Citrus Sinensis ID: 041096

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-----
Protein Sequence
MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLEDIVSEDEESD
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHccccccEEEEcccccccccEEEccEEEEccEEEcccccccccccEEEEEEcccccccccccccEEEEEEEEEEEEEccccccccccEEEEEccccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEccccccccccccccccEEEcccccEEEEEEEcccccEEEEEEEEccccccccccEEEEcccccccccEEEEEcccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEHHHHHHHHccccccccccccccccEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEccccccHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEcHHHHHccccccccccccccccccccHHHHHHHHHHcccccHHccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccEEEcccEEccccEEEEccccccccccEEEEEEcccEEcEccccccEcEEEEEEEEEEEcccccccccEEEEEEEEccccccccHHHccccccccccccEEEEEEEEcccccccccccccEEEEEEccccccEEcccccEEEEEcccccEEEEEEEccccEEEEEEEccccccccccEEEEEEccHHHccccEEEEEEccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccEEEEEEcccccEEEEEEEccccHccHHHHHHHHHHHHHHHHHcHHHHHHHHcccccEEEEEEccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcEEEEEEccccccEEEccHccccccccccEEEEcHHHccHHHHHccccccccHHHHHHHEEHHHHcccccccccccccccEEEHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MPPKKLLVFFSIFLLNFSFVlsnnmnfdftsfnlrnitllgdsylrngvigltrelgvpasssgsliynnpvpffdqetnttasftsRFSFsinnvnpssfgdglaffispdnqilgsaggclglvnssqltknKFVAIefdtrldphfddpdenhigldidslesiktadpilqgidlksgNVITAWIDYKNDLRMLKVFMsysnlkpvtplLKVNIDLsgylkgnmyvgfsastegstelhMIQSwsfqtsgfrpvrpklhphnvsdssvvvetdfptsnstnkhhnkiglglgiagPAFFCVVLAVFGYIsikkwknmrtgiclradlvpgprefsYRELRSAtrgfhsnrilgrgafGNVYKAYFassgsvaavkrskhshegkTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEympngsldrmlyqdseNGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFnarlessftltagtmgylapeylqygtatektdvFSYGVVVLEVAcgrrpiereteghkmVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLscanpdssarpsMRRVFQILNneaeplvvpklkpcltfssvsltledivsedeesd
Flexible Loop (DISEMBL)
MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPilqgidlksgnVITAWIDYKNDLRMLKVFMSysnlkpvtpLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISikkwknmrTGICLradlvpgpREFSYRELRsatrgfhsnrilGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGrrpiereteghkmvnlVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNeaeplvvpklkpcltfssvsltledivsedeesd
Low Complexity Region (SEG)
MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEtnttasftsrfsfsINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLEDIVSEDEESD
Disordered region (IsUnstruct)
*****LLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGF********************************HNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAV*********KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCA***********RVFQILNNEAEPLVVPKLKPCLTFSSVSLTL***********
Disordered Region (DISOPRED)
**PKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVR***********SVV****************KIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMR***CLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK**********EFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE*****HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT*******************
Disordered Region (DISEMBL)
MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSG**************KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLED*********
Disordered Region (DISPRO)
*PPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETD*********HHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLE**********
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLEDIVSEDEESD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	645	2.2.26 [Sep-21-2011]
Q9FHG4	681	Probable L-type lectin-do	yes	no	0.993	0.941	0.655	0.0
Q9LYX1	711	L-type lectin-domain cont	no	no	0.989	0.897	0.465	1e-159
Q9LFH9	715	L-type lectin-domain cont	no	no	0.976	0.881	0.460	1e-154
Q9FHX3	691	L-type lectin-domain cont	no	no	0.955	0.891	0.392	1e-121
O81292	674	L-type lectin-domain cont	no	no	0.902	0.863	0.375	1e-104
Q9M2S4	684	L-type lectin-domain cont	no	no	0.886	0.836	0.388	1e-103
Q9FG33	652	Probable L-type lectin-do	no	no	0.888	0.878	0.36	1e-100
O80939	675	L-type lectin-domain cont	no	no	0.913	0.872	0.35	1e-97
Q9LXA5	651	L-type lectin-domain cont	no	no	0.905	0.897	0.364	8e-97
O81291	669	L-type lectin-domain cont	no	no	0.922	0.889	0.353	2e-96

>sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/671 (65%), Positives = 532/671 (79%), Gaps = 30/671 (4%)

Query: 4   KKLLVFFSIFLLNFS-----FVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV 58
           +KLLV F  ++   S     FV S+NMNF F SF +RN+T LGDS+LRNGV+GLTRELGV
Sbjct: 5   RKLLVIFFTWITALSMSKPIFVSSDNMNFTFKSFTIRNLTFLGDSHLRNGVVGLTRELGV 64

Query: 59  PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP--SSFGDGLAFFISPDNQIL 116
           P +SSG++IYNNP+ F+D ++NTTASF++ FSF++ N+NP  +S GDGLAFF+S DN  L
Sbjct: 65  PDTSSGTVIYNNPIRFYDPDSNTTASFSTHFSFTVQNLNPDPTSAGDGLAFFLSHDNDTL 124

Query: 117 GSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG 176
           GS GG LGLVNSSQ  KN+FVAIEFDT+LDPHF+DP+ NHIGLD+DSL SI T+DP+L  
Sbjct: 125 GSPGGYLGLVNSSQPMKNRFVAIEFDTKLDPHFNDPNGNHIGLDVDSLNSISTSDPLLSS 184

Query: 177 -IDLKSGNVITAWIDYKNDLRMLKVFMSYSN-----LKPVTPLLKVNIDLSGYLKGNMYV 230
            IDLKSG  IT+WIDYKNDLR+L VF+SY++      KP  PLL VNIDLS +L G MYV
Sbjct: 185 QIDLKSGKSITSWIDYKNDLRLLNVFLSYTDPVTTTKKPEKPLLSVNIDLSPFLNGEMYV 244

Query: 231 GFSASTEGSTELHMIQSWSFQTSGFRPVRPKL-HPHNVSDSSVVVETDFPTSNSTNKHHN 289
           GFS STEGSTE+H+I++WSF+TSGF PVR K  H HNVSDSSVV +      +   +H +
Sbjct: 245 GFSGSTEGSTEIHLIENWSFKTSGFLPVRSKSNHLHNVSDSSVVNDDPVVIPSKKRRHRH 304

Query: 290 KIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRG 349
            + +GLGI+ P   C+ L VFGY ++KKWK+++    L+ +L+ G REFSY+EL +AT+G
Sbjct: 305 NLAIGLGISCPVLICLALFVFGYFTLKKWKSVKAEKELKTELITGLREFSYKELYTATKG 364

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQ 408
           FHS+R++GRGAFGNVY+A F SSG+++AVKRS+H S EGKTEFLAELSIIACLRHKNLVQ
Sbjct: 365 FHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLAELSIIACLRHKNLVQ 424

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLHQE 467
           L GWC EKGELLLVYE+MPNGSLD++LYQ+S+ G V L W HRLNI +GLASAL+YLH E
Sbjct: 425 LQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLNIAIGLASALSYLHHE 484

Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYG 514
           CEQQV+HRDIK SNIMLD NFNARL                 TLTAGTMGYLAPEYLQYG
Sbjct: 485 CEQQVVHRDIKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTLTAGTMGYLAPEYLQYG 544

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
           TATEKTD FSYGVV+LEVACGRRPI++E E  K VNLVDWVW L++EGR++EA D+RL G
Sbjct: 545 TATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWVWRLHSEGRVLEAVDERLKG 604

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTL 634
            F+E+ MK+LLLVGL CA+PDS+ RPSMRRV QILNNE EP  VPK+KP L+F S  L+L
Sbjct: 605 EFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNEIEPSPVPKMKPTLSF-SCGLSL 663

Query: 635 EDIVSEDEESD 645
           +DIVSEDEE D
Sbjct: 664 DDIVSEDEEGD 674

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LYX1|LRK82_ARATH L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana GN=LECRK82 PE=2 SV=1

 Score =  561 bits (1445), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 320/687 (46%), Positives = 425/687 (61%), Gaps = 49/687 (7%)

Query: 1   MPPKKLLVFFSIFLLNFSFVLSNNMNFDF--TSFNL-----RNITLLGDSYLRNGVIGLT 53
           +PP+   V+ ++  +  SF+ S+++  DF  T F+L      ++ LLGD++L NG I LT
Sbjct: 4   LPPRFFSVYSTLIHILASFLCSSDVRGDFPATRFDLGTLTLSSLKLLGDAHLNNGTIKLT 63

Query: 54  RELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN 113
           REL VP S++G  +Y  PV F   ET + ASFT+ FSFS+ N+NPSS G GLAF ISPD 
Sbjct: 64  RELSVPTSTAGKALYGKPVKFRHPETKSPASFTTYFSFSVTNLNPSSIGGGLAFVISPDE 123

Query: 114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPI 173
             LGS GG LGL   +  + + FVA+EFDT +D  F D + NH+GLD++++ S   AD  
Sbjct: 124 DYLGSTGGFLGLTEETG-SGSGFVAVEFDTLMDVQFKDVNGNHVGLDLNAVVSAAVADLG 182

Query: 174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFS 233
              IDLKSGN + +WI Y    R+L V++SYSNLKP +P+L V +DL  Y+  +M+VGFS
Sbjct: 183 NVDIDLKSGNAVNSWITYDGSGRVLTVYVSYSNLKPKSPILSVPLDLDRYVSDSMFVGFS 242

Query: 234 ASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDS------------SVVVETDFPTS 281
            ST+GSTE+H +  WSF +S            N                +V  +T  P+S
Sbjct: 243 GSTQGSTEIHSVDWWSFSSSFEESSESPPPMPNSPPPSSPSSSITPSLSTVRRKTADPSS 302

Query: 282 NSTNKHHNK---IGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREF 338
           +  NK   K      G+  AG  F  +   V  ++  KK K  R    L ++++  PREF
Sbjct: 303 SCRNKLCKKSPAAVAGVVTAGAFFLALFAGVIIWVYSKKIKYTRKSESLASEIMKSPREF 362

Query: 339 SYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSII 398
           +Y+EL+ AT  F S+R++G GAFG VYK     SG + A+KR  H  +G TEFL+ELS+I
Sbjct: 363 TYKELKLATDCFSSSRVIGNGAFGTVYKGILQDSGEIIAIKRCSHISQGNTEFLSELSLI 422

Query: 399 ACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
             LRH+NL++L G+C EKGE+LL+Y+ MPNGSLD+ LY   E+   L W HR  I++G+A
Sbjct: 423 GTLRHRNLLRLQGYCREKGEILLIYDLMPNGSLDKALY---ESPTTLPWPHRRKILLGVA 479

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGY 505
           SAL YLHQECE Q+IHRD+K SNIMLDANFN +L                 T  AGTMGY
Sbjct: 480 SALAYLHQECENQIIHRDVKTSNIMLDANFNPKLGDFGLARQTEHDKSPDATAAAGTMGY 539

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM-----VNLVDWVWGLYA 560
           LAPEYL  G ATEKTDVFSYG VVLEV  GRRPI R      +      +LVDWVWGLY 
Sbjct: 540 LAPEYLLTGRATEKTDVFSYGAVVLEVCTGRRPITRPEPEPGLRPGLRSSLVDWVWGLYR 599

Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK 620
           EG+++ A D+RL+  FN +EM R+++VGL+C+ PD   RP+MR V QIL  EA+   VP 
Sbjct: 600 EGKLLTAVDERLS-EFNPEEMSRVMMVGLACSQPDPVTRPTMRSVVQILVGEADVPEVPI 658

Query: 621 LKPCLTFSSVS----LTLEDIVSEDEE 643
            KP  + S  +    LTL+D VS+  E
Sbjct: 659 AKPSSSMSFSTSELLLTLQDSVSDCNE 685

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana GN=LECRK81 PE=1 SV=1

 Score =  546 bits (1407), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 316/686 (46%), Positives = 429/686 (62%), Gaps = 56/686 (8%)

Query: 6   LLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGS 65
            L FF   LL F F  +    FDF++  + N+ LLGD+ L NG++GLTR+L VP S +G 
Sbjct: 4   FLSFFISILLCF-FNGATTTQFDFSTLAISNLKLLGDARLSNGIVGLTRDLSVPNSGAGK 62

Query: 66  LIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGL 125
           ++Y+NP+ F    T+   SF+S FSFSI NVNPSS G GLAF ISPD   +G AGG LGL
Sbjct: 63  VLYSNPIRFRQPGTHFPTSFSSFFSFSITNVNPSSIGGGLAFVISPDANSIGIAGGSLGL 122

Query: 126 VNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVI 185
              +  + +KFVA+EFDT +D  F D + NH+G D++ + S  + D     IDLKSGN I
Sbjct: 123 TGPNG-SGSKFVAVEFDTLMDVDFKDINSNHVGFDVNGVVSSVSGDLGTVNIDLKSGNTI 181

Query: 186 TAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMI 245
            +WI+Y    R+  V +SYSNLKP  P+L   +DL  Y+   M+VGFS ST+GSTE+H I
Sbjct: 182 NSWIEYDGLTRVFNVSVSYSNLKPKVPILSFPLDLDRYVNDFMFVGFSGSTQGSTEIHSI 241

Query: 246 QSWSFQTSGFRPVR-------PKLHPHNVSDSSV-----------------VVETDFPTS 281
           + WSF +S    +        P+ +  N   +SV                    T   TS
Sbjct: 242 EWWSFSSSFGSSLGSGSGSPPPRANLMNPKANSVKSPPPLASQPSSSAIPISSNTQLKTS 301

Query: 282 NSTNKHHNKIG------LGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGP 335
           +S++ H            G+  AG  F  +      ++  KK+K +       ++++  P
Sbjct: 302 SSSSCHSRFCKENPGTIAGVVTAGAFFLALFAGALFWVYSKKFKRVERSDSFASEIIKAP 361

Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAE 394
           +EFSY+EL++ T+ F+ +RI+G GAFG VY+     +G + AVKR  H S + K EFL+E
Sbjct: 362 KEFSYKELKAGTKNFNESRIIGHGAFGVVYRGILPETGDIVAVKRCSHSSQDKKNEFLSE 421

Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
           LSII  LRH+NLV+L GWC EKGE+LLVY+ MPNGSLD+ L+   E+   L W HR  I+
Sbjct: 422 LSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALF---ESRFTLPWDHRKKIL 478

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAG 501
           +G+ASAL YLH+ECE QVIHRD+K+SNIMLD +FNA+L                 T+ AG
Sbjct: 479 LGVASALAYLHRECENQVIHRDVKSSNIMLDESFNAKLGDFGLARQIEHDKSPEATVAAG 538

Query: 502 TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE--TEGHKM---VNLVDWVW 556
           TMGYLAPEYL  G A+EKTDVFSYG VVLEV  GRRPIE++   + H +    NLV+WVW
Sbjct: 539 TMGYLAPEYLLTGRASEKTDVFSYGAVVLEVVSGRRPIEKDLNVQRHNVGVNPNLVEWVW 598

Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL 616
           GLY EG++  AAD RL G F+E EM R+L+VGL+C++PD + RP+MR V Q+L  EA+  
Sbjct: 599 GLYKEGKVSAAADSRLEGKFDEGEMWRVLVVGLACSHPDPAFRPTMRSVVQMLIGEADVP 658

Query: 617 VVPKLKPCLTFSS--VSLTLEDIVSE 640
           VVPK +P ++FS+  + L+L+D +S+
Sbjct: 659 VVPKSRPTMSFSTSHLLLSLQDTLSD 684

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FHX3|LRKS6_ARATH L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana GN=LECRKS6 PE=2 SV=1

 Score =  436 bits (1120), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/683 (39%), Positives = 384/683 (56%), Gaps = 67/683 (9%)

Query: 6   LLVFFSIFLLNFSF-VLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV------ 58
           L++F  I  L+  F  LS+       S  L+N+TL GD++ R+  I LT++         
Sbjct: 8   LVIFHLILFLSLDFPTLSHRF-----SPPLQNLTLYGDAFFRDRTISLTQQQPCFPSVTT 62

Query: 59  ----PASSS-GSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN 113
               P+SS  G  +Y  P+ F +  TNTTASF+ RFSFSI       FGDG AF I+ + 
Sbjct: 63  PPSKPSSSGIGRALYVYPIKFLEPSTNTTASFSCRFSFSIIASPSCPFGDGFAFLITSNA 122

Query: 114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPI 173
                + G LGL N      + F+A+EFDTR DP   D ++NH+G+D+ S+ S+ + D I
Sbjct: 123 DSFVFSNGFLGLPNPD----DSFIAVEFDTRFDPVHGDINDNHVGIDVSSIFSVSSVDAI 178

Query: 174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFS 233
            +G DLKSG  + AWI+Y + L++++V++ YS +KP +P+L   IDLSG +K  M+VGFS
Sbjct: 179 SKGFDLKSGKKMMAWIEYSDVLKLIRVWVGYSRVKPTSPVLSTQIDLSGKVKEYMHVGFS 238

Query: 234 ASTEG-STELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNK-- 290
           AS  G  + LH+++ W F+T G      +       +  +V   +   S +  + H K  
Sbjct: 239 ASNAGIGSALHIVERWKFRTFGSHSDAIQEEEEEKDEECLVCSGE--VSENPKEIHRKGF 296

Query: 291 ------IGLGLGI----AGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSY 340
                 +GL + +     G A   +++A   +  I   K +       + LV  P   S 
Sbjct: 297 NFRVTVVGLKIPVWSLLPGLAAIVILVAFIVFSLICGKKRISEEADSNSGLVRMPGRLSL 356

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAEL-S 396
            E++SAT GF+ N I+G+GA   VY+    S GSV AVKR    H     +  F  E  +
Sbjct: 357 AEIKSATSGFNENAIVGQGASATVYRGSIPSIGSV-AVKRFDREHWPQCNRNPFTTEFTT 415

Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD-----SENGVLLSWYHRL 451
           +   LRHKNLVQ  GWC+E  E  LV+EY+PNGSL   L++      SE  ++LSW  R+
Sbjct: 416 MTGYLRHKNLVQFQGWCSEGTETALVFEYLPNGSLSEFLHKKPSSDPSEEIIVLSWKQRV 475

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----------------S 495
           NI++G+ASALTYLH+ECE+Q+IHRD+K  NIMLDA FNA+L                  +
Sbjct: 476 NIILGVASALTYLHEECERQIIHRDVKTCNIMLDAEFNAKLGDFGLAEIYEHSALLAGRA 535

Query: 496 FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV 555
            TL AGTMGYLAPEY+  G  +EKTDV+S+GVVVLEV  GRRP+     G     LVD +
Sbjct: 536 ATLPAGTMGYLAPEYVYTGVPSEKTDVYSFGVVVLEVCTGRRPV-----GDDGAVLVDLM 590

Query: 556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP 615
           W  +  G++++ AD  L   F+ +EM+R+L+VG+ CA+PDS  RP ++   +I+  EA  
Sbjct: 591 WSHWETGKVLDGADIMLREEFDAEEMERVLMVGMVCAHPDSEKRPRVKDAVRIIRGEAPL 650

Query: 616 LVVPKLKPCLTFSSVSLTLEDIV 638
            V+P  +P L     +   E IV
Sbjct: 651 PVLPARRPLLRIRPANEAEEMIV 673

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  378 bits (970), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/634 (37%), Positives = 351/634 (55%), Gaps = 52/634 (8%)

Query: 22  SNNMNFDFTSFNL--RNITLLGDSYL-RNGVIGLTRELGVPASSSGSLIYNNPVPFFDQE 78
           S ++NF + SF+    NI++ G + +  NG++ LT +  +   S+G   Y  P+ F D  
Sbjct: 24  SQSLNFTYNSFHRPPTNISIQGIATVTSNGILKLTDKTVI---STGHAFYTEPIRFKDSP 80

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGC--LGLVNSSQL--TKN 134
            +T +SF++ F   I +  P+  G G+AFFI+P N +L SA     LGL +S+      N
Sbjct: 81  NDTVSSFSTTFVIGIYSGIPTISGHGMAFFIAP-NPVLSSAMASQYLGLFSSTNNGNDTN 139

Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA-----DPILQ--GIDLKSGNVITA 187
             +A+EFDT ++P FDD ++NH+G++I+SL S+K++     D I Q   + L S   +  
Sbjct: 140 HILAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLTLISRKRMQV 199

Query: 188 WIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQ 246
           W+DY +    + V M+ +  +KP   L+ V  DLS     +MY+GFSA+T      H + 
Sbjct: 200 WVDYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQDMYLGFSAATGYVLSEHFVF 259

Query: 247 SWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNK---HHNKIGLGLGIAGPAFF 303
            WSF   G     P L    V          FP    T+    + N++ L   +  P  F
Sbjct: 260 GWSFMVKG--KTAPPLTLSKVP--------KFPRVGPTSLQRFYKNRMPLFSLLLIPVLF 309

Query: 304 CVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGN 363
            V L       +++ +          +   G     +++L  AT+GF    +LG G FG 
Sbjct: 310 VVSLIFLVRFIVRRRRKFAEEFE-DWETEFGKNRLRFKDLYYATKGFKDKDLLGSGGFGR 368

Query: 364 VYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV 422
           VY+    ++    AVKR S  S +G  EF+AE+  I  + H+NLV LLG+C  + ELLLV
Sbjct: 369 VYRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLV 428

Query: 423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI 482
           Y+YMPNGSLD+ LY   E  V L W  R N+++G+AS L YLH+E EQ VIHRDIKASN+
Sbjct: 429 YDYMPNGSLDKYLYDCPE--VTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKASNV 486

Query: 483 MLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVV 529
           +LDA +N RL             +   T   GT GYLAP++++ G AT  TDVF++GV++
Sbjct: 487 LLDAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLL 546

Query: 530 LEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGL 589
           LEVACGRRPIE E E  + V LVD V+G + EG I++A D  L   +++ E++ +L +GL
Sbjct: 547 LEVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVLKLGL 606

Query: 590 SCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
            C++ D   RP+MR+V Q L  +A    +P L P
Sbjct: 607 LCSHSDPQVRPTMRQVLQYLRGDA---TLPDLSP 637

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1

 Score =  377 bits (969), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 243/626 (38%), Positives = 336/626 (53%), Gaps = 54/626 (8%)

Query: 26  NFDFTSFNLR--NITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTT 82
           +F F  F     N+TL G + +   G I LT E        G   Y+ P+ F     N  
Sbjct: 25  DFSFIGFKKASPNLTLNGVAEIAPTGAIRLTTET---QRVIGHAFYSLPIRFKPIGVNRA 81

Query: 83  ASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGS-AGGCLGLVNSSQLT-KNKFVAIE 140
            SF++ F+ ++     +  G GLAF I+P   + GS     LGL+NSS++   + F A+E
Sbjct: 82  LSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLNSSRVNFSSHFFAVE 141

Query: 141 FDTRLDPHFDDPDENHIGLDIDSLES-IKT------ADPILQGIDLKSGNVITAWIDYKN 193
           FDT  D  F+D ++NH+G+DI+S+ES I T      A+   + + L  G VI AWIDY +
Sbjct: 142 FDTVRDLEFEDINDNHVGIDINSMESSISTPAGYFLANSTKKELFLDGGRVIQAWIDYDS 201

Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
           + + L V +S  + KP   LL  ++DLS  L   MYVGFSAST      H I  W+F  S
Sbjct: 202 NKKRLDVKLSPFSEKPKLSLLSYDVDLSSVLGDEMYVGFSASTGLLASSHYILGWNFNMS 261

Query: 254 GFR-----PVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLA 308
           G       P  P++ P ++       ++              + LG+ +        VL 
Sbjct: 262 GEAFSLSLPSLPRI-PSSIKKRKKKRQS--------------LILGVSLLCSLLIFAVLV 306

Query: 309 VFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAY 368
                 ++K K+         D   GP  FSYREL+ AT GF    +LG G FG VYK  
Sbjct: 307 AASLFVVRKVKDEDRVEEWELDF--GPHRFSYRELKKATNGFGDKELLGSGGFGKVYKGK 364

Query: 369 FASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP 427
              S    AVKR  H S +G  EF++E+S I  LRH+NLVQLLGWC  + +LLLVY++MP
Sbjct: 365 LPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLVQLLGWCRRRDDLLLVYDFMP 424

Query: 428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN 487
           NGSLD  L+ D    V+L+W  R  I+ G+AS L YLH+  EQ VIHRDIKA+N++LD+ 
Sbjct: 425 NGSLDMYLF-DENPEVILTWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIKAANVLLDSE 483

Query: 488 FNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC 534
            N R+             +   T   GT GYLAPE  + G  T  TDV+++G V+LEVAC
Sbjct: 484 MNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAFGAVLLEVAC 543

Query: 535 GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANP 594
           GRRPIE      ++V +VDWVW  +  G I +  D+RLNG F+E+E+  ++ +GL C+N 
Sbjct: 544 GRRPIETSALPEELV-MVDWVWSRWQSGDIRDVVDRRLNGEFDEEEVVMVIKLGLLCSNN 602

Query: 595 DSSARPSMRRVFQILNNE-AEPLVVP 619
               RP+MR+V   L  +   P VVP
Sbjct: 603 SPEVRPTMRQVVMYLEKQFPSPEVVP 628

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1

 Score =  366 bits (939), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/650 (36%), Positives = 369/650 (56%), Gaps = 77/650 (11%)

Query: 25  MNFDFTSFNLRN-ITLLGD-SYLRNGVIGLTREL-----GVPASSSGSLIYNNPVPFFDQ 77
           + FDF  FN+ N + L+ D SY+  G I +T ++     G  A+ +G  +Y  P   + +
Sbjct: 25  LKFDFPGFNVSNELELIRDNSYIVFGAIQVTPDVTGGPGGTIANQAGRALYKKPFRLWSK 84

Query: 78  ETNTTASFTSRFSFSINN-VNPSSFGDGLAFFISPDNQI-LGSAGGCLGLVN--SSQLTK 133
             + +A+F + F  +I+N  +P   G+GLAF ++P+      S+G  LG+VN  +++  +
Sbjct: 85  --HKSATFNTTFVINISNKTDPG--GEGLAFVLTPEETAPQNSSGMWLGMVNERTNRNNE 140

Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           ++ V++EFDTR   H DD D NH+ L+++++ S+       +GI + SG  +TA + Y  
Sbjct: 141 SRIVSVEFDTR-KSHSDDLDGNHVALNVNNINSVVQESLSGRGIKIDSGLDLTAHVRY-- 197

Query: 194 DLRMLKVFMSYS--NLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ 251
           D + L V++S +    +    +    IDLS YL   +YVGF+AST   TEL+ ++SWSF+
Sbjct: 198 DGKNLSVYVSRNLDVFEQRNLVFSRAIDLSAYLPETVYVGFTASTSNFTELNCVRSWSFE 257

Query: 252 TSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVF- 310
                               + ++ D               L L I  P  F V +  F 
Sbjct: 258 -------------------GLKIDGDGNM------------LWLWITIPIVFIVGIGAFL 286

Query: 311 GYISIK-KWKNMRTGICLRADL---VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYK 366
           G + ++ + K   T   + A+L      P++F  REL+ AT  F +   LG+G FG V+K
Sbjct: 287 GALYLRSRSKAGETNPDIEAELDNCAANPQKFKLRELKRATGNFGAENKLGQGGFGMVFK 346

Query: 367 AYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY 425
             +   G   AVKR S+ SH+GK EF+AE++ I  L H+NLV+LLGWC E+ E LLVYEY
Sbjct: 347 GKW--QGRDIAVKRVSEKSHQGKQEFIAEITTIGNLNHRNLVKLLGWCYERKEYLLVYEY 404

Query: 426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD 485
           MPNGSLD+ L+ + ++   L+W  R NI+ GL+ AL YLH  CE++++HRDIKASN+MLD
Sbjct: 405 MPNGSLDKYLFLEDKSRSNLTWETRKNIITGLSQALEYLHNGCEKRILHRDIKASNVMLD 464

Query: 486 ANFNARL---------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVL 530
           ++FNA+L                 S    AGT GY+APE    G AT +TDV+++GV++L
Sbjct: 465 SDFNAKLGDFGLARMIQQSEMTHHSTKEIAGTPGYMAPETFLNGRATVETDVYAFGVLML 524

Query: 531 EVACGRRP---IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLV 587
           EV  G++P   + ++ + +   ++V+W+W LY  G I +AAD  +   F+++EMK +LL+
Sbjct: 525 EVVSGKKPSYVLVKDNQNNYNNSIVNWLWELYRNGTITDAADPGMGNLFDKEEMKSVLLL 584

Query: 588 GLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTLEDI 637
           GL+C +P+ + RPSM+ V ++L  E  P  VP  +P   + ++  +  DI
Sbjct: 585 GLACCHPNPNQRPSMKTVLKVLTGETSPPDVPTERPAFVWPAMPPSFSDI 634

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  357 bits (917), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 231/660 (35%), Positives = 346/660 (52%), Gaps = 71/660 (10%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
           LNF++   NN     T  +++ IT    +   NG++ LT         +G   Y  P+ F
Sbjct: 25  LNFAY---NNGFNPPTDLSIQGIT----TVTPNGLLKLTN---TTVQKTGHAFYTKPIRF 74

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQI-LGSAGGCLGLVN--SSQL 131
            D    T +SF++ F F+I++      G G+AF ++P+  +  G+    +GL N  ++  
Sbjct: 75  KDSPNGTVSSFSTSFVFAIHSQIAILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGN 134

Query: 132 TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADP-------ILQGIDLKSGNV 184
             N   A+E DT L   F+D ++NH+G+DI+SL+S++++           + + L S   
Sbjct: 135 ETNHVFAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLTLISRKP 194

Query: 185 ITAWIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELH 243
           +  W+DY      + V M+ ++  KP  PL+    DLS  L  +MYVGFS++T      H
Sbjct: 195 MQVWVDYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDMYVGFSSATGSVLSEH 254

Query: 244 MIQSWSFQTS--------GFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGL 295
            I  WSF  +           P  P+  P  +S+                    KIG+ L
Sbjct: 255 YILGWSFGLNEKAPPLALSRLPKLPRFEPKRISE------------------FYKIGMPL 296

Query: 296 GIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRI 355
                + F +   +F    I + +          +   G   F +++L  AT+GF    +
Sbjct: 297 ----ISLFLIFSFIFLVCYIVRRRRKFAEELEEWEKEFGKNRFRFKDLYYATKGFKEKGL 352

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG G FG+VYK     +    AVKR  H S +G  EF+AE+  I  + H+NLV LLG+C 
Sbjct: 353 LGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCR 412

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
            +GELLLVY+YMPNGSLD+ LY   E  V L+W  R+ +++G+AS L YLH+E EQ VIH
Sbjct: 413 RRGELLLVYDYMPNGSLDKYLYNTPE--VTLNWKQRIKVILGVASGLFYLHEEWEQVVIH 470

Query: 475 RDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTD 521
           RD+KASN++LD   N RL             +   T   GT+GYLAPE+ + G AT  TD
Sbjct: 471 RDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATD 530

Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEM 581
           VF++G  +LEVACGRRPIE + E  +   LVDWV+GL+ +G I+ A D  +    +E E+
Sbjct: 531 VFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSECDEKEV 590

Query: 582 KRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPC-LTFSSVSLTLEDIVSE 640
           + +L +GL C++ D  ARPSMR+V   L  +A+   +P+L P  L+ S +   + D  SE
Sbjct: 591 EMVLKLGLLCSHSDPRARPSMRQVLHYLRGDAK---LPELSPLDLSGSGMMFGVHDGFSE 647

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1

 Score =  355 bits (910), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 240/658 (36%), Positives = 354/658 (53%), Gaps = 74/658 (11%)

Query: 7   LVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSL 66
           ++ FS F+L   FV S   N      ++  I   GD+   NG + LT         +G  
Sbjct: 5   ILLFS-FVLVLPFVCSVQFNISRFGSDVSEIAYQGDARA-NGAVELTNI--DYTCRAGWA 60

Query: 67  IYNNPVPFFDQETNTTASFTSRFSFSIN--NVNPSSFGDGLAFFISPDNQIL--GSAGGC 122
            Y   VP ++  T+  + F++RFSF I+  NV   ++G G AFF++P    L   SAGG 
Sbjct: 61  TYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGF 120

Query: 123 LGLVNSSQLTKNKF--VAIEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDL 179
           LGL N +    + F  V +EFDT  +P +D  D ++H+G++ +SL S           + 
Sbjct: 121 LGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQ 180

Query: 180 KSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPL----LKVNIDLSGYLKGNMYVGFSAS 235
             G V+   I Y +  R L V  +Y       PL    L   IDLS  L   + +GFSA+
Sbjct: 181 DIGRVL---IFYDSARRNLSVSWTYDLTS--DPLENSSLSYIIDLSKVLPSEVTIGFSAT 235

Query: 236 TEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGL 295
           + G TE + + SW F +S        L   ++  S                 ++K G+ +
Sbjct: 236 SGGVTEGNRLLSWEFSSS--------LELIDIKKS----------------QNDKKGMII 271

Query: 296 GIAGPAFFCVVLAVFGYISIKKWKNMR---------TGICLRADLVPGPREFSYRELRSA 346
           GI+   F  +   +   I   K K  +         T I    +   GPR+F+Y++L SA
Sbjct: 272 GISVSGFVLLTFFITSLIVFLKRKQQKKKAEETENLTSINEDLERGAGPRKFTYKDLASA 331

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKN 405
              F  +R LG G FG VY+ Y  S   + A+K+ +  S +GK EF+ E+ II+ LRH+N
Sbjct: 332 ANNFADDRKLGEGGFGAVYRGYLNSLDMMVAIKKFAGGSKQGKREFVTEVKIISSLRHRN 391

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LVQL+GWC EK E L++YE+MPNGSLD  L+    +   L+W+ R  I +GLASAL YLH
Sbjct: 392 LVQLIGWCHEKDEFLMIYEFMPNGSLDAHLFGKKPH---LAWHVRCKITLGLASALLYLH 448

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLT--------------AGTMGYLAPEYL 511
           +E EQ V+HRDIKASN+MLD+NFNA+L   F L               AGT GY+APEY+
Sbjct: 449 EEWEQCVVHRDIKASNVMLDSNFNAKL-GDFGLARLMDHELGPQTTGLAGTFGYMAPEYI 507

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
             G A++++DV+S+GVV LE+  GR+ ++ R+     + NLV+ +W LY +G +I A D+
Sbjct: 508 STGRASKESDVYSFGVVTLEIVTGRKSVDRRQGRVEPVTNLVEKMWDLYGKGEVITAIDE 567

Query: 571 RLN-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTF 627
           +L  G F+E + + L++VGL CA+PD + RPS+++  Q+LN EA    +P   P  T+
Sbjct: 568 KLRIGGFDEKQAECLMIVGLWCAHPDVNTRPSIKQAIQVLNLEAPVPHLPTKMPVATY 625

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score =  353 bits (906), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 229/647 (35%), Positives = 348/647 (53%), Gaps = 52/647 (8%)

Query: 9   FFSIFLLNFSF--VLSNNMNFDFTSFNLR----NITLLGDSYLR-NGVIGLTRELGVPAS 61
            F+IF L+F +  + S++   DFT    R    +I++LG + +  NG++ LT        
Sbjct: 6   LFTIFFLSFFWQSLKSSSQIIDFTYNGFRPPPTDISILGIATITPNGLLKLT---NTTMQ 62

Query: 62  SSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQI-LGSAG 120
           S+G   Y  P+ F D    T +SF++ F F+I++  P     G+AF I+P+ ++  GS  
Sbjct: 63  STGHAFYTKPIRFKDSPNGTVSSFSTTFVFAIHSQIP--IAHGMAFVIAPNPRLPFGSPL 120

Query: 121 GCLGLVNSSQL--TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA-------D 171
             LGL N +     +N   A+E DT ++  F+D + NH+G+DI+SL S+K++       +
Sbjct: 121 QYLGLFNVTNNGNVRNHVFAVELDTIMNIEFNDTNNNHVGIDINSLNSVKSSPAGYWDEN 180

Query: 172 PILQGIDLKSGNVITAWIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKGNMYV 230
                + L S   +  W+D+     ++ V M+ +  +KP  PL+ +  DLS  L  +M+V
Sbjct: 181 DQFHNLTLISSKRMQVWVDFDGPTHLIDVTMAPFGEVKPRKPLVSIVRDLSSVLLQDMFV 240

Query: 231 GFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNK 290
           GFS++T        +  WSF  +G      +  P  +S    +   D   +     + N 
Sbjct: 241 GFSSATGNIVSEIFVLGWSFGVNG------EAQPLALSKLPRLPVWDLKPTRVYRFYKNW 294

Query: 291 IGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGF 350
           + L   +  P    + L  F    I K +          +   G     +++L  AT+GF
Sbjct: 295 VPLISLLLIPFLLIIFLVRF----IMKRRRKFAEEVEDWETEFGKNRLRFKDLYYATKGF 350

Query: 351 HSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
               ILG G FG+VYK     +    AVKR S  S +G  EF+AE+  I  + H+NLV L
Sbjct: 351 KDKNILGSGGFGSVYKGIMPKTKKEIAVKRVSNESRQGLKEFVAEIVSIGQMSHRNLVPL 410

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +G+C  + ELLLVY+YMPNGSLD+ LY   E  V L W  R  ++ G+ASAL YLH+E E
Sbjct: 411 VGYCRRRDELLLVYDYMPNGSLDKYLYNSPE--VTLDWKQRFKVINGVASALFYLHEEWE 468

Query: 470 QQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTA 516
           Q VIHRD+KASN++LDA  N RL             +   T   GT GYLAP++++ G A
Sbjct: 469 QVVIHRDVKASNVLLDAELNGRLGDFGLAQLCDHGSDPQTTRVVGTWGYLAPDHIRTGRA 528

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
           T  TDVF++GV++LEVACGRRPIE   +  + V LVDWV+  + E  I++A D  L   +
Sbjct: 529 TTTTDVFAFGVLLLEVACGRRPIEINNQSGERVVLVDWVFRFWMEANILDAKDPNLGSEY 588

Query: 577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
           ++ E++ +L +GL C++ D  ARP+MR+V Q L  +A   ++P L P
Sbjct: 589 DQKEVEMVLKLGLLCSHSDPLARPTMRQVLQYLRGDA---MLPDLSP 632

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	645
255563468	663	kinase, putative [Ricinus communis] gi|2	0.992	0.965	0.720	0.0
147799284	2665	hypothetical protein VITISV_007763 [Viti	0.967	0.234	0.705	0.0
225461937	679	PREDICTED: probable L-type lectin-domain	0.967	0.918	0.705	0.0
224114497	663	predicted protein [Populus trichocarpa]	0.989	0.962	0.703	0.0
296089928	878	unnamed protein product [Vitis vinifera]	0.959	0.705	0.705	0.0
224056469	664	predicted protein [Populus trichocarpa]	0.992	0.963	0.690	0.0
449461104	671	PREDICTED: probable L-type lectin-domain	0.984	0.946	0.684	0.0
15241048	681	concanavalin A-like lectin kinase-like p	0.993	0.941	0.655	0.0
297793053	680	hypothetical protein ARALYDRAFT_495664 [	0.989	0.938	0.653	0.0
356553507	716	PREDICTED: probable L-type lectin-domain	0.924	0.832	0.6	0.0

>gi|255563468|ref|XP_002522736.1| kinase, putative [Ricinus communis] gi|223537974|gb|EEF39587.1| kinase, putative [Ricinus communis]

 Score =  963 bits (2489), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/665 (72%), Positives = 552/665 (83%), Gaps = 25/665 (3%)

Query: 1   MPP-KKLLVFFSIFLLNFSF------VLSN-NMNFDFTSFNLRNITLLGDSYLRNGVIGL 52
           MPP +KLLVF  +F + FSF      VL+N N+ FDF+S  LRN+TLLGDS+LR+G +GL
Sbjct: 1   MPPSRKLLVFLFLFTI-FSFKDNPFLVLANKNVIFDFSSLTLRNLTLLGDSFLRHGAVGL 59

Query: 53  TRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPD 112
           TR++ VP+SSSG++IYN P+PFFD ETN TASF+++F+FSI NVNPSSFGDGL FF+S D
Sbjct: 60  TRDVTVPSSSSGTVIYNYPIPFFDSETNITASFSTKFTFSITNVNPSSFGDGLTFFLSQD 119

Query: 113 NQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADP 172
           NQ LGS GG LGLVNSSQLTKN FVAIEFDTRLD HFDDP+ENH+GLDIDS++S+KTA+P
Sbjct: 120 NQTLGSPGGFLGLVNSSQLTKNNFVAIEFDTRLDAHFDDPNENHVGLDIDSVDSVKTANP 179

Query: 173 ILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGF 232
           ILQ IDLKSGN ITAWIDYKND R+LKV++SY+NLKP  P+L V IDLSGYLK  MYVGF
Sbjct: 180 ILQDIDLKSGNSITAWIDYKNDFRVLKVYLSYTNLKPEKPVLTVGIDLSGYLKEVMYVGF 239

Query: 233 SASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVET-DFPTSNSTNKHHNKI 291
           S STEGSTELH+I+SWSF+TSGF P RPKL PHNVSDSSV+  T   P S S +KH+  +
Sbjct: 240 SGSTEGSTELHLIESWSFKTSGFLPPRPKL-PHNVSDSSVITTTPSIPISRSADKHNKGL 298

Query: 292 GLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFH 351
           GLGLGIAGPAFFCV L  FGY SIKKW+ ++    L+ +LV GPR++SY+EL  ATRGFH
Sbjct: 299 GLGLGIAGPAFFCVFLVAFGYFSIKKWQKIKMVNSLKTELVAGPRQYSYKELSLATRGFH 358

Query: 352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           S+RI+G+G+FG+VYKAYF S+G +AAVKRSKHSHEGK +FLAELSIIACLRHKNLVQL G
Sbjct: 359 SSRIIGKGSFGDVYKAYFVSTGDIAAVKRSKHSHEGKADFLAELSIIACLRHKNLVQLQG 418

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
           WC EK ELLLVYE MP GSLD+MLYQ+SE+G LLSW HR NI +GLASALTYLHQECEQQ
Sbjct: 419 WCVEKSELLLVYELMPYGSLDKMLYQESEHGTLLSWSHRKNIAIGLASALTYLHQECEQQ 478

Query: 472 VIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATE 518
           VIHRDIK SN+MLDANFNARL                 TLTAGTMGYLAPEYL YG ATE
Sbjct: 479 VIHRDIKTSNVMLDANFNARLGDFGLARLMDHDKSPVSTLTAGTMGYLAPEYLHYGKATE 538

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           +TDVFSYGVV+LE+ACG RPIERE +  +MVNLVDWVWGLY EG+IIEAADKRLNG F E
Sbjct: 539 RTDVFSYGVVMLELACGMRPIEREPQSQEMVNLVDWVWGLYGEGKIIEAADKRLNGEFEE 598

Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDI 637
           DEM+ LLL+GLSCANPDS  RP+MRRV QILN EAE +VVPK+KP LTFS  ++LTLEDI
Sbjct: 599 DEMRNLLLIGLSCANPDSMERPTMRRVLQILNGEAELVVVPKMKPTLTFSCGLTLTLEDI 658

Query: 638 VSEDE 642
           VSE E
Sbjct: 659 VSECE 663

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799284|emb|CAN76998.1| hypothetical protein VITISV_007763 [Vitis vinifera]

 Score =  959 bits (2479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/641 (70%), Positives = 540/641 (84%), Gaps = 17/641 (2%)

Query: 20   VLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
            V + N++FDF+SF LRN TLLGDSYLRNGVIGLTR LGVP+SSSG++I N P+ FFD E+
Sbjct: 1690 VSAQNVDFDFSSFTLRNFTLLGDSYLRNGVIGLTRNLGVPSSSSGTVICNAPIAFFDSES 1749

Query: 80   NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
            NTTASF++RFSFSI NVNPSS+GDGLAFF+SP+N+ LGS GG LGLVNSSQLTKN+FVA+
Sbjct: 1750 NTTASFSTRFSFSITNVNPSSYGDGLAFFLSPENETLGSPGGYLGLVNSSQLTKNRFVAV 1809

Query: 140  EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL-QGIDLKSGNVITAWIDYKNDLRML 198
            EFDTRLDPHF+DP++NH+GLDIDSL S+KTADP+L + IDLKSG  ITAWI+YKND   L
Sbjct: 1810 EFDTRLDPHFNDPNDNHVGLDIDSLNSMKTADPVLDENIDLKSGKSITAWIEYKNDQMKL 1869

Query: 199  KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPV 258
            KVF+S S  KP  P+L V+IDLS YLK   YVGFSASTEGSTELH+I++WSF+T G  P 
Sbjct: 1870 KVFLSSSRSKPERPVLIVDIDLSEYLKELKYVGFSASTEGSTELHLIENWSFKTFGLVPA 1929

Query: 259  RPKLH--PHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIK 316
             P+LH  PHNVSD++V++      S+S NK H ++GLG GIAGP FFC+VL+VFGY+S+K
Sbjct: 1930 PPRLHFPPHNVSDNTVMIPPPSAVSDSGNKGHKRLGLGFGIAGPVFFCIVLSVFGYVSMK 1989

Query: 317  KWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA 376
            KW+ MR     +AD++ GPREFSY+EL+ AT+GFHS+RI+G GAFG VYKA+F ++G+++
Sbjct: 1990 KWRGMRWEKSFKADILAGPREFSYKELKGATKGFHSSRIIGNGAFGTVYKAFFITTGTIS 2049

Query: 377  AVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLY 436
            AVKRSKHSHEGK+EFLAELSIIACLRHKNLVQL GWC EKG+LLLVYE+MPNGSLD+MLY
Sbjct: 2050 AVKRSKHSHEGKSEFLAELSIIACLRHKNLVQLQGWCVEKGDLLLVYEFMPNGSLDKMLY 2109

Query: 437  QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL---- 492
            Q+SE G LL W HR NI+VG+AS LTYLHQECEQQVIHRDIK SNIMLD NFNARL    
Sbjct: 2110 QESEEGTLLKWSHRYNIIVGMASVLTYLHQECEQQVIHRDIKTSNIMLDGNFNARLGDFG 2169

Query: 493  ---------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
                         TLTAGTMGYLAPEYLQYG ATEKTDVFSYGVV+LEVACGRRPIE++T
Sbjct: 2170 LARLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEKDT 2229

Query: 544  EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR 603
            +  KM+NLVDWVWGLY++G I+EAADKRLN  F E+EM++LLLVGLSCANPD + RPSMR
Sbjct: 2230 DSQKMMNLVDWVWGLYSQGNILEAADKRLNREFKEEEMRKLLLVGLSCANPDCNVRPSMR 2289

Query: 604  RVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDIVSEDEE 643
            RV QILN+EAEPL+VP++KP LTFS S+ L+++DIVS+ E+
Sbjct: 2290 RVLQILNDEAEPLLVPRMKPSLTFSLSLPLSIDDIVSDGED 2330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461937|ref|XP_002268825.1| PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Vitis vinifera]

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/641 (70%), Positives = 540/641 (84%), Gaps = 17/641 (2%)

Query: 20  VLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
           V + N++FDF+SF LRN TLLGDSYLRNGVIGLTR LGVP+SSSG++I N P+ FFD E+
Sbjct: 26  VSAQNVDFDFSSFTLRNFTLLGDSYLRNGVIGLTRNLGVPSSSSGTVICNAPIAFFDSES 85

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
           NTTASF++RFSFSI NVNPSS+GDGLAFF+SP+N+ LGS GG LGLVNSSQLTKN+FVA+
Sbjct: 86  NTTASFSTRFSFSITNVNPSSYGDGLAFFLSPENETLGSPGGYLGLVNSSQLTKNRFVAV 145

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL-QGIDLKSGNVITAWIDYKNDLRML 198
           EFDTRLDPHF+DP++NH+GLDIDSL S+KTADP+L + IDLKSG  ITAWI+YKND   L
Sbjct: 146 EFDTRLDPHFNDPNDNHVGLDIDSLNSMKTADPVLDENIDLKSGKSITAWIEYKNDQMKL 205

Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPV 258
           KVF+S S  KP  P+L V+IDLS YLK   YVGFSASTEGSTELH+I++WSF+T G  P 
Sbjct: 206 KVFLSSSRSKPERPVLIVDIDLSEYLKELKYVGFSASTEGSTELHLIENWSFKTFGLVPA 265

Query: 259 RPKLH--PHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIK 316
            P+LH  PHNVSD++V++      S+S NK H ++GLG GIAGP FFC+VL+VFGY+S+K
Sbjct: 266 PPRLHFPPHNVSDNTVMIPPPSAVSDSGNKGHKRLGLGFGIAGPVFFCIVLSVFGYVSMK 325

Query: 317 KWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA 376
           KW+ MR     +AD++ GPREFSY+EL+ AT+GFHS+RI+G GAFG VYKA+F ++G+++
Sbjct: 326 KWRGMRWEKSFKADILAGPREFSYKELKGATKGFHSSRIIGNGAFGTVYKAFFITTGTIS 385

Query: 377 AVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLY 436
           AVKRSKHSHEGK+EFLAELSIIACLRHKNLVQL GWC EKG+LLLVYE+MPNGSLD+MLY
Sbjct: 386 AVKRSKHSHEGKSEFLAELSIIACLRHKNLVQLQGWCVEKGDLLLVYEFMPNGSLDKMLY 445

Query: 437 QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL---- 492
           Q+SE G LL W HR NI+VG+AS LTYLHQECEQQVIHRDIK SNIMLD NFNARL    
Sbjct: 446 QESEEGTLLKWSHRYNIIVGMASVLTYLHQECEQQVIHRDIKTSNIMLDGNFNARLGDFG 505

Query: 493 ---------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
                        TLTAGTMGYLAPEYLQYG ATEKTDVFSYGVV+LEVACGRRPIE++T
Sbjct: 506 LARLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEKDT 565

Query: 544 EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR 603
           +  KM+NLVDWVWGLY++G I+EAADKRLN  F E+EM++LLLVGLSCANPD + RPSMR
Sbjct: 566 DSQKMMNLVDWVWGLYSQGNILEAADKRLNREFKEEEMRKLLLVGLSCANPDCNVRPSMR 625

Query: 604 RVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDIVSEDEE 643
           RV QILN+EAEPL+VP++KP LTFS S+ L+++DIVS+ E+
Sbjct: 626 RVLQILNDEAEPLLVPRMKPSLTFSLSLPLSIDDIVSDGED 666

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114497|ref|XP_002316778.1| predicted protein [Populus trichocarpa] gi|222859843|gb|EEE97390.1| predicted protein [Populus trichocarpa]

 Score =  946 bits (2446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/661 (70%), Positives = 544/661 (82%), Gaps = 23/661 (3%)

Query: 1   MPPKK------LLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTR 54
           M P+K      L + F++ +       S+N++F+F SFNLRN+TLLGDSYLRNGVIGLTR
Sbjct: 1   MSPRKIQFCIFLFILFNLKVSPLVLASSSNVSFEFPSFNLRNLTLLGDSYLRNGVIGLTR 60

Query: 55  ELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQ 114
           ++ VP+SSSG+++YNNPVPFFDQE+NTTASF++RFSFSI  VN +S+GDGL+FF+S DNQ
Sbjct: 61  DVTVPSSSSGTVVYNNPVPFFDQESNTTASFSTRFSFSILGVNENSYGDGLSFFLSQDNQ 120

Query: 115 ILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL 174
            LGS GG LGLVNSSQLTKNKFVAIEFDTRLD HF+DP+++H+GLDIDSL SIKTADPIL
Sbjct: 121 TLGSPGGYLGLVNSSQLTKNKFVAIEFDTRLDAHFNDPNDHHVGLDIDSLNSIKTADPIL 180

Query: 175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSA 234
           Q IDLKSG++IT+WIDYKNDLR+LKV+MSYS+LKP  P+L V+IDLS YLK +MYVGFS 
Sbjct: 181 QDIDLKSGDLITSWIDYKNDLRVLKVYMSYSSLKPGNPILTVDIDLSEYLKRDMYVGFSG 240

Query: 235 STEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETD-FPTSNSTNKHHNKIGL 293
           STEGSTE H+I +WSF+TS F PV P  + HNVSDSSV V T   P SN+ NK H ++GL
Sbjct: 241 STEGSTERHLIANWSFRTSWFLPVNPNSNRHNVSDSSVTVTTPVIPISNAANKRHKRLGL 300

Query: 294 GLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSN 353
           GLGIAGPAFFC  L  FGY S++KW+ ++    L+A+LV GP+EFSY+EL+ ATRGFHS+
Sbjct: 301 GLGIAGPAFFCAFLVAFGYFSVRKWQKIKRVKSLKAELVTGPKEFSYKELKLATRGFHSS 360

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           RI+GRGAFGNVYKA F SSG++AAVKRSKHSHEGKTEFLAELSIIACLRHKNL+ LLGWC
Sbjct: 361 RIIGRGAFGNVYKALFNSSGTLAAVKRSKHSHEGKTEFLAELSIIACLRHKNLIPLLGWC 420

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQD-SENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            EKGE+LLVYE+MP GSLDRMLY++ SE G+ L+W HR  I VGLAS+LTYLH ECEQQV
Sbjct: 421 VEKGEVLLVYEFMPYGSLDRMLYEEGSELGIFLNWAHRQKIAVGLASSLTYLHHECEQQV 480

Query: 473 IHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           IHRDIK SNIMLD N NARL               + TLTAGTMGYLAPEYL YG ATEK
Sbjct: 481 IHRDIKTSNIMLDGNLNARLGDFGLARLMEHDKSPASTLTAGTMGYLAPEYLHYGKATEK 540

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
           TDVFSYGVV+LE+ CG+RPIERE    KMVNLVDWVWGLY EG IIEAAD RLNG F E+
Sbjct: 541 TDVFSYGVVILELVCGKRPIEREPVSQKMVNLVDWVWGLYGEGNIIEAADPRLNGEF-EE 599

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDIV 638
           EM++LLLVGLSCANPDS+ RP+MRRV QILN EAEP+ VP+ KP LTFS  ++LTLEDI 
Sbjct: 600 EMRKLLLVGLSCANPDSTGRPTMRRVLQILNGEAEPIAVPRKKPSLTFSCGLALTLEDIF 659

Query: 639 S 639
           S
Sbjct: 660 S 660

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089928|emb|CBI39747.3| unnamed protein product [Vitis vinifera]

 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/636 (70%), Positives = 536/636 (84%), Gaps = 17/636 (2%)

Query: 20  VLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
           V + N++FDF+SF LRN TLLGDSYLRNGVIGLTR LGVP+SSSG++I N P+ FFD E+
Sbjct: 24  VSAQNVDFDFSSFTLRNFTLLGDSYLRNGVIGLTRNLGVPSSSSGTVICNAPIAFFDSES 83

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
           NTTASF++RFSFSI NVNPSS+GDGLAFF+SP+N+ LGS GG LGLVNSSQLTKN+FVA+
Sbjct: 84  NTTASFSTRFSFSITNVNPSSYGDGLAFFLSPENETLGSPGGYLGLVNSSQLTKNRFVAV 143

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL-QGIDLKSGNVITAWIDYKNDLRML 198
           EFDTRLDPHF+DP++NH+GLDIDSL S+KTADP+L + IDLKSG  ITAWI+YKND   L
Sbjct: 144 EFDTRLDPHFNDPNDNHVGLDIDSLNSMKTADPVLDENIDLKSGKSITAWIEYKNDQMKL 203

Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPV 258
           KVF+S S  KP  P+L V+IDLS YLK   YVGFSASTEGSTELH+I++WSF+T G  P 
Sbjct: 204 KVFLSSSRSKPERPVLIVDIDLSEYLKELKYVGFSASTEGSTELHLIENWSFKTFGLVPA 263

Query: 259 RPKLH--PHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVFGYISIK 316
            P+LH  PHNVSD++V++      S+S NK H ++GLG GIAGP FFC+VL+VFGY+S+K
Sbjct: 264 PPRLHFPPHNVSDNTVMIPPPSAVSDSGNKGHKRLGLGFGIAGPVFFCIVLSVFGYVSMK 323

Query: 317 KWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA 376
           KW+ MR     +AD++ GPREFSY+EL+ AT+GFHS+RI+G GAFG VYKA+F ++G+++
Sbjct: 324 KWRGMRWEKSFKADILAGPREFSYKELKGATKGFHSSRIIGNGAFGTVYKAFFITTGTIS 383

Query: 377 AVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLY 436
           AVKRSKHSHEGK+EFLAELSIIACLRHKNLVQL GWC EKG+LLLVYE+MPNGSLD+MLY
Sbjct: 384 AVKRSKHSHEGKSEFLAELSIIACLRHKNLVQLQGWCVEKGDLLLVYEFMPNGSLDKMLY 443

Query: 437 QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL---- 492
           Q+SE G LL W HR NI+VG+AS LTYLHQECEQQVIHRDIK SNIMLD NFNARL    
Sbjct: 444 QESEEGTLLKWSHRYNIIVGMASVLTYLHQECEQQVIHRDIKTSNIMLDGNFNARLGDFG 503

Query: 493 ---------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
                        TLTAGTMGYLAPEYLQYG ATEKTDVFSYGVV+LEVACGRRPIE++T
Sbjct: 504 LARLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEKDT 563

Query: 544 EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR 603
           +  KM+NLVDWVWGLY++G I+EAADKRLN  F E+EM++LLLVGLSCANPD + RPSMR
Sbjct: 564 DSQKMMNLVDWVWGLYSQGNILEAADKRLNREFKEEEMRKLLLVGLSCANPDCNVRPSMR 623

Query: 604 RVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDIV 638
           RV QILN+EAEPL+VP++KP LTFS S+ L+++DI+
Sbjct: 624 RVLQILNDEAEPLLVPRMKPSLTFSLSLPLSIDDIL 659

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056469|ref|XP_002298872.1| predicted protein [Populus trichocarpa] gi|222846130|gb|EEE83677.1| predicted protein [Populus trichocarpa]

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/662 (69%), Positives = 535/662 (80%), Gaps = 22/662 (3%)

Query: 1   MPPKK------LLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTR 54
           M P+K      L V FS     F    + N++ +F SFNLRN+TLLGDSYLRNGVIGLTR
Sbjct: 1   MSPRKIHFCIFLFVLFSFKDPPFVLASTRNVSLEFPSFNLRNLTLLGDSYLRNGVIGLTR 60

Query: 55  ELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQ 114
           ++ VP+SSSG++IYNNP+ FFDQE+NTTASF++RFSFSI + N +SFGDGL+FF+S DNQ
Sbjct: 61  DVTVPSSSSGTVIYNNPISFFDQESNTTASFSTRFSFSIRSANENSFGDGLSFFLSQDNQ 120

Query: 115 ILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL 174
            LGS GG LGLVNSSQLTKNKFVAIEFDTRLD HF+DP+++HIGLDI SL SIKTADPIL
Sbjct: 121 TLGSPGGYLGLVNSSQLTKNKFVAIEFDTRLDAHFNDPNDHHIGLDIGSLNSIKTADPIL 180

Query: 175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSA 234
           Q IDLKSG++ITAWIDYKNDLR+LKV+MSYS+LKP+  LL V+IDLS YLKG+MYVGFS 
Sbjct: 181 QDIDLKSGDLITAWIDYKNDLRVLKVYMSYSSLKPINSLLTVHIDLSEYLKGDMYVGFSG 240

