|gb|EGL63708.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
Length = 144
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ +V++TDA+ ++ GI T++D+ V +G Q VS MT+N +
Sbjct: 25 IGEAAGTLHAHKIGSVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVR 84
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+S + ++ M G+FRH+PV ENG + I+ I + I +E AE
Sbjct: 85 CQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEH 137
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 51 RTVKKLRLSKA---LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
+TV++L K L++ ++V DA + MA RV A+L+ AL+ GI +++D V
Sbjct: 2 KTVRQLLEEKGNTILSVGPDSLVYDALKIMAEYRVGALLVMRGQALV-GIFSERDYAREV 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ +G T VS IM+ I V+ D E + M + RHLPV+E+G+V+ +L I
Sbjct: 61 VLKGKTSKTTPVSDIMSHQVITVSPDQTVDECMNLMSGKRIRHLPVIEHGQVVGVLSI 118
>gi|344340880|ref|ZP_08771803.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799125|gb|EGV17076.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 144
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A MA+ RV A+ + DA L+ G+ T++D+ RV+A+ L+P ++S +MT PI
Sbjct: 24 VQEAAELMAAHRVGAIPVVDAGKLV-GLFTERDLLNRVVAKRLQPVDVLLSAVMTERPIS 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
V +E L M + FRHLPV+ V+ +L
Sbjct: 83 VEPGVSLVEGLGIMSENGFRHLPVLAENRVLGVL 116
>gi|385333692|ref|YP_005887643.1| signal-transduction protein [Marinobacter adhaerens HP15]
gi|311696842|gb|ADP99715.1| signal-transduction protein [Marinobacter adhaerens HP15]
Length = 624
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIA 109
V +L + ++ P + +A R M V A+LL D LL GI+TD+D+ TR ++
Sbjct: 152 VTRLIAREPVSAPHTVRLQEAARIMTENGVSALLLMDEEGEKPLLKGIITDRDLRTRALS 211
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDIT 166
E L +T +S+IM+ + I + S+ EA+ M+ HLPV++ E VIA+ DI
Sbjct: 212 EAL-ASETPISEIMSEDLITIRSNMFIFEAMLTMLHNNVHHLPVMDRDEVRGVIALSDIV 270
Query: 167 K 167
K
Sbjct: 271 K 271
>gi|163746629|ref|ZP_02153986.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
gi|161379743|gb|EDQ04155.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
Length = 144
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
K +T G +S+A +A +R+ ++++ GI++++DI + +G Q
Sbjct: 13 DKVVTTKPGLAISEAAAMLAEKRIGTLVISADGKTPDGILSERDIVRELGRQGAGCLQQT 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISR 175
V IMT + + D + LQKM G+FRH+PV+ENGE++ ++ D+ K +S
Sbjct: 73 VESIMTTKLVTCSRDDRSDAILQKMTDGRFRHMPVLENGELVGLISLGDVVKAQLMELS- 131
Query: 176 MEKAAEQG 183
MEK A +G
Sbjct: 132 MEKQALEG 139
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 51 RTVKKL---RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
R VK L + +K +I V +A +RMA R+ A+++ +AL+ G+++++D +V
Sbjct: 2 RQVKHLLEGKGNKIFSIEPDVPVLEAIKRMAEYRIGALMVMRGSALV-GVMSERDYARKV 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---D 164
+ +G QT VS IM+ PI V+ D+ + ++ + RHLPVV+ +V+ ++ D
Sbjct: 61 LLQGRSSSQTAVSDIMSGTPITVSPDTDVFDCMRLCTDSRIRHLPVVDGEQVVGVISIGD 120
Query: 165 ITKCLYDA 172
+ K + DA
Sbjct: 121 LVKAVIDA 128
>gi|374853591|dbj|BAL56495.1| hypothetical conserved protein [uncultured alpha proteobacterium]
Length = 152
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 50 ERTVKKL--RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
+R V+++ R PE T V A M +V++ DA + GI T++D+T RV
Sbjct: 10 QRPVREILSRPEPVTATPE-TTVRRAAELMTEHACGSVVVVDAAGRVVGIFTERDLTRRV 68
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
+A GL PD T +S +MT P + +D+ +A++ M + ++HLPV++ +I ++
Sbjct: 69 VAAGLDPDTTPLSAVMTPEPDTIAADAPVADAIRHMDECGYKHLPVLDGERLIGVVAPED 128
Query: 168 CLYDAISRMEKAAEQGSAIAAAVEGVERQW 197
+ I+++ + +A ER W
Sbjct: 129 IPFAEIAQLADELDSRHRLA------ERMW 152
>gi|227504455|ref|ZP_03934504.1| cyclic nucleotide-binding protein [Corynebacterium striatum ATCC
6940]
gi|227199103|gb|EEI79151.1| cyclic nucleotide-binding protein [Corynebacterium striatum ATCC
6940]
Length = 617
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T +S A + M+ ++L+ D L +GIVTD+D+ +RV+A G P Q +++IMT P
Sbjct: 168 TSISAAAQLMSEHGASSLLVVDGGEL-TGIVTDRDLRSRVLALGRDP-QEAIAEIMTCTP 225
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
+ V + + A+EAL M + HLPVV G++ I+ DIT+ L
Sbjct: 226 VTVNASAPAMEALLHMAERGIHHLPVVAKGQLRGIVTQSDITRLL 270
>gi|397689681|ref|YP_006526935.1| signal-transduction protein with CBS domains [Melioribacter roseus
P3M]
gi|395811173|gb|AFN73922.1| putative signal-transduction protein with CBS domains
[Melioribacter roseus P3M]
Length = 142
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 51 RTVKKLRLSKAL-TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
+T+K+L ++ + T+ GT V+DA MA + V + D L G+ +++D+ RVIA
Sbjct: 2 KTIKELLQNRNIYTVKTGTSVADAVSFMAEHNIGLVPVLDDEGKLVGVFSERDLVKRVIA 61
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+GL + T + +MTR + + E L+KM RHL ++ENG++ IL
Sbjct: 62 KGLNINSTKIDDVMTRELVLADINESHQECLKKMKDKGTRHLLIIENGKLAGIL 115
>gi|372278663|ref|ZP_09514699.1| CBS domain-containing protein [Oceanicola sp. S124]
Length = 173
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 29 NLSKPPSPQGESSSSV--GGAGGERTVKKLRLSKALTI----PEGTIVSDACRRMASRRV 82
+L K +PQ SS SV A G V ++ K +T+ PE T+ A + R+
Sbjct: 8 HLRKDDAPQRTSSQSVVSNTAPGRARVSEVLAGKDVTLYTISPEQTL-HRAVEMLRDHRI 66
Query: 83 DAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSKIMTRNPIFVTSDSLAIEA 139
A+L+TD +A L GI++++DI R +A+ P +T+ V ++MTR D L +
Sbjct: 67 GALLVTDIDAKLVGILSERDIV-RKLADA--PGRTLPHRVEEVMTRAVETCAPDDLLRDV 123
Query: 140 LQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
LQ+M G+FRH+PV+E + ++ I ++ + ++E A
Sbjct: 124 LQRMTDGRFRHMPVLEEQHLTGLVTIGDLVHFRLRQLELEA 164
>gi|307945500|ref|ZP_07660836.1| signal-transduction protein [Roseibium sp. TrichSKD4]
gi|307771373|gb|EFO30598.1| signal-transduction protein [Roseibium sp. TrichSKD4]
Length = 143
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T++SD C +A ++ A+++ D + GI++++DI + G + VS++MT++
Sbjct: 21 TLLSDICTTLAEHKIGAIVIADDAGHIEGIISERDIVKAIGTSGPTALEKPVSEVMTKSV 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ T + KM G+FRH+PV ++G+V ++ I + I++ E AEQ
Sbjct: 81 VTCTDADSVNAVMAKMSAGRFRHVPVTDDGKVTGVISIGDVVKFKIAQAEMEAEQ 135
>gi|254434216|ref|ZP_05047724.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
gi|207090549|gb|EDZ67820.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
Length = 267
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A R M + + A+++ D ++ GIVTD+D+ R + L P+ T ++++MT +P+ +T
Sbjct: 3 EAARAMENNSIGAIVVQDHGRIV-GIVTDRDLAVRALGHKLDPENTAITEVMTPSPLMLT 61
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
EA+ M QG R +P+ EN V+ ++ + L D + +E+ A
Sbjct: 62 LADSREEAIALMQQGNVRRIPLSENNRVVGMVTLDDLLLDEAAPLEELA 110
>gi|148656138|ref|YP_001276343.1| hypothetical protein RoseRS_2007 [Roseiflexus sp. RS-1]
gi|148568248|gb|ABQ90393.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Roseiflexus sp. RS-1]
Length = 623
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVL-------LTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +P T + +A RRM + A++ + DA SGIVTD D+ RV+AEGL
Sbjct: 163 VVVPPNTTILEAARRMRDAQASALIVDLPPYGMLDAG---SGIVTDSDLRNRVVAEGL-- 217
Query: 115 DQTV-VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
D T ++ +M+ I V +DSL E L KM++ RHL + +G++I I++ L
Sbjct: 218 DYTTPIAHVMSAPAITVPADSLVFEGLLKMIEHGVRHLALSRDGQIIGIVNYRDFL 273
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+P T V++A R+ R+ A+L++D + GIV+++D+ + G R V IM
Sbjct: 18 VPWAT-VAEAVERLEKYRIGALLVSDGENRIRGIVSERDVIRELARRGNRLLSCNVEDIM 76
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
TRN V+S A+ +M +G++RHLPVV+ G ++ ++ I + + ME
Sbjct: 77 TRNVATVSSTESLTYAMAQMTRGRYRHLPVVDGGRLVGMVSIGDLVNHRVREME 130
>gi|168704059|ref|ZP_02736336.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
Length = 133
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD-ITTRVIAEGL--RPDQTV 118
+T+ G + DA RRM R AVL+T L GI+T++D +T + A G RP
Sbjct: 19 ITVDAGATLGDAVRRMIDGRTGAVLVTGPGGELVGILTERDFLTKKTGAPGFEARP---- 74
Query: 119 VSKIMTRNPIFVT-SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
V + MT P VT +D+LA AL KM G +RHLPVVE G + ++ +
Sbjct: 75 VREFMTLAPETVTPTDTLAF-ALGKMDAGAYRHLPVVEGGRPVGVISV 121
>gi|86137280|ref|ZP_01055857.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. MED193]
gi|85825615|gb|EAQ45813.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. MED193]
Length = 607
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T G A + M + V ++D + LL GI+T +D+T +++AEGL P T VS+
Sbjct: 153 VTCSPGLTCQGAAQLMRQHHISCVCISDGDELL-GILTTRDLTEKLLAEGL-PISTPVSQ 210
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
+MT++P + ++ + L M++ H+PVV+N +++ I+ D+T+ + A+S E
Sbjct: 211 VMTKDPRSLPPSAIGSDVLHAMMEHHIGHIPVVQNQQLVGIITQTDLTR--FQAVSSAEL 268
Query: 179 AAEQGSAIAA 188
+ A++A
Sbjct: 269 VSSIARAMSA 278
>gi|209693723|ref|YP_002261651.1| cyclic nucleotide binding protein [Aliivibrio salmonicida LFI1238]
gi|208007674|emb|CAQ77785.1| putative cyclic nucleotide binding protein [Aliivibrio salmonicida
LFI1238]
Length = 626
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD-------ANALLSGIVTDKDITT 105
VK L +A+ I + + A + MA V AVL+TD + GI+TD+D+ T
Sbjct: 153 VKTLLTREAVMITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCT 212
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+V+A GL D T VS++M+ I + ++ EA+ M++ HLPV+ N + I +L++
Sbjct: 213 KVLACGLDFD-TPVSEVMSTELISLDHNAYVFEAMLMMLRYNVHHLPVLRNKQPIGVLEV 271
Query: 166 T 166
+
Sbjct: 272 S 272
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT+ + T V+DA ++ +V AV++++ GIV+++DI + A G VS
Sbjct: 16 LTVTKDTSVADASAILSREKVGAVIVSEDGVHPQGIVSERDIVRELGARGTGCLTDPVSA 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMT I AI LQKM +G+FRH+PV++ E++ ++ I + +R+E+ +
Sbjct: 76 IMTEKLIGCVPGDRAIAVLQKMTEGRFRHMPVMDGDEMVGLVSIGDVVK---ARLEELGQ 132
Query: 182 QGSAIAAAVEG 192
Q ++ + + G
Sbjct: 133 QAESLKSMIMG 143
>gi|392535144|ref|ZP_10282281.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas arctica A
37-1-2]
Length = 612
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++T +A L G+VTD+D
Sbjct: 141 SKNDSWSERKISELMTRTAITLTPDASIRQSAKKMKEHGVSSIMIT-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q VS IMT P F+ ++ AL M++ HLPV+ EN I
Sbjct: 200 LRNRVLADEVDP-QDAVSSIMTAKPKFIFENNRVFSALHLMLKYNIHHLPVLDENHNPIG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
>gi|126665476|ref|ZP_01736458.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
gi|126630104|gb|EBA00720.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
Length = 685
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA---NALLSGIVTDKDITTRVIA 109
V +L K ++ P + +A R M V A+LL + A L GI+TD+D+ R +
Sbjct: 212 VSRLISRKTVSAPYTVRLQEAARIMTENSVSALLLMEGEGDQARLKGIITDRDLRIRAVT 271
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDIT 166
E L P +T +S IMT I + + EA+ M+ HLPV+++ E VIA+ DI
Sbjct: 272 EAL-PSETPISDIMTEGLITIPASHYIFEAMLTMLHNNVHHLPVMDDHEVRGVIALSDIV 330
Query: 167 K 167
K
Sbjct: 331 K 331
>gi|295696937|ref|YP_003590175.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
gi|295412539|gb|ADG07031.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
Length = 139
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L ++ + + DA R M V +V + D + L+ GI TD+DI + IA G
Sbjct: 3 LKDLMTTQVSYVSPASTCKDAARVMNDINVGSVPVVDKDKLV-GICTDRDIVLKCIAAGK 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P T V MT NPI T D A +A M Q + R LPVV+ G+++ ++ I A
Sbjct: 62 DPATTAVKDCMTANPITGTPDMDAHQASDLMSQHQIRRLPVVDQGKLVGMVAIGDLAVTA 121
Query: 173 ISRMEKAAEQGSAIAAAVEGVE 194
I + E G A++ +GV
Sbjct: 122 IHQ----DEAGEALSGISQGVH 139
>gi|333909359|ref|YP_004482945.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
gi|333479365|gb|AEF56026.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
Length = 621
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSL 135
RM RV ++L+ + +LL GIVTD+D+ +R++A G Q VVS IMT +P+ ++ D+L
Sbjct: 179 RMTEARVSSILILENESLL-GIVTDRDLRSRILALG-GSAQAVVSDIMTHSPVTLSPDAL 236
Query: 136 AIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
++A M + HLP+VE G+V+ +L
Sbjct: 237 VMQAQTLMSESNIHHLPIVEETGKVVGML 265
>gi|359443777|ref|ZP_09233598.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20429]
gi|358034333|dbj|GAA69847.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20429]
Length = 612
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++T +A L G+VTD+D
Sbjct: 141 SKNDSWSERKISELMTRTAITLTPDASIRQSAKKMKEHGVSSIMIT-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q VS IMT P F+ ++ AL M++ HLPV+ EN I
Sbjct: 200 LRNRVLADEVDP-QDAVSSIMTAKPKFIFENNRVFSALHLMLKYNIHHLPVLDENHNPIG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
>gi|359435313|ref|ZP_09225528.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20652]
gi|357918028|dbj|GAA61777.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20652]
Length = 612
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++T +A L G+VTD+D
Sbjct: 141 SKNDSWSERKISELMTRTAITLTPDASIRQSAKKMKEHGVSSIMIT-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIA 161
+ RV+A+ + P Q VS IMT P F+ ++ AL M++ HLPV+ EN I
Sbjct: 200 LRNRVLADEVDP-QDAVSSIMTAKPKFIFENNRVFSALHLMLKYNIHHLPVLDENHNPIG 258
Query: 162 ILDITKCL 169
++ T L
Sbjct: 259 MITSTDLL 266
>gi|335039572|ref|ZP_08532730.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Caldalkalibacillus thermarum
TA2.A1]
gi|334180532|gb|EGL83139.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Caldalkalibacillus thermarum
TA2.A1]
Length = 646
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V L S + + ++ A R+M + +V +V++ D + +GI+T D+ ++ AE
Sbjct: 175 RRVHDLMSSPVIAVEVTDTIAHAARQMMNHQVSSVVVMDKGRM-AGIITKSDLVRQMAAE 233
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI----- 165
+ + V M+ NP+ +TSDS +AL + +HLPV +NG VI +L +
Sbjct: 234 H-QVQGSTVGLWMSPNPLTITSDSYYYQALAIFLTENIKHLPVTKNGRVIGMLTLADLMR 292
Query: 166 --TKCLYDAISRMEKAAEQGSAIAAAVEGV 193
+ L+D+I +EKA + S ++ EG+
Sbjct: 293 KKNRGLFDSIQAIEKA--EASQLSQIKEGI 320
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA RMA + + A+L+T+ +A++ GI+T++D + +++ G T+V MT +F
Sbjct: 25 VFDALERMAEKGIGALLVTEGDAIV-GILTERDYSRKIVLMGRTSAATLVRDAMTTPVMF 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V S + + +Q M + RHLPVV++G+++ ++ I + + IS + EQ
Sbjct: 84 VRSSQTSEQCMQLMTTNRVRHLPVVDDGKLVGMVSIGDLVKNIISEQKFIIEQ 136
>gi|110739694|dbj|BAF01754.1| hypothetical protein [Arabidopsis thaliana]
Length = 280
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI T KDI RV+AE L P +T+V +MT+NP D+ +EAL M +GKF HLPV
Sbjct: 1 LRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 60
Query: 154 VE 155
+
Sbjct: 61 TD 62
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 262 IQGILTSKDVLMRVVAQNLSPELTLVE 288
++GI TSKD+LMRVVA+NL P TLVE
Sbjct: 1 LRGIFTSKDILMRVVAENLPPSETLVE 27
>gi|120553209|ref|YP_957560.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
gi|387812658|ref|YP_005428135.1| nucleotidyltransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|120323058|gb|ABM17373.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
gi|381337665|emb|CCG93712.1| Cyclic nucleotide-binding:CBS; Putative nucleotidyltransferase
DUF294CBS [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 625
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA---LLSGIVTDKDITTRVIA 109
V +L + ++ P + +A R M V A+LL D + L GI+TD+D+ TR +
Sbjct: 152 VTRLIAREPVSAPTTVRLQEAARIMTDNGVSALLLMDESGDSPRLKGIITDRDLRTRAVT 211
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDIT 166
L P +T +S+IM+ I +++ S EA+ M+ HLPV+E+ E VIA+ DI
Sbjct: 212 NAL-PSETPISEIMSEGLITISARSYIFEAMLTMLHNNVHHLPVMEDHEVRGVIALSDIV 270
Query: 167 K 167
K
Sbjct: 271 K 271
>gi|120598469|ref|YP_963043.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
gi|120558562|gb|ABM24489.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
Length = 615
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL + V + MT +PI
Sbjct: 169 VTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGL-DGRLAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ G+ I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDEGKAIGMVTSTDIL 266
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 206 AFIETLR-ERMFKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALI 256
AF + LR E FK + +T ++++ + SDP+ + AA MR R +S L+
Sbjct: 130 AFAKRLRHEARFK---AKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLV 186
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
K+ GILT KD+ RV+A L L +
Sbjct: 187 TDNHKLVGILTDKDLRNRVLAVGLDGRLAV 216
>gi|409200171|ref|ZP_11228374.1| hypothetical protein PflaJ_02480 [Pseudoalteromonas flavipulchra
JG1]
Length = 631
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA-----------NALLSGIVTDK 101
V+KL L + + V A + MA V ++L+ D + + G+++D+
Sbjct: 152 VRKLLLRDVVYVERNATVQQAAQVMAKEHVSSLLIYDPEKPVVEDPDEDDGQVVGLISDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+AEGL QT VS+IM+ + I V S++ EA+ M++ HLPVV + I
Sbjct: 212 DLRTKVVAEGLNY-QTPVSEIMSTDLIIVDSNAYVFEAMMLMLRDNVHHLPVVHKRKPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VVALSDIL 278
>gi|386314130|ref|YP_006010295.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella putrefaciens 200]
gi|319426755|gb|ADV54829.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella putrefaciens 200]
Length = 615
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL + V + MT +PI
Sbjct: 169 VTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGL-DGRLAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ G+ I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDEGKAIGMVTSTDIL 266
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 206 AFIETLR-ERMFKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALI 256
AF + LR E FK + +T ++++ + SDP+ + AA MR R +S L+
Sbjct: 130 AFAKRLRHEARFK---AKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLV 186
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
K+ GILT KD+ RV+A L L +
Sbjct: 187 TDNHKLVGILTDKDLRNRVLAVGLDGRLAV 216
>gi|146293453|ref|YP_001183877.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
gi|145565143|gb|ABP76078.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
Length = 615
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL + V + MT +PI
Sbjct: 169 VTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGL-DGRLAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ G+ I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDEGKAIGMVTSTDIL 266
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 206 AFIETLR-ERMFKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALI 256
AF + LR E FK + +T ++++ + SDP+ + AA MR R +S L+
Sbjct: 130 AFAKRLRHEARFK---AKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLV 186
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
K+ GILT KD+ RV+A L L +
Sbjct: 187 TDNHKLVGILTDKDLRNRVLAVGLDGRLAV 216
>gi|392544295|ref|ZP_10291432.1| hypothetical protein PpisJ2_21092 [Pseudoalteromonas piscicida JCM
20779]
Length = 631
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA-----------NALLSGIVTDK 101
V+KL L + + V A + MA V ++L+ D + + G+++D+
Sbjct: 152 VRKLLLRDVVYVERNATVQQAAQVMAKEHVSSLLIYDPEKPVVEDPDEDDGQVVGLISDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+AEGL QT VS+IM+ + I V S++ EA+ M++ HLPVV + I
Sbjct: 212 DLRTKVVAEGLNY-QTPVSEIMSTDLIIVDSNAYVFEAMMLMLRDNVHHLPVVHKRKPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VVALSDIL 278
>gi|320449818|ref|YP_004201914.1| hypothetical protein TSC_c07380 [Thermus scotoductus SA-01]
gi|320149987|gb|ADW21365.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 582
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
IP V +A RRM + + LL +A+ L GI+TD+D+ RV+AEG RP T V+++M
Sbjct: 149 IPASATVEEAARRMREEGISS-LLVEASPL--GILTDRDLRNRVLAEG-RPPTTPVAEVM 204
Query: 124 TRNPIF-VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
T P+F + ++ EAL MV+ HLP+ E +V+ ++ T L +
Sbjct: 205 T-APLFTLPVETPIYEALAAMVERGIHHLPLTEGEKVVGVVTHTDILLN 252
>gi|367474661|ref|ZP_09474156.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273035|emb|CCD86624.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 125
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A R+M RV +VL+ D AL+ GI+T D +V+ GL +T V+++MT NP+
Sbjct: 1 MVVEALRQMRDNRVRSVLVVDDGALV-GIITQGDCAIKVLLPGLDAKETPVAQVMTANPV 59
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V D + M Q FRHLPV+ +V+ ++ I + + I +E +
Sbjct: 60 TVRPDHGLDSCMAMMSQRGFRHLPVLNADKVVGVISIGDVVKNIIRDLEHNVDD 113
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+ K + + + +P VSDA + +A +R+ +VL+ D + +GI++++DI + AEG
Sbjct: 6 ILKTKGADVVAVPPSLPVSDAAKLLAEKRIGSVLVMDREKI-AGILSERDIVRTLAAEGA 64
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV---IAILDITKCL 169
VS++MT + D + ++ M G+FRH+PVV +G + I+I D+ K
Sbjct: 65 ACLDGPVSRLMTAKVVTCRPDQSISDVMELMTSGRFRHVPVVADGRLAGMISIGDVVKW- 123
Query: 170 YDAISRMEKAAEQGSAIAAAVEG 192
R+E+A E+ +AA V G
Sbjct: 124 -----RLEEAQEEVRQMAAYVSG 141
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQN 279
T+ A V V PS PV+ AAK + E R S L++ KI GIL+ +D++ + A+
Sbjct: 9 TKGADVVAVPPSLPVSDAAKLLAEKRIGSVLVMDREKIAGILSERDIVRTLAAEG 63
>gi|410461678|ref|ZP_11315325.1| hypothetical protein BAZO_20438 [Bacillus azotoformans LMG 9581]
gi|409925614|gb|EKN62823.1| hypothetical protein BAZO_20438 [Bacillus azotoformans LMG 9581]
Length = 640
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 32 KPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDAN 91
K + GES V R V+ L +TI E +A R+M + +VL+ D
Sbjct: 158 KLAADWGESEPFV------RRVQDLMTEPVITISENETAQEAARKMVEHAIGSVLVVDEA 211
Query: 92 ALLSGIVTDKDITTRVIAEGLRPD--QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFR 149
L G++TDKDI RV A L Q IMT NP+ ++ ++ EAL +
Sbjct: 212 ERLLGVITDKDIVRRV-ATQLENHSLQFQAKDIMTPNPLTISRNAYYYEALSAFYTNGVK 270
Query: 150 HLPVVENGEVIAILDITKCL 169
HLPV+E V+ I+ ++ L
Sbjct: 271 HLPVIEEERVVGIVTLSSLL 290
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T+ + + +A+RR+ A++LT+ N ++GIV+++D+ + G+ V ++MT
Sbjct: 19 PEATL-EETMQVLANRRIGAIVLTNENGGVAGIVSERDVVRVLGTAGVGAISQSVGEVMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK-AAEQG 183
T + +A++ M G+FRHLPV EN ++ I+ I + I +E+ A E
Sbjct: 78 SQVSTCTEATTVNQAMEMMTTGRFRHLPVCENDRLVGIISIGDVVKQRIEEVEREAMEMR 137
Query: 184 SAIAAA 189
IAA
Sbjct: 138 EYIAAG 143
>gi|399543248|ref|YP_006556556.1| hypothetical protein MRBBS_0205 [Marinobacter sp. BSs20148]
gi|399158580|gb|AFP29143.1| hypothetical protein MRBBS_0205 [Marinobacter sp. BSs20148]
Length = 685
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA---NALLSGIVTDKDITTRVIA 109
V +L K ++ P + +A R M V A+LL + A L GI+TD+D+ R +
Sbjct: 212 VSRLISRKTVSAPYTVRLQEAARIMTENSVSALLLMEGEGDQARLKGIITDRDLRIRALT 271
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDIT 166
E L P +T +S IMT I + + EA+ M+ HLPV+++ E VIA+ DI
Sbjct: 272 EAL-PSETPISDIMTEGLITIPASHYIFEAMLTMLHNNVHHLPVMDDHEVRGVIALSDIV 330
Query: 167 K 167
K
Sbjct: 331 K 331
>gi|284043366|ref|YP_003393706.1| signal transduction protein with CBS domains [Conexibacter woesei
DSM 14684]
gi|283947587|gb|ADB50331.1| putative signal transduction protein with CBS domains [Conexibacter
woesei DSM 14684]
Length = 139
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ +L + G + +A M +R + + ++ D + G++T++D+ I GL PD+ +
Sbjct: 9 ATSLVVGPGHTLREAAELMHTRSIGSAIVLDQDQPGPGLLTERDVLA-AIGRGLDPDREM 67
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD--AI 173
V+ +T + +F D +A +MV+G FRHL VVE GE++ +L D+ +C + A+
Sbjct: 68 VADHLTSDLVFAAPDWSLEQAACEMVRGGFRHLIVVEGGELVGVLSMRDVVRCWTEDGAV 127
Query: 174 SRMEKAAEQGSAIAA 188
A GS +AA
Sbjct: 128 C----AVPMGSGVAA 138
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
T+ + V DA M + + AV++ + N GI+T++DI +V+A+ L+P + +V
Sbjct: 17 VYTVSKKDTVYDAANIMCEKDIGAVVVVE-NKKPVGILTERDILKKVVAKNLKPKEVLVE 75
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
++MT+N I + ++ EA + M + + LPVVEN EV+ I+
Sbjct: 76 EVMTKNIITIPKNTTLTEAAKIMSKHNVKRLPVVENNEVVGII 118
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVER 289
V VS D V AA M E + ++V K GILT +D+L +VVA+NL P+ LVE
Sbjct: 17 VYTVSKKDTVYDAANIMCEKDIGAVVVVENKKPVGILTERDILKKVVAKNLKPKEVLVEE 76
Query: 290 FIMR 293
+ +
Sbjct: 77 VMTK 80
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V +A + MA RV A+L+ L+ G+++++D +VI +G QT VS IMT
Sbjct: 20 PE-TPVLEAIKHMAEHRVGALLVMHGEKLV-GVMSERDYARKVILQGRSSSQTAVSDIMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDA 172
P+ V D+ + ++ + RHLPVVE V+ ++ D+ K + DA
Sbjct: 78 GTPLTVGPDTDVFDCMRLCTDSRIRHLPVVEGDTVVGVISIGDLVKAVIDA 128
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLV 287
V+P PV A K M E R + L++ G K+ G+++ +D +V+ Q S T V
Sbjct: 18 VAPETPVLEAIKHMAEHRVGALLVMHGEKLVGVMSERDYARKVILQGRSSSQTAV 72
>gi|444425483|ref|ZP_21220922.1| hypothetical protein B878_06053 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241214|gb|ELU52741.1| hypothetical protein B878_06053 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 629
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L +A TI + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTREAPTIERDQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRP-DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
TRV+AEGL P D+ VS +MT I + ++ EA+ M++ HLPVV+ I I
Sbjct: 212 CTRVLAEGLSPLDE--VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKEQMPIGI 269
Query: 163 LDIT 166
++ T
Sbjct: 270 IEAT 273
>gi|392380710|ref|YP_005029906.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
gi|356875674|emb|CCC96422.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
Length = 142
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ + E T V + MA + + AVL+ + L+ GIVT++D+ +V++ + +T VS
Sbjct: 16 ILVTEDTSVLTVSKLMAEKNIGAVLVVNHGDLV-GIVTERDLNNKVLSTQIDAFETEVSA 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAI 173
IMTRNP + D+ AIEAL M +RHLP+ + +++I D+ K Y+ +
Sbjct: 75 IMTRNPDTLPPDADAIEALTLMQSKHYRHLPITQGKRAVGIVSIRDLFKLAYEHL 129
>gi|225174496|ref|ZP_03728495.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
gi|225170281|gb|EEG79076.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
Length = 645
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 38 GESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGI 97
G SS V + V L + +T G ++D R M SR V ++++TD + GI
Sbjct: 157 GASSGYVIDQPMHKRVADLMSAPVITCLSGNEITDLARTMTSRNVSSIIVTDQDEKPIGI 216
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
+T+KD+ +V+A G IM+ N + V SD+ EAL MV+ +HL V
Sbjct: 217 ITEKDLVKKVVAAGCFVKSLKAEDIMSENLLTVKSDAFYYEALLTMVEHSIKHLVVTAKD 276
Query: 158 EVIAILDI 165
+ I ++ I
Sbjct: 277 KAIGMITI 284
>gi|260434018|ref|ZP_05787989.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417846|gb|EEX11105.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Silicibacter lacuscaerulensis ITI-1157]
Length = 607
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N ++P P+ +S ++ V+ L K T T V DA R M R + +V +T
Sbjct: 127 NRARPARPEQQSLATT-------RVETLMARKPATCTPDTTVQDAARLMRDRGISSVCIT 179
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
AL GI T +D++++V+A L P T VS+IM+ +P+ ++ + + L M++
Sbjct: 180 QRGAL-RGIATVRDLSSKVVAGAL-PPTTPVSQIMSPDPLTLSPSDIGSDVLHAMLERGI 237
Query: 149 RHLPVVENGEVIAIL---DITKCLYDAISRME---KAAEQGSAIAAA 189
H+P+ E G ++ I+ D+T+ + A+S E + A+ GSA A
Sbjct: 238 GHIPITEGGRLVGIVTQTDLTR--FQAVSSAELVSRIAQAGSATEMA 282
>gi|119468876|ref|ZP_01611901.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
gi|119447528|gb|EAW28795.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
Length = 612
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++ +A L G+VTD+D
Sbjct: 141 SKNDSWSERRISELMTRTAITLSPDASIRQSAKKMKEHGVSSIMVI-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+ RV+A+ + P Q VS IMT NP F+ ++ AL M++ HLPV++
Sbjct: 200 LRNRVLADEVDP-QEAVSSIMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 138 EALQKMVQGKFRHLPVVENGEVIA----------ILDITKCLYDAISRMEKAAEQGSAIA 187
E + ++ QG + P + GE I + + + +D + R K EQ A
Sbjct: 70 EVVARLAQGDYFGFPSLLTGEAIQNKLAVQKEGIVYMLNQEHFDFLRREYKPFEQYFVRA 129
Query: 188 AAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMR 247
A R S++ + ++ ER +S ++T A +SP + +AKKM+
Sbjct: 130 HA----NRLLSSHYKSKN---DSWSER----RISELMTRTA--ITLSPDASIRQSAKKMK 176
Query: 248 EFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
E +S +++ + + G++T +D+ RV+A + P+
Sbjct: 177 EHGVSSIMVIQHAHLVGVVTDRDLRNRVLADEVDPQ 212
>gi|365880312|ref|ZP_09419688.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365291678|emb|CCD92219.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 125
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A ++M RV +VL+ D + +L GIVT D +V+ GL +T VS++MT NP+
Sbjct: 1 MVVEALQKMRDSRVRSVLVID-DGVLVGIVTQGDCAIKVLLPGLDAKETPVSQVMTANPV 59
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V D + M Q FRHLPV++ +V+ ++ I + + I +E +
Sbjct: 60 TVRPDHRLDSCMAMMSQRGFRHLPVLDADKVVGVISIGDVVKNIIRDLEHNVDD 113
>gi|163800688|ref|ZP_02194588.1| hypothetical protein 1103602000593_AND4_00458 [Vibrio sp. AND4]
gi|159175037|gb|EDP59834.1| hypothetical protein AND4_00458 [Vibrio sp. AND4]
Length = 629
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L A TI + +A + MA V ++L+ + + +L GI+TD+D+
Sbjct: 152 VKTLLTRDAATIGRDQSIQEAAQLMAQDNVSSLLIVEPDFVLDEDDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL P Q VS +MT I + ++ EA+ M++ HLPVV++ I ++
Sbjct: 212 CTRVLAEGLSP-QDEVSTVMTTEVISLDHNAYVYEAMLTMLRSNVHHLPVVKDQMPIGVI 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|52079398|ref|YP_078189.1| ABC transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646821|ref|ZP_08001050.1| YhcV protein [Bacillus sp. BT1B_CT2]
gi|404488260|ref|YP_006712366.1| CBS domain-containing protein YhcV [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423681359|ref|ZP_17656198.1| ABC transporter [Bacillus licheniformis WX-02]
gi|52002609|gb|AAU22551.1| ABC transporter YhcV [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347260|gb|AAU39894.1| CBS domain protein YhcV [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391409|gb|EFV72207.1| YhcV protein [Bacillus sp. BT1B_CT2]
gi|383438133|gb|EID45908.1| ABC transporter [Bacillus licheniformis WX-02]
Length = 141
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI V +A M+ V A+ + D +L G++TD+DIT R AEG + QT VS +
Sbjct: 14 TISSNQTVQEAAELMSRHNVGAIPVVD-QGVLKGMITDRDITLRTTAEG-QDGQTPVSNV 71
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
MT N + + EA Q M Q + R LP+VEN ++ IL + + +S
Sbjct: 72 MTTNVVSGNPNMSLEEASQLMAQSQIRRLPIVENNHLVGILALGDLAVNELSN 124
>gi|145591545|ref|YP_001153547.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
gi|379003844|ref|YP_005259516.1| putative signal transduction protein [Pyrobaculum oguniense TE7]
gi|145283313|gb|ABP50895.1| putative signal-transduction protein with CBS domains [Pyrobaculum
arsenaticum DSM 13514]
gi|375159297|gb|AFA38909.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pyrobaculum oguniense TE7]
Length = 139
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ D +M +V + ++ D GI+T++D+ VIA GL PD T +MT NPI
Sbjct: 30 IKDIAAKMYENKVGSAVIVDDEGKAIGIITERDLVY-VIARGLSPD-TPAWMVMTENPIV 87
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
+ D+L +EA++KM + RHLPVV+ G+V+ ++
Sbjct: 88 IDQDALVVEAMEKMRELNIRHLPVVDKAGKVVGVV 122
>gi|260433864|ref|ZP_05787835.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417692|gb|EEX10951.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 145
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLT-DANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
+T+ T VSDA + +A +R+ V+++ D GI++++DI + A G VS
Sbjct: 16 VTVAPSTTVSDAAKILAEKRIGTVVVSEDGGKTAMGILSERDIVRELAASGSGCLTEPVS 75
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEK 178
MT + T + L +M +G+FRH+PVVE+G+++ I+ + + +S MEK
Sbjct: 76 AYMTEKLVTATKQDKVQDVLARMTEGRFRHMPVVEDGQLVGIVTLGDAVKAQLSELAMEK 135
Query: 179 AAEQG 183
A QG
Sbjct: 136 DALQG 140
>gi|218709245|ref|YP_002416866.1| hypothetical protein VS_1252 [Vibrio splendidus LGP32]
gi|218322264|emb|CAV18389.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 620
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ E TI S A + R AV+ + G++TD+D+T RVIA G+ D +++S
Sbjct: 167 AIVKSEQTIQSVAVEMLHQRSPCAVIYEGET--IVGLITDRDMTKRVIAHGVSTD-SLIS 223
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT +P+ V D L + A M+Q R+LPVV+ +V+ +L + + + AI +
Sbjct: 224 EVMTHSPVTVKPDDLVLHAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLI 283
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK GS + ERQ
Sbjct: 284 EKIKYAGSVKTMSSFTPERQ 303
>gi|452966038|gb|EME71053.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 143
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A + MA+ +V AVL+ D GI T++D+T + A G + V MTRNP+
Sbjct: 25 EAVQGMAAFKVGAVLVVDEKGGTLGIFTERDVTRCLAAHGAAVLENPVGDHMTRNPLTCQ 84
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+ M FRH+PV+ENG++ I+ I + +++ R E AE
Sbjct: 85 GSDTVASVMSTMSTHHFRHMPVMENGQLKGIVSIRDLVSNSLERAEFEAE 134
>gi|359449229|ref|ZP_09238727.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
gi|358045012|dbj|GAA74976.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
Length = 612
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++ +A L G+VTD+D
Sbjct: 141 SKNDSWSERRISELMTRTAITLSPDASIRQSAKKMKEHGVSSIMVI-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+ RV+A+ + P Q VS IMT NP F+ ++ AL M++ HLPV++
Sbjct: 200 LRNRVLADEVDP-QEAVSSIMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
>gi|392536762|ref|ZP_10283899.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas marina
mano4]
Length = 612
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
S + ER + +L A+T+ + + ++M V ++++ +A L G+VTD+D
Sbjct: 141 SKNDSWSERRISELMTRTAITLSPDASIRQSAKKMKEHGVSSIMVI-QHAHLVGVVTDRD 199
Query: 103 ITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+ RV+A+ + P Q VS IMT NP F+ ++ AL M++ HLPV++
Sbjct: 200 LRNRVLADEVDP-QEAVSSIMTTNPKFIFENNRVFSALHLMLKYNIHHLPVLD 251
>gi|254459705|ref|ZP_05073121.1| CBS domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676294|gb|EDZ40781.1| CBS domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 144
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 53 VKKLRLSKA----LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
V+K+ SKA +T+ G++V DA + +A +++ V+++ + GI++++DI +
Sbjct: 3 VQKILNSKASDAVVTVKPGSLVRDAAQILAKKQIGTVVVSSSGDTADGILSERDIVRELA 62
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DI 165
A G V MT + A L +M +G+FRH+PVVE+G++I ++ D+
Sbjct: 63 AHGASCLAEKVDDYMTSKLVTCKLSDTADSVLHQMTKGRFRHMPVVEDGQLIGLITLGDV 122
Query: 166 TKCLYDAISRMEKAAEQG 183
K +S MEK A QG
Sbjct: 123 VKARLSELS-MEKDALQG 139
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T V DA R+A RR+ A+++ D + GI++++D+ + +G+ +S +MT
Sbjct: 19 PDAT-VGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
R + T D +++M +G+FRH+PVV +++ I+ I + + ME+ + Q
Sbjct: 78 RAVVTCTPDETVPVIMERMTRGRFRHVPVVSGDKLVGIISIGDVVKFRVEEMERESAQ 135
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
I E V A M + A+++ D N + GI+T++DI +V+AEG + D V
Sbjct: 15 VIKENDSVKTAAEEMKKHNLGALVVIDDNDKIVGIITERDIV-KVVAEG-KLDAKV-KDY 71
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL---DITKCLYDAI---SR 175
MTRN I VT D+ +AL+ M+ FRHLP++ ++G+VI I+ D++K + D +
Sbjct: 72 MTRNVIGVTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKAILDPHFFQFK 131
Query: 176 MEKAAEQGSAIAAAVEGVE-RQWG 198
E A +GS V G+E ++G
Sbjct: 132 KEAADVKGSGYVCPVCGMEIDEYG 155
>gi|388602252|ref|ZP_10160648.1| hypothetical protein VcamD_20458 [Vibrio campbellii DS40M4]
Length = 629
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS---------GIVTDKDI 103
VK L +A TI + +A + MA V ++L+ D + +L GI+TD+D+
Sbjct: 152 VKTLLTREAPTIERCQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDL 211
Query: 104 TTRVIAEGLRP-DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
TRV+AEGL P D+ VS +MT I + ++ EA+ M++ HLPVV+ I I
Sbjct: 212 CTRVLAEGLSPLDE--VSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVVKEQMPIGI 269
Query: 163 LDIT 166
++ T
Sbjct: 270 IEAT 273
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ + EG V +A + M +V A+++ DA ++GI +++D R++ + L T +
Sbjct: 103 IKVKEGDTVFNAIQTMQKHKVGALVVVDAENRMTGIFSERDYMNRIVVKDLSSRTTYIKD 162
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
+M+ + + V +D+ + + M++ FRHLPVVE +++ IL I + IS
Sbjct: 163 VMSPHVVTVRTDTSTAKCMSIMIKRGFRHLPVVEGEKLVGILSIGDLVKHIIS 215
>gi|403236526|ref|ZP_10915112.1| hypothetical protein B1040_12224 [Bacillus sp. 10403023]
Length = 626
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V+ + + + + T+ S ++M R +VL+ LL GI+T++D+ +RVI E
Sbjct: 164 RRVQDIMTTSLIKVEPDTLCSVVAQQMTEHRTSSVLVVKNEKLL-GIITERDLVSRVIYE 222
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
+ +T S+ MT+NPI ++ + EAL + +HLPV E EV+ I+ ++ +
Sbjct: 223 R-KNGKTNASEFMTKNPITISKYAYCYEALSTFILQGVKHLPVTEEEEVVGIITLSDVMR 281
Query: 171 DAISRM 176
+ M
Sbjct: 282 QNVDSM 287
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
V P +V A++M E R++S L+V K+ GI+T +D++ RV+ +
Sbjct: 177 VEPDTLCSVVAQQMTEHRTSSVLVVKNEKLLGIITERDLVSRVIYE 222
>gi|424037992|ref|ZP_17776665.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
gi|408894900|gb|EKM31460.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
Length = 620
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + G++TD+D+T RVIA+G+ D + +S++MT +P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGVSTD-SPISEVMTHDPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 151 LPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
LP+VE+ +V+ +L T + + AI +EK GS + + ERQ
Sbjct: 254 LPLVESNKVVGVLTTTHLVQNHRVQAIFLIEKIKYAGSVKSLSSFTPERQ 303
>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
Length = 145
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTD-ANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
LT+ V+DA R M+ +R+ AV+++D A +GI++++DI + +G VVS
Sbjct: 16 LTLTSDANVADAARIMSEKRIGAVVISDDGGATPAGILSERDIVRELGKQGPSCMALVVS 75
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAI-SRMEKA 179
+MT+ + + L KM QG+FRH+PV++ G+++ ++ I DA+ +R+ +
Sbjct: 76 DMMTKKLVTCSPSDTTDSVLVKMTQGRFRHMPVMDGGKMVGLISIG----DAVKARLSEL 131
Query: 180 AEQGSAIAAAVEG 192
A + A+ V G
Sbjct: 132 AAERDALTGMVMG 144
>gi|86742311|ref|YP_482711.1| signal-transduction protein [Frankia sp. CcI3]
gi|86569173|gb|ABD12982.1| putative signal-transduction protein with CBS domains [Frankia sp.
