BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041090
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/295 (76%), Positives = 255/295 (86%), Gaps = 6/295 (2%)
Query: 2 SSQGGSRRSQ--KRAPSTSKRTSSSENG---GNLSKPPSPQGESSSSVGGAGGERTVKKL 56
SS G R + +R P SK+ SENG GN SKP S S + GERTVKKL
Sbjct: 9 SSTSGRRSNSTVRRGPPPSKKPVQSENGSVNGNTSKPNS-PPPQPQSQAPSNGERTVKKL 67
Query: 57 RLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
RLSKALTIPEGT V DACRRMA+RRVDA LLTD++ALLSGIVTDKD+ TRVIAEGLRPDQ
Sbjct: 68 RLSKALTIPEGTTVFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQ 127
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRM 176
T+VSK+MTRNPIFVTSDSLA+EALQKMVQGKFRHLPVVENGEVIA+LDITKCLYDAISRM
Sbjct: 128 TLVSKVMTRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRM 187
Query: 177 EKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPS 236
EKAAEQGSA+AAAVEGVE+QWGS +SAPYAFIETLRERMFKP+LSTIIT+N+KVA+V+PS
Sbjct: 188 EKAAEQGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPS 247
Query: 237 DPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
DPV+VAAK+MR+ R NS +I TG+KI GILTSKD+LMRVVAQNLSPELTLVE+ +
Sbjct: 248 DPVSVAAKRMRDLRVNSVIISTGNKISGILTSKDILMRVVAQNLSPELTLVEKVM 302
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
VS A +RM RV++V+++ N + SGI+T KDI RV+A+ L P+ T+V K+MT NP
Sbjct: 250 VSVAAKRMRDLRVNSVIISTGNKI-SGILTSKDILMRVVAQNLSPELTLVEKVMTPNPEC 308
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAA 188
+ ++ ++AL M GKF HLP+++ +G A +D+ + + AIS +E ++ G+
Sbjct: 309 ASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSS--GAVNDM 366
Query: 189 AVEGVERQWGS 199
A +++ W S
Sbjct: 367 ANTMMQKFWDS 377
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KDV RV+A+ L P+ TLV + + R
Sbjct: 84 ACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTR 136
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 227/263 (86%), Gaps = 10/263 (3%)
Query: 29 NLSKPPSPQGESSSSVGGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLT 88
N SKP SP + S GERTVKKLRLSKALTI EGT V DACRRMA+RRVDAVLLT
Sbjct: 43 NTSKPDSPLAQPVSD-----GERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLT 97
Query: 89 DANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKF 148
D++ALLSGIVTDKDI TRVIAEGLRP+ T+VSK+MTRNPIFVTSDSLAIEALQKMVQGKF
Sbjct: 98 DSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLAIEALQKMVQGKF 157
Query: 149 RHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFI 208
RHLPVVENGEVIA+LDITKCLYDAISRMEKAAEQGSA+A AVE ER WG S +AFI
Sbjct: 158 RHLPVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERHWG---SGNFAFI 212
Query: 209 ETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTS 268
+TLRERMFKP+LSTI+TEN KVA+VS SDPV VA+KKMR+ R NS +I G+KI GILTS
Sbjct: 213 DTLRERMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTS 272
Query: 269 KDVLMRVVAQNLSPELTLVERFI 291
KD+LMRVVAQNLSPELTLVE+ +
Sbjct: 273 KDILMRVVAQNLSPELTLVEKVM 295
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++M RV++V++ N + GI+T KDI RV+A+ L P+ T+V K+MT NP +
Sbjct: 246 ASKKMRDLRVNSVIIAVGNKI-HGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASI 304
Query: 133 DSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVE 191
++ ++AL M GKF HLPV + +G +A LD+ + + AIS +E + G+ A
Sbjct: 305 ETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAISTVENNS-SGAVNDMANT 363
Query: 192 GVERQWGS 199
+++ W S
Sbjct: 364 MMQKFWDS 371
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 242 AAKKMREFRSNSALIVTGSKI-QGILTSKDVLMRVVAQNLSPELTLVERFIMR 293
A ++M R ++ L+ S + GI+T KD+ RV+A+ L PE TLV + + R
Sbjct: 82 ACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTR 134
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 357 bits (917), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/297 (61%), Positives = 228/297 (76%), Gaps = 16/297 (5%)
Query: 1 MSSQGGSRRSQKRAPSTSKRTSSSENGGNLSKPPSPQG---------ESSSSVGGAGGER 51
M+SQGG RRS T++S +G S + +G S S +G GGER
Sbjct: 1 MASQGGPRRSLSV-------TTASLHGKKKSMDMAERGLDTGRRSLTVSRSPLGLTGGER 53
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TVK+LRLSKALT+P T + +AC+RMASRRVDA+LLTD+N +L GI+TDKDI TRVI++