Query: 235 STEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETD-FPTSNSTNKHHNKIGL 293
           STEGSTELH++ +WSF+ SGF P+ P   P+NVSDSSV V T   P SN+ NK H  +G 
Sbjct: 241 STEGSTELHLVTNWSFRISGFLPLSPNSDPYNVSDSSVTVTTPVIPISNAANKRHKSLGF 300

Query: 294 GLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSN 353
           GLGI GPA FC  L  FGYIS +KW+ +     L+A+L+ GP+EFSY+EL+ ATRGF S+
Sbjct: 301 GLGITGPAIFCTFLVAFGYISFRKWQKIERVKSLKAELMTGPKEFSYKELKLATRGFQSS 360

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           RI+GRGAFGNVYKA+F SSG++AAVKRSKHSHEGKTEFLAELSIIACLRHKNL+ L GWC
Sbjct: 361 RIIGRGAFGNVYKAFFKSSGTIAAVKRSKHSHEGKTEFLAELSIIACLRHKNLIPLQGWC 420

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQD-SENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            EKGE+LLVYE+MP GSLDRMLY++ SE  + L+W HR    VGLAS+LTYLH ECEQ+V
Sbjct: 421 VEKGEVLLVYEFMPYGSLDRMLYEEGSEREIFLNWAHRQKTAVGLASSLTYLHHECEQKV 480

Query: 473 IHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           IHRDIK SNIMLD NFNARL                 TLTAGTMGYLAPEYL  G ATEK
Sbjct: 481 IHRDIKTSNIMLDGNFNARLGDFGLARIMEHDKSPVSTLTAGTMGYLAPEYLHCGKATEK 540

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
           TDVFSYGVV+LE+ACG+RPIE+E  G KMVNLVDWVWGLY EG+IIEAAD RLNG F E+
Sbjct: 541 TDVFSYGVVILELACGKRPIEKEPVGQKMVNLVDWVWGLYGEGKIIEAADSRLNGEFEEE 600

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLEDIV 638
           EM++LLLVGLSCANPD + RP+MRRV QILN EAEP+ VP+ KP LTFS  ++ TLE+IV
Sbjct: 601 EMRKLLLVGLSCANPDDTGRPTMRRVLQILNGEAEPIAVPRKKPSLTFSCGLAFTLENIV 660

Query: 639 SE 640
           S+
Sbjct: 661 SD 662

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461104|ref|XP_004148283.1| PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Cucumis sativus] gi|449524569|ref|XP_004169294.1| PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Cucumis sativus]

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/650 (68%), Positives = 534/650 (82%), Gaps = 15/650 (2%)

Query: 1   MPPKKLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPA 60
           M PK +L   ++FLL F+   +  + FDFTSFN+RN+TLLGDS+LR+GVIGLT+ELGVP+
Sbjct: 1   MTPKIILPL-TLFLLIFTTPRTECIGFDFTSFNIRNLTLLGDSHLRDGVIGLTKELGVPS 59

Query: 61  SSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAG 120
           SS+G++IYN P+ F+D + N TASF++RFSFSI N+NP+S GDGL+FF+SPDNQ LGS G
Sbjct: 60  SSAGTVIYNKPIGFYDADANFTASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPG 119

Query: 121 GCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLK 180
           G LGLVNSSQLTKNKF+A+EFDTRLD  F DP+ +H+G DI+SL SIKTA+P  QG++LK
Sbjct: 120 GYLGLVNSSQLTKNKFLAVEFDTRLDSVFKDPNAHHVGFDIESLISIKTANPASQGVNLK 179

Query: 181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST 240
           SG  ITAWI+YKN+   L+VF+S S+LKP   LL V IDLS YLK  M+VGFS STEGST
Sbjct: 180 SGKSITAWIEYKNEECRLRVFLSNSSLKPSKALLDVGIDLSSYLKEVMFVGFSGSTEGST 239

Query: 241 ELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGP 300
           ELH+I++W+F TSGF   RP+ +PHNVSDSSV+V  +   S+S N  H+++GLGLGIAGP
Sbjct: 240 ELHLIENWTFNTSGFVSARPRFNPHNVSDSSVIVSPNISLSDSGNGRHSRLGLGLGIAGP 299

Query: 301 AFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGA 360
           AFFC V+AVFG+ S+ KW+ +RT   ++A+L+ GPREFSY+EL++AT+GFHS+RI+G GA
Sbjct: 300 AFFCAVIAVFGFFSLMKWRRIRTQKSIKAELLTGPREFSYKELKTATKGFHSSRIIGNGA 359

Query: 361 FGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL 420
           FG VYKA+  SSG+++AVKRSKHSHEGKTEFLAELSIIA LRHKNLVQL GWC EKGELL
Sbjct: 360 FGTVYKAFCISSGNISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELL 419

Query: 421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKAS 480
           LVY++MPNGSLD++LYQ+S    LL+W HR NI VGLAS LTYLHQECEQQVIHRDIK  
Sbjct: 420 LVYDFMPNGSLDKLLYQESSEASLLNWSHRYNIAVGLASVLTYLHQECEQQVIHRDIKTG 479

Query: 481 NIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGV 527
           N++LD NFNARL                 TLTAGTMGYLAPEYLQYG ATEKTDVFSYGV
Sbjct: 480 NVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGV 539

Query: 528 VVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLV 587
           V+LEVACGRRPIERE    KMVNLVDWVWGL+++G+IIEAAD RLNG F EDEMK+LLLV
Sbjct: 540 VILEVACGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADSRLNGEFKEDEMKKLLLV 599

Query: 588 GLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFS-SVSLTLED 636
           GLSCANPDSS RPSMR+V QILNNEAEP +VPK+KP LTFS   SLT++D
Sbjct: 600 GLSCANPDSSTRPSMRKVLQILNNEAEPALVPKMKPSLTFSCGFSLTVDD 649

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241048|ref|NP_200394.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] gi|75333861|sp|Q9FHG4.1|LRKS7_ARATH RecName: Full=Probable L-type lectin-domain containing receptor kinase S.7; Short=LecRK-S.7; Flags: Precursor gi|10176937|dbj|BAB10136.1| serine/threonine-specific kinase like protein [Arabidopsis thaliana] gi|332009302|gb|AED96685.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana]

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/671 (65%), Positives = 532/671 (79%), Gaps = 30/671 (4%)

Query: 4   KKLLVFFSIFLLNFS-----FVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV 58
           +KLLV F  ++   S     FV S+NMNF F SF +RN+T LGDS+LRNGV+GLTRELGV
Sbjct: 5   RKLLVIFFTWITALSMSKPIFVSSDNMNFTFKSFTIRNLTFLGDSHLRNGVVGLTRELGV 64

Query: 59  PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP--SSFGDGLAFFISPDNQIL 116
           P +SSG++IYNNP+ F+D ++NTTASF++ FSF++ N+NP  +S GDGLAFF+S DN  L
Sbjct: 65  PDTSSGTVIYNNPIRFYDPDSNTTASFSTHFSFTVQNLNPDPTSAGDGLAFFLSHDNDTL 124

Query: 117 GSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG 176
           GS GG LGLVNSSQ  KN+FVAIEFDT+LDPHF+DP+ NHIGLD+DSL SI T+DP+L  
Sbjct: 125 GSPGGYLGLVNSSQPMKNRFVAIEFDTKLDPHFNDPNGNHIGLDVDSLNSISTSDPLLSS 184

Query: 177 -IDLKSGNVITAWIDYKNDLRMLKVFMSYSN-----LKPVTPLLKVNIDLSGYLKGNMYV 230
            IDLKSG  IT+WIDYKNDLR+L VF+SY++      KP  PLL VNIDLS +L G MYV
Sbjct: 185 QIDLKSGKSITSWIDYKNDLRLLNVFLSYTDPVTTTKKPEKPLLSVNIDLSPFLNGEMYV 244

Query: 231 GFSASTEGSTELHMIQSWSFQTSGFRPVRPKL-HPHNVSDSSVVVETDFPTSNSTNKHHN 289
           GFS STEGSTE+H+I++WSF+TSGF PVR K  H HNVSDSSVV +      +   +H +
Sbjct: 245 GFSGSTEGSTEIHLIENWSFKTSGFLPVRSKSNHLHNVSDSSVVNDDPVVIPSKKRRHRH 304

Query: 290 KIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRG 349
            + +GLGI+ P   C+ L VFGY ++KKWK+++    L+ +L+ G REFSY+EL +AT+G
Sbjct: 305 NLAIGLGISCPVLICLALFVFGYFTLKKWKSVKAEKELKTELITGLREFSYKELYTATKG 364

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQ 408
           FHS+R++GRGAFGNVY+A F SSG+++AVKRS+H S EGKTEFLAELSIIACLRHKNLVQ
Sbjct: 365 FHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLAELSIIACLRHKNLVQ 424

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLHQE 467
           L GWC EKGELLLVYE+MPNGSLD++LYQ+S+ G V L W HRLNI +GLASAL+YLH E
Sbjct: 425 LQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLNIAIGLASALSYLHHE 484

Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYG 514
           CEQQV+HRDIK SNIMLD NFNARL                 TLTAGTMGYLAPEYLQYG
Sbjct: 485 CEQQVVHRDIKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTLTAGTMGYLAPEYLQYG 544

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
           TATEKTD FSYGVV+LEVACGRRPI++E E  K VNLVDWVW L++EGR++EA D+RL G
Sbjct: 545 TATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWVWRLHSEGRVLEAVDERLKG 604

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTL 634
            F+E+ MK+LLLVGL CA+PDS+ RPSMRRV QILNNE EP  VPK+KP L+F S  L+L
Sbjct: 605 EFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNEIEPSPVPKMKPTLSF-SCGLSL 663

Query: 635 EDIVSEDEESD 645
           +DIVSEDEE D
Sbjct: 664 DDIVSEDEEGD 674

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297793053|ref|XP_002864411.1| hypothetical protein ARALYDRAFT_495664 [Arabidopsis lyrata subsp. lyrata] gi|297310246|gb|EFH40670.1| hypothetical protein ARALYDRAFT_495664 [Arabidopsis lyrata subsp. lyrata]

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/673 (65%), Positives = 530/673 (78%), Gaps = 35/673 (5%)

Query: 4   KKLLVFFSIFLLNFS-----FVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV 58
           +KLLV F  ++   S     FV S+N+NF F SF +RN+T LGDS+LRNGV+GLTRELGV
Sbjct: 5   RKLLVLFFTWITALSMAKPIFVSSDNVNFTFKSFTIRNLTFLGDSHLRNGVVGLTRELGV 64

Query: 59  PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP--SSFGDGLAFFISPDNQIL 116
           P +SSG++IYN P+ F+D ++NTTASF++ FSFS+ N+NP  +S GDGLAFF+S DN  L
Sbjct: 65  PDTSSGTVIYNTPIRFYDPDSNTTASFSTHFSFSVQNLNPDPTSAGDGLAFFLSHDNDTL 124

Query: 117 GSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG 176
           GS GG LGLVNSSQ  KN+FVAIEFDT+LDPHF+DP  NH+GLD+DSL SI T+DP    
Sbjct: 125 GSPGGYLGLVNSSQPMKNRFVAIEFDTKLDPHFNDPSGNHVGLDVDSLNSIATSDPSNSS 184

Query: 177 -IDLKSGNVITAWIDYKNDLRMLKVFMSYSN-----LKPVTPLLKVNIDLSGYLKGNMYV 230
            IDLKSG  IT+WIDYKNDLR+L VF+SY++      KP  PLL V IDLS +L G MYV
Sbjct: 185 QIDLKSGKSITSWIDYKNDLRLLNVFLSYTDPIAITKKPEKPLLSVKIDLSPFLNGEMYV 244

Query: 231 GFSASTEGSTELHMIQSWSFQTSGFRPVRPKL-HPHNVSDSSVVVETDFPTS--NSTNKH 287
           GFS STEGSTE+H+I++WSF+TSGF PVR K  H HNVSDSSV    D P +  +   KH
Sbjct: 245 GFSGSTEGSTEIHLIENWSFKTSGFLPVRSKSNHLHNVSDSSV---NDDPVAIPSKKRKH 301

Query: 288 HNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSAT 347
            + + +GLGI+ P FFC+ L VFGY ++KKWK+++    L+ +L+ G REFSY+EL +AT
Sbjct: 302 RHNLAIGLGISCPVFFCLALLVFGYFTLKKWKSVKAEKELKTELITGLREFSYKELYTAT 361

Query: 348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNL 406
           +GFHS+R++GRGAFGNVY+A F SSG+++AVKRS+H S EGKTEFLAELSIIACLRHKNL
Sbjct: 362 KGFHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLAELSIIACLRHKNL 421

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLH 465
           VQL GWC EKGELLLVYE+MPNGSLD++LYQ+SE G V L W HRLNI +GLASAL+YLH
Sbjct: 422 VQLQGWCNEKGELLLVYEFMPNGSLDKILYQESETGAVALDWSHRLNIAIGLASALSYLH 481

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQ 512
            ECEQQV+HRD+K SNIMLD NFNARL                 TLTAGTMGYLAPEYLQ
Sbjct: 482 HECEQQVVHRDVKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTLTAGTMGYLAPEYLQ 541

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
           YGTATEKTD FSYGVV+LEVACGRRPI++E E  K VNLVDWVW L++EGR++EA D+RL
Sbjct: 542 YGTATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWVWRLHSEGRVLEAVDERL 601

Query: 573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSL 632
            G F+E+ MK+LLLVGL CA+PDS+ RPSMRRV QILNNE EP  VPK+KP L+F S  L
Sbjct: 602 KGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNEVEPSPVPKMKPTLSF-SCGL 660

Query: 633 TLEDIVSEDEESD 645
           +L+DIVSEDEE D
Sbjct: 661 SLDDIVSEDEEGD 673

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553507|ref|XP_003545097.1| PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max]

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/650 (60%), Positives = 478/650 (73%), Gaps = 54/650 (8%)

Query: 21  LSNNMNFDFTSFNLRNITLLGDSYLRN-GVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
           +++N++FDF SF L NITLLGDS LRN GV+ LT     P SS+G+++Y+ PV  F    
Sbjct: 29  VADNVSFDFPSFTLNNITLLGDSSLRNNGVVRLTN--AAPTSSTGAVVYSQPVSLFH--- 83

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
              ASF++ FSFSI+N+NP+S GDGLAFF+SP+  +  S  G LGL      T   FVAI
Sbjct: 84  ---ASFSTTFSFSIHNLNPTSSGDGLAFFLSPNTTL--SLSGPLGLP-----TATGFVAI 133

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDTRLD  FDDP+ENH+G D+DS++S+ T DPIL GIDLKSGN I AWIDY     +L 
Sbjct: 134 EFDTRLDARFDDPNENHVGFDVDSMKSLVTGDPILDGIDLKSGNTIAAWIDYNTQYTLLN 193

Query: 200 VFMSYS-NLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFRPV 258
           VF+SYS + KP+ PLL V  DLS +L+  +YVGFSAST+GS ELH I++W+F +   + +
Sbjct: 194 VFLSYSRSSKPLLPLLSVKFDLSHHLRDPVYVGFSASTQGSIELHHIKNWTFHS---KTI 250

Query: 259 RPKLH-PHNVSDSSVVVETDFPTSNSTNKHHNKIGLGLGIAGPAFFCVVLAVF-GYISIK 316
              LH PHNVS   +        S +T K   ++ +G+ +AG   F V   +F GY+ ++
Sbjct: 251 TTTLHHPHNVSVVGI------SRSGATKKRDKRV-VGI-VAGSVSFFVAFTIFLGYVFVR 302

Query: 317 KWK-----NMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFAS 371
           +WK             ++  V  PREF Y+EL+SATR FH +RI+G G+FG VYKA+F S
Sbjct: 303 RWKIGGRKEREKDKFQKSGFVAYPREFHYKELKSATREFHPSRIVGHGSFGTVYKAFFIS 362

Query: 372 SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL 431
           SG++AAVKRS+HSHEGKTEFLAEL+ IA LRHKNLVQL GWC EKGELLLVY++MPNGSL
Sbjct: 363 SGTIAAVKRSRHSHEGKTEFLAELNTIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSL 422

Query: 432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR 491
           D+MLY++ E G LLSW HR NI +GLAS L YLHQECEQ+VIHRDIKA NI+LD NFN R
Sbjct: 423 DKMLYKEPERGKLLSWSHRQNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNFNPR 482

Query: 492 L-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L                 TLTAGTMGYLAPEYLQYG AT+KTDVFSYGVVVLEVACGRRP
Sbjct: 483 LGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGRRP 542

Query: 539 IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA 598
           IER  EG KM+NL+DWVWGL++EG++IEAADKRLNG F E+EM++LL++GLSCANPDS+ 
Sbjct: 543 IER--EGSKMLNLIDWVWGLHSEGKVIEAADKRLNGEFEEEEMRKLLILGLSCANPDSAE 600

Query: 599 RPSMRRVFQILNNEAEPLVVPKLKPCLTFSS---VSLTLEDIVSE-DEES 644
           RPSMRRV QILNNEA PL VPK+KP LTFSS   + LT+EDIVSE D+ES
Sbjct: 601 RPSMRRVLQILNNEAAPLAVPKVKPTLTFSSDLPLPLTIEDIVSEADQES 650

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	645
TAIR|locus:2162212	681	AT5G55830 [Arabidopsis thalian	0.758	0.718	0.636	1.3e-169
TAIR|locus:2143528	711	AT5G03140 [Arabidopsis thalian	0.947	0.859	0.470	1.6e-143
TAIR|locus:2083986	715	AT3G53380 [Arabidopsis thalian	0.534	0.482	0.444	2.3e-129
TAIR|locus:2099941	684	AT3G55550 [Arabidopsis thalian	0.920	0.868	0.381	3.7e-96
TAIR|locus:2133229	674	LPK1 "lectin-like protein kina	0.933	0.893	0.370	2e-95
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.468	0.447	0.450	1.6e-92
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.937	0.893	0.356	9.6e-89
TAIR|locus:2133239	669	AT4G02420 [Arabidopsis thalian	0.920	0.887	0.345	1.6e-88
TAIR|locus:2142499	651	AT5G10530 [Arabidopsis thalian	0.913	0.904	0.364	9.9e-87
TAIR|locus:2020608	666	AT1G70110 [Arabidopsis thalian	0.913	0.884	0.339	5.6e-84

TAIR|locus:2162212 AT5G55830 [Arabidopsis thaliana (taxid:3702)]

 Score = 1649 (585.5 bits), Expect = 1.3e-169, P = 1.3e-169
 Identities = 321/504 (63%), Positives = 393/504 (77%)

Query:     4 KKLLVFFS-IFLLNFS---FVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVP 59
             K L++FF+ I  L+ S   FV S+NMNF F SF +RN+T LGDS+LRNGV+GLTRELGVP
Sbjct:     6 KLLVIFFTWITALSMSKPIFVSSDNMNFTFKSFTIRNLTFLGDSHLRNGVVGLTRELGVP 65

Query:    60 ASSSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNP--SSFGDGLAFFISPDNQILG 117
              +SSG++IYNNP+ F+D +              + N+NP  +S GDGLAFF+S DN  LG
Sbjct:    66 DTSSGTVIYNNPIRFYDPDSNTTASFSTHFSFTVQNLNPDPTSAGDGLAFFLSHDNDTLG 125

Query:   118 SAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG- 176
             S GG LGLVNSSQ  KN+FVAIEFDT+LDPHF+DP+ NHIGLD+DSL SI T+DP+L   
Sbjct:   126 SPGGYLGLVNSSQPMKNRFVAIEFDTKLDPHFNDPNGNHIGLDVDSLNSISTSDPLLSSQ 185

Query:   177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSN-----LKPVTPLLKVNIDLSGYLKGNMYVG 231
             IDLKSG  IT+WIDYKNDLR+L VF+SY++      KP  PLL VNIDLS +L G MYVG
Sbjct:   186 IDLKSGKSITSWIDYKNDLRLLNVFLSYTDPVTTTKKPEKPLLSVNIDLSPFLNGEMYVG 245

Query:   232 FSASTEGSTELHMIQSWSFQTSGFRPVRPKL-HPHNVSDSSVVVETDFPTSNSTNKHHNK 290
             FS STEGSTE+H+I++WSF+TSGF PVR K  H HNVSDSSVV +      +   +H + 
Sbjct:   246 FSGSTEGSTEIHLIENWSFKTSGFLPVRSKSNHLHNVSDSSVVNDDPVVIPSKKRRHRHN 305

Query:   291 IGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGF 350
             + +GLGI+ P   C+ L VFGY ++KKWK+++    L+ +L+ G REFSY+EL +AT+GF
Sbjct:   306 LAIGLGISCPVLICLALFVFGYFTLKKWKSVKAEKELKTELITGLREFSYKELYTATKGF 365

Query:   351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQL 409
             HS+R++GRGAFGNVY+A F SSG+++AVKRS+H S EGKTEFLAELSIIACLRHKNLVQL
Sbjct:   366 HSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLAELSIIACLRHKNLVQL 425

Query:   410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLHQEC 468
              GWC EKGELLLVYE+MPNGSLD++LYQ+S+ G V L W HRLNI +GLASAL+YLH EC
Sbjct:   426 QGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLNIAIGLASALSYLHHEC 485

Query:   469 EQQVIHRDIKASNIMLDANFNARL 492
             EQQV+HRDIK SNIMLD NFNARL
Sbjct:   486 EQQVVHRDIKTSNIMLDINFNARL 509

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2143528 AT5G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
 Identities = 308/654 (47%), Positives = 404/654 (61%)

Query:    27 FDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXXXXXXX 86
             FD  +  L ++ LLGD++L NG I LTREL VP S++G  +Y  PV F   E        
Sbjct:    37 FDLGTLTLSSLKLLGDAHLNNGTIKLTRELSVPTSTAGKALYGKPVKFRHPETKSPASFT 96

Query:    87 XXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLD 146
                   + N+NPSS G GLAF ISPD   LGS GG LGL   +  + + FVA+EFDT +D
Sbjct:    97 TYFSFSVTNLNPSSIGGGLAFVISPDEDYLGSTGGFLGLTEETG-SGSGFVAVEFDTLMD 155

Query:   147 PHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSN 206
               F D + NH+GLD++++ S   AD     IDLKSGN + +WI Y    R+L V++SYSN
Sbjct:   156 VQFKDVNGNHVGLDLNAVVSAAVADLGNVDIDLKSGNAVNSWITYDGSGRVLTVYVSYSN 215

Query:   207 LKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF-----QTSGFRPVRPK 261
             LKP +P+L V +DL  Y+  +M+VGFS ST+GSTE+H +  WSF     ++S   P  P 
Sbjct:   216 LKPKSPILSVPLDLDRYVSDSMFVGFSGSTQGSTEIHSVDWWSFSSSFEESSESPPPMPN 275

Query:   262 LHPHNVSDSSVVV-------ETDFPTSNSTNKHHNKIGLGLG--IAGPAFFCVVLA-VFG 311
               P +   SS+         +T  P+S+  NK   K    +   +   AFF  + A V  
Sbjct:   276 SPPPSSPSSSITPSLSTVRRKTADPSSSCRNKLCKKSPAAVAGVVTAGAFFLALFAGVII 335

Query:   312 YISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFAS 371
             ++  KK K  R    L ++++  PREF+Y+EL+ AT  F S+R++G GAFG VYK     
Sbjct:   336 WVYSKKIKYTRKSESLASEIMKSPREFTYKELKLATDCFSSSRVIGNGAFGTVYKGILQD 395

Query:   372 SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL 431
             SG + A+KR  H  +G TEFL+ELS+I  LRH+NL++L G+C EKGE+LL+Y+ MPNGSL
Sbjct:   396 SGEIIAIKRCSHISQGNTEFLSELSLIGTLRHRNLLRLQGYCREKGEILLIYDLMPNGSL 455

Query:   432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR 491
             D+ LY   E+   L W HR  I++G+ASAL YLHQECE Q+IHRD+K SNIMLDANFN +
Sbjct:   456 DKALY---ESPTTLPWPHRRKILLGVASALAYLHQECENQIIHRDVKTSNIMLDANFNPK 512

Query:   492 L-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
             L                 T  AGTMGYLAPEYL  G ATEKTDVFSYG VVLEV  GRRP
Sbjct:   513 LGDFGLARQTEHDKSPDATAAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVCTGRRP 572

Query:   539 IER-ETE-GHK---MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCAN 593
             I R E E G +     +LVDWVWGLY EG+++ A D+RL+  FN +EM R+++VGL+C+ 
Sbjct:   573 ITRPEPEPGLRPGLRSSLVDWVWGLYREGKLLTAVDERLS-EFNPEEMSRVMMVGLACSQ 631

Query:   594 PDSSARPSMRRVFQILNNEAEPLVVPKLKPC--LTFSSVSLTLEDIVSEDEESD 645
             PD   RP+MR V QIL  EA+   VP  KP   ++FS+  L L     +D  SD
Sbjct:   632 PDPVTRPTMRSVVQILVGEADVPEVPIAKPSSSMSFSTSELLL---TLQDSVSD 682

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2083986 AT3G53380 [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
 Identities = 163/367 (44%), Positives = 234/367 (63%)

Query:   294 GLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSN 353
             G+  AG  F  +      ++  KK+K +       ++++  P+EFSY+EL++ T+ F+ +
Sbjct:   320 GVVTAGAFFLALFAGALFWVYSKKFKRVERSDSFASEIIKAPKEFSYKELKAGTKNFNES 379

Query:   354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNLVQLLGW 412
             RI+G GAFG VY+     +G + AVKR  HS + K  EFL+ELSII  LRH+NLV+L GW
Sbjct:   380 RIIGHGAFGVVYRGILPETGDIVAVKRCSHSSQDKKNEFLSELSIIGSLRHRNLVRLQGW 439

Query:   413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY-------LH 465
             C EKGE+LLVY+ MPNGSLD+ L++ S   +      ++ + V  A A  +       +H
Sbjct:   440 CHEKGEILLVYDLMPNGSLDKALFE-SRFTLPWDHRKKILLGVASALAYLHRECENQVIH 498

Query:   466 QECEQQVIHRDIKASNIML-DANFNARLESS----FTLTAGTMGYLAPEYLQYGTATEKT 520
             ++ +   I  D ++ N  L D     ++E       T+ AGTMGYLAPEYL  G A+EKT
Sbjct:   499 RDVKSSNIMLD-ESFNAKLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRASEKT 557

Query:   521 DVFSYGVVVLEVACGRRPIERE--TEGHKM---VNLVDWVWGLYAEGRIIEAADKRLNGA 575
             DVFSYG VVLEV  GRRPIE++   + H +    NLV+WVWGLY EG++  AAD RL G 
Sbjct:   558 DVFSYGAVVLEVVSGRRPIEKDLNVQRHNVGVNPNLVEWVWGLYKEGKVSAAADSRLEGK 617

Query:   576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSS--VSLT 633
             F+E EM R+L+VGL+C++PD + RP+MR V Q+L  EA+  VVPK +P ++FS+  + L+
Sbjct:   618 FDEGEMWRVLVVGLACSHPDPAFRPTMRSVVQMLIGEADVPVVPKSRPTMSFSTSHLLLS 677

Query:   634 LEDIVSE 640
             L+D +S+
Sbjct:   678 LQDTLSD 684

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 245/642 (38%), Positives = 338/642 (52%)

Query:     6 LLVFFSIFLLNFSFVLSNNMNFDFTSFNLR--NITLLGDSYLR-NGVIGLTRELGVPASS 62
             +++   IFL +   V S   +F F  F     N+TL G + +   G I LT E       
Sbjct:     7 VILLLLIFLTHL--VSSLIQDFSFIGFKKASPNLTLNGVAEIAPTGAIRLTTET---QRV 61

Query:    63 SGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGG- 121
              G   Y+ P+ F                  +     +  G GLAF I+P   + GS    
Sbjct:    62 IGHAFYSLPIRFKPIGVNRALSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQ 121

Query:   122 CLGLVNSSQLT-KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLES-IKT------ADPI 173
              LGL+NSS++   + F A+EFDT  D  F+D ++NH+G+DI+S+ES I T      A+  
Sbjct:   122 YLGLLNSSRVNFSSHFFAVEFDTVRDLEFEDINDNHVGIDINSMESSISTPAGYFLANST 181

Query:   174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFS 233
              + + L  G VI AWIDY ++ + L V +S  + KP   LL  ++DLS  L   MYVGFS
Sbjct:   182 KKELFLDGGRVIQAWIDYDSNKKRLDVKLSPFSEKPKLSLLSYDVDLSSVLGDEMYVGFS 241

Query:   234 ASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTS-NSTNKHHNKIG 292
             AST      H I  W+F  SG           ++S  S+      P+S     K    + 
Sbjct:   242 ASTGLLASSHYILGWNFNMSG--------EAFSLSLPSL---PRIPSSIKKRKKKRQSLI 290

Query:   293 LGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHS 352
             LG+ +        VL       ++K K+         D   GP  FSYREL+ AT GF  
Sbjct:   291 LGVSLLCSLLIFAVLVAASLFVVRKVKDEDRVEEWELDF--GPHRFSYRELKKATNGFGD 348

Query:   353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLG 411
               +LG G FG VYK     S    AVKR  H S +G  EF++E+S I  LRH+NLVQLLG
Sbjct:   349 KELLGSGGFGKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLVQLLG 408

Query:   412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             WC  + +LLLVY++MPNGSLD  L+ ++   V+L+W  R  I+ G+AS L YLH+  EQ 
Sbjct:   409 WCRRRDDLLLVYDFMPNGSLDMYLFDENPE-VILTWKQRFKIIKGVASGLLYLHEGWEQT 467

Query:   472 VIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATE 518
             VIHRDIKA+N++LD+  N R+             +   T   GT GYLAPE  + G  T 
Sbjct:   468 VIHRDIKAANVLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGKLTT 527

Query:   519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
              TDV+++G V+LEVACGRRPIE      ++V +VDWVW  +  G I +  D+RLNG F+E
Sbjct:   528 STDVYAFGAVLLEVACGRRPIETSALPEELV-MVDWVWSRWQSGDIRDVVDRRLNGEFDE 586

Query:   579 DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE-AEPLVVP 619
             +E+  ++ +GL C+N     RP+MR+V   L  +   P VVP
Sbjct:   587 EEVVMVIKLGLLCSNNSPEVRPTMRQVVMYLEKQFPSPEVVP 628

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 241/651 (37%), Positives = 351/651 (53%)

Query:     5 KLLVFFSIFLLNFSFVL---SNNMNFDFTSFNL--RNITLLGDSYLR-NGVIGLTRELGV 58
             KL   F  F++  S  L   S ++NF + SF+    NI++ G + +  NG++ LT +  +
Sbjct:     4 KLFTIFFFFIILLSKPLNSSSQSLNFTYNSFHRPPTNISIQGIATVTSNGILKLTDKTVI 63

Query:    59 PASSSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGS 118
                S+G   Y  P+ F D                I +  P+  G G+AFFI+P N +L S
Sbjct:    64 ---STGHAFYTEPIRFKDSPNDTVSSFSTTFVIGIYSGIPTISGHGMAFFIAP-NPVLSS 119

Query:   119 AGGC--LGLVNSSQLTK--NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA---- 170
             A     LGL +S+      N  +A+EFDT ++P FDD ++NH+G++I+SL S+K++    
Sbjct:   120 AMASQYLGLFSSTNNGNDTNHILAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGY 179

Query:   171 -DPILQ--GIDLKSGNVITAWIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKG 226
              D I Q   + L S   +  W+DY +    + V M+ +  +KP   L+ V  DLS     
Sbjct:   180 WDEINQFNNLTLISRKRMQVWVDYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQ 239

Query:   227 NMYVGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNK 286
             +MY+GFSA+T      H +  WSF   G     P L    V     V     PTS     
Sbjct:   240 DMYLGFSAATGYVLSEHFVFGWSFMVKG--KTAPPLTLSKVPKFPRVG----PTSLQ-RF 292

Query:   287 HHNKIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSA 346
             + N++ L   +  P  F V L       +++ +          +   G     +++L  A
Sbjct:   293 YKNRMPLFSLLLIPVLFVVSLIFLVRFIVRRRRKFAEEF-EDWETEFGKNRLRFKDLYYA 351

Query:   347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKN 405
             T+GF    +LG G FG VY+    ++    AVKR S  S +G  EF+AE+  I  + H+N
Sbjct:   352 TKGFKDKDLLGSGGFGRVYRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMSHRN 411

Query:   406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
             LV LLG+C  + ELLLVY+YMPNGSLD+ LY   E  V L W  R N+++G+AS L YLH
Sbjct:   412 LVPLLGYCRRRDELLLVYDYMPNGSLDKYLYDCPE--VTLDWKQRFNVIIGVASGLFYLH 469

Query:   466 QECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQ 512
             +E EQ VIHRDIKASN++LDA +N RL             +   T   GT GYLAP++++
Sbjct:   470 EEWEQVVIHRDIKASNVLLDAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVR 529

Query:   513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
              G AT  TDVF++GV++LEVACGRRPIE E E  + V LVD V+G + EG I++A D  L
Sbjct:   530 TGRATTATDVFAFGVLLLEVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNL 589

Query:   573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
                +++ E++ +L +GL C++ D   RP+MR+V Q L  +A    +P L P
Sbjct:   590 GSVYDQREVETVLKLGLLCSHSDPQVRPTMRQVLQYLRGDA---TLPDLSP 637

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 675 (242.7 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
 Identities = 145/322 (45%), Positives = 200/322 (62%)

Query:   334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFL 392
             G   F +++L  AT+GF    +LG G FG+VYK     +    AVKR  H S +G  EF+
Sbjct:   331 GKNRFRFKDLYYATKGFKEKGLLGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFV 390

Query:   393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
             AE+  I  + H+NLV LLG+C  +GELLLVY+YMPNGSLD+ LY   E  V L+W  R+ 
Sbjct:   391 AEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNTPE--VTLNWKQRIK 448

Query:   453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLT 499
             +++G+AS L YLH+E EQ VIHRD+KASN++LD   N RL             +   T  
Sbjct:   449 VILGVASGLFYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHV 508

Query:   500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY 559
              GT+GYLAPE+ + G AT  TDVF++G  +LEVACGRRPIE + E  +   LVDWV+GL+
Sbjct:   509 VGTLGYLAPEHTRTGRATMATDVFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLW 568

Query:   560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVP 619
              +G I+ A D  +    +E E++ +L +GL C++ D  ARPSMR+V   L  +A+   +P
Sbjct:   569 NKGDILAAKDPNMGSECDEKEVEMVLKLGLLCSHSDPRARPSMRQVLHYLRGDAK---LP 625

Query:   620 KLKPC-LTFSSVSLTLEDIVSE 640
             +L P  L+ S +   + D  SE
Sbjct:   626 ELSPLDLSGSGMMFGVHDGFSE 647

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 234/657 (35%), Positives = 340/657 (51%)

Query:     4 KKLLVFFSIFLLNFSFVLSNNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGVPA 60
             K  L+FF   L       S N+NF +  F+  L +I+L G + +  NG++ LT       
Sbjct:     4 KLKLIFFFFLLCQIMISSSQNLNFTYNGFHPPLTDISLQGLATVTPNGLLKLTN---TSV 60

Query:    61 SSSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQI-LGSA 119
               +G       + F D +              I++  P+  G G+AF ++P   +     
Sbjct:    61 QKTGHAFCTERIRFKDSQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLGLPFALP 120

Query:   120 GGCLGLVNSSQLTK--NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIK--TAD---- 171
                +GL N S      N   A+EFDT     F DP++NH+G+D++ L S    TA     
Sbjct:   121 SQYIGLFNISNNGNDTNHIFAVEFDTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYRDD 180

Query:   172 -PILQGIDLKSGNVITAWIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKGNMY 229
                 Q + L S   I  WIDY N    + V ++ + + KP  PL+    DLS  L  +MY
Sbjct:   181 HDKFQNLSLISRKRIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMY 240

Query:   230 VGFSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHN 289
             VGFS++T      H +  WSF+ +G  P+        +S S +     F     +  +  
Sbjct:   241 VGFSSATGSVLSEHFLVGWSFRLNGEAPM--------LSLSKLPKLPRFEPRRISEFY-- 290

Query:   290 KIGLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRG 349
             KIG+ L I+    F ++   F YI  +K K          +   G   F ++EL  AT+G
Sbjct:   291 KIGMPL-ISLSLIFSIIFLAF-YIVRRKKKYEEELDDWETEF--GKNRFRFKELYHATKG 346

Query:   350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQ 408
             F    +LG G FG VY+    ++    AVKR  H S +G  EF+AE+  I  + H+NLV 
Sbjct:   347 FKEKDLLGSGGFGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVP 406

Query:   409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
             LLG+C  +GELLLVY+YMPNGSLD+ LY + E    L W  R  I+ G+AS L YLH+E 
Sbjct:   407 LLGYCRRRGELLLVYDYMPNGSLDKYLYNNPET--TLDWKQRSTIIKGVASGLFYLHEEW 464

Query:   469 EQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGT 515
             EQ VIHRD+KASN++LDA+FN RL             +   T   GT+GYLAPE+ + G 
Sbjct:   465 EQVVIHRDVKASNVLLDADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGR 524

Query:   516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
             AT  TDV+++G  +LEV  GRRPIE  +       LV+WV+ L+  G I+EA D +L  +
Sbjct:   525 ATTTTDVYAFGAFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSS 584

Query:   576 -FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPC-LTFSSV 630
              ++ +E++ +L +GL C++ D  ARPSMR+V Q L  +   + +P+L P  L+  SV
Sbjct:   585 GYDLEEVEMVLKLGLLCSHSDPRARPSMRQVLQYLRGD---MALPELTPLDLSAGSV 638

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2133239 AT4G02420 [Arabidopsis thaliana (taxid:3702)]

 Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
 Identities = 223/646 (34%), Positives = 344/646 (53%)

Query:    10 FSIFLLNFSF--VLSNNMNFDFTSFNLR----NITLLGDSYLR-NGVIGLTRELGVPASS 62
             F+IF L+F +  + S++   DFT    R    +I++LG + +  NG++ LT        S
Sbjct:     7 FTIFFLSFFWQSLKSSSQIIDFTYNGFRPPPTDISILGIATITPNGLLKLTN---TTMQS 63

Query:    63 SGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQI-LGSAGG 121
             +G   Y  P+ F D                I++  P     G+AF I+P+ ++  GS   
Sbjct:    64 TGHAFYTKPIRFKDSPNGTVSSFSTTFVFAIHSQIP--IAHGMAFVIAPNPRLPFGSPLQ 121

Query:   122 CLGLVN--SSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA-------DP 172
              LGL N  ++   +N   A+E DT ++  F+D + NH+G+DI+SL S+K++       + 
Sbjct:   122 YLGLFNVTNNGNVRNHVFAVELDTIMNIEFNDTNNNHVGIDINSLNSVKSSPAGYWDEND 181

Query:   173 ILQGIDLKSGNVITAWIDYKNDLRMLKVFMS-YSNLKPVTPLLKVNIDLSGYLKGNMYVG 231
                 + L S   +  W+D+     ++ V M+ +  +KP  PL+ +  DLS  L  +M+VG
Sbjct:   182 QFHNLTLISSKRMQVWVDFDGPTHLIDVTMAPFGEVKPRKPLVSIVRDLSSVLLQDMFVG 241

Query:   232 FSASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKI 291
             FS++T        +  WSF  +G      +  P  +S    +   D   +     + N +
Sbjct:   242 FSSATGNIVSEIFVLGWSFGVNG------EAQPLALSKLPRLPVWDLKPTRVYRFYKNWV 295

Query:   292 GLGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFH 351
              L   +  P  F +++ +  +I  ++ K          +   G     +++L  AT+GF 
Sbjct:   296 PLISLLLIP--FLLIIFLVRFIMKRRRKFAEEVEDWETEF--GKNRLRFKDLYYATKGFK 351

Query:   352 SNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
                ILG G FG+VYK     +    AVKR S  S +G  EF+AE+  I  + H+NLV L+
Sbjct:   352 DKNILGSGGFGSVYKGIMPKTKKEIAVKRVSNESRQGLKEFVAEIVSIGQMSHRNLVPLV 411

Query:   411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
             G+C  + ELLLVY+YMPNGSLD+ LY   E  V L W  R  ++ G+ASAL YLH+E EQ
Sbjct:   412 GYCRRRDELLLVYDYMPNGSLDKYLYNSPE--VTLDWKQRFKVINGVASALFYLHEEWEQ 469

Query:   471 QVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTAT 517
              VIHRD+KASN++LDA  N RL             +   T   GT GYLAP++++ G AT
Sbjct:   470 VVIHRDVKASNVLLDAELNGRLGDFGLAQLCDHGSDPQTTRVVGTWGYLAPDHIRTGRAT 529

Query:   518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
               TDVF++GV++LEVACGRRPIE   +  + V LVDWV+  + E  I++A D  L   ++
Sbjct:   530 TTTDVFAFGVLLLEVACGRRPIEINNQSGERVVLVDWVFRFWMEANILDAKDPNLGSEYD 589

Query:   578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
             + E++ +L +GL C++ D  ARP+MR+V Q L  +A   ++P L P
Sbjct:   590 QKEVEMVLKLGLLCSHSDPLARPTMRQVLQYLRGDA---MLPDLSP 632

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 238/653 (36%), Positives = 346/653 (52%)

Query:     7 LVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSL 66
             ++ FS F+L   FV S   N      ++  I   GD+   NG + LT  +     + G  
Sbjct:     5 ILLFS-FVLVLPFVCSVQFNISRFGSDVSEIAYQGDARA-NGAVELTN-IDYTCRA-GWA 60

Query:    67 IYNNPVPFFDQEXXXXXXXXXXXXXXIN--NVNPSSFGDGLAFFISPDNQIL--GSAGGC 122
              Y   VP ++                I+  NV   ++G G AFF++P    L   SAGG 
Sbjct:    61 TYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGF 120

Query:   123 LGLVNSSQLTKNKF--VAIEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDL 179
             LGL N +    + F  V +EFDT  +P +D  D ++H+G++ +SL S           + 
Sbjct:   121 LGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQ 180

Query:   180 KSGNVITAWIDYKNDLRMLKVFMSYS-NLKPV-TPLLKVNIDLSGYLKGNMYVGFSASTE 237
               G V+   I Y +  R L V  +Y     P+    L   IDLS  L   + +GFSA++ 
Sbjct:   181 DIGRVL---IFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSG 237

Query:   238 GSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIGLGL-G 296
             G TE + + SW F +S        L   ++  S              +K    IG+ + G
Sbjct:   238 GVTEGNRLLSWEFSSS--------LELIDIKKSQ------------NDKKGMIIGISVSG 277

Query:   297 IAGPAFFCVVLAVFGYISIKKWKNMRTG--ICLRADLV--PGPREFSYRELRSATRGFHS 352
                  FF   L VF     +K K   T     +  DL    GPR+F+Y++L SA   F  
Sbjct:   278 FVLLTFFITSLIVFLKRKQQKKKAEETENLTSINEDLERGAGPRKFTYKDLASAANNFAD 337

Query:   353 NRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
             +R LG G FG VY+ Y  S   + A+K+ +  S +GK EF+ E+ II+ LRH+NLVQL+G
Sbjct:   338 DRKLGEGGFGAVYRGYLNSLDMMVAIKKFAGGSKQGKREFVTEVKIISSLRHRNLVQLIG 397

Query:   412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             WC EK E L++YE+MPNGSLD  L+    +   L+W+ R  I +GLASAL YLH+E EQ 
Sbjct:   398 WCHEKDEFLMIYEFMPNGSLDAHLFGKKPH---LAWHVRCKITLGLASALLYLHEEWEQC 454

Query:   472 VIHRDIKASNIMLDANFNARLESSFTLT--------------AGTMGYLAPEYLQYGTAT 517
             V+HRDIKASN+MLD+NFNA+L   F L               AGT GY+APEY+  G A+
Sbjct:   455 VVHRDIKASNVMLDSNFNAKL-GDFGLARLMDHELGPQTTGLAGTFGYMAPEYISTGRAS 513

Query:   518 EKTDVFSYGVVVLEVACGRRPIERETEGH--KMVNLVDWVWGLYAEGRIIEAADKRLN-G 574
             +++DV+S+GVV LE+  GR+ ++R  +G    + NLV+ +W LY +G +I A D++L  G
Sbjct:   514 KESDVYSFGVVTLEIVTGRKSVDRR-QGRVEPVTNLVEKMWDLYGKGEVITAIDEKLRIG 572

Query:   575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTF 627
              F+E + + L++VGL CA+PD + RPS+++  Q+LN EA    +P   P  T+
Sbjct:   573 GFDEKQAECLMIVGLWCAHPDVNTRPSIKQAIQVLNLEAPVPHLPTKMPVATY 625

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020608 AT1G70110 [Arabidopsis thaliana (taxid:3702)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 216/637 (33%), Positives = 335/637 (52%)

Query:     6 LLVFFSIFLLNFSFVLSNNMNFDFTSFNLR-NITLLGDSYLRN-GVIGLTRELGVPASSS 63
             LL+F  +F +  S V+    N +   FN   N+   G +Y+ N G+I LT     P  ++
Sbjct:     3 LLLFLVLFFVPES-VVCQRPNPNGVEFNTSGNMYTSGSAYINNNGLIRLTNS--TP-QTT 58

Query:    64 GSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGC- 122
             G + YN+ + F +                I   N    G G+AF I P   +  +     
Sbjct:    59 GQVFYNDQLRFKNSVNGTVSSFSTTFVFSIEFHNGIYGGYGIAFVICPTRDLSPTFPTTY 118

Query:   123 LGLVNSSQL--TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA-------DPI 173
             LGL N S +   KN  VA+E DT++D  F+D D NH+G+DI++L S   A       +  
Sbjct:   119 LGLFNRSNMGDPKNHIVAVELDTKVDQQFEDKDANHVGIDINTLVSDTVALAGYYMDNGT 178

Query:   174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNL-KPVTPLLKVNIDLSGYLKGNMYVGF 232
              + + L SG  +  WI+Y +  + + V +    + KP  PLL +  DLS YL   MYVGF
Sbjct:   179 FRSLLLNSGQPMQIWIEYDSKQKQINVTLHPLYVPKPKIPLLSLEKDLSPYLLELMYVGF 238

Query:   233 SASTEGSTELHMIQSWSFQTSGFRPVRPKLHPHNVSDSSVVVETDFPTSNSTNKHHNKIG 292
             +++T   T  H I  W+F+ +G     P + P  +     +   + P   S N     + 
Sbjct:   239 TSTTGDLTASHYILGWTFKMNG---TTPDIDPSRLPK---IPRYNQPWIQSPN---GILT 289

Query:   293 LGLGIAGPAFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSATRGFHS 352
             + L ++G     ++L++  ++ +K+ K +   +    ++  GP  F++++L  AT+GF  
Sbjct:   290 ISLTVSG-VIILIILSLSLWLFLKRKKLLE--VLEDWEVQFGPHRFAFKDLHIATKGFKD 346

Query:   353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLG 411
               +LG+G FG VYK     S    AVK   H S +G  EF+AE++ I  LRH NLV+L G
Sbjct:   347 TEVLGKGGFGKVYKGTLPVSNVEIAVKMVSHDSRQGMREFIAEIATIGRLRHPNLVRLQG 406

Query:   412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             +C  KGEL LVY+ M  GSLD+ LY        L W  R  I+  +AS L YLHQ+  Q 
Sbjct:   407 YCRHKGELYLVYDCMAKGSLDKFLYHQQTGN--LDWSQRFKIIKDVASGLYYLHQQWVQV 464

Query:   472 VIHRDIKASNIMLDANFNARLESSFTLT--------------AGTMGYLAPEYLQYGTAT 517
             +IHRDIK +NI+LDAN NA+L   F L               AGT+GY++PE  + G A+
Sbjct:   465 IIHRDIKPANILLDANMNAKL-GDFGLAKLCDHGTDPQTSHVAGTLGYISPELSRTGKAS 523

Query:   518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
              ++DVF++G+V+LE+ACGR+PI       +MV L DWV   +    I++  D ++   + 
Sbjct:   524 TRSDVFAFGIVMLEIACGRKPILPRASQREMV-LTDWVLECWENEDIMQVLDHKIGQEYV 582

Query:   578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE 614
             E++   +L +GL C++P ++ RP+M  V Q+L++ A+
Sbjct:   583 EEQAALVLKLGLFCSHPVAAIRPNMSSVIQLLDSVAQ 619

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FHG4	LRKS7_ARATH	2, ., 7, ., 1, 1, ., 1	0.6557	0.9937	0.9412	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	645
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	5e-85
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	3e-72
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-43
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-42
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-42
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-41
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-41
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-40
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-40
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-33
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-33
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-30
cd01951	223	cd01951, lectin_L-type, legume lectins	2e-27
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-27
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-26
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-25
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-25
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-25
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-24
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-24
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-23
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-23
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-23
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-23
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-23
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	8e-23
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-23
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-22
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-22
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-22
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-22
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-22
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-22
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-21
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-21
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-21
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-21
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-20
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-20
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-20
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-20
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-20
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-19
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-19
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-19
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-19
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-19
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-19
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-19
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	9e-19
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-18
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-18
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-18
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-18
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-18
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-18
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-18
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-18
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-17
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-17
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-17
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-17
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-17
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-17
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-17
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-17
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-17
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-17
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-17
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-17
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-16
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-16
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-16
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-15
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-15
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-15
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-15
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-15
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-15
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-15
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-15
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-15
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-15
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-15
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-15
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-15
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-15
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-15
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	7e-15
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-15
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-14
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-14
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-14
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-14
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-14
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-14
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-14
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-14
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	5e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-14
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-14
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-13
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-13
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-13
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-13
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-13
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-13
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-13
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-13
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-13
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-13
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-13
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-13
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	6e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-13
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-13
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	8e-13
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	9e-13
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	9e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-12
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-12
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-12
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-12
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-12
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-12
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-12
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-12
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-12
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-12
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-12
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-12
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-12
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	6e-12
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-12
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	7e-12
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-12
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	8e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-12
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-11
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-11
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-11
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-11
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-11
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-11
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-11
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-11
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-11
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-11
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	4e-11
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	6e-11
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	6e-11
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-11
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-10
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-10
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-10
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-10
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-10
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-10
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-10
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-10
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	5e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-10
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	8e-10
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	9e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-09
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-09
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-09
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-09
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-09
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-09
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-09
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-09
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-09
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-09
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-09
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-09
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-09
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-09
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-09
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	6e-09
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	6e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	7e-09
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	9e-09
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-08
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-08
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-08
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-08
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-08
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-08
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-08
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-08
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-08
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-08
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	7e-08
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-08
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	8e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd07308	218	cd07308, lectin_leg-like, legume-like lectins: ERG	1e-07
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-07
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-07
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-07
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-06
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	4e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-06
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	8e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	8e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-05
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	2e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-05
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-05
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	5e-05
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	6e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	7e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	9e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	2e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	3e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	3e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	5e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	9e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.002
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  266 bits (681), Expect = 5e-85
 Identities = 112/236 (47%), Positives = 148/236 (62%), Gaps = 8/236 (3%)

Query: 26  NFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTT 82
           +F+F  F+    N+TL GD+ +  NG + LT +   PASS G  +Y+ PV  +D  T   
Sbjct: 2   SFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTS-PASSVGRALYSKPVRLWDSTTGKV 60

Query: 83  ASFTSRFSFSINNVNPSSFGDGLAFFISP-DNQILGSAGGCLGLVNSS--QLTKNKFVAI 139
           ASF++ FSFSI   NPS  GDGLAFF++P D+    S+GG LGL NSS    + N  VA+
Sbjct: 61  ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAV 120

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDT  +P F DPD+NH+G+D++SL S+K       G  LKSG  + AWIDY +  + L 
Sbjct: 121 EFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDDDGGKLKSGKPMQAWIDYDSSSKRLS 180

Query: 200 VFMSYSNL-KPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSG 254
           V ++YS + KP  PLL   +DLS  L   +YVGFSAST   TELH I SWSF ++G
Sbjct: 181 VTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  232 bits (593), Expect = 3e-72
 Identities = 101/231 (43%), Positives = 145/231 (62%), Gaps = 10/231 (4%)

Query: 26  NFDFTSF-NLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTA 83
           +F++  F N+ N+TL GD + L NG++ LT    V  +S+G  +Y+ P+  +D  T   A
Sbjct: 4   SFNYNGFSNVSNLTLQGDATVLPNGLLQLTN---VTNNSAGRALYSKPIRLWDSSTGKVA 60

Query: 84  SFTSRFSFSINNVNPS-SFGDGLAFFISPDNQILGS-AGGCLGLVNSS--QLTKNKFVAI 139
           SF++ F F+I N+  S + GDGLAFF++P     G+ +GG LGL NSS    + N  VA+
Sbjct: 61  SFSTSFVFAIKNIPKSTNGGDGLAFFLAPSGTQPGASSGGYLGLFNSSNNGNSSNHIVAV 120

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDT L+P F+D D+NH+G+D++S+ S+ +       +DL SG  I  WIDY    + L 
Sbjct: 121 EFDTFLNPEFNDIDDNHVGIDVNSIISVASESASFVPLDLNSGKPIQVWIDYDGSSKRLS 180

Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
           V ++Y N KP  PLL  ++DLS  L   +YVGFSAST G+TE H + SWSF
Sbjct: 181 VTLAYPN-KPKRPLLSASVDLSTVLPEWVYVGFSASTGGATESHYVLSWSF 230

Length = 231

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  155 bits (395), Expect = 3e-43
 Identities = 83/276 (30%), Positives = 117/276 (42%), Gaps = 38/276 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACLRHKNL 406
           +   R LG G+FG VYKA    +G + AVK  K   E   +      E+ I+  L H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+L+    +K  L LV EY   G L   L      G  LS      I + +   L YLH 
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYL----SRGGPLSEDEAKKIALQILRGLEYLH- 115

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYG 514
                +IHRD+K  NI+LD N   ++            SS   T  GT  Y+APE L  G
Sbjct: 116 --SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGG 173

Query: 515 T-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK--R 571
                K DV+S GV++ E+  G+ P   E    ++  +           RI+    +   
Sbjct: 174 NGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIR----------RILGPPLEFDE 223

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
              +   +E K L+     C N D S RP+   + Q
Sbjct: 224 PKWSSGSEEAKDLI---KKCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  151 bits (385), Expect = 7e-42
 Identities = 78/283 (27%), Positives = 113/283 (39%), Gaps = 54/283 (19%)

Query: 353 NRILGRGAFGNVYKA-YFASSGSV---AAVKRSKHSH--EGKTEFLAELSIIACLRHKNL 406
            + LG GAFG VYK              AVK  K     +   EFL E  I+  L H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LLG C E+  L++V EYMP G L   L + +     LS    L+  + +A  + YL  
Sbjct: 64  VKLLGVCTEEEPLMIVMEYMPGGDLLDYL-RKNRP-KELSLSDLLSFALQIARGMEYLE- 120

Query: 467 ECEQQVIHRDIKASNIMLDANFN--------ARLESSFTLTAGTMG-----YLAPEYLQY 513
              +  IHRD+ A N ++  N          +R            G     ++APE L+ 
Sbjct: 121 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKE 178

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
           G  T K+DV+S+GV++ E+   G  P                    Y      E  +   
Sbjct: 179 GKFTSKSDVWSFGVLLWEIFTLGEEP--------------------YPGMSNAEVLEYLK 218

Query: 573 NGAFNE------DEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
            G           E+ +L+   L C   D   RP+   + +IL
Sbjct: 219 KGYRLPKPPNCPPELYKLM---LQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  151 bits (384), Expect = 9e-42
 Identities = 80/283 (28%), Positives = 113/283 (39%), Gaps = 55/283 (19%)

Query: 353 NRILGRGAFGNVYKA-YFASSGSV---AAVKRSKHSHEGKT--EFLAELSIIACLRHKNL 406
            + LG GAFG VYK       G      AVK  K     +   EFL E  I+  L H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LLG C E+  L +V EYM  G L   L    +N   LS    L+  + +A  + YL  
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYL---RKNRPKLSLSDLLSFALQIARGMEYLE- 119

Query: 467 ECEQQVIHRDIKASNIMLDANFN--------ARLESSFTLTAGTMG-----YLAPEYLQY 513
              +  IHRD+ A N ++  N          +R            G     ++APE L+ 
Sbjct: 120 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKE 177

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
           G  T K+DV+S+GV++ E+   G +P                    Y      E  +   
Sbjct: 178 GKFTSKSDVWSFGVLLWEIFTLGEQP--------------------YPGMSNEEVLEYLK 217

Query: 573 NGAFNE------DEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
           NG           E+  L+   L C   D   RP+   + +IL
Sbjct: 218 NGYRLPQPPNCPPELYDLM---LQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  151 bits (383), Expect = 1e-41
 Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 44/278 (15%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVA----AVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
            + LG GAFG VYK      G       AVK  K   S E + EFL E SI+  L H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNI 63

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LLG C +   L +V EYMP G L   L +   +G  L+    L + + +A  + YL  
Sbjct: 64  VRLLGVCTQGEPLYIVTEYMPGGDLLDFLRK---HGEKLTLKDLLQMALQIAKGMEYLE- 119

Query: 467 ECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLTAGTMGYL-----APEYLQ 512
              +  +HRD+ A N ++  N   +         +           G L     APE L+
Sbjct: 120 --SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLK 177

Query: 513 YGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
            G  T K+DV+S+GV++ E+   G +P    +   +++ L++       +G  +   +  
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMS-NEEVLELLE-------DGYRLPRPEN- 228

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
                  DE+  L+   L C   D   RP+   + + L
Sbjct: 229 -----CPDELYELM---LQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  150 bits (382), Expect = 2e-41
 Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 51/284 (17%)

Query: 354 RILGRGAFGNVYKAYF---ASSGSVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQ 408
           + LG GAFG VYK          +  AVK  K   S E + +FL E  ++  L H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML-----YQDSENGVLLSWYHRLNIVVGLASALTY 463
           LLG C E+  L LV EYM  G L   L        S     LS    L+  + +A  + Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLTAGTMG-----YLAPE 509
           L     ++ +HRD+ A N ++  +   +         +         T G     ++APE
Sbjct: 121 LA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPE 177

Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA- 567
            L+ G  T K+DV+S+GV++ E+   G  P                  GL  E  ++E  
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP----------------GLSNE-EVLEYL 220

Query: 568 -ADKRLNGAFN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
               RL       DE+  L+   LSC   D   RP+   + + L
Sbjct: 221 RKGYRLPKPEYCPDELYELM---LSCWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  148 bits (375), Expect = 2e-40
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE--FLAELSIIACLRHKNLVQLLG 411
             LG G+FG VY A    +G + A+K  K     K     L E+ I+  L+H N+V+L  
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              ++ +L LV EY   G L  +L    +    LS       +  + SAL YLH    + 
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLL----KKRGRLSEDEARFYLRQILSALEYLHS---KG 117

Query: 472 VIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           ++HRD+K  NI+LD + + +L               T   GT  Y+APE L      +  
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAV 177

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           D++S GV++ E+  G+ P   + +  ++   +
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKI 209

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  145 bits (367), Expect = 8e-40
 Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G FG VY A    +G   A+K  K         E L E+ I+  L H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  L LV EY   GSL  +L    EN   LS    L I++ +   L YLH      +I
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLK---ENEGKLSEDEILRILLQILEGLEYLH---SNGII 114