CcI3]
Length = 122
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S L I G + A R MA+R+V A ++ DA++ GI+T++D+ R IA PD +
Sbjct: 3 SLVLMIGPGHTLRQAARLMAARKVGAAVVHDADSEGYGILTERDVL-RSIAAAQDPDVEI 61
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
+TR+ +F + EA M++G FRHL V G V IL D+ +C
Sbjct: 62 AGDHLTRDVVFADPEWSLDEAAAAMLRGGFRHLIVTSGGGVAGILSMRDVVRCW 115
>gi|149190814|ref|ZP_01869079.1| hypothetical protein VSAK1_07264 [Vibrio shilonii AK1]
gi|148835376|gb|EDL52348.1| hypothetical protein VSAK1_07264 [Vibrio shilonii AK1]
Length = 629
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
V+ L A TI + + +A R MA +V ++L+ D + + GI+TD+D+
Sbjct: 152 VRTLLTRDAPTIERSSTIQNAARLMADEQVSSLLIIDPEIVDNDEEDTSPVLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AE L P Q V +M+ + I + ++ EA+ M++ HLPV++N + I I+
Sbjct: 212 CTRVLAESLDP-QDEVGSVMSTDVISLDHNAYVYEAMLTMLRYNVHHLPVLKNKQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|86145827|ref|ZP_01064155.1| hypothetical protein MED222_13545 [Vibrio sp. MED222]
gi|85836282|gb|EAQ54412.1| hypothetical protein MED222_13545 [Vibrio sp. MED222]
Length = 622
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ E TI S A + R AV+ + G++TD+D+T RVIA G+ D +++S
Sbjct: 169 AIVKSEQTIQSVAVEMLHQRSPCAVIYEGET--IVGLITDRDMTKRVIAHGVSTD-SLIS 225
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT +P+ V D L + A M+Q R+LPVV+ +V+ +L + + + AI +
Sbjct: 226 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLI 285
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK GS + ERQ
Sbjct: 286 EKIKYAGSVKTMSSFTPERQ 305
>gi|347523925|ref|YP_004781495.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460807|gb|AEM39243.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 143
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
Query: 56 LRLSKALTIPEGTI-----VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV--- 107
LR+S ++ P T+ + +A R+M R+ +VL+ D L GIVT++DI V
Sbjct: 10 LRVSDLMSTPPVTVHRDVSIEEAARKMYENRIGSVLVVDEEGKLVGIVTERDILYAVVKG 69
Query: 108 -IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
+ GL V IMT NPI D IEA+++M + RHLPVV E G+ + +L
Sbjct: 70 KVGRGLP-----VWDIMTDNPITAKPDEPLIEAIERMREANVRHLPVVDEEGKPVGML 122
>gi|430005121|emb|CCF20922.1| Cyclic nucleotide-binding protein [Rhizobium sp.]
Length = 608
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R V +L + LT V A M RV ++ + D + L+ G+VT +D+T+RV+A+
Sbjct: 142 RKVGELMSAPPLTCSPEDSVRHAAEIMRDGRVSSLGVVDGDRLV-GLVTTRDLTSRVLAQ 200
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
GL P T V IMT P+ ++ L + L M++ + HLP+V G + ++ D+T+
Sbjct: 201 GLDPIHTRVGAIMTAEPLTLSESHLGSDVLNLMLEKRIGHLPIVSGGRLTGMITQTDLTR 260
Query: 168 --CLYDAISRMEKAAEQGSAIAAAV 190
L AI E A+ +G A AV
Sbjct: 261 FQALSSAILIREIASAEGVAELRAV 285
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
SP D V AA+ MR+ R +S +V G ++ G++T++D+ RV+AQ L P
Sbjct: 155 CSPEDSVRHAAEIMRDGRVSSLGVVDGDRLVGLVTTRDLTSRVLAQGLDP 204
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 66 EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
+ T+VS A R MA+R + AVL+TD N L+GI +++D +V+ +G T V IMT
Sbjct: 21 DNTVVS-ALRVMANRGIGAVLVTD-NGALAGIFSERDYARKVVLQGKDSSSTPVRDIMTS 78
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQ 182
I VT D +A+Q M + RHLPV++ G +I ++ I + + I + +Q
Sbjct: 79 KLIHVTPDMTVDQAMQLMSDKRIRHLPVLDGAGSLIGVVSIGDLVKETIEYQQYLIKQ 136
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ T+ V +A +MA + V A+ + D L+ GI++++D +VI GL +T
Sbjct: 16 QEVYTVRNDHTVFEALIKMAEKNVGALPVVDERGLVVGIISERDYARKVILHGLSSVKTK 75
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
V +IM I V S + M RHLPVVENG++I +L I + +AI
Sbjct: 76 VCEIMNAPVITVDSHQKVETCMAIMTDRHLRHLPVVENGQLIGLLSIGDLVKEAI----- 130
Query: 179 AAEQGSAI 186
AEQ S I
Sbjct: 131 -AEQASLI 137
>gi|212640156|ref|YP_002316676.1| hypothetical protein Aflv_2334 [Anoxybacillus flavithermus WK1]
gi|212561636|gb|ACJ34691.1| FOG: CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 154
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
TV+ + + T+ V +A + M V A+ + + N + G++TD+DIT R A+
Sbjct: 16 HTVESIMTRQVATVTPDQSVQEAAQLMNEHNVGAIPVVE-NGKVKGMITDRDITLRTTAQ 74
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDI-T 166
GL P T VS++MT N + T + EA + M + + R LP+V+N E ++A+ DI T
Sbjct: 75 GLTPS-TPVSQVMTSNVVTGTPNMSVNEAAEVMAKNQIRRLPIVQNNELCGIVALGDIAT 133
Query: 167 KCLYDAISRMEKAAEQG 183
YD +AAEQ
Sbjct: 134 NQAYD------EAAEQA 144
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 215 MFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMR 274
+ ++ +I+T +VA V+P V AA+ M E + +V K++G++T +D+ +R
Sbjct: 13 ILNHTVESIMTR--QVATVTPDQSVQEAAQLMNEHNVGAIPVVENGKVKGMITDRDITLR 70
Query: 275 VVAQNLSP 282
AQ L+P
Sbjct: 71 TTAQGLTP 78
>gi|424032987|ref|ZP_17772403.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408875066|gb|EKM14220.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
Length = 620
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + G++TD+D+T RVIA+G+ D + +S++MT P + D L + A M+Q R+
Sbjct: 195 NDKIVGLITDRDMTKRVIAQGISTD-SPISEVMTHEPQTIKPDDLVLHAASMMMQHNIRN 253
Query: 151 LPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
LP+VE+ +V+ +L T + + AI +EK GS + + ERQ
Sbjct: 254 LPLVESNKVVGVLTTTHLVQNHRVQAIFLIEKIKYAGSVKSLSSFTPERQ 303
>gi|77464146|ref|YP_353650.1| signal transduction protein [Rhodobacter sphaeroides 2.4.1]
gi|332559022|ref|ZP_08413344.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
gi|77388564|gb|ABA79749.1| Predicted signal transduction protein containing cyclic
nucleotide-binding and CBS domains [Rhodobacter
sphaeroides 2.4.1]
gi|332276734|gb|EGJ22049.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
Length = 606
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L K +T + A +M V ++ + + +A L GIVT +D+T +V+A GL
Sbjct: 143 VADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFL-GIVTTRDMTNKVVATGL 201
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T V+++MTR+PI + ++L + L M++ + HLPVVE G ++ ++ D+T+
Sbjct: 202 DP-STPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVEEGRLVGMITQTDLTR-- 258
Query: 170 YDAIS 174
+ A+S
Sbjct: 259 FQAVS 263
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
K P++ + AA KMR+ +S +V GS GI+T++D+ +VVA L P + E
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDPSTPVAE 209
>gi|84386995|ref|ZP_00990018.1| hypothetical protein V12B01_24299 [Vibrio splendidus 12B01]
gi|84378070|gb|EAP94930.1| hypothetical protein V12B01_24299 [Vibrio splendidus 12B01]
Length = 620
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ E TI S A + R AV+ + G++TD+D+T RVIA G+ D +++S
Sbjct: 167 AIVKSEQTIQSVAVEMLHQRSPCAVIYEGET--IVGLITDRDMTKRVIAHGVSTD-SLIS 223
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT +P+ V D L + A M+Q R+LPVV+ +V+ +L + + + AI +
Sbjct: 224 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLI 283
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK GS + ERQ
Sbjct: 284 EKIKYAGSVKTMSSFTPERQ 303
>gi|365891070|ref|ZP_09429537.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333005|emb|CCE02068.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 125
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A ++M RV +VL+ D + +L GIVT D +V+ GL QT V+++MT NP+
Sbjct: 1 MVVEALQKMRDNRVRSVLVMD-DGVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPV 59
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V D + M + FRHLPV++ +V+ ++ I + + I +E +
Sbjct: 60 TVKPDHPLDGCMAMMSRRGFRHLPVLDGTKVVGVISIGDVVKNIIRDLEHNVDD 113
>gi|374327038|ref|YP_005085238.1| putative signal-transduction protein with CBS domains [Pyrobaculum
sp. 1860]
gi|356642307|gb|AET32986.1| putative signal-transduction protein with CBS domains [Pyrobaculum
sp. 1860]
Length = 123
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+ +T E V D +M ++ +V++ D GIVT++DI V+A L PD T
Sbjct: 2 VKNVVTAKENDKVRDIAIKMYENKIGSVVIVDDEGKPIGIVTERDIV-YVLARALSPD-T 59
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
IMT NPI + D+L +EA++KM + RHLPVV++
Sbjct: 60 PAWMIMTENPIVIKEDALVVEAMEKMRELNIRHLPVVDH 98
>gi|126462989|ref|YP_001044103.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104653|gb|ABN77331.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
17029]
Length = 606
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L K +T + A +M V ++ + + +A L GIVT +D+T +V+A GL
Sbjct: 143 VADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFL-GIVTTRDMTNKVVATGL 201
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T V+++MTR+PI + ++L + L M++ + HLPVVE G ++ ++ D+T+
Sbjct: 202 DP-STPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVEEGRLVGMITQTDLTR-- 258
Query: 170 YDAIS 174
+ A+S
Sbjct: 259 FQAVS 263
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
K P++ + AA KMR+ +S +V GS GI+T++D+ +VVA L P + E
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDPSTPVAE 209
>gi|261210980|ref|ZP_05925270.1| Signal transduction protein [Vibrio sp. RC341]
gi|260839955|gb|EEX66555.1| Signal transduction protein [Vibrio sp. RC341]
Length = 629
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA V A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTHPAPTIDKNASIQQAALRMADENVSALLILDNQILQDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V +K+MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-TKVMTYEVISLDHNAYVYEAMLTMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|218295637|ref|ZP_03496433.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
gi|218243796|gb|EED10323.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
Length = 580
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ I G V++A RRMA V + LL + L GI+TD+D+ RV+A+ RP T V +
Sbjct: 147 IYIAPGATVAEAARRMAQEGVSS-LLVEGEPL--GILTDRDLRNRVLAQE-RPSSTPVGE 202
Query: 122 IMTRNPIF-VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ TR P+F + +D+ EAL MV+ HLP++E +V+ ++ T +
Sbjct: 203 VATR-PLFALPADTPLYEALAAMVERGIHHLPLLEGAKVVGVVTHTDLV 250
>gi|429206302|ref|ZP_19197570.1| putative signal-transduction protein [Rhodobacter sp. AKP1]
gi|428191023|gb|EKX59567.1| putative signal-transduction protein [Rhodobacter sp. AKP1]
Length = 606
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L K +T + A +M V ++ + + +A L GIVT +D+T +V+A GL
Sbjct: 143 VADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFL-GIVTTRDMTNKVVATGL 201
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T V+++MTR+PI + ++L + L M++ + HLPVVE G ++ ++ D+T+
Sbjct: 202 DP-STPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVEEGRLVGMITQTDLTR-- 258
Query: 170 YDAIS 174
+ A+S
Sbjct: 259 FQAVS 263
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
K P++ + AA KMR+ +S +V GS GI+T++D+ +VVA L P + E
Sbjct: 150 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDPSTPVAE 209
>gi|225850392|ref|YP_002730626.1| nucleotidyltransferase family [Persephonella marina EX-H1]
gi|225645372|gb|ACO03558.1| putative nucleotidyltransferase family [Persephonella marina EX-H1]
Length = 601
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T+K + L A+ E V+ ++M+S L+ +++ GI+TDKD+ RV+A+G
Sbjct: 142 TLKSIDLRPAVFCDEEDSVTQVAKKMSSADTSCCLVGREDSI-KGIITDKDLKDRVLAKG 200
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
P + S I T F+ SD EA+ KM++ + LPV+E G+VI +++
Sbjct: 201 HDPSKIKASDIKTYPVEFIESDRFLFEAVLKMIRKNIKRLPVLEEGKVIGVVE 253
>gi|221640014|ref|YP_002526276.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
gi|221160795|gb|ACM01775.1| Cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
Length = 611
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L K +T + A +M V ++ + + +A L GIVT +D+T +V+A GL
Sbjct: 148 VADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFL-GIVTTRDMTNKVVATGL 206
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
P T V+++MTR+PI + ++L + L M++ + HLPVVE G ++ ++ D+T+
Sbjct: 207 DP-STPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVEEGRLVGMITQTDLTR-- 263
Query: 170 YDAIS 174
+ A+S
Sbjct: 264 FQAVS 268
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
K P++ + AA KMR+ +S +V GS GI+T++D+ +VVA L P + E
Sbjct: 155 KPVTCGPAETIRAAAMKMRDAGVSSLGVVEGSAFLGIVTTRDMTNKVVATGLDPSTPVAE 214
>gi|392946580|ref|ZP_10312222.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Frankia sp. QA3]
gi|392289874|gb|EIV95898.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Frankia sp. QA3]
Length = 128
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S L I G + A R MA+R+V A ++ DA++ GI+T++DI + AE PD +
Sbjct: 9 SLVLMIGPGHTLRQAARLMAARKVGAAVVHDADSQGYGILTERDILRSIAAE-QDPDVEI 67
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
+TR+ +F EA M++G FRHL V G V IL D+ +C
Sbjct: 68 AGDHLTRDVVFADPGWSLDEAAASMLRGGFRHLIVTSGGGVAGILSMRDVVRCW 121
>gi|254504825|ref|ZP_05116976.1| Putative nucleotidyltransferase DUF294 family [Labrenzia alexandrii
DFL-11]
gi|222440896|gb|EEE47575.1| Putative nucleotidyltransferase DUF294 family [Labrenzia alexandrii
DFL-11]
Length = 609
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K +T V A RM V ++ + +++ L GIVT +D++ +++AEG RP +T V
Sbjct: 151 KPITCAADDTVQLAAIRMRENHVSSLCVVNSDDALIGIVTIRDLSGKILAEG-RPIETPV 209
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRM 176
+MT NP+ + S+ + L M++ + H+P+V+ G++ I+ D+T+ + A+S
Sbjct: 210 DAVMTANPVTLAPSSIGSDVLHLMMERRIGHVPIVKGGKLAGIVTQTDLTR--FQAVSSA 267
Query: 177 EKAAEQGSAIAA 188
E E SA A
Sbjct: 268 ELVGEITSAATA 279
>gi|259418936|ref|ZP_05742853.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345158|gb|EEW57012.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 144
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 53 VKKLRLSKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+K +S+ +TI P+ T+ + A + ++ + V+++ N+ GI++++DI ++ G
Sbjct: 7 LKSKEISEVVTIRPDATMEA-AAQLLSEHGIGTVVVSADNSTPLGILSERDIVRKLAKVG 65
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
V MTR+ + T DS+A EAL M +G+FRH+PVVE+G ++ I+ D+ K
Sbjct: 66 SVCLGHKVEDYMTRDVVTCTQDSVAEEALATMTEGRFRHMPVVEDGALVGIISLGDVVKA 125
Query: 169 LYDAISRMEKAAEQG 183
+ ++ MEK A +G
Sbjct: 126 QLNEVA-MEKTALEG 139
>gi|153006663|ref|YP_001380988.1| hypothetical protein Anae109_3825 [Anaeromyxobacter sp. Fw109-5]
gi|152030236|gb|ABS28004.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
Length = 598
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 16/144 (11%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL- 87
+L+ P+ G+ S+ V +L + A+ + V+ A R M R+ +VL+
Sbjct: 134 SLAHAPAFSGQPDLSI-------EVGRLVVRPAVWVERDATVAHAARVMREHRISSVLVR 186
Query: 88 TDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
TD GIVTD+D RV+A+GL P T V+++ TR V S++ A ++ +
Sbjct: 187 TDP----PGIVTDRDFRNRVLADGL-PPATPVTEVFTRPLQLVPSEAPLHAAWTALLDAR 241
Query: 148 FRHLPVVENGEVIAIL---DITKC 168
HLPVV +GE+ ++ D+ +C
Sbjct: 242 IHHLPVVTDGEIAGVITSGDLLRC 265
>gi|56460527|ref|YP_155808.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
gi|56179537|gb|AAV82259.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
Length = 617
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLS-GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+ DA +M +V ++L+ D L GI+TDKD+ RV+A R VS IMT N
Sbjct: 169 IHDAAAKMTDEKVSSLLIIDETQHLPVGIITDKDLRKRVLAVN-RSSTHPVSSIMTENLT 227
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
FV ++ EAL M++ HLPV++ G+V+ ++ ++
Sbjct: 228 FVQHNNRVFEALLIMMRTNLHHLPVLKKGQVVGVIALS 265
>gi|110678448|ref|YP_681455.1| nucleotidyltransferase [Roseobacter denitrificans OCh 114]
gi|109454564|gb|ABG30769.1| nucleotidyltransferase, putative [Roseobacter denitrificans OCh
114]
Length = 608
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V L + +T GT V DA M SRR+ + +T+ + L +GIVT +D+ + +A G
Sbjct: 144 SVDALMVRNPVTCTPGTSVVDAAVLMTSRRISCLCITEEDRL-TGIVTLRDLVGKALAAG 202
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
L P QT +S I+ P+ + ++ + L M++ HLP+V+ G+++ I+ D+T+
Sbjct: 203 L-PPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGHLPIVDAGKLVGIVTQTDLTR 260
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + T+ V +A + M+ + + A+ + + N + G++TD+DIT R A+G
Sbjct: 9 VQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPVAE-NGQVKGMITDRDITLRTSAQGK 67
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P T VS++MT + T D EA M Q + R LP+VEN ++ I+ + ++
Sbjct: 68 DPASTPVSEVMTNRVVTGTPDMSVQEAANVMAQNQVRRLPIVENNQLQGIVALGDIATNS 127
Query: 173 ISRMEKAAEQ 182
S ++AAEQ
Sbjct: 128 AS--DQAAEQ 135
>gi|217972889|ref|YP_002357640.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS223]
gi|217498024|gb|ACK46217.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS223]
Length = 615
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGL-DGHIAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ + I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDIL 266
>gi|153001189|ref|YP_001366870.1| signal-transduction protein [Shewanella baltica OS185]
gi|373950008|ref|ZP_09609969.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS183]
gi|386324159|ref|YP_006020276.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica BA175]
gi|151365807|gb|ABS08807.1| putative signal-transduction protein with CBS domains [Shewanella
baltica OS185]
gi|333818304|gb|AEG10970.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica BA175]
gi|373886608|gb|EHQ15500.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS183]
Length = 615
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGL-DGHIAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ + I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDIL 266
>gi|417822704|ref|ZP_12469302.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
gi|340048834|gb|EGR09750.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HE48]
Length = 625
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P + C SR AV++ D + G+VTD+D+T V+A G+ + + S +MT
Sbjct: 176 PIQDVAQTMCSEERSRSSCAVVMRDGE--IVGVVTDRDMTRSVVATGIGIHEPI-STVMT 232
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRMEKAA 180
+NP + D I+A+ M+Q R LPVV+ EV+ +L + +++ A+ +EK
Sbjct: 233 QNPQLIQGDDKVIQAISIMLQYNIRCLPVVKGNEVVGLLTTSHLVHNHRTQALFLIEKIK 292
Query: 181 EQGSAIAAAVEGVERQ 196
S A A VE+Q
Sbjct: 293 YASSVNALAALNVEKQ 308
>gi|126459756|ref|YP_001056034.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249477|gb|ABO08568.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 138
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ D RM ++V +V++ D GI+T++D+ V A GL PD T +MT NP+
Sbjct: 30 IKDVALRMYEKKVGSVVVVDEEGKPVGIITERDMVY-VCARGLSPD-TPAWMVMTENPVT 87
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAI 173
+ ++L EA++KM Q RHLPVV++ G+++ I+ L A+
Sbjct: 88 INENALVTEAMEKMRQLDIRHLPVVDSTGKLVGIISFRDVLDTAL 132
>gi|407794461|ref|ZP_11141487.1| signal protein [Idiomarina xiamenensis 10-D-4]
gi|407212231|gb|EKE82095.1| signal protein [Idiomarina xiamenensis 10-D-4]
Length = 613
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 46 GAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITT 105
G +RTV + +A+++ T + +A + M+ V +VL+ D L+ GI+TD+DI
Sbjct: 144 GDWSDRTVASVLQHEAISLTSTTPIQEAAKLMSVEGVSSVLVVDKGQLV-GILTDRDIRN 202
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE 158
RV+A GL P + VS +MT+ P V + ++AL M Q HLPV+ + +
Sbjct: 203 RVVAAGL-PYEVAVSAVMTQAPEAVYARRSLLDALTLMTQHNVHHLPVLADDD 254
>gi|113460448|ref|YP_718510.1| signal-transduction protein [Haemophilus somnus 129PT]
gi|112822491|gb|ABI24580.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 648
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T + A RM +R + L+ N L+ GI+ D+D+T +V+A+GL + T+V++IM N
Sbjct: 195 NTTLQQAAIRMCEQRRSSALVMQQNKLI-GIIHDRDMTKKVVAQGLDVN-TLVTEIMNIN 252
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
P + D L ++A+ M+Q R LPV+ + +V IL T
Sbjct: 253 PPVIRGDELVLQAISMMMQHNIRSLPVIVDDKVQGILTAT 292
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
N K+A+V + + AA +M E R +SAL++ +K+ GI+ +D+ +VVAQ L +
Sbjct: 186 NPKIALVDTNTTLQQAAIRMCEQRRSSALVMQQNKLIGIIHDRDMTKKVVAQGLDVNTLV 245
Query: 287 VERFIMRI 294
E IM I
Sbjct: 246 TE--IMNI 251
>gi|383935285|ref|ZP_09988722.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
gi|383703701|dbj|GAB58813.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
Length = 619
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDAN----ALLSGIVTDKDITTRVIAEGLRPD 115
+ + +P V A + M V +L+ + L+GI+TD+DI +R++A GL+
Sbjct: 159 QPVCLPASATVWQAAQIMTEHGVSCLLILHDDDTEQGKLAGIITDRDIRSRLVAPGLK-S 217
Query: 116 QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+T VS IMT NP+ + + EA+ M++ HLPVV+ + +L ++
Sbjct: 218 ETCVSTIMTANPVTINAQQYLFEAMMLMLRHNVHHLPVVQQATPVGVLALS 268
>gi|170718018|ref|YP_001783527.1| hypothetical protein HSM_0174 [Haemophilus somnus 2336]
gi|168826147|gb|ACA31518.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Haemophilus somnus 2336]
Length = 626
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
T + A RM +R + L+ N L+ GI+ D+D+T +V+A+GL + T+V++IM N
Sbjct: 173 NTTLQQAAIRMCEQRRSSALVMQQNKLI-GIIHDRDMTKKVVAQGLDVN-TLVTEIMNIN 230
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
P + D L ++A+ M+Q R LPV+ + +V IL T
Sbjct: 231 PPVIRGDELVLQAISMMMQHNIRSLPVIVDDKVQGILTAT 270
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
N K+A+V + + AA +M E R +SAL++ +K+ GI+ +D+ +VVAQ L +
Sbjct: 164 NPKIALVDTNTTLQQAAIRMCEQRRSSALVMQQNKLIGIIHDRDMTKKVVAQGLDVNTLV 223
Query: 287 VERFIMRI 294
E IM I
Sbjct: 224 TE--IMNI 229
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI V DA R MA + + A+++T+ A++ GI T++D ++ G T V +
Sbjct: 18 TITPAASVLDALRLMADKSIGALIVTEGEAIV-GIFTERDYARKIALMGRTSAVTQVKDV 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT +FV D + + +Q M + RHLPV+ NG+++ ++ I + D IS + EQ
Sbjct: 77 MTSAVMFVRPDQTSEQCMQIMSNNRLRHLPVLSNGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|392426410|ref|YP_006467404.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfosporosinus acidiphilus SJ4]
gi|391356373|gb|AFM42072.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfosporosinus acidiphilus SJ4]
Length = 143
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V+DA R M V ++ + D N + G++TD+DI V+A G + T+V +IM++N
Sbjct: 18 TSVADAARLMKKDDVGSIPICD-NGKVVGMITDRDIVLNVVAAGKDYNTTLVQEIMSKNI 76
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIA 187
+ V+S+ EA M Q + R LPVV+ G+++ IL I AI R+ E G A++
Sbjct: 77 VSVSSNQDVHEAADLMSQYQIRRLPVVDQGKLVGILAIGDL---AIERIH-VNEAGDALS 132
Query: 188 AAVEGVERQ 196
G +
Sbjct: 133 DISRGAHQN 141
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A R MA V ++++ D N + GI+TD+DI + IA+GL P T +++ P +
Sbjct: 21 VAQAARVMAELGVGSLVIADENERMCGIITDRDIVVKCIAQGLSPSGTRAAELCEATPRW 80
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
+++D+ E L +M + + +PV+EN +I ++ D+ + L D
Sbjct: 81 ISADADVDEVLDEMETHQVKRMPVIENKRLIGMISEADLARHLDD 125
>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
++ +TI V+DA + ++ R++ +V+++ GI++++DI V G
Sbjct: 13 AEVVTIGPDASVADAAKVLSLRKIGSVVVSSNGKTADGILSERDIVREVGVRGAGCLTET 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISR 175
V +MTR+ + D A + L +M +G+FRH+PVV++GE+I ++ D K +S
Sbjct: 73 VGNMMTRDLVTCGPDESADKVLMQMTEGRFRHMPVVQDGEMIGLITLGDAVKARLQEVS- 131
Query: 176 MEKAAEQG 183
MEK A +G
Sbjct: 132 MEKEALEG 139
>gi|452990129|emb|CCQ98703.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 147
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSL 135
+M R V A+ + D + GI+TD+DI R AE +P T V +IMT+NPI + +
Sbjct: 27 KMKERNVGAIPIVDGKRPI-GIITDRDIVIRGTAER-KPGSTAVEEIMTKNPITIQPTAS 84
Query: 136 AIEALQKMVQGKFRHLPVVENGEVIAIL---DITK------CLYDAISRM-EKAAEQGSA 185
A EA + M + + R L VVENGE++ IL D+T +DAI+ + E AE S
Sbjct: 85 AEEASEMMAEHQIRRLIVVENGEMVGILAMKDLTDQRSTLPFAHDAIAEISETRAEHQSE 144
Query: 186 I 186
+
Sbjct: 145 L 145
>gi|330446341|ref|ZP_08309993.1| cyclic nucleotide-binding domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490532|dbj|GAA04490.1| cyclic nucleotide-binding domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 625
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 25 ENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRL---SKALTIPEGTIVSDACRRMASRR 81
E+G L S Q + + + T KLR A+ I + + A + MA+
Sbjct: 129 EDGARLRHAVSSQHDEN--------DLTTSKLRTLITRDAVIIDKNESIQTAAQTMATEG 180
Query: 82 VDAVLLTDANA--------LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSD 133
V A+LL+D A ++GI+TD+D+ TRV+AEG+ + V S +MT PI + +
Sbjct: 181 VSALLLSDNTATDDDDDNDYVAGIITDRDLCTRVLAEGISTSEAV-SSVMTAEPITLDHN 239
Query: 134 SLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+ EA+ M++ HLPV+ N + I ++ ++
Sbjct: 240 AYVFEAMLTMLRYNIHHLPVLRNKQPIGVISVS 272
>gi|59713120|ref|YP_205896.1| cyclic nucleotide binding protein/CBS domain-containing proteins
[Vibrio fischeri ES114]
gi|197336429|ref|YP_002157301.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
gi|423687247|ref|ZP_17662055.1| cyclic nucleotide binding protein [Vibrio fischeri SR5]
gi|59481221|gb|AAW87008.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio fischeri
ES114]
gi|197317919|gb|ACH67366.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
gi|371493646|gb|EHN69247.1| cyclic nucleotide binding protein [Vibrio fischeri SR5]
Length = 626
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-------GIVTDKDITT 105
VK L +A+ I + + A + MA V AVL+TD + + GI+TD+D+ T
Sbjct: 153 VKTLITREAVMIEKNQTIQSAAKTMAEENVSAVLITDPDIDIEEEDNNFVGIITDRDLCT 212
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+V+A GL +T VS++M+ I + ++ EA+ M++ HLPV+ N + I ++++
Sbjct: 213 KVLACGLDF-ETPVSEVMSTELISLDHNAYVFEAMLMMLRYNVHHLPVLRNKQPIGVIEV 271
Query: 166 T 166
+
Sbjct: 272 S 272
>gi|330505788|ref|YP_004382657.1| hypothetical protein [Pseudomonas mendocina NK-01]
gi|328920074|gb|AEB60905.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
Length = 639
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N +++GI+TD+D+ TRV+AEGL P T VS++MT P+ V +D EA+ M++ H
Sbjct: 207 NQVMAGILTDRDLRTRVLAEGL-PGDTPVSQVMTPGPVTVQADESVFEAMLCMLRNNIHH 265
Query: 151 LPVVENGEVIAILDITKCL 169
LPV++ + ++ + +
Sbjct: 266 LPVLQRRRPVGMISLADVI 284
>gi|302036722|ref|YP_003797044.1| hypothetical protein NIDE1368 [Candidatus Nitrospira defluvii]
gi|300604786|emb|CBK41118.1| protein of unknown function, contains CBS domains [Candidatus
Nitrospira defluvii]
Length = 258
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 49 GER----TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
GER TV + ++ ++ + + +A R + R+ ++L+ D + + GI+TD D++
Sbjct: 126 GERIDGHTVAEFMSAEVRSVHKKASIKEAGRLLQKWRIGSLLVDDGSRYI-GIITDTDLS 184
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
+ +A+GL P+ T V M+++ + + +EAL M + RHLPV E+G +I +L
Sbjct: 185 RKAVAKGLDPNTTTVLSCMSKSVVTIEDSEPLMEALSLMKKEGIRHLPVTEDGTIIGVLS 244
Query: 165 ITKCL 169
+ L
Sbjct: 245 VGDLL 249
>gi|418245286|ref|ZP_12871693.1| hypothetical protein KIQ_07257 [Corynebacterium glutamicum ATCC
14067]
gi|354510694|gb|EHE83616.1| hypothetical protein KIQ_07257 [Corynebacterium glutamicum ATCC
14067]
Length = 622
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ ++ T + DA +M V + LL + L GI+TD+D+ +RV+A+ L
Sbjct: 159 EFKIANPISCSPDTTIMDAAIKMDEFGVSS-LLVQIDGELKGIITDRDMRSRVVAKDLDI 217
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q VS++MT +P TS LA EA+ M + + HLP+V++G++ I+ DI + L +
Sbjct: 218 -QLPVSEVMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVDDGQISGIVTAADIMRLLRH 276
Query: 171 DAI 173
D I
Sbjct: 277 DPI 279
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
SP + AA KM EF +S L+ +++GI+T +D+ RVVA++L +L + E
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDLDIQLPVSE 223
>gi|19552508|ref|NP_600510.1| signal-transduction protein [Corynebacterium glutamicum ATCC 13032]
gi|62390174|ref|YP_225576.1| signal transduction protein [Corynebacterium glutamicum ATCC 13032]
gi|21324056|dbj|BAB98681.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Corynebacterium glutamicum ATCC 13032]
gi|41325510|emb|CAF19990.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domain [Corynebacterium glutamicum ATCC 13032]
gi|385143420|emb|CCH24459.1| predicted signal-transduction protein [Corynebacterium glutamicum
K051]
Length = 622
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ ++ T + DA +M V + LL + L GI+TD+D+ +RV+A+ L
Sbjct: 159 EFKIANPISCSPDTTIMDAAIKMDEFGVSS-LLVQIDGELKGIITDRDMRSRVVAKDLDI 217
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q VS++MT +P TS LA EA+ M + + HLP+V++G++ I+ DI + L +
Sbjct: 218 -QLPVSEVMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVDDGQISGIVTAADIMRLLRH 276
Query: 171 DAI 173
D I
Sbjct: 277 DPI 279
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
SP + AA KM EF +S L+ +++GI+T +D+ RVVA++L +L + E
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDLDIQLPVSE 223
>gi|126435086|ref|YP_001070777.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
gi|126234886|gb|ABN98286.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
Length = 607
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 26/194 (13%)
Query: 9 RSQKRAPS-TSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
RSQ +P+ + SS+ N ++PP P S G A GE ++ LT+
Sbjct: 115 RSQLASPAGLAFLASSAWNATTAARPPGP------SAGQAVGEMVAGEV-----LTVDPH 163
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A +M RV L+ + GI TD+D+ TRV+A GL P ++++M+
Sbjct: 164 TTVREAVTQMTRHRVSYALIRLPDGGF-GIFTDRDLRTRVVAAGL-PVDVEINRVMSAPA 221
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQG--- 183
VT+D A L +M++ RH+PV+ G+V+ +L+ L +A QG
Sbjct: 222 RTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDADLL-------AASARQGFLL 274
Query: 184 -SAIAAAVEGVERQ 196
AI +AV+ E Q
Sbjct: 275 RRAIGSAVDARELQ 288
>gi|452976056|gb|EME75872.1| CBS domain-containing protein YhcV [Bacillus sonorensis L12]
Length = 141
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ V +A M+ V A+ + D +L G++TD+DIT R A+G + QT VS++
Sbjct: 14 TVSSNQTVQEAAELMSQHNVGAIPVVD-QGVLKGMITDRDITLRTTAQG-QDGQTPVSEV 71
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
MT N + D EA Q M Q + R LP+VEN ++ I+ + + +S
Sbjct: 72 MTTNVVSGNPDMSLQEASQLMAQSQIRRLPIVENNHLVGIVALGDLAVNDLSN 124
>gi|149173046|ref|ZP_01851677.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
gi|148847852|gb|EDL62184.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A RM SR V +++ D + G++TD+D+ R++ + QT+VS++MTR P V
Sbjct: 23 AADRMNSRNVGTLIVLDEESHPIGMITDRDLALRIVGKARDSIQTLVSEVMTRFPDNVNE 82
Query: 133 DSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCL 169
++ AL KM G FR LPVV+N G+++ +L + L
Sbjct: 83 ETTIELALSKMRAGGFRKLPVVDNEGKLVGVLTLDDIL 120
>gi|259506333|ref|ZP_05749235.1| CBS domain protein [Corynebacterium efficiens YS-314]
gi|259166113|gb|EEW50667.1| CBS domain protein [Corynebacterium efficiens YS-314]
Length = 618
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ +++ GT + +A + M V ++L+ L+ GI TD+D+ RV+A L
Sbjct: 155 EFKINNPISVGPGTSIREAAQTMERYAVSSLLIQTDGELI-GIATDRDMRGRVVAAALDI 213
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q V S IMT NP TS LA EA+ M + + HLP+V+ G + I+ DI + L +
Sbjct: 214 TQPV-STIMTSNPRTATSQDLAFEAMLLMAELRIHHLPIVDEGRISGIVTAADIMRLLRH 272
Query: 171 DAI 173
D I
Sbjct: 273 DPI 275
>gi|384918358|ref|ZP_10018440.1| CBS domain-containing protein [Citreicella sp. 357]
gi|384467843|gb|EIE52306.1| CBS domain-containing protein [Citreicella sp. 357]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
++ +K R +T+ V++ + +A RR+ V++++ GI++++DI R+ A
Sbjct: 4 QQILKDKRSDGVVTVGLKATVAETAQLLAERRIGGVVVSEDGQTPLGILSERDIVRRLAA 63
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
EG V +MT++ + E L +M +G+FRH+PVVE+G ++ I+ I +
Sbjct: 64 EGAAVLGMAVEDLMTKDLKTCSCKDDCDEVLARMTEGRFRHMPVVEDGVMVGIITIGDVV 123
Query: 170 YDAISR--MEKAAEQG 183
I+ MEK A QG
Sbjct: 124 AAQIAELSMEKHALQG 139
>gi|254467169|ref|ZP_05080580.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206688077|gb|EDZ48559.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VSDA R +A + +V+++ GI++++DI + EG VS MTR +
Sbjct: 24 VSDAARLLAENKFGSVVVSADGVTPDGILSERDIVRELSKEGAACLDKPVSGYMTRELVT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKAAEQ 182
T+ S E L++M +G+FRH+PVVE+G+++ I+ + + +++ MEK A Q
Sbjct: 84 CTTQSNVGELLKQMTEGRFRHMPVVEDGKLVGIVTLGDAVKAQLAQVAMEKDALQ 138
>gi|108799432|ref|YP_639629.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
gi|119868545|ref|YP_938497.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
gi|108769851|gb|ABG08573.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
gi|119694634|gb|ABL91707.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
Length = 607
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 26/194 (13%)
Query: 9 RSQKRAPS-TSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEG 67
RSQ +P+ + SS+ N ++PP P S G A GE ++ LT+
Sbjct: 115 RSQLASPAGLAFLASSAWNATTAARPPGP------SAGQAVGEMVAGEV-----LTVDPH 163
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A +M RV L+ + GI TD+D+ TRV+A GL P ++++M+
Sbjct: 164 TTVREAVTQMTRHRVSYALIRLPDGGF-GIFTDRDLRTRVVAAGL-PVDVEINRVMSAPA 221
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAISRMEKAAEQG--- 183
VT+D A L +M++ RH+PV+ G+V+ +L+ L +A QG
Sbjct: 222 RTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDADLL-------AASARQGFLL 274
Query: 184 -SAIAAAVEGVERQ 196
AI +AV+ E Q
Sbjct: 275 RRAIGSAVDARELQ 288
>gi|25027940|ref|NP_737994.1| hypothetical protein CE1384 [Corynebacterium efficiens YS-314]
gi|23493223|dbj|BAC18194.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 621
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ +++ GT + +A + M V ++L+ L+ GI TD+D+ RV+A L
Sbjct: 158 EFKINNPISVGPGTSIREAAQTMERYAVSSLLIQTDGELI-GIATDRDMRGRVVAAALDI 216
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q V S IMT NP TS LA EA+ M + + HLP+V+ G + I+ DI + L +
Sbjct: 217 TQPV-STIMTSNPRTATSQDLAFEAMLLMAELRIHHLPIVDEGRISGIVTAADIMRLLRH 275
Query: 171 DAI 173
D I
Sbjct: 276 DPI 278
>gi|359146008|ref|ZP_09179656.1| CBS domain containing protein [Streptomyces sp. S4]
Length = 138
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M V A+ + A+ L GIVTD+D+ R +A G PD+T + ++ P+ VT
Sbjct: 24 AAQAMRDHNVGALPVKSADGALLGIVTDRDLVVRALAAGKTPDRTTLEDLVEDTPVAVTP 83
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
D+ + E LQ M + R + VVE+G+++ I+ D+ + L D
Sbjct: 84 DAHSTEVLQAMGNAQVRRVVVVEDGDLLGIISEADLAQHLAD 125
>gi|312884147|ref|ZP_07743859.1| hypothetical protein VIBC2010_17330 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368195|gb|EFP95735.1| hypothetical protein VIBC2010_17330 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 629
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA---------NALLSGIVTDKDI 103
V+ L ++A TI + + A +MA V ++L+ D N L GI+TD+D+
Sbjct: 152 VRTLLTNEAPTIDKTESIQTAAIKMAEENVSSLLIIDPEIAEDEEDDNNPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A+GL P Q VS +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAQGLDP-QDEVSTVMTSEVISLDHNAYVYEAMLTMLRYNAHHLPVLKDKKPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|448823422|ref|YP_007416587.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
gi|448276919|gb|AGE36343.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
Length = 620
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE--GLRPDQTVVSKIMTR 125
T + DA RM V ++L+ D + L GI+TD+D+ V AE G P VS+ MT
Sbjct: 172 TTLRDAAIRMGEFNVSSLLVID-DRELRGIITDRDMRRSVAAEISGDSP----VSEAMTA 226
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL 169
NPI + SD+L EA+ M + H+PVV++G+V+ I+ DI + +
Sbjct: 227 NPISLGSDALVFEAMLLMAERGIHHIPVVDDGKVMGIIAAADIMRLM 273
>gi|358410681|gb|AEU10067.1| hypothetical protein PDP_0321 [Photobacterium damselae subsp.
piscicida]
Length = 620
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + GI+TD+D+T RVIA+G+ D + ++++MTR+P + S L ++A+ M++ R
Sbjct: 195 NQQIIGIITDRDMTKRVIADGVSID-SPITQVMTRHPYTIGSQDLVLKAVGLMMEHNIRS 253
Query: 151 LPVVENGEVIAILD----ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
LPVV+N +V+ +L + K AI +EK + A A ERQ
Sbjct: 254 LPVVDNQQVVGLLTTSDLVRKHRVQAIFLIEKINHAQTVEALAQLTAERQ 303
>gi|269103712|ref|ZP_06156409.1| Signal transduction protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163610|gb|EEZ42106.1| Signal transduction protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 620
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N + GI+TD+D+T RVIA+G+ D + +++MTR+P + S L ++A+ M++ R
Sbjct: 195 NQQIIGIITDRDMTKRVIADGVSTDAPI-TQVMTRHPYTIGSQDLVLKAVGLMMEHNIRS 253
Query: 151 LPVVENGEVIAILD----ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
LPVV+N +V+ +L + K AI +EK + A A ERQ
Sbjct: 254 LPVVDNQQVVGLLTTSDLVRKHRVQAIFLIEKINHAQTVEALAQLTAERQ 303
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT T V DA M+ + +V++ D + G+VT++DI +V+ + L P +T++S
Sbjct: 25 LTKSPDTNVFDAVNAMSKKNYGSVVVVDTEKKVIGVVTERDIMNKVVGKELNPKETLLSS 84
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
IMT NP +E L+ M +FR LPVV++ G++ A+
Sbjct: 85 IMTENPKLARETDDMLEWLRIMSNERFRRLPVVDDQGKIKAVF 127
>gi|346992409|ref|ZP_08860481.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Ruegeria sp. TW15]
Length = 607
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T P T V DA + M R + ++ +T+ LL GI T +DI+ + +AE + P T VS I
Sbjct: 154 TCPPDTPVQDAAQIMRDRHISSLCVTEDEKLL-GIATLRDISGKFVAESM-PADTAVSAI 211
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRME 177
MT NPI ++ + + L M++ H+P+ E G ++ I+ D+T+ Y A++ E
Sbjct: 212 MTTNPITLSPTDIGSDVLHVMMERGIGHIPISEAGRLVGIVTQTDLTR--YQAVNSAE 267
>gi|160875862|ref|YP_001555178.1| hypothetical protein Sbal195_2751 [Shewanella baltica OS195]
gi|378709064|ref|YP_005273958.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS678]
gi|418023658|ref|ZP_12662642.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS625]
gi|160861384|gb|ABX49918.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS195]
gi|315268053|gb|ADT94906.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS678]
gi|353536531|gb|EHC06089.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS625]
Length = 615
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAVGL-DGHIAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ + I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDIL 266
>gi|389851608|ref|YP_006353842.1| inosine-5'-monophosphate dehydrogenase-like protein [Pyrococcus sp.