Sbjct: 54 TVKRLRLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQE 113
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
L ++T VSK+MT+NP+FV S++LA+EALQKMVQGKFRHLPVVENGEVIA+LDI KCLYD
Sbjct: 114 LNVEETPVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 173
Query: 172 AISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVA 231
AI+RME+AAE+G AIAAAVEGVE+ WG+N S P FIETLR+RMF+PSLSTII ++ KV
Sbjct: 174 AIARMERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVL 233
Query: 232 IVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVE 288
VSP+D V AKKM EF+S+ A+++ K++GI TSKD+LMRVVA+NL P TLVE
Sbjct: 234 KVSPTDTVLTVAKKMVEFQSSCAVVIIEDKLRGIFTSKDILMRVVAENLPPSETLVE 290
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI T KDI RV+AE L P +T+V +MT+NP D+ +EAL M +GKF HLPV
Sbjct: 264 LRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 323
Query: 154 VE 155
+
Sbjct: 324 TD 325
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 228 AKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSK--IQGILTSKDVLMRVVAQNLSPELT 285
+K V + + A K+M R + AL++T S + GILT KD+ RV++Q L+ E T
Sbjct: 61 SKALTVPATTTIYEACKRMASRRVD-ALLLTDSNEMLCGILTDKDIATRVISQELNVEET 119
Query: 286 LVERFIMR 293
V + + +
Sbjct: 120 PVSKVMTK 127
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 332 bits (850), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/247 (63%), Positives = 203/247 (82%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G GERTVK+LRL KALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TD+DI
Sbjct: 55 GERSGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIA 114
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
T+VIA+ L ++T VSK+MT+NP+FV SD++A+EALQKMVQGKFRHLPVVENGEVIA+LD
Sbjct: 115 TKVIAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLD 174
Query: 165 ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
I KCLYDAI+RME++ E+G AIAAAVEGVE+ WG++ + P F+ETLRER+FKPSLSTII
Sbjct: 175 IAKCLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTII 234
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN KV V + V KM E++S++A+++ +K+ GILTSKD+LMRV++QNL E
Sbjct: 235 PENTKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQET 294
Query: 285 TLVERFI 291
T VE+ +
Sbjct: 295 TTVEKVM 301
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT NP T D +EAL M GKF HLPV
Sbjct: 272 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 331
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 332 LDKDGDVVAVIDVIHITHAAVT 353
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 332 bits (850), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/247 (63%), Positives = 203/247 (82%)
Query: 45 GGAGGERTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDIT 104
G GERTVK+LRL KALT+P+ T + +ACRRMA+RRVDA+LLTD+NALL GI+TD+DI
Sbjct: 55 GERSGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIA 114
Query: 105 TRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILD 164
T+VIA+ L ++T VSK+MT+NP+FV SD++A+EALQKMVQGKFRHLPVVENGEVIA+LD
Sbjct: 115 TKVIAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLD 174
Query: 165 ITKCLYDAISRMEKAAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTII 224
I KCLYDAI+RME++ E+G AIAAAVEGVE+ WG++ + P F+ETLRER+FKPSLSTII
Sbjct: 175 IAKCLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTII 234
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
EN KV V + V KM E++S++A+++ +K+ GILTSKD+LMRV++QNL E
Sbjct: 235 PENTKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQET 294
Query: 285 TLVERFI 291
T VE+ +
Sbjct: 295 TTVEKVM 301
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GI+T KDI RVI++ L + T V K+MT NP T D +EAL M GKF HLPV
Sbjct: 272 LVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPV 331
Query: 154 VE-NGEVIAILDITKCLYDAIS 174
++ +G+V+A++D+ + A++
Sbjct: 332 LDKDGDVVAVIDVIHITHAAVT 353
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 137/256 (53%), Gaps = 25/256 (9%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
TV L ALT+ ++V++ + MA++R + VL+ D + L+GIVT DI TR + G
Sbjct: 64 TVDSAALDPALTVHMQSLVTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAG 123