Query: 474 HRDIKASNIMLD-------------ANFNARLESSFTLTAGTMGYLAPEYL-QYGTATEK 519
           HRD+K  NI+LD             +      +S      GT  Y+APE L   G  +EK
Sbjct: 115 HRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEK 174

Query: 520 TDVFSYGVVVLE 531
           +D++S GV++ E
Sbjct: 175 SDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  128 bits (325), Expect = 1e-33
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G+FG VY     S G +  +K    S  S + + + L E+ I+  L H N+++  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               EKG+L +V EY   G L + + +  + G        L+  V L  AL YLH    +
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SR 122

Query: 471 QVIHRDIKASNIMLDANFNARL---------ESSFTLT---AGTMGYLAPEYLQYGTATE 518
           +++HRDIK  NI L +N   +L          S+  L     GT  YL+PE  Q      
Sbjct: 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNY 182

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           K+D++S G V+ E+   + P     EG  ++ L           +I++     +   ++ 
Sbjct: 183 KSDIWSLGCVLYELCTLKHPF----EGENLLELAL---------KILKGQYPPIPSQYS- 228

Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
            E++ L+    S    D   RPS+ ++ Q 
Sbjct: 229 SELRNLV---SSLLQKDPEERPSIAQILQS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  126 bits (319), Expect = 9e-33
 Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 30/206 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF-LAELSIIACLRHKNLVQLLGWCA 414
           +G+G FG VYKA    +G   A+K  K   + K E  + E+ I+   +H N+V+  G   
Sbjct: 8   IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTYLHQEC 468
           +K EL +V E+   GSL           +L S    L       +   L   L YLH   
Sbjct: 68  KKDELWIVMEFCSGGSLKD---------LLKSTNQTLTESQIAYVCKELLKGLEYLH--- 115

Query: 469 EQQVIHRDIKASNIML---------DANFNARLESSFTL--TAGTMGYLAPEYLQYGTAT 517
              +IHRDIKA+NI+L         D   +A+L  +       GT  ++APE +      
Sbjct: 116 SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYD 175

Query: 518 EKTDVFSYGVVVLEVACGRRPIERET 543
            K D++S G+  +E+A G+ P     
Sbjct: 176 YKADIWSLGITAIELAEGKPPYSELP 201

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  120 bits (304), Expect = 1e-30
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 38/210 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLL 410
            +LGRG+FG+VY A    +G + AVK  + S + + E      E+ I++ L+H N+V+  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 411 G--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI-VVG-----LASALT 462
           G     EK  L +  EY+  GSL  +L +          + +L   V+      +   L 
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLLKK----------FGKLPEPVIRKYTRQILEGLA 115

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAP 508
           YLH      ++HRDIK +NI++D++   +L                      GT  ++AP
Sbjct: 116 YLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAP 172

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           E ++        D++S G  V+E+A G+ P
Sbjct: 173 EVIRGEEYGRAADIWSLGCTVIEMATGKPP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score =  110 bits (277), Expect = 2e-27
 Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 23/233 (9%)

Query: 26  NFDFTSFNLR-NITLLGDSYL--RNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTT 82
           NF   S N + N  L G + L   +GV+ LT + G   + +GS  Y  P+         +
Sbjct: 4   NFSNFSNNNQSNWQLNGSATLTTDSGVLRLTPDTG---NQAGSAWYKTPIDL-------S 53

Query: 83  ASFTSRFSFSINNVNPSSFGDGLAFFISPDN-QILGSAGGCLGLVNSSQLTKNKFVAIEF 141
             FT+ F F +     +   DG+AF +  D    LG  GG  GL           VA+EF
Sbjct: 54  KDFTTTFKFYLGTKGTNG-ADGIAFVLQNDPAGALGGGGGGGGLGYGGI---GNSVAVEF 109

Query: 142 DTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVI----TAWIDYKNDLRM 197
           DT  +   +DP+ NHI +D++   +       L    L +G  +    T  I Y      
Sbjct: 110 DTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSASLPNGTGLGNEHTVRITYDPTTNT 169

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
           L V++   +    +  + + +DL        Y GF+AST G T LH I +WSF
Sbjct: 170 LTVYLDNGS-TLTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSF 221

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  111 bits (279), Expect = 2e-27
 Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 17/197 (8%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G FG+V    +   G   AVK  K        FLAE S++  LRH NLVQLLG   +
Sbjct: 14  IGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EYM  GSL  + Y  S    +++   +L   + +   + YL    E+  +HR
Sbjct: 72  GNPLYIVTEYMAKGSL--VDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHR 126

Query: 476 DIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVFSYG 526
           D+ A N+++        ++F    E+S    +G +   + APE L+    + K+DV+S+G
Sbjct: 127 DLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFG 186

Query: 527 VVVLEV-ACGRRPIERE 542
           +++ E+ + GR P  R 
Sbjct: 187 ILLWEIYSFGRVPYPRI 203

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  107 bits (270), Expect = 3e-26
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 28/202 (13%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           ++GRGAFG VYK     +G   A+K+    K   E     + E+ ++  L+H N+V+ +G
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                  L ++ EY  NGSL +++ +     E+  L++ Y    ++ GLA    YLH   
Sbjct: 67  SIETSDSLYIILEYAENGSLRQIIKKFGPFPES--LVAVYVY-QVLQGLA----YLH--- 116

Query: 469 EQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTA 516
           EQ VIHRDIKA+NI+   +   +L                    GT  ++APE ++   A
Sbjct: 117 EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGA 176

Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
           +  +D++S G  V+E+  G  P
Sbjct: 177 STASDIWSLGCTVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  106 bits (267), Expect = 1e-25
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 21/208 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V K     +G + AVK  R + +   + + L EL I+       +V   G  
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68

Query: 414 AEKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              G++ +  EYM  GSLD++L   Q      +L       I V +   LTYLH++   +
Sbjct: 69  YNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLHEK--HK 121

Query: 472 VIHRDIKASNIMLDA-------NF--NARLESSFTLT-AGTMGYLAPEYLQYGTATEKTD 521
           +IHRD+K SNI++++       +F  + +L +S   T  GT  Y+APE +Q    + K+D
Sbjct: 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSD 181

Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMV 549
           ++S G+ ++E+A GR P   E +    +
Sbjct: 182 IWSLGLSLIELATGRFPYPPENDPPDGI 209

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  106 bits (267), Expect = 1e-25
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 28/208 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G       A+K  R + S +   E L E  ++A + H ++V
Sbjct: 13  KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C    ++ L+ + MP G L   +    +N   +   + LN  V +A  ++YL   
Sbjct: 73  RLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDN---IGSQYLLNWCVQIAKGMSYLE-- 126

Query: 468 CEQQVIHRDIKASNIMLD-------ANFN-ARL----ESSFTLTAGTM--GYLAPEYLQY 513
            E++++HRD+ A N+++         +F  A+L    E  +    G +   ++A E + +
Sbjct: 127 -EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH 185

Query: 514 GTATEKTDVFSYGVVVLEVAC-GRRPIE 540
              T K+DV+SYGV V E+   G +P E
Sbjct: 186 RIYTHKSDVWSYGVTVWELMTFGAKPYE 213

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  104 bits (260), Expect = 6e-25
 Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 36/270 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 73

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   ++    L +   ++SA+ YL +   +  IHR
Sbjct: 74  EPPFYIITEFMTYGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHR 128

Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++        A+F  +RL    ++T  AG    + + APE L Y   + K+DV
Sbjct: 129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 188

Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEM 581
           +++GV++ E+A  G  P       +  ++L   V+ L  +G  +E    R  G     ++
Sbjct: 189 WAFGVLLWEIATYGMSP-------YPGIDLSQ-VYELLEKGYRME----RPEGC--PPKV 234

Query: 582 KRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             L+    +C   + S RPS   + Q    
Sbjct: 235 YELM---RACWQWNPSDRPSFAEIHQAFET 261

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =  103 bits (259), Expect = 1e-24
 Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 41/214 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-------FLAELSIIACLRHKNL 406
           + LG GAF + Y+A    +G++ AVK+  +     +E          E+ ++A L H ++
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++LG   E     L  E+M  GS+  +L  Y   +  V++++  +  ++ GL+    YL
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQ--LLRGLS----YL 119

Query: 465 HQECEQQVIHRDIKASNIMLD--------ANFNA--RLESSFTLTA-------GTMGYLA 507
           H   E Q+IHRD+K +N+++D        A+F A  RL +  T          GT+ ++A
Sbjct: 120 H---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMA 176

Query: 508 PEYL---QYGTATEKTDVFSYGVVVLEVACGRRP 538
           PE L   QYG +    DV+S G V++E+A  + P
Sbjct: 177 PEVLRGEQYGRS---CDVWSVGCVIIEMATAKPP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  102 bits (257), Expect = 1e-24
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 30/210 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G+G+FG V+K    +   V A+K+   SK +   + E + E  ++A L    +++    
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQD-----SENGVLLSWYHRLNIVVGLASALTYLHQE 467
             +KG+L +V EY  NG L ++L         E+ V   W   + I++GLA    +LH  
Sbjct: 68  FLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQV---WRFFIQILLGLA----HLHS- 119

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARLESSFTLTA----GTMGYLAPEYLQYGT 515
             ++++HRDIK+ N+ LDA  N        A+L S  T  A    GT  YL+PE  +   
Sbjct: 120 --KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP 177

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEG 545
             EK+DV++ GVV+ E   G+ P +   +G
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANNQG 207

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  100 bits (251), Expect = 1e-23
 Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 39/210 (18%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA---ELSIIACLRHKNLVQLLGW 412
           +G G FG VY A    +G + AVK  +              E+ ++  L+H NLV+  G 
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG-----LASALTYLHQE 467
              + ++ +  EY   G+L+ +L    E+G +L        V+      L   L YLH  
Sbjct: 68  EVHREKVYIFMEYCSGGTLEELL----EHGRILD-----EHVIRVYTLQLLEGLAYLH-- 116

Query: 468 CEQQVIHRDIKASNIMLDAN-------FNA--RLESSFTL-------TAGTMGYLAPEYL 511
               ++HRDIK +NI LD N       F    +L+++ T         AGT  Y+APE +
Sbjct: 117 -SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI 175

Query: 512 QYGTATEK---TDVFSYGVVVLEVACGRRP 538
             G         D++S G VVLE+A G+RP
Sbjct: 176 TGGKGKGHGRAADIWSLGCVVLEMATGKRP 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  100 bits (250), Expect = 1e-23
 Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 23/195 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
             +G+G FG+VYK     +  VA VK  RS    + K +FL E  I+    H N+V+L+G
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVA-VKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIG 59

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C +K  + +V E +P GSL   L +  +N   L+    L + +  A+ + YL  +    
Sbjct: 60  VCVQKQPIYIVMELVPGGSLLTFL-RKKKNR--LTVKKLLQMSLDAAAGMEYLESKN--- 113

Query: 472 VIHRDIKASNIMLDAN-------FN-ARLESS--FTLTAGT----MGYLAPEYLQYGTAT 517
            IHRD+ A N ++  N       F  +R E    +T++ G     + + APE L YG  T
Sbjct: 114 CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYT 173

Query: 518 EKTDVFSYGVVVLEV 532
            ++DV+SYG+++ E 
Sbjct: 174 SESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  100 bits (250), Expect = 1e-23
 Identities = 67/203 (33%), Positives = 96/203 (47%), Gaps = 20/203 (9%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
               R LG G FG V+   +  +  VA VK  K        FL E  I+  LRH  LVQL
Sbjct: 8   LKLERKLGAGQFGEVWMGTWNGTTKVA-VKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
              C+E+  + +V EYM  GSL  + +  S  G  L     +++   +A  + YL     
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSL--LDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---S 121

Query: 470 QQVIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGT---MGYLAPEYLQYGTA 516
           +  IHRD+ A NI++  N          ARL  +  +T   G    + + APE   YG  
Sbjct: 122 RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRF 181

Query: 517 TEKTDVFSYGVVVLE-VACGRRP 538
           T K+DV+S+G+++ E V  GR P
Sbjct: 182 TIKSDVWSFGILLTEIVTYGRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score =  100 bits (251), Expect = 2e-23
 Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
             LG GA G+V K    ++G + A+K   +  + + + + L EL I    +   +V+  G
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYG 66

Query: 412 WCAEK--GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
              ++    + +  EY   GSLD +  +  + G  +       I   +   L+YLH    
Sbjct: 67  AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---S 123

Query: 470 QQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTA 516
           +++IHRDIK SNI+L      +L               +FT   GT  Y+APE +Q    
Sbjct: 124 RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFT---GTSFYMAPERIQGKPY 180

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETE 544
           +  +DV+S G+ +LEVA  R P   E E
Sbjct: 181 SITSDVWSLGLTLLEVAQNRFPFPPEGE 208

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score =  103 bits (258), Expect = 8e-23
 Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 26/323 (8%)

Query: 301 AFFCVVLAVFGYISIKKWKNMRTGICLRADLVPGPREFSYRELRSAT-----RGFHSNRI 355
           AF  + L  FG++ I+   N+        D     + F  +  +S T            +
Sbjct: 638 AFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENV 697

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           + RG  G  YK     +G    VK     +   +  +A++     L+H N+V+L+G C  
Sbjct: 698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGK---LQHPNIVKLIGLCRS 754

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    L++EY+   +L  +L         LSW  R  I +G+A AL +LH  C   V+  
Sbjct: 755 EKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807

Query: 476 DIKASNIMLDANFNARLESSF-------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVV 528
           ++    I++D      L  S        T    +  Y+APE  +    TEK+D++ +G++
Sbjct: 808 NLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLI 867

Query: 529 VLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK--RLNGAFNEDEMKRLLL 586
           ++E+  G+ P + E   H   ++V+W    Y++  +    D   R + + N++E+  ++ 
Sbjct: 868 LIELLTGKSPADAEFGVHG--SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMN 925

Query: 587 VGLSCANPDSSARPSMRRVFQIL 609
           + L C   D +ARP    V + L
Sbjct: 926 LALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 98.1 bits (244), Expect = 8e-23
 Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 27/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSG---SVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQ 408
           +++G G FG V++      G      A+K  K  ++ + + +FL+E SI+    H N+++
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G   +    +++ EYM NG+LD+ L    ++    S Y  + ++ G+A+ + YL    
Sbjct: 71  LEGVVTKFKPAMIITEYMENGALDKYL---RDHDGEFSSYQLVGMLRGIAAGMKYL---S 124

Query: 469 EQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYLQY 513
           +   +HRD+ A NI++++N   ++             E ++T + G +   + APE + Y
Sbjct: 125 DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY 184

Query: 514 GTATEKTDVFSYGVVVLEV-ACGRRP 538
              T  +DV+S+G+V+ EV + G RP
Sbjct: 185 RKFTSASDVWSFGIVMWEVMSFGERP 210

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 97.9 bits (244), Expect = 9e-23
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 27/204 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT------EFLAELSIIACLRHKNLV 407
            +LG G+FG+VY+      G   AVK    + +G+T      +   E+++++ L+H N+V
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           Q LG   E+  L +  E +P GSL ++L +  S    ++  Y R  I++GL     YLH 
Sbjct: 66  QYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTR-QILLGLE----YLH- 119

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT-AGTMGYLAPEYL-QYG 514
             ++  +HRDIK +NI++D N   +L          E SF  +  G+  ++APE + Q G
Sbjct: 120 --DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG 177

Query: 515 TATEKTDVFSYGVVVLEVACGRRP 538
                 D++S G  VLE+A G+ P
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPP 201

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 97.5 bits (243), Expect = 2e-22
 Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 39/219 (17%)

Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG V+              + AVK  K   S++ + +F  E  ++   +H+N+
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI 70

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRML-----------YQDSENGVLLSWYHRLNIVV 455
           V+  G C E    ++V+EYM +G L++ L             DS  G  L+    L I V
Sbjct: 71  VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE-LTLSQLLQIAV 129

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------------AGTM 503
            +AS + YL     Q  +HRD+   N ++  +   ++   F ++              TM
Sbjct: 130 QIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKI-GDFGMSRDVYTTDYYRVGGHTM 185

Query: 504 ---GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
               ++ PE + Y   T ++DV+S+GVV+ E+   G++P
Sbjct: 186 LPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 96.9 bits (242), Expect = 2e-22
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 32/203 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR--SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG+G+ G VYK     +G + A+K+       E + + L EL  +       +V+  G  
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF 68

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
            ++GE+ +V EYM  GSL  +L +     E  VL        I   +   L YLH   ++
Sbjct: 69  YKEGEISIVLEYMDGGSLADLLKKVGKIPEP-VLAY------IARQILKGLDYLHT--KR 119

Query: 471 QVIHRDIKASNIMLD-------ANF--NARLESSFTLTA---GTMGYLAPEYLQ---YGT 515
            +IHRDIK SN++++       A+F  +  LE++        GT+ Y++PE +Q   Y  
Sbjct: 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSY 179

Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
           A    D++S G+ +LE A G+ P
Sbjct: 180 A---ADIWSLGLTLLECALGKFP 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 96.6 bits (241), Expect = 3e-22
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 28/207 (13%)

Query: 353 NRILGRGAFGNVYKAYFASSGS---VAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
            +++G G FG V +      G      A+K  ++  S + + +FL E SI+    H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L G   +   ++++ EYM NGSLD+ L ++       +    + ++ G+AS + YL + 
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK---FTVGQLVGMLRGIASGMKYLSEM 125

Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG---------TMG------YLAPEYLQ 512
                +HRD+ A NI++++N   ++ S F L+           T G      + APE + 
Sbjct: 126 N---YVHRDLAARNILVNSNLVCKV-SDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIA 181

Query: 513 YGTATEKTDVFSYGVVVLEV-ACGRRP 538
           Y   T  +DV+S+G+V+ EV + G RP
Sbjct: 182 YRKFTSASDVWSFGIVMWEVMSYGERP 208

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 95.9 bits (239), Expect = 4e-22
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 38/223 (17%)

Query: 356 LGRGAFGNVYKAYFASSGSV---AAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLL 410
           LG G FG+V K  +          AVK  K  H   GK EFL E S++A L H  +V+L+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 411 GWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGV--LLSWYHRLNIVVGLASALTYLHQE 467
           G C  KGE L+LV E  P G L + L +  E  V  L    H+      +A  + YL   
Sbjct: 63  GVC--KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQ------VAMGMAYLE-- 112

Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMG-----YLAPEYL 511
             +  +HRD+ A N++L     A++ S F +            A T G     + APE +
Sbjct: 113 -SKHFVHRDLAARNVLLVNRHQAKI-SDFGMSRALGAGSDYYRATTAGRWPLKWYAPECI 170

Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVD 553
            YG  + K+DV+SYGV + E  + G +P   E +G +++ +++
Sbjct: 171 NYGKFSSKSDVWSYGVTLWEAFSYGAKPY-GEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 96.6 bits (240), Expect = 5e-22
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 33/207 (15%)

Query: 355 ILGRGAFGNVYKAYFASSG--SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ L
Sbjct: 14  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73

Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD------SENGVLLSWYHRLNIVVGL 457
           LG C  +G L L  EY P+G+L       R+L  D      +     LS    L+    +
Sbjct: 74  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A  + YL Q   +Q IHRD+ A NI++  N+ A++ + F L+ G       TMG     +
Sbjct: 134 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVRW 189

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T  +DV+SYGV++ E+
Sbjct: 190 MAIESLNYSVYTTNSDVWSYGVLLWEI 216

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 95.6 bits (238), Expect = 6e-22
 Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLR 402
              F   + +G+G F  VYKA     G V A+K+ +       + + + L E+ ++  L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           H N+++ L    E  EL +V E    G L RM+    +   L+         V L SAL 
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLE--------SSFTLTA----GTMGYLAPEY 510
           ++H    ++++HRDIK +N+ + A    +L         SS T  A    GT  Y++PE 
Sbjct: 121 HMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD- 569
           +       K+D++S G ++ E+A  + P      G KM         LY+  + IE  D 
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKM--------NLYSLCKKIEKCDY 225

Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
             L      +E++ L+     C NPD   RP +  V Q+
Sbjct: 226 PPLPADHYSEELRDLVSR---CINPDPEKRPDISYVLQV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 97.9 bits (242), Expect = 7e-22
 Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 28/232 (12%)

Query: 349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-FLAELSIIACLRH-KNL 406
            +   R LG G+FG VY A      ++  + +   S   + E FL E+ I+A L H  N+
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+L  +  ++G L LV EY+  GSL+ +L +    G L      L I+  + SAL YLH 
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSE-SEALFILAQILSALEYLH- 118

Query: 467 ECEQQVIHRDIKASNIMLDANFN---------ARLESSFTLTA----------GTMGYLA 507
              + +IHRDIK  NI+LD +           A+L      T+          GT GY+A
Sbjct: 119 --SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176

Query: 508 PEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW 556
           PE L       A+  +D++S G+ + E+  G  P E E         +  + 
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228

Length = 384

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 94.5 bits (236), Expect = 1e-21
 Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 40/221 (18%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAV----KRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG+G+FG V       +G + A+    K+     +     L E +I++ + H  +V+L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL-- 58

Query: 412 WCA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTY 463
             A   + +L LV EY P G L   L +            R +          +  AL Y
Sbjct: 59  HYAFQTEEKLYLVLEYAPGGELFSHLSK----------EGRFSEERARFYAAEIVLALEY 108

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYL 511
           LH      +I+RD+K  NI+LDA+ + +L           E S T T  GT  YLAPE L
Sbjct: 109 LH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVL 165

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
                 +  D +S GV++ E+  G+ P   E    ++   +
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKI 205

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 94.5 bits (236), Expect = 2e-21
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQL 409
             +G G +G VYKA    +G + A+K+ +  +E K  F    + E+ ++  LRH N+V+L
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENE-KEGFPITAIREIKLLQKLRHPNIVRL 63

Query: 410 LGWCAEK--GELLLVYEYMP---NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                 K  G + +V+EYM     G LD    + +E   +  +  +L         L YL
Sbjct: 64  KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTE-SQIKCYMKQL------LEGLQYL 116

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAG--TMGYLAPEYL 511
           H      ++HRDIK SNI+++ +   +L            +S   T    T+ Y  PE L
Sbjct: 117 HS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELL 173

Query: 512 ----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
               +YG      D++S G ++ E+  G+   +  TE  ++
Sbjct: 174 LGATRYGPE---VDMWSVGCILAELFLGKPIFQGSTELEQL 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 93.6 bits (233), Expect = 3e-21
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 20/199 (10%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           R LG G FG V++  + ++  VA VK  K       +FLAE  I+  LRH  L+QL   C
Sbjct: 12  RKLGAGQFGEVWEGLWNNTTPVA-VKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC 70

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +  + +V E M  GSL  + Y     G  L     +++   +AS + YL     Q  I
Sbjct: 71  TLEEPIYIVTELMKYGSL--LEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYI 125

Query: 474 HRDIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKT 520
           HRD+ A N+++        A+F  AR+  E  +    G    + + APE   Y   + K+
Sbjct: 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKS 185

Query: 521 DVFSYGVVVLE-VACGRRP 538
           DV+S+G+++ E V  GR P
Sbjct: 186 DVWSFGILLTEIVTYGRMP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 93.3 bits (232), Expect = 3e-21
 Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 27/207 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGW 412
           LG G FG V+   +     VA     K   EG   + +F+ E  ++  L H NLVQL G 
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAI----KMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           C ++  + +V EYM NG L   L +       L     L++   +  A+ YL        
Sbjct: 68  CTKQRPIFIVTEYMANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLE---SNGF 121

Query: 473 IHRDIKASNIMLDANFN--------AR--LESSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  +          AR  L+  +T + GT   + +  PE   Y   + K
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSK 181

Query: 520 TDVFSYGVVVLEV-ACGRRPIERETEG 545
           +DV+S+GV++ EV + G+ P ER +  
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYERFSNS 208

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 92.9 bits (231), Expect = 7e-21
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 37/205 (18%)

Query: 354 RILGRGAFGNVYKAYFA----SSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLV 407
           + LG G FG V    +     ++G   AVK   HS E +  ++F  E+ I+  L H+N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSEN---GVLLSWYHRLNIVVGLASALT 462
           +  G C + G   L L+ EY+P+GSL   L +  +      LL +         +   + 
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLF------SSQICKGMD 123

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-AGTMG---------------YL 506
           YL     Q+ IHRD+ A NI++++    ++ S F L                      + 
Sbjct: 124 YLG---SQRYIHRDLAARNILVESEDLVKI-SDFGLAKVLPEDKDYYYVKEPGESPIFWY 179

Query: 507 APEYLQYGTATEKTDVFSYGVVVLE 531
           APE L+    +  +DV+S+GV + E
Sbjct: 180 APECLRTSKFSSASDVWSFGVTLYE 204

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 91.6 bits (227), Expect = 1e-20
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 21/204 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+     VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 12  IGSGQFGLVWLGYWLEKRKVA-IKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G   S    L + + +   + YL       VIHR
Sbjct: 71  RSPICLVFEFMEHGCLSD--YLRAQRG-KFSQETLLGMCLDVCEGMAYLESSN---VIHR 124

Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDV 184

Query: 523 FSYGVVVLEV-ACGRRPIERETEG 545
           +S+GV++ EV + G+ P E  +  
Sbjct: 185 WSFGVLMWEVFSEGKTPYENRSNS 208

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 90.7 bits (225), Expect = 3e-20
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 29/207 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGS---VAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQ 408
           +++G G FG V        G      A+K  K  ++ + + +FL+E SI+    H N++ 
Sbjct: 10  KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G   +   +++V EYM NGSLD  L + D +  V+      + ++ G+AS + YL   
Sbjct: 70  LEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVI----QLVGMLRGIASGMKYL--- 122

Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYLQ 512
            +   +HRD+ A NI++++N   ++             E+++T   G +   + APE + 
Sbjct: 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182

Query: 513 YGTATEKTDVFSYGVVVLEV-ACGRRP 538
           Y   T  +DV+SYG+V+ EV + G RP
Sbjct: 183 YRKFTSASDVWSYGIVMWEVMSYGERP 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 90.2 bits (224), Expect = 4e-20
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 19/196 (9%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNLVQ 408
           F   R LG G FG V++  + +   VA +K  K     K  +F  E+  +  LRHK+L+ 
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVA-IKILKSDDLLKQQDFQKEVQALKRLRHKHLIS 66

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L   C+    + ++ E M  GSL  + +  S  G +L     +++   +A  + YL    
Sbjct: 67  LFAVCSVGEPVYIITELMEKGSL--LAFLRSPEGQVLPVASLIDMACQVAEGMAYLE--- 121

Query: 469 EQQVIHRDIKASNIMLD-------ANFN-ARL-ESSFTLTAGT---MGYLAPEYLQYGTA 516
           EQ  IHRD+ A NI++        A+F  ARL +    L++       + APE   +GT 
Sbjct: 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTF 181

Query: 517 TEKTDVFSYGVVVLEV 532
           + K+DV+S+G+++ E+
Sbjct: 182 STKSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 89.5 bits (222), Expect = 6e-20
 Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 21/197 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA +K  K        FLAE +++  L+H  LV+L      
Sbjct: 14  LGAGQFGEVWMGYYNGHTKVA-IKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYA-VVT 71

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL  + +  +  G+ L+    +++   +A  + ++ +   +  IHR
Sbjct: 72  QEPIYIITEYMENGSL--VDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHR 126

Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 127 DLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 186

Query: 523 FSYGVVVLE-VACGRRP 538
           +S+G+++ E V  GR P
Sbjct: 187 WSFGILLTEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 89.4 bits (222), Expect = 9e-20
 Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 42/213 (19%)

Query: 356 LGRGAFGNVYKA-----YFASSGSVAAVKRSKHSHEGKT--EFLAELSIIACLRHKNLVQ 408
           LG GAFG VYK          S +  A+K  K + E K   EF  E  +++ L+H N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML------------YQDSENGVLLSWYHRLNIVVG 456
           LLG C ++    +++EY+ +G L   L              D      L     L+I + 
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGY----------- 505
           +A+ + YL        +HRD+ A N ++      ++ S F L+     Y           
Sbjct: 133 IAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKI-SDFGLS--RDIYSADYYRVQSKS 186

Query: 506 ------LAPEYLQYGTATEKTDVFSYGVVVLEV 532
                 + PE + YG  T ++D++S+GVV+ E+
Sbjct: 187 LLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 88.9 bits (221), Expect = 1e-19
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 32/212 (15%)

Query: 349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTE-FLAELSIIACLRHK 404
            F   R++G+GAFG V       +  + A+K   + K   +G     L E  I+  L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 405 NLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLAS 459
            LV L  W + + E  + LV + +  G L   L Q    SE  V          +  +  
Sbjct: 61  FLVNL--WYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKF-------WICEIVL 111

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAP 508
           AL YLH    + +IHRDIK  NI+LD   +  +           ++  T T+GT GY+AP
Sbjct: 112 ALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAP 168

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
           E L     +   D +S GV   E   G+RP  
Sbjct: 169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYR 200

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 43/278 (15%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLLG 411
            +G+G+FG V K    S G +   K   + +  + E    ++E++I+  L+H N+V+   
Sbjct: 7   TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66

Query: 412 WC--AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH--QE 467
                    L +V EY   G L +++ +  +    +       I+  L  AL   H   +
Sbjct: 67  RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126

Query: 468 CEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYGT 515
               V+HRD+K +NI LDAN N +L           +SSF  T  GT  Y++PE L + +
Sbjct: 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS 186

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE--GRIIEAADKRLN 573
             EK+D++S G ++ E+     P                      +   +I E   +R+ 
Sbjct: 187 YDEKSDIWSLGCLIYELCALSPPFTARN---------------QLQLASKIKEGKFRRIP 231

Query: 574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             ++ +    L  V  S  N D   RPS     ++L  
Sbjct: 232 YRYSSE----LNEVIKSMLNVDPDKRPS---TEELLQL 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 88.4 bits (219), Expect = 2e-19
 Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 35/212 (16%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR---------SKHSHEGKTEFLA-ELSIIACLRHK 404
           ++G G+FG+VY    ASSG + AVK+         SK       + LA E++++  L+H+
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           N+VQ LG   +   L +  EY+P GS+  +L      G       R N V  +   L YL
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN---YGAFEETLVR-NFVRQILKGLNYL 122

Query: 465 HQECEQQVIHRDIKASNIMLD-------ANF--NARLESSFTLTA---------GTMGYL 506
           H    + +IHRDIK +NI++D       ++F  + +LE++   T          G++ ++
Sbjct: 123 HN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM 179

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           APE ++  + T K D++S G +V+E+  G+ P
Sbjct: 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 33/209 (15%)

Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++G G FG V +      G      A+K  +S ++ + + +FL+E SI+    H N++ L
Sbjct: 11  VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
            G   +   ++++ E+M NG+LD  L Q D +  V+      + ++ G+A+ + YL    
Sbjct: 71  EGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI----QLVGMLRGIAAGMKYL---S 123

Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLT------------AGTMG------YLAPEY 510
           E   +HRD+ A NI++++N   ++ S F L+              ++G      + APE 
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKV-SDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182

Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   T  +DV+SYG+V+ EV + G RP
Sbjct: 183 IAYRKFTSASDVWSYGIVMWEVMSYGERP 211

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 87.7 bits (217), Expect = 3e-19
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 28/215 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 12  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVI 68

Query: 414 AE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            E KG L +V EYM  GSL  + Y  S    +L     L   + +  A+ YL        
Sbjct: 69  VEEKGGLYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNF 123

Query: 473 IHRDIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++        ++F    E+S T   G +   + APE L+    + K+DV+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183

Query: 524 SYGVVVLEV-ACGRRP---------IERETEGHKM 548
           S+G+++ E+ + GR P         + R  +G+KM
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 88.0 bits (219), Expect = 4e-19
 Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 26/199 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G GA G VYKA   ++G   A+K+ +   + K   + E+ I+   +H N+V        
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV 86

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
             EL +V EYM  GSL  ++ Q   N V ++      +   +   L YLH    Q VIHR
Sbjct: 87  GDELWVVMEYMDGGSLTDIITQ---NFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHR 140

Query: 476 DIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQ---YGTATEK 519
           DIK+ NI+L  + + +L + F   A             GT  ++APE ++   YG    K
Sbjct: 141 DIKSDNILLSKDGSVKL-ADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGP---K 196

Query: 520 TDVFSYGVVVLEVACGRRP 538
            D++S G++ +E+A G  P
Sbjct: 197 VDIWSLGIMCIEMAEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 87.6 bits (217), Expect = 4e-19
 Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 46/213 (21%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR--SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +LG+G +G VY A   S+    A+K    + S   +     E+++ + L+H+N+VQ LG 
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQP-LHEEIALHSYLKHRNIVQYLGS 73

Query: 413 CAEKGELLLVYEYMPNGSLDRML------YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
            +E G   +  E +P GSL  +L       +D+E  ++   ++   I+ G    L YLH 
Sbjct: 74  DSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTII---FYTKQILEG----LKYLH- 125

Query: 467 ECEQQVIHRDIKASNIML----------DANFNARL------ESSFTLTAGTMGYLAPEY 510
             + Q++HRDIK  N+++          D   + RL        +FT   GT+ Y+APE 
Sbjct: 126 --DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GTLQYMAPEV 180

Query: 511 LQ-----YGTATEKTDVFSYGVVVLEVACGRRP 538
           +      YG      D++S G  ++E+A G+ P
Sbjct: 181 IDKGPRGYGAP---ADIWSLGCTIVEMATGKPP 210

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 87.1 bits (216), Expect = 6e-19
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-FLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +G  AA K  +   E + E F+ E+ I++  +H N+V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
            + +L ++ E+   G+LD ++        L     R  +   +  AL +LH     +VIH
Sbjct: 73  YENKLWILIEFCDGGALDSIM--LELERGLTEPQIRY-VCRQMLEALNFLH---SHKVIH 126

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATE--- 518
           RD+KA NI+L  + + +L + F ++A             GT  ++APE +   T  +   
Sbjct: 127 RDLKAGNILLTLDGDVKL-ADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPY 185

Query: 519 --KTDVFSYGVVVLEVACGRRP 538
             K D++S G+ ++E+A    P
Sbjct: 186 DYKADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 86.8 bits (215), Expect = 8e-19
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 40/218 (18%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK----------RSKHSHEGKTEFL-AELSIIACLRH 403
           ++G+G +G VY A   ++G + AVK          R     +   + L +E+  +  L H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 404 KNLVQLLGWCAEKGELLLVY-EYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASA 460
            N+VQ LG      E L ++ EY+P GS+   L  Y   E  ++  +  +  ++ GLA  
Sbjct: 68  LNIVQYLG-FETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQ--VLEGLA-- 122

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDA-------NF-------NARLESSFTLTAGTMGYL 506
             YLH    + ++HRD+KA N+++DA       +F       +           G++ ++
Sbjct: 123 --YLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177

Query: 507 APE--YLQYGTATEKTDVFSYGVVVLEVACGRRPIERE 542
           APE  +      + K D++S G VVLE+  GRRP   E
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 87.0 bits (215), Expect = 9e-19
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 33/207 (15%)

Query: 355 ILGRGAFGNVYKAYFASSGS--VAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V +A     G    AA+K  K   S     +F  EL ++  L  H N++ L
Sbjct: 9   VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL 68

Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD----SENGV--LLSWYHRLNIVVGL 457
           LG C  +G L +  EY P G+L       R+L  D     E+G    L+    L     +
Sbjct: 69  LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDV 128

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A+ + YL    E+Q IHRD+ A N+++  N  +++ + F L+ G       TMG     +
Sbjct: 129 ATGMQYL---SEKQFIHRDLAARNVLVGENLASKI-ADFGLSRGEEVYVKKTMGRLPVRW 184

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T K+DV+S+GV++ E+
Sbjct: 185 MAIESLNYSVYTTKSDVWSFGVLLWEI 211

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 31/202 (15%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
            LG G++G+VYKA    +G V A+K      E   E + E+SI+       +V+  G   
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIK-VVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYF 68

Query: 415 EKGELLLVYEYMPNGSLDRML------YQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           +  +L +V EY   GS+  ++        + E   +L        + GL     YLH   
Sbjct: 69  KNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL-----YQTLKGLE----YLHS-- 117

Query: 469 EQQVIHRDIKASNIMLDANFNARLES---SFTLT---------AGTMGYLAPEYLQYGTA 516
             + IHRDIKA NI+L+    A+L     S  LT          GT  ++APE +Q    
Sbjct: 118 -NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY 176

Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
             K D++S G+  +E+A G+ P
Sbjct: 177 NNKADIWSLGITAIEMAEGKPP 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 26/199 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRS--KHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG VYKA    +  V A+K    + + +   +   E+  ++  R   + +  G  
Sbjct: 9   IGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF 68

Query: 414 AEKGELLLVYEYMPNGS-LDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            +  +L ++ EY   GS LD +      E  +         I+  +   L YLH   E+ 
Sbjct: 69  LKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAF-------ILREVLLGLEYLH---EEG 118

Query: 472 VIHRDIKASNIMLDANFNARL-------ESSFTLT-----AGTMGYLAPEYLQYGTATEK 519
            IHRDIKA+NI+L    + +L       + + T++      GT  ++APE ++     EK
Sbjct: 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEK 178

Query: 520 TDVFSYGVVVLEVACGRRP 538
            D++S G+  +E+A G  P
Sbjct: 179 ADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 37/277 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKN 405
           F   + +GRG F  VY+A     G   A+K+ +       + + + + E+ ++  L H N
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++      E  EL +V E    G L RM+    +   L+         V L SAL ++H
Sbjct: 64  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH 123

Query: 466 QECEQQVIHRDIKASNIMLDAN-------------FNARLESSFTLTAGTMGYLAPEYLQ 512
               ++V+HRDIK +N+ + A              F+++  ++ +L  GT  Y++PE + 
Sbjct: 124 S---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIH 179

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD-KR 571
                 K+D++S G ++ E+A  + P      G KM         LY+  + IE  D   
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKM--------NLYSLCKKIEQCDYPP 227

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
           L      +E+++L+ +   C NPD   RP +  V+ +
Sbjct: 228 LPSDHYSEELRQLVNM---CINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 42/207 (20%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGW 412
           +G GA+G V K    ++G + A+K+ K S +    K   L E+ ++  LRH+N+V L   
Sbjct: 9   VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEA 68

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGV------LLSWYHRLNIVVGLASALTYLHQ 466
              KG L LV+EY+    L+  L + S  G+         W         L  A+ Y H 
Sbjct: 69  FRRKGRLYLVFEYVERTLLE--LLEASPGGLPPDAVRSYIWQ--------LLQAIAYCHS 118

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYL-- 511
                +IHRDIK  NI++  +   +L              S  T    T  Y APE L  
Sbjct: 119 ---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG 175

Query: 512 --QYGTATEKTDVFSYGVVVLEVACGR 536
              YG      DV++ G ++ E+  G 
Sbjct: 176 DTNYGKP---VDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 85.0 bits (210), Expect = 2e-18
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 23/208 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNL 406
           +   + +G G+FG +Y A   S      +K    +K   + K     E+ ++A ++H N+
Sbjct: 2   YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI 61

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V       E G L +V EY   G L  M   + + GVL S    L+  V ++  L ++H 
Sbjct: 62  VTFFASFQENGRLFIVMEYCDGGDL--MKRINRQRGVLFSEDQILSWFVQISLGLKHIH- 118

Query: 467 ECEQQVIHRDIKASNIMLDAN--------------FNARLESSFTLTAGTMGYLAPEYLQ 512
             +++++HRDIK+ NI L  N               N  +E ++T   GT  YL+PE  Q
Sbjct: 119 --DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT-CVGTPYYLSPEICQ 175

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIE 540
                 KTD++S G V+ E+   + P E
Sbjct: 176 NRPYNNKTDIWSLGCVLYELCTLKHPFE 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 85.2 bits (211), Expect = 2e-18
 Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 44/275 (16%)

Query: 356 LGRGAFGNVYKA-YFASSGSVAAVKR-----------SKHSHEGKTEFLAELSII-ACLR 402
           LG GAFG VYK     +  ++ A+K             +   +   + ++E++II   LR
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           H N+V+      E   L +V + +    L        E     +     NI V +  AL 
Sbjct: 68  HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYL 511
           YLH+E  ++++HRD+  +NIML  +    +           ES  T   GT+ Y  PE +
Sbjct: 128 YLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIV 185

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
           +     EK DV+++G ++ ++ C  +P    T    M++L           +I+EA  + 
Sbjct: 186 KNEPYGEKADVWAFGCILYQM-CTLQPPFYST---NMLSLAT---------KIVEAVYEP 232

Query: 572 LN-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRV 605
           L  G ++ED    +  V  SC  PD+ ARP + +V
Sbjct: 233 LPEGMYSED----VTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 84.4 bits (209), Expect = 4e-18
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLAELSIIACLRHKN 405
            F   + LG+G++G+VYK    S     A+K       S + + + + E+ I+A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           ++       +  +L +V EY P G L + + +  +   L+       I + L   L  LH
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 466 QECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLTA-GTMGYLAPEYLQYGT 515
              EQ+++HRD+K++NI+L AN   +         L+ +   T  GT  Y+APE  +   
Sbjct: 121 ---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRP 177

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
            + K+D++S G ++ E+A    P E  +    M +L           ++       +   
Sbjct: 178 YSYKSDIWSLGCLLYEMATFAPPFEARS----MQDL---------RYKVQRGKYPPIPPI 224

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
           +++D    L     S        RP+  ++  
Sbjct: 225 YSQD----LQNFIRSMLQVKPKLRPNCDKILA 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 84.7 bits (210), Expect = 4e-18
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 31/201 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA    +G + A+K+ K   E +      L E+ ++  L H N+++LL  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQD-SENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              KG+L LV+E+M     D  LY+   +    L      + +  L   L + H      
Sbjct: 67  FRHKGDLYLVFEFM-----DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS---HG 118

Query: 472 VIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QYGT 515
           ++HRD+K  N++++       A+F  AR   S    +T    T  Y APE L     Y  
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGY-- 176

Query: 516 ATEKTDVFSYGVVVLEVACGR 536
            +   D++S G +  E+   R
Sbjct: 177 -STPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 83.5 bits (206), Expect = 8e-18
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 21/195 (10%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           I+G G FG V +  +  +G   AVK  K     +  FL E +++  L HKNLV+LLG   
Sbjct: 13  IIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQA-FLEETAVMTKLHHKNLVRLLGVIL 69

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
             G L +V E M  G+L   L   +    L+S    L   + +A  + YL     ++++H
Sbjct: 70  HNG-LYIVMELMSKGNLVNFL--RTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVH 123

Query: 475 RDIKASNIMLDANFNARLESSFTL-TAGTMG---------YLAPEYLQYGTATEKTDVFS 524
           RD+ A NI++  +  A++ S F L   G+MG         + APE L++   + K+DV+S
Sbjct: 124 RDLAARNILVSEDGVAKV-SDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWS 182

Query: 525 YGVVVLEV-ACGRRP 538
           YGV++ EV + GR P
Sbjct: 183 YGVLLWEVFSYGRAP 197

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 83.2 bits (205), Expect = 1e-17
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 33/207 (15%)

Query: 355 ILGRGAFGNVYKAYFASSG--SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ L
Sbjct: 2   VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD----SENGV--LLSWYHRLNIVVGL 457
           LG C  +G L L  EY P+G+L       R+L  D      N     LS    L+    +
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A  + YL    ++Q IHRD+ A NI++  N+ A++ + F L+ G       TMG     +
Sbjct: 122 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVRW 177

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T  +DV+SYGV++ E+
Sbjct: 178 MAIESLNYSVYTTNSDVWSYGVLLWEI 204

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 82.8 bits (204), Expect = 1e-17
 Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 20/212 (9%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + LG G FG V+  Y+ +S  VA VK  K        FL E +++  L+H  LV+L    
Sbjct: 12  KKLGAGQFGEVWMGYYNNSTKVA-VKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 70

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  + ++ EYM  GSL   L  D    VLL     ++    +A  + Y+ +   +  I
Sbjct: 71  TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNYI 125

Query: 474 HRDIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKT 520
           HRD++A+N+++        A+F  AR+  ++ +T   G    + + APE + +G+ T K+
Sbjct: 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 185

Query: 521 DVFSYGVVVLE-VACGRRPIERETEGHKMVNL 551
           DV+S+G+++ E V  G+ P    +    M  L
Sbjct: 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL 217

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 36/210 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLA---ELSIIACLRHKNLV 407
           ++LG+GAFG VY  Y   +G   AVK+      S E K E  A   E+ ++  L+H+ +V
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIV 67

Query: 408 QLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           Q  G   +   L +  EYMP GS+ D++    +    +   Y R  I+ G+     YLH 
Sbjct: 68  QYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTR-QILEGVE----YLH- 121

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL------------------ESSFTLTAGTMGYLAP 508
                ++HRDIK +NI+ D+  N +L                    S T   GT  +++P
Sbjct: 122 --SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVT---GTPYWMSP 176

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           E +       K DV+S G  V+E+   + P
Sbjct: 177 EVISGEGYGRKADVWSVGCTVVEMLTEKPP 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 83.2 bits (205), Expect = 2e-17
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 26/197 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-FLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +G++AA K  +   E + E ++ E+ I+A   H  +V+LLG   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
             G+L ++ E+ P G++D ++ +       L+      I   +  AL YLH     ++IH
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVICRQMLEALQYLHS---MKIIH 133

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATE--- 518
           RD+KA N++L  + + +L + F ++A             GT  ++APE +   T  +   
Sbjct: 134 RDLKAGNVLLTLDGDIKL-ADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPY 192

Query: 519 --KTDVFSYGVVVLEVA 533
             K D++S G+ ++E+A
Sbjct: 193 DYKADIWSLGITLIEMA 209

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 82.3 bits (203), Expect = 2e-17
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 35/211 (16%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR------SKHSHEGKTEFL-AELSIIACLRHKNLV 407
           +LG+GA+G VY     + G + AVK+      +  + E + E L  E+ ++  L+H N+V
Sbjct: 7   VLGKGAYGTVYCG-LTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           Q LG C +   + +  E++P GS+  +L +       +   Y +  I+ G+A    YLH 
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK-QILDGVA----YLHN 120

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL----------------ESSFTLTA--GTMGYLAP 508
            C   V+HRDIK +N+ML  N   +L                  S  L +  GT  ++AP
Sbjct: 121 NC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           E +       K+D++S G  V E+A G+ P+
Sbjct: 178 EVINESGYGRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 82.3 bits (203), Expect = 2e-17
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 25/204 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGS---VAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           RILG G FG + +             A+   R+  S + +  FLAE   +    H N+V+
Sbjct: 11  RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVR 70

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G       +++V EYM NG+LD  L +       L     + ++ GLAS + YL    
Sbjct: 71  LEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQ---LVAGQLMGMLPGLASGMKYL---S 124

Query: 469 EQQVIHRDIKASNIMLDANFNA-----------RLESSFTLTAGTMGYL--APEYLQYGT 515
           E   +H+ + A  ++++++              + E+ +T  +G    L  APE +QY  
Sbjct: 125 EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHH 184

Query: 516 ATEKTDVFSYGVVVLEV-ACGRRP 538
            +  +DV+S+G+V+ EV + G RP
Sbjct: 185 FSSASDVWSFGIVMWEVMSYGERP 208

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 82.4 bits (204), Expect = 2e-17
 Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 31/206 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE--FLAEL-SIIACLRHKNLVQLLGW 412
           +GRGAFG V K     SG++ AVKR + + + K +   L +L  ++       +V+  G 
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71

Query: 413 CAEKGELLLVYEYMPNGSLDR--MLYQDSENGVL----LSWYHRLNIVVGLASALTYLHQ 466
              +G+  +  E M + SLD+      +    V+    L       I V    AL YL +
Sbjct: 72  LFREGDCWICMELM-DISLDKFYKYVYEVLKSVIPEEILG-----KIAVATVKALNYLKE 125

Query: 467 ECEQQVIHRDIKASNIMLDANFNAR---------LESSF--TLTAGTMGYLAPEYLQYGT 515
           E   ++IHRD+K SNI+LD N N +         L  S   T  AG   Y+APE +    
Sbjct: 126 EL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 183

Query: 516 ATE---KTDVFSYGVVVLEVACGRRP 538
                 ++DV+S G+ + EVA G+ P
Sbjct: 184 RDGYDVRSDVWSLGITLYEVATGKFP 209

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 82.2 bits (204), Expect = 3e-17
 Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 52/236 (22%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEF-LAELSIIACL-RHK 404
           F   +I+G G+F  V  A    +    A+K         E K ++   E  ++  L  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            +++L     ++  L  V EY PNG L   +    S +     +Y        +  AL Y
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFY-----AAEILLALEY 117

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------------------------- 492
           LH    + +IHRD+K  NI+LD + + ++                               
Sbjct: 118 LHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEK 174

Query: 493 ----ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                +SF    GT  Y++PE L    A + +D+++ G ++ ++  G+ P     E
Sbjct: 175 NRRRFASFV---GTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 81.6 bits (201), Expect = 3e-17
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 21/197 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 73  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 126

Query: 476 DIKASNIMLDANFN--------ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N          ARL  ++ +T   G    + + APE   YG  T K+DV
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 187 WSFGILLTELTTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 82.4 bits (203), Expect = 3e-17
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 34/211 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G       A+K        +   EF+ E  I+A + H +LV
Sbjct: 13  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 72

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN---GVLLSWYHRLNIVVGLASALTYL 464
           +LLG C     + LV + MP+G L   +++  +N    +LL+W       V +A  + YL
Sbjct: 73  RLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 125

Query: 465 HQECEQQVIHRDIKASNIMLDA-------NFN-ARL----ESSFTLTAGTM--GYLAPEY 510
               E++++HRD+ A N+++ +       +F  ARL    E  +    G M   ++A E 
Sbjct: 126 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182

Query: 511 LQYGTATEKTDVFSYGVVVLEVAC-GRRPIE 540
           + Y   T ++DV+SYGV + E+   G +P +
Sbjct: 183 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 81.7 bits (202), Expect = 5e-17
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 32/205 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRH--KNLVQLLG 411
           +G G  G VYK  F  +G V AVK+ + +   E     L +L ++    H    +V+  G
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVV-LKSHDCPYIVKCYG 81

Query: 412 WCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           +     ++ +  E M    LD++L          +L        + V +  AL YL ++ 
Sbjct: 82  YFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILG------KMTVAIVKALHYLKEK- 133

Query: 469 EQQVIHRDIKASNIMLDANFNARL----------ES-SFTLTAGTMGYLAPEYLQYGTAT 517
              VIHRD+K SNI+LDA+ N +L          +S + T +AG   Y+APE +      
Sbjct: 134 -HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPN 192

Query: 518 EK----TDVFSYGVVVLEVACGRRP 538
            K     DV+S G+ ++E+A G+ P
Sbjct: 193 PKYDIRADVWSLGISLVELATGQFP 217

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 80.3 bits (198), Expect = 7e-17
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK 70

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM NG L   L    E+G        L +   +   + YL     +Q IHR
Sbjct: 71  QRPIYIVTEYMSNGCLLNYL---REHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHR 124

Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++D     +          L+  +T + G+   + +  PE L Y   + K+DV
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDV 184

Query: 523 FSYGVVVLEV-ACGRRPIER 541
           +++GV++ EV + G+ P ER
Sbjct: 185 WAFGVLMWEVYSLGKMPYER 204

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 80.0 bits (197), Expect = 1e-16
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +LG+G FG V+K        VA VK  K     E K +FL+E  I+    H N+V+L+G 
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVA-VKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           C ++  + +V E +P G     L +  +    L     +   +  A+ + YL     +  
Sbjct: 61  CTQRQPIYIVMELVPGGDFLSFLRKKKDE---LKTKQLVKFALDAAAGMAYLES---KNC 114

Query: 473 IHRDIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++              SS  L    + + APE L YG  + +
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSE 174

Query: 520 TDVFSYGVVVLE 531
           +DV+SYG+++ E
Sbjct: 175 SDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 33/207 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G GA   VY A    +    A+KR    K       E   E+  ++   H N+V+    
Sbjct: 9   IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVD-ELRKEVQAMSQCNHPNVVKYYTS 67

Query: 413 CAEKGELLLVYEYMPNGS-LDRMLYQDSENG---VLLSWYHRLNIVVGLASALTYLHQEC 468
                EL LV  Y+  GS LD M       G    +++      ++  +   L YLH   
Sbjct: 68  FVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIA-----TVLKEVLKGLEYLHS-- 120

Query: 469 EQQVIHRDIKASNIMLD-------ANF--NARLESSFTLT-------AGTMGYLAPEYLQ 512
               IHRDIKA NI+L        A+F  +A L      T        GT  ++APE ++
Sbjct: 121 -NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179

Query: 513 YGTA-TEKTDVFSYGVVVLEVACGRRP 538
                  K D++S+G+  +E+A G  P
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 27/207 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHK---NLVQL 409
           LGRGA+G V K     +G++ AVKR   + +S E K   L +L I   +R       V  
Sbjct: 9   LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQK-RLLMDLDI--SMRSVDCPYTVTF 65

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G    +G++ +  E M + SLD+   +  + G+ +       I V +  AL YLH +  
Sbjct: 66  YGALFREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL- 123

Query: 470 QQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQYGTATE 518
             VIHRD+K SN++++ N   +L             + T+ AG   Y+APE +      +
Sbjct: 124 -SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 182

Query: 519 ----KTDVFSYGVVVLEVACGRRPIER 541
               K+DV+S G+ ++E+A GR P + 
Sbjct: 183 GYDVKSDVWSLGITMIELATGRFPYDS 209

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 79.1 bits (196), Expect = 3e-16
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 37/205 (18%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQLL 410
            LG G +G VYKA    +G + A+K+ +  +E +       L E+S++  L+H N+V+LL
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLL 64

Query: 411 GWCAEKGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
                + +L LV+EY        LD+     S N +    Y  L         L Y H  
Sbjct: 65  DVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLR-------GLAYCHS- 116

Query: 468 CEQQVIHRDIKASNIMLD-------ANFN-ARL----ESSFTLTAGTMGYLAPEYL---- 511
              +++HRD+K  NI+++       A+F  AR       ++T    T+ Y APE L    
Sbjct: 117 --HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSK 174

Query: 512 QYGTATEKTDVFSYGVVVLEVACGR 536
            Y TA    D++S G +  E+  G+
Sbjct: 175 HYSTA---VDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 29/205 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSV---AAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           LG G+FG V +  +++SG      AVK  +S    +   +FL E +I+  L H+NL++L 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G       L++V E  P GSL   L +D+    L+S     +  V +A+ + YL     +
Sbjct: 63  GVVLTH-PLMMVTELAPLGSLLDRLRKDALGHFLISTLC--DYAVQIANGMRYLES---K 116

Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTAG--------TM--------GYLAPEYLQYG 514
           + IHRD+ A NI+L ++   ++   F L            M         + APE L+  
Sbjct: 117 RFIHRDLAARNILLASDDKVKI-GDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTR 175

Query: 515 TATEKTDVFSYGVVVLEV-ACGRRP 538
           T +  +DV+ +GV + E+   G  P
Sbjct: 176 TFSHASDVWMFGVTLWEMFTYGEEP 200

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 44/266 (16%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRH---KNLVQL 409
           ++GRGA+G VY+     +G V A+K           ++   E+++++ LR     N+ + 
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 410 LGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
            G    KG  L ++ EY   GS+ R L    + G +   Y  + I+  +  AL Y+H+  
Sbjct: 68  YG-SYLKGPRLWIIMEYAEGGSV-RTL---MKAGPIAEKYISV-IIREVLVALKYIHKV- 120

Query: 469 EQQVIHRDIKASNIMLDANFNARL-----ESSFTLT-------AGTMGYLAPEYLQYGTA 516
              VIHRDIKA+NI++    N +L      +             GT  ++APE +  G  
Sbjct: 121 --GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKY 178

Query: 517 TE-KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
            + K D++S G+ + E+A G  P     +  + + L            I ++   RL   
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDV-DAFRAMML------------IPKSKPPRLEDN 225

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPS 601
                ++  +    +C + +   R S
Sbjct: 226 GYSKLLREFV---AACLDEEPKERLS 248

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 21/200 (10%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
            + LG G FG V+ A +     VA VK  K        FLAE +++  L+H  LV+L   
Sbjct: 11  EKKLGAGQFGEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 68

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              K  + ++ E+M  GSL   L  D  +   L     ++    +A  + ++ Q   +  
Sbjct: 69  VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNY 123

Query: 473 IHRDIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD++A+NI++        A+F  AR+  ++ +T   G    + + APE + +G+ T K
Sbjct: 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 183

Query: 520 TDVFSYGVVVLE-VACGRRP 538
           +DV+S+G++++E V  GR P
Sbjct: 184 SDVWSFGILLMEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +G G +G+VYKA   ++G + A+K  K    +       E+S++   RH N+V   G   
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
            + +L +V EY   GSL   +YQ       LS      +       L YLH+      IH
Sbjct: 71  RRDKLWIVMEYCGGGSLQ-DIYQ--VTRGPLSELQIAYVCRETLKGLAYLHE---TGKIH 124

Query: 475 RDIKASNIMLD-------ANF--NARLESSF----TLTAGTMGYLAPEYLQ---YGTATE 518
           RDIK +NI+L        A+F  +A+L ++     +   GT  ++APE       G    
Sbjct: 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-GTPYWMAPEVAAVERKGGYDG 183

Query: 519 KTDVFSYGVVVLEVACGRRP 538
           K D+++ G+  +E+A  + P
Sbjct: 184 KCDIWALGITAIELAELQPP 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 30/206 (14%)

Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+  +      +     AVK      S + +++FL E  I++   H+N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+L+G   E+    ++ E M  G L   L ++    E    L+    L     +A    Y
Sbjct: 72  VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY 131

Query: 464 LHQECEQQVIHRDIKASNIMLD----------ANFN-AR--LESSFTLTAG-TM---GYL 506
           L    E   IHRDI A N +L           A+F  AR    +S+    G  M    ++
Sbjct: 132 LE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTDV+S+GV++ E+
Sbjct: 189 PPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 30/216 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+   +  +  VA VK  K        FL E  I+  LRH  LVQL    +E
Sbjct: 14  LGNGQFGEVWMGTWNGNTKVA-VKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE 72

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L +D E G  L   + +++   +A+ + Y+ +      IHR
Sbjct: 73  E-PIYIVTEYMSKGSLLDFL-KDGE-GRALKLPNLVDMAAQVAAGMAYIER---MNYIHR 126

Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++++NI++        A+F  ARL  ++ +T   G    + + APE   YG  T K+DV
Sbjct: 127 DLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 523 FSYGVVVLE-VACGRRP---------IERETEGHKM 548
           +S+G+++ E V  GR P         +E+   G++M
Sbjct: 187 WSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 222

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 77.2 bits (190), Expect = 2e-15
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT--EFLAELSIIACLRHKNLVQLLGWC 413
           LG+G +G+VYK     +G   A+K  +   +     + + EL I+       +V   G  
Sbjct: 9   LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +G + +  EYM  GSLD++         +     R  I   +   L +L +E    +I
Sbjct: 69  FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLR-RITYAVVKGLKFLKEE--HNII 125

Query: 474 HRDIKASNIMLDAN---------FNARLESSFTLT-AGTMGYLAPEYLQYGTATE----- 518
           HRD+K +N++++ N          +  L +S   T  G   Y+APE ++ G   +     
Sbjct: 126 HRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYT 185