ST04]
gi|388248914|gb|AFK21767.1| putative inosine-5'-monophosphate dehydrogenase-like protein
[Pyrococcus sp. ST04]
Length = 136
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K K L + T V +A R M V ++++ D + + G T D+ RVI GL
Sbjct: 7 IKVYMTKKLLGVKPNTTVQEASRIMMEFEVGSLVVVDDHGNVIGFFTKSDVLRRVIVPGL 66
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P T V +IMT+N I V S++ E L+KM + + +H+ V E G+++ I ++ L +
Sbjct: 67 -PYDTPVREIMTKNLITVDSNTPLGEVLKKMAEHRIKHILVEEEGKIVGIFTLSDLLEAS 125
Query: 173 ISRMEKA 179
R+E A
Sbjct: 126 RRRLETA 132
>gi|343493223|ref|ZP_08731552.1| cyclic nucleotide-binding protein [Vibrio nigripulchritudo ATCC
27043]
gi|342826394|gb|EGU60826.1| cyclic nucleotide-binding protein [Vibrio nigripulchritudo ATCC
27043]
Length = 627
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD--------ANALLSGIVTDKDIT 104
V+ L + +TI + +A + MA V ++L+ D ++ L GI+TD+D+
Sbjct: 152 VRTLITREPVTIYSDQSIQEAAQTMAEENVSSLLVFDRETAENDEDDSPLKGIITDRDLC 211
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
TRV+A GL P Q+ V +M+ + + + ++ EA+ M++ HLPVV+N + + I++
Sbjct: 212 TRVLAAGLSP-QSAVYDVMSTDVVSLDHNAYVYEAMLTMLRYNVHHLPVVKNQQPLGIIE 270
Query: 165 IT 166
T
Sbjct: 271 AT 272
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +TI ++DA + ++ R+ A++ D N L+GI++++D+ R++ G+R + +
Sbjct: 12 SSMVTISPDASLTDAVKSLSEHRIGAIVAVDDNGRLAGILSERDVV-RIL--GVRGPEVL 68
Query: 119 ---VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
VS +MTR + D +++M +G+FRH+PVVE +I I+ I + +
Sbjct: 69 SEPVSAVMTRAVVTCARDETIQGIMERMTRGRFRHVPVVEGERLIGIISIGDVVKFRVEE 128
Query: 176 MEKAAEQ 182
ME+ + Q
Sbjct: 129 MERESAQ 135
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA + MA + + A+L+T+ L+ GIVT++D +V +T V IMT +
Sbjct: 35 TTVFDAVKLMAEKGIGALLVTEGEQLV-GIVTERDYARKVALMSRSSRETPVRDIMTADV 93
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+FV D + E + M + + RHLPV+ +G+++ ++ I + D IS EQ
Sbjct: 94 MFVRPDQTSSECMALMTENRLRHLPVMADGKLLGLISIGDLVKDIISEQRFIIEQ 148
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDA----NALLSGIVTDKDITTRVI 108
V L + +T V +A + M R V ++L+ ++ + L GI+TD+D+ RV+
Sbjct: 153 VADLMETSLVTCSADATVQEAAQIMTERNVSSLLVMESAGANQSPLVGIITDRDLRRRVL 212
Query: 109 AEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
AE +P +++VS++MT NP ++ D L EA+ M + + HLPV + V+ ++ I
Sbjct: 213 AEA-KPAESLVSEVMTGNPETISPDLLVFEAMLLMAERGYHHLPVHDGTRVVGMIVIGDL 271
Query: 169 L 169
L
Sbjct: 272 L 272
>gi|148979110|ref|ZP_01815318.1| hypothetical protein VSWAT3_05546 [Vibrionales bacterium SWAT-3]
gi|145961976|gb|EDK27265.1| hypothetical protein VSWAT3_05546 [Vibrionales bacterium SWAT-3]
Length = 629
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q SS++ VK L S+A I + + A MA V ++L+ D + +
Sbjct: 136 QANSSNNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAEENVSSLLIIDPDIVEDD 195
Query: 94 ------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
+ GI+TD+D+ TRV+AEGL P VS +MT I + ++ EA+ M++
Sbjct: 196 EDDSTPVIGIITDRDLCTRVLAEGLDPSDE-VSSVMTPEVISLDHNAYVYEAMMTMLRYN 254
Query: 148 FRHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 VHHLPVLKDKKPIGIIEAT 273
>gi|417951399|ref|ZP_12594502.1| hypothetical protein VISP3789_10914 [Vibrio splendidus ATCC 33789]
gi|342804885|gb|EGU40179.1| hypothetical protein VISP3789_10914 [Vibrio splendidus ATCC 33789]
Length = 629
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q SS++ VK L S+A I + + A MA V ++L+ D + +
Sbjct: 136 QANSSNNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAEENVSSLLIIDPDIVEDD 195
Query: 94 ------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
+ GI+TD+D+ TRV+AEGL P VS +MT I + ++ EA+ M++
Sbjct: 196 EDDSTPVIGIITDRDLCTRVLAEGLDPSDE-VSSVMTPEVISLDHNAYVYEAMMTMLRYN 254
Query: 148 FRHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 VHHLPVLKDKKPIGIIEAT 273
>gi|298291998|ref|YP_003693937.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296928509|gb|ADH89318.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 143
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T+ +A +A++R+ A+++TD + GI++++D+ + +G VS +MT
Sbjct: 19 PEATL-REAATLLATKRIGAIVVTDPERRVVGIISERDVVRVIGNDGPARLDDPVSSVMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ + + ++ M G+FRHLPVV++G+++ I+ I + ++ ME+ + Q
Sbjct: 78 SKVVTCDGNETVHQIMESMTAGRFRHLPVVQDGKLVGIISIGDVVKHRVAEMERESHQ 135
>gi|111225196|ref|YP_715990.1| hypothetical protein FRAAL5840 [Frankia alni ACN14a]
gi|111152728|emb|CAJ64472.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length = 128
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S L I G + A R MA+R+V A ++ DA++ GI+T++DI + AE PD +
Sbjct: 9 SLVLMIGPGHTLRQAARLMAARKVGAAVVHDADSQGYGILTERDILRSIAAE-QDPDVEI 67
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
+TR+ +F +A M++G FRHL V G V IL D+ +C D
Sbjct: 68 AGDHLTRDVVFADPAWSLDDAAAAMLRGGFRHLIVTSGGGVAGILSMRDVVRCWSD 123
>gi|443673369|ref|ZP_21138436.1| cyclic nucleotide-binding protein [Rhodococcus sp. AW25M09]
gi|443414051|emb|CCQ16774.1| cyclic nucleotide-binding protein [Rhodococcus sp. AW25M09]
Length = 646
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G AG RTV +L + A+ GT V DA R M + VL+ GI TD+D+
Sbjct: 124 GNAG--RTVGELVSAPAVFTSVGTTVRDAVRHMTEQGSSYVLVP-LRGSRHGIFTDRDLR 180
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
RV+A G+ D T + ++MT VT+D LA L M++ RH+PVV + GEV+ ++
Sbjct: 181 VRVVAAGIGVD-TPIERVMTSPAETVTADRLAGTVLMDMLERGLRHMPVVSSRGEVLGVV 239
Query: 164 D 164
D
Sbjct: 240 D 240
>gi|260769995|ref|ZP_05878928.1| Signal transduction protein [Vibrio furnissii CIP 102972]
gi|375133344|ref|YP_005049752.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
furnissii NCTC 11218]
gi|260615333|gb|EEX40519.1| Signal transduction protein [Vibrio furnissii CIP 102972]
gi|315182519|gb|ADT89432.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
furnissii NCTC 11218]
Length = 623
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 64 IPEGTIVSDACRRMAS---RRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
+ E T + + R M RR ++T ++ GIVTD+D+T V+A G+ Q +
Sbjct: 169 VDENTAIQEVARIMCDDERRRSSCAVITRGGDIV-GIVTDRDMTRSVVASGIDIQQPI-Q 226
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT+NP + +D I+A+ M+Q R LPVV +V+ +L + +++ A+ +
Sbjct: 227 RVMTQNPQLIQADDKVIQAISIMLQYNIRCLPVVRGNDVVGLLTTSHLVHNHRTQALFLI 286
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK S A A VE+Q
Sbjct: 287 EKIKYASSVNALAALKVEKQ 306
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L TI +V DA R MA + + A+ + + N + G+V+++D +V+ EG
Sbjct: 10 LKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVVE-NGTVVGVVSERDYARKVVLEGR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
T VS+IM+ I V S + M RHLPVVE+G+++ +L I + +A
Sbjct: 69 SSVGTPVSEIMSSKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEA 128
Query: 173 ISRMEKAAEQGSAI 186
I AEQ S I
Sbjct: 129 I------AEQASLI 136
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
K R S + V +A + +A+ V A+ + + N L+GIV+++D T +V G
Sbjct: 9 KNRNSTVFQVSPSVTVFEALKLLANYGVGALTVME-NGKLAGIVSERDYTRKVALMGKNS 67
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
+T V+ IMTR+ I VT ++ + M Q K RHLPV++ EV+ ++ I + D I+
Sbjct: 68 KETTVADIMTRDVITVTPNTGTHACMALMSQKKIRHLPVLDGAEVVGLISIRDLMDDIIA 127
Query: 175 RMEKAAEQ 182
E+ Q
Sbjct: 128 DQEQTISQ 135
>gi|339501881|ref|YP_004689301.1| nucleotidyltransferase with an cyclic nucleotide-binding
domain-containing protein [Roseobacter litoralis Och
149]
gi|338755874|gb|AEI92338.1| putative nucleotidyltransferase with an cyclic nucleotide-binding
domain protein [Roseobacter litoralis Och 149]
Length = 608
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+V L + +T GT V DA M SR + + +T+ + L +GIVT +D+ + +A G
Sbjct: 144 SVDALMVHNPVTCTAGTSVVDAAVLMTSRHISCLCITEQDRL-TGIVTLRDLVGKALAAG 202
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
L P QT +S I+ P+ + ++ + L M++ HLP+V+ G+++ I+ D+T+
Sbjct: 203 L-PPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGHLPIVDAGKLVGIVTQTDLTR 260
>gi|336312034|ref|ZP_08566989.1| putative signal-transduction protein [Shewanella sp. HN-41]
gi|335864290|gb|EGM69382.1| putative signal-transduction protein [Shewanella sp. HN-41]
Length = 615
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S + I V+ A M + RV ++L+ D N L GI+TDKD+ RV+A GL
Sbjct: 158 SDPIMIDAHASVTQAALLMRNARVSSLLVID-NHKLVGILTDKDLRNRVLAAGL-DGHLA 215
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
V + MT +P+ ++S++L EA+ M + HLP+++ G+ I ++ T L
Sbjct: 216 VHQAMTVSPVSISSNALIFEAMLLMSEYNIHHLPIIDEGKAIGMVTSTDIL 266
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 206 AFIETLR-ERMFKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRSNSALI 256
AF + LR E FK + +T ++++ + SDP+ + AA MR R +S L+
Sbjct: 130 AFAKRLRHEARFK---AKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLV 186
Query: 257 VTGSKIQGILTSKDVLMRVVAQNLSPELTL 286
+ K+ GILT KD+ RV+A L L +
Sbjct: 187 IDNHKLVGILTDKDLRNRVLAAGLDGHLAV 216
>gi|312136464|ref|YP_004003801.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224183|gb|ADP77039.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 188
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV+ +T P V++A M+ +RV ++++ D N+ G+VT+ DI +V+A+
Sbjct: 8 TVRDAMTPNVITAPPNISVAEAAAIMSKKRVGSIIIKD-NSGPIGLVTESDIIRKVVAKD 66
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
L+ + VS+IMT+N I + +S EA M + R LPVV+NG ++ I+
Sbjct: 67 LKASEVKVSEIMTKNLITIEPESEIREAAHLMAKNNIRRLPVVKNGVLVGII 118
>gi|209966480|ref|YP_002299395.1| nucleotidyltransferase [Rhodospirillum centenum SW]
gi|209959946|gb|ACJ00583.1| nucleotidyltransferase [Rhodospirillum centenum SW]
Length = 641
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 28 GNLSKPP-------SPQGESSSSVGGAG--GERTVKKLRLSKALTIPEGTIVSDACRRMA 78
G PP +P + G AG G R +R + PE +I ++A RRM
Sbjct: 143 GRFFAPPGSERRRDTPAAPRAGWDGPAGLLGRRLADLIRREPVVVAPEASI-AEAARRMR 201
Query: 79 SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE 138
+ + + A+ L+ GIVTD+D+ RV+A GL P VS +MT P V +L E
Sbjct: 202 QADISCLPVVAADRLV-GIVTDRDLRNRVLAAGLDP-SLPVSAVMTPEPTRVEDTALLFE 259
Query: 139 ALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
A + + + HLPV+ G ++ ++ T L
Sbjct: 260 AQILLARHRIHHLPVLRGGRLVGVVTGTDLL 290
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
+V+P +A AA++MR+ + +V ++ GI+T +D+ RV+A L P L
Sbjct: 186 VVAPEASIAEAARRMRQADISCLPVVAADRLVGIVTDRDLRNRVLAAGLDPSL 238
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T+++ A RRMA + + A+L+ + + + +GI T++D +++ G T VS++MT
Sbjct: 21 PSDTVLT-ALRRMADKGIGALLVMEGDQI-AGIFTERDYARKMVLLGRSSGDTPVSEVMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
R FV A + + M + + RHLPVVE G V+ ++ I + IS + EQ
Sbjct: 79 RAVRFVRPAQSAEQCMALMTENRLRHLPVVEGGRVVGLVSIGDLVKSVISEQQFIIEQ 136
>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
Length = 149
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A +MA + V A+L+ + N L G+ +++D T +V+ G QT+V +I++R I
Sbjct: 27 VYEAVEKMAEKNVGALLVME-NDRLVGMFSERDYTRKVVLHGKSSRQTLVREIISRPVIS 85
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V D EA++ M + + RHLPV+E+ +V+ ++ I + IS A Q
Sbjct: 86 VDPDCSVEEAMRIMTENRIRHLPVIESDQVVGVVSIGDLVNWMISAQHLALNQ 138
>gi|297566008|ref|YP_003684980.1| putative cyclic nucleotide-regulated nucleotidyltransferase
[Meiothermus silvanus DSM 9946]
gi|296850457|gb|ADH63472.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Meiothermus silvanus DSM 9946]
Length = 606
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ +P G V A + M R+ +VL+ GI+TD+D+ RV+AEGL P+ T V
Sbjct: 161 AVFVPRGYTVQQAAQLMRQHRISSVLVMGDPV---GILTDRDLRNRVLAEGLPPN-TPVE 216
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++M+ + + S EAL M+ HLP+ E G +I ++ T L
Sbjct: 217 QVMSTPLKTLAASSSLFEALSFMIAQDIHHLPLTEEGRIIGVVTDTVFL 265
>gi|429217476|ref|YP_007175466.1| signal transduction protein [Caldisphaera lagunensis DSM 15908]
gi|429134005|gb|AFZ71017.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caldisphaera lagunensis DSM 15908]
Length = 133
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+ KA+T +++ + M R+ +V++T + + GI T++D+T RV+AEG+ D+
Sbjct: 13 MKKAITTFPNVTIAEIAKIMYENRIGSVVITSPDDKVLGIFTERDLT-RVVAEGVPLDKH 71
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GE---VIAILDITKCL 169
V +MT+NP+ +T +A+ M + RHLPVV+N G+ +I++ D+T L
Sbjct: 72 V-GDVMTKNPVLITQSEGLSKAISLMYEKNVRHLPVVDNEGKIKGIISVRDLTSIL 126
>gi|328951426|ref|YP_004368761.1| hypothetical protein Marky_1921 [Marinithermus hydrothermalis DSM
14884]
gi|328451750|gb|AEB12651.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
DSM 14884]
Length = 556
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE I ++ACR M + V+++D N G+VTD+D+T RV+ +G+ P +T V ++MT
Sbjct: 16 PEAPI-AEACRLMEENNIGCVVVSD-NGKPLGLVTDRDLTLRVLRQGMDPKKTKVEQVMT 73
Query: 125 RNPIFVTSDSLAIEALQKMVQGK--FRHLPVVENGEVIAILDITKCLY 170
R + + D +EAL+ V+GK R L V + GE+ I + +Y
Sbjct: 74 REVLTLNEDMGLLEALEA-VRGKPIRRFLVVNDKGELSGIFTLDDVMY 120
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
+V V P P+A A + M E ++ K G++T +D+ +RV+ Q + P+ T VE
Sbjct: 10 EVVRVRPEAPIAEACRLMEENNIGCVVVSDNGKPLGLVTDRDLTLRVLRQGMDPKKTKVE 69
Query: 289 RFIMR 293
+ + R
Sbjct: 70 QVMTR 74
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
++ K + S + E V++A M +R+ ++L+ + ++GI T++D+ RV++ G
Sbjct: 10 SILKEKSSSVHCVAEQVTVAEAVNEMNRQRIGSILVKADDGTVTGIFTERDVLVRVVSAG 69
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV---IAILDITKC 168
P T V ++MT + + D+ +A+Q M + + RHLP+++ G + I+I D+T+
Sbjct: 70 RDPQATKVQEVMTPDFESIAPDTSVEDAMQLMTEQRVRHLPILDGGTLCGMISIGDVTRW 129
Query: 169 LYDAISRME 177
L ++ ME
Sbjct: 130 LLQ-VNEME 137
>gi|320449248|ref|YP_004201344.1| hypothetical protein TSC_c01460 [Thermus scotoductus SA-01]
gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 143
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T++ +A R++A + A+L+ + LL GI +++D +++ G T V ++MT
Sbjct: 19 PQATVL-EALRKLAEHDIGALLVMEGERLL-GIFSERDYARKLVLLGRFSKGTRVEEVMT 76
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGS 184
R I VT ++ EA++ M + + RHLPV+E G V+ ++ I + I+ E E+ S
Sbjct: 77 REVITVTPETTLQEAMRLMTEHRVRHLPVLEEGRVVGVVSIGDAVKAIITEQEVLIEELS 136
>gi|84393002|ref|ZP_00991769.1| hypothetical protein V12B01_03818 [Vibrio splendidus 12B01]
gi|84376356|gb|EAP93237.1| hypothetical protein V12B01_03818 [Vibrio splendidus 12B01]
Length = 629
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q S S+ VK L S+A I + + A MA V ++L+ D + +
Sbjct: 136 QANSDSNDANDLSTSKVKTLLTSEAPMIEKTRTIQQAATMMAEDNVSSLLIIDPDIVEDD 195
Query: 94 ------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
+ GI+TD+D+ TRV+AEGL P VS +MT I + ++ EA+ M++
Sbjct: 196 EDDSTPVIGIITDRDLCTRVLAEGLDPSDE-VSSVMTPEVISLDHNAYVYEAMMTMLRYN 254
Query: 148 FRHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 VHHLPVLKDKKPIGIIEAT 273
>gi|393722761|ref|ZP_10342688.1| signal-transduction protein [Sphingomonas sp. PAMC 26605]
Length = 142
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA +A RRV AV + + +A++ GI +++D+ + A G V++ MT PI
Sbjct: 23 VGDAVALLAERRVGAVPVMEGDAVV-GIFSERDVIHAIAAHGGDAMTRSVAETMTAPPIT 81
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
V D I AL M + + RHLPVV+ G VI + I + I ++E AE
Sbjct: 82 VAPDEAVIGALSLMTRRRIRHLPVVDQGRVIGFVSIGDLVKYRIDKIEADAE 133
>gi|325293135|ref|YP_004278999.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
gi|418408398|ref|ZP_12981714.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
gi|325060988|gb|ADY64679.1| putative inosine-5`-monophosphate dehydrogenase protein
[Agrobacterium sp. H13-3]
gi|358005312|gb|EHJ97638.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
Length = 144
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ A+++TDA+ ++ GI T++D+ V EG VS MT+N I
Sbjct: 25 IGEAAATLNAHKIGALVVTDADGVVLGIFTERDLVKVVAGEGAASLLQSVSVAMTKNVIR 84
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+S E ++ M G+FRH+PV ++G + I+ I + I +E AE
Sbjct: 85 CHHNSTTDELMEIMTGGRFRHIPVEDDGRLAGIISIGDVVKARIGEIEAEAEH 137
>gi|390449419|ref|ZP_10235025.1| putative signal transduction protein with CBS domains
[Nitratireductor aquibiodomus RA22]
gi|389664112|gb|EIM75620.1| putative signal transduction protein with CBS domains
[Nitratireductor aquibiodomus RA22]
Length = 143
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+TI ++DA + ++ R + AV++T A+ ++GI++++DI + +G + +S+
Sbjct: 15 VTIAPDMKLADAAQLLSERGIGAVVVTKADGRIAGILSERDIVRVIGRDGAGALEQPISR 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+MT + E +Q M G+FRHLPV ENG++ I+ I + I +E+ AE
Sbjct: 75 VMTSKVQRCHEQNTINEVMQIMTTGRFRHLPVEENGKIAGIISIGDVVKKRIEDVEREAE 134
>gi|323499175|ref|ZP_08104153.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
gi|323315808|gb|EGA68841.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
Length = 629
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
V+ L +A I + + +A +MA V ++L+ + + L L GI+TD+D+
Sbjct: 152 VRTLLTGEAPYIDQSESIQNAAIKMAEENVSSLLIINPDVLEDDEDDHSPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A+GL P VS +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAQGLDPSDN-VSSVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKQPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|291451849|ref|ZP_06591239.1| CBS domain-containing protein [Streptomyces albus J1074]
gi|291354798|gb|EFE81700.1| CBS domain-containing protein [Streptomyces albus J1074]
Length = 138
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M V A+ + A+ L GIVTD+D+ R +A G PD+T + ++ P+ VT
Sbjct: 24 AAQVMRDHNVGALPVKSADGALLGIVTDRDLVVRALAAGKTPDRTTLEDLVEDTPVAVTP 83
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
D+ + E LQ M + R + VVE+G+++ I+ D+ + L D
Sbjct: 84 DAHSTEVLQAMGNAQVRRVVVVEDGDLLGIISEADLAQHLAD 125
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TI V DA + MA + + AV++T+ + ++ GI+T++D +V+ QT V
Sbjct: 37 YTIAATASVFDAIKLMADKHIGAVIVTEGDEIV-GIMTERDYARKVVLMDRASKQTPVHD 95
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMT + +V D + + M + RHLPV+ENG+++ ++ I + + IS + +
Sbjct: 96 IMTSHVRYVRPDQTTDDCMALMTDKRMRHLPVIENGKLVGMISIGDLVKNIISEQQFTIQ 155
Query: 182 Q 182
Q
Sbjct: 156 Q 156
>gi|90579018|ref|ZP_01234828.1| cyclic nucleotide binding protein [Photobacterium angustum S14]
gi|90439851|gb|EAS65032.1| cyclic nucleotide binding protein [Photobacterium angustum S14]
Length = 625
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 25 ENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRL---SKALTIPEGTIVSDACRRMASRR 81
E+G L S Q + + + T KLR A+ I + + A + MA
Sbjct: 129 EDGARLRHAVSSQHDEN--------DLTTSKLRTLITRDAVIIDQNATIQTAAQTMAEEG 180
Query: 82 VDAVLLTDANA--------LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSD 133
V A+LL+D+NA ++GI+TD+D+ TRV+AEG+ V S +MT PI + +
Sbjct: 181 VSALLLSDSNATDDDDDNDYVTGIITDRDLCTRVLAEGISTSNPV-SSVMTAEPITLDHN 239
Query: 134 SLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+ EA+ M++ HLPV+ N + I ++ ++
Sbjct: 240 AYVFEAMLTMLRYNIHHLPVLRNKQPIGVISVS 272
>gi|85710353|ref|ZP_01041418.1| CBS domain protein [Erythrobacter sp. NAP1]
gi|85689063|gb|EAQ29067.1| CBS domain protein [Erythrobacter sp. NAP1]
Length = 620
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T P +S A M V + + D N L+GI TDKDI RV+A+ + P +S
Sbjct: 164 VTCPLDAPISSAVAIMVEHDVSTLAICD-NGALAGIFTDKDIRKRVVADAV-PFDHPISA 221
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCL 169
+MT NP + S EA+ M G FRHLP++++ G ++ I+ T L
Sbjct: 222 VMTANPRTLPQHSPIAEAMALMASGGFRHLPILDDSGALMGIVSATDIL 270
>gi|385805337|ref|YP_005841735.1| inosine-5'-monophosphate dehydrogenase-like protein V
[Fervidicoccus fontis Kam940]
gi|383795200|gb|AFH42283.1| inosine-5'-monophosphate dehydrogenase related protein V
[Fervidicoccus fontis Kam940]
Length = 142
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
E +VK L +T+ T + +A R M + +V++ + +L GI+T+KD+ T+VI
Sbjct: 7 EYSVKDLMSFNVVTVDPNTSLDEAVRIMLENNIGSVVVVNEKGVLIGILTEKDLITKVIK 66
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
L V IM+ ++V D+ EA+ M K HLPVV+NG V+ I+
Sbjct: 67 GKLDLKDLKVKDIMSAPVVYVEPDTPLYEAVALMQSKKIGHLPVVKNGRVVGII 120
>gi|262402357|ref|ZP_06078918.1| Signal transduction protein [Vibrio sp. RC586]
gi|262351139|gb|EEZ00272.1| Signal transduction protein [Vibrio sp. RC586]
Length = 629
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPTIDKQATIQQAALRMADENLSALLILDDYILHDAEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A G+ Q VS++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAHGIDT-QQAVSQVMTHEVISLDHNAYVYEAMLVMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|392553318|ref|ZP_10300455.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas spongiae
UST010723-006]
Length = 612
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T +SDA + M+ V ++++T+ N L+ G++TD+D+ RV+AEG P+ VV+ IMT
Sbjct: 164 PE-TKISDAAKTMSQFGVSSLMITENNKLV-GVITDRDLRNRVLAEGRSPND-VVATIMT 220
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
P V + A M++ HLPV++
Sbjct: 221 TKPKHVFEHNRVFSAFHLMLKQNIHHLPVLD 251
>gi|254507915|ref|ZP_05120044.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus 16]
gi|219549151|gb|EED26147.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus 16]
Length = 629
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 70 VSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDITTRVIAEGLRPDQTVVS 120
+ +A +MA V ++L+ D + L L GI+TD+D+ TRV+A+GL P+ VS
Sbjct: 169 IQNAAIKMADENVSSLLIIDPDVLEDDEDDNNPLVGIITDRDLCTRVLAQGLDPNDE-VS 227
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+MT I + ++ EA+ M++ HLPV+++ + I I++ T
Sbjct: 228 SVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKKPIGIIEAT 273
>gi|86146290|ref|ZP_01064615.1| hypothetical protein MED222_16301 [Vibrio sp. MED222]
gi|218709809|ref|YP_002417430.1| hypothetical protein VS_1821 [Vibrio splendidus LGP32]
gi|85836001|gb|EAQ54134.1| hypothetical protein MED222_16301 [Vibrio sp. MED222]
gi|218322828|emb|CAV19005.1| hypothetical protein VS_1821 [Vibrio splendidus LGP32]
Length = 629
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q S S+ VK L S+A I + + A MA V ++L+ D + +
Sbjct: 136 QANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDD 195
Query: 94 ------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
+ GI+TD+D+ TRV+AEGL P VS +MT I + ++ EA+ M++
Sbjct: 196 EDDSTPVIGIITDRDLCTRVLAEGLDPSDE-VSSVMTAEVISLDHNAYVYEAMMTMLRYN 254
Query: 148 FRHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 VHHLPVLKDKKPIGIIEAT 273
>gi|407072424|ref|ZP_11103262.1| hypothetical protein VcycZ_22884 [Vibrio cyclitrophicus ZF14]
Length = 629
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q S S+ VK L S+A I + + A MA V ++L+ D + +
Sbjct: 136 QANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAEDNVSSLLIIDPDIVEDD 195
Query: 94 ------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGK 147
+ GI+TD+D+ TRV+AEGL P VS +MT I + ++ EA+ M++
Sbjct: 196 EDDSTPVIGIITDRDLCTRVLAEGLDPSDE-VSSVMTAEVISLDHNAYVYEAMMTMLRYN 254
Query: 148 FRHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 VHHLPVLKDKKPIGIIEAT 273
>gi|375263425|ref|YP_005025655.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio sp. EJY3]
gi|369843852|gb|AEX24680.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio sp. EJY3]
Length = 620
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + + R M + L+ + LL GIVT++D+T RVIA+ + Q + S +MT NP
Sbjct: 169 TSIDETARVMVKEHRSSALIMQGHELL-GIVTERDMTKRVIAQCMNYSQPI-STVMTSNP 226
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+ +TS + +EA++ M+Q R LPVV G V I+ T
Sbjct: 227 LTITSGTSMLEAIETMMQHNVRSLPVVNAGRVQGIVTAT 265
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLS 281
N +AIVS + A+ M + +SALI+ G ++ GI+T +D+ RV+AQ ++
Sbjct: 159 NRDMAIVSADTSIDETARVMVKEHRSSALIMQGHELLGIVTERDMTKRVIAQCMN 213
>gi|206889630|ref|YP_002247887.1| nucleotidyltransferase family [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741568|gb|ACI20625.1| putative nucleotidyltransferase family [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 633
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+++ +++PE T + DA R M + ++++ D+ + GI+TDKD+ +V+A
Sbjct: 165 VEEIATKNVISVPENTSIRDAARLMCENSISSLIIMDSQGIPVGIITDKDLRRKVVASAR 224
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
D+ V IM+ I + + EA+ +M++ HL V++NG++ I+
Sbjct: 225 NVDEP-VKNIMSYPIIKIDAKDFCFEAVVRMLKYNIHHLLVIKNGKIEGII 274
>gi|399992907|ref|YP_006573147.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
gi|400754582|ref|YP_006562950.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398653735|gb|AFO87705.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398657462|gb|AFO91428.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
Length = 144
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE TI S+A + + ++ V+++ GI++++DI + G S+ MT
Sbjct: 20 PEATI-SEAAKLLGDHKIGTVVVSSDGETAEGILSERDIVRELARSGSGCLSKATSEYMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKAAE 181
R + TS S + L++M +G+FRH+PVVE+G++I ++ D+ K ++ MEK A
Sbjct: 79 RKLVTCTSQSNVEDVLKQMTEGRFRHMPVVEDGKLIGLVSLGDVVKAQLAEVA-MEKDAL 137
Query: 182 QG 183
+G
Sbjct: 138 EG 139
>gi|126734515|ref|ZP_01750261.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
gi|126715070|gb|EBA11935.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
Length = 608
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V L + +T + DA ++M +R+ + L A L+GI+T +D++ + +A+GL
Sbjct: 145 VATLMVPNPVTCAPTMTIQDAAKKMQDKRI-SCLCVVAKKKLTGILTVRDLSGKALAQGL 203
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
P+ T VS IMT +P ++ ++ + L M++ + HLP+VE G+++ I+ D+T+
Sbjct: 204 PPN-TPVSDIMTPDPRVLSPSAIGSDVLHMMMEYRLGHLPIVEAGKLVGIVTQTDLTR 260
>gi|148980339|ref|ZP_01816005.1| hypothetical protein VSWAT3_23654 [Vibrionales bacterium SWAT-3]
gi|145961281|gb|EDK26592.1| hypothetical protein VSWAT3_23654 [Vibrionales bacterium SWAT-3]
Length = 620
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A+ E TI S A + R AV+ + G++TD+D+T RVIA G+ + ++S
Sbjct: 167 AIVKSEQTIQSVAVEMLHQRSPCAVIYEGET--IVGLITDRDMTKRVIAHGVST-ENLIS 223
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRM 176
++MT +P+ V D L + A M+Q R+LPVV+ +V+ +L + + + AI +
Sbjct: 224 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLI 283
Query: 177 EKAAEQGSAIAAAVEGVERQ 196
EK GS + ERQ
Sbjct: 284 EKIKYAGSVKTMSSFTSERQ 303
>gi|145295429|ref|YP_001138250.1| hypothetical protein cgR_1366 [Corynebacterium glutamicum R]
gi|140845349|dbj|BAF54348.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 622
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ ++ T + DA +M V + LL + L GI+TD+D+ +RV+A+ L
Sbjct: 159 EFKIANPISCSPDTTIMDAAIKMDEFGVSS-LLVQIDGELKGIITDRDMRSRVVAKDLDI 217
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q V+++MT +P TS LA EA+ M + + HLP+V++G++ I+ DI + L +
Sbjct: 218 -QLPVTEVMTVDPRCATSQGLAFEAMLLMSELRIHHLPIVDDGQISGIVTAADIMRLLRH 276
Query: 171 DAI 173
D I
Sbjct: 277 DPI 279
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
SP + AA KM EF +S L+ +++GI+T +D+ RVVA++L +L + E
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDLDIQLPVTE 223
>gi|302536790|ref|ZP_07289132.1| signal-transduction protein [Streptomyces sp. C]
gi|302445685|gb|EFL17501.1| signal-transduction protein [Streptomyces sp. C]
Length = 130
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P ++ AC M+ RRV A ++ D + GI+T++DI I G PD+ V T
Sbjct: 16 PAHSLRQAACL-MSGRRVGAAVVLDPDHSGIGILTERDILNS-IGAGHDPDRESVGAHTT 73
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG---EVIAILDITKCLYDA 172
N +F T ++ EA + MV G FRHL V+E+G ++++ D+ +C A
Sbjct: 74 NNVVFCTPEATVQEAAEAMVHGGFRHLIVLEDGGPVGIVSVRDVIRCWVPA 124
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T+++ A RRMA + + A+L+ + + + +GI T++D +++ G T VS++MT
Sbjct: 21 PSDTVLT-ALRRMADKGIGALLVMEGDQI-AGIFTERDYARKMVLLGRSSGDTPVSEVMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
R FV A + + M + + RHLPVVE G V+ ++ I + IS + EQ
Sbjct: 79 RAVRFVRPTQSAEQCMALMTENRLRHLPVVEAGRVVGLVSIGDLVKSVISEQQFIIEQ 136
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A MA + +V++ D N L GI T++D +V+ +GL VS++MT NP
Sbjct: 39 VFEALGVMAEFDIGSVIVVD-NERLVGIFTERDYARKVVLKGLGSRDVSVSELMTPNPCT 97
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAA 189
VT E + M + +FRHLPVV++G ++ ++ I + +S+ + S+ A
Sbjct: 98 VTPTHTVDEVMAIMTENRFRHLPVVDHGRIVGMVTIGDMVKSVVSQQQATIRHLSSYIAG 157
>gi|409203437|ref|ZP_11231640.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
flavipulchra JG1]
Length = 612
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ER + +L A+TI + DA + M+ RV ++++T+ A L G+VTD+D+ RV+A
Sbjct: 148 ERKISELMTKDAVTIAPTASIRDAAKLMSQHRVSSIMVTE-QARLVGVVTDRDLRNRVLA 206
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
+ P +++IMT P + ++ AL M++ HLPV+
Sbjct: 207 QDKDPS-APLAEIMTEKPKHIFENNRVFSALHLMLKHNIHHLPVL 250
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
ET ER +S ++T++A ++P+ + AAK M + R +S ++ +++ G++T
Sbjct: 144 ETWSER----KISELMTKDA--VTIAPTASIRDAAKLMSQHRVSSIMVTEQARLVGVVTD 197
Query: 269 KDVLMRVVAQNLSPELTLVE 288
+D+ RV+AQ+ P L E
Sbjct: 198 RDLRNRVLAQDKDPSAPLAE 217
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 120
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A + + + A+++ D + L GI T++D +V+ +G +T V IMT +P+FV+
Sbjct: 3 EALEVLEEKNLGALVVVDESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVFVS 62
Query: 132 SDSLAIEALQKMVQGKF-RHLPVVENGE---VIAILDITK 167
D+ IE +++ KF RHLPV+EN E +I+I DI K
Sbjct: 63 PDT-DIEYCMQLMTNKFIRHLPVIENNELTGIISIGDIVK 101
>gi|83943213|ref|ZP_00955673.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
gi|83846221|gb|EAP84098.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
Length = 144
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ GT +S A ++ +R+ ++++ GI++++DI + EG V +
Sbjct: 17 TVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGREGGGCLDDTVEAL 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKA 179
MTR+ I D A + L KM QG+FRH+PV+E+G +I ++ D+ K +S MEK
Sbjct: 77 MTRDLITCAKDETADDILAKMTQGRFRHMPVLEDGVLIGLISLGDVVKARLMELS-MEKD 135
Query: 180 AEQG 183
A +G
Sbjct: 136 ALEG 139
>gi|374331449|ref|YP_005081633.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Pseudovibrio
sp. FO-BEG1]
gi|359344237|gb|AEV37611.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Pseudovibrio
sp. FO-BEG1]
Length = 609
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 53 VKKLRLSKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
++ S LT PE T V A ++M RV ++ +TD L GI+T +D++ +V+A
Sbjct: 144 IESFMASNPLTCRPEDT-VKQAAQQMRDARVSSLCVTDDEGRLIGIITVRDLSFKVLASE 202
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
L +T+V +MT NPI + ++ + L M++ + H+P+VE G ++ ++ D+T+
Sbjct: 203 LSV-ETLVEAVMTANPITLVPSAIGSDLLHLMMERRIGHVPIVEGGHLVGMVTQTDLTR- 260
Query: 169 LYDAISRMEKAAEQGSAIAAAVEGVE 194
+ AIS +AE S IA A + E
Sbjct: 261 -FQAIS----SAELVSQIATAKDAEE 281
>gi|126729413|ref|ZP_01745227.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Sagittula stellata E-37]
gi|126710403|gb|EBA09455.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Sagittula stellata E-37]
Length = 607
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
+ L ++ LT T V DA R M R V ++ +T+A +L GI T +D++ +V+ GL
Sbjct: 145 ETLMATRPLTCTPDTTVRDAARMMDERHVSSICITEA-GMLRGIATIRDMSGKVVGGGL- 202
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLY 170
P T +++IMT P+ + ++ + L M++ + H+P+ E ++ ++ D+T+ +
Sbjct: 203 PLDTPIARIMTAAPVTLPPSAIGSDVLHMMMERRIGHVPITEGPRLVGMVTQTDLTR--F 260
Query: 171 DAISRMEKAAEQGSA 185
A+S E AE A
Sbjct: 261 QAMSSAELVAEIAQA 275
>gi|254464558|ref|ZP_05077969.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Rhodobacterales bacterium Y4I]
gi|206685466|gb|EDZ45948.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Rhodobacterales bacterium Y4I]
Length = 607
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 42 SSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDK 101
S V G+ V+ + +T G A + M RR+ +V +TD + L GI+T +
Sbjct: 133 SQVSGSLATTRVEAIMARAPVTCSGGLTCQGAAQLMRDRRISSVCVTDGDRL-QGILTTR 191
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+T +++A G +P T V +MT +P+ + ++ + L M++ H+PVVE G++
Sbjct: 192 DLTAKILAAG-KPISTPVCNVMTPDPLTLAPSAIGSDVLHMMMEHGIGHIPVVEAGKLAG 250
Query: 162 IL---DITKCLYDAISRME 177
I+ D+T+ + A+S E
Sbjct: 251 IVTQTDLTR--FQAVSSGE 267
>gi|359439165|ref|ZP_09229144.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20311]
gi|359445456|ref|ZP_09235192.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20439]
gi|358026201|dbj|GAA65393.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20311]
gi|358040733|dbj|GAA71441.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20439]
Length = 631
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ T + D M V +VL+TD +S GI+TD+
Sbjct: 152 VKSLLHRDVVTVTMQTAIQDVAFLMTQESVSSVLVTDIEKQISDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
DI T+V+A+GL D T ++MT + + + S++ EA+ M++ HLPVV I
Sbjct: 212 DIRTKVVAQGLTYD-TPAKEVMTSSLVLLDSNAYVFEAVLAMLRDNLHHLPVVHKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA R + AVL+ D L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 22 RLMAERGIGAVLVMDGERLV-GIVSERDYARKVVLRDRSSATTSVAEIMSSQVVTVSPSE 80
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 81 TVERCMQLMTDGRFRHLPVVENGRVQSVISIGDLVKAVIEA 121
>gi|315126561|ref|YP_004068564.1| hypothetical protein PSM_A1481 [Pseudoalteromonas sp. SM9913]
gi|315015075|gb|ADT68413.1| hypothetical protein PSM_A1481 [Pseudoalteromonas sp. SM9913]
Length = 631
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ T + D M V +VL+TD +S GI+TD+
Sbjct: 152 VKSLLHRDVVTVTMQTAIQDVAFLMTQESVSSVLVTDIEKQISDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
DI T+V+A+GL D T ++MT + + + S++ EA+ M++ HLPVV I
Sbjct: 212 DIRTKVVAQGLTYD-TPAKEVMTSSLVLLDSNAYVFEAVLAMLRDNLHHLPVVHKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|254476772|ref|ZP_05090158.1| CBS domain protein [Ruegeria sp. R11]
gi|214031015|gb|EEB71850.1| CBS domain protein [Ruegeria sp. R11]
Length = 144
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +TI +S+A + + ++ V+++ GI++++DI + G
Sbjct: 13 SGVVTIAPNATISEAAKLLGEHKIGTVVVSSDGETAEGILSERDIVRELARTGPSCLSDC 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISR 175
MTR + TS S E LQ+M +G+FRH+PVVE G++I ++ D+ K ++
Sbjct: 73 AKNYMTRKLVTCTSQSNVEEVLQQMTEGRFRHMPVVEEGKLIGLVSLGDVVKAQLAEVA- 131
Query: 176 MEKAAEQG 183
MEK A +G
Sbjct: 132 MEKDALEG 139
>gi|357022478|ref|ZP_09084705.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356477923|gb|EHI11064.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 277
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A R + R+ AV++ L+ GIVTD+D+ R + GL P+ T ++++MT +PI
Sbjct: 9 ILEAARAIEENRIGAVVIQKGGRLV-GIVTDRDLAVRALGRGLDPNTTKIAEVMTESPIT 67
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+T +A++ M + R +P+VE+ V+ ++ + + D + +E+ A
Sbjct: 68 LTPRDSTDDAIRLMRERNIRRIPLVEHDRVVGMVTLDDLILDEAAPLEELA 118
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELT 285
+++P+DP+ AA+ + E R + +I G ++ GI+T +D+ +R + + L P T
Sbjct: 2 VLNPNDPILEAARAIEENRIGAVVIQKGGRLVGIVTDRDLAVRALGRGLDPNTT 55
>gi|254469544|ref|ZP_05082949.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pseudovibrio sp. JE062]
gi|211961379|gb|EEA96574.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Pseudovibrio sp. JE062]
Length = 608
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V A ++M RV ++ +TD L+ GI+T +D++ +V+A L P +T+V +MT
Sbjct: 157 PEDT-VKQAAQQMRDARVSSLCVTDDGRLI-GIITVRDLSFKVLASEL-PAETLVEAVMT 213
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKAAE 181
NPI + ++ + L M++ + H+P+VE G ++ ++ D+T+ + AIS +AE
Sbjct: 214 ANPITLGPAAIGSDLLHLMMERRIGHVPIVEGGHLVGMVTQTDLTR--FQAIS----SAE 267
Query: 182 QGSAIAAAVEGVE 194
S IA A + E
Sbjct: 268 LVSQIATAKDAEE 280
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 235 PSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
P D V AA++MR+ R +S + ++ GI+T +D+ +V+A L P TLVE
Sbjct: 157 PEDTVKQAAQQMRDARVSSLCVTDDGRLIGIITVRDLSFKVLASEL-PAETLVE 209
>gi|433463254|ref|ZP_20420813.1| hypothetical protein D479_16679 [Halobacillus sp. BAB-2008]
gi|432187764|gb|ELK45021.1| hypothetical protein D479_16679 [Halobacillus sp. BAB-2008]
Length = 142
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+TVK + S + +S A M R V A+ + D L G+VTD+D+ R A
Sbjct: 2 KTVKDIMTSDVVVCHTNDQLSQAASMMKERNVGAIPICDEQGNLMGMVTDRDLAIRGYA- 60
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+PD T + ++M+ + + D+ EA + M Q + R LPVVENG+++ +L +
Sbjct: 61 AKQPDSTPIQQVMSDHMYNCSPDTSLEEASRIMAQHQIRRLPVVENGKLVGMLSL 115
>gi|343507480|ref|ZP_08744885.1| hypothetical protein VII00023_17224 [Vibrio ichthyoenteri ATCC
700023]
gi|342798272|gb|EGU33896.1| hypothetical protein VII00023_17224 [Vibrio ichthyoenteri ATCC
700023]
Length = 628
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 37 QGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL--- 93
Q SSS V+ L S A + + +A +MA V ++L+ D +
Sbjct: 136 QAVSSSQNDNDLSTSKVRTLLTSAAPFVHTSETIQNAAIKMADENVSSLLIIDPDIAQND 195
Query: 94 -----LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
L GI+TD+D+ TRV+A+GL P V S +MT I + ++ EA+ M++
Sbjct: 196 DDGSGLVGIITDRDLCTRVLAQGLDPHDAVAS-VMTTEVISLDHNAYVYEAMLTMLRYNV 254
Query: 149 RHLPVVENGEVIAILDIT 166
HLPV+++ + I I++ T
Sbjct: 255 HHLPVLKDRQPIGIIETT 272
>gi|18313720|ref|NP_560387.1| hypothetical protein PAE2961 [Pyrobaculum aerophilum str. IM2]
gi|18161274|gb|AAL64569.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
IM2]
Length = 139
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V + + +T E + D +M RV +V++ D GIVT++D+ V+A L
Sbjct: 13 VSDIMVKNVITAKENEKIRDIAIKMYENRVGSVVIIDDEGKPIGIVTERDMVY-VLARAL 71
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIA------ILDI 165
PD T +MT NP+ + ++L IEA+ KM + RHLPVV+ +G+V+ I+D
Sbjct: 72 PPD-TPAWMVMTENPVVINENALVIEAMDKMRELNIRHLPVVDQSGKVVGMVSFRDIVDF 130
Query: 166 TKCL 169
T L
Sbjct: 131 TATL 134
>gi|337287767|ref|YP_004627239.1| KpsF/GutQ family protein [Thermodesulfobacterium sp. OPB45]
gi|334901505|gb|AEH22311.1| KpsF/GutQ family protein [Thermodesulfobacterium geofontis OPF15]
Length = 328
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 45 GGAGGERT---VKKLRLS--KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVT 99
GG+ GER VK++ L+ K + EGT++ DA + +R+ VL+T++ +L+GI+T
Sbjct: 190 GGSLGERLKVKVKEIMLTDEKIPVVSEGTLLEDAIVEIDKKRLGCVLITNSLGILTGIIT 249
Query: 100 DKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGE 158
D D+ R+ + V ++MTRNP + + LA EAL+ M + LPV+ + +
Sbjct: 250 DGDL-RRIFLKYKTYSNLKVEEVMTRNPKVIEENRLASEALEMMEKYLITVLPVINYDQK 308
Query: 159 VIAILDITKCL 169
++ IL + L
Sbjct: 309 LVGILHLHDIL 319
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S+ TI V +A R MA + + A+++TD +++ +GIVT++D +++ T
Sbjct: 15 SEVYTIGADDSVYEAIRLMAEKGIGALVVTDGDSI-AGIVTERDYARKIVLMDRSSKATP 73
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
V IM++ FV D + + M + + RHLPV+ENG +I ++ I + D I+ +
Sbjct: 74 VRDIMSKAVRFVRPDQTTEDCMALMTERRMRHLPVIENGRLIGMVSIGDLVKDIIAEQQF 133
Query: 179 AAEQ 182
+Q
Sbjct: 134 TIQQ 137
>gi|392555445|ref|ZP_10302582.1| hypothetical protein PundN2_08433 [Pseudoalteromonas undina NCIMB
2128]
Length = 631
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ T + D M V +VL+TD +S GI+TD+
Sbjct: 152 VKSLLHRDVVTVTTQTPIQDVAFLMTQESVSSVLVTDIEKQISDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
DI T+V+A+GL D T ++MT + + + S++ EA+ M++ HLPVV I
Sbjct: 212 DIRTKVVAQGLTYD-TPAKEVMTSSLVLLDSNAYVFEAVLAMLRDNLHHLPVVHKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|421743893|ref|ZP_16181914.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Streptomyces sp. SM8]
gi|406687695|gb|EKC91695.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Streptomyces sp. SM8]
Length = 138
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + M V A+ + A+ L GIVTD+D+ R +A G PD+T + ++ P+ VT
Sbjct: 24 AAQVMRDYNVGALPVKSADGALLGIVTDRDLVVRALAAGKTPDRTTLEDLVEDTPVAVTP 83
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD 171
D+ + E LQ M + R + VVE+G+++ I+ D+ + L D
Sbjct: 84 DAHSTEVLQAMGNAQVRRVVVVEDGDLLGIISEADLAQHLAD 125
>gi|87118536|ref|ZP_01074435.1| CBS domain protein [Marinomonas sp. MED121]
gi|86166170|gb|EAQ67436.1| CBS domain protein [Marinomonas sp. MED121]
Length = 673
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + A +M RV ++L+ + L+ GI+TD+D+ +RV+A+GL P + + IMTR P
Sbjct: 223 TSIHMAALQMTGARVSSLLVVEGETLI-GIITDRDLRSRVLAKGLSPLMPIAT-IMTRTP 280
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
F+ SL I A M + HLP+V++
Sbjct: 281 TFLDESSLCIHAQLLMSERNIHHLPIVDD 309
>gi|56460285|ref|YP_155566.1| signal protein [Idiomarina loihiensis L2TR]
gi|56179295|gb|AAV82017.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina loihiensis
L2TR]
Length = 610
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
E+TV + +++ T V +A + MAS + +VL+ D L+ GI+TD+D+ RV+A
Sbjct: 145 EQTVGSVVSMPPVSLSSSTSVQEAAKLMASHGISSVLVVDDTQLV-GILTDRDLRNRVVA 203
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
EGL P VS +MT+ P V + ++AL M HLPVV +
Sbjct: 204 EGL-PLDVRVSSVMTQLPESVYENRSLMDALTTMTSSNIHHLPVVND 249
>gi|126737496|ref|ZP_01753226.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. SK209-2-6]
gi|126720889|gb|EBA17593.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseobacter sp. SK209-2-6]
Length = 607
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T G A + M + + +T+ +A L GI+T +D+T +++AEGL P T VSK
Sbjct: 153 VTCSTGLTCQSAAQLMRQHHISCLCVTE-DAGLQGILTTRDLTEKLLAEGL-PFSTPVSK 210
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRME 177
+MT+ PI + +L + L M++ H+P+ + E++ I+ D+T+ + A++ E
Sbjct: 211 VMTQAPITLPPSALGSDVLHAMMEHHIGHVPITQGKEIVGIVTQTDLTR--FQAVNSAE 267
>gi|453051896|gb|EME99391.1| hypothetical protein H340_16746 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 142
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T K + A IP+ + +A +RM V A+ ++D N L GI+TD+DI + +AEG
Sbjct: 3 TAKDIMHEGAQWIPKTETLLNAAQRMRDLHVGALPVSDENERLCGIITDRDIVVKCVAEG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ + ++ P +V +++ E +++M R LPV+EN ++ ++
Sbjct: 63 HDASRCTAADLVQGTPRWVDANASVEEVVEEMGNHHVRRLPVIENKRLVGMI 114
>gi|18312938|ref|NP_559605.1| hypothetical protein PAE1873 [Pyrobaculum aerophilum str. IM2]
gi|18160433|gb|AAL63787.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
IM2]
Length = 142
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLT-DANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
+ I G + DA + MA R + ++++ D L+G+++++DI R IA G++P + V
Sbjct: 12 ICIKPGASILDAAKLMAQRNIGFLIVSSDCKRDLAGVISERDII-RAIASGIQPSEPV-D 69
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY--DAISRMEK 178
IMTR ++V D+ E + M + RH+ V++NG++ ++ I L D I R+ +
Sbjct: 70 NIMTRKVVYVYKDTPVWEIARLMRKYNIRHILVMDNGQIFGVISIRDLLKESDVIERLVE 129
Query: 179 AAEQ 182
AE+
Sbjct: 130 YAEE 133
>gi|258624473|ref|ZP_05719420.1| CBS domain-containing protein [Vibrio mimicus VM603]
gi|258583320|gb|EEW08122.1| CBS domain-containing protein [Vibrio mimicus VM603]
Length = 629
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-SQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|340029912|ref|ZP_08665975.1| signal-transduction protein [Paracoccus sp. TRP]
Length = 145
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+DA R ++ +R+ AV++++ + GI++++DI + G +S++MTR I
Sbjct: 24 VADAARLLSEKRIGAVVVSEDGRIPLGILSERDIVRELGRRGAAVLTLPISELMTRKLIT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAIS-RMEKAAEQGSAIA 187
T+ A+ L +M QG+FRHLPVV + GE++ ++ I D +S R+++ A + A+
Sbjct: 84 CTTGEDALVILDRMTQGRFRHLPVVNDEGEMVGLVSIG----DTVSARLKELAAEKEALT 139
Query: 188 AAVEG 192
+ G
Sbjct: 140 GMIMG 144
>gi|126174850|ref|YP_001050999.1| signal-transduction protein [Shewanella baltica OS155]
gi|386341603|ref|YP_006037969.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS117]
gi|125998055|gb|ABN62130.1| cyclic nucleotide-binding protein [Shewanella baltica OS155]
gi|334864004|gb|AEH14475.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Shewanella baltica OS117]
Length = 615
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+ D N L GI+TDKD+ RV+A GL V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVMD-NHKLVGILTDKDLRNRVLAAGL-DGHIAVHQAMTVSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
++S++L EA+ M + HLP+++ + I ++ T L
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDQDKAIGMVTSTDIL 266
>gi|358461185|ref|ZP_09171354.1| putative signal transduction protein with CBS domains [Frankia sp.