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV----------ENGEVIA 161
L QT+++ IM+ +P+ +TSD+ +AL M++ KFRHLPVV + G+VI
Sbjct: 124 LNARQTLIADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVVSDGGPDGSAGDEGDVIG 183
Query: 162 ILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW--------------GSNFSAPY-A 206
I+++ CL + ++R+ + E + A+EG + + N +A +
Sbjct: 184 IINMRACLREPLNRIARQQEAAQKLVEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLE 243
Query: 207 FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGIL 266
++E+L+++ + ++I + + +V VA A + M ++ L++ + G+
Sbjct: 244 YVESLKKKASGLEIMSLIDSSEEPFLVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVF 303
Query: 267 TSKDVLMRVVAQNLSP 282
T+ DV++RV+A L P
Sbjct: 304 TAHDVVLRVLAAGLDP 319
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T V++A MA V AVL+ D N +SG+ T D+ RV+A GL P ++ V ++MT +P
Sbjct: 274 TTVAEATESMARSGVSAVLVMD-NGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPHP 332
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVI 160
+ AL++M++GKF +LPVV+ + I
Sbjct: 333 DCALASLRVSTALERMIEGKFSNLPVVDESDAI 365
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGL 112
V ++ +K + +++A + M + ++++ D+ + GI+T++DI V A
Sbjct: 5 VSQIATTKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDI---VKAASN 61
Query: 113 RPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGE---VIAILDITKC 168
R + V K MT++ VT D+ +AL M+ FRHLP+++ NG+ +++I D+ +
Sbjct: 62 RDIDSPVEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARA 121
Query: 169 LYDAIS-RMEKAAEQ--GSAIAAAVEGVE-RQWG 198
L D + + K AE+ G+ + V G+E ++G
Sbjct: 122 LLDVHTMQFGKPAEEVKGTGVICPVCGMEIDEYG 155
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 229 KVAIVSPSDPVAVAAKKMREFRSNSALIV-TGSKIQGILTSKDVL 272
KV +V P+ +A AAK+M+E S +++ + +++ GI+T +D++
Sbjct: 12 KVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIV 56
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ D M + AV++ + N + GIVT++DI RV+++ L+P + ++M++ I
Sbjct: 26 IYDIANIMTENNIGAVVIVENNKPI-GIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIIT 84
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
+ ++ EA + M + LPVV++GE++ I+
Sbjct: 85 IPQNASITEAAKIMATHGIKRLPVVKDGELVGIV 118
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 243 AKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVERFI 291
A M E + +IV +K GI+T +D++ RVV++NL P+ L E +
Sbjct: 30 ANIMTENNIGAVVIVENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVM 78
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 70 VSDACRRMASRRVDAVLLTD--ANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
V DA + M V A+++ L+GI+T++D ++I +G T V IMT
Sbjct: 81 VYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 140
Query: 128 --IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDI 165
I VT ++ + A+Q M + RH+PV+++ +I ++ I
Sbjct: 141 KLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 76 RMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSL 135
+M + +V++ + GI+T++D+ +V+++G PD+ + IM++ I V D
Sbjct: 29 KMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQPVITVEEDME 88
Query: 136 AIEALQKMVQGKFRHLPVV-ENGEVIAIL 163
EA++ MV R LP+V +NG++I I+
Sbjct: 89 VNEAVKLMVDKGIRRLPIVDDNGKLIGIV 117
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 70 VSDACRRMASRRVDAVLLTDANA-LLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPI 128
V +A +M V A+ + D + L GIVTD+D+ R IA +P+ ++ MT P+
Sbjct: 21 VYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIK-KPNSQKITDAMTEKPV 79
Query: 129 FVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQ-GSAIA 187
V D+ E L M + R +PV +N ++ I+ + +S E+ E+ GSA++
Sbjct: 80 SVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGD-----LSLSEQTNERAGSALS 134
Query: 188 AAVEGVERQWG 198
EG R+ G
Sbjct: 135 DISEGDNREEG 145
>sp|Q5NGP7|KDSD_FRATT Arabinose 5-phosphate isomerase KdsD OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=kdsD PE=1
SV=1
Length = 327
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 73 ACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
A ++ + V L+ + N LL GI TD D+ AE Q +S++MT+NP ++
Sbjct: 227 AILEISDKGVGNTLVAENNTLL-GIFTDGDLRRMFEAESFN-SQRAISEVMTKNPKSISK 284