Query: 519 -KTDVFSYGVVVLEVACGRRPIERET 543
            ++DV+S G+ +LE+A GR P   ET
Sbjct: 186 VQSDVWSLGLSILEMALGRYPYPPET 211

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 76.5 bits (189), Expect = 2e-15
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 35/212 (16%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR----HKNLVQLL 410
           ++G G +G VYKA    +G + A+K      + + E   E +I   LR    H N+    
Sbjct: 13  VIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNI---LRKYSNHPNIATFY 69

Query: 411 GWCAEKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           G   +K       +L LV E    GS+  ++    + G  L       I+      L YL
Sbjct: 70  GAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL 129

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYL 511
           H   E +VIHRDIK  NI+L  N   +L   F ++A             GT  ++APE +
Sbjct: 130 H---ENKVIHRDIKGQNILLTKNAEVKL-VDFGVSAQLDSTLGRRNTFIGTPYWMAPEVI 185

Query: 512 ---QYGTAT--EKTDVFSYGVVVLEVACGRRP 538
              +   A+   ++DV+S G+  +E+A G+ P
Sbjct: 186 ACDEQPDASYDARSDVWSLGITAIELADGKPP 217

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 76/292 (26%), Positives = 122/292 (41%), Gaps = 57/292 (19%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSV-AAVK--RSKHSHEGKTEFLAELSIIACLRHKN 405
             LG GAFG VY+          SG +  AVK  R   + + K EFL E  +++   H N
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALT 462
           +V+LLG C       ++ E M  G L   L     +     LL+    L+I + +A    
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMG------------------ 504
           YL Q      IHRD+ A N ++        ++   +  G  G                  
Sbjct: 121 YLEQ---MHFIHRDLAARNCLVSEK---GYDADRVVKIGDFGLARDIYKSDYYRKEGEGL 174

Query: 505 ----YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLY 559
               ++APE L  G  T ++DV+S+GV++ E+   G++P            ++  V    
Sbjct: 175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY----PALNNQEVLQHV---T 227

Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           A GR+ +  +         D++ +L+    +C   D S RP+  R+ +IL N
Sbjct: 228 AGGRLQKPEN-------CPDKIYQLM---TNCWAQDPSERPTFDRIQEILQN 269

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 77.3 bits (190), Expect = 2e-15
 Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 28/210 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGS----VAAVK--RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G       A+K  R   S +   E L E  ++A + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 69  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 124

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    E++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 125 LE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALE 181

Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 182 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 211

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 33/215 (15%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLV 407
           R LG GAFG V+ A            + AVK  K  S   + +F  E  ++  L+H+++V
Sbjct: 11  RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 70

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL---------LSWYHRLNIVVGLA 458
           +  G C E   L++V+EYM +G L++ L     + VL         L+    L+I   +A
Sbjct: 71  KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM---G 504
           + + YL     Q  +HRD+   N ++  N   ++              + +   TM    
Sbjct: 131 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 187

Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++ PE + Y   T ++DV+S GVV+ E+   G++P
Sbjct: 188 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 35/215 (16%)

Query: 356 LGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQL 409
           LG GAFG V+ A            + AVK  K + E  + +F  E  ++  L+H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL-----------LSWYHRLNIVVGLA 458
            G C E   LL+V+EYM +G L+R L     +  +           L+    L I   +A
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132

Query: 459 SALTYLHQECEQQVIHRDIKASNIML---------DANFNARLESS--FTLTAGTM---G 504
           S + YL        +HRD+   N ++         D   +  + S+  + +   TM    
Sbjct: 133 SGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 189

Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++ PE + Y   T ++D++S+GVV+ E+   G++P
Sbjct: 190 WMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 65/225 (28%), Positives = 94/225 (41%), Gaps = 38/225 (16%)

Query: 358 RGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +GAFG+VY A   S+G   A+K  K S        T   AE +I+        V  L + 
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYS 65

Query: 414 AEKGE-LLLVYEYMPNG---SLDRMLYQDSENGVL-LSWYHRLNIVVGLASALTYLHQEC 468
            +  + L LV EY+  G   SL + L      G L   W      +  +   +  LHQ  
Sbjct: 66  FQSKDYLYLVMEYLNGGDCASLIKTL------GGLPEDWAK--QYIAEVVLGVEDLHQ-- 115

Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLT---------AGTMGYLAPEYLQYGTATEK 519
            + +IHRDIK  N+++D   + +L + F L+          GT  YLAPE +      + 
Sbjct: 116 -RGIIHRDIKPENLLIDQTGHLKL-TDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKM 173

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI 564
           +D +S G V+ E   G  P   ET         D V+      RI
Sbjct: 174 SDWWSLGCVIFEFLFGYPPFHAET--------PDAVFDNILSRRI 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 32/205 (15%)

Query: 355 ILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLV 407
            LGRG FG V+ A           ++  VK  + + +    +EF  EL +   L HKN+V
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------LSWYHRLNIVVGLASAL 461
           +LLG C E     ++ EY   G L + L + +++         LS   ++ +   +A  +
Sbjct: 72  RLLGLCREAEPHYMILEYTDLGDLKQFL-RATKSKDEKLKPPPLSTKQKVALCTQIALGM 130

Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT--------------MGYLA 507
            +L      + +HRD+ A N ++ +    ++ S  +L+                 + +LA
Sbjct: 131 DHLSN---ARFVHRDLAARNCLVSSQREVKV-SLLSLSKDVYNSEYYKLRNALIPLRWLA 186

Query: 508 PEYLQYGTATEKTDVFSYGVVVLEV 532
           PE +Q    + K+DV+S+GV++ EV
Sbjct: 187 PEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 76.1 bits (187), Expect = 4e-15
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 29/200 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+K+     + K E +  E+ ++   +H N+V  L    
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDS-ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              EL +V EY+  GSL  ++ +   + G + +      +      AL +LH     QVI
Sbjct: 87  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS---NQVI 137

Query: 474 HRDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYL---QYGTATE 518
           HRDIK+ NI+L         D  F A++   +S  +   GT  ++APE +    YG    
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP--- 194

Query: 519 KTDVFSYGVVVLEVACGRRP 538
           K D++S G++ +E+  G  P
Sbjct: 195 KVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 75.7 bits (186), Expect = 4e-15
 Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 53/289 (18%)

Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           R+LG G FG V    Y      +G + AVK  + +   +  + +  E++I+  L H+N+V
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C+E+G   L L+ EY+P GSL   L +                 + LA  L +  
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK---------------LNLAQLLLFAQ 114

Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLES--SFTLT----AGTMGY------- 505
           Q CE       Q  IHRD+ A N++LD   N RL     F L      G   Y       
Sbjct: 115 QICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 171

Query: 506 -----LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA 560
                 A E L+    +  +DV+S+GV + E+        +++   K   ++    G   
Sbjct: 172 SPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDS--KQSPPKKFEEMIGPKQGQMT 229

Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
             R+IE  ++ +     ++  + + ++  +C   ++  RP+ R +  IL
Sbjct: 230 VVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 75.2 bits (185), Expect = 5e-15
 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 20/202 (9%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           R+LG+GAFG           S+   K    ++ S + + + L E+ I++ L+H N++   
Sbjct: 6   RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               +   LL+  EY   G+L   + +  + G L      L  +  + SA++Y+H+    
Sbjct: 66  NHFMDDNTLLIEMEYANGGTLYDKIVR--QKGQLFEEEMVLWYLFQIVSAVSYIHKA--- 120

Query: 471 QVIHRDIKASNIML---------DANFNARLESSFTLT---AGTMGYLAPEYLQYGTATE 518
            ++HRDIK  NI L         D   +  L S +++     GT  Y++PE  Q      
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNF 180

Query: 519 KTDVFSYGVVVLEVACGRRPIE 540
           K+D+++ G V+ E+   +R  +
Sbjct: 181 KSDIWALGCVLYELLTLKRTFD 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 75.1 bits (184), Expect = 5e-15
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 22/192 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +GRG FG V+     +  +  AVK  R     + K +FL E  I+    H N+V+L+G C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +K  + +V E +  G     L  +   G  L     + +V   A+ + YL  +     I
Sbjct: 63  TQKQPIYIVMELVQGGDFLTFLRTE---GPRLKVKELIQMVENAAAGMEYLESKH---CI 116

Query: 474 HRDIKASNIMLD-------ANFNARLESSFTLTAGTMG-------YLAPEYLQYGTATEK 519
           HRD+ A N ++        ++F    E    + A T G       + APE L YG  + +
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSE 176

Query: 520 TDVFSYGVVVLE 531
           +DV+S+G+++ E
Sbjct: 177 SDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 32/200 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +G +AA K     S E   +++ E+ I+A   H N+V+LL    
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 415 EKGELLLVYEYMPNGSLDRMLYQ----DSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
            +  L ++ E+   G++D ++ +     +E  + +     L        AL YLH   E 
Sbjct: 73  YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLE-------ALNYLH---EN 122

Query: 471 QVIHRDIKASNIMLD-------ANFNARLESSFTLT-----AGTMGYLAPEYLQYGTATE 518
           ++IHRD+KA NI+         A+F    +++ T+       GT  ++APE +   T+ +
Sbjct: 123 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 182

Query: 519 -----KTDVFSYGVVVLEVA 533
                K DV+S G+ ++E+A
Sbjct: 183 RPYDYKADVWSLGITLIEMA 202

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 74.8 bits (184), Expect = 7e-15
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 25/198 (12%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVA---AVKRSKHSHEG--KTEFLAELSIIACLRHKNLV 407
            R +G G FG+VY+  + S  +     AVK  K+      + +FL E  I+    H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L+G   E   + +V E  P G L   L  +  +  L S    +     L++AL YL   
Sbjct: 71  KLIGVITEN-PVWIVMELAPLGELRSYLQVNKYSLDLASL---ILYSYQLSTALAYLES- 125

Query: 468 CEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYLQYG 514
             ++ +HRDI A N+++ +    +L           ES +  + G +   ++APE + + 
Sbjct: 126 --KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFR 183

Query: 515 TATEKTDVFSYGVVVLEV 532
             T  +DV+ +GV + E+
Sbjct: 184 RFTSASDVWMFGVCMWEI 201

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 75.2 bits (185), Expect = 7e-15
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 47/211 (22%)

Query: 354 RILGRGAFGNVYKAY---FASSGSVAAV-----KRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A     + S +V  V     K + HS E +   ++EL I++ L  H+
Sbjct: 41  KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSE-REALMSELKIMSHLGNHE 99

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           N+V LLG C   G +L++ EY   G L   L +  E    L+    L+    +A  + +L
Sbjct: 100 NIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFL 157

Query: 465 HQECEQQVIHRDIKASN-------------------IMLDANF----NARLESSFTLTAG 501
                +  IHRD+ A N                   IM D+N+    NARL         
Sbjct: 158 ---ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARL--------- 205

Query: 502 TMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            + ++APE +     T ++DV+SYG+++ E+
Sbjct: 206 PVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 74.5 bits (183), Expect = 1e-14
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 48/221 (21%)

Query: 354 RILGRGAFGNVYKAYFASSGSV-------AAVKRSKH--SHEGKTEFLAELSIIACLRHK 404
           R +G+GAFG V++A   + G +        AVK  K   S + + +F  E +++A   H 
Sbjct: 11  RDIGQGAFGRVFQA--RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHP 68

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDS------------------ENGVLLS 446
           N+V+LLG CA    + L++EYM  G L+  L   S                   N + LS
Sbjct: 69  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLS 128

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
              +L I   +A+ + YL    E++ +HRD+   N ++  N   ++ + F L+       
Sbjct: 129 CTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKI-ADFGLSRNIYSAD 184

Query: 500 --------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
                   A  + ++ PE + Y   T ++DV++YGVV+ E+
Sbjct: 185 YYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)

Query: 354 RILGRGAFGNVYKA--YFASSGS---VAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLV 407
           R LG GAFG V+ A  Y  S      + AVK  K      + +F  E  ++  L+H+++V
Sbjct: 11  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 70

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRLNIVV 455
           +  G C +   L++V+EYM +G L++ L     + ++            L     L+I  
Sbjct: 71  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAG-TM- 503
            +AS + YL     Q  +HRD+   N ++ AN   ++           + +    G TM 
Sbjct: 131 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 187

Query: 504 --GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
              ++ PE + Y   T ++DV+S+GV++ E+   G++P
Sbjct: 188 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 74.5 bits (183), Expect = 1e-14
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 26/207 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G FG V      ++G + A K     R K   +G+   L E  I+  +  + +V L 
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLA 59

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS--WYHRLNIVVGLASALTYLHQEC 468
                K +L LV   M  G L   +Y   E G   +   ++   I+ GL     +LHQ  
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGL----EHLHQR- 114

Query: 469 EQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQYGTAT 517
             ++++RD+K  N++LD + N R+                  AGT GY+APE LQ     
Sbjct: 115 --RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYD 172

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETE 544
              D F+ G  + E+  GR P  +  E
Sbjct: 173 FSVDWFALGCTLYEMIAGRSPFRQRKE 199

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 35/276 (12%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKN 405
           F   + +GRG F  VY+A         A+K+ +       + + + + E+ ++  L H N
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++ L    E  EL +V E    G L +M+    +   L+         V L SA+ ++H
Sbjct: 64  VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE--------SSFTLTA----GTMGYLAPEYLQY 513
               ++V+HRDIK +N+ + A    +L         SS T  A    GT  Y++PE +  
Sbjct: 124 S---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 180

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD-KRL 572
                K+D++S G ++ E+A  + P      G KM         L++  + IE  D   L
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAALQSPF----YGDKM--------NLFSLCQKIEQCDYPPL 228

Query: 573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
                 ++++ L+ +   C  PD   RP +  V QI
Sbjct: 229 PTEHYSEKLRELVSM---CIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 73.6 bits (180), Expect = 2e-14
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLA---ELSIIACLRHKNLV 407
           ++LG+GAFG VY  Y   +G   A K+ +    S E   E  A   E+ ++  L+H+ +V
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV 67

Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           Q  G   ++ E  L +  EYMP GS+   L      G L     R      +   ++YLH
Sbjct: 68  QYYGCLRDRAEKTLTIFMEYMPGGSVKDQL---KAYGALTESVTR-KYTRQILEGMSYLH 123

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEY 510
                 ++HRDIK +NI+ D+  N +L                +      GT  +++PE 
Sbjct: 124 S---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV 180

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           +       K DV+S G  V+E+   + P
Sbjct: 181 ISGEGYGRKADVWSLGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 41/221 (18%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A   S+G   AVK+     + + E L  E+ I+   +H N+V++     
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL 86

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTYLHQEC 468
              EL +V E++  G+L  ++              R+N      + + +  AL++LH   
Sbjct: 87  VGDELWVVMEFLEGGALTDIVTHT-----------RMNEEQIATVCLAVLKALSFLHA-- 133

Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEY---LQ 512
            Q VIHRDIK+ +I+L ++   +L S F   A             GT  ++APE    L 
Sbjct: 134 -QGVIHRDIKSDSILLTSDGRVKL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP 191

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           YGT   + D++S G++V+E+  G  P   E     M  + D
Sbjct: 192 YGT---EVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD 229

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 28/200 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG G  G+V K     +G+V A K+  H       + + L EL I+   R   +V   G 
Sbjct: 13  LGAGNGGSVSKVKHIPTGTVMA-KKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGA 71

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA----LTYLHQEC 468
              +  + +  E+M  GSLDR+     + G +      + I+  +A A    LTYL+   
Sbjct: 72  FLNENNICMCMEFMDCGSLDRIY---KKGGPI-----PVEILGKIAVAVVEGLTYLYNV- 122

Query: 469 EQQVIHRDIKASNIML---------DANFNARLESSFTLT-AGTMGYLAPEYLQYGTATE 518
             +++HRDIK SNI++         D   +  L +S   T  GT  Y++PE +Q G  T 
Sbjct: 123 -HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTV 181

Query: 519 KTDVFSYGVVVLEVACGRRP 538
           K+DV+S G+ ++E+A G+ P
Sbjct: 182 KSDVWSLGISIIELALGKFP 201

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 73.5 bits (181), Expect = 2e-14
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 34/209 (16%)

Query: 354 RILGRGAFGNVYKAYFA--SSGSV---AAVK---RSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY+        G      A+K    +    E + EFL E S++      +
Sbjct: 12  RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE-RIEFLNEASVMKEFNCHH 70

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLLSWYHR---LNIVVGLAS 459
           +V+LLG  +     L+V E M  G L    R    ++EN   L        + +   +A 
Sbjct: 71  VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD 130

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMGYL--- 506
            + YL     ++ +HRD+ A N M+  +   ++   F +T           G  G L   
Sbjct: 131 GMAYLA---AKKFVHRDLAARNCMVAEDLTVKI-GDFGMTRDIYETDYYRKGGKGLLPVR 186

Query: 507 --APEYLQYGTATEKTDVFSYGVVVLEVA 533
             APE L+ G  T K+DV+S+GVV+ E+A
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMA 215

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 32/209 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLA---ELSIIACLRHKNLV 407
           ++LGRGAFG VY  Y A +G   AVK+      S E   E  A   E+ ++  LRH  +V
Sbjct: 8   KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV 67

Query: 408 QLLGWC---AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           Q  G C    E+ +L +  EYMP GS+   L      G L     R      +   ++YL
Sbjct: 68  QYYG-CLRDPEEKKLSIFVEYMPGGSIKDQL---KAYGALTENVTR-RYTRQILQGVSYL 122

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPE 509
           H      ++HRDIK +NI+ D+  N +L                +      GT  +++PE
Sbjct: 123 HS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179

Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRP 538
            +       K DV+S    V+E+   + P
Sbjct: 180 VISGEGYGRKADVWSVACTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 73.0 bits (180), Expect = 4e-14
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 25/198 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--EL-SIIACLRHKNLVQLLGW 412
           LG G FG+VY A    +G + A+K+ K       E +   E+ S+     H N+V+L   
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEV 66

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQ--DSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
             E  EL  V+EYM     +  LYQ      G   S     +I+  +   L ++H+    
Sbjct: 67  FRENDELYFVFEYM-----EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---H 118

Query: 471 QVIHRDIKASNIMLDANFN--------AR-LESSFTLTA--GTMGYLAPE-YLQYGTATE 518
              HRD+K  N+++             AR + S    T    T  Y APE  L+  + + 
Sbjct: 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSS 178

Query: 519 KTDVFSYGVVVLEVACGR 536
             D+++ G ++ E+   R
Sbjct: 179 PVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 72.4 bits (177), Expect = 4e-14
 Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 30/216 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  I+  LRH  LV L    +E
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVA-IKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE 72

Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V E+M  GSL   L +   +G  L     +++   +A  + Y+ +      IHR
Sbjct: 73  E-PIYIVTEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHR 126

Query: 476 DIKASNIMLDANFN--------ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N          ARL  ++ +T   G    + + APE   YG  T K+DV
Sbjct: 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 523 FSYGVVVLE-VACGRRP---------IERETEGHKM 548
           +S+G+++ E V  GR P         +E+   G++M
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM 222

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 31/208 (14%)

Query: 354 RILGRGAFGNVYKAYF----ASSGSVA--AVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +ILG G FG+V +        S   VA   +K   H++    EFL+E + +    H N++
Sbjct: 5   KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVM 64

Query: 408 QLLGWCAEKGEL------LLVYEYMPNGSLDRMLYQD--SENGVLLSWYHRLNIVVGLAS 459
           +L+G C E   L      +++  +M +G L   L           L     L  +V +A 
Sbjct: 65  KLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL 124

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESSFTLTAGT-----------MGY 505
            + YL     +  IHRD+ A N ML  +     A    S  + +G            + +
Sbjct: 125 GMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 181

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +A E L     T K+DV+++GV + E+A
Sbjct: 182 IAIESLADRVYTSKSDVWAFGVTMWEIA 209

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 72.2 bits (177), Expect = 5e-14
 Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 55/285 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA---ELSIIACLRHKNLVQLL 410
           R++GRGAFG V+     +   +  +K+       K E LA   E  ++  L H N+++  
Sbjct: 6   RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               E   L++V EY P G+L   + Q   N  LL     L+  V +  AL ++H    +
Sbjct: 66  ENFLEDKALMIVMEYAPGGTLAEYI-QKRCNS-LLDEDTILHFFVQILLALHHVHT---K 120

Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT------------AGTMGYLAPEYLQYGTATE 518
            ++HRD+K  NI+LD +        F ++             GT  Y++PE  +     +
Sbjct: 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQ 180

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN- 577
           K+D+++ G V+ E+A     ++R  E   +  LV                 K ++G F  
Sbjct: 181 KSDIWALGCVLYELA----SLKRAFEAANLPALV----------------LKIMSGTFAP 220

Query: 578 -----EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV 617
                  ++++L+   LS  N D S RP +    QI+   A+P+ 
Sbjct: 221 ISDRYSPDLRQLI---LSMLNLDPSKRPQLS---QIM---AQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 72.4 bits (178), Expect = 5e-14
 Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 31/200 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGW 412
           +G G++G V+K     +G + A+K+   S +    K   L E+ ++  L+H NLV L+  
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              K +L LV+EY  +  L+ +  + +  GV    +    I+     A+ + H+      
Sbjct: 69  FRRKRKLHLVFEYCDHTVLNEL--EKNPRGV--PEHLIKKIIWQTLQAVNFCHK---HNC 121

Query: 473 IHRDIKASNIML---------DANFNARL----ESSFTLTAGTMGYLAPEYL----QYGT 515
           IHRD+K  NI++         D  F AR+       +T    T  Y APE L    QYG 
Sbjct: 122 IHRDVKPENILITKQGQIKLCDFGF-ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGP 180

Query: 516 ATEKTDVFSYGVVVLEVACG 535
                DV++ G V  E+  G
Sbjct: 181 P---VDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 71.8 bits (176), Expect = 5e-14
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 25/206 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA--AVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG G FG V+   + +   VA  A+     S E   +F+ E  ++  L H  LVQL G
Sbjct: 10  KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEE---DFIEEAKVMMKLSHPKLVQLYG 66

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C ++  L +V E+M NG L   L Q    G  LS    L++   +   + YL +     
Sbjct: 67  VCTQQKPLYIVTEFMENGCLLNYLRQ--RQGK-LSKDMLLSMCQDVCEGMEYLER---NS 120

Query: 472 VIHRDIKASNIMLDA-------NFN-AR--LESSFTLTAGT---MGYLAPEYLQYGTATE 518
            IHRD+ A N ++ +       +F   R  L+  +T ++G    + +  PE   +   + 
Sbjct: 121 FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSS 180

Query: 519 KTDVFSYGVVVLEVAC-GRRPIERET 543
           K+DV+S+GV++ EV   G+ P E+++
Sbjct: 181 KSDVWSFGVLMWEVFTEGKMPFEKKS 206

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 45/217 (20%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQL- 409
            +G G +G VYKA    +G + A+K+ +  +E K  F    + E+ I+  L H+N+V L 
Sbjct: 14  QIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLK 72

Query: 410 ---------LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLAS 459
                    L +  +KG   LV+EYM     D  L    E+G V  S  H  + +  L  
Sbjct: 73  EIVTDKQDALDFKKDKGAFYLVFEYM-----DHDLMGLLESGLVHFSEDHIKSFMKQLLE 127

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLD-------ANFN-ARLESS-----FTLTAGTMGYL 506
            L Y H+   +  +HRDIK SNI+L+       A+F  ARL +S     +T    T+ Y 
Sbjct: 128 GLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYR 184

Query: 507 APEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            PE L    +YG A    DV+S G ++ E+   ++PI
Sbjct: 185 PPELLLGEERYGPA---IDVWSCGCILGELFT-KKPI 217

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 64/203 (31%), Positives = 90/203 (44%), Gaps = 29/203 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  LRH N ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY 80

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV---GLASALTYLHQ 466
            G    +    LV EY   GS   +L       V       + I     G    L YLH 
Sbjct: 81  KGCYLREHTAWLVMEYCL-GSASDIL------EVHKKPLQEVEIAAICHGALQGLAYLHS 133

Query: 467 ECEQQVIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQYGT 515
                 IHRDIKA NI+L        A+F +A L S      GT  ++APE    +  G 
Sbjct: 134 HER---IHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQ 190

Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
              K DV+S G+  +E+A  R+P
Sbjct: 191 YDGKVDVWSLGITCIELA-ERKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 72.2 bits (177), Expect = 1e-13
 Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 33/219 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           F    ++GRG FG V      ++G + A+K  K S     E    F  E  I++      
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTY 463
           + QL     +K  L LV EY P G L  +L  Y+D  +  +  +Y        LA  +  
Sbjct: 63  IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFY--------LAELVLA 114

Query: 464 LHQECEQQVIHRDIKASNIMLD-------ANFN--ARLESSFTLTA----GTMGYLAPEY 510
           +H   +   +HRDIK  N+++D       A+F   ARL ++  + +    GT  Y+APE 
Sbjct: 115 IHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEV 174

Query: 511 LQ----YGTATE--KTDVFSYGVVVLEVACGRRPIERET 543
           L      G  T   + D +S GV+  E+  GR P    T
Sbjct: 175 LTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 65/256 (25%)

Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIAC 400
           S  R +     LG G FG VYKA    +G V A+K+    +E K  F    L E+ I+  
Sbjct: 5   SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKK 63

Query: 401 LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDR------MLYQDSE-NGVL------LSW 447
           L+H N+V L+          +  E        R        Y D + +G+L      L+ 
Sbjct: 64  LKHPNVVPLID---------MAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTE 114

Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-------ANFN-ARL------- 492
                 ++ L   + YLH   E  ++HRDIKA+NI++D       A+F  AR        
Sbjct: 115 SQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPN 171

Query: 493 --------ESSFTLTAGTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI- 539
                      +T    T  Y  PE L    +Y TA    D++  G V  E+   RRPI 
Sbjct: 172 PKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTA---VDIWGIGCVFAEMF-TRRPIL 227

Query: 540 ERETE---GHKMVNLV 552
           + +++    H +  L 
Sbjct: 228 QGKSDIDQLHLIFKLC 243

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 71/288 (24%), Positives = 115/288 (39%), Gaps = 64/288 (22%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK----------HSHEGKTEFLAELSIIACLRHKN 405
           LG+G F N+YK        +  V   +            H     F    S+++ L HK+
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L G C    E ++V EY+  G LD  L    +N V L W  +L++   LASAL YL 
Sbjct: 63  LVKLYGVCVRD-ENIMVEEYVKFGPLDVFL-HREKNNVSLHW--KLDVAKQLASALHYLE 118

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESS-------------FTLTAGTMGY------- 505
              +++++H ++   NI++     AR   +               +T  +          
Sbjct: 119 ---DKKLVHGNVCGKNILV-----ARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPW 170

Query: 506 LAPEYLQYGTA--TEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEG 562
           +APE ++ G A  T   D +S+G  +LE+   G  P+   +   K           Y + 
Sbjct: 171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER--------FYQDQ 222

Query: 563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
             +   D          E+  L+     C   D + RPS R + + LN
Sbjct: 223 HRLPMPD--------CAELANLI---NQCWTYDPTKRPSFRAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 24/212 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G+FG          G    +K    SK S + + E   E+++++ ++H N+VQ    
Sbjct: 8   IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQES 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E G L +V +Y   G L + +  +++ GVL      L+  V +  AL ++H   ++++
Sbjct: 68  FEENGNLYIVMDYCEGGDLYKKI--NAQRGVLFPEDQILDWFVQICLALKHVH---DRKI 122

Query: 473 IHRDIKASNIML---------DANFNARLESSFTLT---AGTMGYLAPEYLQYGTATEKT 520
           +HRDIK+ NI L         D      L S+  L     GT  YL+PE  +      K+
Sbjct: 123 LHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKS 182

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           D+++ G V+ E+      ++   E   M NLV
Sbjct: 183 DIWALGCVLYEMCT----LKHAFEAGNMKNLV 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 70.3 bits (173), Expect = 3e-13
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 33/206 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLA--ELSIIACLRHKNLVQL 409
           LG G +  VYKA    +G + A+K+ K     + +    F A  E+ ++  L+H N++ L
Sbjct: 8   LGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGL 67

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           L     K  + LV+E+M    L   + +D    ++L+     + ++     L YLH    
Sbjct: 68  LDVFGHKSNINLVFEFME-TDL-EKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH---S 120

Query: 470 QQVIHRDIKASNIMLDAN-------FN-ARLESS----FTLTAGTMGYLAPEYL----QY 513
             ++HRD+K +N+++ ++       F  AR   S     T    T  Y APE L     Y
Sbjct: 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHY 180

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
           G      D++S G +  E+   R P 
Sbjct: 181 GVG---VDMWSVGCIFAEL-LLRVPF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 43/223 (19%)

Query: 356 LGRGAFGNVY--------------KAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIA 399
           LG G FG V+                 F     + AVK  R+  +   + +FL E+ I++
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72

Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ--------DSENGVLLSWYHRL 451
            L++ N+++LLG C     L ++ EYM NG L++ L Q         + N   +S  + L
Sbjct: 73  RLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLL 132

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---SFTLTAGT------ 502
            + V +AS + YL        +HRD+   N ++  ++  ++     S  L +G       
Sbjct: 133 YMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQG 189

Query: 503 -----MGYLAPEYLQYGTATEKTDVFSYGVVVLEV--ACGRRP 538
                + ++A E +  G  T  +DV+++GV + E+   C  +P
Sbjct: 190 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 70.1 bits (171), Expect = 4e-13
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G V+ A   ++G   A+K+     + K E +  E+ ++  L++ N+V  L    
Sbjct: 27  IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 87  VGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECL-----QALEFLHA---NQVIH 138

Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ N++L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 198

Query: 523 FSYGVVVLEVACGRRPIERE 542
           +S G++ +E+  G  P   E
Sbjct: 199 WSLGIMAIEMVEGEPPYLNE 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 71.0 bits (174), Expect = 4e-13
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 40/209 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQLLG 411
             +G GA G VYK     +G + A+K    +HE   + +   E+ I+  + H N+V+   
Sbjct: 80  NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHD 139

Query: 412 WCAEKGELLLVYEYMPNGSLD-RMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                GE+ ++ E+M  GSL+   +  +      L+   R  I+ G+A    YLH+   +
Sbjct: 140 MFDHNGEIQVLLEFMDGGSLEGTHIADEQF----LADVAR-QILSGIA----YLHR---R 187

Query: 471 QVIHRDIKASNIMLDANFNARLESSFTL-------------TAGTMGYLAPEYLQY---- 513
            ++HRDIK SN+++++  N ++ + F +             + GT+ Y++PE +      
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKI-ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNH 246

Query: 514 ----GTATEKTDVFSYGVVVLEVACGRRP 538
               G A    D++S GV +LE   GR P
Sbjct: 247 GAYDGYA---GDIWSLGVSILEFYLGRFP 272

Length = 353

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 70.0 bits (171), Expect = 4e-13
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 27/199 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSV----AAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG G FG V+K  +   G       A+K  + +   +   E    +  +  L H  +V
Sbjct: 13  KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C     L LV +  P GSL   + Q  ++   L     LN  V +A  + YL   
Sbjct: 73  RLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDS---LDPQRLLNWCVQIAKGMYYLE-- 126

Query: 468 CEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQY 513
            E +++HR++ A NI+L ++   ++              +  ++     + ++A E + +
Sbjct: 127 -EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF 185

Query: 514 GTATEKTDVFSYGVVVLEV 532
           G  T ++DV+SYGV V E+
Sbjct: 186 GRYTHQSDVWSYGVTVWEM 204

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 69.6 bits (170), Expect = 5e-13
 Identities = 68/284 (23%), Positives = 125/284 (44%), Gaps = 54/284 (19%)

Query: 356 LGRGAFGNVYKAYFASSG----SVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQL 409
           LG  AFG +YK +    G     + A+K  K  ++ +   EF  E S++A L H N+V L
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDS----------ENGVLLSWYHR---LNIVVG 456
           LG   ++  + +++EY+  G L   L   S          E+G + S       L+I + 
Sbjct: 73  LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQ 132

Query: 457 LASALTYLHQECEQQVIHRDIKASNIML---------DANFNARLESS--FTLTAGTM-- 503
           +A+ + YL        +H+D+ A NI++         D   +  + S+  + +   ++  
Sbjct: 133 IAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLP 189

Query: 504 -GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAE 561
             ++ PE + YG  +  +D++S+GVV+ E+ + G +P                 +G ++ 
Sbjct: 190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP----------------YYG-FSN 232

Query: 562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRV 605
             +IE   KR     +ED   R+  +   C     S RP  + +
Sbjct: 233 QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 69.7 bits (171), Expect = 5e-13
 Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 29/200 (14%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           ++G G++G V K     +G + A+K+   S+     K   + E+ ++  LRH+NLV L+ 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               K  L LV+E++ +  LD +  +   NG+  S   +   +  +   + + H      
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLDDL--EKYPNGLDESRVRK--YLFQILRGIEFCHS---HN 120

Query: 472 VIHRDIKASNIML---------DANFNARLES---SFTLTAGTMGYLAPEYL----QYGT 515
           +IHRDIK  NI++         D  F   L +    +T    T  Y APE L    +YG 
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGR 180

Query: 516 ATEKTDVFSYGVVVLEVACG 535
           A    D+++ G +V E+  G
Sbjct: 181 A---VDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 70.1 bits (171), Expect = 5e-13
 Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +G G+FG VY A  + +  V AVK+     K ++E   + + E+  +  L+H N ++  G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              ++    LV EY    + D +          L       I  G    L YLH      
Sbjct: 89  CYLKEHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAITHGALQGLAYLHSHN--- 141

Query: 472 VIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQYGTATEKT 520
           +IHRDIKA NI+L        A+F +A   S      GT  ++APE    +  G    K 
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKV 201

Query: 521 DVFSYGVVVLEVACGRRP 538
           DV+S G+  +E+A  R+P
Sbjct: 202 DVWSLGITCIELA-ERKP 218

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 69.4 bits (170), Expect = 6e-13
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 44/207 (21%)

Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGKTE-FLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G V AVK+ +HS       F  E+ I+  L+H N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 411 GWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G C   G   L LV EY+P GSL   L +            RL+        L Y  Q C
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR---------ERLD----HRKLLLYASQIC 118

Query: 469 -------EQQVIHRDIKASNIMLDANFNARLESSFTLTA----------------GTMGY 505
                   ++ +HRD+   NI++++    ++   F LT                   + +
Sbjct: 119 KGMEYLGSKRYVHRDLATRNILVESENRVKI-GDFGLTKVLPQDKEYYKVREPGESPIFW 177

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
            APE L     +  +DV+S+GVV+ E+
Sbjct: 178 YAPESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 69.1 bits (169), Expect = 6e-13
 Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 29/199 (14%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           ILG G  G VYKAY   +  + AVK      + E + + ++EL I+       ++   G 
Sbjct: 8   ILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGA 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              +  + +  E+M  GSLD  +Y+     VL        I V +   LTYL      ++
Sbjct: 68  FFVENRISICTEFMDGGSLD--VYRKIPEHVL------GRIAVAVVKGLTYLWS---LKI 116

Query: 473 IHRDIKASNIML---------DANFNARLESSFTLT-AGTMGYLAPEYL---QYGTATEK 519
           +HRD+K SN+++         D   + +L +S   T  GT  Y+APE +   QYG     
Sbjct: 117 LHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGI---H 173

Query: 520 TDVFSYGVVVLEVACGRRP 538
           +DV+S G+  +E+A GR P
Sbjct: 174 SDVWSLGISFMELALGRFP 192

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTE--FLAELSIIACLRHKNLVQLLG 411
           LG G FG V      S     A+K  K  H  E   +    +E  I+    H  +V+L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              +K  + ++ EY   G L  +L    + G L   Y     +  +  A  YLH    + 
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILR---DRG-LFDEYTARFYIACVVLAFEYLH---NRG 113

Query: 472 VIHRDIKASNIMLDAN---------FNARLES---SFTLTAGTMGYLAPEYLQ---YGTA 516
           +I+RD+K  N++LD+N         F  +L+S   ++T   GT  Y+APE +    Y  +
Sbjct: 114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF-CGTPEYVAPEIILNKGYDFS 172

Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
               D +S G+++ E+  GR P
Sbjct: 173 ---VDYWSLGILLYELLTGRPP 191

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 69.5 bits (171), Expect = 8e-13
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 41/214 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           + +G GA+G V  A    +G   A+K+         + K   L E+ ++  LRH+N++ L
Sbjct: 6   KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAK-RILREIKLLRHLRHENIIGL 64

Query: 410 L-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L         +  ++ +V E M    L +++         L+  H    +  +   L YL
Sbjct: 65  LDILRPPSPEDFNDVYIVTELMET-DLHKVIKS----PQPLTDDHIQYFLYQILRGLKYL 119

Query: 465 HQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSFTLTAGTMG-------YLAPE 509
           H      VIHRD+K SNI++++N       F  AR         G +        Y APE
Sbjct: 120 H---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPE 176

Query: 510 YL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            L    +Y  A    D++S G +  E+   R+P+
Sbjct: 177 LLLSSSRYTKA---IDIWSVGCIFAELL-TRKPL 206

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 68.8 bits (168), Expect = 8e-13
 Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 20/204 (9%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLG 411
           LG+G FG V      ++G + A K+          G+   L E  I+  +    +V L  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               K  L LV   M  G L   +Y   E G+ +     ++    +   + +LH      
Sbjct: 61  AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEME--RVIHYSAQITCGILHLH---SMD 115

Query: 472 VIHRDIKASNIMLDANFNARLE-----------SSFTLTAGTMGYLAPEYLQYGTATEKT 520
           +++RD+K  N++LD   N RL             + T  AGT GY+APE L+    +   
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPV 175

Query: 521 DVFSYGVVVLEVACGRRPIERETE 544
           D F+ G  + E+  GR P +   E
Sbjct: 176 DWFAMGCSIYEMVAGRTPFKDHKE 199

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 68.9 bits (168), Expect = 8e-13
 Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 44/216 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGS-----VA-AVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G      VA  V R   S +   E L E  ++A +    + 
Sbjct: 13  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVC 72

Query: 408 QLLGWCAEKGELLLVYEYMPNGSL--------DRMLYQDSENGVLLSWYHRLNIVVGLAS 459
           +LLG C     + LV + MP G L        DR+  QD     LL+W       V +A 
Sbjct: 73  RLLGICL-TSTVQLVTQLMPYGCLLDYVRENKDRIGSQD-----LLNW------CVQIAK 120

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDA-------NFN-ARL----ESSFTLTAGT--MGY 505
            ++YL    E +++HRD+ A N+++ +       +F  ARL    E+ +    G   + +
Sbjct: 121 GMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 177

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIE 540
           +A E + +   T ++DV+SYGV V E+   G +P +
Sbjct: 178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 69.5 bits (170), Expect = 9e-13
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 36/214 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTE-FLAELSIIACLR-HKNLVQ 408
           R+LG+G+FG V  A    SG + AVK  K      +   E  + E  I++  R H  L Q
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L         L  V E++  G L   + +        + ++   I     SAL +LH   
Sbjct: 61  LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIT----SALMFLH--- 113

Query: 469 EQQVIHRDIKASNIMLD-------ANF--------NARLESSFTLTAGTMGYLAPEYLQ- 512
           ++ +I+RD+K  N++LD       A+F        N +  S+F    GT  Y+APE LQ 
Sbjct: 114 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF---CGTPDYIAPEILQE 170

Query: 513 --YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
             YG +    D ++ GV++ E+ CG  P E E E
Sbjct: 171 MLYGPSV---DWWAMGVLLYEMLCGHAPFEAENE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 68.7 bits (168), Expect = 9e-13
 Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 27/209 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-------SKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG+G FG V      ++G + A K+        +  +EG    + E  I+A +  + +V 
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGA---MVEKRILAKVHSRFIVS 57

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +L LV   M  G L   +Y   E                + S L +LHQ  
Sbjct: 58  LAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-- 115

Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGT 515
            +++I+RD+K  N++LD + N R+ S   L              AGT G++APE LQ   
Sbjct: 116 -RRIIYRDLKPENVLLDNDGNVRI-SDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE 173

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETE 544
                D F+ GV + E+   R P     E
Sbjct: 174 YDFSVDYFALGVTLYEMIAARGPFRARGE 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 30/196 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR--SKHSHEG-KTEFLAELSIIACLRHKNLVQLLGW 412
           +G GA G V+KA    +G   A+K+   +    G   + L E+  +   +H  +V+LL  
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                  +LV EYMP   L  +L +D E  +  +       +  L   + Y+H      +
Sbjct: 68  FPHGSGFVLVMEYMP-SDLSEVL-RDEERPLPEAQVKSYMRM--LLKGVAYMHAN---GI 120

Query: 473 IHRDIKASNIMLDAN-------------FNARLESSFTLTAGTMGYLAPEYL----QYGT 515
           +HRD+K +N+++ A+             F+      ++    T  Y APE L    +Y  
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDP 180

Query: 516 ATEKTDVFSYGVVVLE 531
                D+++ G +  E
Sbjct: 181 G---VDLWAVGCIFAE 193

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLA---ELSIIACLRHKNLV 407
           ++LG+GAFG VY  Y A +G   AVK+ +    S E   E  A   E+ ++  L H+ +V
Sbjct: 8   KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV 67

Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           Q  G   +  E  L +  E+MP GS+   L      G L     R      +   ++YLH
Sbjct: 68  QYYGCLRDPMERTLSIFMEHMPGGSIKDQL---KSYGALTENVTR-KYTRQILEGVSYLH 123

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEY 510
                 ++HRDIK +NI+ D+  N +L                +      GT  +++PE 
Sbjct: 124 S---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEV 180

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           +       K D++S G  V+E+   + P
Sbjct: 181 ISGEGYGRKADIWSVGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 21/196 (10%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA---ELSIIACLRHKNLVQLL 410
           R++G+G++G V      + G    +K+    +  + E  A   E  +++ L+H N+V   
Sbjct: 6   RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYR 65

Query: 411 -GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             W  E G L +V  +   G L   L +  + G LL     +   V +A AL YLH   E
Sbjct: 66  ESWEGEDGLLYIVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIAMALQYLH---E 120

Query: 470 QQVIHRDIKASNIML---------DANFNARLESSFTLTA---GTMGYLAPEYLQYGTAT 517
           + ++HRD+K  N+ L         D      LE+   + +   GT  Y++PE        
Sbjct: 121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYN 180

Query: 518 EKTDVFSYGVVVLEVA 533
            K+DV++ G  V E+A
Sbjct: 181 YKSDVWALGCCVYEMA 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 54/286 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSV---AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R++G+G FG VY      S       AVK        E   +FL E  I+    H N++ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 409 LLGWC-AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL--ASALTYLH 465
           LLG C   +G  L+V  YM +G L   +  ++ N  +        I  GL  A  + YL 
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDL-----IGFGLQVAKGMEYL- 114

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTL---------------TAGTM--GYLAP 508
               ++ +HRD+ A N MLD +F  ++ + F L               T   +   ++A 
Sbjct: 115 --ASKKFVHRDLAARNCMLDESFTVKV-ADFGLARDIYDKEYYSVHNHTGAKLPVKWMAL 171

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA 568
           E LQ    T K+DV+S+GV++ E+     P   + +   +   +        +GR     
Sbjct: 172 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL-------LQGR----- 219

Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS----MRRVFQILN 610
            + L   +  D +  ++   LSC +P    RP+    + R+ QI +
Sbjct: 220 -RLLQPEYCPDPLYEVM---LSCWHPKPEMRPTFSELVSRIEQIFS 261

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 68.6 bits (167), Expect = 1e-12
 Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+K+     + K E +  E+ ++   ++ N+V  L    
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 87  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALDFLHS---NQVIH 138

Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 198

Query: 523 FSYGVVVLEVACGRRPIERE 542
           +S G++ +E+  G  P   E
Sbjct: 199 WSLGIMAIEMVEGEPPYLNE 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 70.6 bits (173), Expect = 1e-12
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 42/182 (23%)

Query: 391 FLAELSIIACLRHKNLVQLL--GWCAEKGELLLVYEYMPNGSLDRMLYQD-----SENGV 443
           F  E ++ A L H N+V LL  G     G L  V+EY+P  +L  +L  D      E G 
Sbjct: 25  FRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEYVPGRTLREVLAADGALPAGETGR 83

Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA----------------- 486
           L+     L ++  LA A    H    Q ++HRD+K  NIM+                   
Sbjct: 84  LM-----LQVLDALACA----H---NQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTL 131

Query: 487 --NFNARLESSFTLTA---GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIER 541
                    ++ T T    GT  Y APE L+    T  +D++++G++ LE   G+R ++ 
Sbjct: 132 LPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQG 191

Query: 542 ET 543
            +
Sbjct: 192 AS 193

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 75/312 (24%), Positives = 122/312 (39%), Gaps = 84/312 (26%)

Query: 356 LGRGAFGNVY--------------KAYFASSGSVA--AVK--RSKHSHEGKTEFLAELSI 397
           LG G FG V+               A   ++ +    AVK  R   S   + +FL E+ I
Sbjct: 13  LGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKI 72

Query: 398 IACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-------DSENGVLLSWYHR 450
           ++ L   N+ +LLG C     L ++ EYM NG L++ L +        + N   LS+   
Sbjct: 73  LSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTL 132

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-----------NA------RLE 493
           L +   +AS + YL        +HRD+   N ++  N+           N       R++
Sbjct: 133 LYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ 189

Query: 494 SSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVA--CGRRPIERETEGHKMVNL 551
               L    + ++A E +  G  T K+DV+++GV + E+   C  +P E  T+       
Sbjct: 190 GRAPL---PIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD------- 239

Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLL------------VGLSCANPDSSAR 599
              V         IE A     G F  D+ +++ L            + L C   D   R
Sbjct: 240 -QQV---------IENA-----GHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDR 284

Query: 600 PSMRRVFQILNN 611
           P+ R +   L  
Sbjct: 285 PTFREIHLFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 68.2 bits (166), Expect = 1e-12
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 31/222 (13%)

Query: 343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL- 401
           LR     F    ++G G +G VYK     +G +AA+K    + + + E   E++++    
Sbjct: 1   LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS 60

Query: 402 RHKNLVQLLGWCAEKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            H+N+    G   +K       +L LV E+   GS+  ++     N +   W     I  
Sbjct: 61  HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICR 118

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GT 502
            +   L++LHQ    +VIHRDIK  N++L  N   +L   F ++A             GT
Sbjct: 119 EILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKL-VDFGVSAQLDRTVGRRNTFIGT 174

Query: 503 MGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPI 539
             ++APE +        T   K+D++S G+  +E+A G  P+
Sbjct: 175 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 26/209 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACL-RHKNLVQ 408
           ++LG+G+FG V  A    +  + AVK  K     + +     + E  ++A   +H  L Q
Sbjct: 1   KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K  L  V EY+  G L   ++    +G              +   L +LH   
Sbjct: 61  LHSCFQTKDRLFFVMEYVNGGDL---MFHIQRSGRF-DEPRARFYAAEIVLGLQFLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGT 515
           E+ +I+RD+K  N++LD+  + ++ + F +               GT  Y+APE L Y  
Sbjct: 114 ERGIIYRDLKLDNVLLDSEGHIKI-ADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP 172

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETE 544
                D ++ GV++ E+  G+ P E + E
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGDDE 201

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 23/206 (11%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLG 411
           ++G GA+G V K     +  + A+K+ K S E    K   L EL ++  L+ +N+V+L  
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               +G+L LV+EY+    L+  L ++  NGV        + +  L  A+ + H+     
Sbjct: 68  AFRRRGKLYLVFEYVEKNMLE--LLEEMPNGVPPEKVR--SYIYQLIKAIHWCHK---ND 120

Query: 472 VIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATE 518
           ++HRDIK  N+++  N   +L              +++T    T  Y +PE L      +
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK 180

Query: 519 KTDVFSYGVVVLEVACGRRPIERETE 544
             D++S G ++ E++ G+     E+E
Sbjct: 181 AVDMWSVGCILGELSDGQPLFPGESE 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 35/224 (15%)

Query: 343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL- 401
           LR     F    ++G G +G VYK     +G +AA+K    + + + E   E++++    
Sbjct: 11  LRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS 70

Query: 402 RHKNLVQLLGWCAEKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSW--YHRLNI 453
            H+N+    G   +K       +L LV E+   GS+  ++     N +   W  Y    I
Sbjct: 71  HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREI 130

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------- 500
           + GLA    +LH     +VIHRDIK  N++L  N   +L   F ++A             
Sbjct: 131 LRGLA----HLHA---HKVIHRDIKGQNVLLTENAEVKL-VDFGVSAQLDRTVGRRNTFI 182

Query: 501 GTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPI 539
           GT  ++APE +        T   ++D++S G+  +E+A G  P+
Sbjct: 183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 23/212 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A    SG   AVK      + + E L  E+ I+   +H+N+V++     
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL ++ E++  G+L  ++ Q       L+      +   +  AL YLH    Q VIH
Sbjct: 89  VGEELWVLMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHS---QGVIH 140

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATEKTD 521
           RDIK+ +I+L  +   +L S F   A             GT  ++APE +       + D
Sbjct: 141 RDIKSDSILLTLDGRVKL-SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD 199

Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           ++S G++V+E+  G  P   ++    M  L D
Sbjct: 200 IWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 231

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLG--W 412
           +G+G +G VYK      GS+AAVK      +   E  AE +I+  L  H N+V+  G  +
Sbjct: 30  IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89

Query: 413 CAEK---GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN---IVVGLASALTYLHQ 466
            A+K   G+L LV E    GS+  ++        LL    RL+   I   L  AL  L  
Sbjct: 90  KADKLVGGQLWLVLELCNGGSVTELVKG------LLICGQRLDEAMISYILYGALLGLQH 143

Query: 467 ECEQQVIHRDIKASNIML---------DANFNARLESS---FTLTAGTMGYLAPEYL--- 511
               ++IHRD+K +NI+L         D   +A+L S+      + GT  ++APE +   
Sbjct: 144 LHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 203

Query: 512 -QYGTATE-KTDVFSYGVVVLEVACGRRPI 539
            QY  + + + DV+S G+  +E+  G  P+
Sbjct: 204 QQYDYSYDARCDVWSLGITAIELGDGDPPL 233

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 67.4 bits (164), Expect = 3e-12
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 23/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A   SSG + AVK+     + + E L  E+ I+   +H+N+V++     
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V E++  G+L  ++     N   ++      + + +  AL+ LH    Q VIH
Sbjct: 88  VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLKALSVLHA---QGVIH 139

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATEKTD 521
           RDIK+ +I+L  +   +L S F   A             GT  ++APE +       + D
Sbjct: 140 RDIKSDSILLTHDGRVKL-SDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G++V+E+  G  P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 31/213 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + +GA+G V+ A   S+G + A+K              + L E  I++  +   +V+L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               K  L LV EY+P G L  +L    EN   L        +  +  AL YLH      
Sbjct: 61  SFQGKKNLYLVMEYLPGGDLASLL----ENVGSLDEDVARIYIAEIVLALEYLHS---NG 113

Query: 472 VIHRDIKASNIMLDANFNARLE----SSFTLT----------------AGTMGYLAPEYL 511
           +IHRD+K  NI++D+N + +L     S   L                  GT  Y+APE +
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                ++  D +S G ++ E   G  P   ET 
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP 206

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 28/196 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+V+LL  
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              + +L LV+E++     D   + D+     +      + +  L   L + H     +V
Sbjct: 68  IHTENKLYLVFEFL---HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRV 121

Query: 473 IHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL----QYGTA 516
           +HRD+K  N++++     +L              ++T    T+ Y APE L     Y TA
Sbjct: 122 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 181

Query: 517 TEKTDVFSYGVVVLEV 532
               D++S G +  E+
Sbjct: 182 ---VDIWSLGCIFAEM 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 67.1 bits (163), Expect = 4e-12
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 139

Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199

Query: 523 FSYGVVVLEVACGRRPIERE 542
           +S G++ +E+  G  P   E
Sbjct: 200 WSLGIMAIEMIEGEPPYLNE 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 67.0 bits (163), Expect = 6e-12
 Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQL 409
           ++LG+G FG V      ++G   A+K  K     + +     L E  ++   RH  L  L
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                    L  V EY   G L   L ++       + ++   IV    SAL YLH E  
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----SALDYLHSE-- 114

Query: 470 QQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQYGTAT 517
           + V++RD+K  N+MLD + + ++             ++     GT  YLAPE L+     
Sbjct: 115 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG 174

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA----ADKRLN 573
              D +  GVV+ E+ CGR P   + +  K+  L+     L  E R        A   L+
Sbjct: 175 RAVDWWGLGVVMYEMMCGRLPFYNQ-DHEKLFELI-----LMEEIRFPRTLSPEAKSLLS 228

Query: 574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVPKLKPCLT 626
           G   +D  +RL         PD +      + F   +  +  E  +VP  KP +T
Sbjct: 229 GLLKKDPKQRL------GGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVT 277

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 67.0 bits (164), Expect = 6e-12
 Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 24/214 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +G+G +G V+ A    +G + A+KR K             L E  I+   + + LV+LL 
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLY 68

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              +   L L  EY+P G    +L   +  GVL   + R  +      A+  LH+     
Sbjct: 69  AFQDDEYLYLAMEYVPGGDFRTLL---NNLGVLSEDHARFYMAEMFE-AVDALHE---LG 121

Query: 472 VIHRDIKASNIMLDANFNARLESSFTLTAGTMG----------YLAPEYLQYGTATEKT- 520
            IHRD+K  N ++DA+ + +L + F L+ G +           Y+APE L  G   + T 
Sbjct: 122 YIHRDLKPENFLIDASGHIKL-TDFGLSKGIVTYANSVVGSPDYMAPEVL-RGKGYDFTV 179

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW 554
           D +S G ++ E  CG  P    T      NL  W
Sbjct: 180 DYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW 213

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 66.1 bits (161), Expect = 7e-12
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)

Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 12  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 70

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENG---VLLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 71  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HRD+ A N M+  +F  ++          E+ +    G     + +
Sbjct: 131 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEIT 215

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 66.7 bits (162), Expect = 8e-12
 Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 22/205 (10%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  ++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            ++  G    +    LV EY    + D +          L       I  G    L YLH
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAITHGALQGLAYLH 142

Query: 466 QECEQQVIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQYG 514
                 +IHRDIKA NI+L        A+F +A + S      GT  ++APE    +  G
Sbjct: 143 S---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEG 199

Query: 515 TATEKTDVFSYGVVVLEVACGRRPI 539
               K DV+S G+  +E+A  + P+
Sbjct: 200 QYDGKVDVWSLGITCIELAERKPPL 224

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 68.3 bits (167), Expect = 8e-12
 Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 63/246 (25%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG----KTEFLAELSIIACLRHKNLVQL 409
           R++G+G  G VY AY        A+K+ +         K  FL E  I A L H  +V +
Sbjct: 8   RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPV 67

Query: 410 LGWCAEKGELLLVYEYMP----------------NGSLDRMLYQDSENGVLLSWYHRLNI 453
              C++      VY  MP                  SL + L + +  G  LS +H++  
Sbjct: 68  YSICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI-- 122

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIML---------------------------DA 486
                + + Y+H    + V+HRD+K  NI+L                           D 
Sbjct: 123 ----CATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDV 175

Query: 487 NFNARLESSFTL---TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           +      SS T+     GT  Y+APE L    A+E TD+++ GV++ ++     P  R+ 
Sbjct: 176 DERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK- 234

Query: 544 EGHKMV 549
           +G K+ 
Sbjct: 235 KGRKIS 240

Length = 932

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 66.3 bits (162), Expect = 8e-12
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 32/203 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG G  G V K     SG + A K   H       + + + EL ++       +V   G 
Sbjct: 9   LGAGNGGVVTKVLHRPSGLIMARK-LIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGA 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDS---ENGVLLSWYHRLNIVVGLASALTYLHQECE 469
               GE+ +  E+M  GSLD++L +     EN  +L       I + +   LTYL ++  
Sbjct: 68  FYSDGEISICMEHMDGGSLDQVLKKAGRIPEN--ILG-----KISIAVLRGLTYLREK-- 118

Query: 470 QQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTA 516
            +++HRD+K SNI++++    +L              +SF    GT  Y++PE LQ    
Sbjct: 119 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHY 175

Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
           T ++D++S G+ ++E+A GR PI
Sbjct: 176 TVQSDIWSLGLSLVEMAIGRYPI 198

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 66.4 bits (162), Expect = 1e-11
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 33/212 (15%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSK-----HSHEGKTEFLAELSIIACLRHKN 405
           ++LG+G +G V+   K   A +G + A+K  K      + +      AE +I+  ++H  
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLL---SWYHRLNIVVGLASALT 462
           +V L+      G+L L+ EY+  G L   L ++   G+ +   + ++   I +    AL 
Sbjct: 62  IVDLIYAFQTGGKLYLILEYLSGGELFMHLERE---GIFMEDTACFYLSEISL----ALE 114

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEY 510
           +LHQ   Q +I+RD+K  NI+LDA  + +L           E + T T  GT+ Y+APE 
Sbjct: 115 HLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI 171

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERE 542
           L      +  D +S G ++ ++  G  P   E
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE 203

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 1e-11
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 61/219 (27%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG-KTEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA    +G + A+K  R +   EG  +  + E+S++  L H N+V+LL  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66

Query: 413 CAEKGELLLVYEYM-----------PNGSLDRML-----YQDSENGVLLSWYHRLNIVVG 456
              + +L LV+E++           P   LD  L     YQ                   
Sbjct: 67  VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQ------------------- 107

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMG 504
           L   + Y H     +V+HRD+K  N+++D     +L              ++T    T+ 
Sbjct: 108 LLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLW 164

Query: 505 YLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           Y APE L    QY T     D++S G +  E+   RRP+
Sbjct: 165 YRAPEILLGSRQYSTP---VDIWSIGCIFAEM-VNRRPL 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 31/214 (14%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAE---LSIIACLRHKNLV 407
           I+GRG FG VY    A +G + A+K    +     +G+T  L E   LS+++      +V
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS---WYHRLNIVVGLASALTYL 464
            +        +L  + + M  G L    Y  S++GV       ++   I++GL     ++
Sbjct: 61  CMTYAFHTPDKLCFILDLMNGGDLH---YHLSQHGVFSEKEMRFYATEIILGLE----HM 113

Query: 465 HQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPEYLQYG 514
           H    + V++RD+K +NI+LD + + R     L   F+      + GT GY+APE LQ G
Sbjct: 114 HN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 170

Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETEGHK 547
           TA + + D FS G ++ ++  G  P  +     K
Sbjct: 171 TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 204

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A    +G   AVK+     + + E L  E+ I+    H+N+V +     
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V E++  G+L  ++     N   ++      + + +  AL+YLH    Q VIH
Sbjct: 90  VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN---QGVIH 141

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEY---LQYGTATE 518
           RDIK+ +I+L ++   +L S F   A             GT  ++APE    L YGT   
Sbjct: 142 RDIKSDSILLTSDGRIKL-SDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGT--- 197

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           + D++S G++V+E+  G  P   E     M  + D
Sbjct: 198 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   R+LG+G FG V      ++G + A K+ +       +G++  L E  I+  +  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV--LLSWYHRLNIVVGLASALTY 463
           +V L      K  L LV   M  G L   +Y   E G     + ++   I  GL      
Sbjct: 62  VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED---- 117