CN3]
gi|357073849|gb|EHI83346.1| putative signal transduction protein with CBS domains [Frankia sp.
CN3]
Length = 128
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
L I G + A R MA R V A ++ D + GI+T++D+ +AEG D + +
Sbjct: 12 LMIGPGHTLRQAARLMAGRGVGAAVVLDTDGAGYGILTERDLLL-ALAEGKDADVEIAAD 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
+TR+ +F D A M++G FRHL V E G V IL D+ +C
Sbjct: 71 HLTRDLVFADPDWSLDTAADAMLRGGFRHLVVTEGGTVAGILSMRDVVRC 120
>gi|383620574|ref|ZP_09946980.1| signal transduction protein with CBS domains [Halobiforma lacisalsi
AJ5]
gi|448697931|ref|ZP_21698809.1| signal transduction protein with CBS domains [Halobiforma lacisalsi
AJ5]
gi|445781297|gb|EMA32158.1| signal transduction protein with CBS domains [Halobiforma lacisalsi
AJ5]
Length = 140
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
++ L S +T EG V + RM V ++++TD + + GIVTD+D+ TRV+ G+
Sbjct: 3 IENLARSDVVTAQEGDSVQELATRMDESHVGSIVITDGDEPI-GIVTDRDLATRVLGNGM 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYD 171
P + +M+ +P + D+ + + M + R LPV ++ E++ I+ YD
Sbjct: 62 DPSEATAGDVMSEDPTTIDHDAGFYQMTELMSEDGVRRLPVCNDDDELVGII-----TYD 116
Query: 172 AISRM 176
+S +
Sbjct: 117 DLSEL 121
>gi|449145602|ref|ZP_21776405.1| signal-transduction protein [Vibrio mimicus CAIM 602]
gi|449078730|gb|EMB49661.1| signal-transduction protein [Vibrio mimicus CAIM 602]
Length = 629
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-SQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|83595073|ref|YP_428825.1| signal transduction protein [Rhodospirillum rubrum ATCC 11170]
gi|386351840|ref|YP_006050088.1| signal transduction protein [Rhodospirillum rubrum F11]
gi|83577987|gb|ABC24538.1| Predicted signal-transduction protein containing CBS domains
[Rhodospirillum rubrum ATCC 11170]
gi|346720276|gb|AEO50291.1| signal transduction protein [Rhodospirillum rubrum F11]
Length = 148
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T + R +A ++ AV++ + + +L GI+T++D+T R++A+G PD + IMT +P
Sbjct: 22 TTAREVARTLADNKIAAVVVME-DGVLKGIITERDVTARLVAKGGDPDSVMARAIMTPDP 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDITKCLYDAISRMEKAAE 181
+ + A +AL+ M +RHLPVV +GE +++I D+ + D + R K E
Sbjct: 81 DTLAPEDTAEDALRMMRLRGYRHLPVV-DGEGVVGMVSIRDLYAVVTDQLERDMKTHE 137
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI G V +A + MA + + A+L + ++ +GI T++D ++ G T V +
Sbjct: 18 TIAPGASVFEALKLMADKGIGALLAVEGESI-AGIFTERDYARKIALMGRTSAVTQVRDV 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT + +FV D + + +Q M + RHLPVVE G+++ ++ I + D IS + EQ
Sbjct: 77 MTTSVLFVRPDQTSEQCMQIMSNNRLRHLPVVEGGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|262171675|ref|ZP_06039353.1| Signal transduction protein [Vibrio mimicus MB-451]
gi|261892751|gb|EEY38737.1| Signal transduction protein [Vibrio mimicus MB-451]
Length = 629
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-SQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|84503059|ref|ZP_01001155.1| CBS domain protein [Oceanicola batsensis HTCC2597]
gi|84388603|gb|EAQ01475.1| CBS domain protein [Oceanicola batsensis HTCC2597]
Length = 144
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T VS + ++ R+ V+++ + GI++++DI + G + +
Sbjct: 16 VTVTPDTPVSQVAQVLSENRIGGVVVSTSGDTAEGILSERDIVRALSRRGPTCLEDRAEE 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
+MTR+P+ A E L++M G+FRH+PVVE+G++I I+ D+ K + +S ME+
Sbjct: 76 MMTRDPVCCQRRDTADEVLRRMTDGRFRHMPVVEDGKLIGIVTIGDVVKARLNELS-MER 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|258620166|ref|ZP_05715205.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|424807711|ref|ZP_18233113.1| hypothetical protein SX4_1622 [Vibrio mimicus SX-4]
gi|258587524|gb|EEW12234.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|342324248|gb|EGU20029.1| hypothetical protein SX4_1622 [Vibrio mimicus SX-4]
Length = 629
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A TI + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-SQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|357974039|ref|ZP_09138010.1| signal-transduction protein [Sphingomonas sp. KC8]
Length = 151
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+++ GT VSD +AS+R+ AV + D + + +GI++++DI + ++G V K
Sbjct: 24 ISVSTGTPVSDVVALIASKRIGAVPVMDGDTV-AGILSERDIIYHLQSDGAAILDWPVEK 82
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+MT I V D + AL M + + RHLPVV+ G ++ ++ I + I R+E A
Sbjct: 83 VMTAPAITVAGDVRILHALSLMTKRRVRHLPVVDQGRLVGLVSIGDLVKARIDRIEAEAN 142
>gi|113969857|ref|YP_733650.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
gi|114047087|ref|YP_737637.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
gi|113884541|gb|ABI38593.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
gi|113888529|gb|ABI42580.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
Length = 620
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL + V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGL-DGRIAVHQAMTTSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN 156
++S++L EA+ M + HLP++++
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIIDD 253
>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
Length = 142
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 51 RTVKKL---RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
+T+K+L + S+ ++P T V DA M + + A+L+ ++ LL GI T++D ++
Sbjct: 2 KTIKQLLKTKSSQIFSVPASTSVLDALHVMMEKNISALLIMESGQLL-GIFTERDYARKI 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I +G T ++++MT PI ++ D ++ M RHLPVV VI ++ I
Sbjct: 61 ILQGKSSADTFLAEVMTGQPITISPDDHIEVCMEIMTNKHIRHLPVVNETGVIGMVSI 118
>gi|294675913|ref|YP_003576528.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
domain-/unknown function domain-containing protein
[Rhodobacter capsulatus SB 1003]
gi|294474733|gb|ADE84121.1| cyclic nucleotide-binding domain protein/cystathionine
beta-synthase domain protein/protein of unknown function
DUF294 domain protein [Rhodobacter capsulatus SB 1003]
Length = 608
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T+++ A R M V ++ + D L GIVT +D++ +V+A+GL P T V+ +MT
Sbjct: 156 PETTVLT-AARMMRDAHVSSLGVVDPGERLLGIVTQRDLSNKVLADGL-PTGTAVAAVMT 213
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAIS 174
P+ + +L + L M++ + HLP+ E+G + ++ D+T+ + A+S
Sbjct: 214 AGPVSLPPTALGSDILHIMLERRIGHLPITEDGRFVGMITQTDLTR--FQAVS 264
>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
gi|333915885|ref|YP_004489617.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
acidovorans SPH-1]
gi|333746085|gb|AEF91262.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
Length = 146
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA R MA + + A+L+ + + + +GIVT++D ++ G T+V +MTR+ +F
Sbjct: 25 VLDALRLMADKGIGALLVMEGSEI-AGIVTERDYARKIALLGRTSGATLVRDVMTRDVLF 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQ 182
V E + M + + RHLPVV E G+++ ++ I + D IS + EQ
Sbjct: 84 VGPTQTTQECMAVMTENRLRHLPVVDEGGKLLGLISIGDLVKDIISEQKFIIEQ 137
>gi|392546664|ref|ZP_10293801.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas rubra
ATCC 29570]
Length = 612
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G + E V +L A+T+ + +A + M RV ++++T+ L +G+VTD+D+
Sbjct: 143 GNSWSEHPVSELMSRAAVTLMPDASIQEAAKVMKKHRVSSIMVTEHEQL-AGVVTDRDLR 201
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
RV+A GL P + + +IMT P + ++ AL M++ HLPV+
Sbjct: 202 NRVLAAGLDPARA-IGEIMTVKPKHIFENNRIFSALHLMLKHNIHHLPVL 250
>gi|158312954|ref|YP_001505462.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158108359|gb|ABW10556.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 152
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 47 AGGERTVKKLRLSKALTIPEG-----------TIVSDACRRMASRRVDAVLLTDANALLS 95
+G R + +R S+ +++ EG + A R MA+R V A ++ D +
Sbjct: 10 SGDTRVSEDMRASEGVSVSEGMSALVLVVGPGHTLRQAARLMAARHVGAAVVLDGDGQGF 69
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI+T++D+ R IA PD VV +TR+ + D EA M++G FRHL V
Sbjct: 70 GILTERDVL-RAIAADQDPDVEVVGDHVTRDVVVAAPDWSLDEAAAAMLRGGFRHLVVTT 128
Query: 156 NGEVIAIL---DITKCL 169
EV +L D+ +C
Sbjct: 129 GAEVEGVLSMRDVVRCW 145
>gi|407798524|ref|ZP_11145431.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Oceaniovalibus guishaninsula JLT2003]
gi|407059485|gb|EKE45414.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Oceaniovalibus guishaninsula JLT2003]
Length = 601
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
E V+ L ++ TI + DA R M R+ ++++ + + L GI+T +D++ RV+A
Sbjct: 136 ETRVETLMTARPRTIAPDLPLCDAARLMRDDRISSLMVVE-DGTLQGILTVRDVSNRVVA 194
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DIT 166
E L Q+ V+++MTR+P+ + D++ + L M++ H+P+V G ++ I+ D+T
Sbjct: 195 ERLDA-QSPVARVMTRDPVTLPPDAIGSDVLHLMMERGIGHVPIVGAGGLVGIVTQTDLT 253
Query: 167 KCLYD 171
+ D
Sbjct: 254 RFQAD 258
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 217 KPSLSTIITEN---AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLM 273
+P+L+ E A+ ++P P+ AA+ MR+ R +S ++V +QGILT +DV
Sbjct: 131 RPALAETRVETLMTARPRTIAPDLPLCDAARLMRDDRISSLMVVEDGTLQGILTVRDVSN 190
Query: 274 RVVAQNLSPE 283
RVVA+ L +
Sbjct: 191 RVVAERLDAQ 200
>gi|383770962|ref|YP_005450025.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
gi|381359083|dbj|BAL75913.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
Length = 142
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R++ + + +++ G ++ A + + +++ AVL+ + + L GI++++DI RVI E
Sbjct: 4 RSILNTKGHQIMSVEPGAKLAAAVKLLGEKKIGAVLVMN-QSRLEGILSERDIV-RVIGE 61
Query: 111 -GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
G VS++MTR + E ++ M +GKFRHLPV++NG+V+ ++ I
Sbjct: 62 RGAGALDEPVSEVMTRKVVTCKEADTVAELMEMMTEGKFRHLPVIDNGKVVGLISI 117
>gi|365845115|ref|ZP_09385911.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
gi|364561834|gb|EHM39711.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
Length = 145
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ L ++I G S A R ++ V ++ + + L GIVTD+DI R +A
Sbjct: 3 VRDLMNPSVVSITPGESASLAARLLSRHNVGSLPVCGEDGGLRGIVTDRDIILRCVAAEE 62
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P +T V IMTRN V+ D A EA + M + R LPV+E G+V+ ++ D+ +C
Sbjct: 63 DPLKTQVKDIMTRNCAVVSPDDDAREATRLMAAKQVRRLPVLEGGKVVGMVSLGDLAQC 121
>gi|313680932|ref|YP_004058671.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313153647|gb|ADR37498.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 136
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ +T+P V+DA MA V +V++ + + GI+TD+DI RV+ GL PD+T
Sbjct: 9 ADVITLPPTATVTDAAALMADMNVGSVVVAEGLKPV-GILTDRDIVVRVVRPGLDPDETP 67
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRME 177
V ++MT P+ + EAL+++ R P+V+ G ++ I + L +
Sbjct: 68 VFRVMTPEPLVLEEQMSLFEALEEVKHKGVRRYPIVDYEGNLVGIFTLDDVL-------Q 120
Query: 178 KAAEQGSAIAAAVEG 192
+ SA+A VEG
Sbjct: 121 LLGLEMSAVARVVEG 135
>gi|89072944|ref|ZP_01159491.1| cyclic nucleotide binding protein/2 CBS domains [Photobacterium sp.
SKA34]
gi|89051162|gb|EAR56618.1| cyclic nucleotide binding protein/2 CBS domains [Photobacterium sp.
SKA34]
Length = 625
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 52 TVKKLRL---SKALTIPEGTIVSDACRRMASRRVDAVLLTDANA--------LLSGIVTD 100
T KLR A+ I + + A + MA V A+LL+D+NA ++GI+TD
Sbjct: 148 TTSKLRTLITRDAVIIDQNETIQTAAQTMAEEGVSALLLSDSNATDDDDDNDYVTGIITD 207
Query: 101 KDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVI 160
+D+ TRV+AEG+ V S +MT PI + ++ EA+ M++ HLPV+ N + I
Sbjct: 208 RDLCTRVLAEGISTSNPV-SSVMTAEPITLDHNAYVFEAMLTMLRYNIHHLPVLRNKQPI 266
Query: 161 AILDIT 166
++ ++
Sbjct: 267 GVISVS 272
>gi|344344540|ref|ZP_08775402.1| cyclic nucleotide-binding protein [Marichromatium purpuratum 984]
gi|343803947|gb|EGV21851.1| cyclic nucleotide-binding protein [Marichromatium purpuratum 984]
Length = 619
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T PE T + +A M+ RV ++L+ + L +G++TD+D+ +R +A GL P + V +I
Sbjct: 165 TGPE-TSIREAAGIMSEHRVSSLLIMEGEHL-AGMITDRDLRSRCLAAGL-PSERPVREI 221
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
MT + D+L EAL M + HLPV+E G V+ ++ D+T+
Sbjct: 222 MTERLHSIEPDTLGFEALLTMTRLNVHHLPVIERGRVMGLVSSTDLTR 269
>gi|94499933|ref|ZP_01306468.1| CBS domain protein [Bermanella marisrubri]
gi|94427791|gb|EAT12766.1| CBS domain protein [Oceanobacter sp. RED65]
Length = 620
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R + L + +I T + +M+ R+ ++L+ + + LL GIVTD+DI +R +A+
Sbjct: 154 RPIADLMSGEVFSITPNTSIQSCAAQMSEERISSMLIMENDRLL-GIVTDRDIRSRAVAQ 212
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
L + VS IMT P ++ + +A M Q HLPV E+G+++ ++
Sbjct: 213 SLSY-EAEVSVIMTEQPKYIEASKSLFDATLYMTQSGIHHLPVQEDGKIVGVI 264
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPE 283
+V ++P+ + A +M E R +S LI+ ++ GI+T +D+ R VAQ+LS E
Sbjct: 162 GEVFSITPNTSIQSCAAQMSEERISSMLIMENDRLLGIVTDRDIRSRAVAQSLSYE 217
>gi|407644859|ref|YP_006808618.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Nocardia brasiliensis ATCC 700358]
gi|407307743|gb|AFU01644.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Nocardia brasiliensis ATCC 700358]
Length = 613
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVL--LTDANALLSGIVTDKDITTR 106
G R +L S + + T V DA RM R V +VL L D + GI TD+D+ R
Sbjct: 149 GSRPAGELVSSAPVFVTPETSVRDAVVRMTERHVSSVLIRLPDGD---FGIFTDQDLRAR 205
Query: 107 VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDI 165
V+A GL P +S++M+ VT+D L +M+ RHLPVV GEV+ +L+
Sbjct: 206 VVAAGL-PVDVAISRVMSAPARRVTADLTGEAVLMEMLDCGLRHLPVVNRRGEVLGVLED 264
Query: 166 TKCL 169
+ L
Sbjct: 265 SDLL 268
>gi|333910613|ref|YP_004484346.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751202|gb|AEF96281.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 176
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
+T+ T V D M +++ V++ + ++ GIVT++D+ ++A+ L+P +V
Sbjct: 11 VITVDTNTTVYDVANIMKEKKIGCVVVVEKDSKPLGIVTERDLVINIVAKNLKPKDVLVK 70
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC---LYDAIS 174
IMT I ++ ++ ++A +KM + + LPVVE +++ I+ DITK +++ +
Sbjct: 71 DIMTTKLITISPNATLMDAARKMAEKNIKRLPVVEGDKLLGIITVSDITKISPKIFEIMY 130
Query: 175 RMEK-AAEQGSAIAAAVEGVERQWGSNFSA 203
M K E +EG+ GS S
Sbjct: 131 EMSKIGGELPYRGDEYIEGICEVCGSQGSV 160
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 14 APSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTI----PEGTI 69
AP + + + + G S S + S G+ TV KL +K I P T
Sbjct: 2 APFSYQPPTRGDKAGQQSHSQSAESNLSH------GQSTVAKLLEAKGDAIFAIRPNDT- 54
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSKIMTRN 126
V A + +R+ A+++TD N L GI++++DI R +AE P T+ V IMTR
Sbjct: 55 VGHAVEALRDKRIGALVVTDQNGALQGILSERDIVRR-LAE--TPGHTLPQLVEDIMTRE 111
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
D L I+ + M +G+FRHLPVV++ + ++ + + + +E A
Sbjct: 112 VKTCKPDDLLIDVAKVMNEGRFRHLPVVKDDRLCGMITVGDVVNFRLQELEYEA 165
>gi|117920024|ref|YP_869216.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
gi|117612356|gb|ABK47810.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
Length = 620
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A M + RV ++L+TD N L GI+TDKD+ RV+A GL + V + MT +PI
Sbjct: 169 VTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGL-DGRIAVHQAMTTSPIS 226
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE 155
++S++L EA+ M + HLP+++
Sbjct: 227 ISSNALIFEAMLLMSEHNIHHLPIID 252
>gi|338738933|ref|YP_004675895.1| hypothetical protein HYPMC_2103 [Hyphomicrobium sp. MC1]
gi|337759496|emb|CCB65325.1| conserved protein of unknown function with 2 CBS domains
[Hyphomicrobium sp. MC1]
Length = 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTVVSKIMTRNPIFVTSDS 134
R+ASR++ A+++ + N L +GI++++D+ R+IAE G + + MTR+ I T D
Sbjct: 29 RLASRKIGAIVILENNKL-AGIISERDLI-RLIAEHGPKALAMTANDGMTRDVISCTRDC 86
Query: 135 LAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
++ M +G+FRH+PV+E+GE++ I+ I + I+ ++
Sbjct: 87 TIDGVMETMTKGRFRHVPVLEDGELVGIISIGDVVKHHIAEVQ 129
>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA + MA+ +V AVL+ D GI T++D+T + A G V MTRNP+
Sbjct: 25 DAVQGMAAFKVGAVLVVDEKDNTLGIFTERDVTRCLAAHGAPVLAEPVGDHMTRNPLTCQ 84
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAA 189
+ M FRH+PV++NG++ I+ I + +++ R E AE A A
Sbjct: 85 GSDTVASVMSTMSTHHFRHMPVMDNGQMKGIVSIRDLVSNSLERAEFEAEAMRAYVTA 142
>gi|220931478|ref|YP_002508386.1| putative signal-transduction protein with CBS domains
[Halothermothrix orenii H 168]
gi|219992788|gb|ACL69391.1| putative signal-transduction protein with CBS domains
[Halothermothrix orenii H 168]
Length = 141
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K + S +I + V DA + M S V +V +TD N + GI+TD+DIT R +A+
Sbjct: 3 LKDIMTSDVTSINPNSSVKDAAQVMRSLNVGSVPVTDGNRPV-GIITDRDITIRSVAQAG 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
+ V ++MT + ++ T D EA Q M + R LPVVENG ++ I+ L D
Sbjct: 62 NINMPV-HQVMTGDIVYGTPDMSVEEAAQIMASKQIRRLPVVENGRLVGIV----SLGDL 116
Query: 173 ISRMEKAAEQGSAIAA 188
R E G A+ +
Sbjct: 117 AVRERSDIEAGKALTS 132
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA +A V A+++ D L+ G ++++D T +V +G + VS+IMT +
Sbjct: 22 TSVFDALATLARFEVGALMVMDGEKLV-GFLSERDYTRKVALQGKNSKEMKVSEIMTPDV 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ VT + + M Q KFRHLPVV+ +V+ ++ I + D IS E+ +Q
Sbjct: 81 MTVTPQTRTRACMALMSQRKFRHLPVVDGDKVVGMISIQDLMDDIISEHEQTIDQ 135
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE + V +A + S+ + ++++ + L GI T++D +VI +G +T V IMT
Sbjct: 20 PESS-VYEALETLESKNLGSLVVLEECGKLDGIFTERDYARKVILKGRSSKETRVMDIMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
+P+FVT D+ +Q M RHLPV+++ E++ ++ I + I R
Sbjct: 79 ESPVFVTPDTKIDYCMQLMTDKHIRHLPVLDDNELVGLISIGDLVKHIIDR 129
>gi|410623904|ref|ZP_11334714.1| CBS domain-containing protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156600|dbj|GAC30088.1| CBS domain-containing protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 610
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+TI + + A M+ +RV +VL+ + + LL GIVTD+D+ RV+A GL Q V +
Sbjct: 158 ITISQSASIQRAGALMSQKRVSSVLIIEHDQLL-GIVTDRDLRNRVVAVGLDM-QLPVRQ 215
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
IMT NP ++T + +A+ M + HLPV++
Sbjct: 216 IMTENPAYLTQNKTLFDAVCLMNEKSINHLPVLD 249
>gi|336325914|ref|YP_004605880.1| hypothetical protein CRES_1361 [Corynebacterium resistens DSM
45100]
gi|336101896|gb|AEI09716.1| hypothetical protein CRES_1361 [Corynebacterium resistens DSM
45100]
Length = 617
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA + M RV ++L+ D N L GIVTD+D+ +V+A P T V++IM +
Sbjct: 169 TSVQDAAKMMNDLRVSSLLIID-NDKLVGIVTDRDMR-KVVANNT-PVSTTVAEIMPKKL 225
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-YDAI 173
+ +SD++ IEA+ M + HLPVV++G V I+ DI + L +D I
Sbjct: 226 VTRSSDTVVIEAMVLMAERDIHHLPVVDDGRVTGIVTAADIMRLLKHDPI 275
>gi|99080949|ref|YP_613103.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99037229|gb|ABF63841.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 144
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 58 LSKALTI-PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
+++ +TI PE TI + A + ++ + V+++ + GI++++DI ++ G
Sbjct: 12 IAEVVTITPEATIEA-AAQLLSEHGIGTVVVSPDKSKPVGILSERDIVRQLAKVGSVCLN 70
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAI 173
V MTR+ + T DS+A +AL M +G+FRH+PVVE+G ++ I+ D+ K + +
Sbjct: 71 HKVEDYMTRDVVTCTQDSVAEQALSTMTEGRFRHMPVVEDGALVGIISLGDVVKAQLNEV 130
Query: 174 SRMEKAAEQG 183
+ MEK A +G
Sbjct: 131 A-MEKTALEG 139
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L TI +V DA R MA + + A+ + + N + G+V+++D +V+ +G
Sbjct: 10 LKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVVE-NGTVVGVVSERDYARKVVLKGR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
T VS+IM+ I V S + M RHLPVVE+G+++ +L I + +A
Sbjct: 69 SSVGTPVSEIMSSKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEA 128
Query: 173 ISRMEKAAEQGSAI 186
I AEQ S I
Sbjct: 129 I------AEQASLI 136
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ ++ + A + MA + + A+++ + L +GIV+++D +V + P VS+IMT
Sbjct: 22 PDSSVFA-AVKLMAEKGIGALVVLEGERL-AGIVSERDYVRKVAVQERSPANLKVSEIMT 79
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
I V+ A ++ M G+ RHLPVVE+G ++ +L I + D IS+ E +
Sbjct: 80 AKVITVSPGEDARHCMELMTNGRLRHLPVVEDGRLVGLLSIGDLVKDIISQQENLIQH 137
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L+ + TI +V DA R MA + + A+ + + N ++ G+V+++D +VI +G
Sbjct: 10 LKDLQNQQVHTIGPDQMVLDALRLMAEKNIGALPVVEGNVMV-GVVSERDYARKVILKGR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
T V +IM+ I V S + M RHLPVVE+G+++ +L I + +A
Sbjct: 69 SSVGTPVREIMSNKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEA 128
Query: 173 ISRMEKAAEQGSAI 186
I AEQ S I
Sbjct: 129 I------AEQASLI 136
>gi|307945229|ref|ZP_07660565.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Roseibium sp. TrichSKD4]
gi|307771102|gb|EFO30327.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Roseibium sp. TrichSKD4]
Length = 635
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
+ L + T T V +A M + V ++ +T+ L GI+T +D++ +V+AEG R
Sbjct: 171 ETLMAANPYTCQPNTTVREAAVLMRDKHVSSLCITNGEDSLKGIITVRDLSGKVLAEG-R 229
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLY 170
T VS IMT +P +T ++ + L M++ + H+P+V G ++ I+ D+T+ Y
Sbjct: 230 SYDTPVSDIMTVSPFTLTPSAIGSDVLHLMMERRIGHVPIVSGGRLVGIITQTDLTR--Y 287
Query: 171 DAISRMEKAAE 181
A++ + +E
Sbjct: 288 QAVNSADMVSE 298
>gi|83954348|ref|ZP_00963068.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
gi|83841385|gb|EAP80555.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
Length = 144
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ GT +S A ++ +R+ ++++ GI++++DI + EG V +
Sbjct: 17 TVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGREGGGCLDDTVEAL 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKA 179
MTR+ I D A + L KM QG+FRH+PV+++G +I ++ D+ K +S MEK
Sbjct: 77 MTRDLITCAKDETADDILAKMTQGRFRHMPVLQDGVLIGLISLGDVVKARLMELS-MEKD 135
Query: 180 AEQG 183
A +G
Sbjct: 136 ALEG 139
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
R++ ++ V D + MA + + A+L+ D N L+GI +++D +VI + D
Sbjct: 11 RINALYSVSSDQTVLDGLKVMAEKNIGALLVVD-NGELTGIFSERDYARKVILKDRHSDD 69
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T ++ +MT N I + D E + M RHLPVV+ GE+I I+ I + AI R
Sbjct: 70 TRIADVMTANVITIGPDQSLEEGMVIMSDRHIRHLPVVDKGELIGIISINDIVT-AIIRD 128
Query: 177 EK 178
+K
Sbjct: 129 QK 130
>gi|126737918|ref|ZP_01753648.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126721311|gb|EBA18015.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 144
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ T+VSDA R ++ +++ V+++ GI++++DI + G VS
Sbjct: 16 ITVTPDTLVSDAARLLSDKKIGTVMVSSDGEAADGILSERDIVRELGQNGPGCLTDPVSS 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRMEK 178
MT + T+ S E L++M G+FRH+PV+E+G+ +I++ D+ K ++ MEK
Sbjct: 76 YMTSKLVTCTAQSNVEEVLKQMTTGRFRHMPVLEDGKLKGLISLGDVVKAQLAEVA-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|182678555|ref|YP_001832701.1| signal-transduction protein [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634438|gb|ACB95212.1| putative signal-transduction protein with CBS domains [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 143
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+ ++ AV++TDA+ L GI++++DI + G + VS MT + + V+ D
Sbjct: 30 LMKNKIGAVVVTDAHGHLLGIISERDIVMALGQRGPIALEDAVSTHMTSHVVTVSEDETV 89
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
E + KM +G+FRHLPV+ NG + ++ I + + MEK
Sbjct: 90 HETVSKMNRGRFRHLPVLLNGRLCGLVSIGDVVKYRLEEMEK 131
>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
gi|449066089|ref|YP_007433171.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449034597|gb|AGE70023.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
Length = 164
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A M + ++++ D +SGI+T++D+ R IAEG + VS MTRN I VT
Sbjct: 25 AAEEMKKHNIGSLIVIDNRGKVSGIITERDLV-RAIAEG--NINSTVSNYMTRNVIGVTE 81
Query: 133 DSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL---DITKCLYD--AISRMEKAAE-QGSA 185
+ +ALQ M+ FRHLP++ ++G V IL D+ + L D ++ ++ E +G+
Sbjct: 82 NFDPNQALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLTYGKEPEEVRGTG 141
Query: 186 IAAAVEGVE 194
IA V GVE
Sbjct: 142 IACPVCGVE 150
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
++P V A + MA + + A+L+ + A+ GIV+++D +VI +T+V I
Sbjct: 18 SVPPTATVYAALQLMAEKGIGALLVIEHGAI-QGIVSERDYARKVILMQRTSRETLVRDI 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT I+V + E + M + + RHLPV+E E+I +L I + D IS + EQ
Sbjct: 77 MTNAVIYVGASQTTDECMALMTRHRLRHLPVMEGEELIGMLSIGDLVKDIISEQQFIIEQ 136
>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 139
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP-I 128
+++A RRM + V++ D ++GIVTD+DIT RV+AEG P++T ++ T+ I
Sbjct: 22 IAEAARRMKTVNAGDVIVLDNTGRVAGIVTDRDITLRVVAEGRDPERTATREVCTQTGLI 81
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRMEKAAEQ 182
+ D+ A+Q + + R LPVV+ G VI++ D+ + L + + E +A Q
Sbjct: 82 TIAPDTTTDTAVQLIRERHIRRLPVVDKGRPVGVISLGDLARALDPSSTLAEVSAAQ 138
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS-KIQGILTSKDVLMRVVA 277
+++ ++T N A V P+A AA++M+ + +++ + ++ GI+T +D+ +RVVA
Sbjct: 4 TVADVMTRNP--ATVGMDQPIAEAARRMKTVNAGDVIVLDNTGRVAGIVTDRDITLRVVA 61
Query: 278 QNLSPELT 285
+ PE T
Sbjct: 62 EGRDPERT 69
>gi|188581471|ref|YP_001924916.1| signal-transduction protein with CBS domains [Methylobacterium
populi BJ001]
gi|179344969|gb|ACB80381.1| putative signal-transduction protein with CBS domains
[Methylobacterium populi BJ001]
Length = 143
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 66/119 (55%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +T+P + +A +A +++ A+++ DA + GI++++D+ + +EG
Sbjct: 12 SSVVTVPPHRTIDEAIHLLAEKQIGALVVGDAEGRVIGILSERDVMRALASEGASALDRP 71
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
+S MT + T + + ++ M +G+FRHLPVVE+G ++ ++ I + I+ +E
Sbjct: 72 ISHYMTAKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGHLVGVVSIGDVVKRRIATVE 130
>gi|449068365|ref|YP_007435446.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036873|gb|AGE72298.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
Length = 150
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A M + ++++ D +SGI+T++D+ R IAEG + VS MTRN I VT
Sbjct: 11 AAEEMKKHNIGSLIVIDNRGKVSGIITERDLV-RAIAEG--NINSTVSNYMTRNVIGVTE 67
Query: 133 DSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL---DITKCLYD--AISRMEKAAE-QGSA 185
+ +ALQ M+ FRHLP++ ++G V IL D+ + L D ++ ++ E +G+
Sbjct: 68 NFDPNQALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLTYGKEPEEVRGTG 127
Query: 186 IAAAVEGVE 194
IA V GVE
Sbjct: 128 IACPVCGVE 136
>gi|448303595|ref|ZP_21493544.1| signal transduction protein with CBS domains [Natronorubrum
sulfidifaciens JCM 14089]
gi|445593380|gb|ELY47558.1| signal transduction protein with CBS domains [Natronorubrum
sulfidifaciens JCM 14089]
Length = 134
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V ++ S T+ T+V DA + M + +V++ D + L+GI+T D +++AE
Sbjct: 6 VARIMSSSVHTVSPDTLVEDAGKLMLEEDIGSVMVVDEDNQLAGILTTTDFV-QIVAERK 64
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYD 171
DQT VS MTR+ I VT+ +A MV+ F H PVV+ E VI +L T L
Sbjct: 65 PKDQTPVSTYMTRDVITVTAQDDIRDAADVMVEHGFHHTPVVDEDEGVIGML-TTSDLTS 123
Query: 172 AISRME 177
+SR E
Sbjct: 124 YLSRAE 129
>gi|336451598|ref|ZP_08622035.1| Putative signal-transduction protein [Idiomarina sp. A28L]
gi|336281411|gb|EGN74691.1| Putative signal-transduction protein [Idiomarina sp. A28L]
Length = 613
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 38 GESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGI 97
E + G E+T+ + K + I + A + M++ RV +L+ D + L GI
Sbjct: 136 AEQGKTQGPDWSEKTIASVITRKPIQISSTASIQSAAKLMSAERVSCLLVVD-DQQLRGI 194
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
+TD+D+ RV+A G+ D +V + +MT P + + +AL M Q HLPV+++
Sbjct: 195 LTDRDLRNRVVAVGVNFDVSVAA-VMTPMPAIIYARDSLFDALTMMGQANIHHLPVLDDN 253
Query: 158 EV 159
E+
Sbjct: 254 EI 255
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A M V AV + D L+ GI +++D+ TRV+ G+ P T V +MT P+
Sbjct: 24 VIEAVHFMVENNVGAVPVLDHGHLV-GIFSERDVMTRVVVRGMDPHSTTVETVMTPEPLA 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
V ++ + + M Q KFRHLPV E ++ L + L
Sbjct: 83 VAPETSVHDCMVLMKQHKFRHLPVCEGRRLVGFLSLRDLL 122
>gi|219850552|ref|YP_002464985.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
gi|219544811|gb|ACL26549.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
Length = 613
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ T V +A R M + R+ + L+ + + L GI+TD+D+ RV+AEGL D T V ++M+
Sbjct: 164 PDAT-VGEAARLMRAERISS-LIVEHDPL--GIITDRDLRNRVLAEGLS-DATPVRRVMS 218
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+++D+LA E L M++ HLP+V+ ++ ++ T L
Sbjct: 219 APATVISADALAFEGLLLMLERGIHHLPLVDGERMVGVVTHTDIL 263
>gi|320155965|ref|YP_004188344.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio vulnificus MO6-24/O]
gi|319931277|gb|ADV86141.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus MO6-24/O]
Length = 625
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL-----TDANALLSGIVTDKDITTRV 107
V+ L A TI + A +RMA +V ++L+ + ++GIVTD+D+ TRV
Sbjct: 152 VRTLLTRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRV 211
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+A+G P++ V S +MT I + ++ EA+ M++ HLP+++ ++ I++ T
Sbjct: 212 VAQGKSPNEAVAS-VMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPILQGDRLLGIIEAT 269
>gi|336316248|ref|ZP_08571148.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
gi|335879370|gb|EGM77269.1| Putative signal-transduction protein [Rheinheimera sp. A13L]
Length = 621
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT---DANALLSGIVTDKDITTRVIA 109
V++L A+T+ V A + M V ++L+ +A L GIVTD+D+ R+IA
Sbjct: 152 VRQLIGRAAVTLAADATVQQAAQLMQQESVSSLLIVADQSKDAALVGIVTDRDLRNRLIA 211
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
GL Q V + +MT + + EA+ M++ HLPV+E G+V+ I+ I
Sbjct: 212 AGLDYQQKV-AVVMTTELVCIEQHQFVFEAMLLMLRHNVHHLPVLEEGKVLGIISI 266
>gi|433446816|ref|ZP_20410708.1| hypothetical protein AF6_2266 [Anoxybacillus flavithermus
TNO-09.006]
gi|432000323|gb|ELK21223.1| hypothetical protein AF6_2266 [Anoxybacillus flavithermus
TNO-09.006]
Length = 143
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
TV+ + + T+ V +A + M V A+ + + N + G+VTD+DIT R A+
Sbjct: 5 HTVESIMTRQVATVTPEQSVQEAAQLMKEHNVGAIPVVE-NGKVKGMVTDRDITLRTTAK 63
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDI-T 166
GL P T VS++M+ + I T + EA + M + + R LP+V+N E ++A+ DI T
Sbjct: 64 GLTPS-TAVSQVMSSDVITGTPNMSVNEAAKVMAKNQIRRLPIVQNNELCGIVALGDIAT 122
Query: 167 KCLYD 171
YD
Sbjct: 123 NHTYD 127
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSP 282
+VA V+P V AA+ M+E + +V K++G++T +D+ +R A+ L+P
Sbjct: 14 QVATVTPEQSVQEAAQLMKEHNVGAIPVVENGKVKGMVTDRDITLRTTAKGLTP 67
>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 139
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + L A+ + E V+DA R MA ++ A+ + + L G++TD+DI +VIAEG
Sbjct: 3 TARDLMTPNAVCVRESDTVNDAARTMAREQLGALPVCGEDNRLKGMLTDRDIVVKVIAEG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P ++ + + +D E LQ M Q + R LPV++ +++ ++ D+ +
Sbjct: 63 KDPRAVHAGELAQGEAVTIGADDDVAEILQTMSQHRVRRLPVIDGHDLVGVVAQADVARA 122
Query: 169 L 169
L
Sbjct: 123 L 123
>gi|27365570|ref|NP_761098.1| signal transduction protein [Vibrio vulnificus CMCP6]
gi|27361718|gb|AAO10625.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus CMCP6]
Length = 625
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL-----TDANALLSGIVTDKDITTRV 107
V+ L A TI + A +RMA +V ++L+ + ++GIVTD+D+ TRV
Sbjct: 152 VRTLLTRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRV 211
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+A+G P++ V S +MT I + ++ EA+ M++ HLP+++ ++ I++ T
Sbjct: 212 VAQGKSPNEPVAS-VMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPILQGNRLLGIIEAT 269
>gi|254384623|ref|ZP_04999962.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343507|gb|EDX24473.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 131
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P ++ AC M+ RRV A ++ D GI+T++DI I G PD+ V T
Sbjct: 16 PAHSLRQAACL-MSGRRVGAAVVLDPEHSGIGILTERDILNS-IGAGHDPDRESVGAHTT 73
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG---EVIAILDITKCLYDA 172
N +F T ++ EA + M G FRHL V+E+G ++++ DI +C A
Sbjct: 74 NNVVFCTPEATLQEAAEAMAHGGFRHLIVLEDGGPVGIVSVRDIIRCWVPA 124
>gi|126732615|ref|ZP_01748412.1| CBS domain protein [Sagittula stellata E-37]
gi|126706899|gb|EBA05968.1| CBS domain protein [Sagittula stellata E-37]
Length = 144
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
++ +K + T+ GT V+DA + +A +R+ V+++ + GI++++DI + +
Sbjct: 4 QQILKSKGIDSVYTVKPGTKVADAAKILAEKRIGTVVISSDGVVAEGILSERDIVRVLAS 63
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DIT 166
G V MT+ + A L M +G+FRH+PVVE+G+++ ++ D+
Sbjct: 64 NGAGCLSDAVDDYMTKKLVTCARGDNADAILATMTEGRFRHMPVVEDGKMVGLITLGDVV 123
Query: 167 KCLYDAISRMEKAAEQG 183
K ++ MEK A +G
Sbjct: 124 KARLSELA-MEKTALEG 139
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV-----IAEGLRPDQTVVSKIMT 124
V +A + MA +RV A+L+ D N L GI++++D T ++ IAE LR D+ + S ++
Sbjct: 24 VIEAVKTMAEKRVGALLVLD-NGKLKGIISEQDYTRKIVLRDRIAEHLRVDEAMTSPVVC 82
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
P D +AI M + RHLPV+ GE++ ++ I + + IS + +Q
Sbjct: 83 ITPEHSIQDGMAI-----MTDKRIRHLPVMAGGELLGLVSIGDLVKEVISEQQFMIDQ 135
>gi|46198773|ref|YP_004440.1| cyclic nucleotide binding protein/CBS domain-containing proteins
[Thermus thermophilus HB27]
gi|46196396|gb|AAS80813.1| cyclic nucleotide binding protein/2 cbs domains [Thermus
thermophilus HB27]
Length = 585
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRM + + LL L GI+TD+D+ RV+AEGL P T V ++ TR
Sbjct: 157 VEEAARRMREEGISS-LLVRGEPL--GILTDRDLRNRVLAEGL-PPSTPVGQVATRPTFT 212
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+ +EA+ M++ + HLP+ EV+ ++ T L
Sbjct: 213 LPADTPLLEAVAAMLERRIHHLPLTRGEEVVGVVTHTDLL 252
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 213 ERMFKPSLSTIITENAK--VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
E++ +P L+ + E + V P+ V AA++MRE S+L+V G + GILT +D
Sbjct: 129 EKVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMRE-EGISSLLVRGEPL-GILTDRD 186
Query: 271 VLMRVVAQNLSP 282
+ RV+A+ L P
Sbjct: 187 LRNRVLAEGLPP 198
>gi|410863095|ref|YP_006978329.1| Signaling protein [Alteromonas macleodii AltDE1]
gi|410820357|gb|AFV86974.1| Signaling protein [Alteromonas macleodii AltDE1]
Length = 613
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+++ T +S A + M +++V ++L+T N L +GIVTD+D+ +RV+A L VS+
Sbjct: 157 VSVNADTSISAAAQLMTTQKVSSLLVTQNNKL-TGIVTDRDLRSRVVAASLDT-HLPVSE 214
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAI 162
IMT++P +T + +AL M + HLPV+++ ++ +
Sbjct: 215 IMTQSPAQITGNRTLFDALALMTEKNIHHLPVIDHQSLVPL 255
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+I G V A + MA + + A+L+ + ++ GI++++D +VI +T V I
Sbjct: 18 SIQPGATVYAALQLMAEKSIGALLVMEHGKIV-GILSERDYARKVILMQRTSRETFVRDI 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT ++V +D E + M Q + RHLPV+E E+I +L I + D IS EQ
Sbjct: 77 MTTAVVYVRADQTTDECMALMTQHRLRHLPVMEGDELIGMLSIGDLVKDIISEQRFIIEQ 136
>gi|358462356|ref|ZP_09172489.1| putative signal transduction protein with CBS domains [Frankia sp.