Query: 133 DSLAIEALQKMVQGKFRHLPVVENGEVI 160
+ +AI AL+KM + + L VV+NG I
Sbjct: 285 EEMAITALEKMEKYEITSLAVVDNGHNI 312
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 54 KKLRLSKALT--------IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITT 105
+KLRL K L + E T + +A M ++ A + + L GI+TD D+
Sbjct: 194 RKLRLVKDLYHTGEEVPIVKEDTSMKEAIIEMTAKGFGATAVVNEEGKLVGIITDGDLR- 252
Query: 106 RVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILD 164
R + G + T +MT+NP + D LA++AL+KM L VV E E I IL
Sbjct: 253 RFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKMEDHNITVLIVVNEENEPIGILH 312
Query: 165 ITKCL 169
+ L
Sbjct: 313 MHDIL 317
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
+VK ++ T+ + +A M V A+ + + +L G++TD+DI R A+G
Sbjct: 3 SVKDTMTTQVATVSPNQTIQEAASLMKQHNVGAIPVVE-QGVLKGMLTDRDIALRTTAQG 61
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYD 171
R QT VS++M+ + + +A Q M Q + R LP+V+ ++ I+ + +
Sbjct: 62 -RDGQTPVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDLAVN 120
Query: 172 AISR 175
+S
Sbjct: 121 QMSN 124
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 225 TENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQ 278
T +VA VSP+ + AA M++ + +V ++G+LT +D+ +R AQ
Sbjct: 7 TMTTQVATVSPNQTIQEAASLMKQHNVGAIPVVEQGVLKGMLTDRDIALRTTAQ 60
>sp|Q9ZD42|Y505_RICPR Uncharacterized protein RP505 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP505 PE=3 SV=1
Length = 319
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 64 IPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT---VVS 120
+ E T ++ M +R+ L+TD L GI+TD D+ + DQ S
Sbjct: 212 VYEDTSFTETIIIMNKKRLGCTLVTDKEQNLIGIITDGDLRRNI------HDQIHLKTAS 265
Query: 121 KIMTRNPIFVTSDSLAIEALQKMVQGKFRHLP 152
IMT+NP +++S+ A EAL M ++P
Sbjct: 266 SIMTKNPHYISSEIFAQEALNLMKAKNITNIP 297
>sp|Q9KHT9|OPUCA_LISMN Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes GN=opuCA PE=1 SV=1
Length = 397
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M +RVD +L+ D +L G + + I R T V I+ +N +V D+L
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQIDLN------RRTATSVMDIIEKNVFYVYEDTLL 328
Query: 137 IEALQKMVQGKFRHLPVVENGE----VIAILDITKCLYDAI-SRMEKAAE 181
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 329 RDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 83 DAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQK 142
D +L AN+ + + KD R+I +PD T V++IM NP+ +T+D A+
Sbjct: 221 DEILRNPANSFVEDFIG-KD---RLIEA--KPDVTQVAQIMNTNPVSITADKSLQAAITV 274
Query: 143 MVQGKFRHLPVVENGEVI 160
M + + L VV+ G V+
Sbjct: 275 MKEKRVDTLLVVDEGNVL 292
>sp|G2JZ44|OPUCA_LISM4 Carnitine transport ATP-binding protein OpuCA OS=Listeria
monocytogenes serotype 1/2a (strain 10403S) GN=opuCA
PE=1 SV=1
Length = 397
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M +RVD +L+ D +L G + + I R T V I+ +N +V D+L
Sbjct: 275 MKEKRVDTLLVVDEGNVLKGFIDVEQIDLN------RRTATSVMDIIEKNVFYVYEDTLL 328
Query: 137 IEALQKMVQGKFRHLPVVENGE----VIAILDITKCLYDAI-SRMEKAAE 181
+ +Q++++ ++++PVV+ + ++ + +YD+I +E A E
Sbjct: 329 RDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATE 378
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 83 DAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQK 142
D +L AN+ + + KD R+I +PD T V++IM NP+ +T+D A+
Sbjct: 221 DEILRNPANSFVEDFIG-KD---RLIEA--KPDVTQVAQIMNTNPVSITADKSLQAAITV 274
Query: 143 MVQGKFRHLPVVENGEVI 160
M + + L VV+ G V+
Sbjct: 275 MKEKRVDTLLVVDEGNVL 292
>sp|Q9C5D0|CBSX2_ARATH CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis
thaliana GN=CBSX2 PE=1 SV=1
Length = 238
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG-------LRPD----- 115
T V DA + ++V + + D N L G+V+D D+ G L PD
Sbjct: 96 TSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 155
Query: 116 ------QTVVSK--------IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVI 160
Q ++SK +MT +P+ V + +A + +++ KFR LPVV+ +G++I
Sbjct: 156 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLI 215
Query: 161 AIL 163
IL
Sbjct: 216 GIL 218
>sp|Q9M1T1|SETH3_ARATH Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana
GN=SETH3 PE=2 SV=1
Length = 350