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTLTAGTMGYLAPEYLQ 512
           LHQE   ++++RD+K  NI+LD + + R+             +     GT+GY+APE ++
Sbjct: 118 LHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK 174

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIER 541
               T   D ++ G ++ E+  G+ P ++
Sbjct: 175 NERYTFSPDWWALGCLLYEMIAGQSPFQQ 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V K     SG + A K    +     + + + EL ++       +V   G  
Sbjct: 13  LGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +       +     + ++ GLA    YL ++   Q++
Sbjct: 73  YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA----YLREK--HQIM 126

Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 186

Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 187 SMGLSLVELAIGRYPI 202

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 70/280 (25%)

Query: 375 VAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD 432
           + AVK  R   +   + +FL E+ I++ L+  N+++LLG C ++  L ++ EYM NG L+
Sbjct: 48  LVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLN 107

Query: 433 -----RMLYQDSENGV----------LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDI 477
                  L    ENG            +S+   L++ + +AS + YL        +HRD+
Sbjct: 108 QFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDL 164

Query: 478 KASNIMLDANFNARLES---SFTLTAGT-----------MGYLAPEYLQYGTATEKTDVF 523
              N ++  N   ++     S  L AG            + ++A E +  G  T  +DV+
Sbjct: 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVW 224

Query: 524 SYGVVVLEV--ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEM 581
           ++GV + E+   C  +P                 +G   + ++IE A     G F  D+ 
Sbjct: 225 AFGVTLWEILMLCKEQP-----------------YGELTDEQVIENA-----GEFFRDQG 262

Query: 582 KRLLL------------VGLSCANPDSSARPSMRRVFQIL 609
           +++ L            + L C + D   RPS   +   L
Sbjct: 263 RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 39/213 (18%)

Query: 355 ILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKNL 406
            LG GAFG V KA        +  S  AVK  K     K  ++ ++E+ ++  + +HKN+
Sbjct: 19  PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 78

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL-----DR----MLYQDSENGVL---LSWYHRLNIV 454
           + LLG C ++G L +V EY  +G+L      R          +       L+    ++  
Sbjct: 79  INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------TMG 504
             +A  + +L     ++ IHRD+ A N+++  +   ++ + F L             T G
Sbjct: 139 YQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKI-ADFGLARDIHHIDYYRKTTNG 194

Query: 505 YL-----APEYLQYGTATEKTDVFSYGVVVLEV 532
            L     APE L     T ++DV+S+GV++ E+
Sbjct: 195 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 227

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 41/209 (19%)

Query: 356 LGRGAFGNVY--KAYFASSGSVAAVKRSKHSHEGKTE--FLAELSIIACLRHKNLVQLLG 411
           +G G FG V   +A+   S +   VK  + S     +  FL E+     L H N++Q LG
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 412 WCAEKGELLLVYEYMPNGSLDR-------MLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            C E    LLV E+ P G L         M+ Q ++  VL            +AS L +L
Sbjct: 63  QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACE------VASGLLWL 116

Query: 465 HQECEQQVIHRDIKASNIMLDANFN----------ARLESSFTLTAGT----MGYLAPEY 510
           HQ      IH D+   N  L A+ +           +    + +T       + +LAPE 
Sbjct: 117 HQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPEL 173

Query: 511 -------LQYGTATEKTDVFSYGVVVLEV 532
                  L     T+K++++S GV + E+
Sbjct: 174 VEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 64.7 bits (157), Expect = 3e-11
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 22/205 (10%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  LRH N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            +Q  G    +    LV EY    + D +          L       +  G    L YLH
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLH 132

Query: 466 QECEQQVIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQYG 514
                 +IHRD+KA NI+L         +F +A + +      GT  ++APE    +  G
Sbjct: 133 S---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 189

Query: 515 TATEKTDVFSYGVVVLEVACGRRPI 539
               K DV+S G+  +E+A  + P+
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 64.3 bits (156), Expect = 3e-11
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 36/210 (17%)

Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG   FG VYK +             A+K  K   EG  + EF  E  + + L+H N+V 
Sbjct: 13  LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC 72

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRLNIVVG 456
           LLG   ++  L +++ Y  +  L   L   S +  +            L     ++IV  
Sbjct: 73  LLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----------SFTLTAGTM-- 503
           +A+ + +L       V+H+D+   N+++    N ++              + L   ++  
Sbjct: 133 IAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLP 189

Query: 504 -GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
             +++PE + YG  +  +D++SYGVV+ EV
Sbjct: 190 IRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 64.7 bits (157), Expect = 3e-11
 Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 33/291 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQL 409
           ++LG+G FG V      +SG   A+K  K     + +     L E  ++   RH  L  L
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                 K  L  V EY+  G L   L ++       + ++   IV    SAL YLH    
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIV----SALDYLHS--- 113

Query: 470 QQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQYGTAT 517
            ++++RD+K  N+MLD + + ++             ++     GT  YLAPE L+     
Sbjct: 114 GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYG 173

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
              D +  GVV+ E+ CGR P   + +  K+  L+  +  +     +   A   L+G   
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPFYNQ-DHEKLFELI-LMEDIKFPRTLSADAKSLLSGLLI 231

Query: 578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILN--NEAEPLVVPKLKPCLT 626
           +D  KRL         PD +        F  +N  +  +  +VP  KP +T
Sbjct: 232 KDPNKRL------GGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVT 276

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCA 414
           +G+G +G V+K     +GS AAVK     H+   E  AE +I+  L  H N+V+  G   
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYY 85

Query: 415 EK-----GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +K      +L LV E    GS+  ++    + G  +       I   L  AL  L     
Sbjct: 86  KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERME---EPIIAYILHEALMGLQHLHV 142

Query: 470 QQVIHRDIKASNIML---------DANFNARLESS---FTLTAGTMGYLAPEYLQY---- 513
            + IHRD+K +NI+L         D   +A+L S+      + GT  ++APE +      
Sbjct: 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQL 202

Query: 514 -GTATEKTDVFSYGVVVLEVACGRRPI 539
             T   + DV+S G+  +E+  G  P+
Sbjct: 203 DSTYDARCDVWSLGITAIELGDGDPPL 229

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 63.4 bits (154), Expect = 4e-11
 Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 31/208 (14%)

Query: 356 LGRGAFGNVYKAYFA--SSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLL 410
           LG G FG V K  +    S    AVK  K+ +     K E L E +++  L +  +V+++
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G C E    +LV E    G L++ L ++      ++  +   +V  ++  + YL    E 
Sbjct: 63  GIC-EAESWMLVMELAELGPLNKFLQKNKH----VTEKNITELVHQVSMGMKYLE---ET 114

Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEYLQYG 514
             +HRD+ A N++L     A++ S F L+           A T G     + APE + Y 
Sbjct: 115 NFVHRDLAARNVLLVTQHYAKI-SDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173

Query: 515 TATEKTDVFSYGVVVLEV-ACGRRPIER 541
             + K+DV+S+GV++ E  + G++P + 
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKG 201

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 64.3 bits (156), Expect = 4e-11
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 18/196 (9%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG + A K    +     + + + EL ++       +V   G  
Sbjct: 13  LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 73  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 126

Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 186

Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 187 SMGLSLVEMAIGRYPI 202

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 63.9 bits (156), Expect = 5e-11
 Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 34/201 (16%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQL 409
           NRI G G +G VY+A   +SG + A+K+ +  +E        L E++++  LRH N+V+L
Sbjct: 13  NRI-GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVEL 71

Query: 410 LGWCAEK--GELLLVYEYMPN--GSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                 K    + LV EY      SL D M    SE+ V         +++ L   L YL
Sbjct: 72  KEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKC-------LMLQLLRGLQYL 124

Query: 465 HQECEQQVIHRDIKASNIMLD-------ANFN-ARLES----SFTLTAGTMGYLAPEYLQ 512
           H+     +IHRD+K SN++L        A+F  AR         T    T+ Y APE L 
Sbjct: 125 HENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELL- 180

Query: 513 YG--TATEKTDVFSYGVVVLE 531
            G  T T   D+++ G ++ E
Sbjct: 181 LGCTTYTTAIDMWAVGCILAE 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 32/208 (15%)

Query: 354 RILGRGAFGNVYKAYFA--------SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY+            +  ++  V  +    E + EFL E S++      +
Sbjct: 12  RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRE-RIEFLNEASVMKEFNCHH 70

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLLS---WYHRLNIVVGLAS 459
           +V+LLG  ++    L++ E M  G L    R L  + EN  + +       + +   +A 
Sbjct: 71  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+     + +HRD+ A N M+  +F  ++          E+ +    G     + +
Sbjct: 131 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           ++PE L+ G  T  +DV+S+GVV+ E+A
Sbjct: 188 MSPESLKDGVFTTYSDVWSFGVVLWEIA 215

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 63.1 bits (153), Expect = 6e-11
 Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 21/202 (10%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           R++G G+FG        +S    A+K     K S   +     E  ++A ++H N+V   
Sbjct: 6   RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDS-RKEAVLLAKMKHPNIVAFK 64

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                 G L +V EY   G L + +    + G L      L   V +   + ++H   E+
Sbjct: 65  ESFEADGHLYIVMEYCDGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIH---EK 119

Query: 471 QVIHRDIKASNIMLDANFN--------ARLES---SFTLT-AGTMGYLAPEYLQYGTATE 518
           +V+HRDIK+ NI L  N          ARL +   ++  T  GT  Y+ PE  +      
Sbjct: 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNN 179

Query: 519 KTDVFSYGVVVLEVACGRRPIE 540
           K+D++S G ++ E+   + P +
Sbjct: 180 KSDIWSLGCILYELCTLKHPFQ 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 63.9 bits (155), Expect = 6e-11
 Identities = 76/301 (25%), Positives = 120/301 (39%), Gaps = 53/301 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTEF---LAELSIIACLRHKNLVQL 409
           ++LG+G FG V      ++G   A+K   K     K E    + E  ++   RH  L  L
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
                    L  V EY   G L      +R+  ++         ++   IV    SAL Y
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR------FYGAEIV----SALEY 110

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYL 511
           LH    + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L
Sbjct: 111 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 167

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR----IIEA 567
           +        D +  GVV+ E+ CGR P   + +  ++  L+     L  E R    +   
Sbjct: 168 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELI-----LMEEIRFPRTLSPE 221

Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN--NEAEPLVVPKLKPCL 625
           A   L G   +D  +RL         P  +      R F  +N  +  +  ++P  KP +
Sbjct: 222 AKSLLAGLLKKDPKQRL------GGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQV 275

Query: 626 T 626
           T
Sbjct: 276 T 276

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 63.5 bits (155), Expect = 6e-11
 Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 43/215 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           +        ++ K     + ++ AVK+      S E       E+     L+H N++  +
Sbjct: 8   KCFEDLMIVHLAKH--KPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYV 65

Query: 411 GWCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
                  EL +V   M  GS + +L   + +    + ++      I+  + +AL Y+H +
Sbjct: 66  TSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIA-----FILKDVLNALDYIHSK 120

Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT---------AGTMGYLAP 508
                IHR +KAS+I+L  +    L          +                  + +L+P
Sbjct: 121 ---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSP 177

Query: 509 EYLQ-----YGTATEKTDVFSYGVVVLEVACGRRP 538
           E LQ     Y    EK+D++S G+   E+A G  P
Sbjct: 178 EVLQQNLQGY---NEKSDIYSVGITACELANGHVP 209

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 62.8 bits (153), Expect = 9e-11
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 42/210 (20%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG-KTEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYK     +G + A+K  R +   EG  +  + E+S++  L+H N+V L   
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDS-------ENGVLLSWYHRLNIVVGLASALTYLH 465
             ++  L L++E++   S+D   Y DS       +  ++ S+ ++      +   + + H
Sbjct: 68  LMQESRLYLIFEFL---SMDLKKYLDSLPKGQYMDAELVKSYLYQ------ILQGILFCH 118

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL-- 511
               ++V+HRD+K  N+++D     +L               +T    T+ Y APE L  
Sbjct: 119 S---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG 175

Query: 512 --QYGTATEKTDVFSYGVVVLEVACGRRPI 539
             +Y T     D++S G +  E+A  ++P+
Sbjct: 176 SPRYSTP---VDIWSIGTIFAEMAT-KKPL 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 62.9 bits (154), Expect = 1e-10
 Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 50/213 (23%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKH--------SHEGKTEFLAELSIIACLRHK 404
           + LG G+FG V       SG   A+K  SK          H      L E  I+  +RH 
Sbjct: 7   KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEH-----VLNEKRILQSIRHP 61

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL------A 458
            LV L G   +   L LV EY+P G L   L +            R    V         
Sbjct: 62  FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK----------SGRFPEPVARFYAAQVV 111

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDAN---------FNARLES-SFTLTAGTMGYLAP 508
            AL YLH      +++RD+K  N++LD++         F  R++  ++TL  GT  YLAP
Sbjct: 112 LALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL-CGTPEYLAP 167

Query: 509 EYLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
           E +    YG A    D ++ G+++ E+  G  P
Sbjct: 168 EIILSKGYGKA---VDWWALGILIYEMLAGYPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 35/206 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF-LAELSIIACLRHKNLVQLLGW 412
           +G G +G V+KA    +  + A+KR +     EG     L E+ ++  L+HKN+V+L   
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENG-----VLLSWYHRLNIVVGLASALTYLHQE 467
                +L LV+EY      D   Y DS NG     ++ S+  +L  + GLA    + H  
Sbjct: 68  LHSDKKLTLVFEYCDQ---DLKKYFDSCNGDIDPEIVKSFMFQL--LKGLA----FCHS- 117

Query: 468 CEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGT 515
               V+HRD+K  N++++ N   +L               ++    T+ Y  P+ L +G 
Sbjct: 118 --HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL-FGA 174

Query: 516 ATEKT--DVFSYGVVVLEVACGRRPI 539
               T  D++S G +  E+A   RP+
Sbjct: 175 KLYSTSIDMWSAGCIFAELANAGRPL 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 63/210 (30%), Positives = 85/210 (40%), Gaps = 41/210 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQL 409
           ++LG+G FG V      ++G   A+K  K     + +     L E  ++   RH  L  L
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL---NIVVGLASALTYLHQ 466
                    L  V EY   G L    +  S   V      R     IV    SAL YLH 
Sbjct: 61  KYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIV----SALGYLH- 112

Query: 467 ECEQQVIHRDIKASNIMLD-------ANF--------NARLESSFTLTAGTMGYLAPEYL 511
                V++RD+K  N+MLD        +F        +     +F    GT  YLAPE L
Sbjct: 113 --SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF---CGTPEYLAPEVL 167

Query: 512 Q---YGTATEKTDVFSYGVVVLEVACGRRP 538
           +   YG A    D +  GVV+ E+ CGR P
Sbjct: 168 EDNDYGRAV---DWWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 24/212 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   R+LG+G FG V      ++G + A KR +       +G++  L E  I+  +  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--LSWYHRLNIVVGLASALTY 463
           +V L      K  L LV   M  G L   +Y     G     + ++   I+ GL      
Sbjct: 62  VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLE----D 117

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTLTAGTMGYLAPEYLQ 512
           LH+E     ++RD+K  NI+LD   + R+             S     GT+GY+APE L 
Sbjct: 118 LHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLN 174

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
               T   D +  G ++ E+  G+ P     E
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 33/206 (16%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLAE---LSIIACLRHKNL 406
           I+GRG FG VY    A +G + A+K     R K   +G+T  L E   LS+++      +
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFI 59

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW---YHRLNIVVGLASALTY 463
           V +        +L  + + M  G L    Y  S++GV       ++   I++GL     +
Sbjct: 60  VCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEAEMRFYAAEIILGLE----H 112

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPEYLQY 513
           +H    + V++RD+K +NI+LD + + R     L   F+      + GT GY+APE LQ 
Sbjct: 113 MHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 169

Query: 514 GTATEKT-DVFSYGVVVLEVACGRRP 538
           G A + + D FS G ++ ++  G  P
Sbjct: 170 GVAYDSSADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 22/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG VYK     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 12  IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY 71

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L    + G L   Y    I+  +   L YLH E   + I
Sbjct: 72  LKGTKLWIIMEYLGGGSALDLL----KPGPLEETY-IATILREILKGLDYLHSE---RKI 123

Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L    + +L         T T        GT  ++APE ++      K D
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKAD 183

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G+  +E+A G  P
Sbjct: 184 IWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 61.1 bits (148), Expect = 3e-10
 Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 65/284 (22%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSI-----------------I 398
           LG+G+FG VY            VK  K   E + + L E+ +                 +
Sbjct: 8   LGKGSFGTVY-----------LVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLL 56

Query: 399 ACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
           + L H  +V+      E+    ++ EY     LD  L +    G  LS        + L 
Sbjct: 57  SKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLL 116

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANF--------------NARLESSFTLTAGTMG 504
             + Y+HQ   ++++HRD+KA NI L  N               +  L ++FT   GT  
Sbjct: 117 LGVHYMHQ---RRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFT---GTPY 170

Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI 564
           Y++PE L++     K+D++S G ++ E+ C    +    EG   +++V          RI
Sbjct: 171 YMSPEALKHQGYDSKSDIWSLGCILYEMCC----LAHAFEGQNFLSVVL---------RI 217

Query: 565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
           +E     L   ++    ++L  +  S  N D S RPS   + + 
Sbjct: 218 VEGPTPSLPETYS----RQLNSIMQSMLNKDPSLRPSAAEILRN 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 61.5 bits (149), Expect = 3e-10
 Identities = 66/307 (21%), Positives = 126/307 (41%), Gaps = 78/307 (25%)

Query: 356 LGRGAFGNVY-----------KAYFASSGS-----VAAVK--RSKHSHEGKTEFLAELSI 397
           LG G FG V+              F+   S     + AVK  R   +   + +FL E+ I
Sbjct: 13  LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKI 72

Query: 398 IACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-------DSENGVLLSWYHR 450
           ++ L+  N+++LL  C     L ++ EYM NG L++ L +       +  + V +S+   
Sbjct: 73  MSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTL 132

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---SFTLTAGT----- 502
           + +   +AS + YL        +HRD+   N ++  N+  ++     S  L +G      
Sbjct: 133 IFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQ 189

Query: 503 ------MGYLAPEYLQYGTATEKTDVFSYGVVVLEVA--CGRRPIERETEGHKMVNLVDW 554
                 + +++ E +  G  T  +DV+++GV + E+   C  +P                
Sbjct: 190 GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP---------------- 233

Query: 555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLL------------VGLSCANPDSSARPSM 602
            +   ++ ++IE       G F  D+ +++ L            + LSC   ++  RPS 
Sbjct: 234 -YSQLSDEQVIEN-----TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF 287

Query: 603 RRVFQIL 609
           + +   L
Sbjct: 288 QEIHATL 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 61.1 bits (148), Expect = 4e-10
 Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 31/203 (15%)

Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y     ++G   AVK  K    G    +   E+ I+  L H+N+V
Sbjct: 10  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 69

Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C E G   + L+ E++P+GSL   L     N   ++   +L   V +   + YL 
Sbjct: 70  KYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PRNKNKINLKQQLKYAVQICKGMDYLG 126

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT----------------MGYLAPE 509
               +Q +HRD+ A N+++++    ++   F LT                   + + APE
Sbjct: 127 S---RQYVHRDLAARNVLVESEHQVKI-GDFGLTKAIETDKEYYTVKDDLDSPVFWYAPE 182

Query: 510 YLQYGTATEKTDVFSYGVVVLEV 532
            L        +DV+S+GV + E+
Sbjct: 183 CLIQSKFYIASDVWSFGVTLYEL 205

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 61.1 bits (148), Expect = 4e-10
 Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 62/306 (20%)

Query: 353 NRILGRGAFGNVYKAY-FASSG----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKN 405
            + LG G FG V KA  F   G    +  AVK  K   S     + L+E +++  + H +
Sbjct: 5   GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPH 64

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDS--ENGVLLSWYHRLNIV--------V 455
           +++L G C++ G LLL+ EY   GSL   L +        L S  +R +          +
Sbjct: 65  VIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL 124

Query: 456 GLASALTYLHQEC-------EQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------ 502
            +   +++  Q         E +++HRD+ A N+++      ++ S F L+         
Sbjct: 125 TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKI-SDFGLSRDVYEEDSY 183

Query: 503 ---------MGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVNLV 552
                    + ++A E L     T ++DV+S+GV++ E V  G  P      G     L 
Sbjct: 184 VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY----PGIAPERL- 238

Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
              + L   G  +E  +         +EM  L+   L+C   +   RP+    F  ++ E
Sbjct: 239 ---FNLLKTGYRMERPEN------CSEEMYNLM---LTCWKQEPDKRPT----FADISKE 282

Query: 613 AEPLVV 618
            E ++V
Sbjct: 283 LEKMMV 288

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 61.5 bits (149), Expect = 4e-10
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 27/203 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIACLRHKN---LVQ 408
           +G+G FG VY+     +  + A+K  SK     K E    + E +I+          +V 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L        +L LV +YM  G L   L ++       + ++    +  L  AL +LH   
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFY----IAELVLALEHLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARL----ESSFTLTA--------GTMGYLAPE-YLQYGT 515
           +  +++RD+K  NI+LDA  +  L     S   LT         GT  YLAPE  L    
Sbjct: 114 KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKG 173

Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
            T+  D +S GV+V E+ CG  P
Sbjct: 174 YTKHVDFWSLGVLVFEMCCGWSP 196

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 61.7 bits (150), Expect = 4e-10
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 47/228 (20%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE---FLAELS 396
            +LR     F   +++GRGAFG V      SS  V A+K  SK     +++   F  E  
Sbjct: 36  TKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 397 IIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRML--YQDSENGVLLSW--YHR 450
           I+A    + +VQL    A + +  L +V EYMP G L  ++  Y   E      W  ++ 
Sbjct: 96  IMAHANSEWIVQL--HYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEK-----WARFYT 148

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL------------ 498
             +V+    AL  +H       IHRD+K  N++LD + + +L    T             
Sbjct: 149 AEVVL----ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCD 201

Query: 499 TA-GTMGYLAPEYLQ-------YGTATEKTDVFSYGVVVLEVACGRRP 538
           TA GT  Y++PE L+       YG    + D +S GV + E+  G  P
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYG---RECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 22/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 12  IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L            +    ++  +   L YLH E   + I
Sbjct: 72  LKGTKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEILKGLDYLHSE---KKI 123

Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L    + +L         T T        GT  ++APE +Q      K D
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 183

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G+  +E+A G  P
Sbjct: 184 IWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   R+LG+G FG V      ++G + A K+ +       +G+   L E  I+  +  + 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------DSENGVLLSWYHRLNIVVGLAS 459
           +V L      K  L LV   M  G L   +Y       D +  +    ++   +  GL  
Sbjct: 62  VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAI----FYAAELCCGLED 117

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYLA 507
               L +E   ++++RD+K  NI+LD   + R+ S   L              GT+GY+A
Sbjct: 118 ----LQRE---RIVYRDLKPENILLDDRGHIRI-SDLGLAVQIPEGETVRGRVGTVGYMA 169

Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           PE +     T   D +  G ++ E+  G+ P  +  E
Sbjct: 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 61.0 bits (148), Expect = 5e-10
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 26/204 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKNLVQLLG 411
           LG G+FG V  A    +G   A+K  K     K +       E SI+  L H  +V ++ 
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMC 85

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYLHQECE 469
              ++  +  + E++  G L   L +     N V   +YH       L  A  YLH    
Sbjct: 86  SFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVA-KFYH-----AELVLAFEYLH---S 136

Query: 470 QQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           + +I+RD+K  N++LD   + ++          + +FTL  GT  YLAPE +Q     + 
Sbjct: 137 KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL-CGTPEYLAPEVIQSKGHGKA 195

Query: 520 TDVFSYGVVVLEVACGRRPIERET 543
            D ++ GV++ E   G  P   +T
Sbjct: 196 VDWWTMGVLLYEFIAGYPPFFDDT 219

Length = 329

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 61.1 bits (148), Expect = 5e-10
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 51/240 (21%)

Query: 356 LGRGAFGNVYKA-------YFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V +A                AVK  K +   K   + ++E+ ++  + +HKN
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C ++G L ++ EY   G+L   L      G              LS+   ++ 
Sbjct: 80  IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT----------- 502
              +A  + YL     ++ IHRD+ A N+++  + N    + F L  G            
Sbjct: 140 AYQVARGMEYLES---RRCIHRDLAARNVLVTED-NVMKIADFGLARGVHDIDYYKKTSN 195

Query: 503 ----MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP---IERET------EGHKM 548
               + ++APE L     T ++DV+S+G+++ E+   G  P   I  E       EGH+M
Sbjct: 196 GRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRM 255

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 60.1 bits (146), Expect = 8e-10
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 36/204 (17%)

Query: 356 LGRGAFGNVY-------KAYFA----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           +G G FG V+       + Y+A    +   V  +K+ +H H        E  ++  + H 
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHN-------EKRVLKEVSHP 61

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +++L     ++  L ++ EY+P G L   L            ++   IV     AL YL
Sbjct: 62  FIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIV----CALEYL 117

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYG 514
           H    +++++RD+K  NI+LD   + +L          + ++TL  GT  YLAPE +Q  
Sbjct: 118 HS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL-CGTPEYLAPEVIQSK 173

Query: 515 TATEKTDVFSYGVVVLEVACGRRP 538
              +  D ++ G+++ E+  G  P
Sbjct: 174 GHNKAVDWWALGILIYEMLVGYPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 59.5 bits (144), Expect = 8e-10
 Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 63/287 (21%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK-------HSHEGKTE-FLAELSIIACLRHKNLV 407
           LG+G F  ++K      G    + +++        SH   +E F    S+++ L HK+LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
              G C    E ++V EY+  GSLD  L + ++N + +SW  +L +   LA AL +L   
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYL-KKNKNLINISW--KLEVAKQLAWALHFLE-- 117

Query: 468 CEQQVIHRDIKASNIMLDANFNARLES-----------SFTLTAGTM-----GYLAPEYL 511
            ++ + H ++ A N++L    + +  +           S T+    +      ++ PE +
Sbjct: 118 -DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECI 176

Query: 512 QYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
           +     +   D +S+G  + E+  G         G K ++ +D              + K
Sbjct: 177 ENPQNLSLAADKWSFGTTLWEIFSG---------GDKPLSALD--------------SQK 213

Query: 571 RLNGAFNEDEMK-------RLLLVGLSCANPDSSARPSMRRVFQILN 610
           +L   F ED  +        L  +   C + +   RPS R + + LN
Sbjct: 214 KLQ--FYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 59.7 bits (144), Expect = 9e-10
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 25/207 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 12  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L     +   ++      I+  +   L YLH E   + I
Sbjct: 72  LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE---KKI 123

Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L         T T        GT  ++APE ++      K D
Sbjct: 124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 183

Query: 522 VFSYGVVVLEVACGRRPIERETEGHKM 548
           ++S G+  +E+A G  P    +E H M
Sbjct: 184 IWSLGITAIELAKGEPP---HSELHPM 207

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 34/268 (12%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R+L+     +   +++GRGAFG V      SS  V A+K  SK     +++   F  E  
Sbjct: 36  RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW--YHRLNIV 454
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W  ++   +V
Sbjct: 96  IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVV 152

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFT------LTAG 501
           +    AL  +H      +IHRD+K  N++LD       A+F   ++   T         G
Sbjct: 153 L----ALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVG 205

Query: 502 TMGYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG 557
           T  Y++PE L+     G    + D +S GV + E+  G  P   ++       ++D    
Sbjct: 206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS 265

Query: 558 L-YAEGRIIEAADKRLNGAFNEDEMKRL 584
           L + E   I    K L  AF  D   RL
Sbjct: 266 LNFPEDVEISKHAKNLICAFLTDREVRL 293

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 30/211 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTE-FLAELSIIACLR-HKNLVQ 408
           ++LG+G+FG V  A    +  V A+K  K      +   +  + E  I+A    H  L  
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K  L  V EY+  G L   + +  +     S ++   +      AL +LH+  
Sbjct: 61  LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVT----LALMFLHR-- 114

Query: 469 EQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ---Y 513
              VI+RD+K  NI+LDA  + +L               T T  GT  Y+APE LQ   Y
Sbjct: 115 -HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEY 173

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           G +    D ++ GV++ E+  G+ P E + E
Sbjct: 174 GPS---VDWWALGVLMYEMMAGQPPFEADNE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 45/227 (19%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQLL 410
            +G+G FG V+KA    +  + A+K+    +E K  F    L E+ I+  L+H+N+V L+
Sbjct: 19  KIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLI 77

Query: 411 GWCAE--------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
             C          KG   LV+E+  +  L  +L   S   V  +      ++  L + L 
Sbjct: 78  EICRTKATPYNRYKGSFYLVFEFCEH-DLAGLL---SNKNVKFTLSEIKKVMKMLLNGLY 133

Query: 463 YLHQECEQQVIHRDIKASNIMLD-------ANFN-ARLESSFTLTAG--------TMGYL 506
           Y+H+    +++HRD+KA+NI++        A+F  AR  S    +          T+ Y 
Sbjct: 134 YIHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYR 190

Query: 507 APEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIER-ETEGHKM 548
            PE L     YG      D++  G ++ E+   R PI +  TE H++
Sbjct: 191 PPELLLGERDYGPP---IDMWGAGCIMAEMWT-RSPIMQGNTEQHQL 233

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 33/214 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSV--AAVKRSKHSHEGKTEFLAELSIIACLR---HKNLVQ 408
           + LG G FG+V +       S+   AVK  K +   ++E    LS   C++   H N+++
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64

Query: 409 LLGWCAEKGEL------LLVYEYMPNGSLDR-MLYQD-SENGVLLSWYHRLNIVVGLASA 460
           L+G C +  E       +++  +M +G L   +LY    +    L     +  +  +AS 
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------MGY 505
           + YL     +  IHRD+ A N ML+ N N  + + F L+                  + +
Sbjct: 125 MEYLSS---KSFIHRDLAARNCMLNENMNVCV-ADFGLSKKIYNGDYYRQGRIAKMPVKW 180

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
           +A E L     T K+DV+S+GV + E+A  G+ P
Sbjct: 181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 28/199 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G++  VYK     +G + A+K  +  HE    F A  E S++  L+H N+V L    
Sbjct: 13  LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV---GLASALTYLHQECEQ 470
             K  L LV+EY+     D   Y D   G L       N+ +    L   L Y HQ   +
Sbjct: 73  HTKKTLTLVFEYLDT---DLKQYMDDCGGGL----SMHNVRLFLFQLLRGLAYCHQ---R 122

Query: 471 QVIHRDIKASNIMLD-------ANFN-ARLESSFTLTAG----TMGYLAPEYLQYGTA-T 517
           +V+HRD+K  N+++        A+F  AR +S  + T      T+ Y  P+ L   T  +
Sbjct: 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYS 182

Query: 518 EKTDVFSYGVVVLEVACGR 536
              D++  G +  E+A GR
Sbjct: 183 TSLDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 24/197 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  V+K     + ++ A+K  +  HE      A  E+S++  L+H N+V L    
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +  L LV+EY     LD  L Q  +N G L+S ++    +  L   L+Y H   ++++
Sbjct: 73  HTERCLTLVFEY-----LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKI 124

Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAG----TMGYLAPEYLQYGTA-TEK 519
           +HRD+K  N++++       A+F  AR +S  T T      T+ Y  P+ L   T  +  
Sbjct: 125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTP 184

Query: 520 TDVFSYGVVVLEVACGR 536
            D++  G ++ E+A GR
Sbjct: 185 IDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 40/219 (18%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEFLAELSIIACLR------HKNL 406
            +G GA+G VYKA   ++G   A+K+ +   S EG    L+ L  IA L+      H N+
Sbjct: 6   EIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIP--LSTLREIALLKQLESFEHPNI 63

Query: 407 VQLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           V+LL  C       + +L LV+E++ +  L   L +  + G  L      +++  L   +
Sbjct: 64  VRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLSKCPKPG--LPPETIKDLMRQLLRGV 120

Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFN-ARL---ESSFTLTAGTMGYLAPEY 510
            +LH      ++HRD+K  NI++        A+F  AR+   E + T    T+ Y APE 
Sbjct: 121 DFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEV 177

Query: 511 L---QYGTATEKTDVFSYGVVVLEVACGRRPIER-ETEG 545
           L    Y T     D++S G +  E+   RRP+ R  +E 
Sbjct: 178 LLQSSYATP---VDMWSVGCIFAELF-RRRPLFRGTSEA 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 41/214 (19%)

Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG G FG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRML-----------YQDSENGV-LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L           Y  ++     LS+   ++ 
Sbjct: 86  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 146 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 201

Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 202 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)

Query: 350 FHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSK---HSHEGKTEFLAELSIIACLRH 403
           F   R+LG+G FG+V +A   S   S    AVK  K    S     EFL E + +    H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 404 KNLVQLLGWCAE---KGEL---LLVYEYMPNGSLDRMLYQD--SENGVLLSWYHRLNIVV 455
            N+++L+G       KG L   +++  +M +G L   L      E    L     +  ++
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESSFTLTAGT---------- 502
            +AS + YL     +  IHRD+ A N ML+ N     A    S  + +G           
Sbjct: 121 DIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177

Query: 503 -MGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +LA E L     T  +DV+++GV + E+   G+ P
Sbjct: 178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 51/240 (21%)

Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 83  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSC 142

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 143 TYQVARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDVNNIDYYKKTTN 198

Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP---IERE------TEGHKM 548
           G +   ++APE L     T ++DV+S+GV++ E+   G  P   I  E       EGH+M
Sbjct: 199 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM 258

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 25/176 (14%)

Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           E+ I+  + H+ ++ L+     K  + +V   MP    D   Y D    + L     + I
Sbjct: 136 EIDILKTISHRAIINLIHAYRWKSTVCMV---MPKYKCDLFTYVDRSGPLPLE--QAITI 190

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT---- 499
              L  AL YLH    + +IHRD+K  NI LD   NA L              T      
Sbjct: 191 QRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW 247

Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP---IERETEGHKMVNLV 552
           +GT+   +PE L       KTD++S G+V+ E++         + ++   ++ +++
Sbjct: 248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSII 303

Length = 392

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 25/207 (12%)

Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK-HSHEGKTEFLAELSIIACLR 402
           R+    F   + +G G +G+VYKA   ++G +AA+K  K    E       E+ ++   +
Sbjct: 5   RNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK 64

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           H N+V   G    + +L +  E+   GSL  + +           Y     + G    L 
Sbjct: 65  HSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG----LY 120

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPE 509
           YLH + +   +HRDIK +NI+L  N + +L + F ++A             GT  ++APE
Sbjct: 121 YLHSKGK---MHRDIKGANILLTDNGHVKL-ADFGVSAQITATIAKRKSFIGTPYWMAPE 176

Query: 510 YL---QYGTATEKTDVFSYGVVVLEVA 533
                + G   +  D+++ G+  +E+A
Sbjct: 177 VAAVERKGGYNQLCDIWAVGITAIELA 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G +G+VYKA    +G +AAVK  K         +  E+ ++   +H N+V   G   
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
            + +L +  EY   GSL  + +       L   Y     + GLA    YLH + +   +H
Sbjct: 77  SREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLA----YLHSKGK---MH 129

Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYL---QYGTATE 518
           RDIK +NI+L  N + +L + F + A             GT  ++APE     + G   +
Sbjct: 130 RDIKGANILLTDNGDVKL-ADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQ 188

Query: 519 KTDVFSYGVVVLEVA 533
             D+++ G+  +E+A
Sbjct: 189 LCDIWAVGITAIELA 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 30/209 (14%)

Query: 356 LGRGAFGNVYKAY-FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR------HKNLVQ 408
           +G GA+G V+KA    + G   A+KR +     +   L+ +  +A LR      H N+V+
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 409 LLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           L   C       + +L LV+E++ +  L   L +  E GV        +++  L   L +
Sbjct: 69  LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDF 125

Query: 464 LHQECEQQVIHRDIKASNIMLD-------ANFN-ARLES---SFTLTAGTMGYLAPEYLQ 512
           LH     +V+HRD+K  NI++        A+F  AR+ S   + T    T+ Y APE L 
Sbjct: 126 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 182

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIER 541
             +     D++S G +  E+   R+P+ R
Sbjct: 183 QSSYATPVDLWSVGCIFAEMF-RRKPLFR 210

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 24/197 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  VYK     + ++ A+K  +  HE      A  E+S++  L+H N+V L    
Sbjct: 14  LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 73

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +  L LV+EY     LD+ L Q  ++ G  ++ ++    +  L   L Y H+   ++V
Sbjct: 74  HTEKSLTLVFEY-----LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKV 125

Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAG----TMGYLAPEYLQYGTA-TEK 519
           +HRD+K  N++++       A+F  AR +S  T T      T+ Y  P+ L   T  + +
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQ 185

Query: 520 TDVFSYGVVVLEVACGR 536
            D++  G +  E++ GR
Sbjct: 186 IDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 57.7 bits (139), Expect = 5e-09
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 30/200 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  V+K     + ++ A+K  +  HE      A  E+S++  L+H N+V L    
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                L LV+EY     LD+ L Q  ++ G ++S ++    +  +   L Y H+   ++V
Sbjct: 74  HTDKSLTLVFEY-----LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKV 125

Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAG----TMGYLAPEYL----QYGTA 516
           +HRD+K  N++++       A+F  AR +S  T T      T+ Y  P+ L    +Y T 
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST- 184

Query: 517 TEKTDVFSYGVVVLEVACGR 536
             + D++  G +  E+A GR
Sbjct: 185 --QIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 57.5 bits (139), Expect = 5e-09
 Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 22/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  VYK    ++G + A+K      E  T   A  E+S++  L+H+N+V+L    
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             + +L+LV+EYM +  L + +      G L     + +    L   + + H   E +V+
Sbjct: 68  HTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVK-SFTYQLLKGIAFCH---ENRVL 122

Query: 474 HRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQYGTATEKT- 520
           HRD+K  N++++     +L             ++F+    T+ Y AP+ L  G+ T  T 
Sbjct: 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVL-LGSRTYSTS 181

Query: 521 -DVFSYGVVVLEVACGR 536
            D++S G ++ E+  GR
Sbjct: 182 IDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 57.6 bits (140), Expect = 5e-09
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 44/206 (21%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQ 408
           NRI   G +G VY+A    +G + A+K+ K   E K  F    L E++I+  L+H N+V 
Sbjct: 11  NRI-EEGTYGVVYRARDKKTGEIVALKKLKMEKE-KEGFPITSLREINILLKLQHPNIVT 68

Query: 409 L----LGWCAEKGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           +    +G   +K  + +V EY+ +     ++ M     ++ V         +++ L S +
Sbjct: 69  VKEVVVGSNLDK--IYMVMEYVEHDLKSLMETMKQPFLQSEVK-------CLMLQLLSGV 119

Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPE 509
            +LH      ++HRD+K SN++L+        +F  AR   S    +T    T+ Y APE
Sbjct: 120 AHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPE 176

Query: 510 YL----QYGTATEKTDVFSYGVVVLE 531
            L    +Y TA    D++S G +  E
Sbjct: 177 LLLGAKEYSTA---IDMWSVGCIFAE 199

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 57.8 bits (140), Expect = 6e-09
 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 39/215 (18%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE------------LSIIACLR 402
           +LGRG FG V  A +  +G + A+K  K     K + +A                    R
Sbjct: 6   VLGRGHFGKVLLAEYKKTGELYAIKALK-----KGDIIARDEVESLMCEKRIFETANSER 60

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           H  LV L      +  +  V EY   G L   ++ D  +     +Y    +V+GL     
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFY-AACVVLGL----Q 115

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGY-------------LAPE 509
           YLH   E ++++RD+K  N++LD     ++ + F L    MG+             LAPE
Sbjct: 116 YLH---ENKIVYRDLKLDNLLLDTEGFVKI-ADFGLCKEGMGFGDRTSTFCGTPEFLAPE 171

Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            L   + T   D +  GV++ E+  G  P   + E
Sbjct: 172 VLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE 206

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 57.3 bits (138), Expect = 6e-09
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 33/208 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLR------HKNLV 407
           +G GA+G VYKA    SG   A+K  R + + +G    L+ +  +A L+      H N+V
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLP--LSTVREVALLKRLEAFDHPNIV 65

Query: 408 QLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           +L+  CA      + ++ LV+E++     D   Y D      L      +++      L 
Sbjct: 66  RLMDVCATSRTDRETKVTLVFEHVDQ---DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122

Query: 463 YLHQECEQQVIHRDIKASNIMLD-------ANFN-ARLES---SFTLTAGTMGYLAPEYL 511
           +LH  C   ++HRD+K  NI++        A+F  AR+ S   + T    T+ Y APE L
Sbjct: 123 FLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVL 179

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              T     D++S G +  E+   R+P+
Sbjct: 180 LQSTYATPVDMWSVGCIFAEMF-RRKPL 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 58.1 bits (140), Expect = 6e-09
 Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 33/221 (14%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R+LR     +   +++GRGAFG V      S+  V A+K  SK     +++   F  E  
Sbjct: 36  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW--YHRLNIV 454
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W  ++   +V
Sbjct: 96  IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVV 152

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------LTAG 501
           +    AL  +H       IHRD+K  N++LD + + +L    T                G
Sbjct: 153 L----ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 205

Query: 502 TMGYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRP 538
           T  Y++PE L+     G    + D +S GV + E+  G  P
Sbjct: 206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 57.7 bits (139), Expect = 7e-09
 Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTE-FLAELSIIACLRHKNLVQLL 410
           +LG+G+FG V  A    +  + A+K  K      +   E  + E  ++A       +  L
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQL 66

Query: 411 GWCAEK-GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             C +    L  V EY+  G L   + Q  +     + ++   I VGL     +LH    
Sbjct: 67  HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGL----FFLH---R 119

Query: 470 QQVIHRDIKASNIMLD-------ANFNARLESSF----TLT-AGTMGYLAPEYLQYGTAT 517
           + +I+RD+K  N+MLD       A+F    E       T T  GT  Y+APE + Y    
Sbjct: 120 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYG 179

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETE 544
           +  D ++YGV++ E+  G+ P + E E
Sbjct: 180 KSVDWWAYGVLLYEMLAGQPPFDGEDE 206

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 57.0 bits (137), Expect = 9e-09
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 34/201 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G++  VYK     +G + A+K  +   E  T F A  E S++  L+H N+V L    
Sbjct: 13  LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI---VVGLASALTYLHQECEQ 470
             K  L LV+EY+     D   Y D   G L    H  N+   +  L   L+Y+HQ   +
Sbjct: 73  HTKETLTLVFEYV---HTDLCQYMDKHPGGL----HPENVKLFLFQLLRGLSYIHQ---R 122

Query: 471 QVIHRDIKASNIMLD-------ANFN-ARLES----SFTLTAGTMGYLAPEYL----QYG 514
            ++HRD+K  N+++        A+F  AR +S    +++    T+ Y  P+ L    +Y 
Sbjct: 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYS 182

Query: 515 TATEKTDVFSYGVVVLEVACG 535
           T     D++  G + +E+  G
Sbjct: 183 TC---LDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 57.2 bits (139), Expect = 1e-08
 Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 49/213 (23%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---------FLAELSIIACLRHKNL 406
           LG+GA+G V+KA    +  V A+K+   +    T+         FL EL       H N+
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNI 69

Query: 407 VQLLG-WCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           V+LL    AE   ++ LV+EYM     +  L+      +L    H+  I+  L  AL Y+
Sbjct: 70  VKLLNVIKAENDKDIYLVFEYM-----ETDLHAVIRANILED-VHKRYIMYQLLKALKYI 123

Query: 465 HQECEQQVIHRDIKASNIMLD-------ANFN-ARLESSFTLTAG---------TMGYLA 507
           H      VIHRD+K SNI+L+       A+F  AR  S                T  Y A
Sbjct: 124 HS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180

Query: 508 PEYL----QYGTATEKTDVFSYGVVVLEVACGR 536
           PE L    +Y   T+  D++S G ++ E+  G+
Sbjct: 181 PEILLGSTRY---TKGVDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 36/218 (16%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLAELSIIACLRHK 404
           F   R+LG+G FG V      ++G + A K     R K    G+   L E  I+  +  +
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-GEAMALNEKQILEKVNSR 60

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------DSENGVLLSWYHRLNIVVGLA 458
            +V L      K  L LV   M  G L   +Y       D E  V    ++   I  GL 
Sbjct: 61  FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAV----FYAAEITCGL- 115

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYL 506
                LH+E   ++++RD+K  NI+LD   + R+ S   L              GT+GY+
Sbjct: 116 ---EDLHRE---RIVYRDLKPENILLDDYGHIRI-SDLGLAVEIPEGETIRGRVGTVGYM 168

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           APE ++    T   D +  G ++ E+  G+ P  +  E
Sbjct: 169 APEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 57.0 bits (137), Expect = 1e-08
 Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 39/213 (18%)

Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A          +     AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             L++   ++ 
Sbjct: 80  IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLD-------ANFN-AR----LESSFTLTAG 501
              +A  + YL     Q+ IHRD+ A N+++        A+F  AR    ++     T G
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196

Query: 502 TM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 57.4 bits (138), Expect = 1e-08
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 28/213 (13%)

Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           RS  + +    I+G G+FG VY+A    +    A+K+     + K     EL I+  L H
Sbjct: 62  RSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR---ELLIMKNLNH 118

Query: 404 KNLVQLLGW----CAEKGE----LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            N++ L  +    C +K E    L +V E++P      M +    N  L  +  +L    
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKL-YSY 177

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNA----RLESSFTLTAGTMG------- 504
            L  AL Y+H +    + HRD+K  N+++D N +        S+  L AG          
Sbjct: 178 QLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSR 234

Query: 505 -YLAPEYLQYGTA-TEKTDVFSYGVVVLEVACG 535
            Y APE +   T  T   D++S G ++ E+  G
Sbjct: 235 FYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267

Length = 440

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 39/212 (18%)

Query: 356 LGRGAFGNVYKAYFA--SSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG V K  +         A+K  K+ +E   + E + E  I+  L +  +V+++G
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSE-----NGVLLSWYHRLNIVVGLASALTYLHQ 466
            C E   L+LV E    G L++ L    +     N V L   H++++       + YL  
Sbjct: 63  VC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVEL--MHQVSM------GMKYLE- 112

Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMG-----YLAPEY 510
              +  +HRD+ A N++L     A++ S F L            A + G     + APE 
Sbjct: 113 --GKNFVHRDLAARNVLLVNQHYAKI-SDFGLSKALGADDSYYKARSAGKWPLKWYAPEC 169

Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRPIER 541
           + +   + ++DV+SYG+ + E  + G++P ++
Sbjct: 170 INFRKFSSRSDVWSYGITMWEAFSYGQKPYKK 201

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 56.5 bits (136), Expect = 1e-08
 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 36/214 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW- 412
           ++LG+G+FG V  A     G   AVK  K     K   L +   + C   +  V  L W 
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALK-----KDVVLID-DDVECTMVEKRVLALAWE 54

Query: 413 --------CA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
                   C    K  L  V E++  G L   +       +  + ++   IV GL     
Sbjct: 55  NPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGL----Q 110

Query: 463 YLHQECEQQVIHRDIKASNIMLD-------ANF-----NARLESSFTLTAGTMGYLAPEY 510
           +LH    + +I+RD+K  N+MLD       A+F     N   ++  +   GT  Y+APE 
Sbjct: 111 FLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           LQ    T   D +S+GV++ E+  G+ P   + E
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 56.3 bits (136), Expect = 2e-08
 Identities = 76/299 (25%), Positives = 119/299 (39%), Gaps = 56/299 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW- 412
           ++LG+G+FG V  A    +    A+K  K       + + E   + C   +  V  L W 
Sbjct: 1   KVLGKGSFGKVMLAELKGTNEFFAIKALK------KDVVLEDDDVECTMVERRVLALAWE 54

Query: 413 --------CA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
                   C    K  L  V EY+  G L   +          + ++   I+ GL     
Sbjct: 55  HPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGL----Q 110

Query: 463 YLHQECEQQVIHRDIKASNIMLD-------ANF-----NARLESSFTLTAGTMGYLAPEY 510
           +LH+   + +I+RD+K  N++LD       A+F     N   E   +   GT  Y+APE 
Sbjct: 111 FLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEI 167

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG---HKMVNLVDW--VWGLYAEGRII 565
           L+     E  D +S+GV++ E+  G+ P   E E      ++N       W       I 
Sbjct: 168 LKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRW-------IS 220

Query: 566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRV-FQILNN-EAEPLVVPKLK 622
           + A   L+  F  D  KRL + G      D    P  R + ++ L   E  P   PK+K
Sbjct: 221 KEAKDCLSKLFERDPTKRLGVDG------DIRQHPFFRGIDWERLEKREIPPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 56.4 bits (136), Expect = 2e-08
 Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 33/217 (15%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLV 407
           ++LG+G+FG V+   K     +G + A+K  K +      +     E  I+A + H  +V
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYL 464
           +L      +G+L L+ +++  G L   L ++   +E  V   +Y     +  LA AL +L
Sbjct: 62  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KFY-----LAELALALDHL 114

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYL 511
           H      +I+RD+K  NI+LD   + +L + F L+              GT+ Y+APE +
Sbjct: 115 HS---LGIIYRDLKPENILLDEEGHIKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 170

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
                T+  D +S+GV++ E+  G  P + +     M
Sbjct: 171 NRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM 207

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 61/256 (23%), Positives = 97/256 (37%), Gaps = 58/256 (22%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKN 405
           F S +++GRGAFG V       +G V A+K  + +     E      AE  I+       
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V++     +K  L L+ E++P G +  +L +        + ++    V+ + S    +H
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDS----IH 118

Query: 466 QECEQQVIHRDIKASNIMLDA-------------------------NFNARLESSFTL-- 498
           Q      IHRDIK  N++LD+                         N N  L S FT   
Sbjct: 119 Q---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN 175

Query: 499 --------------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                               T GT  Y+APE        +  D +S GV++ E+  G  P
Sbjct: 176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 539 IERETEGHKMVNLVDW 554
              ET       +++W
Sbjct: 236 FCSETPQETYKKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 22/196 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G++  VYK     +G + A+K      E    F A  E S++  L+H N+V L    
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             K  L  V+EYM     D   Y     G L  +  RL  +  L   L Y+H    Q ++
Sbjct: 73  HTKETLTFVFEYM---HTDLAQYMIQHPGGLHPYNVRL-FMFQLLRGLAYIHG---QHIL 125

Query: 474 HRDIKASNIMLD-------ANFN-ARLES----SFTLTAGTMGYLAPEYLQYGTA-TEKT 520
           HRD+K  N+++        A+F  AR +S    +++    T+ Y  P+ L   T  +   
Sbjct: 126 HRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSAL 185

Query: 521 DVFSYGVVVLEVACGR 536
           D++  G + +E+  G+
Sbjct: 186 DIWGAGCIFIEMLQGQ 201

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 35/217 (16%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHS---HEGKT--EFLAELSIIACLRHKN 405
           R+LG GA+G V+   K     +G + A+K  K +    + KT      E  ++  +R   
Sbjct: 6   RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65

Query: 406 LVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG-LASALTY 463
            +  L +  +   +L L+ +Y+  G L   LYQ  E+         + + +  +  AL +
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTE----SEVRVYIAEIVLALDH 120

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT--------------AGTMGYLAPE 509
           LHQ     +I+RDIK  NI+LD+  +  L + F L+               GT+ Y+APE
Sbjct: 121 LHQ---LGIIYRDIKLENILLDSEGHVVL-TDFGLSKEFLAEEEERAYSFCGTIEYMAPE 176

Query: 510 YLQYGTA--TEKTDVFSYGVVVLEVACGRRPIERETE 544
            ++ G+    +  D +S GV+  E+  G  P   + E
Sbjct: 177 VIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE 213

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 36/208 (17%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLLGW 412
           +GRGA+G V  A  + +    A+K+  ++ + + +    L E+ ++  L H+N++ +   
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 413 CAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
                     ++ +VYE M     D  L+Q   +   LS  H    +  L   L Y+H  
Sbjct: 73  MPPPHREAFNDVYIVYELM-----DTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS- 126

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARLESS----FTLTAGTMGYLAPEYL---- 511
               V+HRD+K SN++L+AN +        AR  S      T    T  Y APE L    
Sbjct: 127 --ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCS 184

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           +Y TA    DV+S G +  E+  GR+P+
Sbjct: 185 EYTTA---IDVWSVGCIFAELL-GRKPL 208

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 44/224 (19%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F   +++GRGAFG V       +  + A+K        K E L      AC R +  V +
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILN-----KWEMLKRAET-ACFREERNVLV 56

Query: 410 LGWCA----------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGL 457
            G C           ++  L LV +Y   G L  +L  ++D     +  +Y     +  +
Sbjct: 57  NGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFY-----IAEM 111

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------SFTLTAGTMG 504
             A+  +HQ      +HRDIK  N++LD N + RL                 ++  GT  
Sbjct: 112 VLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPD 168

Query: 505 YLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           Y++PE LQ      G    + D +S GV + E+  G  P   E+
Sbjct: 169 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 212

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (134), Expect = 4e-08
 Identities = 64/238 (26%), Positives = 91/238 (38%), Gaps = 60/238 (25%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           F   +++GRGAFG V+      +G V A+K  + S   K        AE  I+A      
Sbjct: 3   FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL----LSWYHRLNIVVGLASAL 461
           +V+L     ++  L LV EYMP G L  +L       V       +Y     +  L  AL
Sbjct: 63  IVKLYYSFQDEEHLYLVMEYMPGGDLMNLL---IRKDVFPEETARFY-----IAELVLAL 114

Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANF----------------NARLESSFTL 498
             +H+      IHRDIK  NI++D       A+F                N      F  
Sbjct: 115 DSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRD 171

Query: 499 ------------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                             T GT  Y+APE L+      + D +S GV++ E+  G  P
Sbjct: 172 NVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 55.2 bits (133), Expect = 4e-08
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 24/202 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELSI-IACLRHKNLVQ 408
           +++G+G+FG V  A   + G   AVK   K +   K E    +AE ++ +  ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L        +L  V +Y+  G L   L ++       + ++   I    ASAL YLH   
Sbjct: 61  LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEI----ASALGYLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTA 516
              +I+RD+K  NI+LD+  +  L              + +   GT  YLAPE L+    
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPY 173

Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
               D +  G V+ E+  G  P
Sbjct: 174 DRTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 55.0 bits (132), Expect = 4e-08
 Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 33/255 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQL 409
           R++GRG++  V       +  + A+K  K    H  E       E  +         +  
Sbjct: 1   RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60

Query: 410 LGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L  C +    L LV EY+  G  D M +   +    L   H       +  AL +LH   
Sbjct: 61  LHSCFQTTSRLFLVIEYVNGG--DLMFHMQRQRK--LPEEHARFYAAEICIALNFLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LDA+ + +L              + +   GT  Y+APE L+    
Sbjct: 114 ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEY 173

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI-------IEAAD 569
               D ++ GV++ E+  GR P +  T+   M N  D+++ +  E  I       ++A+ 
Sbjct: 174 GFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQVILEKPIRIPRFLSVKASH 232

Query: 570 KRLNGAFNEDEMKRL 584
             L G  N+D  +RL
Sbjct: 233 V-LKGFLNKDPKERL 246

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 54.7 bits (132), Expect = 4e-08
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 28/210 (13%)

Query: 349 GFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLR 402
               + +L  G FG ++                VK  K   S    T  L E  ++  L 
Sbjct: 7   RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS 66

Query: 403 HKNLVQLLGWCAEKGELLLV-YEYMPNGSLDRMLYQ----DSENGVLLSWYHRLNIVVGL 457
           H+N++ +L  C E GE   V Y YM  G+L   L Q    ++ N   LS    +++ + +
Sbjct: 67  HQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQI 126

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS------FTLTAGTMG------- 504
           A  ++YLH+   + VIH+DI A N ++D     ++  +      F +    +G       
Sbjct: 127 ACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPV 183

Query: 505 -YLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            ++A E L     +  +DV+S+GV++ E+ 
Sbjct: 184 KWMALESLVNKEYSSASDVWSFGVLLWELM 213

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 30/211 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQ 408
           ++LG+G+FG V+ A    +    A+K  K        + +   + +  +     H  L  
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K  L  V EY+  G L   +    +  +  + ++   I+ GL     +LH   
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGL----QFLHS-- 114

Query: 469 EQQVIHRDIKASNIMLD-------ANF-----NARLESSFTLTAGTMGYLAPEYL---QY 513
            + +++RD+K  NI+LD       A+F     N   ++      GT  Y+APE L   +Y
Sbjct: 115 -KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKY 173

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            T+    D +S+GV++ E+  G+ P     E
Sbjct: 174 NTS---VDWWSFGVLLYEMLIGQSPFHGHDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 54.1 bits (130), Expect = 8e-08
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 42/210 (20%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG-KTEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA    +    A+K  R +   EG  +  + E+S++  ++H N+V+L   
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL------NIVVGLASALTYLHQ 466
              +  L LV+EY     LD  L +  ++    +   RL       I+ G+A    Y H 
Sbjct: 70  VHSEKRLYLVFEY-----LDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA----YCHS 120

Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------------TMGYLAPEYL-- 511
               +V+HRD+K  N+++D   NA   + F L                T+ Y APE L  
Sbjct: 121 ---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG 177

Query: 512 --QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              Y T     D++S G +  E+   ++P+
Sbjct: 178 SRHYSTP---VDIWSVGCIFAEMV-NQKPL 203

Length = 294

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 54.4 bits (131), Expect = 8e-08
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 30/210 (14%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTE-FLAELSIIACL-RHKNLVQL 409
           +LG+G+FG V  A    +  + A+K  K      +   E  + E  ++A   +   L QL
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQL 66

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL---LSWYHRLNIVVGLASALTYLHQ 466
                    L  V EY+  G L   +Y   + G      + ++   I +GL     +LH 
Sbjct: 67  HSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGKFKEPHAVFYAAEIAIGL----FFLHS 119

Query: 467 ECEQQVIHRDIKASNIMLD-------ANFNARLESSF----TLT-AGTMGYLAPEYLQYG 514
              + +I+RD+K  N+MLD       A+F    E+ F    T T  GT  Y+APE + Y 
Sbjct: 120 ---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ 176

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETE 544
              +  D +++GV++ E+  G+ P + E E
Sbjct: 177 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 206

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 54.6 bits (131), Expect = 8e-08
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 17/162 (10%)

Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
           +EL  +A   H  +V+         +LLL+ EY   G L++ + Q  +  +    Y    
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGL 173

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIML---------DANFNARLESSFTLTA--- 500
           +   +  AL  +H      ++HRD+K++NI L         D  F+ +   S +L     
Sbjct: 174 LFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS 230

Query: 501 --GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
             GT  YLAPE  +    ++K D++S GV++ E+    RP +
Sbjct: 231 FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFK 272

Length = 478

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 1e-07
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 11/136 (8%)

Query: 357 GRGAFGNVYKAYF--ASSGSVAAVKRSKHSHEGKTEF----LAELSIIACLRHKNLVQLL 410
           GRG +G VYKA       G   A+K+ K   E  T        E++++  L+H+N+V L+
Sbjct: 9   GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLV 68

Query: 411 GWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
               E  +  + L+++Y  +     + +      V +      +++  + + + YLH   
Sbjct: 69  EVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH--- 125

Query: 469 EQQVIHRDIKASNIML 484
              V+HRD+K +NI++
Sbjct: 126 SNWVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173892 cd07308, lectin_leg-like, legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 60/231 (25%), Positives = 81/231 (35%), Gaps = 50/231 (21%)