CN3]
gi|357071863|gb|EHI81434.1| putative signal transduction protein with CBS domains [Frankia sp.
CN3]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T +++ A I + DA R+M V A+ + + L GI+TD+DI R +A G
Sbjct: 4 TAREIMHQDATCIGSSQTLLDAARKMRELGVGALPICGEDDRLQGIITDRDIVVRCLAAG 63
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P T S++ P +V + + E LQ M + + R +PV++N ++ ++ D+ C
Sbjct: 64 GDPATTPASQLAQGKPFYVDASAGVDEVLQSMSEHRIRRMPVIDNRRLVGMISEADLASC 123
>gi|440231667|ref|YP_007345460.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Serratia marcescens FGI94]
gi|440053372|gb|AGB83275.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Serratia marcescens FGI94]
Length = 628
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDAN---------ALLSGIVTDKDITTRVIAE 110
K +TI V +A M++ V ++L+ +A A ++G++TD+D+ TRVIA+
Sbjct: 159 KLVTIETSGTVREAAITMSTEGVSSLLVMNAGVPEGAMGNAARMAGMLTDRDLRTRVIAK 218
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
GL D T VS+IMT I+ + EA+ M++ HLPV+ G+ I ++ + L
Sbjct: 219 GLSVD-TPVSEIMTPELIYGEHHQMVFEAMLTMMRHNVHHLPVLRQGQPIGVISQSDIL 276
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA MA ++ A+L+ N LL GI++++D ++ +G + ++ ++MT+N I
Sbjct: 25 VIDALIIMAEYKIGALLVMQKNKLL-GIISERDYAREIVLKGKSSKECLIEEVMTKNVIT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ ++ + L+ M + RHLPV+EN +V+ +L
Sbjct: 84 IDANDTYDKGLEIMTENHIRHLPVIENNKVVGML 117
>gi|55980786|ref|YP_144083.1| hypothetical protein TTHA0817 [Thermus thermophilus HB8]
gi|55772199|dbj|BAD70640.1| CBS domain protein [Thermus thermophilus HB8]
Length = 585
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRM + + LL L GI+TD+D+ RV+AEGL P T V ++ TR
Sbjct: 157 VEEAARRMREEGISS-LLVRGEPL--GILTDRDLRNRVLAEGL-PPSTPVGQVATRPTFT 212
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+ +EA+ M++ + HLP+ EV+ ++ T L
Sbjct: 213 LPADTPLLEAVAAMLERRIHHLPLTRGEEVVGVVTHTDLL 252
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 213 ERMFKPSLSTIITENAK--VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
ER+ +P L+ + E + V P+ V AA++MRE S+L+V G + GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMRE-EGISSLLVRGEPL-GILTDRD 186
Query: 271 VLMRVVAQNLSP 282
+ RV+A+ L P
Sbjct: 187 LRNRVLAEGLPP 198
>gi|146276558|ref|YP_001166717.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554799|gb|ABP69412.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Rhodobacter sphaeroides ATCC
17025]
Length = 606
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GIVT +D+T +V+A GL P T V+++MTR+PI + ++L + L M++ + HLPV+E
Sbjct: 185 GIVTTRDMTNKVVAVGLDP-STPVAEVMTRDPIALPPEALGSDILHVMLERRIGHLPVIE 243
Query: 156 NGEVIAIL---DITKCLYDAIS 174
G ++ ++ D+T+ + A+S
Sbjct: 244 EGRLVGMITQTDLTR--FQAVS 263
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K L TI +V DA R MA + + A+ + + N + G+V+++D +V+ +G
Sbjct: 10 LKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVVE-NGTVVGVVSERDYARKVVLKGR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
T VS+IM+ I V S + M RHLPVVE+G+++ +L I + +A
Sbjct: 69 SSVGTPVSEIMSSKVITVDSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEA 128
Query: 173 ISRMEKAAEQGSAI 186
I AEQ S I
Sbjct: 129 I------AEQASLI 136
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA MA +++ A+L+ D A++ G+++++D VI G +T+VS +MT +
Sbjct: 24 VYDALVLMAEKQIGALLVMDDGAMI-GLISERDYARSVILRGRTSKETLVSDVMTERVVC 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ EA+ M + + RHLPV+ +G+VI ++ I + +S + EQ
Sbjct: 83 TQPEQTLEEAMALMTEKRVRHLPVIADGKVIGLISIGDLIKSIVSEHKFIIEQ 135
>gi|309789845|ref|ZP_07684424.1| CBS domain-containing protein [Oscillochloris trichoides DG-6]
gi|308228149|gb|EFO81798.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
Length = 623
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLT-------DANALLSGIVTDKDITTRVIAEGLRPDQT 117
P+ T V +A + M+ V +L+ D + +GI TD+D+ TRV+A G+ P T
Sbjct: 167 PDAT-VQEAAQLMSQEHVSCLLIDLPPYGVLDQD---TGIFTDRDLRTRVVAAGI-PYNT 221
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
VSK+MT + +DSL E L M++ + H+P+ E+G ++ I+
Sbjct: 222 PVSKVMTTPIRTLPADSLVFEGLMAMLENRQHHMPITEHGRIVGIV 267
>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
Length = 144
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V+DA ++ R+ V+++ L GI++++DI + G+ VS+IMT
Sbjct: 23 MVTDAVTLLSQNRIGTVVVSGDGVTLDGILSERDIVRELGKRGVSCLSAPVSEIMTAKLT 82
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKAAEQG 183
T+ A LQ M +G+FRHLPV++NG +I ++ D+ K +S MEK A +G
Sbjct: 83 TCTTADSADLVLQMMTEGRFRHLPVMDNGTMIGLISIGDVVKARLSELS-MEKDALEG 139
>gi|297202261|ref|ZP_06919658.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
gi|197710222|gb|EDY54256.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
Length = 136
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTI + A M++RRV A ++ D + GI+T++DI V G PD
Sbjct: 12 LTIGPAHTLRQAAALMSARRVGAAVVLDPDGTGIGILTERDILNSV-GLGQNPDTEHAHA 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRM 176
T + +F T EA Q M G FRHL V+++GE ++++ DI +C A R+
Sbjct: 71 HTTTDVVFATPTWTLEEAAQAMAHGGFRHLIVLDHGEPTGIVSVRDIIRCWAPAPQRV 128
>gi|171186207|ref|YP_001795126.1| signal-transduction protein [Pyrobaculum neutrophilum V24Sta]
gi|170935419|gb|ACB40680.1| putative signal-transduction protein with CBS domains [Pyrobaculum
neutrophilum V24Sta]
Length = 139
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V + + +T E V + RM +V +V++ D GIVT++D+ V+A L
Sbjct: 13 VSDIMVKNVVTAKENERVREVAIRMYENKVGSVVVVDDEGRPVGIVTERDLVY-VVARAL 71
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
PD T V +MT +P+ + ++L EA++KM Q RHLPVV++
Sbjct: 72 APD-TPVWMVMTEDPVVINENALVTEAMEKMRQLDIRHLPVVDSA 115
>gi|94263436|ref|ZP_01287249.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|94270277|ref|ZP_01291697.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450869|gb|EAT01888.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93456166|gb|EAT06305.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 643
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
K TI V A RMA ++ ++L+TD+ + GIVTDKD+ T+V+A GL QT +
Sbjct: 181 KPQTIAAEATVRQAAGRMAELQIGSLLVTDSGENIIGIVTDKDLRTKVVAAGL-DYQTPL 239
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+IM + + ++ +A+ KM++ + HL V + GE++ ++
Sbjct: 240 ERIMAAPVQTIPAHAVCFDAMLKMMRRRIHHLAVEKKGEIVGMI 283
>gi|377572710|ref|ZP_09801792.1| hypothetical protein MOPEL_001_00760 [Mobilicoccus pelagius NBRC
104925]
gi|377538639|dbj|GAB46957.1| hypothetical protein MOPEL_001_00760 [Mobilicoccus pelagius NBRC
104925]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 42 SSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDK 101
S GGA V+++ + +TI V +A M + RV ++L+ D L+GI+TD+
Sbjct: 143 SDHGGAVLRTQVEEMVSGRLVTIDPARTVQEAAAAMQAERVSSLLVLDVAGRLAGILTDR 202
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
D+ RV+A L P T V+++MT +P+ + ++ A EAL +M+ HLPVV+
Sbjct: 203 DLRNRVVAAAL-PYSTTVAEVMTPDPLTLGLEAPAFEALLEMLGRGVHHLPVVDG 256
>gi|262165547|ref|ZP_06033284.1| Signal transduction protein [Vibrio mimicus VM223]
gi|262025263|gb|EEY43931.1| Signal transduction protein [Vibrio mimicus VM223]
Length = 629
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK+L A +I + + A RMA + A+L+ D L + GI+T++D+
Sbjct: 152 VKQLLTRPAPSIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
RV+A+G+ Q V S++MT I + ++ EA+ M++ HLPV+ + I I+
Sbjct: 212 CRRVLAQGIDITQAV-SQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLREKQPIGII 270
Query: 164 DIT 166
D+T
Sbjct: 271 DMT 273
>gi|254509884|ref|ZP_05121951.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
gi|221533595|gb|EEE36583.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
Length = 145
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLT-DANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
+T+ VS A +A+RR+ V+++ D GI++++DI + A G VS
Sbjct: 16 VTVEPSATVSQAAEILATRRIGTVIISEDGGQTALGILSERDIVRELAASGSGCLGKPVS 75
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEK 178
MTR+ + T L +M +G+FRH+PVVE+G++I I+ + + ++ MEK
Sbjct: 76 AYMTRDLVTATQQDSVEAILSRMTEGRFRHMPVVEDGKLIGIVTLGDAVKAQLAELAMEK 135
Query: 179 AAEQG 183
A +G
Sbjct: 136 NALEG 140
>gi|315427107|dbj|BAJ48722.1| hypothetical protein HGMM_F05B08C03 [Candidatus Caldiarchaeum
subterraneum]
Length = 296
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S +++ EG+ V +A + MA R++ +++T+ + G+VT++DI ++V+A G P +T
Sbjct: 4 SPLISVEEGSSVIEAAKVMAERKISGIVITNKGKPV-GLVTERDIVSKVVAAGKDPSRTS 62
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
V ++M++ I + ++ +EA+ M + K R L V + EVI + I L A+SR+
Sbjct: 63 VKEVMSKPLITIDIEATLLEAVDLMNRKKVRRLLVTRDDEVIGLFTIRDVL--ALSRI 118
>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 121
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
++DA +A RR+ A+ + D A ++GI +++D+ + G + V +MT I
Sbjct: 1 MADAVELLAERRIGALPVEDVGAEVAGIFSERDVLYSLQTNGADILRRKVRDVMTTPVIT 60
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+ D +EAL M Q + RHLPV+E+G +IA + I + I R+E A+
Sbjct: 61 ASPDQSVLEALALMTQRRIRHLPVMEDGRMIAFISIGDLVKYRIERIEAEAD 112
>gi|335043357|ref|ZP_08536384.1| CBS-domain-containing membrane protein [Methylophaga
aminisulfidivorans MP]
gi|333789971|gb|EGL55853.1| CBS-domain-containing membrane protein [Methylophaga
aminisulfidivorans MP]
Length = 150
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + R+ ++++T+AN + GI++++DI + + +Q +V+ MT NP
Sbjct: 26 AVAMLMEHRIGSLIITEANGTMVGILSERDILKILDTHPEQWNQMLVNDAMTPNPYTCEP 85
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR 175
D+ E + KMV+ RHLPVV G++ +L IT + + + +
Sbjct: 86 DNTLEEVMNKMVEHNIRHLPVVYKGKLEGMLSITDIVEELLKK 128
>gi|406914008|gb|EKD53271.1| signal-transduction protein [uncultured bacterium]
Length = 146
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+T+ GT V DA + + A+ + D + +L GI++++D+ V+A P V
Sbjct: 16 NVVTVSPGTSVVDAAFILRHNNIGALPVMD-DGVLVGIISERDMVFDVLANRTDPATIAV 74
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
+ MT++P VT + ++ ++ M + K RH+PVV+NG ++ I+ + LY E
Sbjct: 75 ADCMTKDPACVTPFTDIMDCMKLMEEMKVRHIPVVDNGLLVGIVSLRDILYVLWKNQELL 134
Query: 180 AEQ 182
A+Q
Sbjct: 135 AQQ 137
>gi|385805156|ref|YP_005841554.1| putative signal transduction protein [Fervidicoccus fontis Kam940]
gi|383795019|gb|AFH42102.1| putative signal transduction protein with CBS domains
[Fervidicoccus fontis Kam940]
Length = 140
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 49 GERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI 108
G T++ + S + + + T V +A R M + R+ +VL+ + + L GI+T++D+ V
Sbjct: 6 GNFTIESIMSSPPVVVHKETSVHEAARIMFNNRIGSVLVVEDDGRLIGILTERDLVYLVA 65
Query: 109 AEGLR-PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDIT 166
++ L + V +MT NPI V ++ +AL KM + RHLPVV + G+ I I+ +
Sbjct: 66 SDKLHTASEMKVWHLMTENPITVKANETIGDALSKMKEVNIRHLPVVNDEGKPIGIVSMR 125
Query: 167 KCLYDAISRME 177
L IS ++
Sbjct: 126 DILDYIISFLD 136
>gi|393720647|ref|ZP_10340574.1| signal-transduction protein [Sphingomonas echinoides ATCC 14820]
Length = 142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA +A+RRV AV + + N ++ GI +++D+ + A G V MT PI
Sbjct: 23 VGDAVAVLATRRVGAVPVMEGNRVV-GIFSERDVIHAIHAYGADAMARSVGDTMTAPPIT 81
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
VT I AL M + + RHLPVVE VI + I + I R+E AE
Sbjct: 82 VTPGEAVIGALSLMTRRRIRHLPVVEGDRVIGFVSIGDLVKYRIDRIEADAE 133
>gi|225174297|ref|ZP_03728296.1| putative signal transduction protein with CBS domains [Dethiobacter
alkaliphilus AHT 1]
gi|225170082|gb|EEG78877.1| putative signal transduction protein with CBS domains [Dethiobacter
alkaliphilus AHT 1]
Length = 146
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+T+ ++ +++ V +A + M + + + D N L GIVTD+DIT R A
Sbjct: 3 QTIGQIMTKNVVSVSSQQTVQEAAQLMKQHNIGVIPVVD-NGQLKGIVTDRDITIRSTAG 61
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
G+ + T VS+ M+ + F TS+ E M Q + R LPVVEN +++ ++ I
Sbjct: 62 GVNAN-TPVSQCMSTDVKFATSNMDVHEVANLMSQHQIRRLPVVENNQLVGMVAIGDLAE 120
Query: 171 DAISRME 177
++I + E
Sbjct: 121 ESIYKNE 127
>gi|414162088|ref|ZP_11418335.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
gi|410879868|gb|EKS27708.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
Length = 142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+SDA R + R + AVL+ + + + GI++++D+ + G VS++MTR +
Sbjct: 23 MSDAIRMLTERHIGAVLVMNGHHI-DGILSERDVVRVLGQRGASVLDAPVSEVMTRKVVT 81
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
A ++KM GKFRHLPVVEN V+ ++ I + + E+ E
Sbjct: 82 CRRADTAALIMEKMTNGKFRHLPVVENDRVVGLISIGDIVKWRVKEYEREQE 133
>gi|172040445|ref|YP_001800159.1| hypothetical protein cur_0765 [Corynebacterium urealyticum DSM
7109]
gi|171851749|emb|CAQ04725.1| hypothetical protein cu0765 [Corynebacterium urealyticum DSM 7109]
Length = 620
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE--GLRPDQTVVSKIMTR 125
T + DA RM V ++L+ D + L GI+TD+D+ V AE G P VS+ MT
Sbjct: 172 TTLRDAAIRMGEFNVSSLLVID-DRELRGIITDRDMRRSVAAEISGDSP----VSEAMTA 226
Query: 126 NPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV---IAILDITKCL 169
NPI + D+L EA+ M + H+PVV++G V IA DI + +
Sbjct: 227 NPISLGPDALVFEAMLLMAERGIHHIPVVDDGRVAGIIAAADIMRLM 273
>gi|406936799|gb|EKD70436.1| arabinose-5-phosphate isomerase, partial [uncultured bacterium]
Length = 254
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 45 GGAGGER---TVKKLRLSKAL--TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVT 99
GGA G++ TV +L S+ +PE ++S+A M + + + +A LSGI T
Sbjct: 120 GGALGKKLLLTVNELMYSQNQLPCVPEYCLLSEALIEMTQKSLGMTTVVNAEDKLSGIFT 179
Query: 100 DKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV 159
D D+ R I + L QT +S +MT+N I ++ D LA +AL+ M + K L VVE +
Sbjct: 180 DGDLR-RTIDQNLDIHQTPISSVMTKNCITISKDMLASKALEIMKERKITSLVVVEKNKP 238
Query: 160 IAILDITKCLYDAIS 174
I ++ + L I+
Sbjct: 239 IGVVHLHALLQAGIA 253
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 86 LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
++ D+ AL+ G+VTD+DI R +A+G DQ V ++MT +P+ VT+D+ E KM
Sbjct: 37 VVDDSGALV-GVVTDRDIACRCVAKGKSSDQR-VEEVMTSSPVTVTADASVDECCTKMED 94
Query: 146 GKFRHLPVVEN-GEVIAIL 163
+ R LPVV++ G+ I+
Sbjct: 95 NQVRRLPVVDDKGKCCGIV 113
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TI +V DA +RMA +++ A+++T+ N + GIVT++D +++ T V
Sbjct: 56 YTIDASALVYDAMKRMAEKQIGALVVTE-NGKIVGIVTERDYARKIVLMDRSSKATAVRD 114
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
IMTR+ +V + A + + + + RHLPV++ G ++ ++ I + IS
Sbjct: 115 IMTRDVRYVRPEDSAQGCMALVTEHRMRHLPVIDGGRLVGMISIGDLVKHIIS 167
>gi|56696685|ref|YP_167046.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56678422|gb|AAV95088.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Ruegeria pomeroyi DSS-3]
Length = 607
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N ++ P PQ +S ++ V+ L T T V A + M +R + ++ +
Sbjct: 127 NRARAPRPQVQSLAT-------SRVETLMARDPATCAPDTTVQAAAQEMRARSISSLCVC 179
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
+ AL+ GI+T +D++ +V+AE PD T V ++MT P+ + ++ + L M++
Sbjct: 180 EDGALV-GILTQRDLSGKVVAEARSPD-TPVDQVMTPAPLTLAPSAIGSDVLHAMMERHI 237
Query: 149 RHLPVVENGEVIAIL---DITKCLYDAISRMEKAAEQGSAIAAA 189
H+P+VE G ++ ++ D+T+ + A+S E + A +AA
Sbjct: 238 GHIPIVEAGRLVGMVTQTDLTR--FQAVSSAELVSRLARATSAA 279
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + VT
Sbjct: 22 RLMAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSD 80
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 81 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 121
>gi|37680284|ref|NP_934893.1| signal-transduction protein [Vibrio vulnificus YJ016]
gi|37199031|dbj|BAC94864.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
Length = 625
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL-----TDANALLSGIVTDKDITTRV 107
V+ L A TI + A +RMA +V ++L+ + ++GIVTD+D+ TRV
Sbjct: 152 VRTLLNRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRV 211
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+A+G P++ V S +MT I + ++ EA+ M++ HLP+++ ++ I++ T
Sbjct: 212 VAQGKSPNEAVAS-VMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPILQGDRLLGIIEAT 269
>gi|392545560|ref|ZP_10292697.1| hypothetical protein PrubA2_04272 [Pseudoalteromonas rubra ATCC
29570]
Length = 631
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 15/129 (11%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L L + +++ + DA + M +V A+L+ D + +S GI++DK
Sbjct: 152 VKTLLLRELVSVELTRSIRDAAKLMTEEQVSALLIYDPSKPVSDDPEDDDGQIVGILSDK 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE--- 158
D+ +V+AE L +Q V + IMTR V S++ EA+ M++ HLPVV
Sbjct: 212 DLRIKVVAEDLDTNQPVAT-IMTRELTIVDSNAYVFEAMMMMLRDNLHHLPVVHKRRPIG 270
Query: 159 VIAILDITK 167
VIA+ DI +
Sbjct: 271 VIALSDILR 279
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ ++ + A +A + A+L+ D L+ G+V+++D T +V +G +T V++IMT
Sbjct: 20 PDDSVYA-ALELLAEHEIGALLVMDGGRLV-GVVSERDYTRKVALQGRNSRETKVAEIMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
R + V SD+ E + M + + RHLPVV+ V+ ++ I L + I+ E+
Sbjct: 78 REVVRVQSDAPMHECMALMSEHRIRHLPVVDGATVLGMISIRDLLDELIAEQER 131
>gi|260777449|ref|ZP_05886343.1| Signal transduction protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607115|gb|EEX33389.1| Signal transduction protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 629
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
V+ L A + + + +A +MA V ++L+ D + L L GI+TD+D+
Sbjct: 152 VRTLLTGDAPFLEKTETIQNAAIKMAEENVSSLLIIDPDILEDNEEDNSPLVGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEGL + VS +MT I + ++ EA+ M++ HLPV+++ + I I+
Sbjct: 212 CTRVLAEGLDANDE-VSSVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDKKPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 51 RTVKKLRLSK----ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
+TV +L +K TI +V DA R MA + V A+ + D N + G+V+++D +
Sbjct: 2 KTVAQLLHAKQSQQVHTIGPHEMVLDALRVMAVKNVGALPVVD-NGQVVGVVSERDYARK 60
Query: 107 VIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+I +G T VS IM+ + V S + M + RHLPVVENG+++ +L I
Sbjct: 61 MILQGRSSVGTPVSAIMSSPVVTVDSQQNVDTCMSIMTERHLRHLPVVENGQLVGLLSIG 120
Query: 167 KCLYDAISRMEKAAEQ 182
+ +AI+ + +Q
Sbjct: 121 DLVKEAIAEQAQLIQQ 136
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+IP G V A + MA + + A+L+ + ++ GI++++D +VI +T V I
Sbjct: 18 SIPPGATVYAALQLMAEKGIGALLVIERGDIV-GILSERDYARKVILMSRTSRETFVRDI 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT I+V D E + M Q + RHLPV++ ++I +L I + D IS EQ
Sbjct: 77 MTSAVIYVRGDQSTDECMALMTQHRMRHLPVMDGDQLIGMLSIGDLVKDIISEQRFIIEQ 136
>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
Length = 144
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ G ++S+A + ++ +R+ +++ GI++++DI + +G V +
Sbjct: 17 TVKPGVLISEAAKMLSEKRIGTLVICSDGKTPDGILSERDIVRALGVQGDACLNMTVESL 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKA 179
MT+ + +D+ + E L KM +G+FRH+PV+ +G ++ ++ D+ K +S MEK
Sbjct: 77 MTKELVTCGTDARSDEILTKMTEGRFRHMPVLADGALVGLISLGDVVKAQLMELS-MEKD 135
Query: 180 AEQG 183
A QG
Sbjct: 136 ALQG 139
>gi|345008466|ref|YP_004810820.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344034815|gb|AEM80540.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
Length = 139
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
A IPE V A + M V A+ ++D+N L GIVTD+DI IAE P +T V
Sbjct: 12 AQWIPENESVLRAAQMMRDLGVGALPVSDSNERLCGIVTDRDIVVGCIAENCDPSRTPVG 71
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
++ P ++ +D+ + L++M + K R LPV++
Sbjct: 72 QLTEGTPRWIPADADVTDVLREMEEHKIRRLPVID 106
>gi|407983659|ref|ZP_11164307.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
gi|407374771|gb|EKF23739.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
Length = 272
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T++ +A R + + R+ AV + L+ GI TD+D+T R + GL P T +S++MT
Sbjct: 5 PNDTVL-EAARAIEANRIGAVAVQKDRRLV-GIATDRDLTVRALGRGLDPSSTTISEVMT 62
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
+P+ ++ +A++ M + R +P+VE+G ++ ++ + + + + +E+ A
Sbjct: 63 PSPLTLSPRDSVDDAIRLMKERNIRRIPLVEDGRIVGMVTLDDLILEEAAPLEELA 118
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A R MA + V AVL+ + L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 3 EAIRLMAEKAVGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVTVS 61
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 62 PSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 105
>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
Length = 168
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+ LT T + DA M+ + AV++ D + + G+VT++D+ +++A L +T V
Sbjct: 11 RPLTCSPDTSIFDAVTSMSEKNFGAVIVVDPDKKVLGVVTERDVMNKLVALELDARKTAV 70
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
S IMT++P + ++ L+ M +FR LPVV +NG++ A+
Sbjct: 71 SDIMTKDPRVASESDDMLDWLRIMSNERFRRLPVVDDNGQIKAVF 115
>gi|323144275|ref|ZP_08078897.1| CBS domain protein [Succinatimonas hippei YIT 12066]
gi|322415945|gb|EFY06657.1| CBS domain protein [Succinatimonas hippei YIT 12066]
Length = 620
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 38 GESSSSVGGAGGERTVKKLRLSK-ALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSG 96
+ S+ + R V L+ AL P+ TI A + + + + + D N L+ G
Sbjct: 142 ANNKSAAANSHFSRPVSDFYLNDCALVSPKSTIRQTA-QEIGLKHAECAFIVDNNKLI-G 199
Query: 97 IVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
+VT DIT R +A G+ P + V S IM++NP+ + +L+ M++ + LPV++
Sbjct: 200 VVTKSDITLRAVAAGVDPSEEV-SAIMSKNPVTINLTDPLYHSLELMIEHNIKVLPVIDR 258
Query: 157 GEVIAILDITKCL 169
G+++ I+ ++ L
Sbjct: 259 GQIVGIITASQLL 271
>gi|393762079|ref|ZP_10350708.1| hypothetical protein AGRI_03834 [Alishewanella agri BL06]
gi|392607111|gb|EIW89993.1| hypothetical protein AGRI_03834 [Alishewanella agri BL06]
Length = 606
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A + M +RV + LL + + L+GI+TD+D+ TRV+A L P T V ++MT P
Sbjct: 161 VQQAAQLMTEKRVSS-LLVEQDERLTGILTDRDLRTRVLAANL-PATTPVQQVMTPKPHT 218
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENG 157
+ + EA+Q M + HLPV+E G
Sbjct: 219 IDKHAYLFEAVQLMSRFNIHHLPVLEQG 246
>gi|288554372|ref|YP_003426307.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Bacillus pseudofirmus OF4]
gi|288545532|gb|ADC49415.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Bacillus pseudofirmus OF4]
Length = 642
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 85 VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMV 144
V+L D + L+ GI+T+KD+ RV+A G P V ++MT NP + D+ EA+ +
Sbjct: 207 VVLNDGDQLI-GIITEKDLVARVVANGGGPG-IVAKEVMTANPFIIADDAFYYEAMSSFL 264
Query: 145 QGKFRHLPVVENGEVIAILDITKCL 169
+HLPV+ G V+ + ++ L
Sbjct: 265 MNGIKHLPVMRRGRVVGMCTLSDLL 289
>gi|118431896|ref|NP_148644.2| hypothetical protein APE_2489.1 [Aeropyrum pernix K1]
gi|116063219|dbj|BAA81505.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 148
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+++ +T+ V+ A + M + +VL+ D L GIVT++DI V++E P +
Sbjct: 20 ITEVVTVKPDDPVTRAAKLMVENLIGSVLVVDDEGRLRGIVTERDIVY-VVSEAWDPTKH 78
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
V +IMT NPI V D + ++KM + RHLPVV E G + I+ L
Sbjct: 79 RVWEIMTENPIVVRPDDDLLTVVRKMSETNVRHLPVVDEKGAPVGIISFRDVL 131
>gi|343512822|ref|ZP_08749939.1| hypothetical protein VIS19158_07100 [Vibrio scophthalmi LMG 19158]
gi|342794510|gb|EGU30275.1| hypothetical protein VIS19158_07100 [Vibrio scophthalmi LMG 19158]
Length = 629
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 70 VSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDITTRVIAEGLRPDQTVVS 120
+ +A +MA V ++L+ D + L GI+TD+D+ TRV+A+GL P V S
Sbjct: 169 IQNAAIKMAEENVSSLLIIDPDIAQNDDDDGSGLVGIITDRDLCTRVLAQGLNPHDAVAS 228
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
+MT I + ++ EA+ M++ HLPV+++ + I I++ T
Sbjct: 229 -VMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVLKDRQPIGIIETT 273
>gi|289580323|ref|YP_003478789.1| signal transduction protein with CBS domains [Natrialba magadii
ATCC 43099]
gi|448283993|ref|ZP_21475258.1| signal transduction protein with CBS domains [Natrialba magadii
ATCC 43099]
gi|289529876|gb|ADD04227.1| putative signal transduction protein with CBS domains [Natrialba
magadii ATCC 43099]
gi|445572088|gb|ELY26630.1| signal transduction protein with CBS domains [Natrialba magadii
ATCC 43099]
Length = 140
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
++ L S +T E V + RM V +V++TD + + GIVTD+D+ TRV+ +G+
Sbjct: 3 IESLARSDVVTAHEDESVQELATRMDESHVGSVVITDGDEPI-GIVTDRDLATRVLGDGM 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL---DITKC 168
P +T S +M+ N V + EA + M + R LPV ++ E++ I+ D+ +
Sbjct: 62 DPAETTASDVMSDNITTVDQTAGFYEATELMSEHGIRRLPVCDDSNELVGIITADDLNEL 121
Query: 169 LYD 171
L D
Sbjct: 122 LAD 124
>gi|417969647|ref|ZP_12610585.1| signal transduction protein [Corynebacterium glutamicum S9114]
gi|344046060|gb|EGV41727.1| signal transduction protein [Corynebacterium glutamicum S9114]
Length = 622
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRP 114
+ +++ ++ T + DA +M V + LL + L GI+TD+D+ +RV+A+ L
Sbjct: 159 EFKIANPISCSPDTTIMDAAIKMDEFGVSS-LLVQIDGELKGIITDRDMRSRVVAKDLDI 217
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCL-Y 170
Q V+++MT +P TS LA EA+ M + + +LP+V++G++ I+ DI + L +
Sbjct: 218 -QLPVTEVMTVDPRCATSQGLAFEAMLLMSELRIHYLPIVDDGQISGIVTAADIMRLLRH 276
Query: 171 DAI 173
D I
Sbjct: 277 DPI 279
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
SP + AA KM EF +S L+ +++GI+T +D+ RVVA++L +L + E
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLVQIDGELKGIITDRDMRSRVVAKDLDIQLPVTE 223
>gi|315427075|dbj|BAJ48691.1| hypothetical protein HGMM_F40F12C16 [Candidatus Caldiarchaeum
subterraneum]
gi|315428139|dbj|BAJ49725.1| hypothetical protein HGMM_F28H09C27 [Candidatus Caldiarchaeum
subterraneum]
gi|343485740|dbj|BAJ51394.1| hypothetical protein CSUB_C1543 [Candidatus Caldiarchaeum
subterraneum]
Length = 192
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
VK + S +++ EG+ V +A + MA R++ +++T+ + G+VT++DI ++V+A G
Sbjct: 7 VKDVVKSPLISVEEGSSVIEAAKVMAERKISGIVITNKGKPV-GLVTERDIVSKVVAAGK 65
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P +T V ++M++ I + ++ +EA+ M + K R L V + EVI + I L A
Sbjct: 66 DPSRTSVKEVMSKPLITIDIEATLLEAVDLMNRKKVRRLLVTRDDEVIGLFTIRDVL--A 123
Query: 173 ISRM 176
+SR+
Sbjct: 124 LSRI 127
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
++P V A + MA + + A+L+ + +L GI++++D +VI +T+V I
Sbjct: 18 SVPPTATVYTALQLMAEKGIGALLVIEHGEIL-GILSERDYARKVILMQRTSRETLVRDI 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT I+V + E + M + + RHLPV+E E+I +L I + D IS + EQ
Sbjct: 77 MTNAVIYVGASQTTDECMALMTRHRLRHLPVMEGDELIGMLSIGDLVKDIISEQQFIIEQ 136
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + VT
Sbjct: 29 RLMAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSD 87
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 88 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ +
Sbjct: 10 VIEAIRLMADKSIGAVLVMEGERLV-GIVSERDYARKVVLRDRSSSSTSVAEIMSHAVVT 68
Query: 130 VT-SDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISR 175
V+ +DS+ +Q M G+FRHLPVV+NG VI+I D+ K + +A R
Sbjct: 69 VSPADSVE-HCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQR 117
>gi|414153969|ref|ZP_11410290.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454501|emb|CCO08194.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 144
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
++ +K++ + T+ V +A + M+ V +V + D N GIVTD+DI R ++
Sbjct: 2 KQQLKEIMTPQVATVSPQQTVQEAAQLMSQYNVGSVPVVD-NGRCVGIVTDRDIALRAVS 60
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI---- 165
+G P T V +MT + T EA M Q + R LPVVENG + I+ +
Sbjct: 61 QGHNPSTTKVQTVMTAGVVTGTPQMDVHEAANLMAQRQIRRLPVVENGRLAGIVSLGDLA 120
Query: 166 TKCLY 170
T+ +Y
Sbjct: 121 TQNIY 125
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 216 FKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRV 275
K L I+T +VA VSP V AA+ M ++ S +V + GI+T +D+ +R
Sbjct: 1 MKQQLKEIMT--PQVATVSPQQTVQEAAQLMSQYNVGSVPVVDNGRCVGIVTDRDIALRA 58
Query: 276 VAQNLSPELTLVERFI 291
V+Q +P T V+ +
Sbjct: 59 VSQGHNPSTTKVQTVM 74
>gi|92113106|ref|YP_573034.1| cyclic nucleotide-binding domain-containing protein
[Chromohalobacter salexigens DSM 3043]
gi|91796196|gb|ABE58335.1| cyclic nucleotide-binding domain (cNMP-BD) protein
[Chromohalobacter salexigens DSM 3043]
Length = 635
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 24 SENGGNLSKPPSPQGESSSSVGGAGGERTVKKLR--LSKA-LTIPEGTIVSDACRRMASR 80
EN + + P+ E++ G E V K+R S+A + + V +A + M
Sbjct: 119 DENFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPVMVESDATVQEAAQHMGEH 178
Query: 81 RVDAVLL-------TDANAL---------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
+VL+ D++A + GI+TD D+ RV+AEGL P T V +++
Sbjct: 179 NASSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGL-PASTQVGQLID 237
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
PI + SD EA+ +M++ HLPV+ I +L ++
Sbjct: 238 DRPITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLS 279
>gi|448312966|ref|ZP_21502698.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
gi|445599812|gb|ELY53836.1| signal transduction protein with CBS domains [Natronolimnobius
innermongolicus JCM 12255]
Length = 134
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V ++ S ++ T+V DA M + +V++TD N L GI+T D R++AE
Sbjct: 6 VARIMSSTVHSVESETLVEDAAGSMLDNEIGSVVVTDENNHLEGILTTTDFV-RIVAERK 64
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
DQT V + M+ + I V++ +A MV F HLPVV+ E + + T L
Sbjct: 65 PKDQTPVERYMSEDVITVSAQDGIRDAADVMVDHGFHHLPVVDEDEGVIGMITTSDLASY 124
Query: 173 ISRME 177
+SR E
Sbjct: 125 LSREE 129
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 51 RTVKKL---RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
+TV++L + + ++ V +A R MA + + AVL+ + L+ GIV+++D +V
Sbjct: 2 QTVRQLLGMKQVEVFSVAADAAVIEAIRLMADKSIGAVLVMEGERLV-GIVSERDYARKV 60
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVT-SDSLAIEALQKMVQGKFRHLPVVENGE---VIAIL 163
+ T V++IM+ + V+ +DS+ +Q M G+FRHLPVV+NG VI+I
Sbjct: 61 VLRDRSSSSTSVAEIMSHAVVTVSPADSVE-HCMQLMTDGRFRHLPVVDNGRVQGVISIG 119
Query: 164 DITKCLYDA 172
D+ K + +A
Sbjct: 120 DLVKAVIEA 128
>gi|408826492|ref|ZP_11211382.1| oxidoreductase [Streptomyces somaliensis DSM 40738]
Length = 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ ++V +A R M ++ V VL+ D + L+ G+VTD+DIT R +AEG P + T
Sbjct: 18 PDASLV-EAARLMRAQDVGDVLVADGDRLV-GVVTDRDITVRAVAEGADPLTVSAGAVCT 75
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+P+ V D A++ M + R LPVVE+G + ++
Sbjct: 76 PDPVCVGPDDEVATAVRLMRRHAVRRLPVVEDGRPLGVV 114
>gi|374576351|ref|ZP_09649447.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374424672|gb|EHR04205.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTVVSKIMTRNPIFVT 131
A + + +++ AVL+ + + L GI++++DI RVI E G + VS++MTR +
Sbjct: 26 AVKLLGEKKIGAVLVMN-QSRLEGILSERDIV-RVIGERGAGALEEPVSQVMTRKVVTCK 83
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
E ++ M GKFRHLPVV+NG+V+ ++ I
Sbjct: 84 ETDTVAELMEMMTTGKFRHLPVVDNGKVVGLISI 117
>gi|358635061|dbj|BAL22358.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 144
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ G+ + ++ M R AVL+ + LL GIVT++DI RV++ GL P T V +
Sbjct: 17 TVSPGSTIRNSSIIMREMRSSAVLVVEKGMLL-GIVTERDIVFRVVSLGLDPAATSVESV 75
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
MT + + D AL M +G FRH+PVV +NG + +L
Sbjct: 76 MTTSVQTIHEDKPFGHALHLMYEGGFRHMPVVDDNGIPVGLL 117
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 233 VSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
VSP + ++ MRE RS++ L+V + GI+T +D++ RVV+ L P T VE
Sbjct: 18 VSPGSTIRNSSIIMREMRSSAVLVVEKGMLLGIVTERDIVFRVVSLGLDPAATSVE 73
>gi|320583158|gb|EFW97374.1| Nuclear polyadenylated RNA-binding protein [Ogataea parapolymorpha
DL-1]
Length = 875
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD---ANALLS---GIVTDKDITTRVIA 109
L +S L I T V DA + + V A+L+ + A A S GI+T KD+ RV+A
Sbjct: 89 LEMSPPLLIGTKTSVLDAVNLLKEKNVTALLVCESPSAPAHCSHIIGILTSKDVAFRVLA 148
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIE-ALQKMVQGKFRHLPVVE-NGEVIAILDITK 167
+ P T ++++MT P F ++L I AL+ M +GKF +LP+ + NG V ++ + +
Sbjct: 149 SHIDPKSTSIARVMTLRPNFA-DETLEIHTALRLMFEGKFLNLPIKDSNGYVTGLVSVLQ 207
Query: 168 CLYDAISRMEKAAE--------QGSAIAAAVEG--VERQWGS 199
Y + ++ + E ++I + G R WGS
Sbjct: 208 LTYALLKTLDGSTETTEDLLEADNTSINSLDNGPAWNRFWGS 249
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 70 VSDACRRMASRRVDAVLL--TDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V DA + M V A+++ +DAN ++GI+T++D ++I +G T V IMT
Sbjct: 80 VYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
Query: 128 --IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
I VT D+ ++A+Q M + RH+PV++ +I ++ I + + + E+ +A
Sbjct: 140 KLITVTPDTKVLQAMQLMTDNRIRHIPVIDEKGMIGMVSIGDVVRAVVREHRQEVERLNA 199
Query: 186 IAAAV 190
V
Sbjct: 200 FIQVV 204
>gi|239947699|ref|ZP_04699452.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921975|gb|EER21999.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 319
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT---VVS 120
+ E T ++ M +R+ L+TD N L GI+TD D+ + DQ + S
Sbjct: 212 VYEDTSFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGDLRRHI------NDQIYLKIAS 265
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
IMT+NPI ++S+ A EAL M ++P+V+N +I I+ I L
Sbjct: 266 SIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDNNVIIGIIHIHDLL 314
>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
Length = 147
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + T+ V +A + M+ + + A+ + + N + G++TD+DIT R A+G
Sbjct: 8 VQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPVVE-NGQVKGMITDRDITLRTSAQGK 66
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
P T VS+IMT + T + EA M Q + R LP+VEN ++ I+
Sbjct: 67 DPASTPVSEIMTNRVVTGTPNMSVQEAASVMAQHQIRRLPIVENNQIQGIV 117
>gi|448357877|ref|ZP_21546572.1| signal transduction protein with CBS domains [Natrialba
chahannaoensis JCM 10990]
gi|445648185|gb|ELZ01147.1| signal transduction protein with CBS domains [Natrialba
chahannaoensis JCM 10990]
Length = 140
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
++ L S +T E V + RM V +V++TD + + GIVTD+D+ TRV+ +G+
Sbjct: 3 IESLARSDVVTAHEDESVQELATRMDKSHVGSVVITDGDEPI-GIVTDRDLATRVLGDGM 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL---DITKC 168
P +T S +M+ N V + EA + M + R LPV ++ E++ I+ D+ +
Sbjct: 62 DPAETTASDVMSDNITTVDQTAGFYEATELMSEHGIRRLPVCDDSNELVGIITADDLNEL 121
Query: 169 LYD 171
L D
Sbjct: 122 LAD 124
>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
gi|448236783|ref|YP_007400841.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
gi|445205625|gb|AGE21090.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
Length = 148
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + TI V +A + M+ + + A+ + + N + G++TD+DIT RV ++G
Sbjct: 9 VQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVVE-NGQVKGMITDRDITLRVSSQGK 67
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P V+++MT + T + EA M Q + R LP+VEN ++ I+ + ++
Sbjct: 68 DPSTVKVAEVMTNQVVTGTPNMSVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNS 127
Query: 173 ISRMEKAAEQ 182
S +AAEQ
Sbjct: 128 ASN--EAAEQ 135
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%)
Query: 71 SDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFV 130
+DA R +A ++ AV++T A ++GI++++DI + + G + IMT
Sbjct: 24 ADAVRFLADNKIGAVVVTGAGGKIAGILSERDIVRAIASRGADALSAPIYDIMTSKVTTC 83
Query: 131 TSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAA 189
+ ++ M +G+FRHLPV +G++I I+ I + I +E+ AE+ A A+
Sbjct: 84 GESHTVNQVMELMTKGRFRHLPVEADGKLIGIISIGDVVRRRIEDVEREAEEIKAYIAS 142
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI V DA + MA + + A+++T+ +++ GI T++D ++ G T V +
Sbjct: 18 TISPAASVLDALQLMADKGIGALIVTEGASIV-GIFTERDYARKIALMGRTSAVTQVKDV 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT +FV D + + +Q M + RHLPVV+ G+++ ++ I + D IS + EQ
Sbjct: 77 MTSAVMFVRPDQTSEQCMQLMSNNRLRHLPVVDGGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|383761964|ref|YP_005440946.1| hypothetical protein CLDAP_10090 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382232|dbj|BAL99048.1| hypothetical protein CLDAP_10090 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 599
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 40 SSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVT 99
S S+ G K L + + + + V +A MA + +VL+ D GI+T
Sbjct: 133 SEQSLNAQGLGMPSKYLVVHEPIFVAPDATVQEAASVMAKAGIGSVLVADEP---PGILT 189
Query: 100 DKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEV 159
D+D+ RV+A G P+ T V ++M+R I + SD+ A+ +M++ K HL +VE G++
Sbjct: 190 DRDLRNRVLAAGRGPE-TPVREVMSRPLIAIDSDTPVHGAMMRMLEEKIHHLALVEEGKI 248
Query: 160 IAILDITKCL 169
+ ++ T +
Sbjct: 249 VGLISSTDLM 258
>gi|452955368|gb|EME60766.1| signal transduction protein [Amycolatopsis decaplanina DSM 44594]
Length = 138
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + + A + V DA ++MA+ V AV + + L G++TD+DI +V+AEG
Sbjct: 3 TARDIMTANATCVSASETVLDAAKKMAAESVGAVPICGEDGKLKGMLTDRDIVVKVLAEG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P S++ + + +D A E ++ M K R LPV++ +++ I+ D+ K
Sbjct: 63 KDPRALHASELAQGEAVTIGADDDAEEIMRTMANHKVRRLPVIDGHKLVGIVAQADVAKA 122
Query: 169 L 169
L
Sbjct: 123 L 123
>gi|188996634|ref|YP_001930885.1| signal-transduction protein with CBS domains [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931701|gb|ACD66331.1| putative signal-transduction protein with CBS domains
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 140
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
++K + + ++I + + + MASR V +V++ + + GI+TD+DI R++ +G
Sbjct: 2 SIKSISRKEFISISQDASIKEVAGIMASRNVGSVVVVEDGKPV-GILTDRDIVVRLVNKG 60
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLY 170
+ P + VS++MT++PI + D EAL+ + Q R PVV+ +G++ I+ + +Y
Sbjct: 61 INPSEVKVSELMTKDPICLQEDLGIFEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIVY 120
>gi|410640788|ref|ZP_11351318.1| CBS domain-containing protein [Glaciecola chathamensis S18K6]
gi|410648146|ref|ZP_11358560.1| CBS domain-containing protein [Glaciecola agarilytica NO2]
gi|410132165|dbj|GAC06959.1| CBS domain-containing protein [Glaciecola agarilytica NO2]
gi|410139816|dbj|GAC09505.1| CBS domain-containing protein [Glaciecola chathamensis S18K6]
Length = 636
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 32 KPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLL---- 87
+ PSP + + S+ A E+ + +L L +P T V +A RM V +VL+
Sbjct: 135 RDPSPDKKDNDSLLTAKVEKLIGQL----PLILPPNTSVQEAALRMTEEGVSSVLISNEQ 190
Query: 88 --------------TDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSD 133
TD ++ GIVTD DI +R++A+GL T V+ IMT V S+
Sbjct: 191 VPNNQVSTENNDDETDDEPVI-GIVTDVDIRSRLVAQGLDL-STPVTDIMTSQLNTVQSN 248
Query: 134 SLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
EA+ M++ K HLPV++N I ++
Sbjct: 249 QYVFEAMMLMLKHKVMHLPVLKNSRPIGLI 278
>gi|402820645|ref|ZP_10870212.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
gi|402511388|gb|EJW21650.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ LTI +SDA + +R V ++ T + L+G+++++D+ + G
Sbjct: 12 TDVLTIDSSNKLSDAIAVLENRSVGILVATSPDEPLAGVISERDVVRALSNHGASALDRP 71
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
+S M+ NP+ + ++ +EA++ M + + RHLPV++NG++ ++ I + I E
Sbjct: 72 ISDFMSSNPVTINLETTVVEAMEIMTEKRIRHLPVIDNGKICGLVSIGDVVKRRIMDTEA 131
Query: 179 AAE 181
AE
Sbjct: 132 EAE 134