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 66 EGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTR 125
EG ++ D + S+ +L+ D ++ L G TD D+ + A G + V ++ R
Sbjct: 240 EGDLIMDQLVELTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNR 299
Query: 126 NPIFVTSDSLAIEALQKMVQ--GKFRHLPVV-ENGEVIAILDI 165
P + +++A+EA++KM + LPVV E+ +I I+ +
Sbjct: 300 KPRTIGPETMAVEAMKKMESPPSPVQFLPVVNEDNTLIGIVTL 342
>sp|Q57837|Y392_METJA Zinc metalloprotease MJ0392 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0392 PE=1 SV=1
Length = 339
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 50/163 (30%)
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAE 181
IMT NP++VT D E L M++ K+ PVVENG+++ C+ I + K
Sbjct: 225 IMTPNPVYVTPDMSIEEFLDFMLKHKYFGYPVVENGKLVG------CI--GIGNIHKK-- 274
Query: 182 QGSAIAAAVEGVERQWGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAV 241
EG T+R+ M KP +VS +
Sbjct: 275 ---------EG-----------------TVRDYMEKP------------VVVSEDTDIKE 296
Query: 242 AAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPEL 284
+KM ++ +V G K++GI++ D+L + L EL
Sbjct: 297 ILRKMA--NTDRVFVVEGGKLKGIISKTDILRAMSILELKEEL 337
>sp|Q9HVW0|KDSD_PSEAE Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=kdsD PE=1 SV=1
Length = 326
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 42 SSVGGAGGERTVKKLR--LSKALTIPE---GTIVSDACRRMASRRVDAVLLTDANALLSG 96
S GGA G R + K+ + +P+ GT ++ A M + + ++ D + L+G
Sbjct: 189 SHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGKLAG 248
Query: 97 IVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE 155
I TD D+ R + G+ Q + ++MT + V ++ LA EAL+ M K L VV+
Sbjct: 249 IFTDGDLR-RALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVVD 306
>sp|Q58622|Y1225_METJA Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1225 PE=1 SV=1
Length = 280
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 53 VKKLRLSKALTIPEGTIVSDACRRMASRRVD-AVLLTDANALLSGIVTDKDITTRVIAEG 111
V+++ +T+ E + +A ++ V A ++ D N L+S ++T++D+ R + +
Sbjct: 86 VREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLIS-LITERDVI-RALLDK 143
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
+ ++ V+ +TR+ I T + + MV+ FR LPVV G ++ I+ D K
Sbjct: 144 IDENE-VIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKL 202
Query: 169 L 169
L
Sbjct: 203 L 203
>sp|Q8FDQ2|KPSF_ECOL6 Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=kpsF PE=1 SV=2
Length = 327
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
++ C+ M V++ DA L+GI+TD D+ + EG T +++MTR P+
Sbjct: 237 ITSGCQGM-------VMVEDAEGGLAGIITDGDLRRFMEKEGSLTSATA-AQMMTREPLT 288
Query: 130 VTSDSLAIEALQKM 143
+ D++ IEA +KM
Sbjct: 289 LPEDTMIIEAEEKM 302
>sp|Q57976|M556_METJA Methylated protein MJ0556 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0556 PE=1 SV=3
Length = 174
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 62 LTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSK 121
+T PE TI + M + + + D ++ G +T ++I + + V +
Sbjct: 35 ITTPEKTI-KEIFDEMIKHNISGMPVVDDRGVMIGFITLREIRKYMTSHPYLN----VGE 89
Query: 122 IMTRNPIFVTSDSLAIEALQKMVQG--KFRHLPVVENGE----------VIAILDITKCL 169
+M +NP + T+D I A +KM++ K LPV+ +I + DI K L
Sbjct: 90 VMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKLL 149
Query: 170 YDAISR 175
Y+ I +
Sbjct: 150 YENIIK 155
>sp|O06186|HRP1_MYCTU Hypoxic response protein 1 OS=Mycobacterium tuberculosis GN=hrp1
PE=1 SV=1
Length = 143
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 52 TVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEG 111
T + + + + E ++ A + M + A+ + + L G++TD+DI + +A G
Sbjct: 3 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG 62
Query: 112 LRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL---DITKC 168
L P+ ++ + +V +++ E L M + + R +PV+ ++ I+ DI +
Sbjct: 63 LDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARH 122
Query: 169 L 169
L
Sbjct: 123 L 123
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 227 NAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGS--KIQGILTSKDVLMRVVAQNLSP 282
NA V V + + AA+ MRE AL + G ++ G+LT +D++++ +A L P
Sbjct: 9 NAGVTCVGEHETLTAAAQYMRE-HDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDP 65