Query: 32  FNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSF 91
             + N T+ G + +    I LT ++    S SGSL    P+P           F     F
Sbjct: 17  GEIGNWTVGGSTVITKNYIRLTPDV---PSQSGSLWSRVPIPA--------KDFEIEVEF 65

Query: 92  SINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKF--VAIEFDT-----R 144
           SI+       GDG AF+ + +    G   G            +KF  +AI FDT     +
Sbjct: 66  SIHG-GSGLGGDGFAFWYTEEPGSDGPLFG----------GPDKFKGLAIFFDTYDNDGK 114

Query: 145 LDPHF-----DDPDENHIGLDIDSLESIKTADPILQGIDLKSGN---VITAWIDYKNDLR 196
             P       D         D + LE        L    LK  N     T  I Y N+  
Sbjct: 115 GFPSISVFLNDGTKSYDYETDGEKLE--------LASCSLKFRNSNAPTTLRISYLNNT- 165

Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQS 247
            LKV ++YS          V   +   L    Y GFSA T   ++ H I S
Sbjct: 166 -LKVDITYSEGNNWKECFTVEDVI---LPSQGYFGFSAQTGDLSDNHDILS 212

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 218

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 53.7 bits (129), Expect = 1e-07
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)

Query: 354 RILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A     G        +V  +K S H+ E +   ++EL I++ L +HK
Sbjct: 44  KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDE-REALMSELKILSHLGQHK 102

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           N+V LLG C   G +L++ EY   G L   L + +E  +       + +     ++  Y 
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFV----MALPEISETSSDYK 158

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESS 495
           +   E++ I  D   S+   D     R  SS
Sbjct: 159 NITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 26/213 (12%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTE-FLAELSIIACLRHKN 405
           F+   +LG+G+FG V  A    +  + A+K  K      +   E  + E  ++A      
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61

Query: 406 LVQLLGWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +  L  C +  + L  V EY+  G L   +YQ  + G      H +     +A  L +L
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYQIQQVGRFKE-PHAVFYAAEIAIGLFFL 117

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYL 511
           H    + +I+RD+K  N+MLD+  + ++ + F +               GT  Y+APE +
Sbjct: 118 HS---KGIIYRDLKLDNVMLDSEGHIKI-ADFGMCKENMWDGVTTKTFCGTPDYIAPEII 173

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            Y    +  D +++GV++ E+  G+ P E E E
Sbjct: 174 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 206

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 52/215 (24%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG-KTEFLAELSIIACLRHKN-LVQLL 410
            +G G +G VYKA   ++G + A+K  R +   EG     L E+S++  L     +V+LL
Sbjct: 8   KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67

Query: 411 GWCAE-------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL------NIVVGL 457
               E       K  L LV+EY+     D   + DS           L      + +  L
Sbjct: 68  --DVEHVEEKNGKPSLYLVFEYL---DSDLKKFMDSNGR---GPGRPLPAKTIKSFMYQL 119

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLD--------ANFNARLESSFTLTAG-------T 502
              + + H+     V+HRD+K  N+++D        A+    L  +F++          T
Sbjct: 120 LKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG--LGRAFSIPVKSYTHEIVT 174

Query: 503 MGYLAPEYL----QYGTATEKTDVFSYGVVVLEVA 533
           + Y APE L     Y T     D++S G +  E++
Sbjct: 175 LWYRAPEVLLGSTHYSTP---VDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 26/248 (10%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSII-ACLRHKNLVQ 408
           +++G+G+FG V  A   S GS  AVK    ++    + +   +AE +++   L+H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L        +L  V +Y+  G L   L ++      L    R      +ASA+ YLH   
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGELFFHLQRER---CFLEPRARF-YAAEVASAIGYLHS-- 114

Query: 469 EQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTA 516
              +I+RD+K  NI+LD+  +  L            E + +   GT  YLAPE L+    
Sbjct: 115 -LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPY 173

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
               D +  G V+ E+  G  P           N++     L   G    AA   L G  
Sbjct: 174 DRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH--KPLQLPGGKTVAACDLLVGLL 231

Query: 577 NEDEMKRL 584
           ++D+ +RL
Sbjct: 232 HKDQRRRL 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 2e-07
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFL-AELSIIACLRHKN 405
           F S +++GRGAFG V       +G + A+K+ + S    + +   + AE  I+A   +  
Sbjct: 3   FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALT 462
           +V+L     ++  L L+ EY+P G +  +L +    +E      +Y     +     A+ 
Sbjct: 63  VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETR--FY-----IAETILAID 115

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG 501
            +H+      IHRDIK  N++LDA  + +L S F L  G
Sbjct: 116 SIHK---LGYIHRDIKPDNLLLDAKGHIKL-SDFGLCTG 150

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 26/248 (10%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTE--FLAELSII-ACLRHKNLVQ 408
           +++G+G+FG V  A   +     AVK  + K   + K E   ++E +++   ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L        +L  V +Y+  G L    Y        L    R      +ASAL YLH   
Sbjct: 61  LHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAAEIASALGYLHS-- 114

Query: 469 EQQVIHRDIKASNIMLDA-------NF-----NARLESSFTLTAGTMGYLAPEYLQYGTA 516
              +++RD+K  NI+LD+       +F     N     + +   GT  YLAPE L     
Sbjct: 115 -LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPY 173

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
               D +  G V+ E+  G  P           N+++    L  +  I  +A   L G  
Sbjct: 174 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--KPLQLKPNITNSARHLLEGLL 231

Query: 577 NEDEMKRL 584
            +D  KRL
Sbjct: 232 QKDRTKRL 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 31/204 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +G G FG V      S  + A V     R   S + + +FL E      L+H NL+Q LG
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL--NIVVGLASALTYLHQECE 469
            C E    LLV E+ P G L   L +      L++        +   +A  L +LH+   
Sbjct: 63  QCTEVTPYLLVMEFCPLGDLKGYL-RSCRKAELMTPDPTTLQRMACEIALGLLHLHK--- 118

Query: 470 QQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGYLAPEYLQ--Y 513
              IH D+   N +L A+   ++          +  + +T       + ++APE +   +
Sbjct: 119 NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178

Query: 514 GT-----ATEKTDVFSYGVVVLEV 532
           G       T++++V+S GV + E+
Sbjct: 179 GNLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 52.3 bits (126), Expect = 3e-07
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 39/213 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLL 410
             +G GA+G V  A    SG   A+K+  H+ +  T     L EL I+   +H N++ + 
Sbjct: 11  ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIR 70

Query: 411 GWCAEKGELL----LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                 G       +V + M +  L  +++ D      L+  H    +  L   L Y+H 
Sbjct: 71  DILRPPGADFKDVYVVMDLMES-DLHHIIHSDQP----LTEEHIRYFLYQLLRGLKYIHS 125

Query: 467 ECEQQVIHRDIKASNIMLDAN-------FN-ARLESSF--------TLTAGTMGYLAPEY 510
                VIHRD+K SN++++ +       F  AR  SS         T    T  Y APE 
Sbjct: 126 AN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPEL 182

Query: 511 L----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           L    +Y   T   D++S G +  E+  GRR +
Sbjct: 183 LLSLPEY---TTAIDMWSVGCIFAEM-LGRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (124), Expect = 5e-07
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLG 411
           +G+G+FG V +     +  + A+K  + +H       T  LAE +++A +    +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
                 +L LV  ++  G L   L ++    +  + ++   ++     AL  LH   +  
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLC----ALENLH---KFN 113

Query: 472 VIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYGTATEK 519
           VI+RD+K  NI+LD   +  L           +   T T  GT  YLAPE L     T+ 
Sbjct: 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA 173

Query: 520 TDVFSYGVVVLEVACGRRPIERE 542
            D ++ GV++ E+  G  P   E
Sbjct: 174 VDWWTLGVLLYEMLTGLPPFYDE 196

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 51.6 bits (123), Expect = 6e-07
 Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 36/298 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL----AELSII-ACLRHKNLVQ 408
           R++GRG++  V       +  + A+K  K       E +     E  +      H  LV 
Sbjct: 1   RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V EY+  G  D M +   +    L   H       ++ AL YLH   
Sbjct: 61  LHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRK--LPEEHARFYSAEISLALNYLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LD+  + +L              + +   GT  Y+APE L+    
Sbjct: 114 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 173

Query: 517 TEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRI-------IEAA 568
               D ++ GV++ E+  GR P +   +  +   N  D+++ +  E +I       ++AA
Sbjct: 174 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 233

Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
              L    N+D  +RL     +    D    P  R V   L  + +  VVP  KP ++
Sbjct: 234 SV-LKSFLNKDPKERLGCHPQT-GFADIQGHPFFRNVDWDLMEQKQ--VVPPFKPNIS 287

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 51.5 bits (123), Expect = 6e-07
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 48/223 (21%)

Query: 354 RILGRGAFGNVY---KAYFASSGSV---------AAVKRSKHSHEGKTEFLAELSIIACL 401
           ++LG GA+G V+   K     +G +         A V+++K     +TE     +++  +
Sbjct: 6   KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTE----RNVLEHV 61

Query: 402 RHKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVG- 456
           R    +  L +  + + +L L+ +Y+  G +   LYQ    SE+ V            G 
Sbjct: 62  RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEV--------RFYSGE 113

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGT 502
           +  AL +LH+     +++RDIK  NI+LD+  +  L              E +++   GT
Sbjct: 114 IILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSF-CGT 169

Query: 503 MGYLAPEYLQYGTATEK-TDVFSYGVVVLEVACGRRPIERETE 544
           + Y+APE ++      K  D +S G+++ E+  G  P   E E
Sbjct: 170 IEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 51.6 bits (123), Expect = 7e-07
 Identities = 58/256 (22%), Positives = 97/256 (37%), Gaps = 58/256 (22%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKN 405
           F S +++GRGAFG V       +G + A+K  + +     E      AE  I+       
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V++     +K  L L+ E++P G +  +L +        + ++    V+    A+  +H
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVL----AIDAIH 118

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE-------------------------SSFTL-- 498
           Q      IHRDIK  N++LDA  + +L                          S F+   
Sbjct: 119 Q---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN 175

Query: 499 --------------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                               T GT  Y+APE        +  D +S GV++ E+  G  P
Sbjct: 176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 539 IERETEGHKMVNLVDW 554
              ET       +++W
Sbjct: 236 FCSETPQETYRKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 51.8 bits (124), Expect = 7e-07
 Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 52/238 (21%)

Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFL 392
             +   + +  +R+LG GA G V  A   S G   AVK           K+  + +   L
Sbjct: 26  TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCL 85

Query: 393 AE---LSIIACLRHKNLVQLLGWCAEKGELL-LVYEYMPNGSLDRML---------YQDS 439
                 SI+ C  H++  +      E   ++ LV +Y   G L + +         +++ 
Sbjct: 86  LNCDFFSIVKC--HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREH 143

Query: 440 ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT 499
           E G+L        I V LA     +H    + +IHRDIK++NI+L +N   +L   F  +
Sbjct: 144 EAGLLF-------IQVLLA-----VHHVHSKHMIHRDIKSANILLCSNGLVKL-GDFGFS 190

Query: 500 ---------------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE 542
                           GT  Y+APE  +    ++K D+FS GV++ E+   +RP + E
Sbjct: 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE 248

Length = 496

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 25/149 (16%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF----------------LAELS 396
              LG G +G V KAY   +G + A+K+ K   E   +                 L EL 
Sbjct: 14  GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKII-EISNDVTKDRQLVGMCGIHFTTLRELK 72

Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           I+  ++H+N++ L+    E   + LV + M    L +++    +  + L+      I++ 
Sbjct: 73  IMNEIKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVV----DRKIRLTESQVKCILLQ 127

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLD 485
           + + L  LH+      +HRD+  +NI ++
Sbjct: 128 ILNGLNVLHK---WYFMHRDLSPANIFIN 153

Length = 335

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 51.0 bits (122), Expect = 1e-06
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 392 LAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL 451
           L E  ++  + H +++++           +V   +P+ S D   Y    +  L      L
Sbjct: 105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMV---LPHYSSDLYTYLTKRSRPL-PIDQAL 160

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLD------------ANFNARLESSFTLT 499
            I   +   L YLH    Q++IHRD+K  NI ++            A F   +  +F   
Sbjct: 161 IIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV-VAPAFLGL 216

Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           AGT+   APE L       K D++S G+V+ E+
Sbjct: 217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 33/200 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQLL 410
           +G GAFG V  A    +G   A+K  K      T  LA     EL ++  LRH+N++ L 
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIK--KIMKPFSTPVLAKRTYRELKLLKHLRHENIISLS 75

Query: 411 G-WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL---LSWYHRLNIVVGLASALTYLHQ 466
             + +   ++  V E +    L R+L     +  L      Y    I+ G    L Y+H 
Sbjct: 76  DIFISPLEDIYFVTELLGT-DLHRLL----TSRPLEKQFIQYFLYQILRG----LKYVHS 126

Query: 467 ECEQQVIHRDIKASNIMLDANFN--------ARL-ESSFTLTAGTMGYLAPE-YLQYGTA 516
                V+HRD+K SNI+++ N +        AR+ +   T    T  Y APE  L +   
Sbjct: 127 ---AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKY 183

Query: 517 TEKTDVFSYGVVVLEVACGR 536
             + D++S G +  E+  G+
Sbjct: 184 DVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 51.3 bits (122), Expect = 1e-06
 Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 39/234 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSV---AAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G FG V+      +       A+         K++ + E++++  L+HKN+V+ +  
Sbjct: 21  IGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDR 80

Query: 413 CAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE- 469
              K   +L ++ E+   G L R + +  +    +  +  ++I   L  AL Y H   + 
Sbjct: 81  FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG 140

Query: 470 ---QQVIHRDIKASNIMLDA-------------NFNAR---------------LESSFTL 498
              ++V+HRD+K  NI L               N N R               +ES    
Sbjct: 141 PNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHS 200

Query: 499 TAGTMGYLAPEYLQYGTAT--EKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
             GT  Y +PE L + T +  +K+D+++ G ++ E+  G+ P  +     ++++
Sbjct: 201 CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS 254

Length = 1021

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 37/211 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
             +G GA+G V  A    +G   A+K+       +   +T  L E+ I+   +H+N++ +
Sbjct: 11  SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRT--LREIKILRRFKHENIIGI 68

Query: 410 L-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L            ++ +V E M    L +++         LS  H    +  +   L Y+
Sbjct: 69  LDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQH-----LSNDHIQYFLYQILRGLKYI 122

Query: 465 HQECEQQVIHRDIKASNIMLDANFN--------ARL-----ESSFTLT--AGTMGYLAPE 509
           H      V+HRD+K SN++L+ N +        AR+     + +  LT    T  Y APE
Sbjct: 123 HS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPE 179

Query: 510 -YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
             L     T+  D++S G ++ E+    RP+
Sbjct: 180 IMLNSKGYTKAIDIWSVGCILAEMLSN-RPL 209

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 50.1 bits (119), Expect = 2e-06
 Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 44/224 (19%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F   +++GRGAFG V      ++  V A+K        K E L      AC R +  V +
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-----KWEMLKRAET-ACFREERDVLV 56

Query: 410 LG---WCA-------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGL 457
            G   W         ++  L LV +Y   G L  +L  ++D     +  +Y     +  +
Sbjct: 57  NGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFY-----LAEM 111

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------SFTLTAGTMG 504
             A+  +HQ      +HRDIK  NI++D N + RL                 ++  GT  
Sbjct: 112 VIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 168

Query: 505 YLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERET 543
           Y++PE LQ      G    + D +S GV + E+  G  P   E+
Sbjct: 169 YISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES 212

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 53/209 (25%), Positives = 81/209 (38%), Gaps = 55/209 (26%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR----HKNLVQLLG 411
           +G G F  V KA    +G   A+K  K   +   +    L  I  LR    H N+++L+ 
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVN-NLREIQALRRLSPHPNILRLIE 65

Query: 412 WCAEK--GELLLV--------YEYM-------PNGSLDRMLYQDSENGVLLSWYHRLNIV 454
              ++  G L LV        YE +       P   +   +YQ                 
Sbjct: 66  VLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQ----------------- 108

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLD------ANF-NARLESS---FTLTAGTMG 504
             L  +L ++H+     + HRDIK  NI++       A+F + R   S   +T    T  
Sbjct: 109 --LLKSLDHMHR---NGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRW 163

Query: 505 YLAPE-YLQYGTATEKTDVFSYGVVVLEV 532
           Y APE  L  G    K D+++ G V  E+
Sbjct: 164 YRAPECLLTDGYYGPKMDIWAVGCVFFEI 192

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 356 LGRGAFGNVY--KAYFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLVQLLG 411
           +G G FG V   + Y  +  +   VK  K +   K   EFL +      L+H N++Q LG
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQEC 468
            C E    LLV+EY   G L   L Q+     N  LL       +   +A+ +T++H+  
Sbjct: 63  QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ---RMACEIAAGVTHMHK-- 117

Query: 469 EQQVIHRDIKASNIMLDANFNARL 492
               +H D+   N  L ++   ++
Sbjct: 118 -HNFLHSDLALRNCFLTSDLTVKV 140

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 49.2 bits (118), Expect = 4e-06
 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 24/200 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQ 408
             +G GA+G V  A+   +G   A+K  K S   ++   A     EL ++  + H+N++ 
Sbjct: 21  SPVGSGAYGQVCSAFDTKTGRKVAIK--KLSRPFQSAIHAKRTYRELRLLKHMDHENVIG 78

Query: 409 LLGWCAEKGELLLVYE--YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           LL         L  ++  Y+    +   L    +   L S  H   +V  +   L Y+H 
Sbjct: 79  LLD-VFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKL-SDDHIQFLVYQILRGLKYIHS 136

Query: 467 ECEQQVIHRDIKASNIMLDAN-------FN-ARL-ESSFTLTAGTMGYLAPE-YLQYGTA 516
                +IHRD+K SNI ++ +       F  AR  +   T    T  Y APE  L +   
Sbjct: 137 ---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 193

Query: 517 TEKTDVFSYGVVVLEVACGR 536
            +  D++S G ++ E+  G+
Sbjct: 194 NQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 4e-06
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 31/153 (20%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIAC 400
           F   ++LG+G  G V+      +G + A+K         R+K         L E  I+A 
Sbjct: 3   FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKR-----VLTEQEILAT 57

Query: 401 LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG---- 456
           L H  L  L      +  L LV +Y P G L R+L    + G        L+  V     
Sbjct: 58  LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLL--QRQPG------KCLSEEVARFYA 109

Query: 457 --LASALTYLHQECEQQVIHRDIKASNIMLDAN 487
             +  AL YLH      +++RD+K  NI+L  +
Sbjct: 110 AEVLLALEYLHL---LGIVYRDLKPENILLHES 139

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 31/176 (17%)

Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
           F    S+++ + H +L  + G C    E ++V E++ +G LD  L ++    V ++W  +
Sbjct: 63  FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGR-VPVAW--K 119

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------TLTAGT 502
           + +   LASAL+YL    ++ ++H ++ A NI+L     A   S F        + TA +
Sbjct: 120 ITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS 176

Query: 503 -------MGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVAC--------GRRPIERE 542
                  + ++APE +  G + +   D +S+G  +LE+ C         R P E+E
Sbjct: 177 REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI-CFDGEVPLKERTPSEKE 231

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 48.7 bits (116), Expect = 5e-06
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 36/210 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSII-ACLRHKNLVQ 408
           R++GRG++  V       +  + A+K  K    +  E       E  +      H  LV 
Sbjct: 1   RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V E++  G L  M +   +    L   H       ++ AL +LH   
Sbjct: 61  LHSCFQTESRLFFVIEFVSGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNFLH--- 113

Query: 469 EQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEYLQ- 512
           E+ +I+RD+K  N++LDA  + +L                S+F    GT  Y+APE L+ 
Sbjct: 114 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTF---CGTPNYIAPEILRG 170

Query: 513 --YGTATEKTDVFSYGVVVLEVACGRRPIE 540
             YG +    D ++ GV++ E+  GR P +
Sbjct: 171 EDYGFS---VDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 48.3 bits (115), Expect = 8e-06
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA----ELSIIACLRHKN 405
           FH+ +++G+GAFG V       +G + A+K    S   K + LA    E  ++A      
Sbjct: 3   FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW 62

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRML--YQD-SENGVLLSWYHRLNIVVGLASALT 462
           +V L     +   L L+ E++P G L  ML  Y   SE+   ++ ++    V+ + +   
Sbjct: 63  VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSED---VTRFYMAECVLAIEA--- 116

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG 501
            +H+      IHRDIK  NI++D   + +L S F L+ G
Sbjct: 117 -VHK---LGFIHRDIKPDNILIDRGGHIKL-SDFGLSTG 150

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 48.2 bits (115), Expect = 8e-06
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 38/219 (17%)

Query: 349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLR- 402
            +   + LG+GA+G V  A  A +     V   K ++    + LA     EL ++   R 
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60

Query: 403 HKNLVQLLG----WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
           HKN+  L      +     EL L  E M     +  L+Q   +G  L+  H  + +  + 
Sbjct: 61  HKNITCLYDMDIVFPGNFNELYLYEELM-----EADLHQIIRSGQPLTDAHFQSFIYQIL 115

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------- 501
             L Y+H      V+HRD+K  N++++A+   ++   F L  G                 
Sbjct: 116 CGLKYIHS---ANVLHRDLKPGNLLVNADCELKI-CDFGLARGFSENPGENAGFMTEYVA 171

Query: 502 TMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           T  Y APE  L + + T+  DV+S G ++ E+  GR+P+
Sbjct: 172 TRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL-LGRKPV 209

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.9 bits (114), Expect = 8e-06
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 54/229 (23%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL--AELSIIACLRHKNLV 407
           F   +++GRGAFG V      ++G V A+K        K E L  AE    AC R +  V
Sbjct: 3   FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILN-----KWEMLKRAE---TACFREERDV 54

Query: 408 QLLG---WCA-------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVV 455
            + G   W         ++  L LV +Y   G L  +L  ++D     +  +Y     + 
Sbjct: 55  LVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFY-----LA 109

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE---SSFTLTA----------GT 502
            +  A+  +HQ      +HRDIK  N++LD N + RL    S   L A          GT
Sbjct: 110 EMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGT 166

Query: 503 MGYLAPEYLQ--------YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
             Y++PE LQ        YG    + D +S GV + E+  G  P   E+
Sbjct: 167 PDYISPEILQAMEDGKGRYGP---ECDWWSLGVCMYEMLYGETPFYAES 212

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 32/203 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLL 410
           + +G GA G V  A+    G   AVK+     + +T       EL ++ C+ HKN++ LL
Sbjct: 27  KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 86

Query: 411 G------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IVVGLASALTY 463
                     E  ++ LV E M + +L ++++ + +       + R++ ++  +   + +
Sbjct: 87  NVFTPQKSLEEFQDVYLVMELM-DANLCQVIHMELD-------HERMSYLLYQMLCGIKH 138

Query: 464 LHQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLT--AGTMGYLAPEYLQ 512
           LH      +IHRD+K SNI         +LD        ++F +T    T  Y APE + 
Sbjct: 139 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL 195

Query: 513 YGTATEKTDVFSYGVVVLEVACG 535
                E  D++S G ++ E+  G
Sbjct: 196 GMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)

Query: 358 RGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWC 413
           RGAFG VY     ++  + AVK  K +         +  AE   +A  +   +V L    
Sbjct: 14  RGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL 73

Query: 414 AEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                + LV EY+  G +  +L    Y D E  V          +  +A AL YLH+   
Sbjct: 74  QSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAV--------KYISEVALALDYLHR--- 122

Query: 470 QQVIHRDIKASNIMLDANFNARLESSFTLTAGTM 503
             +IHRD+K  N+++    + +L + F L+  T+
Sbjct: 123 HGIIHRDLKPDNMLISNEGHIKL-TDFGLSKVTL 155

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 32/202 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACLRHKNLVQLLG- 411
           +G GA G V  AY A      A+K+     + +T       EL ++ C+ HKN++ LL  
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91

Query: 412 WCAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IVVGLASALTYLH 465
           +  +K      ++ +V E M + +L +++  + +       + R++ ++  +   + +LH
Sbjct: 92  FTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLLYQMLCGIKHLH 143

Query: 466 QECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TMGYLAPEYLQYG 514
                 +IHRD+K SNI++ ++   + L+     TAG          T  Y APE +   
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200

Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              E  D++S G ++ E+  G 
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 35/211 (16%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHS---HEGKT--EFLAELSIIACLRHKN 405
           ++LG GA+G V+   K     SG + A+K  K +    + KT      E  ++  +R   
Sbjct: 6   KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65

Query: 406 LVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG-LASALTY 463
            +  L +  +   +L L+ +Y+  G L   L Q             + I  G +  AL +
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK-----EQEVQIYSGEIVLALEH 120

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT--------------AGTMGYLAPE 509
           LH+     +I+RDIK  NI+LD+N +  L + F L+               GT+ Y+AP+
Sbjct: 121 LHK---LGIIYRDIKLENILLDSNGHVVL-TDFGLSKEFHEDEVERAYSFCGTIEYMAPD 176

Query: 510 YLQYGTA--TEKTDVFSYGVVVLEVACGRRP 538
            ++ G     +  D +S GV++ E+  G  P
Sbjct: 177 IVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 47.3 bits (112), Expect = 2e-05
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)

Query: 354 RILGRGAFGNVYK--AYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           RILG GAFG V +  AY  S        +V  +K +  S E K   ++EL I+  L  H 
Sbjct: 43  RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE-KQALMSELKIMTHLGPHL 101

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN 441
           N+V LLG C + G + ++ EY   G L   L+++ +N
Sbjct: 102 NIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDN 138

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 37/215 (17%)

Query: 355 ILGRG--AFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++GRG      V  A +  +G    V+R      ++E  T    EL +     H N+V  
Sbjct: 5   VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPY 64

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                   EL +V  +M  GS   ++   + D  + + +++     I+ G+  AL Y+H 
Sbjct: 65  RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAY-----ILQGVLKALDYIHH 119

Query: 467 ECEQQVIHRDIKASNIMLDAN---FNARLESSFTL----------------TAGTMGYLA 507
                 +HR +KAS+I++  +   + + L S+ ++                +   + +L+
Sbjct: 120 ---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLS 176

Query: 508 PEYLQYGTA--TEKTDVFSYGVVVLEVACGRRPIE 540
           PE LQ        K+D++S G+   E+A G  P +
Sbjct: 177 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 56/225 (24%)

Query: 340 YRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----E 394
           YR+L+           +G GA+G V  A    +G+  A+K  K     ++E  A     E
Sbjct: 17  YRDLKQ----------VGSGAYGTVCSALDRRTGAKVAIK--KLYRPFQSELFAKRAYRE 64

Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDR-------MLYQDSENGVLLSW 447
           L ++  ++H+N++ LL              + P+ SLDR       M +  ++ G L+  
Sbjct: 65  LRLLKHMKHENVIGLLD------------VFTPDLSLDRFHDFYLVMPFMGTDLGKLMK- 111

Query: 448 YHRLN------IVVGLASALTYLHQECEQQVIHRDIKASNI---------MLDANFNARL 492
           + +L+      +V  +   L Y+H      +IHRD+K  N+         +LD     + 
Sbjct: 112 HEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168

Query: 493 ESSFTLTAGTMGYLAPEY-LQYGTATEKTDVFSYGVVVLEVACGR 536
           +S  T    T  Y APE  L +   T+  D++S G ++ E+  G+
Sbjct: 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 24/124 (19%)

Query: 422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN 481
           +Y +M + + D   ++D      L    R  I+  L  A+ Y+H   ++++IHRDIK  N
Sbjct: 249 LYSFMYDEAFD---WKDRP----LLKQTR-AIMKQLLCAVEYIH---DKKLIHRDIKLEN 297

Query: 482 IMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTATEKTDVFSYGVV 528
           I L+ +    L    T                GT+   +PE L      E TD++S G++
Sbjct: 298 IFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI 357

Query: 529 VLEV 532
           +L++
Sbjct: 358 LLDM 361

Length = 501

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 32/198 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLLG- 411
           +G GA G V  AY A      A+K+     + +T       EL ++ C+ HKN++ LL  
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84

Query: 412 -----WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IVVGLASALTYLH 465
                   E  ++ LV E M + +L +++  + +       + R++ ++  +   + +LH
Sbjct: 85  FTPQKSLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLLYQMLCGIKHLH 136

Query: 466 QECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TMGYLAPEYLQYG 514
                 +IHRD+K SNI++ ++   + L+     TAG          T  Y APE +   
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193

Query: 515 TATEKTDVFSYGVVVLEV 532
              E  D++S G ++ E+
Sbjct: 194 GYKENVDIWSVGCIMGEM 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 45.7 bits (108), Expect = 4e-05
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 354 RILGRGAFGNV--------YKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V        +K+  A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 41  KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHI 99

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSL 431
           N+V LLG C   G  L++ EY   G L
Sbjct: 100 NIVNLLGACTVGGPTLVITEYCCYGDL 126

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.9 bits (106), Expect = 5e-05
 Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 6/94 (6%)

Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
           F    S++  + HK++V L G C    E ++V E++  G LD  +++ S+   +L+   +
Sbjct: 51  FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSD---VLTTPWK 107

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML 484
             +   LASAL+YL    ++ ++H ++   NI+L
Sbjct: 108 FKVAKQLASALSYLE---DKDLVHGNVCTKNILL 138

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 45.4 bits (107), Expect = 6e-05
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 27/159 (16%)

Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           E  I+  + H +++QL G         L+   +P    D   Y  ++  + +     L I
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLI---LPRYKTDLYCYLAAKRNIAIC--DILAI 187

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLD-------ANFNARL------ESSFTLTA 500
              +  A+ YLH   E ++IHRDIKA NI ++        +F A         + +   A
Sbjct: 188 ERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWA 244

Query: 501 GTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGR 536
           GT+   APE L    YG A    D++S G+V+ E+A   
Sbjct: 245 GTIATNAPELLARDPYGPA---VDIWSAGIVLFEMATCH 280

Length = 391

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 21/212 (9%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSG-SVAAVKRSKHSHEGKTE----FLAEL 395
           R+ +     F+  R LG G+FG V  A + +      A+KR + S   K +      +E 
Sbjct: 23  RKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSER 82

Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            I+  + H   V L G   ++  L LV E++  G     L ++      +  ++   IV+
Sbjct: 83  KILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVL 142

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYL 506
                  YL       +++RD+K  N++LD +         F   +++      GT  Y+
Sbjct: 143 ----IFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYI 195

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           APE L      +  D ++ G+ + E+  G  P
Sbjct: 196 APEILLNVGHGKAADWWTLGIFIYEILVGCPP 227

Length = 340

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 44.8 bits (106), Expect = 8e-05
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 33/207 (15%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLG 411
           ++G+G++G V  A    +G   A+K+     E     T  L E+ ++  LRH ++V++  
Sbjct: 7   VIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKH 66

Query: 412 WC-----AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                   E  ++ +V+E M     +  L+Q  +    L+  H    +  L  AL Y+H 
Sbjct: 67  IMLPPSRREFKDIYVVFELM-----ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT 121

Query: 467 ECEQQVIHRDIKASNIMLDANFN--------ARLESSFTLTA-------GTMGYLAPEYL 511
                V HRD+K  NI+ +A+          AR+  + T TA        T  Y APE  
Sbjct: 122 ---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 178

Query: 512 Q--YGTATEKTDVFSYGVVVLEVACGR 536
              +   T   D++S G +  EV  G+
Sbjct: 179 GSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 44.6 bits (105), Expect = 9e-05
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 34/207 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSII-ACLRH 403
           +++G+G+FG V  A     G   AVK         R +  H      +AE +++   ++H
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKH-----IMAERNVLLKNVKH 55

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
             LV L        +L  V +++  G L   L ++       + ++       +ASAL Y
Sbjct: 56  PFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFY----AAEIASALGY 111

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYL 511
           LH      +++RD+K  NI+LD+  +  L              + T   GT  YLAPE +
Sbjct: 112 LHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVI 168

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
           +        D +  G V+ E+  G  P
Sbjct: 169 RKQPYDNTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 44.3 bits (104), Expect = 1e-04
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 82

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL---LSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 83  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 138

Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 139 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 196

Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 197 QTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 32/202 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  AY        AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRT--YRELRLLKHMKHENVIGLL 80

Query: 411 ------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                        E+ LV   M    L+ ++         LS  H   ++  L   L Y+
Sbjct: 81  DVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQK-----LSDEHVQFLIYQLLRGLKYI 134

Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYG 514
           H      +IHRD+K SN+         +LD     + +   T    T  Y APE  L + 
Sbjct: 135 HS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWM 191

Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  G+
Sbjct: 192 HYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 354 RILGRGAFGNVYKA------YFASSGSVAA--VKRSKHSHEGKTEFLAELSIIACL-RHK 404
           R LG GAFG V +A      +  S+  VA   +K +  S E K   ++EL I++ L  H 
Sbjct: 43  RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSE-KQALMSELKIMSHLGPHL 101

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD 438
           N+V LLG C + G + ++ EY   G L   L+++
Sbjct: 102 NIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN 135

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEGKT-----EFLAELSIIA 399
               ++LG GAFG V +A        SS +  AVK  K   EG T       ++EL I+ 
Sbjct: 9   LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLK---EGATASEHKALMSELKILI 65

Query: 400 CL-RHKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRML 435
            +  H N+V LLG C +  G L+++ E+   G+L   L
Sbjct: 66  HIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)

Query: 356 LGRGAFGN---VYKAYFASSGSVAAVKRS---KHSHEGKTEFLAELSIIACLRHKNLVQL 409
           +GRG F N   VY A    +G++  V+ +     + E       E+ +    RH N++  
Sbjct: 6   IGRG-FCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTS 64

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                    L ++  +M  GS + +L   + +  +  L+      NI+ G    L YLHQ
Sbjct: 65  WTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIG-----NILFGALRGLNYLHQ 119

Query: 467 ECEQQVIHRDIKASNIMLDANF------------------NARLESSF-TLTAGTMGYLA 507
                 IHR+IKAS+I++  +                    A++   F   +   + +L+
Sbjct: 120 ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS 176

Query: 508 PEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIE 540
           PE L+   YG    K+D++S G+   E+A GR P +
Sbjct: 177 PELLRQDLYGYNV-KSDIYSVGITACELATGRVPFQ 211

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.3 bits (102), Expect = 3e-04
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 17/91 (18%)

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLD-------ANFNA-------RLESSFTLTAGT 502
           L SA+ Y+H E    +IHRDIK  N++++        +F A                AGT
Sbjct: 269 LLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGT 325

Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +   APE L     T   D++S G+V+ E A
Sbjct: 326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356

Length = 461

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 42.7 bits (100), Expect = 4e-04
 Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 22/174 (12%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIAC 400
           F   + LG GAFG V  A    + ++ A+K         R++ +H       AE  I+A 
Sbjct: 3   FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAH-----VKAERDILAE 57

Query: 401 LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA 460
             ++ +V+L     +K  L  V +Y+P G +  +L +    G+      R  I   L  A
Sbjct: 58  ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR---MGIFPEDLARFYIA-ELTCA 113

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
           +  +H+      IHRDIK  NI++D + + +L + F L  G       +Y Q G
Sbjct: 114 VESVHK---MGFIHRDIKPDNILIDRDGHIKL-TDFGLCTGFRWTHDSKYYQSG 163

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 33/202 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQLL 410
           +G GA+G+V  A    +G   A+K  K S   ++E  A     EL+++  ++H+N++ LL
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIK--KLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL 80

Query: 411 GWCA------EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  +  LV  YM       M +  SE+ V    Y  L         L Y+
Sbjct: 81  DVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQML-------CGLKYI 133

Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPEY-LQYG 514
           H      +IHRD+K  N+         +LD       ++  T    T  Y APE  L + 
Sbjct: 134 HS---AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWM 190

Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  G+
Sbjct: 191 HYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 42.4 bits (100), Expect = 5e-04
 Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 50/213 (23%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLL 410
           + +G GA G V  AY   +G   A+K+     +  T       EL ++  + HKN++ LL
Sbjct: 22  KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLL 81

Query: 411 GW------CAEKGELLLVYEYMPNGSL----------DRMLYQDSENGVLLSWYHRLNIV 454
                     E  ++ LV E M + +L          +RM Y       LL  Y  L   
Sbjct: 82  NVFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHERMSY-------LL--YQML--- 128

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLT--AGTM 503
                 + +LH      +IHRD+K SNI         +LD        +SF +T    T 
Sbjct: 129 ----CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 181

Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y APE +      E  D++S G ++ E+  G 
Sbjct: 182 YYRAPEVILGMGYKENVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 15/94 (15%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEGKTE-----FLAELSIIACL-R 402
           + LGRGAFG V +A       ++S    AVK  K   EG T       + EL I+  +  
Sbjct: 13  KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLK---EGATASEYKALMTELKILIHIGH 69

Query: 403 HKNLVQLLGWCAEK-GELLLVYEYMPNGSLDRML 435
           H N+V LLG C +  G L+++ EY   G+L   L
Sbjct: 70  HLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 42.3 bits (99), Expect = 6e-04
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKH--SHEGKTEFLAELSIIACLRHKNLVQL 409
           + LG GAFG V  A    + ++ A+K  R K   +        AE  I+A   ++ +V+L
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL 66

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                +K  L  V +Y+P G +  +L +      +L+ ++    +  L  A+  +H+   
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFY----IAELTLAIESVHK--- 119

Query: 470 QQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGT 515
              IHRDIK  NI++D + + +L + F L  G       +Y Q G+
Sbjct: 120 MGFIHRDIKPDNILIDLDGHIKL-TDFGLCTGFRWTHNSKYYQKGS 164

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 41.7 bits (98), Expect = 9e-04
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIACLRHK 404
           + +G GAFG V       + ++ A+K         R++ +H       AE  I+A   ++
Sbjct: 7   KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAH-----VKAERDILAEADNE 61

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +V+L     +K  L  V +Y+P G +  +L +    G+      R  I   L  A+  +
Sbjct: 62  WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIA-ELTCAIESV 117

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG 501
           H+      IHRDIK  NI++D + + +L + F L  G
Sbjct: 118 HK---MGFIHRDIKPDNILIDRDGHIKL-TDFGLCTG 150

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 62/263 (23%), Positives = 94/263 (35%), Gaps = 89/263 (33%)

Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 15  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 74

Query: 408 QLLGWCAEKGELLLVY------------------EYMPNGSLDRMLYQDSENGVLLS--W 447
            LLG C + G  L+V                   E++P  + D    Q       +S   
Sbjct: 75  NLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDL 134

Query: 448 YHRLNIVVGLASA----------------------------LTYLHQEC----------- 468
             RL+ +    S+                            LT     C           
Sbjct: 135 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEF 194

Query: 469 --EQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTA---------- 516
              ++ IHRD+ A NI+L  N N      F L      Y  P+Y++ G A          
Sbjct: 195 LASRKCIHRDLAARNILLSEN-NVVKICDFGLARDI--YKDPDYVRKGDARLPLKWMAPE 251

Query: 517 -------TEKTDVFSYGVVVLEV 532
                  T ++DV+S+GV++ E+
Sbjct: 252 TIFDRVYTIQSDVWSFGVLLWEI 274

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 26/148 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR--SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           R LG G+ G V+ A  +      AVK+         K   L E+ II  L H N+V++  
Sbjct: 11  RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVK-HALREIKIIRRLDHDNIVKVYE 69

Query: 412 WCAEKGE--------------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
                G               + +V EYM    L  +L    E G L   + RL  +  L
Sbjct: 70  VLGPSGSDLTEDVGSLTELNSVYIVQEYM-ETDLANVL----EQGPLSEEHARL-FMYQL 123

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLD 485
              L Y+H      V+HRD+K +N+ ++
Sbjct: 124 LRGLKYIHS---ANVLHRDLKPANVFIN 148

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	645
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	100.0
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.98
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.98
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.98
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.98
PHA03210	501	serine/threonine kinase US3; Provisional	99.98
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.98
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.98
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
KOG0586	596	consensus Serine/threonine protein kinase [General	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.95
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.95
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.92
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.92
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.91
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.91
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.89
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.89
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.89
PRK09188	365	serine/threonine protein kinase; Provisional	99.82
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.81
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.8
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.77
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.77
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.76
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.74
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.74
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.73
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.71
PRK10345	210	hypothetical protein; Provisional	99.7
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.69
PRK12274	218	serine/threonine protein kinase; Provisional	99.69
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.68
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.68
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.65
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.63
smart00090	237	RIO RIO-like kinase.	99.58
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.58
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.57
PRK14879	211	serine/threonine protein kinase; Provisional	99.57
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.55
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.53
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.53
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.52
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.5
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.5
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.49
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.41
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.39
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.37
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.25
KOG3839	351	consensus Lectin VIP36, involved in the transport	99.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.1
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.05
KOG1243	690	consensus Protein kinase [General function predict	99.05
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.02
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.97
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.91
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.9
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	98.8
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.78
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.74
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	98.68
KOG3087	229	consensus Serine/threonine protein kinase [General	98.68
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.67
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.47
COG4248	637	Uncharacterized protein with protein kinase and he	98.46
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.35
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.19
PRK09902	216	hypothetical protein; Provisional	98.17
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.04
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.02
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.0
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.79
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.69
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.65
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.52
PF01636	239	APH: Phosphotransferase enzyme family This family	97.47
PLN02876	822	acyl-CoA dehydrogenase	97.46
PRK10593	297	hypothetical protein; Provisional	97.45
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.43
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.43
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.34
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.12
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.0
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.91
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.88
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.75
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.72
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.71
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.37
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.35
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.3
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.28
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.25
PRK05231	319	homoserine kinase; Provisional	95.65
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.58
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.55
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.31
PLN02756	418	S-methyl-5-thioribose kinase	95.03
PLN02236	344	choline kinase	94.82
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.17
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.13
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	93.92
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.79
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	93.04
KOG2268	465	consensus Serine/threonine protein kinase [Signal	92.76
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	92.48

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-55  Score=463.57  Aligned_cols=278  Identities=45%  Similarity=0.790  Sum_probs=249.8

Q ss_pred             CCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch-hHhHHHHHHHHhhcCCCCeeeeeee
Q 041096          334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG-KTEFLAELSIIACLRHKNLVQLLGW  412 (645)
Q Consensus       334 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~-~~~~~~Ei~~l~~l~H~niv~l~g~  412 (645)
                      ..+.|+|+||+.||++|...++||+|+||.||+|.+.+ +..||||++...... .++|.+|++++.+++|||+|+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            56789999999999999999999999999999999986 489999988775544 6779999999999999999999999


Q ss_pred             eeeCC-eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          413 CAEKG-ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       413 ~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      |.+.+ +.+||||||++|+|.++|+.....  +++|.+|++|+.++|+||+|||+.+.++|+||||||+|||||+++++|
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK  217 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK  217 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence            99998 599999999999999999876543  699999999999999999999999988999999999999999999999


Q ss_pred             eeccc----ccc---------ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          492 LESSF----TLT---------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       492 l~d~~----~~~---------~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      ++|..    ...         .||.+|+|||+...+..++|+|||||||+|+||++|+.|.+... ......+.+|++..
T Consensus       218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~  296 (361)
T KOG1187|consen  218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPL  296 (361)
T ss_pred             ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHH
Confidence            98821    111         79999999999999999999999999999999999999887543 23344589999999


Q ss_pred             hccCchhHHhhhhcc-CCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          559 YAEGRIIEAADKRLN-GAFNE-DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      +.++++.+++|+++. +.++. +++..+..+++.|++.+|.+||+|.||+++|+.....
T Consensus       297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            999999999999997 66665 7899999999999999999999999999999655443

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=100.00  E-value=2.1e-54  Score=431.76  Aligned_cols=228  Identities=48%  Similarity=0.789  Sum_probs=207.6

Q ss_pred             eeEEeCCCCC--CCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCC
Q 041096           25 MNFDFTSFNL--RNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSF  101 (645)
Q Consensus        25 ~~f~~~~f~~--~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  101 (645)
                      ++|+|++|+.  .+|+|+|+|.+. ++.|+||++.. ..+++|||+|++||+||++.+++++||+|+|+|+|.+.+...+
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~-~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~   79 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTS-PASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLG   79 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCC-CCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCC
Confidence            4799999985  799999999998 89999999732 2678999999999999999999999999999999998776788


Q ss_pred             CCceEEEEecCCCCC-CCCCCccccccCCCC--CCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccc
Q 041096          102 GDGLAFFISPDNQIL-GSAGGCLGLVNSSQL--TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGID  178 (645)
Q Consensus       102 g~G~aF~l~p~~~~~-~~~g~~lGl~~~~~~--~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~  178 (645)
                      ||||||+|+|....+ +..|++|||++..++  +.+++|||||||++|.+++||++||||||+|++.|..+..+....++
T Consensus        80 gdGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~~~~~~~~  159 (236)
T cd06899          80 GDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDDDGGK  159 (236)
T ss_pred             CCeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeecccccccc
Confidence            999999999987744 588999999987665  45899999999999999999999999999999999888777665666


Q ss_pred             cCCCCeEEEEEEecCCCceEEEEEEeCC-CCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeec
Q 041096          179 LKSGNVITAWIDYKNDLRMLKVFMSYSN-LKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS  253 (645)
Q Consensus       179 ~~~g~~~~~~I~Y~~~~~~l~v~~~~~~-~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~  253 (645)
                      +.+|+.++|||+||+.+++|+|+|++.. .+|..|+++.++||+.+|+++|||||||+||...|.|+|++|+|+++
T Consensus       160 l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         160 LKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSN  235 (236)
T ss_pred             ccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEEcC
Confidence            8899999999999999999999999765 37889999999999999999999999999999999999999999975

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=100.00  E-value=1.7e-52  Score=419.21  Aligned_cols=226  Identities=46%  Similarity=0.755  Sum_probs=200.6

Q ss_pred             ceeEEeCCC-CCCCeEEecceEe-eCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC--CCC
Q 041096           24 NMNFDFTSF-NLRNITLLGDSYL-RNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV--NPS   99 (645)
Q Consensus        24 ~~~f~~~~f-~~~~~~l~G~a~~-~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~--~~~   99 (645)
                      +++|+|++| +..+++|+|+|.+ .++.|+||+...  .+++|||+|++||+|||+.+++++||+|+|+|+|...  ...
T Consensus         1 ~~~F~~~~F~~~~~~~l~G~A~~~~~~~l~LT~~~~--~~~~G~~~y~~pi~l~d~~~~~~~sF~t~F~f~i~~~~~~~~   78 (236)
T PF00139_consen    1 SVSFSFPSFSNSSNLTLNGDASISSNGSLQLTPDST--NNQAGRAWYNNPIQLWDSTTGNVASFSTSFSFSITNGPGSSN   78 (236)
T ss_dssp             EEEEEESSBTTGTTEEEEETEEEETTSEEESSTBET--SSEEEEEEESSEEESBETTTTEBEEEEEEEEEEEEESSSSSS
T ss_pred             CceEEcCCCCCCCceEEEeeEEeccCCeEEcCCCCC--CCcEEEEEECCcEEEeCCCCcceeeeeeEEEEEEeccCCCCc
Confidence            368999999 5899999999998 789999999732  3799999999999999999999999999999999653  567


Q ss_pred             CCCCceEEEEecCCCCC-CCCCCccccccCCCCC--CCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCC---
Q 041096          100 SFGDGLAFFISPDNQIL-GSAGGCLGLVNSSQLT--KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPI---  173 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~~-~~~g~~lGl~~~~~~~--~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~---  173 (645)
                      .+||||||||+|....+ ++.|++||+++..+.+  .++.|||||||++|++++||++|||||++|++.|..+.++.   
T Consensus        79 ~~~dGlAFvi~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~vAVEFDT~~N~~~~d~~~nHIgI~~n~~~s~~~~~~~~~~  158 (236)
T PF00139_consen   79 NGGDGLAFVIQPDPNLPGGSSGGYLGLFNSSTDGNGINNSVAVEFDTYKNPEYNDPDDNHIGIDVNSVVSNKTASAGYYS  158 (236)
T ss_dssp             S-BEEEEEEEEETTSSTTTSSGGGTTTSSSSSTTGGGGCEEEEEEETSTCGGGTTTSSSEEEEEESSSSESEEEE----E
T ss_pred             cCCCceEEEEecCcccccCCCCCccCccccccCCCccCcEEEEEEeeeecccccccCCCEEEEECCCCcccccccccccc
Confidence            88999999999998643 5699999999876654  58999999999999999999999999999999998876543   


Q ss_pred             ccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeee
Q 041096          174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ  251 (645)
Q Consensus       174 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~  251 (645)
                      ....++.+|+.++|||+||+.+++|+|+|+....+|..|+++..+||+.+|+++||||||||||...|.|.|++|+|+
T Consensus       159 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~~l~~~vdL~~~l~~~v~vGFsasTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  159 SPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNSSKPSSPVLSVNVDLSAVLPEQVYVGFSASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEEHHHGTTSEEEEEEEEETTTTEEEEEEEETTTTSEEEEEEEE--HHHHSCSEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred             cccccccCCcEEEEEEEEcCCccEEEEEEecccCCCcceeEEEEEchHHhcCCCcEEEEEeecCCCcceEEEEEEEeC
Confidence            345678999999999999999999999999776789999999999999999999999999999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-45  Score=383.07  Aligned_cols=238  Identities=33%  Similarity=0.505  Sum_probs=203.4

Q ss_pred             CceeccCCceEEEEEEECCCCeE-EEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-eEEEEEecCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSV-AAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKG-ELLLVYEYMP  427 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~-vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~  427 (645)
                      .+.||+|+||+||+|.+.  |.. ||||++.....   ..++|.+|+.+|.+++|||||+++|.|.+.. .++||||||+
T Consensus        46 ~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            455999999999999998  455 99999887332   2568999999999999999999999999987 7999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC-eeeCCCCCCcEEEcCCC-Ceeeecc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ-VIHRDIKASNIMLDANF-NARLESS----------  495 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlkp~NIlld~~~-~~kl~d~----------  495 (645)
                      +|+|.++|+..  ....++|..+++++.|||+||.|||+   .+ ||||||||+||||+.++ .+||+|.          
T Consensus       124 ~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  124 GGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             CCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence            99999999874  22349999999999999999999999   66 99999999999999997 9999882          


Q ss_pred             --ccccccCCcccCccccc--CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          496 --FTLTAGTMGYLAPEYLQ--YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       496 --~~~~~gt~~y~APE~~~--~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                        .+...||+.|||||++.  ...|+.|+|||||||+||||+||+.||......    ..            ...++...
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~----~~------------~~~v~~~~  262 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV----QV------------ASAVVVGG  262 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH----HH------------HHHHHhcC
Confidence              12257999999999999  569999999999999999999999999875431    11            12233344


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .+...+..+...+..++..||+.||.+||++.+++..|+...
T Consensus       263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM  304 (362)
T ss_pred             CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence            555666778899999999999999999999999999998553

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-45  Score=383.77  Aligned_cols=250  Identities=30%  Similarity=0.473  Sum_probs=217.1

Q ss_pred             cccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      ..+..++++.       .+.||+|.||.||.|.+.. ...||+|.++......+.|.+|+++|++|+|+|||+++|+|..
T Consensus       201 wei~r~~l~l-------~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~  272 (468)
T KOG0197|consen  201 WEIPREELKL-------IRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTK  272 (468)
T ss_pred             eeecHHHHHH-------HHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence            3455555544       5779999999999999974 4589999998877777899999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ++.+|||||||++|+|.+||+...  +..+...+.+.++.|||+||+||++   +++|||||.++||||+++..+||+|.
T Consensus       273 ~~piyIVtE~m~~GsLl~yLr~~~--~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDF  347 (468)
T KOG0197|consen  273 QEPIYIVTEYMPKGSLLDYLRTRE--GGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDF  347 (468)
T ss_pred             CCceEEEEEecccCcHHHHhhhcC--CCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEccc
Confidence            989999999999999999998732  3348999999999999999999999   99999999999999999999999883


Q ss_pred             cccc-------------ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhcc
Q 041096          496 FTLT-------------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       496 ~~~~-------------~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                      .-..             .-...|.|||.+..++++.|||||||||+||||+| |+.||......                
T Consensus       348 GLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~----------------  411 (468)
T KOG0197|consen  348 GLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE----------------  411 (468)
T ss_pred             ccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH----------------
Confidence            2111             12457999999999999999999999999999999 99999875432                


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                       ++.+.++...+-..|..|+..+.+||..||+.+|++|||++.+...|+.....
T Consensus       412 -ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  412 -EVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             -HHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence             35566677777788899999999999999999999999999999999876543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1e-43  Score=389.55  Aligned_cols=249  Identities=29%  Similarity=0.446  Sum_probs=211.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      .+....+.||+|+||+||+|....     ....||||.++..  .+.+++|.+|++++..++|||||+|+|.|.+++.+|
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            445556789999999999998743     3468999999883  336789999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCC----------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          421 LVYEYMPNGSLDRMLYQDSEN----------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +|+|||..|+|.++|......          ..+|+..+.+.||.|||.||+||-+   +.+|||||.++|+||.++..+
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEE
Confidence            999999999999999754321          2238899999999999999999998   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      ||+|..-              ...-..+||+||.+..++||++||||||||+|||+++ |+.||.+....          
T Consensus       643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~----------  712 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ----------  712 (774)
T ss_pred             EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH----------
Confidence            9988211              1223578999999999999999999999999999999 99999876542          


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                             ++.+.+..+-.-..+++++..++.||+.||+.+|++||+++||-..|+...+..
T Consensus       713 -------EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  713 -------EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             -------HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence                   223333333334678899999999999999999999999999999998665543

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=5e-44  Score=384.10  Aligned_cols=257  Identities=28%  Similarity=0.489  Sum_probs=225.1

Q ss_pred             ccCHHHHHHHhcCC---------CcCceeccCCceEEEEEEECCCC---eEEEEEeccC--CcchhHhHHHHHHHHhhcC
Q 041096          337 EFSYRELRSATRGF---------HSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKH--SHEGKTEFLAELSIIACLR  402 (645)
Q Consensus       337 ~~~~~~l~~~~~~f---------~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~  402 (645)
                      .++|+|.-.|...|         .+.++||.|.||.||+|.++..+   ..||||.++.  .+..+.+|+.|+.+|.+..
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            46787776666554         34588999999999999997655   5799999987  4566789999999999999


Q ss_pred             CCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 041096          403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI  482 (645)
Q Consensus       403 H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  482 (645)
                      ||||++|.|+....+..|||+|||+||+|+.+|+.+..+   +.|.|+..++.+||.||.||-+   .++|||||.++||
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNI  762 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNI  762 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhhe
Confidence            999999999999999999999999999999999987654   9999999999999999999998   9999999999999


Q ss_pred             EEcCCCCeeeeccccc---------c----cc--CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccccc
Q 041096          483 MLDANFNARLESSFTL---------T----AG--TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGH  546 (645)
Q Consensus       483 lld~~~~~kl~d~~~~---------~----~g--t~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~  546 (645)
                      ||+.+..+|++|..-.         .    .|  ..+|.|||.+..+++|.+||||||||||||+++ |.+||.....  
T Consensus       763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--  840 (996)
T KOG0196|consen  763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--  840 (996)
T ss_pred             eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--
Confidence            9999999999872211         1    11  368999999999999999999999999999888 9999987643  


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                                     .+++..+.+..+..-+.+|+..|.+||++||++|-.+||++.+++..|+++.-.|
T Consensus       841 ---------------QdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  841 ---------------QDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             ---------------HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence                           2456677777777888999999999999999999999999999999999775555

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-42  Score=348.35  Aligned_cols=245  Identities=27%  Similarity=0.396  Sum_probs=205.6

Q ss_pred             ccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeee
Q 041096          337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCA  414 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~  414 (645)
                      .++..||+.       .+.||+|..|+|||+.++.++..+|+|.+..  ....++++.+|++++++.+||+||.++|.|.
T Consensus        75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            355666654       5789999999999999999999999999854  4555788999999999999999999999999


Q ss_pred             eCC-eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          415 EKG-ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       415 ~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                      ... +..|+||||.+|||+.++.....    +++...-+|+.+|++||.|||++  ++||||||||+||||+..+.+||.
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~g~----i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKic  221 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRVGR----IPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKIC  221 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEec
Confidence            988 59999999999999999986533    89999999999999999999963  899999999999999999999998


Q ss_pred             cc----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc-ccchhhHHHHHHhhhccC
Q 041096          494 SS----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE-GHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       494 d~----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~-~~~~~~l~~~~~~~~~~~  562 (645)
                      |.          ....+||..|||||.+.+..|+.++||||||+.++|+++|+.||..... ......++.+        
T Consensus       222 DFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~--------  293 (364)
T KOG0581|consen  222 DFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA--------  293 (364)
T ss_pred             cccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH--------
Confidence            82          2445899999999999999999999999999999999999999976521 1122223222        


Q ss_pred             chhHHhhhhccCCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEAADKRLNGAFNED-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          +++. -....+.+ +...+..++..|+++||.+||+++|+++
T Consensus       294 ----Iv~~-ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  294 ----IVDE-PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             ----HhcC-CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                1111 11223343 6677888999999999999999999987

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-42  Score=333.42  Aligned_cols=247  Identities=26%  Similarity=0.372  Sum_probs=205.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeee-eeeCCe-EEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW-CAEKGE-LLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~-~~~~~~-~~lV~  423 (645)
                      +|.+.++||+|.||.|||+....+|..+|.|.+..   ....++....|+.+|++|+|||||+++++ +.++.+ ++|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            46677899999999999999999999999998875   34556789999999999999999999995 444555 89999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeecc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESS-------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~-------  495 (645)
                      |||..|+|...++..+++++.++....++++.|+++||.++|..+.+ -|+||||||.||+|+.++.+|++|.       
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence            99999999999998887788899999999999999999999985533 3889999999999999999999982       


Q ss_pred             -----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....+||+.||+||.+.+..|+.||||||+||++|||+.-+.||.+.+    ...+.             +.+..
T Consensus       180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n----~~~L~-------------~KI~q  242 (375)
T KOG0591|consen  180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN----LLSLC-------------KKIEQ  242 (375)
T ss_pred             chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc----HHHHH-------------HHHHc
Confidence                 233589999999999999999999999999999999999999998742    22222             11111


Q ss_pred             hccCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          571 RLNGAFN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       571 ~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .-....+ ....+.+.+|+..|+..||+.||+.-.+++.+...
T Consensus       243 gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~  285 (375)
T KOG0591|consen  243 GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE  285 (375)
T ss_pred             CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence            1111223 45678899999999999999999965555555543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-41  Score=339.21  Aligned_cols=190  Identities=29%  Similarity=0.462  Sum_probs=171.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ..+|...+.||+|+||+||+|+++.++..||||.+.+.   ....+....|+.+|+.++|||||+|+++++.++.+||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            35677888899999999999999999999999998764   345667889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC------CCeeeeccc-
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN------FNARLESSF-  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~------~~~kl~d~~-  496 (645)
                      |||.+|+|..|++.+..    ++......++.|+|.||++||+   ++||||||||+||||+..      -..||.|.. 
T Consensus        89 EyC~gGDLs~yi~~~~~----l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGR----LPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             EeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence            99999999999998764    8999999999999999999999   999999999999999875      345777621 


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET  543 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~  543 (645)
                                ...+|++-|||||++..++|+.|+|+||.|++|||+++|+.||...+
T Consensus       162 AR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  162 ARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             hhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence                      23589999999999999999999999999999999999999998644