>gi|149188400|ref|ZP_01866693.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
gi|148837618|gb|EDL54562.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
Length = 635
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N L G++TD+D+T RVIAEG + + +MT NP+ V+ + L + A M+Q R
Sbjct: 209 NGKLVGLMTDRDMTKRVIAEG-HDNSAPIRDVMTPNPLTVSPNDLVLHAASLMMQHNVRG 267
Query: 151 LPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
LPVV G V+ +L + + + AI +EK S A ERQ
Sbjct: 268 LPVVSEGRVVGLLTTSHLVQNHRMQAIFLIEKIKYATSVRNMASFTTERQ 317
>gi|323701536|ref|ZP_08113209.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323533545|gb|EGB23411.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 145
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+T+K + T+ V +A + M+ V A+ + + N+ GIVTD+DI R +++
Sbjct: 3 KTLKDIMTKTVATVSPQQSVQEAAQLMSQNNVGAIPVVE-NSKCVGIVTDRDIALRAVSQ 61
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
G P T V +M+ + T + EA M + + R LPVVENG++ I+
Sbjct: 62 GQNPQSTTVQSVMSTGLVTGTPEMGVHEAANLMAEKQVRRLPVVENGQLTGIV 114
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
+L I+T+ VA VSP V AA+ M + + +V SK GI+T +D+ +R V+Q
Sbjct: 4 TLKDIMTKT--VATVSPQQSVQEAAQLMSQNNVGAIPVVENSKCVGIVTDRDIALRAVSQ 61
Query: 279 NLSPELTLVERFI 291
+P+ T V+ +
Sbjct: 62 GQNPQSTTVQSVM 74
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
T+P V DA + MA + + AV++T+ + ++ GI+T++D +V+ T V
Sbjct: 17 FTVPATASVFDAIKLMADKHIGAVIVTEGDEIV-GIMTERDYARKVVLMDRVSKHTPVRD 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMT + +V D + + M + RHLPV++NG +I ++ I + + ++ + +
Sbjct: 76 IMTSHVRYVRPDQTTDDCMALMTDKRMRHLPVIDNGRLIGMISIGDLVKNIMAEQQYTIQ 135
Query: 182 Q 182
Q
Sbjct: 136 Q 136
>gi|56419104|ref|YP_146422.1| inosine-5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|375007417|ref|YP_004981050.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|359286266|gb|AEV17950.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 148
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + TI V +A + M+ + + A+ + + N + G++TD+DIT RV ++G
Sbjct: 9 VQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVVE-NGQVKGMITDRDITLRVSSQGK 67
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P V+++MT + T + EA M Q + R LP+VEN ++ I+ + ++
Sbjct: 68 DPSTVKVAEVMTNQVVTGTPNMSVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNS 127
Query: 173 ISRMEKAAEQ 182
S +AAEQ
Sbjct: 128 ASN--EAAEQ 135
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
+IP V A + MA + + A+L+ + + + GI++++D +VI +T+V I
Sbjct: 18 SIPPTATVYAALQLMAEKGIGALLVIE-HGEIKGILSERDYARKVILMQRTSRETLVRDI 76
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT I+V+++ E + M + + RHLPV+E ++I +L I + D IS + EQ
Sbjct: 77 MTTAVIYVSANQTTDECMALMTRHRLRHLPVMEGNQLIGMLSIGDLVKDIISEQQFIIEQ 136
>gi|27367316|ref|NP_762843.1| signal transduction protein [Vibrio vulnificus CMCP6]
gi|27358885|gb|AAO07833.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus CMCP6]
Length = 621
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 70 VSDACRRMA-----SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
V+D+ R +A +R ++ D N ++ G+VTD+D+T V+A+ + + S +MT
Sbjct: 171 VTDSIRDVALAMCGKQRSSCAVVMDGNDIV-GLVTDRDMTASVVAKEKDVSERIES-VMT 228
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRMEKAA 180
NP+ + SD+ I+A+ M+Q R LPVV +G+V +L T +++ ++ +EK
Sbjct: 229 LNPVLIESDAKVIQAISLMLQYNIRCLPVVNHGKVAGLLTTTHLVHNHRTQSLFLIEKIK 288
Query: 181 EQGSAIAAAVEGVERQ 196
S A A ERQ
Sbjct: 289 YASSLNALAALKEERQ 304
>gi|442770277|gb|AGC70997.1| CBS domain protein [uncultured bacterium A1Q1_fos_2107]
Length = 145
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE TI +A + +RR+ A++++D + GIV+++D+ + A G + V+ +MT
Sbjct: 19 PETTI-ENAVGVLGTRRIGALVVSDDGRTVDGIVSERDVVAHLAAVGRTGLNSTVATVMT 77
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
R+ T + + M G+FRHLPVV +GE+ I+ I + +S +E
Sbjct: 78 RDVRTCTPGDALEDVMAIMTAGRFRHLPVVADGELAGIVSIGDAVERRVSELE 130
>gi|339058400|ref|ZP_08648859.1| putative signal-transduction protein [gamma proteobacterium
IMCC2047]
gi|330720398|gb|EGG98723.1| putative signal-transduction protein [gamma proteobacterium
IMCC2047]
Length = 623
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLT----DANALLSGIVTDKDITTRVIAEGLRPDQT 117
+T+ T V A RM V ++L+T D A + GI+TD DI R++A GL D T
Sbjct: 161 VTVSSSTTVRQAAIRMTEENVSSLLITQSESDQPAQVIGIITDTDIRRRLVATGLSSDIT 220
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
V+ IMT I+V S +A+ M++ +HLPV++
Sbjct: 221 -VADIMTTELIYVQSHQFVFDAMMLMLKHNVKHLPVLK 257
>gi|414070320|ref|ZP_11406306.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
gi|410807237|gb|EKS13217.1| CBS domain-containing protein [Pseudoalteromonas sp. Bsw20308]
Length = 631
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ + + D + M V +VL+TD N ++ GI+TD+
Sbjct: 152 VKSLIHRDVVTVDATSTIQDIAKLMTEEAVSSVLVTDVNKPINDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
DI T+V+A+GL + T IM+ N + + ++ EA+ M++ HLPVV+ I
Sbjct: 212 DIRTKVVAKGLGFN-TQAKDIMSTNLVLLDANDYIFEAVLAMLRDNLHHLPVVQKRRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|320159155|ref|YP_004191533.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio vulnificus MO6-24/O]
gi|319934467|gb|ADV89330.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus MO6-24/O]
Length = 621
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 70 VSDACRRMA-----SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
V+D+ R +A +R ++ D N ++ G+VTD+D+T V+A+ + + S +MT
Sbjct: 171 VTDSIRDVALAMCGKQRSSCAVVMDGNDIV-GLVTDRDMTASVVAKEKDVSERIES-VMT 228
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRMEKAA 180
NP+ + SD+ I+A+ M+Q R LPVV +G+V +L T +++ ++ +EK
Sbjct: 229 LNPVLIESDAKVIQAISLMLQYNIRCLPVVNHGKVAGLLTTTHLVHNHRTQSLFLIEKIK 288
Query: 181 EQGSAIAAAVEGVERQ 196
S A A ERQ
Sbjct: 289 YASSLNALAALKEERQ 304
>gi|332534581|ref|ZP_08410416.1| putative signal-transduction protein containing cAMP-binding and
CBS domain [Pseudoalteromonas haloplanktis ANT/505]
gi|332036001|gb|EGI72480.1| putative signal-transduction protein containing cAMP-binding and
CBS domain [Pseudoalteromonas haloplanktis ANT/505]
Length = 631
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ + + D + M V +VL+TD N ++ GI+TD+
Sbjct: 152 VKSLIHRDVVTVDATSTIQDIAKLMTEEAVSSVLVTDVNKPINDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+A+GL + T + IM+ N + + ++ EA+ M++ HLPVV+ I
Sbjct: 212 DLRTKVVAKGLAFN-TQANDIMSTNLVLLDANDYIFEAVLAMLRDNLHHLPVVQKRRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
gi|319765647|ref|YP_004131148.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 148
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + TI V +A + M+ + + A+ + + N + G++TD+DIT RV ++G
Sbjct: 9 VQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVVE-NGQVKGMITDRDITLRVSSQGK 67
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
P V+++MT + T + EA M Q + R LP+VEN ++ I+ + ++
Sbjct: 68 DPSTVKVAEVMTNQVVTGTPNMNVQEAANVMAQHQVRRLPIVENNQLQGIVALGDIATNS 127
Query: 173 ISRMEKAAEQ 182
S +AAEQ
Sbjct: 128 ASN--EAAEQ 135
>gi|392544354|ref|ZP_10291491.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas piscicida
JCM 20779]
Length = 612
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 50 ERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
ER + +L A+TI + +A + M+ RV ++++T+ A L G+VTD+D+ RV+A
Sbjct: 148 ERKISELMTKDAVTIAPTASIREAAKLMSLHRVSSIMVTE-QARLVGVVTDRDLRNRVLA 206
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
+ P +++IMT P + ++ AL M++ HLPV+
Sbjct: 207 QDKDPS-APLAEIMTEKPKHIFENNRVFSALHLMLKHNIHHLPVL 250
>gi|333924636|ref|YP_004498216.1| hypothetical protein Desca_2477 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750197|gb|AEF95304.1| CBS domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 145
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+T+K + T+ V +A + M+ V A+ + + N+ GIVTD+DI R +++
Sbjct: 3 KTLKDIMTKTVATVSPQQSVQEAAQLMSQNNVGAIPVVE-NSKCVGIVTDRDIALRAVSQ 61
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
G P T V +M+ + T + EA M + + R LPVVENG++ I+
Sbjct: 62 GQNPQSTTVQSVMSTGLVTGTPEMGVHEAANLMAEKQVRRLPVVENGQLAGIV 114
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
+L I+T+ VA VSP V AA+ M + + +V SK GI+T +D+ +R V+Q
Sbjct: 4 TLKDIMTKT--VATVSPQQSVQEAAQLMSQNNVGAIPVVENSKCVGIVTDRDIALRAVSQ 61
Query: 279 NLSPELTLVERFI 291
+P+ T V+ +
Sbjct: 62 GQNPQSTTVQSVM 74
>gi|152994733|ref|YP_001339568.1| hypothetical protein Mmwyl1_0699 [Marinomonas sp. MWYL1]
gi|150835657|gb|ABR69633.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas sp. MWYL1]
Length = 625
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE ++ + A R M RV ++L+ + + LSGIVTD+D+ +R++A G D ++V +MT
Sbjct: 169 PEESVQTIAIR-MTEARVSSILVVE-DKKLSGIVTDRDLRSRILALGGSAD-SLVKDVMT 225
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
R+P+ + D+L ++A M + HLP+V+
Sbjct: 226 RDPVSLRPDALVMQAQTLMSESNIHHLPIVD 256
>gi|356518816|ref|XP_003528073.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 70 VSDACRRMASRRVDA-VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT--RN 126
V +A + MA + + V+L ++GIVT++D +++A+G P T V +IMT N
Sbjct: 81 VVNAMKNMADNNIGSLVVLKPEGQHIAGIVTERDCLKKIVAQGRSPLHTQVGQIMTDENN 140
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I VTSD+ ++A++ M + RH+PV++ G+++ ++ I
Sbjct: 141 LITVTSDTNILKAMKIMTENHIRHVPVID-GKIVGMISI 178
>gi|348030183|ref|YP_004872869.1| hypothetical protein GNIT_2779 [Glaciecola nitratireducens FR1064]
gi|347947526|gb|AEP30876.1| signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Glaciecola
nitratireducens FR1064]
Length = 610
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+TI + + A M+ + + +VL+ + N L+ GI+TD+D+ RV+A GL Q V +
Sbjct: 158 ITISQTDSIQSAGALMSEKHISSVLIIENNKLM-GIITDRDLRNRVVAVGLNM-QLPVKQ 215
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
IMT NP ++T + +A+ M + HLPV++
Sbjct: 216 IMTENPAYLTKNKTLFDAVCIMNEKSINHLPVLD 249
>gi|241116892|ref|XP_002401659.1| conserved hypothetical protein [Ixodes scapularis]
gi|215493203|gb|EEC02844.1| conserved hypothetical protein [Ixodes scapularis]
Length = 282
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT---VVS 120
+ E T ++ M +R+ L+TD N L GI+TD D+ + DQ + S
Sbjct: 175 VYEDTSFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGDLRRHI------NDQIYLKIAS 228
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
IMT+NPI ++S+ A EAL M ++P+V+N +I I+ I L
Sbjct: 229 SIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDNNVIIGIIHIHDLL 277
>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 174
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVI-AEGLRPDQTVVSKIM 123
PE T V+ A + R + A+L+ +A L GI++++DI R+ G QTV +M
Sbjct: 51 PEDT-VAKAVEVLRDRGIGALLVKNAQGDLVGILSERDIVRRLADTPGATLPQTV-EGLM 108
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+R+ I T+D +E L+ M G+FRH+PV+E +++ ++ I + ++ +E A Q
Sbjct: 109 SRDVITATTDQSVVEVLRLMTDGRFRHMPVLEQEQLVGMITIGDVVNFRLTALEYEALQ 167
>gi|149912278|ref|ZP_01900851.1| CBS domain protein [Moritella sp. PE36]
gi|149804648|gb|EDM64705.1| CBS domain protein [Moritella sp. PE36]
Length = 614
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S A+TI + DA + M ++ V +++ +GIVTDKDI R +AEGL Q
Sbjct: 162 SPAITISMQASIQDAAKYMTTKAVSCLIIM-GETEPTGIVTDKDIRRRCVAEGLNS-QCS 219
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
V++IMT N + +AL M+ + HLPV ++G ++ +L T
Sbjct: 220 VTEIMTANMTTIDIKLCGHDALALMISQRIHHLPVTKHGALVGMLTAT 267
>gi|255263911|ref|ZP_05343253.1| CBS domain containing protein [Thalassiobium sp. R2A62]
gi|255106246|gb|EET48920.1| CBS domain containing protein [Thalassiobium sp. R2A62]
Length = 144
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 64/116 (55%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ G V + ++ +R+ V+++ + + GI++++DI + G+ +
Sbjct: 16 ITVLPGMSVGEVAAVLSKKRIGTVVVSASGSRADGILSERDIVRELGTRGVACMTDSAAD 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
IMT NP+ +A L KM QG+FRH+PVV++GE++ ++ + + +S +E
Sbjct: 76 IMTVNPVTCAPTDVADVVLAKMTQGRFRHMPVVKDGEMVGLITLGDVVKARLSELE 131
>gi|163851685|ref|YP_001639728.1| hypothetical protein Mext_2262 [Methylobacterium extorquens PA1]
gi|218530491|ref|YP_002421307.1| signal transduction protein with CBS domains [Methylobacterium
extorquens CM4]
gi|240138851|ref|YP_002963326.1| hypothetical protein MexAM1_META1p2261 [Methylobacterium extorquens
AM1]
gi|254561457|ref|YP_003068552.1| hypothetical protein METDI3043 [Methylobacterium extorquens DM4]
gi|418062143|ref|ZP_12699951.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
gi|163663290|gb|ABY30657.1| CBS domain containing protein [Methylobacterium extorquens PA1]
gi|218522794|gb|ACK83379.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens CM4]
gi|240008823|gb|ACS40049.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens AM1]
gi|254268735|emb|CAX24696.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
gi|373564304|gb|EHP90425.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 64/116 (55%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P + +A +A +R+ A+++ DA + GI++++D+ + +EG +S
Sbjct: 15 VTLPPHRTIDEAIHLLAEKRIGALVVGDAEGRVIGILSERDVMRALASEGASALDRPISH 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRME 177
MT + T + + ++ M +G+FRHLPVVE G ++ ++ I + I+ +E
Sbjct: 75 HMTTKVVTCTRRASIEDVMETMTEGRFRHLPVVEEGRLVGVVSIGDVVKRRIATVE 130
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+A R+ AV + D +A++ GI +++DI + + G + +MT++PI D
Sbjct: 30 LAQNRIGAVPVVDGDAVV-GIFSERDIVRLISSYGPEALDRRIDDVMTKSPITCAPDMAV 88
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
I AL +M Q + RHLPVVE G+++ + I + I R+E A
Sbjct: 89 IVALSQMTQKRIRHLPVVEGGKMVGFVSIGDLVKYRIDRIEAEA 132
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA R MA + + A+L+ D ++ +GIVT++D +V G T V+ +MTR FV
Sbjct: 27 DALRLMADKGIGALLVMDGKSI-AGIVTERDYARKVALLGRTSGDTRVADVMTRAVRFVR 85
Query: 132 SDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ + L M + + RHLPVV E+G ++ ++ I + D IS + EQ
Sbjct: 86 PVQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVKDVISEQQFIIEQ 137
>gi|156938201|ref|YP_001435997.1| hypothetical protein Igni_1414 [Ignicoccus hospitalis KIN4/I]
gi|156567185|gb|ABU82590.1| CBS domain containing protein [Ignicoccus hospitalis KIN4/I]
Length = 127
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P + + + +M + V +VL+ + + L+ GI T++D+ R EG +P+ +VS MT
Sbjct: 15 PPNSTLKEVVHKMRAHNVGSVLILNGDELV-GIFTERDLV-RAFDEGAKPED-LVSDFMT 71
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDI 165
RNPI V + ALQKM+ RHLPVV G V+ ++ +
Sbjct: 72 RNPIVVNPEESLESALQKMLAHGIRHLPVVSPEGRVLGVVSL 113
>gi|373116607|ref|ZP_09530759.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669174|gb|EHO34277.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 145
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A R ++ V ++ + + L GIVTD+DI R +A P +T V IMTRN V+
Sbjct: 23 AARLLSRHNVGSLPVCGEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMTRNCAVVSP 82
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
D A EA + M + R LPV+E G+V+ ++ D+ +C
Sbjct: 83 DDDAREATRIMAAKQVRRLPVLEGGKVVGMVSLGDLAQC 121
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT TIV DA +MA + ++ +TD + + G++T++DI RVI P T VS+
Sbjct: 16 LTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNRVLGVMTERDIFRRVIGASRDPKTTPVSE 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
+MT D ++ +Q M +FR LP+V E+ +IA++
Sbjct: 76 VMTTEVRAAHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVM 118
>gi|398810185|ref|ZP_10569015.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398083876|gb|EJL74580.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 142
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA +A V A+++ D L+ G ++++D T +V +G + V IMT +
Sbjct: 22 TSVFDALSTLARFEVGALMVMDGEKLV-GFLSERDYTRKVALQGKNSKEVKVRDIMTPDV 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ VT + + M Q KFRHLPVV+ +VI ++ I + D IS E EQ
Sbjct: 81 MTVTPQTRTRACMTLMSQRKFRHLPVVDGDKVIGMISIQDLMDDIISDHEATIEQ 135
>gi|358449666|ref|ZP_09160148.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357226188|gb|EHJ04671.1| cyclic nucleotide-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 638
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A RM V ++++TD N + +GI T +D+ T +IAEG P T + ++MT+NP
Sbjct: 191 VRKAVARMHENNVGSIIVTDENRIPTGIFTLRDLRT-MIAEGTGPLDTPIQQVMTKNPCC 249
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN 156
+ S + A EA M + F HL V+++
Sbjct: 250 LPSHADAFEAAMLMAEHHFAHLCVIDD 276
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A R MA + V AVL+ D L+ GIV+++D +V+ T V++I + + V+
Sbjct: 3 EAIRLMAEKAVGAVLVMDGPRLV-GIVSERDYAHKVVLRDRSSSTTSVAEITSAEVVTVS 61
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 62 PSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 105
>gi|411004519|ref|ZP_11380848.1| hypothetical protein SgloC_17051 [Streptomyces globisporus C-1027]
Length = 134
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTI + A R M++RR+ A ++ D + GI+T++DI + GL PD+ S
Sbjct: 12 LTIGPTHTLRQAARLMSARRIGAAVVHDPDTCGLGIITERDILD-AVGSGLDPDRETASA 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDITKCLYDAISRME 177
T + +F EA + M G FRHL +V +G+ ++++ DI +C A R
Sbjct: 71 HTTTDVVFAAPAWTLEEAAEAMTHGGFRHL-IVLDGDGPVGIVSVRDIIRCWAPAHRRTP 129
Query: 178 KAA 180
AA
Sbjct: 130 AAA 132
>gi|385330995|ref|YP_005884946.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
adhaerens HP15]
gi|311694145|gb|ADP97018.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
adhaerens HP15]
Length = 638
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V A RM V ++++TD N + +GI T +D+ T +IAEG P T + ++MT+NP
Sbjct: 191 VRKAVARMHENNVGSIIVTDENRIPTGIFTLRDLRT-MIAEGTGPLDTPIQQVMTKNPCC 249
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN 156
+ S + A EA M + F HL V+++
Sbjct: 250 LPSHADAFEAAMLMAEHHFAHLCVIDD 276
>gi|299135308|ref|ZP_07028499.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298590285|gb|EFI50489.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 142
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+SDA R + R V AVL+ + + GI++++D+ + G VS++MTR +
Sbjct: 23 LSDAIRVLTERHVGAVLVMKDHHI-EGILSERDVVRVLGKHGASVLAMPVSEVMTRKVVT 81
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
A ++KM GKFRHLPVVEN V+ ++ I + + E+ E
Sbjct: 82 CRRADTAASIMEKMTNGKFRHLPVVENERVVGLISIGDIVKWRVKEYEREQE 133
>gi|386827482|ref|ZP_10114589.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
gi|386428366|gb|EIJ42194.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
Length = 144
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+ + ++I E + A ++M V AVL+ L GIVT++D+ D
Sbjct: 12 MCEVVSIVETATMLAATKKMCEHYVGAVLIVSNAGLPIGIVTERDVLRFCATRSTELDTV 71
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+V+ +MT++ I T D+ EAL M + KFRH+P+V++G+++ ++
Sbjct: 72 LVTDVMTKDLIIGTFDTPIDEALTIMTEKKFRHIPIVDSGKIVGMV 117
>gi|291297328|ref|YP_003508726.1| putative signal transduction protein [Meiothermus ruber DSM 1279]
gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
ruber DSM 1279]
Length = 145
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 52 TVKKLRLSKALTI----PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRV 107
TV++L L+K + PE T V +A RMA+ V A+++ + L+ GI +++D ++
Sbjct: 4 TVRQLLLAKGNKVHAISPEAT-VFEALERMAAHDVGALMVMKDDQLV-GIFSERDYARKI 61
Query: 108 IAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITK 167
I G T V ++MT + I VT ++ + + M RHLPV+E+G+++ ++ I
Sbjct: 62 ILMGRISKDTRVGEVMTSDLITVTPEATVADCMNLMTDHHIRHLPVLEDGKLVGVISIGD 121
Query: 168 CLYDAISRME 177
+ I++ E
Sbjct: 122 VVKAIITQQE 131
>gi|85713182|ref|ZP_01044213.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina baltica OS145]
gi|85693006|gb|EAQ30973.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Idiomarina baltica OS145]
Length = 612
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+++ T + +A + M+ + ++L+ D++ L+ GI+TD+DI RV+A+GL + TV +
Sbjct: 159 ISLASDTTIQNAAQCMSENGISSILVVDSDQLV-GILTDRDIRNRVVAQGLGFNVTVAA- 216
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+MT P FV + ++AL M HLPVV+
Sbjct: 217 VMTHLPEFVFAHRSLLDALTTMTANNVHHLPVVD 250
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ D L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 29 RLMAEKGIGAVLVMDGPRLI-GIVSERDYARKVVLRDRASSTTSVAEIMSTEVVTVSPSD 87
Query: 135 LAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+Q M G+FRHLPVVENG V ++ I + I ++ +Q
Sbjct: 88 TVERCMQLMTDGRFRHLPVVENGRVHGVISIGDLVKAVIENQQRDIDQ 135
>gi|392539056|ref|ZP_10286193.1| hypothetical protein Pmarm_13123 [Pseudoalteromonas marina mano4]
Length = 631
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ V + + M V +VL+TD N ++ GI+TDK
Sbjct: 152 VKSLLHRDVVTVDATETVKNIAQLMTDESVSSVLVTDVNKPINNDPQEDDGQVVGIITDK 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+A+GL + T IM+ N + + + EA+ M++ HLPVV+ I
Sbjct: 212 DLRTKVVAQGLEYN-TPAHVIMSTNLVLLDQNDYIFEAVLAMLRDNLHHLPVVQKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|300697550|ref|YP_003748211.1| conserved protein of unknown function, CBS domain [Ralstonia
solanacearum CFBP2957]
gi|299074274|emb|CBJ53819.1| conserved protein of unknown function, CBS domain [Ralstonia
solanacearum CFBP2957]
Length = 155
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTD---ANALLSGIVTDKDITTRVIAEGLRPDQT 117
A+ IP + +A R+M + V A+++T+ G+VTD+DI +A G P QT
Sbjct: 11 AVHIPLSCTLQEAARQMRDKHVGALIVTEHAPTGPRAVGVVTDRDIVLDAVAAGADPSQT 70
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL------YD 171
V +M+R + V D+ +ALQ+M+ R + VV + ++ +L + L +D
Sbjct: 71 CVCDVMSRGIVSVARDASLSDALQEMLSTGVRRVGVVADQALVGVLSLDDVLGAMALEWD 130
Query: 172 AISRM 176
I+R+
Sbjct: 131 LIARL 135
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ V D +A + AV+++D A + GIV+++D+ R+ AEG+ V +
Sbjct: 15 VTVARDRTVRDLLALLAEHGIGAVVVSDDGASVDGIVSERDVVRRLHAEGVGVLDAAVEQ 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
IMTR+ D++ + + M + +FRH+PVV G + I+ I
Sbjct: 75 IMTRDVQTCDPDTMLDDLMHMMTEHRFRHVPVVHEGRLAGIVSI 118
>gi|119387278|ref|YP_918312.1| cyclic nucleotide-binding protein [Paracoccus denitrificans PD1222]
gi|119377853|gb|ABL72616.1| cyclic nucleotide-binding protein [Paracoccus denitrificans PD1222]
Length = 603
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A R M RV ++ + D + L+ G+VT +DI+ R++AEG R V+++MT +PI ++
Sbjct: 160 EAARAMRDARVSSIGVLDGDRLV-GLVTIRDISNRIVAEG-RDANVPVAQVMTPDPITLS 217
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
L + L M++ + HLPVVE G + ++ D+T+
Sbjct: 218 PLELGYDVLNIMLERRIGHLPVVEKGRFVGMVSQTDLTR 256
>gi|441185228|ref|ZP_20970479.1| oxidoreductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440613990|gb|ELQ77322.1| oxidoreductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 147
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P+ ++V +A + M ++ + VL+T LL G+VTD+DIT R +A+G+ P + T
Sbjct: 18 PDASLV-EAAQLMRAQDIGDVLVTQDGVLL-GVVTDRDITLRAVADGVDPLAVSCRSVCT 75
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGS 184
P+ V D EA+ M R LPVVENG + ++ +I + +A + S
Sbjct: 76 PEPVCVAPDDDISEAVTLMRANAVRRLPVVENGTPVGVV--------SIGDLARAQDPDS 127
Query: 185 AIA 187
A+A
Sbjct: 128 ALA 130
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE + V DA + MA + V A+ + DA+ L GIV+++D +++ +G T VS IMT
Sbjct: 21 PEDS-VFDALKLMAEKNVGALPVADASGRLVGIVSERDYARKIVLQGRSSFVTPVSAIMT 79
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
I V E ++ M + RHLPV++ G + +L I + + ++ + +Q
Sbjct: 80 SKVITVEPRQSIRECMEIMTEKHLRHLPVLDEGRTVGLLSIGDVVKETMAEQDNLIQQ 137
>gi|374298367|ref|YP_005048558.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
gi|359827861|gb|AEV70634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
Length = 139
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T+V +A + M V +V + D N ++ G+VTD+DI R +A G P T V +MT
Sbjct: 16 PTNTVV-EAAQVMQKLNVGSVPVFDQNKVV-GMVTDRDIVVRNVAHGKSPQDTKVQDVMT 73
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
VT D E + M Q + R +PVVEN +++ IL
Sbjct: 74 SQVTTVTPDMEVEEVSKIMAQQQIRRVPVVENNQLVGIL 112
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A MA + V AVL+ D L+ GIV+++D +V+ T V++IM+ +
Sbjct: 24 VIEAIGLMAEKAVGAVLVMDGPRLV-GIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
V+ +Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 83 VSPSDTVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
Length = 173
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 7 SRRSQKRAPSTSKRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPE 66
S ++ R K T S N+S + G+ S GG TI
Sbjct: 4 SYQAPSRGDQAKKTTHSQSAQSNISHETAIVGQLISKKGGT-------------TYTITS 50
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV-------- 118
+S A + RR+ A+L+T L GI++++DI R +AE P QT+
Sbjct: 51 SDTLSTAVTVLRDRRIGALLVTGEGGALEGILSERDIV-RKLAE--TPGQTLPQTVGENM 107
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
SK+ T +P SD L + L++M +G+FRH+PVV++G++ +L I + ++ +E
Sbjct: 108 TSKVETCSP----SDPL-VAVLRRMNEGRFRHMPVVDDGKLCGMLTIGDVVNYRLNELEY 162
Query: 179 AAEQ 182
A Q
Sbjct: 163 EALQ 166
>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P V +A +A +++ A+++ DA + GI++++D+ + +G +S
Sbjct: 15 VTVPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRALARDGAAALDQSISH 74
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
MT + T + + ++ M +G+FRHLPVVE+G ++ ++ I
Sbjct: 75 YMTAKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGHLVGVVSI 118
>gi|398825173|ref|ZP_10583477.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398224117|gb|EJN10438.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 142
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A + + +++ AVL+ + + L GI++++DI + A G + VS++MTR +
Sbjct: 26 AVKLLGEKKIGAVLVMN-QSRLEGILSERDIVRVIGARGAAALEEPVSEVMTRKVVTCKE 84
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
E ++ M GKFRHLPV++NG+V+ ++ I
Sbjct: 85 TDTVAELMEMMTTGKFRHLPVLDNGKVVGLISI 117
>gi|238060692|ref|ZP_04605401.1| signal transduction protein [Micromonospora sp. ATCC 39149]
gi|237882503|gb|EEP71331.1| signal transduction protein [Micromonospora sp. ATCC 39149]
Length = 138
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV + ++ +T+ ++ A R M + V++T + ++ GIVTD+DIT R +AEG
Sbjct: 3 TVGEFMTTRLVTMDGDETLTAAAREMRDSAIGDVVVTAGDDVV-GIVTDRDITVRGVAEG 61
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
L P +T +++I +R+ I V+ A+ A M R LPV++ G ++ ++ I
Sbjct: 62 LDPSKTPLNRITSRDVITVSQYDDAVAAADLMRTYAVRRLPVIDGGRLVGLISI 115
>gi|119471954|ref|ZP_01614239.1| hypothetical protein ATW7_12508 [Alteromonadales bacterium TW-7]
gi|119445212|gb|EAW26503.1| hypothetical protein ATW7_12508 [Alteromonadales bacterium TW-7]
Length = 631
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ V + + M V +VL+TD N ++ GI+TDK
Sbjct: 152 VKSLLHRDVVTVDATETVKNIAQLMTDESVSSVLVTDVNKPINNDPQEDDGQVVGIITDK 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+A+GL + T IM+ N + + + EA+ M++ HLPVV+ I
Sbjct: 212 DLRTKVVAQGLEYN-TPAHVIMSTNLVLLDQNDYIFEAVLAMLRDNLHHLPVVQKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P +++S A + MA + + A+++T+ +A++ GI T++D ++ G T+ +MT
Sbjct: 21 PTDSVLS-ALQLMADKGIGALVVTEGDAIV-GIFTERDYARKIALLGRTSAATLARDVMT 78
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
FV D + + +Q M G+ RHLPVVE G+++ ++ I + D IS + EQ
Sbjct: 79 TAVRFVRPDQSSEQCMQIMSTGRLRHLPVVEGGKLVGMISIGDLVKDIISEQKFIIEQ 136
>gi|374628611|ref|ZP_09700996.1| CBS domain containing membrane protein [Methanoplanus limicola DSM
2279]
gi|373906724|gb|EHQ34828.1| CBS domain containing membrane protein [Methanoplanus limicola DSM
2279]
Length = 287
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 35/222 (15%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+++ ++ +T+ E V++ R + ++ + + N+ + GIVT++DI + E
Sbjct: 93 VREIMTTRLITLKENAKVNEVVRTIVDKKCGGLPIISENSSVVGIVTERDILRTLSCE-- 150
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
+ T VS+IMT+NP + D+L + ++M+ +FR LPVV + L+
Sbjct: 151 -DNYTSVSEIMTKNPYVTSPDALMTDVAKEMIFRRFRRLPVVSD----------DVLFGI 199
Query: 173 ISRME--KAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKV 230
I+ M+ K +G V G + + M P I N ++
Sbjct: 200 ITAMDIMKYVGKGDLFKGMVTG-----------------NISDLMSVPVRDLI---NGEL 239
Query: 231 AIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVL 272
+P P+ AK+M + ++ S + G++T D++
Sbjct: 240 YTTTPDKPICEVAKEMISRNVGALPVIENSHLVGVITEFDLV 281
>gi|449469967|ref|XP_004152690.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
gi|449520034|ref|XP_004167039.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
Length = 206
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 72 DACRRMASRRVDA-VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP--I 128
DA + MA + + V++ ++GIVT++D ++IA+G P T V +IMT +
Sbjct: 84 DAVQNMARHNIGSLVVMKSEGENIAGIVTERDYLKKIIADGRSPIYTKVGEIMTHEDKLV 143
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEV--IAILDITKCL 169
+TSD+ ++A+Q M + RH+PV++ V I+I+D+ + +
Sbjct: 144 TITSDTNILKAMQLMTENHIRHIPVIDGKLVGMISIVDVARAV 186
>gi|365098000|ref|ZP_09331764.1| cyclic nucleotide-binding protein [Acidovorax sp. NO-1]
gi|363413136|gb|EHL20345.1| cyclic nucleotide-binding protein [Acidovorax sp. NO-1]
Length = 621
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+ +P T + ++M RV +VLL + L G+VTD+D+ RV+A+GL D+ +S
Sbjct: 165 IALPPHTSIRAGAQQMRELRVSSVLLVEQGHLF-GLVTDRDLRNRVVAQGLDIDRP-MSD 222
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
I T P+ + + S A +AL M + H+PV++ VI ++ T
Sbjct: 223 IATLAPMTLQAQSPAFDALLLMARHNVHHVPVMDGDRVIGMITAT 267
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 200 NFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV--------AAKKMREFRS 251
+ AP + + T R+ S + N+ V + DP+A+ A++MRE R
Sbjct: 131 SLPAPASLVTTERD-----SQGVLTLLNSPVRTLIKRDPIALPPHTSIRAGAQQMRELRV 185
Query: 252 NSALIVTGSKIQGILTSKDVLMRVVAQNL 280
+S L+V + G++T +D+ RVVAQ L
Sbjct: 186 SSVLLVEQGHLFGLVTDRDLRNRVVAQGL 214
>gi|397779758|ref|YP_006544231.1| hypothetical protein BN140_0592 [Methanoculleus bourgensis MS2]
gi|396938260|emb|CCJ35515.1| putative protein MJ0653 [Methanoculleus bourgensis MS2]
Length = 187
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+++ S TI G V+ A + M V + ++ N L GIVT++DI +V+A+ L
Sbjct: 16 VREVMRSHPTTIDVGETVARAAQAMCRDEVGSCIVL-QNNLPIGIVTEEDINCKVVAKDL 74
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+P VS+IM+ I + +D L +A MV+ + R LPVVEN VI I+ +
Sbjct: 75 KPSSIHVSEIMSTPLITIGADKLVGDASTMMVKHRVRRLPVVENQLVIGIVTV 127
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
+A R MA + + AVL+ D LL GIV+++D +V+ T V+ IM+ + V+
Sbjct: 3 EAIRLMAEKAIGAVLVMDGPRLL-GIVSERDYARKVVLRDRASSTTSVAGIMSAEVVTVS 61
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEV---IAILDITKCLYDA 172
+Q M G+FRHLPVVEN V I+I D+ K + +A
Sbjct: 62 PSDTVERCMQLMSDGRFRHLPVVENSRVQGLISIGDLVKAVIEA 105
>gi|392308049|ref|ZP_10270583.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas citrea
NCIMB 1889]
Length = 612
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+++A + M+ + ++++TD + LL G++TD+D+ RV+A GL P V IMT P F
Sbjct: 168 IAEAAQVMSRHGISSLIITDGSQLL-GLITDRDLRNRVLAVGLDP-SLPVETIMTEKPKF 225
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEV 159
+ ++ AL M++ HLPV++ V
Sbjct: 226 IFENNRVFSALHLMLKHNIHHLPVLDEEYV 255
>gi|340787171|ref|YP_004752636.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
gi|340552438|gb|AEK61813.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
Length = 151
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
TI V DA + M+ + V A+L+T + GIVT++D ++I +G T VS I
Sbjct: 23 TIAPDAKVFDAIKMMSDKSVGALLVT-VQGKIVGIVTERDYARKMILKGRSSTDTSVSDI 81
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
MT + ++V D + + M + + RHLP++++ +++ I+ I + D IS + +Q
Sbjct: 82 MTSSVMYVRLDDTNEQCMALMTENRLRHLPILDDDKLVGIISIGDLVKDIISEQQFIIQQ 141
>gi|359456201|ref|ZP_09245389.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
gi|358046761|dbj|GAA81638.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20495]
Length = 631
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ + + D + M V +VL+TD N ++ GI+TD+
Sbjct: 152 VKSLIHRDVVTVDATSTIQDIAKLMTEEAVSSVLVTDVNKPINDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+A+GL + T IM+ N + + ++ EA+ M++ HLPVV+ I
Sbjct: 212 DLRTKVVAKGLAFN-TQAKDIMSTNLVLLDANDYIFEAVLAMLRDNLHHLPVVQKRRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
Length = 144
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R + K + S +I V A + MA + + A+L+ D ++ GI +++D +VI +
Sbjct: 5 RHILKNKGSSVWSIGPDETVYKALQMMAEKEIGALLVLDGEKVV-GIFSERDYARKVILQ 63
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
G T +S++M R+ I+ + D E++ M K RHLPV+E G++ ++ +
Sbjct: 64 GRSSANTKISELMIRDVIYGSPDDPIQESMAIMTANKIRHLPVIEEGKLCGMVTSGDIIN 123
Query: 171 DAISR 175
ISR
Sbjct: 124 HIISR 128
>gi|390938363|ref|YP_006402101.1| putative signal transduction protein [Desulfurococcus fermentans
DSM 16532]
gi|390191470|gb|AFL66526.1| putative signal transduction protein with CBS domains
[Desulfurococcus fermentans DSM 16532]
Length = 141
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 56 LRLSKALTIPEGTI-----VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
LR+S ++ P TI V A + M +V++ +++ LL+GIVT KDI V A
Sbjct: 12 LRVSDIMSTPPITIKETESVEKAAKLMFENNTSSVIVVNSDGLLTGIVTAKDIVAAV-AL 70
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDIT 166
G V++ M NP+ + D+ EAL+KM + RHLPVV+ ++++ DI
Sbjct: 71 GKIGQDIPVARFMKENPLTIGPDAHITEALEKMREFNVRHLPVVDKNNKPVGMVSVRDIM 130
Query: 167 KCLYDAISRME 177
L + +E
Sbjct: 131 DVLLTLLKIIE 141
>gi|365890914|ref|ZP_09429396.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333221|emb|CCE01927.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 142
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T +++A + +A RR+ AVL+ A + GI++++DI + G VS +MTR
Sbjct: 21 TTLAEAAKLLADRRIGAVLVM-AGTRMEGILSERDIVRSLGERGAAALTEPVSSVMTRRV 79
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ E ++ M GKFRHLPV+E G V+ ++ I
Sbjct: 80 VSCRPADTVAEIMEMMTNGKFRHLPVIEGGLVVGLISI 117
>gi|218883563|ref|YP_002427945.1| putative signal-transduction protein with CBS domain
[Desulfurococcus kamchatkensis 1221n]
gi|218765179|gb|ACL10578.1| putative signal-transduction protein with CBS domain
[Desulfurococcus kamchatkensis 1221n]
Length = 132
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 56 LRLSKALTIPEGTI-----VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
LR+S ++ P TI V A + M +V++ +++ LL+GIVT KD+ V A
Sbjct: 3 LRVSDIMSAPPITIKETESVEKAAKLMFENNTSSVIVVNSDGLLTGIVTAKDVVAAV-AL 61
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDIT 166
G V++ M NP+ ++ D+ EAL+KM + RHLPVV+ ++++ DI
Sbjct: 62 GKIGQDIPVARFMKENPLTISPDAHITEALEKMREFNVRHLPVVDKNNKPVGMVSVRDIM 121
Query: 167 KCLYDAISRME 177
L + +E
Sbjct: 122 DILLTLLKIIE 132
>gi|209884748|ref|YP_002288605.1| hypothetical protein OCAR_5609 [Oligotropha carboxidovorans OM5]
gi|337741598|ref|YP_004633326.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386030614|ref|YP_005951389.1| hypothetical protein OCA4_c23880 [Oligotropha carboxidovorans OM4]
gi|209872944|gb|ACI92740.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
gi|336095682|gb|AEI03508.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336099262|gb|AEI07085.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 142
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTV 118
+ ++I +S+A ++SR + AVL+ + + GI++++D+ RV+A+ G Q
Sbjct: 13 EVISIHSDATLSEAIALLSSRHIGAVLVMKDHHI-EGILSERDVV-RVLAKRGAEALQEP 70
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
V +MTR + A ++KM GKFRHLPVVEN V+ ++ I + + E
Sbjct: 71 VGDVMTRKVVTCRRADTAASIMEKMTNGKFRHLPVVENDRVVGLISIGDIVKWRVKEFEH 130
Query: 179 AAE 181
E
Sbjct: 131 EQE 133
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ T+ V +A +MA V A+ + DA+ + G+ +++D +VI G
Sbjct: 13 HEVYTVAPDVTVFEALEKMAEYNVGALPVVDASGQIVGLFSERDYARKVILRGKASKDIP 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYD---- 171
VS+IM+ + +++T ++ + + M + RHLPV+E G ++ + D+ K + D
Sbjct: 73 VSEIMSTHVLYITPETTDWQCMALMTDKRVRHLPVLEEGRLVGFISIGDVVKSIMDEQKF 132
Query: 172 AISRMEKAAEQG 183
I ++E+ ++G
Sbjct: 133 HIEQLEQYIQRG 144
>gi|257055170|ref|YP_003133002.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora viridis DSM 43017]
gi|256585042|gb|ACU96175.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora viridis DSM 43017]
Length = 131
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS A RRMAS V A+ + + L G++TD+DI +V+AEG P ++ + +
Sbjct: 14 VSRAARRMASEGVGALPIKGEDHKLKGMLTDRDIVVKVLAEGKDPVALHAGELAQGDVVS 73
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDA 172
V D AL+KM + + R LPVV+ E++ I+ D + L DA
Sbjct: 74 VGPDEDVSVALEKMARHQLRRLPVVQEEELVGIVAQADAARELSDA 119
>gi|407785949|ref|ZP_11133096.1| signal-transduction protein [Celeribacter baekdonensis B30]
gi|407202899|gb|EKE72889.1| signal-transduction protein [Celeribacter baekdonensis B30]
Length = 144
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT 117
+ +A+TI V DA ++SR++ AV++ GI++++DI + G
Sbjct: 12 IGEAITIRPDMTVGDAAALLSSRKIGAVIVATDPERPEGILSERDIVRELGKTGGEILGH 71
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAIS 174
VS MTR + A+ L++M QG+FRH+PV+E ++I I+ D+ K D ++
Sbjct: 72 QVSDFMTRKLVSCEPTDTALVVLERMSQGRFRHMPVMEGDKMIGIVSIGDVVKARLDELA 131
Query: 175 RMEKAAEQG 183
ME A +G
Sbjct: 132 -MENNALEG 139
>gi|374855295|dbj|BAL58156.1| CBS domain containing protein [uncultured Acidobacteria bacterium]
Length = 155
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 43 SVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKD 102
SV A E +++L LS + + GT V + M RR VL+ + L GI T++D
Sbjct: 2 SVEDALREAKIRELPLSPPVCVAMGTQVGEVLELMKRRRAHCVLICEGEHL-RGIFTERD 60
Query: 103 ITTRVIAEGLRPD-QTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLP-VVENGE-- 158
+ +++ GL D + + MT +P+ + + EA++ M +G +RH+P VVE+G
Sbjct: 61 VVNKIL--GLPVDLRAPIESFMTPSPVTLHPEDRVWEAMRLMDEGGYRHIPLVVEDGRVA 118
Query: 159 -VIAILDITKCL 169
VI++ DI L
Sbjct: 119 GVISVQDIINFL 130
>gi|126179737|ref|YP_001047702.1| signal-transduction protein [Methanoculleus marisnigri JR1]
gi|125862531|gb|ABN57720.1| putative signal-transduction protein with CBS domains
[Methanoculleus marisnigri JR1]
Length = 187
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+++ S TI G V+ A + M V + ++ N L +GIVT++DI +V+A+ L
Sbjct: 16 VREVMQSHPTTIDVGETVARAAQIMCRDEVGSCIVL-QNNLPTGIVTEEDINCKVVAKDL 74
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+P VS+IM+ I + +D L +A MV+ + R LPVVE+ VI I+
Sbjct: 75 KPGDIRVSEIMSTPLITIGADKLVGDAAAMMVKHRVRRLPVVEDQMVIGIV 125
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+IP V A + MA + + AVL+ + ++ GI++++D +VI T+V
Sbjct: 17 FSIPPTATVYAALQLMAEKGIGAVLVMEHGKIV-GILSERDYARKVILMQRSSRDTLVRD 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMT + I+V+ D E + M + + RHLPV+ ++I +L I + D IS + E
Sbjct: 76 IMTSSVIYVSGDQSTDECMALMTKHRMRHLPVMNGEDLIGMLSIGDLVKDIISEQQFIIE 135
Query: 182 Q 182
Q
Sbjct: 136 Q 136
>gi|340030683|ref|ZP_08666746.1| cyclic nucleotide-binding protein [Paracoccus sp. TRP]
Length = 603
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT T +A R M RV ++ + D L+ G+VT +DI+ R++AEG R V++
Sbjct: 150 LTCTPETPAIEAARAMRDARVSSIGVLDGERLV-GLVTIRDISNRIVAEG-RDVNVPVAQ 207
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
+MT +PI ++ L + L M++ + HLPVVE G + ++ D+T+
Sbjct: 208 VMTPDPITLSPAELGYDVLNIMLERRIGHLPVVEKGRFVGMVSQTDLTR 256