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 38.1 bits (87), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
RTVK+L + +T+PE V +A + M R+D + + + + L G++T D+ R
Sbjct: 150 RTVKELMTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLVAR 205
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
++ + +TI + A M +D + + + + ++ GI+T KDI R EG
Sbjct: 96 ERFIVEDVITIAPDETIDYALFLMEKHGIDGLPVVEEDRVV-GIITKKDIAAR---EG-- 149
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCLYDA 172
V ++MTR I V EAL+ M++ + LPVV E+G+++ ++ ++ +
Sbjct: 150 ---RTVKELMTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLVARK 206
Query: 173 ISRMEKAAEQGSAIAAA 189
+ E+G + AA
Sbjct: 207 KYKNAVRNEKGELLVAA 223
>sp|P42502|KPSF1_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 317
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 75 RRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDS 134
+R+ S V++ DA L+GI+TD D+ R + + +++MTR P+ + D+
Sbjct: 235 QRITSGCQGMVMVEDAEGGLAGIITDGDLR-RFMEKEDSLTSATAAQMMTREPLTLPEDT 293
Query: 135 LAIEALQKMVQGK 147
+ IEA +KM + K
Sbjct: 294 MIIEAEEKMQKDK 306
>sp|Q8X9J0|KDSD_ECO57 Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O157:H7
GN=kdsD PE=3 SV=1
Length = 328
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA + + + ++ D N ++ GI TD D+ RV G+ Q ++ +MT I V
Sbjct: 227 DALLEVTRKNLGMTVICDDNMMIEGIFTDGDLR-RVFDMGVDVRQLSIADVMTPGGIRVR 285
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
LA+EAL M + V + ++ +L + L
Sbjct: 286 PGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLL 323
>sp|P21620|IMDH_LEIDO Inosine-5'-monophosphate dehydrogenase OS=Leishmania donovani PE=1
SV=1
Length = 514
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 51 RTVKKLR---LSKALTIPEGTIVSDACRRMASRRVDAVLLT---DANALLSGIVTDKDIT 104
++VK R +SK ++P T +S+ R + + +L+T D + L GIV KDI
Sbjct: 103 KSVKAYRNGFISKPKSVPPNTPISNIIRIKEEKGISGILVTENGDPHGKLLGIVCTKDI- 161
Query: 105 TRVIAEGLRPDQTVVSKIMT-RNPIFVTSDSLAI-EALQKMVQGKFRHLPVV-ENGEVIA 161
+ ++ T VS +MT R + V + + EA+ + + ++ +LP+V EN EV+
Sbjct: 162 -----DYVKNKDTPVSAVMTRREKMTVERAPIQLEEAMDVLNRSRYGYLPIVNENDEVVN 216
Query: 162 IL 163
+
Sbjct: 217 LC 218
>sp|P45395|KDSD_ECOLI Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli (strain
K12) GN=kdsD PE=1 SV=1
Length = 328
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA + + + ++ D N ++ GI TD D+ RV G+ Q ++ +MT I V
Sbjct: 227 DALLEVTRKNLGMTVICDDNMMIEGIFTDGDLR-RVFDMGVDVRQLSIADVMTPGGIRVR 285
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
LA+EAL M + V + ++ +L + L
Sbjct: 286 PGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLL 323
>sp|Q83JF4|KDSD_SHIFL Arabinose 5-phosphate isomerase KdsD OS=Shigella flexneri GN=kdsD
PE=3 SV=2
Length = 328
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA + + + ++ D N ++ GI TD D+ RV G+ Q ++ +MT I V
Sbjct: 227 DALLEVTRKNLGMTVICDDNMMIEGIFTDGDLR-RVFDMGVDVRQLSIADVMTPGGIRVR 285
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
LA+EAL M + V + ++ +L + L
Sbjct: 286 PGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLL 323
>sp|B1L5U5|IMDH_KORCO Inosine-5'-monophosphate dehydrogenase OS=Korarchaeum cryptofilum
(strain OPF8) GN=guaB PE=3 SV=1
Length = 476
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 94 LSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 153
L GIVT +D+ AE +V IMT++PI V + EA + M + K LPV
Sbjct: 129 LVGIVTRRDV---YFAEN---GSLLVKDIMTKDPITVGPEITPQEARKIMARYKIEKLPV 182
Query: 154 V-ENGEVIAILDITKCLY 170
V E+GE+I ++ Y
Sbjct: 183 VSESGELIGLVTAKDVFY 200
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 230 VAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLM 273
V VSP D V A + MRE + ++ G K+ GI+T +DV
Sbjct: 97 VITVSPEDSVEEARRLMREHGISGLPVIVGRKLVGIVTRRDVYF 140
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0922 PE=1 SV=1
Length = 138
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
V +A +M ++ ++ + D + GIVT DI +I + +T + +MT++ I
Sbjct: 27 VVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTL-ETTIGDVMTKDVIT 85
Query: 130 VTSDSLAIEALQKM-VQGK----FRHLPVVE-NGEVIAIL 163
+ D+ +EA++KM + GK LPVV+ N +++ I+