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.7e-41  Score=353.86  Aligned_cols=238  Identities=26%  Similarity=0.428  Sum_probs=203.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ..|...+.||+|||+.+|+++...+|+.||+|++.+    .....+...+||++.++|+|||||+++++|++.+..|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            568889999999999999999988999999999876    4555677899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      |+|++++|.++++++.    ++++.+...++.||+.||.|||+   ++|+|||||..|+||++++++||+|.        
T Consensus        98 ELC~~~sL~el~Krrk----~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~  170 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRK----PLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY  170 (592)
T ss_pred             EecCCccHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecC
Confidence            9999999999998543    39999999999999999999999   99999999999999999999999982        


Q ss_pred             ----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          496 ----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       496 ----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ....|||+.|+|||++.....+-.+||||+||+||-|+.|++||+..+-.+....+              +..+- 
T Consensus       171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I--------------k~~~Y-  235 (592)
T KOG0575|consen  171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI--------------KLNEY-  235 (592)
T ss_pred             cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH--------------HhcCc-
Confidence                23458999999999999999999999999999999999999999864321111100              00011 


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHc
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILN  610 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~  610 (645)
                         .+|........+|+..+|+++|.+|||+++|+.  ++.
T Consensus       236 ---~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  236 ---SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             ---ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence               223344556677888999999999999999986  553

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=5.7e-40  Score=394.71  Aligned_cols=257  Identities=26%  Similarity=0.482  Sum_probs=215.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ...|...++||+|+||.||+|....++..||||++......   ..+|++++++++|||||+++|+|.+.+..++||||+
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            35677889999999999999999888999999988753322   235688999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-------cccc
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-------FTLT  499 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-------~~~~  499 (645)
                      ++|+|.++++.       ++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++...       ....
T Consensus       766 ~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~  838 (968)
T PLN00113        766 EGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKC  838 (968)
T ss_pred             CCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCc
Confidence            99999999952       899999999999999999999766689999999999999999988776421       1223


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC--CCC
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG--AFN  577 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~  577 (645)
                      .||..|+|||++.+..++.|+|||||||++|||++|+.||+....  ....+.+|++...........+|+.+..  ..+
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  916 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG--VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN  916 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC--CCCcHHHHHHHhcCccchhheeCccccCCCCcc
Confidence            578999999999999999999999999999999999999964322  2345667776666555666667777644  345


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .++...+.+++.+||+.+|++||||+||++.|++....
T Consensus       917 ~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        917 QNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             HHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence            56778899999999999999999999999999977553

>cd01951 lectin_L-type legume lectins

Probab=100.00  E-value=3.4e-39  Score=321.22  Aligned_cols=198  Identities=31%  Similarity=0.474  Sum_probs=170.3

Q ss_pred             CCCeEEecceEee--CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEec
Q 041096           34 LRNITLLGDSYLR--NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISP  111 (645)
Q Consensus        34 ~~~~~l~G~a~~~--~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p  111 (645)
                      ..++.++|||.+.  ++.|+||++   ..+++||++|++||++|       ++|+|+|+|.|.+.. ..+||||||+|+|
T Consensus        13 ~~~~~~~G~A~~~~~~~~l~Lt~~---~~~~~G~~~~~~~i~~~-------~~F~~~F~f~i~~~~-~~~gdG~aF~l~~   81 (223)
T cd01951          13 QSNWQLNGSATLTTDSGVLRLTPD---TGNQAGSAWYKTPIDLS-------KDFTTTFKFYLGTKG-TNGADGIAFVLQN   81 (223)
T ss_pred             hhhcEEcccEEecCCCCEEEECCC---CCCcEEEEEECCcEecc-------CCEEEEEEEEEeCCC-CCCCCcEEEEEec
Confidence            5789999999998  899999997   46799999999999998       689999999999765 5689999999999


Q ss_pred             CCCCC-CCCC--CccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccc-------cccCCCccccccCC
Q 041096          112 DNQIL-GSAG--GCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESI-------KTADPILQGIDLKS  181 (645)
Q Consensus       112 ~~~~~-~~~g--~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~-------~~~~~~~~~~~~~~  181 (645)
                      ..... +..|  ++||+     .+.++.+||||||++|.+++||+.+||||++|+..+.       ....+   .....+
T Consensus        82 ~~~~~~~~~g~~~~lG~-----~~~~~~~aVefDT~~N~~~~dp~~~higi~~n~~~~~~~~~~~~~~~~~---~~~~~~  153 (223)
T cd01951          82 DPAGALGGGGGGGGLGY-----GGIGNSVAVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSASL---PNGTGL  153 (223)
T ss_pred             CCCCccccCCCCCccCc-----cccCCeEEEEEeccccCCCCCCCCCEEEEEcCCCCCCcccccccceeeC---CCccCC
Confidence            87643 3444  78887     5668899999999999988899999999999999754       22221   112223


Q ss_pred             CCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeee
Q 041096          182 GNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ  251 (645)
Q Consensus       182 g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~  251 (645)
                      |+.++|||+|++.+++|+|+|..... |..++++.++||+.+++++||||||||||...+.|.|++|+|.
T Consensus       154 g~~~~v~I~Y~~~~~~L~v~l~~~~~-~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf~  222 (223)
T cd01951         154 GNEHTVRITYDPTTNTLTVYLDNGST-LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFT  222 (223)
T ss_pred             CCEEEEEEEEeCCCCEEEEEECCCCc-cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEec
Confidence            89999999999999999999986543 6778999999999999999999999999999999999999996

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-40  Score=371.30  Aligned_cols=248  Identities=27%  Similarity=0.427  Sum_probs=208.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCC-----eEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSG-----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~-----~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +....+.||+|.||.||+|...+..     ..||||.+++  +.+...+|.+|..+|++++|||||+++|.|.+....+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            4455678999999999999986533     3489999887  46678899999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCC---CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc
Q 041096          422 VYEYMPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL  498 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~  498 (645)
                      ++|||++|+|..||++.+.   +...|+..+.+.++.|||+|+.||++   +.+|||||.++|+||++...+||+|..-.
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence            9999999999999987632   23459999999999999999999999   99999999999999999999999882211


Q ss_pred             --------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          499 --------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       499 --------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                    ..-..+|||||.+..+.+|.|+|||||||+|||++| |..||...+..+....             
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~-------------  916 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD-------------  916 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH-------------
Confidence                          122468999999999999999999999999999999 9999987654221110             


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                         .+... +-..+..|++.++++|+.||+.+|++||++..+++.+..+....
T Consensus       917 ---~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  917 ---VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             ---HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence               11111 34667889999999999999999999999999999887664433

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-40  Score=345.53  Aligned_cols=252  Identities=21%  Similarity=0.376  Sum_probs=204.8

Q ss_pred             HHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC
Q 041096          340 YRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK  416 (645)
Q Consensus       340 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~  416 (645)
                      .+++....+.+.....||+|.||+||+|.+-.   .||||.++.   ..+..+.|++|+..+++-+|.||+-+.|||...
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            34555555666778899999999999999963   589998876   345678899999999999999999999999988


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      .. .||+.+|++.+|+.+|+....   .++..+.++|+.|||+||.|||.   ++|||||||+.||+|++++.+||+|..
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~et---kfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQET---KFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             ce-eeeehhccCchhhhhccchhh---hhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEeccc
Confidence            77 999999999999999987654   39999999999999999999999   999999999999999999999999832


Q ss_pred             --------------cccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh
Q 041096          497 --------------TLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                                    ....|...|||||++..   .+|+.++||||||+|+|||++|..||.........          +
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi----------f  603 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII----------F  603 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE----------E
Confidence                          22346788999999974   46899999999999999999999999832221111          1


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ..++-.-.  +.+ .....++++.+.+|+..||..++++||.+.+|+..|+.+..
T Consensus       604 mVGrG~l~--pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  604 MVGRGYLM--PDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             EecccccC--ccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            11110000  111 12234677788889999999999999999999998887655

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=6.9e-39  Score=339.79  Aligned_cols=249  Identities=26%  Similarity=0.407  Sum_probs=197.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC-C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK-G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~  417 (645)
                      .++|+..++||+|+||.||+|.+.     ..+..||||++...  ....+.+.+|+.++.++ +||||++++++|... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            467888999999999999999752     33568999998753  23346789999999999 899999999998764 4


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCC--------------------------------------------------------
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSEN--------------------------------------------------------  441 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~--------------------------------------------------------  441 (645)
                      ..++||||+++|+|.+++......                                                        
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            689999999999999999753210                                                        


Q ss_pred             --CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------------ccccCCcc
Q 041096          442 --GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------------LTAGTMGY  505 (645)
Q Consensus       442 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------------~~~gt~~y  505 (645)
                        ...+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+|++|...              ...++..|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence              1348889999999999999999999   9999999999999999999999987321              12345789


Q ss_pred             cCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHH
Q 041096          506 LAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRL  584 (645)
Q Consensus       506 ~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  584 (645)
                      +|||++.+..++.++|||||||+||||++ |+.||........   +..    ....+.         ....+......+
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~---~~~----~~~~~~---------~~~~~~~~~~~l  306 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE---FCQ----RLKDGT---------RMRAPENATPEI  306 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH---HHH----HHhcCC---------CCCCCCCCCHHH
Confidence            99999999999999999999999999997 9999976432111   111    011110         111223345678


Q ss_pred             HHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          585 LLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       585 ~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+++..||+.||++|||+.++++.|+....
T Consensus       307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         307 YRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            899999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-39  Score=329.54  Aligned_cols=239  Identities=25%  Similarity=0.330  Sum_probs=193.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc--------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      .+.|...+.||+|+||.|-+|..+.+++.||||++.+...        ......+|+++|++|+|||||++.+++...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            3456778999999999999999999999999999876211        12235799999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC---CCeeeec-
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN---FNARLES-  494 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~---~~~kl~d-  494 (645)
                      .||||||+.+|.|.+.+-.+..    +......-+++|++.|+.|||+   +||+||||||+||||..+   ...||.| 
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEeccc
Confidence            9999999999999999976554    6666778899999999999999   999999999999999766   5567766 


Q ss_pred             ----------cccccccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          495 ----------SFTLTAGTMGYLAPEYLQYGT---ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       495 ----------~~~~~~gt~~y~APE~~~~~~---~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                .....|||+.|.|||++.+..   +..+.|+||+||+||-+++|.+||............+         
T Consensus       324 GlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI---------  394 (475)
T KOG0615|consen  324 GLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI---------  394 (475)
T ss_pred             chhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH---------
Confidence                      334568999999999998654   3458899999999999999999998765433221111         


Q ss_pred             CchhHHhhhhcc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 GRIIEAADKRLN--GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ~~~~~~~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                            ...++.  ...-....++...++.+++..||++|||+.|+++
T Consensus       395 ------~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  395 ------LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ------hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                  111110  1122344677889999999999999999999986

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-38  Score=331.82  Aligned_cols=249  Identities=25%  Similarity=0.404  Sum_probs=204.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .....++||+|.||.|.++.... +..||||+++..  ...+.+|.+|+++|.+|+|||||+|+|.|..++.+++|+|||
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            34556889999999999999864 689999999873  345689999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---ccc-----
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---FTL-----  498 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---~~~-----  498 (645)
                      ++|+|.++|..+....  +.-....+|+.|||+||+||.+   .++|||||.++|+|+|.++++||.|.   ...     
T Consensus       618 EnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  618 ENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             hcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCc
Confidence            9999999998764321  4556778899999999999999   99999999999999999999999884   211     


Q ss_pred             ------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          499 ------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC--GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       499 ------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t--G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            .+-..+|||||.+.-+++|.+||||+||+.|||+++  ..+||....+.+    .++....+++.+....    
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~----vven~~~~~~~~~~~~----  764 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ----VVENAGEFFRDQGRQV----  764 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH----HHHhhhhhcCCCCcce----
Confidence                  123578999999999999999999999999999865  788998755432    2232222332222111    


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                        ....+.-++..++++++.||+.|.++||+++++...|++.+
T Consensus       765 --~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  765 --VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             --eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence              12345567889999999999999999999999999998654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-39  Score=345.43  Aligned_cols=245  Identities=29%  Similarity=0.407  Sum_probs=205.7

Q ss_pred             CcCceeccCCceEEEEEEECCCCe---E-EEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGS---V-AAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~---~-vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ...++||+|+||.||+|.+...+.   . ||||..+.    ......+|++|.++|++++|||||+++|++.....+|||
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            345889999999999999865322   3 89998774    355678999999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccccccc-
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-  501 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~g-  501 (645)
                      ||+|.||+|.+||.+...   .++..+++.++.+.|.||+|||+   .+++||||.++|+|++.+..+||+|..-...| 
T Consensus       240 mEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             EEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            999999999999988764   39999999999999999999999   99999999999999999999999884333322 


Q ss_pred             -----------CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          502 -----------TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       502 -----------t~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                                 ..+|+|||.+..+.|+.++|||||||++||+++ |..||.+....    .+..+            ++.
T Consensus       314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~k------------I~~  377 (474)
T KOG0194|consen  314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAK------------IVK  377 (474)
T ss_pred             ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHH------------HHh
Confidence                       368999999999999999999999999999999 88899875432    11111            112


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      ...+...+...+..+..++..||..+|++||+|.++.+.|+.......
T Consensus       378 ~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  378 NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            233344555677888888899999999999999999999987655544

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=2.5e-38  Score=323.84  Aligned_cols=242  Identities=24%  Similarity=0.434  Sum_probs=198.8

Q ss_pred             cCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.+.   ..+..+|+|.++..  ......|.+|+.++.+++||||++++|++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            46788899999999999999875   34578999988763  23346799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+++|+|.+++.....   .+++.+++.++.|++.||+|||+   ++++||||||+|||++.++..++.|...     
T Consensus        85 ~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          85 TEYMSNGALDSFLRKHEG---QLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             EEeCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            999999999999976432   38999999999999999999998   9999999999999999999999976321     


Q ss_pred             --------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          498 --------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       498 --------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ...++..|+|||.+.+..++.++|||||||++||+++ |+.||......    .+..             .+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~----~~~~-------------~~  221 (266)
T cd05064         159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ----DVIK-------------AV  221 (266)
T ss_pred             ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HHHH-------------HH
Confidence                    1123568999999999999999999999999999775 99999764321    1111             11


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ........+..++..+.+++..||+.+|.+||+++++.+.|++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         222 EDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            11111223445667788999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-39  Score=327.84  Aligned_cols=261  Identities=25%  Similarity=0.340  Sum_probs=201.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHh--hcCCCCeeeeeeeeeeCC----eEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIA--CLRHKNLVQLLGWCAEKG----ELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~--~l~H~niv~l~g~~~~~~----~~~l  421 (645)
                      ......++||+|+||.||||.+.  ++.||||++..  +..+.|.+|-++.+  .++|+||+++++.-..+.    +++|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE--QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCH--HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            34455678999999999999997  58999999865  55667888777765  458999999999987766    8999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC------CCCeeeCCCCCCcEEEcCCCCeeeec-
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC------EQQVIHRDIKASNIMLDANFNARLES-  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlkp~NIlld~~~~~kl~d-  494 (645)
                      |+||.++|+|.+||..+.     ++|....+|+..+++||+|||++.      +++|+|||||++||||.+|+++.|.| 
T Consensus       286 Vt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             EeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            999999999999998764     899999999999999999999865      66899999999999999999999987 


Q ss_pred             -------------cccccccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH
Q 041096          495 -------------SFTLTAGTMGYLAPEYLQYGT------ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       495 -------------~~~~~~gt~~y~APE~~~~~~------~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~  555 (645)
                                   +....+||.+|||||++.+..      .-.+.||||+|.|||||++...-+......+....+-..+
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence                         222358999999999997642      2347999999999999999776553222222222233333


Q ss_pred             HhhhccCchhHHh-hhhccCCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          556 WGLYAEGRIIEAA-DKRLNGAFNE-----DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       556 ~~~~~~~~~~~~~-d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      .....-+++.+.+ .++.+..++.     .-+..+++.+..||+.||+.|.|+.=|.+++.++.....
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            3333333333322 3333344433     246789999999999999999999999988877655544

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-38  Score=321.58  Aligned_cols=253  Identities=25%  Similarity=0.343  Sum_probs=204.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .+.|+..+.||.|..++||+|.....++.||||++...+  .+...+.+|+..|+.++||||++++..|..+.++|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            356888899999999999999999899999999988743  345789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      ||.+||+.++++..-..+  ++...+..|.+++++||.|||.   +|.||||||+.||||+++|.+||+|.         
T Consensus       105 fMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            999999999998765444  8999999999999999999999   99999999999999999999999872         


Q ss_pred             -------ccccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          496 -------FTLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       496 -------~~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                             +...+||++|||||++..  ..|+.|+||||||+..+||++|+.||.....   +..++....+....     
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP---mkvLl~tLqn~pp~-----  251 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP---MKVLLLTLQNDPPT-----  251 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh---HHHHHHHhcCCCCC-----
Confidence                   244589999999999653  4699999999999999999999999987532   22222211111100     


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .....+..+........+.+++-.|+..||.+|||++++++  +++..
T Consensus       252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            00001111111223347888889999999999999999986  45443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-39  Score=321.91  Aligned_cols=230  Identities=24%  Similarity=0.316  Sum_probs=193.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..++||+|+||+||.++.+++++.+|+|.+++.    ....+...+|..+|.+++||.||++.-.+++.+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            45789999999999999999999999999999998873    33466788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec--------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES--------  494 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d--------  494 (645)
                      +||+.||.|..+|.+...    ++.....-.+..|+.||.|||+   .+|+||||||+|||||.+|.+++.|        
T Consensus       104 ld~~~GGeLf~hL~~eg~----F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGR----FSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EeccCCccHHHHHHhcCC----cchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            999999999999987654    8888888899999999999999   9999999999999999999999976        


Q ss_pred             ----cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          495 ----SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       495 ----~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                          .....+||+.|||||++.+..|+..+|+||+|+++|||++|.+||...+.......                +...
T Consensus       177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~----------------I~~~  240 (357)
T KOG0598|consen  177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK----------------ILKG  240 (357)
T ss_pred             cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH----------------HhcC
Confidence                23345899999999999999999999999999999999999999987543221111                1111


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARP  600 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  600 (645)
                      ++ ...+.-......+++...+..||++|.
T Consensus       241 k~-~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  241 KL-PLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             cC-CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            11 112222344556666788999999995

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.1e-39  Score=313.65  Aligned_cols=249  Identities=23%  Similarity=0.305  Sum_probs=197.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch---hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .|+...++|+|+||.|||++.+++|+.||||++..++++   .+-.++||++|++|+|+|+|.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            466678899999999999999999999999999875543   45688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-----------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----------  494 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-----------  494 (645)
                      |+.. +.+-|......   ++.....+++.|++.|+.|+|+   ++++||||||+||||+.++..|++|           
T Consensus        83 ~dhT-vL~eLe~~p~G---~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   83 CDHT-VLHELERYPNG---VPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             cchH-HHHHHHhccCC---CCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence            9764 44445544432   8889999999999999999999   9999999999999999999999987           


Q ss_pred             -cccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh---
Q 041096          495 -SFTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD---  569 (645)
Q Consensus       495 -~~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d---  569 (645)
                       ..+..+.|.+|+|||.+.+ -+|...+||||.||++.||++|...|.+..+-+....+......+...  -++++.   
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~pr--hq~iF~~N~  233 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPR--HQSIFSSNP  233 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHH--HHHHhccCC
Confidence             3345578999999999987 689999999999999999999999888765544333333322222111  111110   


Q ss_pred             -------hh------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 -------KR------LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 -------~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                             |.      +...+ ++....+++++..|++.||.+|++-+|++.
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                   00      00011 123347889999999999999999998865

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=8.1e-38  Score=323.41  Aligned_cols=250  Identities=18%  Similarity=0.291  Sum_probs=199.6

Q ss_pred             CCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch----hHhHHHHHHHHhhcCCCCeeee
Q 041096          334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG----KTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       334 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~----~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      ..+.++++++.     ......||+|++|.||+|.+.  +..||||++......    .+.|.+|+.+|.+++||||+++
T Consensus        11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~   83 (283)
T PHA02988         11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI   83 (283)
T ss_pred             cceecCHHHcC-----CCCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            34455666662     233467999999999999984  789999998764332    3667899999999999999999


Q ss_pred             eeeeee----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          410 LGWCAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       410 ~g~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      +|++.+    ....++||||+++|+|.+++....    .++|...+.++.|++.||.|||+.  .+++||||||+|||++
T Consensus        84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~  157 (283)
T PHA02988         84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVT  157 (283)
T ss_pred             eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEEC
Confidence            999877    347899999999999999997643    389999999999999999999971  4788999999999999


Q ss_pred             CCCCeeeeccc---------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          486 ANFNARLESSF---------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       486 ~~~~~kl~d~~---------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                      .++.+|+.|..         ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......    .+...
T Consensus       158 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----~~~~~  233 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----EIYDL  233 (283)
T ss_pred             CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH----HHHHH
Confidence            99999997732         22457889999999976  68999999999999999999999999764321    11111


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +            .........+......+.+++..||+.||++|||++++++.|+..
T Consensus       234 i------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        234 I------------INKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             H------------HhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            1            011111123334566788999999999999999999999999754

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-39  Score=336.63  Aligned_cols=240  Identities=25%  Similarity=0.447  Sum_probs=204.5

Q ss_pred             cccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      .++.++++..       .+-||+|+.|.||+|++.  ++.||||+.+.-      -..+|+-|++|+|+||+.+.|+|..
T Consensus       119 WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~--netVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtq  183 (904)
T KOG4721|consen  119 WEIPFEEISE-------LEWLGSGAQGAVFLGRLH--NETVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQ  183 (904)
T ss_pred             ccCCHHHhhh-------hhhhccCcccceeeeecc--CceehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecC
Confidence            3455666543       456999999999999998  789999987542      2367888999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ..-+|||||||+.|-|.+.|+..+.    +.......+.++||.||.|||.   +.|||||||.-||||..+..+||+|.
T Consensus       184 sPcyCIiMEfCa~GqL~~VLka~~~----itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDF  256 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLKAGRP----ITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDF  256 (904)
T ss_pred             CceeEEeeeccccccHHHHHhccCc----cCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccc
Confidence            9999999999999999999987654    7888889999999999999999   99999999999999999999999884


Q ss_pred             cc-----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 FT-----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~~-----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .+           ..+||..|||||++...+.++|+||||||||||||+||..||...+....       +|+.      
T Consensus       257 GTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-------IwGV------  323 (904)
T KOG4721|consen  257 GTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-------IWGV------  323 (904)
T ss_pred             cchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-------EEec------
Confidence            32           24799999999999999999999999999999999999999987643211       1111      


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                         -...|....+..+++.+..|+++||+..|..||++++++..|+-..
T Consensus       324 ---GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~  369 (904)
T KOG4721|consen  324 ---GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS  369 (904)
T ss_pred             ---cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence               1233444677889999999999999999999999999999998443

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=335.58  Aligned_cols=244  Identities=27%  Similarity=0.423  Sum_probs=214.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ..+....++||-|.||.||.|.++.-...||||.++...-..++|++|..+|+.++|||+|+|+|+|..+..+|||+|||
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            34556678999999999999999988899999999998888999999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc----------c
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS----------F  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~----------~  496 (645)
                      .+|+|.+||++....  .++-...+.++.||++||.||..   +.+|||||.++|+|+.++..+|+.|.          .
T Consensus       346 ~yGNLLdYLRecnr~--ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY  420 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRS--EVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY  420 (1157)
T ss_pred             cCccHHHHHHHhchh--hcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCce
Confidence            999999999876543  37778889999999999999998   99999999999999999999999772          2


Q ss_pred             ccccc---CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 TLTAG---TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ~~~~g---t~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                      +...|   ...|.|||.+....++.|+|||+|||+||||.| |..||.+.+-.                 .+.+.+.+..
T Consensus       421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----------------qVY~LLEkgy  483 (1157)
T KOG4278|consen  421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------QVYGLLEKGY  483 (1157)
T ss_pred             ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----------------HHHHHHhccc
Confidence            22333   457999999999999999999999999999999 99999875321                 2334455556


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +.+.++.|+..+++||+.||+.+|.+||+++|+-+.++..
T Consensus       484 RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  484 RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            6677888999999999999999999999999998877744

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.3e-38  Score=323.07  Aligned_cols=236  Identities=36%  Similarity=0.566  Sum_probs=188.7

Q ss_pred             cCceeccCCceEEEEEEEC----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          352 SNRILGRGAFGNVYKAYFA----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..+.||.|.||.||+|.+.    ..+..|+||.++..  ....+.|.+|++.+++++||||++++|+|...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3578999999999999998    34678999999653  33468899999999999999999999999988889999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++|+|.++|....  ...+++.+++.|+.||++||+|||+   .+++|+||+++||+|+.++.+|+++..         
T Consensus        83 ~~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   83 CPGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS  157 (259)
T ss_dssp             -TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred             cccccccccccccc--ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence            99999999998862  2238999999999999999999999   899999999999999999999998731         


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....+...|+|||.+....++.++||||||+++|||++ |+.||......    .+             .+.+..
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~----~~-------------~~~~~~  220 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE----EI-------------IEKLKQ  220 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH----HH-------------HHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cc-------------cccccc
Confidence                 11235678999999999999999999999999999999 77888654221    11             112222


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      ..+...+..++..+.+++..||+.+|++||+|+++++.|
T Consensus       221 ~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  221 GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            222334445677788999999999999999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.2e-37  Score=325.18  Aligned_cols=251  Identities=23%  Similarity=0.391  Sum_probs=196.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECC----------------CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS----------------SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~----------------~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      ++|...++||+|+||.||+|.+..                .+..||+|.+...  .....+|.+|++++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            567888999999999999998643                3447999988763  3345679999999999999999999


Q ss_pred             eeeeeeCCeEEEEEecCCCCCHhHHhhhcCC---------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 041096          410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSE---------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH  474 (645)
Q Consensus       410 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  474 (645)
                      ++++.+.+..++||||+++|+|.+++.....               ....++|.+.++++.|++.||+|||+   .+|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence            9999999999999999999999999865321               11347899999999999999999999   99999


Q ss_pred             CCCCCCcEEEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCC
Q 041096          475 RDIKASNIMLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC--GRRP  538 (645)
Q Consensus       475 rDlkp~NIlld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t--G~~P  538 (645)
                      |||||+|||++.++.+|++|...              ...++..|+|||++..+.++.++||||||+++|||++  +..|
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            99999999999999999988321              1234678999999998899999999999999999987  5567


Q ss_pred             CCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          539 IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       539 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      |......    .....+........      .......+..++..+.+++..||+.+|++||||++|.+.|++
T Consensus       242 ~~~~~~~----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         242 YGELTDE----QVIENAGEFFRDQG------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CCcCCHH----HHHHHHHHHhhhcc------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            7654321    12222211111100      000011223455678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.1e-37  Score=335.24  Aligned_cols=247  Identities=25%  Similarity=0.377  Sum_probs=197.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      .++|+..+.||+|+||.||+|+.     .+++..||||+++..  ....+.+.+|+.++..+ +||||++++++|.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            34688889999999999999974     345678999998753  23446788999999999 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC----------------------------------------------------------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE----------------------------------------------------------  440 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  440 (645)
                      .++||||+++|+|.+++.....                                                          
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            9999999999999999975321                                                          


Q ss_pred             -------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          441 -------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       441 -------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                                   ....++|..+++++.||++||+|||+   ++++||||||+|||++.+..+|+.|...          
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                         01247899999999999999999999   9999999999999999999999987321          


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...++..|+|||.+.+..++.++|||||||++|||++ |..||.......   .+...             +....
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~---~~~~~-------------~~~~~  334 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS---KFYKM-------------IKEGY  334 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH---HHHHH-------------HHhCc
Confidence                1123457999999999999999999999999999998 888986543211   11111             11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ....+...+..+.+++..||+.||++||+|.+|++.|++.
T Consensus       335 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         335 RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            1112222345688999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=317.49  Aligned_cols=256  Identities=23%  Similarity=0.391  Sum_probs=196.0

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHh--hcCCCCeeeeeeeeeeCC----
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIA--CLRHKNLVQLLGWCAEKG----  417 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~--~l~H~niv~l~g~~~~~~----  417 (645)
                      +...++....+.||+|.||.||+|.++  |+.||||++...++  +.+.+|.++.+  .|+|+||+.+++.-..+.    
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc--CCceEEEEecccch--hhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence            445567888899999999999999998  89999999976543  34556555554  569999999998765443    


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCCCcEEEcCCCCeee
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      ++|||++|.++|||.+||....     ++....++++..+|.||+|||.+.     ++.|.|||||+.||||..++.+.|
T Consensus       283 QLwLvTdYHe~GSL~DyL~r~t-----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I  357 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNRNT-----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  357 (513)
T ss_pred             EEEEeeecccCCcHHHHHhhcc-----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence            7899999999999999997643     899999999999999999999753     788999999999999999999999


Q ss_pred             ec----------------cccccccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcC----------CCCCC
Q 041096          493 ES----------------SFTLTAGTMGYLAPEYLQYGT------ATEKTDVFSYGVVVLEVACG----------RRPIE  540 (645)
Q Consensus       493 ~d----------------~~~~~~gt~~y~APE~~~~~~------~t~ksDV~SfGvvl~El~tG----------~~P~~  540 (645)
                      .|                ..+..+||.+|||||++...-      .-..+||||||+|+||++..          +.||.
T Consensus       358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy  437 (513)
T KOG2052|consen  358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY  437 (513)
T ss_pred             eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence            77                334568999999999997532      13469999999999999863          34665


Q ss_pred             ccccccchhhHHHHHHhhhccCchhHHhhhhccCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          541 RETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       541 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .....+....-+..+       --.+.+.|.+...+ +.+.+..+.++|..||..+|..|-|+-.+.+.|.++.+.
T Consensus       438 d~Vp~DPs~eeMrkV-------VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  438 DVVPSDPSFEEMRKV-------VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             cCCCCCCCHHHHhcc-------eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            433222111111000       01112223332222 235788999999999999999999999999998877653

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.1e-37  Score=316.29  Aligned_cols=243  Identities=26%  Similarity=0.389  Sum_probs=202.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .+|...+.||+|+||.||+|.....+..+|+|.+........++.+|++++++++|+||++++++|..++..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            35777889999999999999998889999999988766667789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc---------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---------  498 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~---------  498 (645)
                      +++|.+++.....  ..+++..++.++.|+++||+|||+   .+++||||||+||+++.++.+|+.|....         
T Consensus        86 ~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          86 YGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999999975432  348999999999999999999998   99999999999999999999999873211         


Q ss_pred             ----cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          499 ----TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       499 ----~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                          ..++..|+|||.+.+..++.++|||||||++|||++ |..||......    ..             .+.+.....
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~-------------~~~~~~~~~  223 (263)
T cd05052         161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QV-------------YELLEKGYR  223 (263)
T ss_pred             ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HH-------------HHHHHCCCC
Confidence                123457999999999999999999999999999998 89998653221    11             111111222


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...+...+..+.+++.+||+.+|++||++.++++.|+..
T Consensus       224 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         224 MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            233344567788999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.1e-37  Score=317.30  Aligned_cols=244  Identities=26%  Similarity=0.457  Sum_probs=200.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC-----eEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG-----SVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-----~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|.....+     ..+++|.+...  ......|.+|++++.+++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            35777899999999999999876544     67999988653  233567899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          421 LVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      ++|||+++++|.+++......            ...+++...+.++.|++.||+|||+   .+++||||||+||+++.++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence            999999999999999764221            1348899999999999999999999   9999999999999999999


Q ss_pred             Ceeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHH
Q 041096          489 NARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       489 ~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~  553 (645)
                      .+++.|..              ....++..|+|||.+....++.++|||||||++|||++ |..||......    .+. 
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~----~~~-  236 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ----EVI-  236 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHH-
Confidence            99997722              12245678999999998899999999999999999998 99999764321    111 


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                  +.+........+...+..+.+++..||+.+|.+||++++|++.|++
T Consensus       237 ------------~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         237 ------------EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ------------HHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                        1222222223345567889999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=325.87  Aligned_cols=254  Identities=23%  Similarity=0.327  Sum_probs=206.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHh--HHHHHHHHhhcC-CCCeeeeeeeeeeCC-eEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE--FLAELSIIACLR-HKNLVQLLGWCAEKG-ELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~--~~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~lV  422 (645)
                      .++|...++||.|.||.||+|+-..++..||||+++..-..-++  =++|+..|++|. ||||++|...+.+.+ .+++|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            35677788999999999999999999999999999874433333  468999999998 999999999999888 99999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec--------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES--------  494 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d--------  494 (645)
                      |||| ..+|++.++.+.   ..++..++..|+.||++||+|+|+   +|+.|||+||+|||+......||+|        
T Consensus        89 fE~M-d~NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   89 FEFM-DCNLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             HHhh-hhhHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence            9999 569999998764   359999999999999999999999   9999999999999999999999988        


Q ss_pred             ---cccccccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc------h
Q 041096          495 ---SFTLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR------I  564 (645)
Q Consensus       495 ---~~~~~~gt~~y~APE~~~-~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~------~  564 (645)
                         ..+..+.|.+|+|||++. .+.|+.+.||||+|||++|+.+-+..|.+.++.+....+++ +.+......      +
T Consensus       162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~-VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE-VLGTPDKDSWPEGYNL  240 (538)
T ss_pred             cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH-HhCCCccccchhHHHH
Confidence               345567899999999875 57899999999999999999999999988766554444433 222222111      1


Q ss_pred             hHHhhhhccC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          565 IEAADKRLNG-------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       565 ~~~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...+.=++..       ..-..+.....+++..|+..||.+|||+.|++++
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            1122111110       1112366788899999999999999999999984

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.4e-37  Score=318.93  Aligned_cols=240  Identities=23%  Similarity=0.318  Sum_probs=195.6

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .|+..+.||+|+||.||+|....++..||+|.+...    ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            367788999999999999999888999999987652    2234468899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++|+|..++.....  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++..++.|..        
T Consensus        81 ~~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          81 IMNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             ecCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            9999999988865332  248999999999999999999999   999999999999999999999998721        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||..|+|||++.+..++.++|||||||++|||++|+.||...........+..             .+ ....
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~-------------~~-~~~~  221 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR-------------RV-KEDQ  221 (285)
T ss_pred             CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH-------------Hh-hccc
Confidence               224589999999999999999999999999999999999999986433211111100             00 0011


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      ..++......+.+++..||+.||.+||+     ++++++
T Consensus       222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            1233344567788999999999999997     788876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-38  Score=329.32  Aligned_cols=236  Identities=27%  Similarity=0.377  Sum_probs=201.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchh-HhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~-~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .|....+||+|..|.||.+....++..||||++....+.. +-..+|+.+|+..+|+|||+++..+..++++|+|||||+
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            4666788999999999999999999999999999866654 457899999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------------c
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------S  495 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------------~  495 (645)
                      +|+|.+.+....     +++.++..|+.++++||+|||.   ++|+|||||.+||||+.++..||.|            .
T Consensus       354 ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  354 GGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             CCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence            999999997654     8999999999999999999999   9999999999999999999999987            2


Q ss_pred             ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          496 FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       496 ~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....+||++|||||++....|..|.||||||++++||+-|..||-..+.-..+ .++            ...-.+.+  .
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl-yLI------------a~ng~P~l--k  490 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLI------------ATNGTPKL--K  490 (550)
T ss_pred             cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH-HHH------------hhcCCCCc--C
Confidence            34458999999999999999999999999999999999999999764321111 110            11111222  2


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .++.....+.++..+|++.|+.+||++.|+++
T Consensus       491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            34445667788889999999999999999997

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=5.3e-37  Score=311.90  Aligned_cols=239  Identities=24%  Similarity=0.374  Sum_probs=195.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||++.+.. +..+|+|.+.........+.+|++++++++||||++++++|...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            357778899999999999998865 5678999887655556789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +|+|.+++.....   .++|..+..++.|++.||+|||+   ++++||||||+||+++.++.+++.|...          
T Consensus        83 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          83 NGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             CCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence            9999999975432   38999999999999999999999   9999999999999999999999977221          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++..|+|||.+....++.++||||||+++|||++ |+.||......    .....+..    +.         .
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~----~~~~~i~~----~~---------~  219 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY----EVVEMISR----GF---------R  219 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHC----CC---------C
Confidence               1123457999999998889999999999999999999 89998754321    11111111    00         0


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ...+......+.+++.+||+.+|++||+|.++++.|.
T Consensus       220 ~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         220 LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            0112223456889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2e-37  Score=333.20  Aligned_cols=247  Identities=26%  Similarity=0.391  Sum_probs=196.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      .++|+..+.||+|+||.||+|....     ++..||+|++...  ......+.+|+++++++ +|+||++++++|...+.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            3578889999999999999998533     3457999998753  22345688999999999 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC----------------------------------------------------------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE----------------------------------------------------------  440 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  440 (645)
                      .++||||+++|+|.+++.....                                                          
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            9999999999999999864321                                                          


Q ss_pred             --------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------------c
Q 041096          441 --------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------------L  498 (645)
Q Consensus       441 --------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------------~  498 (645)
                              ....+++.++++++.|+++||+|||+   ++++||||||+|||++.++.++++|...              .
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                    01247889999999999999999999   9999999999999999999999987321              1


Q ss_pred             cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       499 ~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ..++..|+|||++....++.++|||||||++|||++ |+.||.........                ...+........+
T Consensus       274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~----------------~~~~~~~~~~~~~  337 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF----------------YKMVKRGYQMSRP  337 (374)
T ss_pred             CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH----------------HHHHHcccCccCC
Confidence            123457999999998999999999999999999997 99999764322111                1111111111122


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...+..+.+++..||+.+|++||++.+|++.|+++
T Consensus       338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22346788899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=4.1e-37  Score=323.14  Aligned_cols=245  Identities=23%  Similarity=0.396  Sum_probs=196.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .+|+..+.||+|+||.||+|++..++.    .||+|.+...  ....+++.+|+.+++.++|+||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            468889999999999999999765554    3899988653  33456899999999999999999999999875 5789


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---  498 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~---  498 (645)
                      ++||+++|+|.+++.....   .+++..++.++.||+.||+|||+   .+++||||||+|||++.++.+|+.|....   
T Consensus        86 v~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             eeecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccc
Confidence            9999999999999986543   38899999999999999999999   99999999999999999999999872111   


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ..++..|+|||++....++.++|||||||++|||++ |+.||......    .+..             
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~----~~~~-------------  222 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISS-------------  222 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHH-------------
Confidence                       123567999999999999999999999999999998 99998753211    1111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      .+........+..+...+.+++..||..+|.+||++.++++.|......+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         223 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             HHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            11111111122234456788999999999999999999999988665433

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=317.39  Aligned_cols=240  Identities=26%  Similarity=0.399  Sum_probs=195.3

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--eEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--ELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~Ey  425 (645)
                      ++...+.||+|.||.||++...++|...|||...... ...+.+.+|+.+|.+++|||||+++|.....+  .+++.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            4556788999999999999999889999999876642 12456899999999999999999999855544  69999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF--------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~--------  496 (645)
                      +++|+|.+++.+...   .++.........||++||+|||+   ++|+||||||+||||+. ++.+||.|..        
T Consensus        98 ~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             cCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            999999999987653   39999999999999999999998   99999999999999999 7999998722        


Q ss_pred             -------cccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ....||+.|||||++..+. ...++||||+||++.||+||+.||....      ....+.         ..+.
T Consensus       172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~------~~~~~~---------~~ig  236 (313)
T KOG0198|consen  172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF------EEAEAL---------LLIG  236 (313)
T ss_pred             cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc------chHHHH---------HHHh
Confidence                   1246999999999999643 3459999999999999999999997631      011111         1111


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      .......++........+++..|+..+|++|||++++++..
T Consensus       237 ~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  237 REDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             ccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            11122245556667788888999999999999999999854

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2e-37  Score=323.07  Aligned_cols=238  Identities=24%  Similarity=0.316  Sum_probs=203.0

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~  420 (645)
                      ..++|...+.||+|+|++|++|+...++..+|||++.+.    +.-.+....|-++|.+| .||.|++|+-.|.+...+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            346788899999999999999999999999999998762    23345677888999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      +|+||++||+|.++|++.+.    ++.......+.+|+.||+|||+   .|||||||||+|||||.|+..+|.|.     
T Consensus       151 FvLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence            99999999999999998764    8888889999999999999999   99999999999999999999999761     


Q ss_pred             --------------------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH
Q 041096          496 --------------------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       496 --------------------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~  555 (645)
                                          ....+||..|.+||++..+..+..+|+|+|||+||+|+.|.+||...++--....++   
T Consensus       224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~---  300 (604)
T KOG0592|consen  224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ---  300 (604)
T ss_pred             CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH---
Confidence                                123589999999999999999999999999999999999999998755321111111   


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                                 .++    -.+++..++.+.+|+...+..||.+|+|.+++.+.
T Consensus       301 -----------~l~----y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  301 -----------ALD----YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             -----------Hhc----ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence                       111    24455556777888889999999999999999773

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=4.9e-37  Score=317.58  Aligned_cols=253  Identities=23%  Similarity=0.280  Sum_probs=194.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|+...++..+|+|++...   ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4688899999999999999999988999999988753   2335678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |++++.|..+....    ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+|++|..        
T Consensus        81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  153 (287)
T cd07848          81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG  153 (287)
T ss_pred             cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence            99987776554322    238999999999999999999998   999999999999999999999998721        


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-------h-hhccCc
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-------G-LYAEGR  563 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-------~-~~~~~~  563 (645)
                           ....|+..|+|||++.+..++.++|||||||++|||++|+.||...........+.....       . ......
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07848         154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR  233 (287)
T ss_pred             ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence                 123578999999999988999999999999999999999999976432221111111000       0 000000


Q ss_pred             hhHHhhhhccC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          564 IIEAADKRLNG------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       564 ~~~~~d~~l~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......+....      .........+.+++..|++.||++|||++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00000000000      001123456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=320.37  Aligned_cols=236  Identities=21%  Similarity=0.236  Sum_probs=196.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|....+++.+|+|++....    ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888899999999999999999889999999886522    23456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++.....++.|++.||+|||+   ++++||||||+|||++.++..|+.|..       
T Consensus        81 e~~~~~~L~~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          81 EYVPGGELFSYLRNSGR----FSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             eCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999999976543    8899999999999999999999   999999999999999999999998732       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    +...            +....  .
T Consensus       154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~----~~~~------------i~~~~--~  215 (291)
T cd05612         154 RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG----IYEK------------ILAGK--L  215 (291)
T ss_pred             CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH------------HHhCC--c
Confidence              12358999999999999889999999999999999999999997643211    1110            00111  1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQI  608 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~~  608 (645)
                      .++......+.+++..|++.||.+||+     ++++++.
T Consensus       216 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         216 EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            223333456788999999999999995     8888763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.3e-36  Score=308.91  Aligned_cols=247  Identities=25%  Similarity=0.369  Sum_probs=202.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|+...++..+|||.+..    .......+.+|+++++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            578889999999999999999988899999997654    2233457899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.........++......++.|+++||+|||+   .+++|+||||+||+++.++..++.|..       
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999999986544334458899999999999999999998   999999999999999999999997732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....|+..|+|||.+.+..++.++||||||+++|||++|+.||......  ...+..             .+...
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~--~~~~~~-------------~~~~~  223 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LFSLCQ-------------KIEQC  223 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc--HHHHHH-------------HHhcC
Confidence                 1235788999999999888999999999999999999999998653211  111111             11111


Q ss_pred             -ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          572 -LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       572 -l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       ............+.+++.+||+.+|++||++.+|++.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence             11112234456789999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.9e-36  Score=320.34  Aligned_cols=252  Identities=24%  Similarity=0.302  Sum_probs=198.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..+.||+|+||.||++....++..+|+|.+...  ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            36788899999999999999999989999999988753  2335679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++.....    +++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+++.|..        
T Consensus        84 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  157 (331)
T cd06649          84 HMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  157 (331)
T ss_pred             cCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence            9999999999976443    8899999999999999999997  2369999999999999999999998732        


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc--------------
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA--------------  560 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~--------------  560 (645)
                        ....|+..|+|||++.+..++.++|||||||++|||++|+.||.......    +.........              
T Consensus       158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  233 (331)
T cd06649         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE----LEAIFGRPVVDGEEGEPHSISPRP  233 (331)
T ss_pred             ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHhcccccccccCCccccCccc
Confidence              22358999999999999999999999999999999999999996533211    1110000000              


Q ss_pred             ----------------cCchhHHhhhhcc---CCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          561 ----------------EGRIIEAADKRLN---GAF-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       561 ----------------~~~~~~~~d~~l~---~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                                      .....+..+....   ... .......+.+++.+||+.||++|||++++++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                            0000111111110   011 11234568899999999999999999999874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2e-36  Score=309.39  Aligned_cols=242  Identities=26%  Similarity=0.441  Sum_probs=198.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.+...   ...+|+|.+...  .....+|.+|+.++++++|+||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688899999999999999998643   457899988653  33456799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+++++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+||+++.++..++.|...     
T Consensus        84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          84 TEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            999999999999976443   48999999999999999999999   9999999999999999999999977211     


Q ss_pred             ---------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          498 ---------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       498 ---------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ...++..|+|||.+.+..++.++||||||+++|||++ |..||......    .+....            
T Consensus       158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~------------  221 (266)
T cd05033         158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ----DVIKAV------------  221 (266)
T ss_pred             ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH----HHHHHH------------
Confidence                     1123567999999999999999999999999999998 99998653321    111111            


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       ........+...+..+.+++..||+.+|++||++++|++.|++.
T Consensus       222 -~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         222 -EDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             -HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             11111122334566788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.6e-36  Score=309.17  Aligned_cols=241  Identities=23%  Similarity=0.426  Sum_probs=197.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..++||+|+||.||+|.... +..+|+|.+.......+.+.+|+.++++++|+||+++++.+...+..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            467888999999999999999764 5678999887655567789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +++|.+++....  ...+++.+++.++.|+++||+|||+   .+++||||||+||+++.++..++.|...          
T Consensus        85 ~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          85 KGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            999999997543  2348899999999999999999998   9999999999999999999999977211          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++..|+|||++....++.++|||||||++|||++ |+.||......    .......             ....
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~~-------------~~~~  222 (261)
T cd05072         160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS----DVMSALQ-------------RGYR  222 (261)
T ss_pred             ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH----HHHHHHH-------------cCCC
Confidence               1124567999999998889999999999999999998 99998653321    1111111             0111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      .......+..+.+++.+||+.+|++||+++++.+.|++
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         223 MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            11122344668889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-36  Score=308.13  Aligned_cols=242  Identities=28%  Similarity=0.435  Sum_probs=200.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|++|.||+|.... +..+|+|.++......+++.+|++++++++|+||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            4568888999999999999999764 577999998776556778999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++....  ...+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|...         
T Consensus        84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            9999999997644  2348999999999999999999998   9999999999999999999999987321         


Q ss_pred             -cccc---CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 -LTAG---TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 -~~~g---t~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                       ...|   +..|+|||++.+..++.++||||||+++|||++ |+.||......    .+..             .++...
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~-------------~~~~~~  221 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----EVLQ-------------QVDQGY  221 (261)
T ss_pred             cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHH-------------HHHcCC
Confidence             1112   347999999999999999999999999999999 99998654321    1111             111111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ....+......+.+++.+|++.+|.+||++.++++.|++
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         222 RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            112233456778999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.1e-36  Score=329.29  Aligned_cols=248  Identities=25%  Similarity=0.368  Sum_probs=199.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~  418 (645)
                      .++|...++||+|+||.||+|+...     .+..||||++...  ....+.+.+|+++++++. ||||++++++|.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            4678888999999999999998643     2346999998753  233567999999999996 9999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC----------------------------------------------------------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE----------------------------------------------------------  440 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  440 (645)
                      .||||||+++|+|.++|.....                                                          
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            9999999999999999875321                                                          


Q ss_pred             ----------------------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC
Q 041096          441 ----------------------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA  486 (645)
Q Consensus       441 ----------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~  486 (645)
                                                        ....+++.+++.++.|+++||+|||+   .+++||||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence                                              01247889999999999999999999   99999999999999999


Q ss_pred             CCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhH
Q 041096          487 NFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNL  551 (645)
Q Consensus       487 ~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l  551 (645)
                      ++.+|+.|...              ...++..|+|||.+.+..++.++|||||||++|||++ |..||........   +
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~---~  349 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST---F  349 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH---H
Confidence            99999977221              1235678999999999999999999999999999997 9999875422111   1


Q ss_pred             HHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       552 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .             ..+........+...+..+.+++..||+.+|++||++.+|.++|+...
T Consensus       350 ~-------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         350 Y-------------NKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             H-------------HHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            0             111111112233445677889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.8e-36  Score=307.04  Aligned_cols=234  Identities=26%  Similarity=0.413  Sum_probs=193.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      +.||+|+||.||+|+...++..+|+|.....  ......+.+|++++++++|+||++++++|...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3699999999999999888999999987652  33456799999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccccc------------
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------------  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~------------  499 (645)
                      .+++....   ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++..++.|.....            
T Consensus        81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  154 (252)
T cd05084          81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG  154 (252)
T ss_pred             HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence            99996543   238999999999999999999998   999999999999999999999998732111            


Q ss_pred             --ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          500 --AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       500 --~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                        .++..|+|||.+.++.++.++||||||+++|||++ |..||.......                 ....+........
T Consensus       155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-----------------~~~~~~~~~~~~~  217 (252)
T cd05084         155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-----------------TREAIEQGVRLPC  217 (252)
T ss_pred             CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-----------------HHHHHHcCCCCCC
Confidence              12346999999999999999999999999999998 888886532211                 1111112222233


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      +...+..+.+++..|++.+|++|||+.++++.|+
T Consensus       218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            4445667889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-37  Score=324.36  Aligned_cols=244  Identities=25%  Similarity=0.326  Sum_probs=198.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++...    ......+.+|++++..++||||+++++++.+.+..||||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4688899999999999999999988999999998752    233457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++....    .+++.+...++.|++.||.|||+   .+|+||||||+|||++.++.+||.|..       
T Consensus        81 e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          81 EYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            9999999999997543    38899999999999999999999   999999999999999999999998832       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+..|.       .   .+......
T Consensus       154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------~---~~~~~~~~  223 (333)
T cd05600         154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK-------E---TLQRPVYD  223 (333)
T ss_pred             ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc-------c---cccCCCCC
Confidence              23468999999999999999999999999999999999999997643222111111110       0   00000000


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .........+.+++..|+..+|.+||+++++++.
T Consensus       224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            0011234567788899999999999999999874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=8.8e-37  Score=310.85  Aligned_cols=243  Identities=24%  Similarity=0.395  Sum_probs=202.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +..+|...++||+|+||.||+|.... +..+++|.+..... ....+.+|+.+++.++|+||+++++++...+..++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34568888999999999999999987 88899999877443 46679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |+++++|.+++.....  ..+++.+++.++.|++.||+|||+   ++++||||||+||+++.++..++.|...       
T Consensus        83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          83 LMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKED  157 (261)
T ss_pred             ecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence            9999999999976432  348999999999999999999998   9999999999999999999999977211       


Q ss_pred             -----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          498 -----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       498 -----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...++..|+|||.+....++.++||||||++++||++ |+.||......    ....             .+...
T Consensus       158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~----~~~~-------------~~~~~  220 (261)
T cd05148         158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH----EVYD-------------QITAG  220 (261)
T ss_pred             cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH----HHHH-------------HHHhC
Confidence                 1134567999999998899999999999999999998 89999654321    1111             11122


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      .....+..++..+.+++.+||+.+|.+|||++++++.|+.
T Consensus       221 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         221 YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            2222334456778899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8.9e-37  Score=321.74  Aligned_cols=229  Identities=26%  Similarity=0.332  Sum_probs=191.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      ++||+|+||.||++....++..+|+|++...    ......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999989999999988752    233456889999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------c
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------T  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~  497 (645)
                      +|.+++....    .+++.+...++.||+.||+|||+   .+|+||||||+|||++.++.+|+.|..            .
T Consensus        81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  153 (323)
T cd05571          81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK  153 (323)
T ss_pred             cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence            9999997644    38999999999999999999999   999999999999999999999998732            1


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||...+..    .+....            ....  ..++
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~~------------~~~~--~~~p  215 (323)
T cd05571         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI------------LMEE--IRFP  215 (323)
T ss_pred             ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH----HHHHHH------------HcCC--CCCC
Confidence            235899999999999999999999999999999999999999753321    111111            0000  1223


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          578 EDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ......+.+++..||+.||++||     ++.++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            33455678889999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.2e-36  Score=311.21  Aligned_cols=244  Identities=24%  Similarity=0.418  Sum_probs=199.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|...+.||+|+||.||+|....     .+..+|+|.+.....  ..+.+.+|++++.+++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457778899999999999998743     357899999876432  4578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCC----------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          421 LVYEYMPNGSLDRMLYQDSE----------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +||||+++++|.+++.....          ....+++.++..++.|++.||+|||+   .+++||||||+||+++.++..
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence            99999999999999976432          22348899999999999999999998   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      +++|...              ...++..|+|||++.+..++.++|||||||++|||++ |..||......    ...+..
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~----~~~~~~  237 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE----EVIECI  237 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH
Confidence            9977321              1234567999999999999999999999999999998 99998754321    111111


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                   ........+...+..+.+++..||+.+|++||+++||++.|++
T Consensus       238 -------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         238 -------------TQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -------------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence                         1111112233455678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.6e-37  Score=324.09  Aligned_cols=235  Identities=24%  Similarity=0.283  Sum_probs=195.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||+|....++..+|+|.+...    ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5688889999999999999999988999999988652    233467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++.....++.|++.||+|||+   .+|+||||||+||||+.++.+|+.|..       
T Consensus        98 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGR----FPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             cCCCCChHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999999976543    7888999999999999999999   999999999999999999999998732       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .....            +....+  
T Consensus       171 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~------------i~~~~~--  232 (329)
T PTZ00263        171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIYEK------------ILAGRL--  232 (329)
T ss_pred             CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHHHH------------HhcCCc--
Confidence              2246899999999999999999999999999999999999999753221    11110            011111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .++......+.+++..||+.||.+||+     +++++.
T Consensus       233 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        233 KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            122223455778999999999999997     677764

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.6e-36  Score=310.61  Aligned_cols=246  Identities=24%  Similarity=0.384  Sum_probs=197.4

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      ++++|+..+.||+|+||.||+|.+..     .+..+|+|.+....  ....++.+|+.+++.++|+||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            46779999999999999999998642     35679999876532  345578999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      .++||||+++++|.+++......      ...+++.+++.++.|++.||+|||+   .+++||||||+||++++++.+++
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            99999999999999999754321      2246889999999999999999999   89999999999999999999999


Q ss_pred             ecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHh
Q 041096          493 ESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       493 ~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      .|...              ...++..|+|||.+.++.++.++|||||||++|||++ |..||......    .....+  
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~----~~~~~~--  234 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE----QVLRFV--  234 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHH--
Confidence            77321              1234667999999998899999999999999999999 78888654321    111110  


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                        ..+        . ....+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       235 --~~~--------~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         235 --MEG--------G-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             --HcC--------C-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence              000        0 011233345678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=6.7e-36  Score=305.04  Aligned_cols=247  Identities=27%  Similarity=0.396  Sum_probs=204.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|....++..+|+|.++.    .....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            578889999999999999999988899999998753    2233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.........+++.+++.++.|+++||+|||+   .+++||||||+||+++.++..++.|..       
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            9999999999997654444558999999999999999999998   999999999999999999999997721       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....++..|+|||.+.+..++.++|||||||++|||++|+.||.....     ...+.          .+.....
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~----------~~~~~~~  223 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSL----------CKKIEKC  223 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-----cHHHH----------HhhhhcC
Confidence                 123578889999999988899999999999999999999999865321     11111          1111111


Q ss_pred             ccCCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          572 LNGAFNE-DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       572 l~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .....+. .....+.+++..||+.+|++||++.+|+++|++.
T Consensus       224 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         224 DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            1112222 4556788999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.8e-36  Score=306.95  Aligned_cols=238  Identities=26%  Similarity=0.403  Sum_probs=194.9

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +|...+.||+|+||.||+|.... +..+|+|.+........+|.+|+.++.+++||||++++++|.+.+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            46777899999999999998764 45699998876555567899999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----------  497 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----------  497 (645)
                      |+|.+++.....   .+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.+|+.|...           
T Consensus        84 ~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05113          84 GCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS  157 (256)
T ss_pred             CcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence            999999976433   38999999999999999999998   9999999999999999999999987321           


Q ss_pred             --ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          498 --LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ...++..|+|||.+.+..++.++|||||||++|||++ |+.||.......    .....             ......
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~----~~~~~-------------~~~~~~  220 (256)
T cd05113         158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE----TVEKV-------------SQGLRL  220 (256)
T ss_pred             cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH----HHHHH-------------hcCCCC
Confidence              1123467999999998889999999999999999998 999986543211    11111             111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ..+......+.+++..||+.+|.+||++.++++.|+
T Consensus       221 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            112223567889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.9e-36  Score=307.51  Aligned_cols=242  Identities=26%  Similarity=0.477  Sum_probs=197.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC---eEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|....++   ..+++|.+...  ....+.+..|++++.+++|+|++++.+++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            46788899999999999999986544   37899988653  33456799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----  498 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----  498 (645)
                      |||+++++|.+++.....   .+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|....    
T Consensus        85 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          85 TEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            999999999999975432   38999999999999999999998   99999999999999999999999772211    


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ...+..|+|||++..+.++.++|||||||++|||++ |+.||......    .+..             
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~----~~~~-------------  221 (268)
T cd05063         159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH----EVMK-------------  221 (268)
T ss_pred             cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH----HHHH-------------
Confidence                       112346999999998899999999999999999997 99999654321    1111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .+..........+.+..+.+++.+||+.+|++||+|.+|++.|+++
T Consensus       222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1111111122334566789999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.4e-37  Score=319.62  Aligned_cols=234  Identities=26%  Similarity=0.377  Sum_probs=199.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|...+.||+|.||.||||+.+.+.+.||+|.+.+...   ..+...+|++++++|+|||||.++.||+...++|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            467777889999999999999999999999998877433   34568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      |+.+ +|..+|.....    ++..+...|+.++.+||.|||+   .+|+|||+||+||||+.++..|++|.         
T Consensus        82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~  153 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN  153 (808)
T ss_pred             hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence            9966 99999987654    9999999999999999999999   99999999999999999999999882         


Q ss_pred             ---ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          496 ---FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         .+...||+.|||||+..++.|+..+|.||+||+|||+++|++||....    ...+++.   ...        |+  
T Consensus       154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s----i~~Lv~~---I~~--------d~--  216 (808)
T KOG0597|consen  154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS----ITQLVKS---ILK--------DP--  216 (808)
T ss_pred             ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH----HHHHHHH---Hhc--------CC--
Confidence               223469999999999999999999999999999999999999997532    1122211   111        11  


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       -.++......+..+....+.+||.+|.|-.++++
T Consensus       217 -v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  217 -VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             -CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence             1234466677888888999999999999999876

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-36  Score=319.86  Aligned_cols=238  Identities=27%  Similarity=0.377  Sum_probs=198.0