>gi|291440295|ref|ZP_06579685.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
gi|291343190|gb|EFE70146.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
Length = 157
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 33 PPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA 92
P P G S+ AG + A IP + A + M V A+ ++DAN
Sbjct: 5 PRRPSGTGRYSMTTAG------DIMHRGAQWIPAHETLDRAAQLMRELNVGALPISDANE 58
Query: 93 LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLP 152
L GI+TD+DI +A G P + + P ++ +D+ E LQ+M + R LP
Sbjct: 59 RLCGILTDRDIVVGCVAVGHDPARVTAGDMAQGTPRWIEADADISEVLQEMQTHRIRRLP 118
Query: 153 VVENGEVIAIL---DITKCLYD 171
V++N ++ ++ D+ + L D
Sbjct: 119 VIQNKRLVGMISEADLARHLSD 140
>gi|149201057|ref|ZP_01878032.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseovarius sp. TM1035]
gi|149145390|gb|EDM33416.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Roseovarius sp. TM1035]
Length = 612
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 34 PSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL 93
P+ QG+ G + + + P+ T V D R M + +V++ + A
Sbjct: 131 PTAQGDDGPYATGLTALQVSDLMTATPITCTPDAT-VKDVARLMRDNVISSVVVME-GAR 188
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L+GI+T +D+ +V+AEGL D V+++MT +P+ + L ++AL + + K HLPV
Sbjct: 189 LAGIITVRDLANKVLAEGLGGD-IRVAQVMTPDPVTIEPGRLGLDALMLLSELKVNHLPV 247
Query: 154 VENGEVIAILDITKCL 169
+ G V+ ++ T
Sbjct: 248 AQGGRVLGMIGKTDLF 263
>gi|89054406|ref|YP_509857.1| signal-transduction protein [Jannaschia sp. CCS1]
gi|88863955|gb|ABD54832.1| putative signal-transduction protein with CBS domains [Jannaschia
sp. CCS1]
Length = 144
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+TI G+ V +A + ++++R+ A++++ ++GI++++DI + + G V
Sbjct: 16 VTIAPGSSVGEAAKTLSAKRIGALVVSSDGTDIAGILSERDIVRAIGSGGPGCLADPVES 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKA 179
+MT I T D + L KM QG+FRH+PV++ ++ ++ I + ++ MEK
Sbjct: 76 LMTSKIISATRDESVEQVLGKMTQGRFRHMPVMDGAAMVGLISIGDVVKAQLAELAMEKE 135
Query: 180 AEQG 183
A +G
Sbjct: 136 ALEG 139
>gi|15679237|ref|NP_276354.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622337|gb|AAB85715.1| inosine-5'-monophosphate dehydrogenase related protein V
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 187
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV S +T G V++A M ++V ++++ +N+ G++T+ DI +V++
Sbjct: 8 TVHDAMTSNVITADPGISVAEAASIMTEKKVGSIIVK-SNSEPEGLITESDIIRKVVSRD 66
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
LR + V ++MTRN I + D EA + M + R LPVV +G ++ IL
Sbjct: 67 LRASEVTVGEVMTRNLISIEPDRELSEAARLMAKNSIRRLPVVRDGALVGIL 118
>gi|296284630|ref|ZP_06862628.1| CBS [Citromicrobium bathyomarinum JL354]
Length = 121
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 86 LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQ 145
++ D+ AL+ G+VTD+DI R +A+G DQ V ++MT +P+ VT+D+ E KM
Sbjct: 11 VVDDSGALV-GVVTDRDIACRCVAKGNSSDQRV-EEVMTSSPVTVTADASVDECCTKMED 68
Query: 146 GKFRHLPVVEN-GEVIAIL 163
+ R LPV+++ G+ I+
Sbjct: 69 NQVRRLPVIDDEGKCCGIV 87
>gi|120610791|ref|YP_970469.1| hypothetical protein Aave_2114 [Acidovorax citrulli AAC00-1]
gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 149
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 60 KALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV 119
+ TI + DA R MA + + A+L+ D + +GIVT++D +V G T V
Sbjct: 15 EVFTIAPSDSMLDALRLMADKGIGALLVMDGERI-AGIVTERDYARKVALLGRTSGDTRV 73
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEK 178
+ +MTR FV + + L M + + RHLPVV E+G ++ ++ I + D IS +
Sbjct: 74 ADVMTRAVRFVRPAQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVKDVISEQQF 133
Query: 179 AAEQ 182
EQ
Sbjct: 134 IIEQ 137
>gi|332306914|ref|YP_004434765.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Glaciecola sp. 4H-3-7+YE-5]
gi|332174243|gb|AEE23497.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Glaciecola sp. 4H-3-7+YE-5]
Length = 636
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 32 KPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDAN 91
+ PSP + + S+ A E+ + +L L +P T V +A RM V +VL+++
Sbjct: 135 RDPSPDKKDNDSLLTAKVEKLIGQL----PLILPPNTSVQEAALRMTEEGVSSVLISNEQ 190
Query: 92 AL-----------------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
+ GIVTD DI +R++A+GL T V+ IMT V S+
Sbjct: 191 VPNNQASTENNDDDTDDEPVIGIVTDVDIRSRLVAQGLDL-STPVTDIMTSQLNTVQSNQ 249
Query: 135 LAIEALQKMVQGKFRHLPVVENGEVIAIL 163
EA+ M++ K HLPV++N I ++
Sbjct: 250 YVFEAMMLMLKHKVMHLPVLKNSRPIGLI 278
>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 158
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V +A + M RV ++++ + L GI+T DI V+A+GL P+ V IMTRNP
Sbjct: 27 TSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGLDPESVRVGDIMTRNP 86
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+V +D A M + HLPV++
Sbjct: 87 YYVYTDDSVERAASLMGEHNIGHLPVLD 114
>gi|127510986|ref|YP_001092183.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
gi|126636281|gb|ABO21924.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
Length = 629
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
VK L A I +G + A MA V A+L+ D + L L GI+TD+D+
Sbjct: 152 VKTLLTRDAPVIHKGESIQQAAIMMAQENVSALLVIDPDVLEDEDGDTSPLLGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+AEG+ P T ++ +++ I + ++ EA+ M++ HLPV + + I I+
Sbjct: 212 CTRVVAEGIDP-ATELAGVVSTEVITLDHNAYVYEAMLTMLRYNVHHLPVCKGRKPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 EAT 273
>gi|448329122|ref|ZP_21518423.1| CBS domain containing protein [Natrinema versiforme JCM 10478]
gi|445614309|gb|ELY67985.1| CBS domain containing protein [Natrinema versiforme JCM 10478]
Length = 134
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V ++ S T+ T+V DA + M + + +V++ D + L GI+T D +++AE
Sbjct: 6 VARVMSSSLHTVTPDTLVEDAAQEMLANEIGSVVVVDDDNRLEGILTTTDFV-KIVAEQK 64
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDA 172
DQT VSK M+ + + VT+ +A MV+ F H+PV++ E + + T L
Sbjct: 65 PKDQTPVSKYMSADVVTVTAQDSIRDAADTMVERGFHHIPVIDEDEGVIGMVTTSDLAGY 124
Query: 173 ISRME 177
+SR++
Sbjct: 125 LSRVQ 129
>gi|448736641|ref|ZP_21718735.1| putative signal transduction protein with CBS domains [Halococcus
thailandensis JCM 13552]
gi|445805913|gb|EMA56101.1| putative signal transduction protein with CBS domains [Halococcus
thailandensis JCM 13552]
Length = 130
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T VS+ +++ V +V++T+ + +GIVTD+D+TTRV+AE IM+ +
Sbjct: 7 TAVSELAQQLRDENVGSVVITNDDNNPTGIVTDRDLTTRVLAEEASSTDQTADDIMSTDL 66
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL---DITKCLYDAISRM 176
V D+ EA Q M + R LPV EN E++ I+ D+T+ L D ++
Sbjct: 67 CVVGPDAGFYEAAQVMSENGVRRLPVCGENDELVGIITADDLTELLSDETQQL 119
>gi|302542661|ref|ZP_07295003.1| putative signal-transduction protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302460279|gb|EFL23372.1| putative signal-transduction protein [Streptomyces himastatinicus
ATCC 53653]
Length = 134
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S LTI + A R M++RRV + ++ D + GI+T++DI + A+ PD
Sbjct: 15 SVVLTIGPAHTLRQAARLMSARRVGSAIVLDPDTSGLGILTERDILNSLGADQ-DPDHET 73
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCL 169
T + +F EA + M QG FRHL V+E GE V+++ DI +C
Sbjct: 74 AHAHTTADAVFAAPGWTLEEAARTMSQGGFRHLIVLEAGEPVGVVSVRDIIRCW 127
>gi|170740037|ref|YP_001768692.1| signal-transduction protein [Methylobacterium sp. 4-46]
gi|168194311|gb|ACA16258.1| putative signal-transduction protein with CBS domains
[Methylobacterium sp. 4-46]
Length = 131
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
++ C RM + V A+ + D L+ GI++++DI RVIA P T+V ++MTR P+
Sbjct: 24 IASVCHRMRALNVGALAVLDEGRLI-GIISERDIARRVIAGHRDPMLTLVREVMTREPLT 82
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ + + EA + M + RHLPV+ + V+ ++ +
Sbjct: 83 IAAQAPLAEAHRLMAERGIRHLPVMRDEAVVGMISL 118
>gi|159039472|ref|YP_001538725.1| signal-transduction protein [Salinispora arenicola CNS-205]
gi|157918307|gb|ABV99734.1| putative signal-transduction protein with CBS domains [Salinispora
arenicola CNS-205]
Length = 138
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV + ++ +T+ + A + M + V++TD ++++ GIVTD+DIT R +AE
Sbjct: 3 TVGEFMTTRLVTMDGNDTLIAAAQEMRDCAIGDVVVTDGDSVV-GIVTDRDITVRAVAEN 61
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ P T +++I +R+ + V+ A+ A M R LPVVE+G++I ++
Sbjct: 62 MNPASTRLNQITSRDVVTVSQYDDAVAAADLMRTYAVRRLPVVEDGQLIGLV 113
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 236 SDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
+D + AA++MR+ ++ G + GI+T +D+ +R VA+N++P T + + R
Sbjct: 18 NDTLIAAAQEMRDCAIGDVVVTDGDSVVGIVTDRDITVRAVAENMNPASTRLNQITSR 75
>gi|336179575|ref|YP_004584950.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
gi|334860555|gb|AEH11029.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
Length = 128
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 56 LRLSKALTIPEGTI-----VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+R+S +T P I + A R MA+R+V A ++ D + I+T++D+ V A
Sbjct: 1 MRVSDGMTSPVLMIGPNHTLRQAARLMAARKVGAAIVRDVDGEGYTILTERDVLMSV-AA 59
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
G PD +V + R+ +F EA M++G FRHL V + G+V +L D+ +
Sbjct: 60 GQNPDVELVGDHVARDVVFADPGWPLTEAAGAMLRGGFRHLIVCDRGDVAGVLSMRDVVR 119
Query: 168 CLYD 171
C D
Sbjct: 120 CWSD 123
>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 194
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TI + + V +A ++A+ V ++ DAN LSG+++++D ++ G T+V +
Sbjct: 57 YTIGDESTVFEAVNKLAAYDVGCLVTKDANGNLSGVISERDYVQKIALLGKSSKDTLVRQ 116
Query: 122 IMTRNPIFVT-SDSLAIEA-LQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAISRMEK 178
I T+ VT S S ++A +QKM+ RHLP+V E+G V+ I+ I + + E
Sbjct: 117 ISTKAADLVTASPSDTVDACMQKMLTRDIRHLPLVDESGAVVGIISIKDLIKTCLEEKEH 176
Query: 179 AAEQGSAIA 187
Q S+ A
Sbjct: 177 VIHQLSSFA 185
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 29 RLMAEKAIGAVLVMEGTRLV-GIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVSPSD 87
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 88 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 32 RLMAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVTVSPSE 90
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 91 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 131
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 29 RLMAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSAEVVTVSPSE 87
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 88 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
>gi|410028903|ref|ZP_11278739.1| putative signal transduction protein [Marinilabilia sp. AK2]
Length = 486
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+ V L L T V + MA RV V + D+ + G VTD + RV+A+
Sbjct: 15 KKVGDLHYRGLLVCNGHTAVHEVAAMMARERVSCVFIGDSEDEIEGFVTDLTLRDRVLAK 74
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ P V ++M ++ ++L EAL +M Q K R+L V E G + + TK L
Sbjct: 75 NINPS-VAVKEVMDSGIFYIDKNALLYEALLQMFQSKIRYLLVKEEGHFVGWISRTKIL 132
>gi|290961286|ref|YP_003492468.1| hypothetical protein SCAB_69351 [Streptomyces scabiei 87.22]
gi|260650812|emb|CBG73929.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 157
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 33 PPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA 92
PP+P+ S + G T + A IP + A + M V A+ ++D N
Sbjct: 2 PPAPRRPSGT---GRYHMTTAGDIMHRGAQWIPAHETLDRAAQLMRQLNVGALPISDQNE 58
Query: 93 LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLP 152
L GI+TD+DI +A G P ++ P ++ +D+ E L++M + R LP
Sbjct: 59 RLCGILTDRDIVVGCVALGHDPSTITAGEMAKGTPRWIAADADVAEVLEEMKGHQIRRLP 118
Query: 153 VVENGEVIAIL---DITKCLYD 171
V+EN ++ ++ D+ + L D
Sbjct: 119 VIENKRLVGMISEADLARHLSD 140
>gi|359451697|ref|ZP_09241095.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
gi|358042519|dbj|GAA77344.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20480]
Length = 631
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ V + + M V +VL+TD N +S GI+TDK
Sbjct: 152 VKSLLHRDVVTVDATETVKNIAQLMTDESVSSVLVTDINKPISNDPQEDDGQVVGIITDK 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ T+V+A+GL T IM+ N + + + EA+ M++ HLPVV+ I
Sbjct: 212 DLRTKVVAQGLEY-TTPAHVIMSTNLVLLDQNDYIFEAVLAMLRDNLHHLPVVQKKRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|343515800|ref|ZP_08752849.1| hypothetical protein VIBRN418_05216 [Vibrio sp. N418]
gi|342797614|gb|EGU33258.1| hypothetical protein VIBRN418_05216 [Vibrio sp. N418]
Length = 629
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 76 RMASRRVDAVLLTDANAL---------LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
+MA V ++L+ D + L GI+TD+D+ TRV+A+GL P V S +MT
Sbjct: 175 KMAEENVSSLLIIDPDIAQNDDDDGSGLVGIITDRDLCTRVLAQGLNPHDAVAS-VMTSE 233
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDIT 166
I + ++ EA+ M++ HLPV+++ I I++ T
Sbjct: 234 VISLDHNAYVYEAMLTMLRYNVHHLPVLKDRHPIGIIETT 273
>gi|358344530|ref|XP_003636342.1| hypothetical protein MTR_037s0033 [Medicago truncatula]
gi|355502277|gb|AES83480.1| hypothetical protein MTR_037s0033 [Medicago truncatula]
Length = 67
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
Query: 58 LSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
L K TI +G VSDACRRMA+R VD VLLTDAN D TRVIAEGL
Sbjct: 23 LFKLTTISKGKSVSDACRRMAARHVDVVLLTDAN----------DNATRVIAEGL 67
>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
Length = 140
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R + +++ S +I V DA R MA + V A+++ + + ++ GI++++D ++I
Sbjct: 6 RHILEVKGSDVWSIGPDATVFDALRMMADKDVGALVVMENDKVV-GIISERDYARKIILH 64
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
G +T+V +IM+ N V D EA++ M + RHLPV+E ++ ++ I +
Sbjct: 65 GKSSKETLVREIMSTNLYTVHPDQTVEEAMEIMTNKRVRHLPVMEGETLLGMISIGDVVK 124
Query: 171 DAISR 175
+ I R
Sbjct: 125 NIIYR 129
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
K T+ V DA + MA + + A+L+ D + GI++++D T +++ P +T
Sbjct: 14 HKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFV-GIISERDCTRKMLLADRLPRETP 72
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
V IM+ +V E + M + RHLPV++NG++I ++ I + D IS
Sbjct: 73 VRDIMSSPVQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIGDLVKDIISEQGF 132
Query: 179 AAEQGSAIAAAVEG 192
+Q A V+G
Sbjct: 133 IIQQLEHYIAGVKG 146
>gi|386287148|ref|ZP_10064323.1| cyclic nucleotide-binding protein [gamma proteobacterium BDW918]
gi|385279680|gb|EIF43617.1| cyclic nucleotide-binding protein [gamma proteobacterium BDW918]
Length = 626
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLT----DAN---ALLSGIVTDKDITTRVIAEGLRP 114
+T+ T V A RM V ++L+T D++ A + GIVTD DI R++A GL
Sbjct: 161 VTVSSTTTVHQAAIRMTEENVSSLLITLDEQDSSGRPAQVVGIVTDLDIRGRLVAMGLSS 220
Query: 115 DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG---EVIAILDITK 167
D V+ IMT I+V S +A+ M++ K +HLPV++ G +I+ LDI +
Sbjct: 221 D-IPVADIMTTELIYVQSHQFVFDAMMLMLKYKVQHLPVLKKGVPVGLISHLDILR 275
>gi|408380806|ref|ZP_11178356.1| signal transduction protein with CBS domains [Methanobacterium
formicicum DSM 3637]
gi|407816071|gb|EKF86633.1| signal transduction protein with CBS domains [Methanobacterium
formicicum DSM 3637]
Length = 186
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV S +T+ T ++ A M+ + + ++++ +N+ G++T+ DI T+V++
Sbjct: 8 TVHDAMTSSVITVDPETSIAQAAAIMSQKGIGSLIIR-SNSEPEGLITESDIITKVVSMD 66
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
++ Q V+++MTR+ I +T S EA + M + K R LPVV NG ++ IL
Sbjct: 67 IQASQITVAEVMTRDLIKITPGSELNEAARTMAKNKIRRLPVVNNGVLVGIL 118
>gi|89071163|ref|ZP_01158356.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
gi|89043289|gb|EAR49514.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
Length = 144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LT+ G V++A ++ ++V AV++++ + GI++++DI + G Q V
Sbjct: 16 LTLAPGKSVAEAVAFLSDKKVGAVVISEDGRVPLGILSERDIVRELGRRGAECLQDGVHD 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKA 179
+MT T A + L+ M G+FRHLPV+EN E++ ++ I + +S MEK
Sbjct: 76 MMTDKLTTCTPHDSADQVLEMMTTGRFRHLPVMENDEMVGLISIGDVVKARLSELAMEKD 135
Query: 180 AEQG 183
A +G
Sbjct: 136 ALEG 139
>gi|319650833|ref|ZP_08004970.1| hypothetical protein HMPREF1013_01576 [Bacillus sp. 2_A_57_CT2]
gi|317397431|gb|EFV78132.1| hypothetical protein HMPREF1013_01576 [Bacillus sp. 2_A_57_CT2]
Length = 636
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK-IM 123
P+ +I +A + M +R++ ++L+ + + LL GI+T++DI RV A G D + ++ IM
Sbjct: 188 PDASI-QEAAKLMHNRKISSILVAENDCLL-GIITERDIVERVAAAG--ADLSAQARTIM 243
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
T NP+ ++ + EAL ++ +HLPV E+ +V+ I+ ++ L
Sbjct: 244 TENPVTISRFAYYYEALSLILFKGVKHLPVKEDSKVVGIVTLSDLL 289
>gi|386386761|ref|ZP_10071870.1| hypothetical protein STSU_25929 [Streptomyces tsukubaensis
NRRL18488]
gi|385665769|gb|EIF89403.1| hypothetical protein STSU_25929 [Streptomyces tsukubaensis
NRRL18488]
Length = 139
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T K + A IP + A + MA V A+ + DA L GI+TD+DI +A G
Sbjct: 3 TAKDIMHPGAQWIPAHETLDRAAQLMARLDVGALPIADAQERLCGILTDRDIVVGCVALG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P + ++ P ++ ++S E LQ+M + + R LPV+E +++ ++ D+ +
Sbjct: 63 HDPAKVTAGEMARGTPRWIAAESGVGEVLQEMQEHQIRRLPVIEGKKLVGMISEADLAQH 122
Query: 169 LYD 171
L D
Sbjct: 123 LSD 125
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V DA +A V A+++ D + L+ G ++++D T +V +G + VS+IMT +
Sbjct: 22 TSVFDALATLARFEVGALMVMDGDRLV-GFLSERDYTRKVALQGKNSKEMKVSEIMTPDV 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
+ VT + + M Q KFRHLPVV+ +V+ ++ I + D I+ E+ Q
Sbjct: 81 MTVTPQTRTRACMALMSQRKFRHLPVVDGAKVVGMISIQDLMDDIIADHEETIAQ 135
>gi|146277434|ref|YP_001167593.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555675|gb|ABP70288.1| CBS domain containing protein [Rhodobacter sphaeroides ATCC 17025]
Length = 144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P G+ V+ A ++SRR+ AV+++ G+++++DI + G V
Sbjct: 16 VTVPPGSSVAQAAEVLSSRRIGAVVVSRDGKRPDGMLSERDIVRELGRRGPGCLSDTVES 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
IMT + A +Q M +G+FRHLPV+ GE++ ++ D+ K +S MEK
Sbjct: 76 IMTSKIVTCACSDEADGIMQIMTEGRFRHLPVMAEGEMVGLISIGDVVKARLSELS-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 146
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA + MA + + A+L+ + +A++ GIVT++D ++ +G T V +MT + +F
Sbjct: 25 VFDALKCMADKGIGALLVMEGDAIV-GIVTERDYARKIALKGRTSALTQVRDVMTTSVMF 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ 182
V + E + M + RHLPVV++ ++ ++ I + D IS + EQ
Sbjct: 84 VQPTQTSEECMALMTDNRLRHLPVVQDNRLVGLISIGDLVKDIISEQKFVIEQ 136
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSK 121
PE T+ DA + R+ A+L D L+GI++++DI R +A+ +P +T+ V +
Sbjct: 50 PEQTL-HDAVVLLRDNRIGALLCVDEEGKLAGILSERDIV-RKLAD--QPGKTLPHRVEE 105
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+MTR T+D + L+ M +G+FRH+PVV+ +I ++ I ++ ++++E A
Sbjct: 106 VMTRTVETCTADEPLVVVLRLMTEGRFRHMPVVDGDALIGMITIGDVVHFRLNQLELEAL 165
Query: 182 Q 182
Q
Sbjct: 166 Q 166
>gi|325968392|ref|YP_004244584.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323707595|gb|ADY01082.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 147
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
++ A +M V ++L+ D + +GI T++D+ RV+AEG+ D T + K+M++ I
Sbjct: 39 ITCAVAKMYMHNVGSILIIDEDGKPTGIFTERDLV-RVVAEGISLD-TPLMKVMSKKLIT 96
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
+ I A KM++ RHLPVVE G+ + ++ I
Sbjct: 97 ANTSESVISAAMKMIENNIRHLPVVEEGKTVGMVSI 132
>gi|399545733|ref|YP_006559041.1| arabinose 5-phosphate isomerase KdsD [Marinobacter sp. BSs20148]
gi|399161065|gb|AFP31628.1| Arabinose 5-phosphate isomerase KdsD [Marinobacter sp. BSs20148]
Length = 326
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+ EGT +S A ++ + + + D+N LL G+ TD D+ R + + + T + ++M
Sbjct: 216 VSEGTTLSGALLEISRKGLGMTTVVDSNGLLIGVFTDGDLR-RSLDKNVDVHTTAIEQLM 274
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
T N + +D LA+EAL M + K LPVV E+GE++ L++ L
Sbjct: 275 THNGKTIRADQLAVEALNIMEEMKISALPVVGEHGELVGALNMHDLL 321
>gi|294812311|ref|ZP_06770954.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294324910|gb|EFG06553.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 188
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T K + + A IP + A + M V A+ + D+N L GI+TD+DI +A G
Sbjct: 52 TAKDIMHAGAQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDIVVGCVAVG 111
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P + + P ++ + S + LQ+M + R LPV+EN ++ ++ D+ +
Sbjct: 112 HDPSKVTAGDLARGTPRWIDAGSGVEDVLQEMEGHQIRRLPVIENKRLVGMISEADLARH 171
Query: 169 LYD 171
L D
Sbjct: 172 LSD 174
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
R MA + + AVL+ + L+ GIV+++D +V+ T V++IM+ + V+
Sbjct: 29 RLMAEKAIGAVLVMEGPRLV-GIVSERDYARKVVLRDRSSSTTSVAQIMSGEVVTVSPSE 87
Query: 135 LAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDA 172
+Q M G+FRHLPVVENG VI+I D+ K + +A
Sbjct: 88 TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEA 128
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
S TI V +A R MA + + A+++TD +++ +GIVT++D +++ T
Sbjct: 15 SDVYTIGADDSVYEAIRLMAEKGIGALVVTDGDSI-AGIVTERDYARKIVLMDRSSKATP 73
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEK 178
V IM++ FV D E + M + + RHLPV++N +I ++ I + D I+ +
Sbjct: 74 VRDIMSKAVRFVRPDQTTEECMALMTERRMRHLPVIQNDRLIGMVSIGDLVKDIIAEQQF 133
Query: 179 AAEQ 182
+Q
Sbjct: 134 TIQQ 137
>gi|402703556|ref|ZP_10851535.1| KpsF protein [Rickettsia helvetica C9P9]
Length = 319
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVV---S 120
+ E T ++ M +R+ L+TD N L GI+TD D+ + DQ + S
Sbjct: 212 VYEDTSFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGDLRRHI------NDQIHLKTAS 265
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
IMT+NPI ++SD A EAL M ++P+V++ +I I+ I L
Sbjct: 266 SIMTKNPIHISSDIFAKEALNLMKTKNITNIPIVDDNVIIGIIHIHDLL 314
>gi|27380662|ref|NP_772191.1| hypothetical protein bll5551 [Bradyrhizobium japonicum USDA 110]
gi|27353827|dbj|BAC50816.1| bll5551 [Bradyrhizobium japonicum USDA 110]
Length = 142
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTVVSKIMTRNPIFVT 131
A + + +++ AVL+ + + L GI++++DI RVI E G VS++MTR +
Sbjct: 26 AIKLLGEKKIGAVLVMN-QSRLEGILSERDIV-RVIGERGAGALDEPVSQVMTRKVVTCK 83
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
E ++ M GKFRHLPV++NG+V+ ++ I
Sbjct: 84 ETDTVAELMETMTTGKFRHLPVIDNGKVVGLISI 117
>gi|398828308|ref|ZP_10586509.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
gi|398218343|gb|EJN04853.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
Length = 143
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T P+ T+ +DA +A ++ A+++ D N + GI++++D+ + A+G +S+I
Sbjct: 17 TNPDMTL-ADAITVLAKYKIGAIVVCDDNKAIKGILSERDVVRAIAADGADALWKPISEI 75
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRMEKA 179
MT T + + ++ M QG+FRHLPV ++G +++I D+ K + + R ++
Sbjct: 76 MTIKVKVCTENHTINQVMETMTQGRFRHLPVEKDGRLHGIVSIGDVVKLRIEEVER--ES 133
Query: 180 AEQGSAIAAA 189
E S IA A
Sbjct: 134 QEIRSYIATA 143
>gi|296271229|ref|YP_003653861.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296094016|gb|ADG89968.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 145
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+TD+DI + AEG+ D+T V + + I+V + EALQKM Q + + LPV
Sbjct: 51 LKGIITDRDIVVKCCAEGVDLDRTTVGQCAQGSLIWVDAQCSVEEALQKMEQHQIKRLPV 110
Query: 154 VENGEVIAIL 163
+EN ++ ++
Sbjct: 111 IENKRLVGMI 120
>gi|448711490|ref|ZP_21701320.1| signal transduction protein with CBS domains [Halobiforma
nitratireducens JCM 10879]
gi|445791688|gb|EMA42323.1| signal transduction protein with CBS domains [Halobiforma
nitratireducens JCM 10879]
Length = 140
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
++ L S +T E V + M V ++++TD + + GIVTD+D+ TRV+ G+
Sbjct: 3 IENLARSDVVTAQEDDSVEELATHMEESHVGSIVVTDGDEPI-GIVTDRDLATRVLGNGM 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYD 171
P + +M+ +P V D+ +A + M + R LPV ++ E++ I+ YD
Sbjct: 62 DPSEATARDVMSDDPATVDHDAGFYQATEMMSEHGVRRLPVCNDSNELVGII-----TYD 116
Query: 172 AISRM 176
+S +
Sbjct: 117 DLSEL 121
>gi|390948681|ref|YP_006412440.1| putative signal transduction protein [Thiocystis violascens DSM
198]
gi|390425250|gb|AFL72315.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thiocystis violascens DSM 198]
Length = 626
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T P+ T + +A R M+ +V ++++ D L +G++TD+D+ R IA GL P V +
Sbjct: 171 VTAPD-TSIREAARIMSEHQVSSLIVMDGERL-AGMITDRDLRGRCIAAGL-PTDRPVRE 227
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITK 167
IMT V D+L +AL M + HLPV++ G V +L D+T+
Sbjct: 228 IMTEKLKTVDMDTLGFQALIAMTRLNVHHLPVLDEGRVAGLLSSTDLTR 276
>gi|282163492|ref|YP_003355877.1| hypothetical protein MCP_0822 [Methanocella paludicola SANAE]
gi|282155806|dbj|BAI60894.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 152
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
VK + +TI V+DA R+M V +V++ D NA+ GIVTD+ I T IAE
Sbjct: 3 VKDIMSKDVVTIGADASVADAARKMKEADVGSVVVLDKNAV-KGIVTDRKIVTNCIAENK 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITK---- 167
P + + I +++ I + DS +AL + + K R PVV + E++ +L +
Sbjct: 62 DPGREHIGNITSKSMITCSEDSDVHDALMTLGKNKIRRCPVVNDRKELVGVLSVADIAGE 121
Query: 168 ---C---LYDAISR 175
C L+D +S+
Sbjct: 122 MRGCMDALFDGLSK 135
>gi|269968065|ref|ZP_06182102.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827311|gb|EEZ81608.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 620
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G++TD+D+T RVIA+GL VV ++M+ +P + D L + A M+Q R+LP+V
Sbjct: 200 GLITDRDMTKRVIAKGLSISTPVV-EVMSPDPKTIHPDDLVLHAASIMMQHNIRNLPLVR 258
Query: 156 NGEVIAILDITKCLYD----AISRMEKAAEQGSAIAAAVEGVERQ 196
+ V+ +L T + + AI +EK GS A + ERQ
Sbjct: 259 DNNVVGVLTTTHLVQNHRVQAIFLIEKIKYAGSVKALSSFTSERQ 303
>gi|237654401|ref|YP_002890715.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237625648|gb|ACR02338.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 144
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V + R+M + + A L+T+ + +L+GI T++D V+A GL D T V +MT NP
Sbjct: 22 TPVREVVRQMNALQRSAALVTE-HGVLTGIFTERDAAFGVLAAGLDADTTPVGAVMTHNP 80
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVE 155
+ +T D AL M + RH+P+V+
Sbjct: 81 VTLTEDRPFGHALHLMYENGVRHVPIVD 108
>gi|119871878|ref|YP_929885.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
gi|119673286|gb|ABL87542.1| putative signal-transduction protein with CBS domains [Pyrobaculum
islandicum DSM 4184]
Length = 139
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ D +M +V +V++ D GI+T++D+ V+A L PD T +MT NPI
Sbjct: 30 IKDIAIKMYENKVGSVVIVDEEGKPVGIITERDLVY-VVARSLAPD-TPAWMVMTENPIV 87
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAIL 163
+ D+L EA++KM RHLPVV+ +G ++ +L
Sbjct: 88 IREDALITEAMEKMRVQNIRHLPVVDTSGRLVGML 122
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIA--EGLRPDQTVVSKI 122
P+GT V +A + M + +V++ + L GIVT++D+ TR IA +G RP+ VS+I
Sbjct: 31 PDGT-VYEAAKLMKENNIGSVVIMEEGEL-RGIVTERDLITRYIAAEDGRRPEDVKVSEI 88
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAIL---DITKC 168
MT++PI + ++ EA + M++ R L VV +G V+ I+ DI K
Sbjct: 89 MTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILKV 138
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 70 VSDACRRMASRRVDAVLL--TDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V DA + M V A+++ +DAN ++GI+T++D ++I +G T V IMT
Sbjct: 80 VYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
Query: 128 --IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSA 185
I VT D+ ++A+Q M + RH+PV++ ++ ++ I + + + E+ +A
Sbjct: 140 KLITVTPDTKVLQAMQLMTDKRIRHIPVIDEKGMVGMVSIGDVVRAVVREHRQEVERLNA 199
Query: 186 I 186
Sbjct: 200 F 200
>gi|346993348|ref|ZP_08861420.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 174
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 65 PEGTI--VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---V 119
P TI V D R +R+ AV++TD N L GI++++DI R +AE P QT+ V
Sbjct: 51 PNDTIHSVVDILR---EKRIGAVVVTDQNGSLQGILSERDIVRR-MAE--TPGQTLPQSV 104
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKA 179
+ +MT + D + L+ M +G+FRH+PV+ +G + ++ I ++ + +E
Sbjct: 105 ADLMTTEVKTCSPDDYLNDVLKTMTEGRFRHMPVLSDGNLRGVITIGDVVHFRLKELEYE 164
Query: 180 A 180
A
Sbjct: 165 A 165
>gi|345302629|ref|YP_004824531.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Rhodothermus marinus
SG0.5JP17-172]
gi|345111862|gb|AEN72694.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Rhodothermus marinus
SG0.5JP17-172]
Length = 644
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V +A R M + R+ ++L+ DA GI+T+ D+ +V+AEG PD V +M+
Sbjct: 175 PE-TPVQEAARIMRAERIGSILVMDAERRPVGILTNSDLRDKVVAEGRLPDMP-VEALMS 232
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
P+ + +D+ +E L M + F HL + E+G
Sbjct: 233 APPVTIAADAPILEGLVLMARHGFHHLVLTEDG 265
>gi|170290719|ref|YP_001737535.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170174799|gb|ACB07852.1| putative signal-transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 144
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 56 LRLSKALTIPEGTI-----VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
LR+ +T P TI V +A + M +R+ ++L+ D N L GI TD+D+ A
Sbjct: 12 LRVEDVMTTPAVTIKMDASVEEAAKIMDEKRISSILVVDNNGKLVGIFTDRDLRFAA-AN 70
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIAILDI 165
G + +MT NPI + + EAL+KM +HLPVV+ VIA+ D+
Sbjct: 71 GKIGKGIPIHMLMTENPITIAPNEPITEALRKMRDADVKHLPVVDKENKPVGVIAVRDV 129
>gi|85373724|ref|YP_457786.1| hypothetical protein ELI_04485 [Erythrobacter litoralis HTCC2594]
gi|341615026|ref|ZP_08701895.1| CBS [Citromicrobium sp. JLT1363]
gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
Length = 147
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
K + S T V +A M + + D + L G++TD+DI R +A+G
Sbjct: 4 KNVMTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRDIACRCVADGKS 63
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
D T V +MT +PI VT D+ + KM K R LPVV E+G+ I+
Sbjct: 64 SD-TSVEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDESGKCCGIV 113
>gi|268317662|ref|YP_003291381.1| CBS domain and cyclic nucleotide- regulated nucleotidyltransferase
[Rhodothermus marinus DSM 4252]
gi|262335196|gb|ACY48993.1| putative CBS domain and cyclic nucleotide- regulated
nucleotidyltransferase [Rhodothermus marinus DSM 4252]
Length = 644
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V +A R M + R+ ++L+ DA GI+T+ D+ +V+AEG PD V +M+
Sbjct: 175 PE-TPVQEAARIMRAERIGSILVMDAERRPVGILTNSDLRDKVVAEGRLPDMP-VEALMS 232
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
P+ + +D+ +E L M + F HL + E+G
Sbjct: 233 APPVTIAADAPILEGLVLMARHGFHHLVLTEDG 265
>gi|334341972|ref|YP_004546952.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093326|gb|AEG61666.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 146
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
+++K + TI +A R M+ V ++ + + N G++TD+DIT R+ ++
Sbjct: 3 QSLKDIMTQNVATIGPDQSAQEAARLMSQHNVGSIPVVE-NGKCVGMITDRDITLRITSQ 61
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
GL P T V IMT + + + +A M + + R LPVVENG+V ++
Sbjct: 62 GLDPQSTQVQSIMTTDVVTGAPEMDVHQAANLMAERQIRRLPVVENGQVTGMV 114
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 219 SLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
SL I+T+N VA + P AA+ M + S +V K G++T +D+ +R+ +Q
Sbjct: 4 SLKDIMTQN--VATIGPDQSAQEAARLMSQHNVGSIPVVENGKCVGMITDRDITLRITSQ 61
Query: 279 NLSPELTLVERFI 291
L P+ T V+ +
Sbjct: 62 GLDPQSTQVQSIM 74
>gi|220932726|ref|YP_002509634.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
gi|219994036|gb|ACL70639.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
Length = 331
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 67 GTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRN 126
GT V +A M + ++ + + D L GI+TD DI R++ E Q V ++MT++
Sbjct: 225 GTSVKEALFTMTASKMGSTSVVDERGRLVGIITDGDIR-RLLEESTDFLQKPVLEVMTKD 283
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
PI + D LA EAL+ M + LPVVE+G+ + +L+ L
Sbjct: 284 PITIEKDRLAAEALKIMEDKEVNDLPVVEDGKPVGMLNFQDLL 326
>gi|359441578|ref|ZP_09231471.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20429]
gi|392532797|ref|ZP_10279934.1| hypothetical protein ParcA3_02100 [Pseudoalteromonas arctica A
37-1-2]
gi|358036598|dbj|GAA67720.1| CBS domain-containing protein [Pseudoalteromonas sp. BSi20429]
Length = 631
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLS-----------GIVTDK 101
VK L +T+ + + D + M V +VL+TD N ++ GI+TD+
Sbjct: 152 VKSLIHRDVVTVDATSTIQDIAKLMTEEAVSSVLVTDVNKPINDDPEEDDGQVVGIITDR 211
Query: 102 DITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIA 161
D+ ++V+A+GL + T +IM+ N + + ++ EA+ M++ HLPVV+ I
Sbjct: 212 DLRSKVVAKGLDFN-TQAKEIMSTNLVLLDANDYIFEAVLAMLRDNLHHLPVVQKRRPIG 270
Query: 162 ILDITKCL 169
++ ++ L
Sbjct: 271 VISLSDIL 278
>gi|418056360|ref|ZP_12694413.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353209579|gb|EHB74982.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 143
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTVVSKIM 123
PE +I + R++SR++ A+++ + ++GI++++DI R+IAE G + S+ M
Sbjct: 19 PEDSI-QEIALRLSSRKIGAIVIVGDSGKVAGIISERDII-RLIAEHGADALKMPASRGM 76
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
TR+ + T S E ++ M G+FRHLPV+E+ ++ I+ I
Sbjct: 77 TRDVVSCTKTSTIEEIMETMTHGRFRHLPVIEDDVLVGIVSI 118
>gi|352682333|ref|YP_004892857.1| hypothetical protein TTX_1139 [Thermoproteus tenax Kra 1]
gi|350275132|emb|CCC81779.1| CBS domain [Thermoproteus tenax Kra 1]
Length = 136
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V + + + +T + T + + M +R+ +V++TD + ++GIVT++D+ A G+
Sbjct: 10 VSDVMVREVVTAGKNTPLREVANTMYEKRIGSVVITDESGRVAGIVTERDVVY-ACARGM 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCL 169
PD + IMT +PI + ++ +EA++KM RHLPVV+ G I IL + L
Sbjct: 69 SPDSP-IWMIMTESPITIEPEAPLLEAVEKMRNLNARHLPVVDKEGRPIGILSMRDVL 125
>gi|237755790|ref|ZP_04584392.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692053|gb|EEP61059.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 600
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 19 KRTSSSENGGNLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMA 78
K + +E G K + + SS + VK++ L + + + + T + DA + M
Sbjct: 107 KLVNENERFGEYFKKSTKEKLSSIASENPYFFLKVKEIELQQPVIVSKDTTIYDAVKEMT 166
Query: 79 SRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIE 138
+ +V++ N GI+TD DI +VI + + + V KI T+ I + +DS +
Sbjct: 167 EKGAYSVIVDFRNGEY-GIITDSDIRKKVILQNISASENV-EKIATKGLITINADSFLFD 224
Query: 139 ALQKMVQGKFRHLPVVENGEVIAILD 164
A+ M++ + + V ENG++I IL+
Sbjct: 225 AIFLMIKHNIKRVVVEENGKIIGILN 250
>gi|386360663|ref|YP_006058908.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383509690|gb|AFH39122.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRM + ++L+ GI+TD+D+ RV+AEGL P T V ++ TR
Sbjct: 157 VEEAARRMREEGISSLLVRGEPL---GILTDRDLRNRVLAEGL-PPSTPVGQVATRPTFT 212
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+ +EA+ M++ + HLP+ V+ ++ T L
Sbjct: 213 LPADTPLLEAVAAMLERRIHHLPLTRGEAVVGVVTHTDLL 252
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 213 ERMFKPSLSTIITENAK--VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
ER+ +P L+ + E + V P+ V AA++MRE S+L+V G + GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMRE-EGISSLLVRGEPL-GILTDRD 186
Query: 271 VLMRVVAQNLSP 282
+ RV+A+ L P
Sbjct: 187 LRNRVLAEGLPP 198
>gi|381190511|ref|ZP_09898033.1| cyclic nucleotide binding protein/CBS domain-containing protein
[Thermus sp. RL]
gi|380451766|gb|EIA39368.1| cyclic nucleotide binding protein/CBS domain-containing protein
[Thermus sp. RL]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRM + ++L+ GI+TD+D+ RV+AEGL P T V ++ TR
Sbjct: 157 VEEAARRMREEGISSLLVRGEPL---GILTDRDLRNRVLAEGL-PPSTPVGQVATRPTFT 212
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+ +EA+ M++ + HLP+ V+ ++ T L
Sbjct: 213 LPADTPLLEAVAAMLERRIHHLPLTRGEAVVGVVTHTDLL 252
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 213 ERMFKPSLSTIITENAK--VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
ER+ +P L+ + E + V P+ V AA++MRE S+L+V G + GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMRE-EGISSLLVRGEPL-GILTDRD 186
Query: 271 VLMRVVAQNLSP 282
+ RV+A+ L P
Sbjct: 187 LRNRVLAEGLPP 198
>gi|323497525|ref|ZP_08102543.1| hypothetical protein VISI1226_01010 [Vibrio sinaloensis DSM 21326]
gi|323317608|gb|EGA70601.1| hypothetical protein VISI1226_01010 [Vibrio sinaloensis DSM 21326]
Length = 557
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ + M +R ++ + N ++ G++TD+D+T RVIA G D + +MT +P
Sbjct: 112 IREVAHTMLVQRSPCAVIYEDNQIV-GLITDRDMTKRVIAVGASTDGPI-RDVMTHSPQT 169
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD----AISRMEKAAEQGSA 185
V D L + A M+Q R+LPVV++ +V+ +L T + + AI +EK GS
Sbjct: 170 VKPDDLVLHAASIMMQSNIRNLPVVQDNKVVGLLTTTHLVQNHRVQAIFLIEKIKYAGSV 229
Query: 186 IAAAVEGVERQ 196
+ + ERQ
Sbjct: 230 KSLSSFTPERQ 240
>gi|116626523|ref|YP_828679.1| signal-transduction protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229685|gb|ABJ88394.1| putative signal-transduction protein with CBS domains [Candidatus
Solibacter usitatus Ellin6076]
Length = 141
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ ++ E V+ R MA +V A+L+ + L +GI +++D+ TR++ E PD T
Sbjct: 11 CQLFSVEEHQSVAQVARVMAGFKVGAILVLKGDDL-AGIFSERDLMTRIVLERRDPDLTP 69
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
V +MT + + + EA++ M RHLPV +G V+A L
Sbjct: 70 VRDVMTTDVCTIDESATPEEAMEAMQANNCRHLPVTRDGRVVAFL 114
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + A I + V A R MA V ++++ D N + GI+TD+DI + IA+G
Sbjct: 3 TARDIMKPGAQWIAKDETVGKAARVMAELGVGSLVIADDNDRMCGIITDRDIVVKCIAQG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P T +++ P +V +D+ E L +M + + +PV+E+ ++ ++ D+ +
Sbjct: 63 RSPGTTRAAELCESTPRWVAADADIEEVLDEMESHRIKRMPVIEDKRLVGMISEADLARH 122
Query: 169 LYD 171
L D
Sbjct: 123 LDD 125
>gi|54022043|ref|YP_116285.1| hypothetical protein nfa790 [Nocardia farcinica IFM 10152]
gi|54013551|dbj|BAD54921.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 156
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + A I + V A + MA V ++++ D N + GIVTD+DI + +A G
Sbjct: 20 TARDIMKPGAQWISKQDTVERAAQLMADLGVGSLVVADENERMCGIVTDRDIVVKCVAHG 79
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P T +++ P +V +D+ E L M + + +PV+EN ++ ++ D+ +
Sbjct: 80 ANPATTPAAELCEATPRWVAADADVEEVLDAMENHRVKRMPVIENKRLVGMISEADLARH 139
Query: 169 LYD 171
L D
Sbjct: 140 LDD 142
>gi|448306793|ref|ZP_21496696.1| signal transduction protein with CBS domains [Natronorubrum
bangense JCM 10635]
gi|445597304|gb|ELY51380.1| signal transduction protein with CBS domains [Natronorubrum
bangense JCM 10635]
Length = 134
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V ++ S T+ T+V DA + M + +V++ D + L+GI+T D +++AE
Sbjct: 6 VARIMSSSVHTVSPDTLVEDAGKLMLEEDIGSVMVVDEDNQLAGILTTTDFV-QIVAERK 64
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE-VIAILDITKCLYD 171
DQT VS MT++ I V++ +A MV+ F H PVV+ E VI +L T L
Sbjct: 65 PKDQTPVSTYMTQDVITVSAQDDIRDAADVMVEHGFHHTPVVDEDEGVIGML-TTSDLTS 123
Query: 172 AISRME 177
+SR E
Sbjct: 124 YLSRAE 129
>gi|88797052|ref|ZP_01112642.1| cyclic nucleotide binding protein/2 CBS domains [Reinekea
blandensis MED297]
gi|88779921|gb|EAR11106.1| cyclic nucleotide binding protein/2 CBS domains [Reinekea sp.