Sbjct: 86 IHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGII 125
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 119 VSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVEN-GEVIAILDITKCLYDAI 173
V +MT+N I +EA +KM++ K LPV+++ +VI I+ T Y+ I
Sbjct: 10 VKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLI 65
>sp|Q57892|Y450_METJA Uncharacterized protein MJ0450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0450 PE=4 SV=1
Length = 186
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 56 LRLSKALTIPEGTIVSDACRRMASRRVDAVLLT--DANALLSGIVTDKDITTRVIAEGLR 113
L + K + + V D + M + V VL+ N + TDKDI +V+ L
Sbjct: 9 LIMKKPIVVSGDVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLIRKLP 68
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIAIL 163
PD+ V I + + + ++ EAL+ M + K L +V++G+++ ++
Sbjct: 69 PDKVKVEDISSGKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKIVGVI 118
>sp|Q58278|Y868_METJA Uncharacterized protein MJ0868 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0868 PE=4 SV=1
Length = 127
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 68 TIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNP 127
T +SD + MA + +V+++D GI+TD D V+ D+T +IMT NP
Sbjct: 22 TKLSDVIKTMAKYDISSVVVSDGETFW-GIITDTD----VLKHYNDLDKTA-EEIMTTNP 75
Query: 128 IFVTSDSLAIEALQKMVQGKFRHLPVVENGE--VIAIL---DITKCLYDAI 173
I V+ ++ +A++ M + HL V E ++ +L DI K D I
Sbjct: 76 ITVSPEAPLEKAVEIMAEKGIHHLYVKSPCEDKIVGVLSSKDIIKLFSDLI 126
>sp|Q47334|KPSF5_ECOLX Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli GN=kpsF
PE=3 SV=1
Length = 327
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
++ C+ M V++ DA L+GI+TD D+ R + + +++MTR P+
Sbjct: 237 ITSGCQGM-------VMVEDAEGGLAGIITDGDLR-RFMEKEDSLTSATAAQMMTREPLT 288
Query: 130 VTSDSLAIEALQKM 143
+ D++ IEA +KM
Sbjct: 289 LPEDTMIIEAEEKM 302
>sp|Q8D1Q8|KDSD_YERPE Arabinose 5-phosphate isomerase KdsD OS=Yersinia pestis GN=kdsD
PE=3 SV=2
Length = 328
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 42 SSVGGAGGERTVKKLRLSKAL-------TIPEGTIVSDACRRMASRRVDAVLLTDANALL 94
S GGA G + + LR+S + T+ + DA + + + ++ D + +
Sbjct: 192 SHPGGALGRKLL--LRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRI 249
Query: 95 SGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV 154
GI TD D+ RV G+ + ++ +MTR I V + LA++AL M L V
Sbjct: 250 KGIFTDGDLR-RVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVA 308
Query: 155 ENGEVIAILDITKCL 169
+ +++ ++ + L
Sbjct: 309 DGDQLLGVVHMHDML 323
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
+ VK+L + +T+PE V +A + M R+D + + D L G++T D+ R
Sbjct: 150 KLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVAR 205
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 54 KKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLR 113
++L + +TI V A M +D + + + ++ GI+T KDI R EG
Sbjct: 96 ERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVV-GIITKKDIAAR---EG-- 149
Query: 114 PDQTVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAILDITKCL 169
+V ++MT+ I V EAL+ M++ + LPVV E G+++ ++ ++ +
Sbjct: 150 ---KLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV 203
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 77 MASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTSDSLA 136
M R + A+ + D + + GIV+++ + + ++A V +IMT ++++
Sbjct: 109 MVERGIGALAVVDEDLRVVGIVSERHVIS-LLAN--VETHVKVKEIMTSEVVYLSPMDSL 165
Query: 137 IEALQKMVQGKFRHLPVVENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQ 196
E ++ M + + R LP+V E+ I+ I L +SR + A +AV
Sbjct: 166 FEGMRVMSERRIRRLPLVSGEELRGIVTIKDVL-SYVSREDVLARLKEGSRSAV------ 218
Query: 197 WGSNFSAPYAFIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALI 256
+ P +I + KP L+ V V +A M++ + ++
Sbjct: 219 ----YDTPLVYISS------KPVLA-----------VEDDVDVGLAVSLMKKHGIGALVV 257
Query: 257 VTGSKIQGILTSKDVLMRV 275
K +GI+T +DVL R+
Sbjct: 258 THDGKPRGIVTERDVLTRL 276
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 51 RTVKKLRLSKALTIPEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTR 106
+ VK+L +T+PE V +A + M R+D + + D L G++T D+ R
Sbjct: 150 KLVKELMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVAR 205