MED297]
Length = 651
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 70 VSDACRRMASRRVDAVLLTD-----------ANALLSGIVTDKDITTRVIAEGLRPDQTV 118
V + ++M +RV +V++ D A L +GIVTD+D+ RVIAE L P T
Sbjct: 190 VHECAQKMTEQRVSSVVVFDQVGDHEDRDGDAVHLPAGIVTDRDLRMRVIAEAL-PYDTP 248
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ IM+ + I V D+ EA+ M++ HLP+V +V A++
Sbjct: 249 LRDIMSTDLITVGHDAYVYEAMLLMLRHNVHHLPLVRRHQVTAVV 293
>gi|384431006|ref|YP_005640366.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus thermophilus
SG0.5JP17-16]
gi|333966474|gb|AEG33239.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus thermophilus
SG0.5JP17-16]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A RRM + + LL L GI+TD+D+ RV+AEGL P T V ++ TR
Sbjct: 157 VEEAARRMREEGISS-LLVRGEPL--GILTDRDLRNRVLAEGL-PPSTPVGQVATRPTFT 212
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
+ +D+ +EA+ M++ + HLP+ V+ ++ T L
Sbjct: 213 LPADTPLLEAVAAMLERRIHHLPLTRGEAVVGVVTHTDLL 252
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 213 ERMFKPSLSTIITENAK--VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKD 270
ER+ +P L+ + E + V P+ V AA++MRE S+L+V G + GILT +D
Sbjct: 129 ERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMRE-EGISSLLVRGEPL-GILTDRD 186
Query: 271 VLMRVVAQNLSP 282
+ RV+A+ L P
Sbjct: 187 LRNRVLAEGLPP 198
>gi|284033677|ref|YP_003383608.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812970|gb|ADB34809.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 139
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T ++L A + E + DA R+M V ++ + + L G++TD+DI + +A+G
Sbjct: 3 TARELMTPGAECVGENETLVDAARKMRDLDVGSLPICGEDNRLKGMLTDRDIVVKCLADG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
P Q + P+ + +D EAL+ M + + R LPV++ +++ +L
Sbjct: 63 GDPTQVTAGSLGEGKPVTIGADDSIEEALRTMAEHQVRRLPVIDGHDLVGML 114
>gi|54303406|ref|YP_133399.1| hypothetical protein PBPRB1739 [Photobacterium profundum SS9]
gi|46916836|emb|CAG23599.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 622
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
RTV ++ + + T + D + M ++ + + + G+VTD+D+T V+A
Sbjct: 156 RTVGEVASENITIVDDSTSIQDVAKTMCGKQRSSCAVVMNKGEIVGMVTDRDMTRNVVAA 215
Query: 111 GLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLY 170
+ + + SK+M +PI + SD I+A+ M+Q R LPV+++G+V +L T ++
Sbjct: 216 EIDTNLPI-SKVMNPSPILIQSDDKVIQAISLMLQFNIRCLPVLKDGKVTGLLTTTHLVH 274
Query: 171 D 171
+
Sbjct: 275 N 275
>gi|54309682|ref|YP_130702.1| hypothetical protein PBPRA2518 [Photobacterium profundum SS9]
gi|46914120|emb|CAG20900.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 629
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---------LSGIVTDKDI 103
V+ L A + + + A +MA V ++L+ D + L + GI+TD+D+
Sbjct: 152 VRSLLTRDAPFVYKNESIQQAAIKMADESVSSLLIIDPDILDDNENDTSSVIGIITDRDL 211
Query: 104 TTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
TRV+A G+ P+ TV S +MT I + ++ EA+ M++ HLP+ ++ + I I+
Sbjct: 212 CTRVLASGIDPNDTVES-VMTNEVISLDHNAYVYEAMLTMLRFNVHHLPIFKDKKPIGII 270
Query: 164 DIT 166
+ T
Sbjct: 271 ETT 273
>gi|395497949|ref|ZP_10429528.1| hypothetical protein PPAM2_17784 [Pseudomonas sp. PAMC 25886]
Length = 146
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 63 TIPEGTIVSDACRRMASRRVDAV-LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TIP V +A MAS+ V A+ +L D + GI++++D +VI GL T +
Sbjct: 20 TIPHDHTVFEALIVMASKNVGALPVLQDGKVV--GIISERDYARKVILHGLSSVATKAHE 77
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IM I V + + M RHLPVVENGE++ +L I + +AI AE
Sbjct: 78 IMNSPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELLGLLSIGDLVKEAI------AE 131
Query: 182 QGSAI 186
Q I
Sbjct: 132 QADLI 136
>gi|393777870|ref|ZP_10366160.1| cbs domain-containing protein [Ralstonia sp. PBA]
gi|392715169|gb|EIZ02753.1| cbs domain-containing protein [Ralstonia sp. PBA]
Length = 164
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L+GIVTD+DIT R A G P +T V M+ +P++ T D +A +KM + + R +PV
Sbjct: 64 LTGIVTDRDITVRCTAAGHDPAKTRVGDAMSSDPLWCTEDDAIEDACRKMAEHQVRRIPV 123
Query: 154 VE 155
V+
Sbjct: 124 VD 125
>gi|395797325|ref|ZP_10476615.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|421139918|ref|ZP_15599943.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
gi|395338425|gb|EJF70276.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|404508933|gb|EKA22878.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
Length = 146
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 63 TIPEGTIVSDACRRMASRRVDAV-LLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TIP V +A MAS+ V A+ +L D + GI++++D +VI GL T +
Sbjct: 20 TIPHDHTVFEALIVMASKNVGALPVLQDGKVV--GIISERDYARKVILHGLSSVTTKAHE 77
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IM I V + + M RHLPVVENGE++ +L I + +AI AE
Sbjct: 78 IMNSPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELLGLLSIGDLVKEAI------AE 131
Query: 182 QGSAI 186
Q I
Sbjct: 132 QADLI 136
>gi|366164213|ref|ZP_09463968.1| signal-transduction protein [Acetivibrio cellulolyticus CD2]
Length = 139
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
P T+V +A + M V +V + D N ++ G+VTD+DI R +A G P T V +MT
Sbjct: 16 PSNTVV-EAAQLMQKLNVGSVPVFDQNKVV-GVVTDRDIVVRNVAHGKIPQDTKVQDVMT 73
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
VT D E + M Q + R +PV+EN +++ IL
Sbjct: 74 SQVTTVTPDMDVDEVSRIMAQQQIRRVPVIENNQLVGIL 112
>gi|365157699|ref|ZP_09353948.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
gi|363622925|gb|EHL74065.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
Length = 138
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 91 NALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRH 150
N ++G++TD+D+T R +A+ V ++MT N + V+ D+ EA Q M Q + R
Sbjct: 40 NGQVTGMITDRDVTIRAVADDNANKN--VEQVMTHNVVSVSPDASVEEAAQLMAQHQIRR 97
Query: 151 LPVVENGEVIAIL 163
LPVVENG+++ ++
Sbjct: 98 LPVVENGQIVGMV 110
>gi|254512935|ref|ZP_05125001.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
gi|221532934|gb|EEE35929.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
Length = 116
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV---VSKIMTRNPIFVTSD 133
+ +R+ AV++TD N L GI++++DI R +AE P QT+ V+ +MT D
Sbjct: 4 LRDKRIGAVVVTDQNGALQGILSERDIVRR-MAE--TPGQTLPQSVADLMTSEVKTCAPD 60
Query: 134 SLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAA 180
L + L+ M G+FRH+PV+ +G++ ++ I ++ + +E A
Sbjct: 61 DLLNDVLKTMTDGRFRHMPVLSDGKLRGVITIGDVVHFRLKELEYEA 107
>gi|378824078|ref|ZP_09846626.1| CBS domain protein, partial [Sutterella parvirubra YIT 11816]
gi|378597107|gb|EHY30447.1| CBS domain protein, partial [Sutterella parvirubra YIT 11816]
Length = 126
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V + + + TI +++ RM V ++++TDA A G++TD+DI V+A G
Sbjct: 17 VIDMAVHEVATISADCTITECALRMRLDHVGSLVVTDATARPIGMITDRDIAIEVVARGK 76
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN 156
PD++ VS IMT+ + T + + AL +M + R LP+V++
Sbjct: 77 NPDESKVSDIMTKPVVTATPNEGMVTALARMREFGIRRLPIVDD 120
>gi|117927740|ref|YP_872291.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
gi|117648203|gb|ABK52305.1| putative signal-transduction protein with CBS domains [Acidothermus
cellulolyticus 11B]
Length = 126
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDA-NALLSGIVTDKDITTRVIAEGLRPDQTVVS 120
LT+ + + RRMA R+V A ++ D N + GI+T++D+ IA G PD VS
Sbjct: 12 LTVGPNHTLREVARRMAERKVGAAVVIDPENGI--GIITERDLLES-IAAGENPDAEPVS 68
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+TR ++ D +A M++G FRHL V+ EV+ +L
Sbjct: 69 AHLTRELVYAAPDWDLDQAATAMIRGGFRHLVVLSGNEVVGVL 111
>gi|408787107|ref|ZP_11198840.1| hypothetical protein C241_13507 [Rhizobium lupini HPC(L)]
gi|408487060|gb|EKJ95381.1| hypothetical protein C241_13507 [Rhizobium lupini HPC(L)]
Length = 144
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI T++D+ V +G Q VS MT+N I DS E ++ M G+FRH+PV E
Sbjct: 51 GIFTERDLVKAVAGQGAASLQQSVSVAMTKNVIRCHHDSTTDELMEIMTGGRFRHVPVEE 110
Query: 156 NGEVIAILDITKCLYDAISRMEKAAEQ 182
NG + I+ I + I +E AE
Sbjct: 111 NGRLAGIISIGDVVKARIGEIEAEAEH 137
>gi|365901087|ref|ZP_09438943.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. STM 3843]
gi|365418179|emb|CCE11485.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. STM 3843]
Length = 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPD--QTVVSKI 122
P GT++++A M+++ + V++TDA + GI+TD D+ + +RPD ++V I
Sbjct: 229 PLGTVMTEALVEMSAKGLGCVIITDAGDHVVGIITDGDLRRK-----MRPDLMTSLVDDI 283
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
MT +P V SD+LA EAL+ + K L V + + + IL + L
Sbjct: 284 MTASPRTVRSDALASEALEILNSAKITTLIVTDANKPVGILHMHDLL 330
>gi|424910541|ref|ZP_18333918.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392846572|gb|EJA99094.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
GI T++D+ V +G Q VS MT+N I DS E ++ M G+FRH+PV E
Sbjct: 51 GIFTERDLVKAVAGQGAASLQQSVSVAMTKNVIRCHHDSTTDELMEIMTGGRFRHVPVEE 110
Query: 156 NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAA 189
NG + I+ I + I +E AE A A
Sbjct: 111 NGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|384262488|ref|YP_005417675.1| nucleotidyltransferase [Rhodospirillum photometricum DSM 122]
gi|378403589|emb|CCG08705.1| Nucleotidyltransferase [Rhodospirillum photometricum DSM 122]
Length = 475
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P V +A R M RV +L+T A L +GI TD+D+ RV+A L T +++
Sbjct: 19 VTLPPDASVREAARVMRDERVSCILVTAAGTL-TGIFTDRDLRNRVVAADLD-GTTPIAQ 76
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
+M+ P+ + + + A +A+ M + RHLPV +G
Sbjct: 77 VMSPGPVSLEARASAFDAMLLMSRHNIRHLPVTRDG 112
>gi|126462375|ref|YP_001043489.1| signal-transduction protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104039|gb|ABN76717.1| putative signal-transduction protein with CBS domains [Rhodobacter
sphaeroides ATCC 17029]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P G+ ++ A ++SRR+ AV+++ G+++++DI + G V
Sbjct: 16 VTVPPGSSIAAAAEVLSSRRIGAVVVSHDGKRPEGMLSERDIVRELGRRGAGCLSDKVEA 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEK 178
IMT + A +Q M +G+FRHLPV+ GE++ ++ D+ K +S MEK
Sbjct: 76 IMTSKIVTCACTDEADRIMQVMTEGRFRHLPVMAEGEMVGLISIGDVVKARLSELS-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|386401921|ref|ZP_10086699.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385742547|gb|EIG62743.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE-GLRPDQTVVSKIMTRNPIFVT 131
A + + +++ AVL+ + + L GI++++DI RVI E G V+++MTR +
Sbjct: 26 AVKLLGEKKIGAVLVMN-QSRLEGILSERDIV-RVIGERGAGALDEPVAQVMTRKVVTCK 83
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
E ++ M GKFRHLPVV+NG+V+ ++ I
Sbjct: 84 ETDTVAELMEMMTTGKFRHLPVVDNGKVVGLISI 117
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V DA R M+ + + AVL+ + + ++ GIVT++D +++ T V IMTR I+
Sbjct: 25 VFDAIRLMSEKSIGAVLVMEGDEIV-GIVTERDYARKIVLMDRSSKSTPVRDIMTRAVIY 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
V + M + + RHLPV+E+G++I ++ I + D IS
Sbjct: 84 VGPQEDNERCMALMTERRLRHLPVLEHGKLIGLISIGDLVKDIIS 128
>gi|347524337|ref|YP_004781907.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343461219|gb|AEM39655.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 152
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + + +TI V +A R+M + +V++ + GI+T++D+ TRV+AE
Sbjct: 9 VRDVMTREVVTITPDEPVIEAARKMKQYEIGSVVVVSQRGEVIGIITERDLVTRVVAENR 68
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAIL 163
P +T V ++MT NPI V D+ A + M + HLPVV+ G ++ I+
Sbjct: 69 DPLKTTVREVMTPNPITVYDDTPLEIAARLMSERGVGHLPVVDKAGRLVGII 120
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIVTG-SKIQGILTSKDVLMRVVAQNLSP 282
+V ++P +PV AA+KM+++ S ++V+ ++ GI+T +D++ RVVA+N P
Sbjct: 16 EVVTITPDEPVIEAARKMKQYEIGSVVVVSQRGEVIGIITERDLVTRVVAENRDP 70
>gi|187926594|ref|YP_001892939.1| signal-transduction protein with CBS domains [Ralstonia pickettii
12J]
gi|241666105|ref|YP_002984464.1| signal transduction protein with CBS domains [Ralstonia pickettii
12D]
gi|187728348|gb|ACD29512.1| putative signal-transduction protein with CBS domains [Ralstonia
pickettii 12J]
gi|240868132|gb|ACS65792.1| putative signal transduction protein with CBS domains [Ralstonia
pickettii 12D]
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTD---ANALLSGIVTDKDITTRVIA 109
V+ + A+ IP + +A ++M R V A+++T+ + G+VTD+D+ +A
Sbjct: 3 VQDVYSPNAVHIPLSCTLQEAAQQMRQRHVGALVVTENTPSGPRAIGVVTDRDMVLDAVA 62
Query: 110 EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
G+ P QT V+ +M+R + V D+ +ALQ+M+ R + V +G ++ +L + L
Sbjct: 63 VGVSPSQTCVADVMSRGILNVPLDASLSDALQEMLSSGVRRVGVTSDGALVGVLSLDDVL 122
>gi|95930304|ref|ZP_01313041.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
gi|95133556|gb|EAT15218.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
Length = 637
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 55 KLRLSKALTIPEGTIVSDACRR-----MASRRVDAVLLTDANALLSGIVTDKDITTRVIA 109
K RLS+ ++ P ++A R M+ +V +V++TD + G+VT +D+ +V+A
Sbjct: 159 KKRLSEIMSAPVLHCRTEASAREIAELMSQHQVRSVVVTDDGGSMVGMVTCRDVIGKVLA 218
Query: 110 -EGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKC 168
+G + S++M +P+ ++ + EA+ M K +HLP+V+ GE++ ++ ++
Sbjct: 219 IKGADAETITASELMAEDPVSMSPQTYMYEAMAYMSGHKLKHLPIVDGGELVGMVSMSDL 278
Query: 169 L 169
L
Sbjct: 279 L 279
>gi|359786804|ref|ZP_09289892.1| inosine-5-monophpsphate dehydrogenase [Halomonas sp. GFAJ-1]
gi|359295911|gb|EHK60168.1| inosine-5-monophpsphate dehydrogenase [Halomonas sp. GFAJ-1]
Length = 636
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANA---------------LLSGI 97
++KL + +P T V +A +++ + + AVL+ D + + GI
Sbjct: 151 IRKLVSRYPVMVPSTTSVQEAAKQIGAAQASAVLVIDEGSGHPRYSFQDSEGKTWQMCGI 210
Query: 98 VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENG 157
+TD D TRV+AEGL P QT + +++ I + SD+ EA+ M++ HLPV+
Sbjct: 211 LTDSDFRTRVVAEGLSP-QTPIGDVVSERLITIQSDASIYEAMLTMLRSNVHHLPVLYRQ 269
Query: 158 EVIAILDIT 166
+ ++ ++
Sbjct: 270 RPVGVVHLS 278
>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
Length = 205
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 70 VSDACRRMASRRVDAVL-LTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP- 127
V DA + MA + ++L L L+GI+T++D +VIAEG T V++IMT
Sbjct: 81 VYDAVKNMAENNIGSLLVLKPGEKHLAGIITERDYLRKVIAEGRSCHYTRVAEIMTDENR 140
Query: 128 -IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ VTSD+ + A+Q M RH+PV++ G ++ ++
Sbjct: 141 LVTVTSDTTILRAMQLMTDHHIRHVPVID-GRIVGMI 176
>gi|126668780|ref|ZP_01739728.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
gi|126626763|gb|EAZ97412.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
Length = 326
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIM 123
+ EGT +S A ++ + + + D+N L G+ TD D+ R + + + T + ++M
Sbjct: 216 VSEGTTLSGALLEISRKGLGMTTVVDSNGALIGVFTDGDLR-RSLDKNVDVHTTAIEQLM 274
Query: 124 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
TRN + +D LA+EAL M + K LPVV E+GE++ L++ L
Sbjct: 275 TRNGKTIRADQLAVEALNIMEEMKISALPVVGEHGELVGALNMHDLL 321
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 63 TIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKI 122
T+ + +V DA + MA + + A+L+ D + + SGIVT++D +++ + T V +I
Sbjct: 21 TVRKTDLVYDAIKLMAEKGIGALLVMDGDDI-SGIVTERDYARKIVLQDRSSKATRVEEI 79
Query: 123 MTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
MT +V + E + M + + RHLPV+++G++I ++ I
Sbjct: 80 MTSKVRYVEPSQSSDECMALMTEHRMRHLPVLDDGKLIGLISI 122
>gi|339502982|ref|YP_004690402.1| hypothetical protein RLO149_c014420 [Roseobacter litoralis Och 149]
gi|338756975|gb|AEI93439.1| hypothetical protein RLO149_c014420 [Roseobacter litoralis Och 149]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+P +S+A R ++ + + V+++ ++ GI++++DI + A G V+
Sbjct: 16 VTVPPTMNISEAARILSDKGIGTVVVSSNGKVVDGILSERDIVREIGARGAGCLSHTVAS 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYDAISRMEK 178
+MT + D A L++M +G+FRH+PVVE G +I++ D+ K ++ MEK
Sbjct: 76 LMTSKIVTCKKDDEADAILKQMTEGRFRHMPVVEEGALQGLISLGDVVKARLMELA-MEK 134
Query: 179 AAEQG 183
A +G
Sbjct: 135 DALEG 139
>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
12444]
gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
[Novosphingobium aromaticivorans DSM 12444]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+DA +A R+ A+ + D ++GI +++D+ + G V +MT +
Sbjct: 22 VADAVDMLARYRIGALPVEDGTNGVAGIFSERDMIRCLHKHGEAALHMKVRDMMTAPVVT 81
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
+T + +EAL M Q +FRHLPVVE G ++A + I + I ++E A+
Sbjct: 82 ITPQTSVLEALALMTQRRFRHLPVVEGGHMVAFVSIGDLVKHRIDKIEAEAD 133
>gi|407473531|ref|YP_006787931.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
gi|407050039|gb|AFS78084.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 96 GIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
G++TD+DI R I+EG + + V IM+ NPI V+ D+ EA + M Q + R LPVVE
Sbjct: 47 GLLTDRDIIVRAISEG-KSLSSSVKDIMSANPITVSPDTEVSEAAKLMSQNQIRRLPVVE 105
Query: 156 NGEVIAILDI------TKCLYDAISRMEKAAE 181
G+++ I+ + KC + A S + +E
Sbjct: 106 KGKLVGIVSLGDLAVDNKCSHKAGSALSSISE 137
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 69 IVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
+V +A +MA + V A+L+ D + ++ GI++++D +++ G T V IM N I
Sbjct: 26 MVLEALMKMAEKNVGALLVVDNDEVV-GIISERDYARKLVLHGRSSVGTPVRDIMVSNVI 84
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAI 186
V + L M + RHLPVVENG++I +L I + +AI AEQ I
Sbjct: 85 TVDTHQTVDTCLGIMSDKRLRHLPVVENGKLIGLLSIGDLVKEAI------AEQAELI 136
>gi|302037751|ref|YP_003798073.1| hypothetical protein NIDE2438 [Candidatus Nitrospira defluvii]
gi|300605815|emb|CBK42148.1| conserved protein of unknown function, contains CBS domain pair
[Candidatus Nitrospira defluvii]
Length = 127
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV +L K +T+P GT +DA R M R V +V + + N + GIVT+ DI +V+ E
Sbjct: 3 TVSELMTKKLVTVPAGTSAADAARVMNERHVGSVFI-EQNDRVVGIVTESDIVRKVVGEN 61
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAI-EALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
RP V + + +P+ + +I EA M RHL V+++G ++ +L + L
Sbjct: 62 -RPVHFVPVESIMSSPVISLDERRSITEAADLMQHHHTRHLGVLKSGAIVGVLSVRDLL 119
>gi|56708824|ref|YP_164865.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680509|gb|AAV97174.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
Length = 174
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK---IMTRNPIFVTSD 133
+ +R+ AVL+TD N L GI++++DI R+ P QT+ + +MTR D
Sbjct: 62 LKDKRIGAVLVTDQNGALLGILSERDIVRRMADT---PGQTLPQQAEGLMTRAVQTCAPD 118
Query: 134 SLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
L++M +G+FRHLPV+ +G++ ++ I
Sbjct: 119 ETLNVVLKRMTEGRFRHLPVMRDGKLCGMITI 150
>gi|294631308|ref|ZP_06709868.1| signal-transduction protein with CBS domains [Streptomyces sp. e14]
gi|292834641|gb|EFF92990.1| signal-transduction protein with CBS domains [Streptomyces sp. e14]
Length = 131
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
LTI + A M++RRV A ++ D +A GI+T++DI V G PD
Sbjct: 12 LTIGPAHTLRQAAALMSARRVGAAVVHDPDAGGIGILTERDILNSV-GLGQNPDIEHAHA 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCL 169
T + +F EA + M G FRHL V+E+GE V+++ DI +C
Sbjct: 71 HTTTDVVFAAPSWTLEEAARAMAHGGFRHLIVLEDGEPTGVVSVRDIIRCW 121
>gi|312194907|ref|YP_004014968.1| signal transduction protein with CBS domains [Frankia sp. EuI1c]
gi|311226243|gb|ADP79098.1| putative signal transduction protein with CBS domains [Frankia sp.
EuI1c]
Length = 128
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
L I G + A R MA R A ++ D + GI+T++D+ +A G PD + +
Sbjct: 12 LIIGPGHTLRQAARLMAGRGCGAAVVLDTDGAGYGILTERDVLL-ALAAGKDPDVEIAAD 70
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
+TR+ +F + A M++G FRHL V E G V +L D+ +C
Sbjct: 71 HLTRDLVFADPEWSLDTAADAMLRGGFRHLVVTEGGIVAGVLSMRDVVRC 120
>gi|225849609|ref|YP_002729843.1| hypothetical protein PERMA_0044 [Persephonella marina EX-H1]
gi|225646065|gb|ACO04251.1| cbs domain containing protein [Persephonella marina EX-H1]
Length = 139
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
+K + + +T T V D + M + V +V++ + N + GIVTD+DI RV+
Sbjct: 3 IKNVARKEVITASPDTPVKDVAKLMRDKNVGSVVIVENNRPV-GIVTDRDIAIRVLGND- 60
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLY 170
+P + V IMT NP+ + D EAL+++ R PVV+N G + I+ I +Y
Sbjct: 61 QPAEIPVKNIMTENPVTLKEDEGIFEALERVKDVGVRRFPVVDNDGNLTGIVTIDDFVY 119
>gi|154151770|ref|YP_001405388.1| signal-transduction protein [Methanoregula boonei 6A8]
gi|154000322|gb|ABS56745.1| putative signal-transduction protein with CBS domains
[Methanoregula boonei 6A8]
Length = 188
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+ A + M V +V++ + N + GIVT++DI +V+A+ L+P V+ IM+ I
Sbjct: 33 VAKAAKAMCREEVGSVIILERNEPI-GIVTEEDINCKVVAKDLKPSSVQVNTIMSTPLIT 91
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDI 165
V++D ++A Q MV+ + R LPVV+ G+VI I+ +
Sbjct: 92 VSADKTVVDAAQMMVKHRVRRLPVVDKAGKVIGIVTV 128
>gi|87306459|ref|ZP_01088606.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
3645]
gi|87290638|gb|EAQ82525.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
3645]
Length = 363
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAE 110
R + + R+S+ + VS ACR RR A++L D L+GI TD D+ R+
Sbjct: 215 RPLTECRISRYDQLVRDVFVS-ACR--PGRRTGAIMLVDEQGKLAGIFTDSDLA-RIFET 270
Query: 111 GLRP--DQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDIT 166
G DQ + S +MT++P VTS +EAL + + K LPV+ + GE I +LDIT
Sbjct: 271 GRTELLDQPI-SIVMTQSPKTVTSGVRVLEALSAIAKSKISELPVINDTGEPIGMLDIT 328
>gi|381393725|ref|ZP_09919444.1| CBS domain-containing protein [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379330619|dbj|GAB54577.1| CBS domain-containing protein [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 625
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANA----LLSGIVTDKDITTRVIAEGLRPDQTVV 119
+P T V A +M RRV +VL+ +L GI+TD+D+ +RV+A G+ T V
Sbjct: 171 LPTDT-VKHAAVQMNERRVSSVLVMSNEVHREKVLVGILTDRDLRSRVVASGISL-STPV 228
Query: 120 SKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
S++MT+ P+F+T + +A+ M + HLPV++
Sbjct: 229 SEVMTKQPVFLTRNETIFDAICIMNEQSIHHLPVLD 264
>gi|188997444|ref|YP_001931695.1| signal-transduction protein with CBS domains [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188932511|gb|ACD67141.1| putative signal-transduction protein with CBS domains
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 600
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
VK++ L + + + + T + DA + M + +V++ N GI+TD DI ++I + +
Sbjct: 141 VKEIELQQPVIVSKDTTIYDAVKEMTEKGAYSVIVDFGNGEY-GIITDSDIRKKIILQNI 199
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
+ V KI T+ I + +DS +A+ M++ + + V ENG++I IL+
Sbjct: 200 STSENV-EKIATKGLITINADSFLFDAIFLMIKHNIKRVVVEENGKIIGILN 250
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V+DA + ++ R+ V+++ L GI++++DI + G+ V +MT
Sbjct: 24 VTDAAKLLSKHRIGTVVVSADGETLDGILSERDIVRELGKRGMGCLNDPVRDLMTAKLTT 83
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISR--MEKAAEQG 183
+ A+E L+ M G+FRHLPV++NG+++ ++ I + +++ MEK + +G
Sbjct: 84 CGPSNNALEVLEIMTAGRFRHLPVMDNGKMVGLISIGDAVKGRLAQLAMEKESLEG 139
>gi|408826341|ref|ZP_11211231.1| hypothetical protein SsomD4_04078 [Streptomyces somaliensis DSM
40738]
Length = 139
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + + A IP + A R M V A+ + D + L GIVTD+DI + +A G
Sbjct: 3 TARDIMHTGAHWIPAHETLDAAARLMREHNVGALPIADGDERLCGIVTDRDIVVKCVAAG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
P + + P ++ + + E L++M + + LPV++N ++ I+ D+ +
Sbjct: 63 QDPSRVTCGDVAEGTPRWIDAGADVSEVLREMRSHRIKRLPVIDNKRLVGIISEADLARH 122
Query: 169 LYD 171
L D
Sbjct: 123 LPD 125
>gi|56697064|ref|YP_167427.1| hypothetical protein SPO2201 [Ruegeria pomeroyi DSS-3]
gi|56678801|gb|AAV95467.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
+A +R+ V+++D GI++++DI + A G VS MT++ I D+
Sbjct: 31 LAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVSTYMTKDLITCGRDAKV 90
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAIL---DITKCLYDAISRMEKAAEQG 183
+ L +M +G+FRH+PV+E G+++ ++ D+ K ++ MEK A +G
Sbjct: 91 QDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELA-MEKDALEG 139
>gi|356509678|ref|XP_003523573.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 70 VSDACRRMASRRVDA-VLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT--RN 126
V +A + MA + + V+L ++GI+T++D +++A+G P T V +IMT N
Sbjct: 81 VINAMKNMADNNIGSLVVLKPEGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDENN 140
Query: 127 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I VTS++ ++A++ M + RH+PV++ G+++ ++ I
Sbjct: 141 LITVTSNTNILQAMKIMTENHIRHVPVID-GKIVGMISI 178
>gi|254380668|ref|ZP_04996034.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339579|gb|EDX20545.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 59 SKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTV 118
+ A+TIP T V + R+M + +V++T+ AL GIVTD+D+ R +A GL + V
Sbjct: 9 APAVTIPPRTPVGEVARQMGEYGIGSVVVTEGGAL-RGIVTDRDLALRALAGGLDMGEAV 67
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
+MT + V + EA + + R LPV++ +V+ +L + L D R+
Sbjct: 68 -DAVMTSPVVTVNATDDIHEAYRTFRRTGVRRLPVLDGSQVVGMLTVDDLLMDVFQRV 124
>gi|418468490|ref|ZP_13039285.1| oxidoreductase [Streptomyces coelicoflavus ZG0656]
gi|371550901|gb|EHN78254.1| oxidoreductase [Streptomyces coelicoflavus ZG0656]
Length = 139
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V+ + +T+ T V++ R M R + AVL+T+ + L G+VTD+D+ R +AEG
Sbjct: 5 VRDIMTGDPVTVEPLTSVTEVARIMRDRDLGAVLVTEGDRL-RGLVTDRDLVVRSLAEGG 63
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
P+QT V+ + + + V SD ++ M + R +PVV++G + I+
Sbjct: 64 DPEQTTVAGACSDDMVTVRSDEELGHVVELMREHTVRRVPVVDDGHPVGIV 114
>gi|119387182|ref|YP_918237.1| signal-transduction protein [Paracoccus denitrificans PD1222]
gi|119377777|gb|ABL72541.1| putative signal-transduction protein with CBS domains [Paracoccus
denitrificans PD1222]
Length = 145
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
T+ G V+DA + ++ +R+ A+++++ + GI++++DI + G +++
Sbjct: 16 FTVAPGASVADAAKLLSEKRIGAIVVSEDGKVPLGILSERDIVRELGRRGADVLGLPITE 75
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDAIS-RMEKA 179
+MT T+ A+ L +M QG+FRHLPVV E G ++ ++ I DA+S R+++
Sbjct: 76 LMTHKLATCTTGEDALVILDRMTQGRFRHLPVVDEAGAMVGLISIG----DAVSARLKEL 131
Query: 180 AEQGSAIAAAVEG 192
A + A+ + G
Sbjct: 132 AAEKEALTGMIMG 144
>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 182
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
TIPE T V DA ++ A+ + ++ TD ++G+V+++D ++ G +T V +
Sbjct: 44 FTIPEDTPVYDAVQKFAAFNIGCLVTTDKAGNMTGVVSERDYICKIALLGRTSKETPVKE 103
Query: 122 IMTRNPIFVTSDS-LAIE-ALQKMVQGKFRHLPVVENGE-VIAILDITKCLYDAISRMEK 178
I TR +T+ + ++E ++KM+ RHLP+V++ E VI ++ I + I+ E+
Sbjct: 104 IATRGANIITAKAGESVESCMEKMMSKGIRHLPIVDDAEKVIGMVSIKDLVKTVITEKEQ 163
>gi|372271462|ref|ZP_09507510.1| hypothetical protein MstaS_10322 [Marinobacterium stanieri S30]
Length = 623
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 61 ALTIPEGTIVSDACRRMASRRVDAVLLTDANAL---LSGIVTDKDITTRVIAEGLRPDQT 117
A+T+P V +A RM+ V +VL+ D + GI+TD+D+ R+I GL D T
Sbjct: 161 AVTLPPTASVREAAIRMSEEGVSSVLVLDEQMEEEPVVGIITDRDLRNRLITPGLSFD-T 219
Query: 118 VVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITK 167
VS+IMT I V EA+ M++ HLPV++ VIAI DI +
Sbjct: 220 PVSEIMTSELISVEYGQFVFEAMLLMLRHNVHHLPVLKKQRPLGVIAISDIIR 272
>gi|338989098|ref|ZP_08633977.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|338205963|gb|EGO94220.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+++P + + +A +R+ AV++ N+ L GI++++D+ + A G + S+
Sbjct: 13 ISVPPEARIREVVVVLAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAATLEMEASQ 72
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE---VIAILDITKCLYD 171
+MTR P T + EA M G+FRHLP+V+ G+ V++I D+ K L +
Sbjct: 73 LMTRAPTTATPSTTVFEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSLIE 125
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T+ + V DA + MA RR+ AV++ +L G+++++D +V+ + T V
Sbjct: 25 VTVSPDSSVFDAIKTMAERRIGAVVVVQGETVL-GMLSERDYARKVVLQDRSSRTTKVRD 83
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAIS 174
IMT + +V + M + FRHLPV+EN ++I +L I + D +S
Sbjct: 84 IMTDSVYYVGPGDTREHCMAMMTERHFRHLPVIENEKLIGLLSIGDLVKDIMS 136
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 211 LRERMFKPSLSTIITE--NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
+RE + K +++ I+ E N V VSP V A K M E R + ++V G + G+L+
Sbjct: 4 IREHIVK-TVAEILREKSNNAVVTVSPDSSVFDAIKTMAERRIGAVVVVQGETVLGMLSE 62
Query: 269 KDVLMRVVAQNLSPELTLV 287
+D +VV Q+ S T V
Sbjct: 63 RDYARKVVLQDRSSRTTKV 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.128 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,951,040,068
Number of Sequences: 23463169
Number of extensions: 149897106
Number of successful extensions: 807668
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2256
Number of HSP's successfully gapped in prelim test: 4360
Number of HSP's that attempted gapping in prelim test: 796979
Number of HSP's gapped (non-prelim): 12254
length of query: 294
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 153
effective length of database: 9,050,888,538
effective search space: 1384785946314
effective search space used: 1384785946314
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 76 (33.9 bits)