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 65 PEGTIVSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMT 124
PE T V A M +D + + + N + GI++ KDI R EG +V ++MT
Sbjct: 108 PEET-VDFALFLMEKHDIDGLPVVE-NEKVVGIISKKDIAAR---EG-----KLVKELMT 157
Query: 125 RNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIAILDITKCL 169
++ I V + EAL+ M++ + LPVV+ G +I ++ ++ +
Sbjct: 158 KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLV 203
>sp|Q8FD73|KDSD_ECOL6 Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=kdsD PE=3 SV=2
Length = 328
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 72 DACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVT 131
DA + + + ++ D N ++ GI TD D+ RV G+ + ++ +MT I V
Sbjct: 227 DALLEVTRKNLGMTVICDDNMMIEGIFTDGDLR-RVFDMGVDVRRLSIADVMTPGGIRVR 285
Query: 132 SDSLAIEALQKMVQGKFRHLPVVENGEVIAILDITKCL 169
LA+EAL M + V + ++ +L + L
Sbjct: 286 PGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLL 323
>sp|Q57564|Y100_METJA Uncharacterized protein MJ0100 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0100 PE=1 SV=1
Length = 509
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 117 TVVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVV-ENGEVIAIL---DITKCL 169
T+V I+++ PI S+ +EA + +++ HLP+V E+G+++ I+ DI K L
Sbjct: 388 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKAL 444
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 70 VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQTVVSKIMTRNPIF 129
+ +A + + ++ + + D + L GI+T DI A+ L ++ + +IMTRN I
Sbjct: 407 IMEAAKILIKHNINHLPIVDEHGKLVGIITSWDI-----AKALAQNKKTIEEIMTRNVIT 461
Query: 130 VTSDSLAIEALQKMVQGKFRHLPVVEN 156
D KM + +PVV++
Sbjct: 462 AHEDEPVDHVAIKMSKYNISGVPVVDD 488
>sp|Q49729|IMDH_MYCLE Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium leprae
(strain TN) GN=guaB PE=3 SV=1
Length = 529
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 65 PEGTI--VSDACRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQT-VVSK 121
P+ T+ V C R R+ + + D + L+GI+T++D+ V DQ+ V++
Sbjct: 138 PDNTLAQVGALCARF---RISGLPVVDDSGALAGIITNRDMRFEV-------DQSKQVAE 187
Query: 122 IMTRNPIFVTSDSLAIE-ALQKMVQGKFRHLPVVEN 156
+MT+ P+ ++ ++ + AL + + K LPVV+
Sbjct: 188 VMTKTPLITAAEGVSADAALGLLRRNKIEKLPVVDG 223
>sp|Q58799|Y1404_METJA Uncharacterized protein MJ1404 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1404 PE=4 SV=1
Length = 421
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 58 LSKALTIPEGTIVSDA-CRRMASRRVDAVLLTDANALLSGIVTDKDITTRVIAEGLRPDQ 116
+ KA + E T DA C + S + A ++ + ++ GI+TD DI R + D
Sbjct: 75 MYKAHCVHEDTPFLDAVCEMLDSGQRAAPIVNNVGKMV-GIITDYDIMARAAKSKIMKD- 132
Query: 117 TVVSKIMTRNPIFVTSDS 134
T V+KIMTRN I + +
Sbjct: 133 TKVTKIMTRNVITINEND 150
>sp|C3N8G6|CBIT_SULIY Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFMNLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
>sp|C3MTW8|CBIT_SULIM Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFMNLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
>sp|C3MJI5|CBIT_SULIL Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFMNLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
>sp|C4KJM8|CBIT_SULIK Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFMNLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
>sp|C3N0H8|CBIT_SULIA Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
M.16.27) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFMNLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
>sp|C3NJQ5|CBIT_SULIN Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=cbiT PE=3 SV=1
Length = 199
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 82 VDAVLLTDANALLSGI----VTDKDITTRVIAEGLRPDQTVVSKIMTRNPIFVTS 132
+DA+LL N +S + + +IT +IA+G++ V + +MTRNPIF+ S
Sbjct: 143 IDAILLETVNNAISAMENIGFINLEITEVIIAKGMKTK--VGTAMMTRNPIFIIS 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,539,790
Number of Sequences: 539616
Number of extensions: 3619095
Number of successful extensions: 19468
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 19175
Number of HSP's gapped (non-prelim): 339
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)