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----c--chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCC
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----H--EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKG  417 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~--~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~  417 (645)
                      ...++|...+.||+|.||+|++|....++..||+|.+...    .  ...+...+|+.++++++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457888999999999999999999999999999976553    1  23445668999999999 999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeecc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESS-  495 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~-  495 (645)
                      ..++||||+.+|+|.+++.+...    +.......++.|+++|++|||+   ++|+||||||+|||||.+ ++.|+.|. 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~----l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG  166 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGR----LKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFG  166 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCC----CChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence            99999999999999999987433    8889999999999999999999   999999999999999999 99999872 


Q ss_pred             -----------ccccccCCcccCcccccCCC-CC-cchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          496 -----------FTLTAGTMGYLAPEYLQYGT-AT-EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       496 -----------~~~~~gt~~y~APE~~~~~~-~t-~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                 ....+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+..+..    .+...        
T Consensus       167 ~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~----~l~~k--------  234 (370)
T KOG0583|consen  167 LSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP----NLYRK--------  234 (370)
T ss_pred             cccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH----HHHHH--------
Confidence                       23358999999999999977 85 7899999999999999999999873221    11100        


Q ss_pred             chhHHhhhhccCCCCHHH-HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDE-MKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          +.....  .++... ...+..++..|+..+|.+|+|+.++++
T Consensus       235 ----i~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  235 ----IRKGEF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             ----HhcCCc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence                011111  223333 667788889999999999999999984

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.4e-36  Score=311.80  Aligned_cols=247  Identities=26%  Similarity=0.458  Sum_probs=198.7

Q ss_pred             cCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...+.||+|+||+||++...     .++..+|+|.+... ....+.+.+|++++.+++|+||++++++|...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            46788899999999999999852     34567899988763 3446679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCC---------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          422 VYEYMPNGSLDRMLYQDSE---------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      ||||+++++|.+++.....         ....+++.+++.++.|++.||+|||+   .+++||||||+|||++.++..++
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence            9999999999999975431         12348999999999999999999998   99999999999999999999999


Q ss_pred             ecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHh
Q 041096          493 ESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       493 ~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      .|...              ...++..|+|||.+.+..++.++|||||||+++||++ |..||.......    ....+  
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~----~~~~i--  235 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----VIECI--  235 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH--
Confidence            77321              1223668999999999999999999999999999998 899986543211    11111  


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                        ..+.         ....+......+.+++..||+++|.+|||++++++.|++...
T Consensus       236 --~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         236 --TQGR---------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             --HcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence              1111         011122234568999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3.5e-36  Score=310.26  Aligned_cols=245  Identities=25%  Similarity=0.382  Sum_probs=193.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..+.||+|+||.||+|.+..++.    .+++|.+...  .....++..|+..+++++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            356778899999999999999866555    4777877542  2234678888889999999999999998864 46789


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ++||+++|+|.+++.....   .++|..++.++.|++.||+|||+   ++++||||||+|||++.++.+|+.|..     
T Consensus        86 i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             EEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            9999999999999976443   38999999999999999999998   999999999999999999999998731     


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....++..|+|||.+.++.++.++|||||||++|||++ |+.||......    .+.+.            
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~------------  223 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDL------------  223 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH------------
Confidence                     11235678999999998999999999999999999998 99998754321    11111            


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                       +........+..+...+.+++..||..+|++|||+.++++.|......+
T Consensus       224 -~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         224 -LEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             -HHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence             1111111111223456778889999999999999999999998765433

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-36  Score=305.81  Aligned_cols=238  Identities=25%  Similarity=0.402  Sum_probs=195.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +|+..+.||+|+||.||+|.... +..+|+|.+.........+.+|++++++++|+||+++++++...+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            46678899999999999998864 66789998876555566789999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----------  498 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----------  498 (645)
                      ++|.+++.....   .+++..++.++.|++.||+|||+   .+++||||||+||+++.++..|+.|....          
T Consensus        84 ~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~  157 (256)
T cd05059          84 GCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS  157 (256)
T ss_pred             CCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence            999999976433   38999999999999999999999   99999999999999999999999873211          


Q ss_pred             ---cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          499 ---TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       499 ---~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                         ..++..|+|||.+.+..++.++||||||+++|||++ |+.||......+    ...             .+......
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~-------------~~~~~~~~  220 (256)
T cd05059         158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE----VVE-------------SVSAGYRL  220 (256)
T ss_pred             cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH----HHH-------------HHHcCCcC
Confidence               112347999999999999999999999999999999 888987543211    111             11111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ..+...+..+.+++..||+.+|++||||.++++.|.
T Consensus       221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            223335667899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3.6e-36  Score=312.08  Aligned_cols=247  Identities=25%  Similarity=0.441  Sum_probs=199.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...+.||+|+||.||+|....     ++..+++|.+.... ...+.+.+|++++++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            457778899999999999998532     34568899887643 335679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC
Q 041096          422 VYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN  489 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~  489 (645)
                      ||||+++++|.+++.....            ....++|..++.++.|++.||+|||+   ++++||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            9999999999999975431            12348999999999999999999998   99999999999999999999


Q ss_pred             eeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHH
Q 041096          490 ARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       490 ~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~  554 (645)
                      +++.|..              ....++..|+|||.+.+..++.++|||||||++|||++ |+.||.......    ..+.
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~~~~  237 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----VIEC  237 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHH
Confidence            9997722              11234678999999999999999999999999999998 999986543211    1111


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                                   +........+...+..+.+++.+||+.+|++||++++|+++|+.+..
T Consensus       238 -------------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         238 -------------ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             -------------HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence                         11111111223345678899999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.9e-36  Score=317.89  Aligned_cols=229  Identities=25%  Similarity=0.335  Sum_probs=190.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      +.||+|+||.||++....++..||+|.+...    ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999999888999999988652    234456788999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------c
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------T  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~  497 (645)
                      +|..++....    .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..            .
T Consensus        81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  153 (323)
T cd05595          81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  153 (323)
T ss_pred             cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence            9999887543    38999999999999999999999   999999999999999999999998722            1


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    .....            ....  ..++
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----~~~~~------------~~~~--~~~p  215 (323)
T cd05595         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER----LFELI------------LMEE--IRFP  215 (323)
T ss_pred             cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH----HHHHH------------hcCC--CCCC
Confidence            2358999999999999999999999999999999999999997543211    11100            0000  0122


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          578 EDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ......+.+++..||+.||.+||     +++++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            33445677888999999999998     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.6e-36  Score=311.72  Aligned_cols=253  Identities=19%  Similarity=0.258  Sum_probs=193.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|...++||+|+||.||+|....++..||+|.+...  ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4688889999999999999999988999999988653  22345678999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      ++ ++|.+++.....   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++..|++|..         
T Consensus        85 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~  157 (288)
T cd07871          85 LD-SDLKQYLDNCGN---LMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT  157 (288)
T ss_pred             CC-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence            97 599998865432   37899999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhc-cCch
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYA-EGRI  564 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~-~~~~  564 (645)
                         ....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+....+....       |.... ....
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07871         158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF  237 (288)
T ss_pred             ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence               12357889999998865 568999999999999999999999997643322111111100       00000 0000


Q ss_pred             hHHhhhhccCCC----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAF----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .....+......    .........+++..|++.||.+|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000101100000    0112345678899999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.8e-36  Score=316.31  Aligned_cols=240  Identities=27%  Similarity=0.335  Sum_probs=204.0

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ..++|+..++||+|+||.||+++-+++|.++|+|+++++    ....+..+.|-.+|....++.||+|+-.|.+.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            456899999999999999999999999999999999884    3456678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-------
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-------  494 (645)
                      ||||+|||++..+|.....    |+.......+.+++.|+.-||+   .|+|||||||+|+|||..|..|+.|       
T Consensus       219 iMEylPGGD~mTLL~~~~~----L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDT----LTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             EEEecCCccHHHHHHhcCc----CchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchh
Confidence            9999999999999987654    8888888899999999999999   9999999999999999999999976       


Q ss_pred             -------------------------ccc---------------------------ccccCCcccCcccccCCCCCcchhH
Q 041096          495 -------------------------SFT---------------------------LTAGTMGYLAPEYLQYGTATEKTDV  522 (645)
Q Consensus       495 -------------------------~~~---------------------------~~~gt~~y~APE~~~~~~~t~ksDV  522 (645)
                                               .+.                           ..+|||-|||||++.+..|+..+|+
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw  371 (550)
T KOG0605|consen  292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW  371 (550)
T ss_pred             hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence                                     000                           0369999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-
Q 041096          523 FSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-  601 (645)
Q Consensus       523 ~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-  601 (645)
                      ||+|||+|||+.|.+||...+..+....++.|...+...              -.........+++..|+. ||++|.- 
T Consensus       372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP--------------~~~~~s~eA~DLI~rll~-d~~~RLG~  436 (550)
T KOG0605|consen  372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP--------------EEVDLSDEAKDLITRLLC-DPENRLGS  436 (550)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC--------------CcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence            999999999999999999988777777888876332211              111122556677777777 9999976 


Q ss_pred             --HHHHHH
Q 041096          602 --MRRVFQ  607 (645)
Q Consensus       602 --~~~vl~  607 (645)
                        ++||.+
T Consensus       437 ~G~~EIK~  444 (550)
T KOG0605|consen  437 KGAEEIKK  444 (550)
T ss_pred             ccHHHHhc
Confidence              555544

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=319.22  Aligned_cols=227  Identities=24%  Similarity=0.270  Sum_probs=187.3

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||.||+|....++..+|+|++...    ......+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999999988999999988652    33456788999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------ccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------TLT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~~~  499 (645)
                      .+++....    .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+++.|..            ...
T Consensus        81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  153 (312)
T cd05585          81 FHHLQREG----RFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF  153 (312)
T ss_pred             HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence            99997643    28999999999999999999999   999999999999999999999998732            123


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||.......    ...   .         .....  ..++..
T Consensus       154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~----~~~---~---------~~~~~--~~~~~~  215 (312)
T cd05585         154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE----MYR---K---------ILQEP--LRFPDG  215 (312)
T ss_pred             cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH----HHH---H---------HHcCC--CCCCCc
Confidence            58999999999999999999999999999999999999997532211    111   0         11111  122333


Q ss_pred             HHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARPS---MRRVFQ  607 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt---~~~vl~  607 (645)
                      ....+.+++..||+.||.+||+   +.+++.
T Consensus       216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            4456788889999999999986   455543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=7.9e-36  Score=302.58  Aligned_cols=238  Identities=26%  Similarity=0.395  Sum_probs=198.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|...+.||+|++|.||+|....++..+++|.+..   .......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            46778899999999999999998899999998764   234567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....  ...+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+++.|..         
T Consensus        81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence            99999999998653  2348999999999999999999998   999999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||+..+..++.++||||||+++|||++|+.||......    .....             ......
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~-------------~~~~~~  218 (256)
T cd08529         156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG----ALILK-------------IIRGVF  218 (256)
T ss_pred             chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHH-------------HHcCCC
Confidence               1235788999999999999999999999999999999999999754321    11111             011111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...+......+.+++.+||+.+|++||++.++++.
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            22233455678999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.5e-36  Score=308.33  Aligned_cols=245  Identities=24%  Similarity=0.360  Sum_probs=197.8

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      .+++|...+.||+|++|.||+|.+..     .+..+++|.....  ......|.+|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34678889999999999999999976     6788999988653  3345679999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC---CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceee
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARL  492 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl  492 (645)
                      .++||||+++++|.+++.....   ....++|.+++.++.||+.||+|||+   .+++||||||+||+++.++   ..|+
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence            9999999999999999976532   12348999999999999999999999   8999999999999998754   4777


Q ss_pred             eccccc--------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHh
Q 041096          493 ESSFTL--------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       493 ~d~~~~--------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      +|....              ...+..|+|||++.+..++.++|||||||++|||++ |+.||......    .+.+    
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~----~~~~----  232 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ----EVME----  232 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH----
Confidence            763211              112457999999999999999999999999999997 99999754321    1111    


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                               .+........+...+..+.+++..|++.+|++||++.+|++.|+
T Consensus       233 ---------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         233 ---------FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             ---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence                     11111112233344567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.9e-37  Score=316.69  Aligned_cols=251  Identities=24%  Similarity=0.352  Sum_probs=194.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~  423 (645)
                      .|+..++||+|.||.||+|+...+|..||+|++....   .......+||.+|++|.||||++|.+...+.  ..+|||+
T Consensus       118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF  197 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF  197 (560)
T ss_pred             HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence            3555678999999999999999999999999987633   3345678999999999999999999988776  6899999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec---------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d---------  494 (645)
                      |||++ +|..++....-   .++..++..+++|++.||+|||+   ++|+|||||.+|||||.++..||.|         
T Consensus       198 eYMdh-DL~GLl~~p~v---kft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  198 EYMDH-DLSGLLSSPGV---KFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             ecccc-hhhhhhcCCCc---ccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            99965 88888876443   38999999999999999999999   9999999999999999999999988         


Q ss_pred             ----cccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh----hhccCchh
Q 041096          495 ----SFTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG----LYAEGRII  565 (645)
Q Consensus       495 ----~~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~----~~~~~~~~  565 (645)
                          ..+..+-|.+|+|||.+.+ ..|+.+.|+||.||||.||+.|+..|.+.++-+....+......    .|...++.
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP  350 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP  350 (560)
T ss_pred             CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence                2345578999999999987 47999999999999999999999999876543222222211000    01100110


Q ss_pred             --HHh------hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 --EAA------DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 --~~~------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ..+      ...+.+. ........++|+..+|..||.+|.|+.++++
T Consensus       351 ~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  351 HATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence              000      0111111 1122445677778888999999999999986

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.7e-36  Score=305.93  Aligned_cols=248  Identities=25%  Similarity=0.377  Sum_probs=201.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..++||.+...    .....++.+|+.+++.++|+||+++++++.+++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4677788999999999999999888999999977542    233467899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.........+++.+++.++.|++.||+|||+   .+++|+||||+||+++.++.+++.|..       
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            9999999999987544334458999999999999999999998   999999999999999999999997721       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....|+..|+|||.+.+..++.++||||||+++|||++|..||......  .......         +.   ...
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~---------~~---~~~  224 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKK---------IE---QCD  224 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch--HHHHhhh---------hh---cCC
Confidence                 1235788999999999889999999999999999999999998653221  0111110         00   000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ............+.+++..||+.+|++||||.+|++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         225 YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            01111223456788899999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.4e-36  Score=332.82  Aligned_cols=239  Identities=21%  Similarity=0.263  Sum_probs=195.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCC-CeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASS-GSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~-~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .|...+.||+|+||.||+|....+ +..||+|.+.... .....+.+|+.+++.++||||++++++|...+..||||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            378889999999999999988766 6788888765533 33456788999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++|+|.++|........++++..+..++.|++.||+|||+   ++|+||||||+||||+.++.+|+.|..          
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            9999999987654334458999999999999999999999   999999999999999999999998721          


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...+||++|+|||++.+..++.++|||||||++|||++|+.||......    .+....            .... 
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~----~~~~~~------------~~~~-  287 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR----EIMQQV------------LYGK-  287 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH------------HhCC-
Confidence                1235899999999999999999999999999999999999999753321    111110            0000 


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ....+......+.+++..||+.+|++||+++++++
T Consensus       288 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        288 YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            01122234456888999999999999999998864

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=5.4e-36  Score=309.27  Aligned_cols=244  Identities=25%  Similarity=0.417  Sum_probs=196.2

Q ss_pred             cCCCcCceeccCCceEEEEEEEC----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .+|+..+.||+|+||.||+|...    ..+..+++|.+...  .+....+.+|++++++++|+||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            35777889999999999999852    34578999988752  2334678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCC-------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          422 VYEYMPNGSLDRMLYQDSE-------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      ||||+++++|.+++.....             ....+++.+.+.++.|++.||+|||+   ++++||||||+|||++.++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence            9999999999999864321             12348899999999999999999999   9999999999999999999


Q ss_pred             Ceeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHH
Q 041096          489 NARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       489 ~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~  553 (645)
                      .+|+.|...              ...++..|+|||++.+..++.++||||||+++|||++ |..||.....    ..+. 
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~----~~~~-  236 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN----QEVI-  236 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHH-
Confidence            999987221              1234567999999998889999999999999999998 9889865321    1111 


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                  +.++.......+......+.+++..||+.+|++||++.++.+.|..
T Consensus       237 ------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         237 ------------EMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ------------HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                        1111111112333445678889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=2.9e-36  Score=312.74  Aligned_cols=247  Identities=24%  Similarity=0.386  Sum_probs=200.0

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCC-----CeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASS-----GSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      ..++|+..+.||+|+||.||++.....     ...+|+|.+...  .....++.+|++++.++ +|+||++++++|..++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            345688889999999999999987533     378999988753  23345788999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcC------------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDS------------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..+++|||+++|+|..++....            .....+++..++.++.|++.||+|||+   .+++||||||+|||++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence            9999999999999999997532            223458999999999999999999998   9999999999999999


Q ss_pred             CCCCeeeeccccc--------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhh
Q 041096          486 ANFNARLESSFTL--------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~~~~--------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~  550 (645)
                      .++..+++|....              ..++..|+|||.+.+..++.++|||||||++|||++ |..||.......    
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----  242 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----  242 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH----
Confidence            9999999883211              123567999999999999999999999999999998 999986532211    


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +.             +.+........+......+.+++..||+.+|++|||++++++.|+.+
T Consensus       243 ~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         243 LF-------------KLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HH-------------HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            11             11111111223334566788999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=7.5e-36  Score=316.05  Aligned_cols=250  Identities=25%  Similarity=0.357  Sum_probs=196.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..++||+|+||.||++....++..+|+|.+...  ......+.+|++++++++|+||++++++|.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            36788999999999999999999988999999987653  2334678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++....    .+++.....++.|++.||.|||+  ..+++||||||+|||++.++.+|+.|..        
T Consensus        84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~  157 (333)
T cd06650          84 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  157 (333)
T ss_pred             cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence            999999999997643    38899999999999999999997  2479999999999999999999998732        


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC------------
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG------------  562 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~------------  562 (645)
                        ....|+..|+|||++.+..++.++|||||||++|||++|+.||.......    + .........+            
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~  232 (333)
T cd06650         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE----L-ELMFGCPVEGDPAESETSPRPR  232 (333)
T ss_pred             ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH----H-HHHhcCcccCCccccccCcccC
Confidence              22358899999999998899999999999999999999999997543211    0 0000000000            


Q ss_pred             -----------------chhHHhhhhccC---CCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 -----------------RIIEAADKRLNG---AFNE-DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 -----------------~~~~~~d~~l~~---~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                       ......+.....   ..+. .....+.+++.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                             000111111110   0110 12345788999999999999999999976

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.9e-36  Score=316.38  Aligned_cols=256  Identities=22%  Similarity=0.311  Sum_probs=193.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----CeEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GELL  420 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~  420 (645)
                      +|+..++||+|+||.||+|....++..||||++...   ......+.+|++++++++||||+++++++...     ...|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            477889999999999999999988999999988642   23345688999999999999999999987543     2589


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+. ++|.+++....    .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|..    
T Consensus        81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~  152 (338)
T cd07859          81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARV  152 (338)
T ss_pred             EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence            9999995 78999887543    38999999999999999999999   999999999999999999999998722    


Q ss_pred             -----------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh----
Q 041096          497 -----------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY----  559 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~----  559 (645)
                                 ....||..|+|||++.+  ..++.++|||||||++|||++|+.||.......    ....+....    
T Consensus       153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~----~~~~~~~~~~~~~  228 (338)
T cd07859         153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH----QLDLITDLLGTPS  228 (338)
T ss_pred             cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHHHHHhCCCC
Confidence                       12358899999999875  678999999999999999999999997643211    111111100    


Q ss_pred             -------ccCchhHHh---hhhccCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          560 -------AEGRIIEAA---DKRLNGAFN---EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       560 -------~~~~~~~~~---d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                             ......+.+   .+.......   ......+.+++..||+.+|++|||++++++  .+++.....
T Consensus       229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~  300 (338)
T cd07859         229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVE  300 (338)
T ss_pred             HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccc
Confidence                   000001111   110000000   012345778999999999999999999987  355544433

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3.7e-36  Score=320.97  Aligned_cols=234  Identities=23%  Similarity=0.358  Sum_probs=186.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      |+..++||+|+||.||+|+...++..||||.+...  ......+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            44567899999999999999888999999998653  2335678999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +|+|....        ...+..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..           
T Consensus       156 ~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        156 GGSLEGTH--------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             CCcccccc--------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            99986532        25677788999999999999999   999999999999999999999998732           


Q ss_pred             -cccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -TLTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                       ....||..|+|||.+..     ...+.++|||||||++|||++|+.||....... ...+...             ...
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~-------------~~~  290 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-WASLMCA-------------ICM  290 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHH-------------Hhc
Confidence             23468999999998753     234568999999999999999999997432211 1111110             000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .............+.+++..||+.||++||++.|+++.
T Consensus       291 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        291 SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            01112233445678889999999999999999999984

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.4e-36  Score=309.24  Aligned_cols=253  Identities=25%  Similarity=0.405  Sum_probs=198.2

Q ss_pred             CCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLL  421 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~l  421 (645)
                      |...+.||+|+||+||++..    ...+..+|+|......  .....+.+|++++++++||||++++++|...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37788999999999988653    3457789999887632  3456789999999999999999999998764  36899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----  497 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----  497 (645)
                      ||||+++++|.+++....     +++.++..++.|++.||+|||+   .+++||||||+|||++.++.+++.|...    
T Consensus        86 v~e~~~~~~l~~~~~~~~-----l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHK-----LNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             EecCCCCCCHHHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeeccccccc
Confidence            999999999999996532     8999999999999999999999   9999999999999999999999977211    


Q ss_pred             -----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 -----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 -----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ...++..|+|||.+....++.++||||||+++|||++|+.|+......  ................+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~  235 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIE  235 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhh
Confidence                       113455699999999888999999999999999999999998653221  1111111111111122333


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .++.......+...+..+.+++..||+++|++|||++++++.|+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            3333333333445567899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-37  Score=291.69  Aligned_cols=251  Identities=25%  Similarity=0.313  Sum_probs=205.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-----eEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-----ELL  420 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~  420 (645)
                      .++|++.++||+|||+.||+++.-.++..+|+|++... .++.+..++|++..++++|||++++++++..+.     +.|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            46788999999999999999998888999999998774 467888999999999999999999999986543     589


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc--
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL--  498 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~--  498 (645)
                      |+++|...|+|.+.+......+..++..+.+.|+.+|++||++||+. .+++.||||||.|||+.+.+.+.+.|..+.  
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence            99999999999999998777777899999999999999999999982 345999999999999999999988773222  


Q ss_pred             -------------------cccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          499 -------------------TAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       499 -------------------~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                                         ..-|..|+|||.+.-   ...++++|||||||+||+|+.|..||+...+......+.    
T Consensus       179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA----  254 (302)
T KOG2345|consen  179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA----  254 (302)
T ss_pred             cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe----
Confidence                               235788999998864   456999999999999999999999998754322111110    


Q ss_pred             hhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       557 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                                +....+.-.......+.+.+++.+|++.||.+||+..+++..++.+
T Consensus       255 ----------v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  255 ----------VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             ----------eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence                      0111111111122567899999999999999999999999988754

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=4.1e-36  Score=318.55  Aligned_cols=248  Identities=25%  Similarity=0.380  Sum_probs=196.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC-Ce
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK-GE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~~  418 (645)
                      ++|+..+.||+|+||.||+|....     ++..||+|++...  ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            468889999999999999997533     3478999988753  22345688899999999 799999999988654 57


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC---------------------------------------------------------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN---------------------------------------------------------  441 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~---------------------------------------------------------  441 (645)
                      +++++||+++++|.+++......                                                         
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            89999999999999998643210                                                         


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------------ccccCCcccC
Q 041096          442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------------LTAGTMGYLA  507 (645)
Q Consensus       442 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------------~~~gt~~y~A  507 (645)
                      ...++|..+..++.||+.||+|||+   .+|+||||||+|||++.++.+++.|...              ...++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence            1258999999999999999999998   9999999999999999999999987321              1234568999


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHH
Q 041096          508 PEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLL  586 (645)
Q Consensus       508 PE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~  586 (645)
                      ||++.+..++.++|||||||++|||++ |+.||......+.   +.             +.+........+......+.+
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~  307 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---FC-------------RRLKEGTRMRAPEYATPEIYS  307 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---HH-------------HHHhccCCCCCCccCCHHHHH
Confidence            999999999999999999999999998 9999975322111   10             111111111222334567889


Q ss_pred             HHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          587 VGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       587 l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ++++||+.+|++||++.++++.|+...+
T Consensus       308 l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999986544

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-36  Score=309.26  Aligned_cols=240  Identities=23%  Similarity=0.318  Sum_probs=195.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +|+..++||+|+||+||++....++..||+|.+....    .....+.+|+.++++++|+||+++++++..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4777899999999999999998889999999886522    223557889999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++|+|.+++.....  ..+++..+..++.|++.||+|||+   .+++||||||+||++++++.+++.|..        
T Consensus        81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          81 LMNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             ccCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            9999999998865322  348999999999999999999999   999999999999999999999997721        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||++.+..++.++|||||||++|||++|+.||...........+             ...+.. ..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~-------------~~~~~~-~~  221 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV-------------ERRVKE-DQ  221 (285)
T ss_pred             CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHH-------------HHHhhh-cc
Confidence               1236789999999999889999999999999999999999999764321111011             111111 11


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ..++......+.+++..||+.||++||     +++++++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            223344566788999999999999999     8888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=7.2e-36  Score=309.56  Aligned_cols=246  Identities=22%  Similarity=0.361  Sum_probs=197.5

Q ss_pred             CCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +|+..+.||+|+||.||+|....     ....+++|.+....  .....+.+|+.+++.++||||+++++.|...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            36778899999999999998742     23578888876532  334678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCC--------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          422 VYEYMPNGSLDRMLYQDSE--------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      ++||+++++|.+++.....                    ....+++.+++.++.|++.||+|||+   .+++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            9999999999999865321                    12348899999999999999999998   999999999999


Q ss_pred             EEEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccccc
Q 041096          482 IMLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGH  546 (645)
Q Consensus       482 Illd~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~  546 (645)
                      ||+++++.+++.|...              ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.....  
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--  235 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP--  235 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence            9999999999977321              1234668999999988899999999999999999998 9999865321  


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                        ..+.+             .+........+......+.+++..||+.+|++||++.++++.|++...
T Consensus       236 --~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         236 --ERLFN-------------LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             --HHHHH-------------HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence              11111             111111222233445678899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=7.2e-36  Score=308.21  Aligned_cols=235  Identities=25%  Similarity=0.300  Sum_probs=190.6

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||+||++....+++.+|+|.+....    ...+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999999889999999886522    2335678899999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------------cc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------LT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------------~~  499 (645)
                      ..++.........+++..+..++.|++.||+|||+   .+|+||||||+||+++.++..++.|...            ..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence            98886544334458999999999999999999999   9999999999999999999999977321            23


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+..            ......  ..++..
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------~~~~~~--~~~~~~  223 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------------RILNDS--VTYPDK  223 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH------------hhcccC--CCCccc
Confidence            578999999999999999999999999999999999999975432111111110            000110  122334


Q ss_pred             HHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ....+.+++..||+.+|++||     +++++++
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            556788899999999999999     6777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.1e-35  Score=310.35  Aligned_cols=254  Identities=19%  Similarity=0.224  Sum_probs=192.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|.+....  .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467889999999999999999998889999999987532  234467899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |++ ++|.+++.....   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++..|++|..        
T Consensus        84 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  156 (303)
T cd07869          84 YVH-TDLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP  156 (303)
T ss_pred             CCC-cCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence            995 788888865432   38889999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch---hH--
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI---IE--  566 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~---~~--  566 (645)
                          ....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............+............   ..  
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T cd07869         157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP  236 (303)
T ss_pred             CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence                12357889999998865 458999999999999999999999997643211111111111100000000   00  


Q ss_pred             Hhhh-hccCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADK-RLNGAFNE---------DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~-~l~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..++ ......+.         .....+.+++..|++.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            0000 00000000         01245678889999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4.4e-36  Score=317.16  Aligned_cols=230  Identities=27%  Similarity=0.342  Sum_probs=190.7

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      ++||+|+||.||++....++..+|+|++...    ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999988999999988752    234567889999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------c
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------T  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~  497 (645)
                      +|..++....    .+++.++..++.||+.||+|||+   .+|+||||||+||||+.++.+|+.|..            .
T Consensus        81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  153 (328)
T cd05593          81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK  153 (328)
T ss_pred             CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence            9999887543    38999999999999999999999   999999999999999999999998732            1


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||...+..    .+....   .. .      +    ..++
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~----~~~~~~---~~-~------~----~~~p  215 (328)
T cd05593         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI---LM-E------D----IKFP  215 (328)
T ss_pred             cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH----HHHHHh---cc-C------C----ccCC
Confidence            235899999999999999999999999999999999999999754321    111110   00 0      0    1122


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 041096          578 EDEMKRLLLVGLSCANPDSSARP-----SMRRVFQI  608 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~~  608 (645)
                      ......+.+++..|++.||++||     ++.++++.
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            23345677888999999999997     88988763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=5.2e-36  Score=318.00  Aligned_cols=237  Identities=21%  Similarity=0.251  Sum_probs=194.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCC-eEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSG-SVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|...+.||+|+||.||+|.+...+ ..+|+|++...    ....+.+.+|+.++..++||||+++++++.+.+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            356888999999999999999876544 68999987642    2335578899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++.....    +++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+++.|..     
T Consensus       109 v~Ey~~~g~L~~~i~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNKR----FPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            9999999999999976543    8999999999999999999999   999999999999999999999998732     


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    ....            +.... 
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----~~~~------------i~~~~-  244 (340)
T PTZ00426        182 DTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL----IYQK------------ILEGI-  244 (340)
T ss_pred             CCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH----HHHH------------HhcCC-
Confidence                22368999999999999889999999999999999999999997643211    1110            00000 


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQI  608 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~~  608 (645)
                       ..++......+.+++..|++.+|++|+     +++++++.
T Consensus       245 -~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        245 -IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             -CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence             012223344567888999999999995     89988763

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.8e-36  Score=310.58  Aligned_cols=249  Identities=26%  Similarity=0.415  Sum_probs=199.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe--EEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS--VAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~--~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..++||+|+||.||+|....++.  .+++|.++.  .....+.+.+|++++.++ +||||+++++++...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            468888999999999999999876654  468887764  233456789999999999 799999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          423 YEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +||+++++|.+++.....            ....+++.++..++.|++.||+|||+   .+++||||||+|||++.++..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            999999999999975431            11248899999999999999999998   999999999999999999999


Q ss_pred             eeeccccc-----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhh
Q 041096          491 RLESSFTL-----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       491 kl~d~~~~-----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      |+.|....           ...+..|+|||++....++.++|||||||++|||++ |+.||......    .+.      
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~----~~~------  228 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA----ELY------  228 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHH------
Confidence            99873211           122456999999998899999999999999999997 99999754321    111      


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                             +..........+......+.+++..||+.+|.+||+++++++.|+......
T Consensus       229 -------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         229 -------EKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             -------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                   111111222223344567889999999999999999999999988766544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.1e-36  Score=332.86  Aligned_cols=247  Identities=23%  Similarity=0.286  Sum_probs=201.0

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-  417 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-  417 (645)
                      +.+...++|...++||+|+||+||+|....++..||||++...   ......+.+|+.++..++|+|++++...+...+ 
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            3445567999999999999999999999888999999988653   334567889999999999999999988765432 


Q ss_pred             -------eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          418 -------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       418 -------~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                             ..++||||+++|+|.+++.........+++..+..++.|++.||+|||+   ++|+||||||+||||+.++.+
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCE
Confidence                   3689999999999999998655445568999999999999999999999   999999999999999999999


Q ss_pred             eeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          491 RLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       491 kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                      ||+|..              ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .+...  
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~----~~~~~--  256 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME----EVMHK--  256 (496)
T ss_pred             EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHH--
Confidence            998732              1235899999999999999999999999999999999999999753211    11110  


Q ss_pred             hhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       557 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                                .. .......+......+.+++..||+.+|.+||++.++++.
T Consensus       257 ----------~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        257 ----------TL-AGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             ----------Hh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence                      00 001112333455678899999999999999999999763

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-35  Score=303.36  Aligned_cols=243  Identities=26%  Similarity=0.406  Sum_probs=194.5

Q ss_pred             CCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe-----
Q 041096          350 FHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE-----  418 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----  418 (645)
                      |...+.||+|+||.||+|....+   +..+|+|+++..   ......+.+|++.++.++|+||+++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678899999999999998653   378999988753   2334678999999999999999999999876554     


Q ss_pred             -EEEEEecCCCCCHhHHhhhcCC--CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          419 -LLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       419 -~~lV~Ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                       .++++||+++|+|..++.....  ....+++.....++.|++.||+|||+   .+++||||||+||++++++.+|+.|.
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence             7999999999999999865432  22358999999999999999999998   99999999999999999999999872


Q ss_pred             cc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhc
Q 041096          496 FT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       496 ~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      ..              ...++..|+|||.+....++.++|||||||++|||++ |..||......    .+.++..    
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~----~~~~~~~----  229 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH----EIYDYLR----  229 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH----
Confidence            21              1124568999999988889999999999999999999 88888653321    1112111    


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                               .......+......+.+++..||+.||++||++.++++.|+++
T Consensus       230 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         230 ---------HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             ---------cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                     1111123334566789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.4e-36  Score=306.01  Aligned_cols=245  Identities=24%  Similarity=0.371  Sum_probs=198.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCC-----CeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASS-----GSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|...+.||+|+||.||+|.....     +..+|+|......  .....+.+|+.++..++|+||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            35678889999999999999988643     3789999986532  3356789999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCC------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          420 LLVYEYMPNGSLDRMLYQDSEN------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                      ++||||+++|+|.+++......      ...++|..++.++.|++.||.|||+   .+++||||||+|||++.++..++.
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence            9999999999999999754321      2247899999999999999999998   999999999999999999999997


Q ss_pred             ccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhh
Q 041096          494 SSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       494 d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      |..              ....++..|+|||.+..+.++.++|||||||++||+++ |+.||......    .+.+..   
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~~---  234 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE----EVLKFV---  234 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH----HHHHHH---
Confidence            732              11235678999999988889999999999999999998 89998653321    111111   


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                ........+......+.+++..||+.+|++|||+.++++.|+.
T Consensus       235 ----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         235 ----------IDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             ----------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence                      1111112233346788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=4.5e-36  Score=323.66  Aligned_cols=239  Identities=23%  Similarity=0.327  Sum_probs=190.3

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .|...+.||+|+||+||+|....++..+|+|++...    ....+.+.+|++++.+++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            577889999999999999999999999999998652    2335678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |+++|+|.+++.+..    .+++.....++.|++.||+|||+   .+|+||||||+||||+.++.+++.|...       
T Consensus        82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            999999999997644    38888999999999999999999   9999999999999999999999987321       


Q ss_pred             ----------------------------------------------------ccccCCcccCcccccCCCCCcchhHHHH
Q 041096          498 ----------------------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSY  525 (645)
Q Consensus       498 ----------------------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~Sf  525 (645)
                                                                          ..+||..|+|||.+.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence                                                                1368999999999999899999999999


Q ss_pred             HHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHH--HccCCCCCCCCCHH
Q 041096          526 GVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGL--SCANPDSSARPSMR  603 (645)
Q Consensus       526 Gvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~--~Cl~~dP~~RPt~~  603 (645)
                      ||++|||++|+.||...........+..|..      . ...  + ....++.+    +.+++.  .|+..++..||+++
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~------~-~~~--~-~~~~~s~~----~~dli~~ll~~~~~~~~R~~~~  300 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWEN------T-LHI--P-PQVKLSPE----AVDLITKLCCSAEERLGRNGAD  300 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHcccc------c-cCC--C-CCCCCCHH----HHHHHHHHccCcccccCCCCHH
Confidence            9999999999999976432221111111100      0 000  0 00112333    333443  37777888899999


Q ss_pred             HHHHH
Q 041096          604 RVFQI  608 (645)
Q Consensus       604 ~vl~~  608 (645)
                      ++++.
T Consensus       301 ~~l~h  305 (381)
T cd05626         301 DIKAH  305 (381)
T ss_pred             HHhcC
Confidence            99873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.7e-35  Score=301.54  Aligned_cols=240  Identities=26%  Similarity=0.431  Sum_probs=195.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|.... +..+|+|.+.......+.+.+|+.++++++|+|++++++++.+ +..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence            467788999999999999998764 5678999887755566789999999999999999999998854 56899999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +++|.+++....  ...+++.+++.++.|++.||+|||+   .+++||||||+||+++.++..++.|...          
T Consensus        84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          84 KGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            999999997543  2248999999999999999999999   9999999999999999999999877211          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++..|+|||.+....++.++||||||+++|||++ |+.||......    ...+             .+.....
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~~~~-------------~~~~~~~  221 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR----EVLE-------------QVERGYR  221 (260)
T ss_pred             cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH----HHHH-------------HHHcCCC
Confidence               1123457999999988899999999999999999999 88898653221    1111             1111112


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+......+.+++.+|++++|++|||++++.+.|++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            22334456678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.8e-35  Score=301.22  Aligned_cols=233  Identities=21%  Similarity=0.370  Sum_probs=189.4

Q ss_pred             eccCCceEEEEEEEC--CCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFA--SSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~--~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||.||+|.+.  +.+..+|+|.+....  ...+.+.+|+.++++++|+||++++++|.. +..++||||+++++|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence            899999999999875  445679999887632  335679999999999999999999998864 578999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc-------------
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------  498 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~-------------  498 (645)
                      .+++.....   .+++.++++++.|++.||+|||+   .+++||||||+||+++.++.+|+.|....             
T Consensus        82 ~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  155 (257)
T cd05115          82 NKFLSGKKD---EITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR  155 (257)
T ss_pred             HHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence            999975432   38999999999999999999998   89999999999999999999999772111             


Q ss_pred             --cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          499 --TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       499 --~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                        ..++..|+|||.+..+.++.++|||||||++||+++ |+.||.......    .             ...+.......
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~-------------~~~~~~~~~~~  218 (257)
T cd05115         156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE----V-------------MSFIEQGKRLD  218 (257)
T ss_pred             CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH----H-------------HHHHHCCCCCC
Confidence              112467999999998889999999999999999996 999997643211    1             11112222223


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .+..+...+.+++..||..+|++||++.+|.+.|+..
T Consensus       219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            4445567888999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=7e-36  Score=309.39  Aligned_cols=253  Identities=23%  Similarity=0.306  Sum_probs=189.0

Q ss_pred             cCCCcCceeccCCceEEEEEEEC-CCCeEEEEEeccCCc---chhHhHHHHHHHHhhc---CCCCeeeeeeeeee-----
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA-SSGSVAAVKRSKHSH---EGKTEFLAELSIIACL---RHKNLVQLLGWCAE-----  415 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~-----  415 (645)
                      ++|+..+.||+|+||.||+|... .++..+|+|++....   .....+.+|+.+++.+   +||||++++++|..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888899999999999999984 456889999876522   2234567788777766   69999999999852     


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ....++||||++ ++|.+++.....  ..+++.++..++.|++.||+|||+   .+++||||||+|||++.++.+|+.|.
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence            346899999995 699999875432  238999999999999999999999   99999999999999999999999873


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .           ....||..|+|||.+....++.++|||||||++|||++|+.||......+....+.+... .......
T Consensus       155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~-~~~~~~~  233 (290)
T cd07862         155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEEDW  233 (290)
T ss_pred             cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC-CCChhhc
Confidence            2           223578999999999988999999999999999999999999986543322222222110 0000000


Q ss_pred             hHH---hhhhcc--C-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEA---ADKRLN--G-----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~---~d~~l~--~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+.   ....+.  .     ....+....+.+++.+|++.+|++|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            000   000000  0     001123355678999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-35  Score=303.91  Aligned_cols=240  Identities=30%  Similarity=0.451  Sum_probs=192.5

Q ss_pred             ceeccCCceEEEEEEECCCCe--EEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGS--VAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~--~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|.+..++.  .+++|.....  ....+.+.+|++++.++ +||||++++++|...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999977664  4688887652  34456789999999999 799999999999999999999999999


Q ss_pred             CCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          429 GSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       429 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      |+|.+++.....            ....+++.++..++.|++.||+|||+   .+++||||||+||++++++.+|++|..
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence            999999975431            12348899999999999999999998   999999999999999999999998732


Q ss_pred             cc-----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 TL-----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ~~-----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      ..           ...+..|+|||++....++.++|||||||++|||++ |+.||......    ....           
T Consensus       158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~-----------  222 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYE-----------  222 (270)
T ss_pred             CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH----HHHH-----------
Confidence            11           123457999999998899999999999999999997 99999653221    1111           


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                        .+........+......+.+++..||+.+|.+|||+.++++.|+.+.
T Consensus       223 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         223 --KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             --HHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence              11111111222234456889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=300.23  Aligned_cols=240  Identities=28%  Similarity=0.445  Sum_probs=199.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|...  +..+|+|.+.......+.+.+|+.++++++|+||+++++++...+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            46778899999999999999876  7889999988765567789999999999999999999999999899999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------cc
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------TL  498 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------~~  498 (645)
                      +++|.+++.....  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++..++.|..         ..
T Consensus        84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~  158 (256)
T cd05039          84 KGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS  158 (256)
T ss_pred             CCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccccc
Confidence            9999999976542  248999999999999999999999   999999999999999999999998732         11


Q ss_pred             cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       499 ~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ..++..|+|||.+..+.++.++||||||+++||+++ |+.||......    .+...             +........+
T Consensus       159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~-------------~~~~~~~~~~  221 (256)
T cd05039         159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPH-------------VEKGYRMEAP  221 (256)
T ss_pred             CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH-------------HhcCCCCCCc
Confidence            234567999999998899999999999999999997 99998654221    11111             1111111223


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+..+.+++.+||..+|++||++++++++|+.
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            3345778899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.8e-35  Score=302.02  Aligned_cols=240  Identities=25%  Similarity=0.425  Sum_probs=195.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|...++||+|+||.||+|.+..+ ..+|+|++.......+.+.+|++++++++|+||+++++.+.+ +..++||||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence            4688889999999999999988754 469999988755556789999999999999999999998754 56899999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +|+|.+++....  ...+++..+..++.|+++||+|||+   .+++||||||+||+++.++.+++.|...          
T Consensus        84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          84 KGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence            999999997542  2347999999999999999999999   9999999999999999999999977321          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++..|+|||+..+..++.++||||||+++|||++ |+.||......    ....             .......
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----~~~~-------------~~~~~~~  221 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLD-------------QVERGYR  221 (262)
T ss_pred             cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH----HHHH-------------HHhcCCC
Confidence               1234567999999998899999999999999999999 88888654321    1111             0111111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+.+.+..+.+++..|++.+|++||++.++++.|+.
T Consensus       222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            12234556778999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.3e-36  Score=323.30  Aligned_cols=188  Identities=28%  Similarity=0.375  Sum_probs=168.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .|+..++||+|+||.||+|....++..+|+|++...    ......+.+|++++++++|+||+++++.+.+.+..|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            578889999999999999999989999999988653    2334578899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |+++|+|.+++.+..    .++......++.||+.||+|||+   .+|+||||||+||||+.++.+|+.|..-       
T Consensus        82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625          82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence            999999999997643    37888889999999999999999   9999999999999999999999987321       


Q ss_pred             ----------------------------------------------------ccccCCcccCcccccCCCCCcchhHHHH
Q 041096          498 ----------------------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSY  525 (645)
Q Consensus       498 ----------------------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~Sf  525 (645)
                                                                          ..+||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (382)
T cd05625         155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV  234 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence                                                                1258999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCccc
Q 041096          526 GVVVLEVACGRRPIERET  543 (645)
Q Consensus       526 Gvvl~El~tG~~P~~~~~  543 (645)
                      ||++|||++|+.||....
T Consensus       235 Gvil~elltG~~Pf~~~~  252 (382)
T cd05625         235 GVILYEMLVGQPPFLAQT  252 (382)
T ss_pred             hHHHHHHHhCCCCCCCCC
Confidence            999999999999997643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=322.46  Aligned_cols=239  Identities=27%  Similarity=0.346  Sum_probs=196.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||+|....++..||+|++...    ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4688899999999999999999988999999998752    244567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++....    .+++..+..++.|++.||+|||+   .+|+||||||+||||+.++.+++.|..       
T Consensus        81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            9999999999997653    38999999999999999999999   999999999999999999999997721       


Q ss_pred             ----------------------------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          497 ----------------------------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       497 ----------------------------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                                                        ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence                                              1235899999999999999999999999999999999999999764


Q ss_pred             ccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 041096          543 TEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-MRRVFQI  608 (645)
Q Consensus       543 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~~vl~~  608 (645)
                      ........+..|.              ..+...........+.+++..|++ +|.+||+ ++++++.
T Consensus       234 ~~~~~~~~i~~~~--------------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         234 TLQETYNKIINWK--------------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CHHHHHHHHhccC--------------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            4211111111100              111111111135567788889997 9999999 9999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.5e-35  Score=301.45  Aligned_cols=232  Identities=24%  Similarity=0.366  Sum_probs=188.5

Q ss_pred             eeccCCceEEEEEEE--CCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          355 ILGRGAFGNVYKAYF--ASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~--~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      .||+|+||.||+|.+  ..++..+|+|+++...   ...+++.+|+.++++++|+||+++++++.. +..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            589999999999975  3457889999886532   235678999999999999999999999864 5679999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------------
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------------  497 (645)
                      +|.+++....    .+++..+..++.|++.||+|||+   ++++||||||+||+++.++.++++|...            
T Consensus        81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~  153 (257)
T cd05116          81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK  153 (257)
T ss_pred             cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence            9999997543    38999999999999999999998   9999999999999999999999987211            


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++..|+|||.+....++.++|||||||++|||++ |+.||......    .+.             +.+.....
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~-------------~~i~~~~~  216 (257)
T cd05116         154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN----EVT-------------QMIESGER  216 (257)
T ss_pred             ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH-------------HHHHCCCC
Confidence               1123468999999988889999999999999999998 99999754321    111             11122222


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+......+.+++..||+.+|++||++.+|.+.|++
T Consensus       217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            23334455678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-37  Score=314.62  Aligned_cols=239  Identities=26%  Similarity=0.408  Sum_probs=202.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .|...++||+|.||.||||.+..+++.||+|++..  .....++..+|+.++.+++|+||.+++|.+..+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            45666889999999999999999999999999876  4455678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------  494 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------------  494 (645)
                      .+|++.+.|+....    +......-|+.++..||.|||+   ++.+|||||+.||||..++.+|+.|            
T Consensus        94 ~gGsv~~lL~~~~~----~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNI----LDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             cCcchhhhhccCCC----CccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            99999999976543    5777777899999999999999   9999999999999999999999987            


Q ss_pred             cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       495 ~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      .....+||+.|||||++....|+.|+||||+|++++||++|.+|+...........             +.+..-|.|.+
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------------Ipk~~PP~L~~  233 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------------IPKSAPPRLDG  233 (467)
T ss_pred             ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------------ccCCCCCcccc
Confidence            22446899999999999988999999999999999999999999987654222111             11112233333


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                          +....+.+++..|++.+|+.||++.++++  +|+.
T Consensus       234 ----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  234 ----DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ----ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence                45567888889999999999999999986  4554

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1e-35  Score=310.79  Aligned_cols=249  Identities=29%  Similarity=0.441  Sum_probs=198.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe--EEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS--VAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~--~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.+..++.  .+++|.+..  .......+.+|++++.++ +|+||+++++++..++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            567888999999999999999876664  457777654  233456788999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          423 YEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      |||+++++|.+++.....            ....+++.+++.++.|++.||+|||+   .+++||||||+|||++.++..
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence            999999999999975431            12358999999999999999999998   999999999999999999999


Q ss_pred             eeeccccc-----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhh
Q 041096          491 RLESSFTL-----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       491 kl~d~~~~-----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      ++.|....           ..++..|+|||++....++.++|||||||++|||++ |..||......+    ..+     
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~-----  234 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----LYE-----  234 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH----HHH-----
Confidence            99873211           123567999999988889999999999999999998 999986543211    111     


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                              .+........+......+.+++.+||+.+|++||+++++++.|+...+..
T Consensus       235 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         235 --------KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             --------HHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                    11111111122233456788999999999999999999999988654444

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-35  Score=299.95  Aligned_cols=235  Identities=28%  Similarity=0.434  Sum_probs=191.2

Q ss_pred             ceeccCCceEEEEEEECCCC---eEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|.....+   ..+|+|.+.....  ..+++.+|+++++.+.|+||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            46999999999999875544   7899999876443  5668999999999999999999999876 4568999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----------  498 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----------  498 (645)
                      ++|.+++....    .+++..++.++.|++.||+|||+   .+++||||||+|||++.++..++.|....          
T Consensus        80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence            99999997654    38999999999999999999998   89999999999999999999999772110          


Q ss_pred             -----cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          499 -----TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       499 -----~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                           ..++..|+|||.+....++.++||||||+++|||++ |+.||......    .+..+....             .
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~----~~~~~~~~~-------------~  215 (257)
T cd05060         153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA----EVIAMLESG-------------E  215 (257)
T ss_pred             ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHHcC-------------C
Confidence                 112357999999998999999999999999999998 99998754321    122221111             0


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ....+...+..+.+++.+||+.+|.+||++.++++.|++..
T Consensus       216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            11223334567889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2e-35  Score=300.97  Aligned_cols=241  Identities=24%  Similarity=0.446  Sum_probs=197.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..++||+|+||.||+|...+ +..+|+|.+.........+.+|+.++++++|+||+++++++. .+..+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence            3567888999999999999998764 678999998876666778999999999999999999999874 45789999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++....  +..+++.+++.++.|++.||+|||+   .+++||||||+||+++.++..++.|...         
T Consensus        83 ~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05067          83 ENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY  157 (260)
T ss_pred             CCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence            9999999986543  2348999999999999999999998   9999999999999999999999977211         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...++..|+|||++....++.++||||||++++||++ |+.||.......    +..             .+....
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~-------------~~~~~~  220 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE----VIQ-------------NLERGY  220 (260)
T ss_pred             ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH----HHH-------------HHHcCC
Confidence                1234567999999998889999999999999999999 999997543211    111             111111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ....+...+..+.+++.+|++.+|++||+++++++.|+.
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         221 RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            112233345678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.2e-35  Score=318.42  Aligned_cols=189  Identities=29%  Similarity=0.396  Sum_probs=169.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||++....++..+|+|++...    ......+.+|+.++.+++|+||+++++.+.+....||||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4688899999999999999999988999999998652    223456788999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++|+|.+++.+..    .+++.+...++.|++.||+|||+   .+|+||||||+|||++.++.+||.|...      
T Consensus        81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            9999999999997643    38999999999999999999999   9999999999999999999999987321      


Q ss_pred             -----------------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC
Q 041096          498 -----------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR  536 (645)
Q Consensus       498 -----------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~  536 (645)
                                                               ..+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~  233 (363)
T cd05628         154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (363)
T ss_pred             cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence                                                     236899999999999999999999999999999999999


Q ss_pred             CCCCccc
Q 041096          537 RPIERET  543 (645)
Q Consensus       537 ~P~~~~~  543 (645)
                      .||....
T Consensus       234 ~Pf~~~~  240 (363)
T cd05628         234 PPFCSET  240 (363)
T ss_pred             CCCCCCC
Confidence            9997643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.1e-35  Score=304.71  Aligned_cols=242  Identities=25%  Similarity=0.351  Sum_probs=194.9

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC------C
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK------G  417 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~------~  417 (645)
                      .+++.|+..+.||+|+||.||+|....++..+|+|++.........+..|+.++.++ +|+||+++++++...      .
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            466788889999999999999999998899999999877666667889999999998 699999999998753      4


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT  497 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~  497 (645)
                      ..++||||+++++|.+++.....  ..+++..+..++.|++.||+|||+   ++++||||||+||+++.++..++.|...
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence            68999999999999999976432  348999999999999999999999   9999999999999999999999987321


Q ss_pred             ------------ccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          498 ------------LTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       498 ------------~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                                  ...|+..|+|||++.     ...++.++|||||||++|||++|+.||.........    ..   ...
T Consensus       158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~----~~---~~~  230 (272)
T cd06637         158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL----FL---IPR  230 (272)
T ss_pred             ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH----HH---Hhc
Confidence                        235788999999986     345788999999999999999999999653221100    00   000


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                               ..............+.+++.+||+.+|.+|||+.++++
T Consensus       231 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         231 ---------NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             ---------CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence                     00011111223456788999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=8.5e-36  Score=286.17  Aligned_cols=252  Identities=20%  Similarity=0.292  Sum_probs=200.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .+|...++||+|.||.||+|++..+|+.||||+++..+.   -.....+||+.|+.++|+||+.+++++...+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            356677889999999999999999999999999887432   25678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      ||+ .+|...++....   .+...+...++.++++|++|||+   +.|+||||||.|+|+++++..|+.|.         
T Consensus        82 fm~-tdLe~vIkd~~i---~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   82 FMP-TDLEVVIKDKNI---ILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             ecc-ccHHHHhccccc---ccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            995 589999976544   48999999999999999999999   99999999999999999999999882         


Q ss_pred             ---ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC---------
Q 041096          496 ---FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG---------  562 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~---------  562 (645)
                         .+..+-|.+|+|||.+.+ +.|+...||||.||++.||+-|.+-|.+.++-+.    +..+.+.+...         
T Consensus       155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ----L~~If~~LGTP~~~~WP~~~  230 (318)
T KOG0659|consen  155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ----LSKIFRALGTPTPDQWPEMT  230 (318)
T ss_pred             CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH----HHHHHHHcCCCCcccCcccc
Confidence               122367889999999876 5699999999999999999998877766543222    22222221111         


Q ss_pred             chhH------HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          563 RIIE------AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       563 ~~~~------~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      .+.+      .-.+.+.. .-..+....++++..++..||.+|+|+.|+++  .+..
T Consensus       231 ~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  231 SLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             ccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence            0111      11111221 23344556699999999999999999999987  4554

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.9e-35  Score=308.53  Aligned_cols=244  Identities=25%  Similarity=0.401  Sum_probs=197.2

Q ss_pred             cCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccCCc--chhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~  419 (645)
                      ++|...+.||+|+||.||++..     ...+..+|+|+++...  ...+.+.+|+++++++ +|+||++++++|...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            5688899999999999999975     2345689999887632  3345789999999999 799999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--  497 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--  497 (645)
                      ++||||+++|+|.+++.....  ..+++.++..++.|++.||+|||+   ++++|+||||+|||++.+..++++|...  
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            999999999999999975432  238999999999999999999999   9999999999999999999999877211  


Q ss_pred             ------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          498 ------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       498 ------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ...++..|+|||.+....++.++|||||||++|||++ |..||........   +.            
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~---~~------------  254 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK---FY------------  254 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH---HH------------
Confidence                        1234567999999999999999999999999999998 9999875432111   11            


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       +.++.......+......+.+++..|++++|++||++.++++.|++.
T Consensus       255 -~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         255 -KLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -HHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence             11111111112223346788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.4e-35  Score=307.98  Aligned_cols=252  Identities=24%  Similarity=0.411  Sum_probs=198.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCC----------------eEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSG----------------SVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQ  408 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~----------------~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~  408 (645)
                      .++|+..+.||+|+||.||++.....+                ..+|+|.+...  ....+++.+|++++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            357888999999999999999876433                56899988763  334678999999999999999999


Q ss_pred             eeeeeeeCCeEEEEEecCCCCCHhHHhhhcCC-------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSE-------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       409 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      ++++|..++..++++||+++++|.+++.....       ....+++..++.++.|++.||+|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence            99999999999999999999999999976541       11248999999999999999999998   999999999999


Q ss_pred             EEEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCccccc
Q 041096          482 IMLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC--GRRPIERETEG  545 (645)
Q Consensus       482 Illd~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t--G~~P~~~~~~~  545 (645)
                      |+++.++.+++.|...              ...++..|+|||.+....++.++|||||||++|||++  +..||......
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence            9999999999977321              1234668999999998899999999999999999998  67787653321


Q ss_pred             cchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       546 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                          .........+....      .......+...+..+.+++..||+.+|++|||+.+|++.|+.
T Consensus       241 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         241 ----QVIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             ----HHHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence                12222211111111      011111222344678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=8.9e-36  Score=322.24  Aligned_cols=248  Identities=23%  Similarity=0.368  Sum_probs=198.2

Q ss_pred             HhcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKG  417 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~  417 (645)
                      ..++|...++||+|+||.||+|++.     ..+..||+|++...  ....+.+.+|++++.++. ||||++++|+|...+
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~  114 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG  114 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence            3456777899999999999999864     24568999998763  223457899999999997 999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC---------------------------------------------------------
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE---------------------------------------------------------  440 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~---------------------------------------------------------  440 (645)
                      ..++||||+++|+|.++++....                                                         
T Consensus       115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (401)
T cd05107         115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD  194 (401)
T ss_pred             CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence            99999999999999999975421                                                         


Q ss_pred             -------------------------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          441 -------------------------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       441 -------------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                                                           ....++|.+.+.++.|++.||+|||+   .+++||||||+|||
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiL  271 (401)
T cd05107         195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVL  271 (401)
T ss_pred             chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEE
Confidence                                                 11247888999999999999999998   99999999999999


Q ss_pred             EcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccch
Q 041096          484 LDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKM  548 (645)
Q Consensus       484 ld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~  548 (645)
                      ++.++.+++.|...              ...++..|+|||.+....++.++|||||||++|||++ |+.||......+. 
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-  350 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-  350 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-
Confidence            99999999977221              1235678999999998889999999999999999998 8889865332111 


Q ss_pred             hhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          549 VNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       549 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                        +             .+.+....+...+......+.+++..||+.+|.+||++++|++.|+..
T Consensus       351 --~-------------~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         351 --F-------------YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             --H-------------HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              1             111111111222333456788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-35  Score=308.35  Aligned_cols=251  Identities=22%  Similarity=0.386  Sum_probs=194.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC--------------CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS--------------GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLG  411 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~--------------~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g  411 (645)
                      ++|+..+.||+|+||.||++.....              ...||+|.+...  ......|.+|++++++++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            5788889999999999999987532              235899988653  333557999999999999999999999


Q ss_pred             eeeeCCeEEEEEecCCCCCHhHHhhhcCC--------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          412 WCAEKGELLLVYEYMPNGSLDRMLYQDSE--------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       412 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                      ++...+..++||||+++++|.+++.....        ....++|..++.++.|++.||+|||+   .+++||||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence            99999999999999999999999965321        11237899999999999999999999   99999999999999


Q ss_pred             EcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCccccccc
Q 041096          484 LDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC--GRRPIERETEGHK  547 (645)
Q Consensus       484 ld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t--G~~P~~~~~~~~~  547 (645)
                      ++.++.+|+.|...              ...++..|+|||++..+.++.++|||||||+++||++  |..||....... 
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~-  240 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-  240 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence            99999999977211              1123568999999998899999999999999999998  566776543211 


Q ss_pred             hhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          548 MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       548 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                         ........+...      ........+...+..+.+++.+||+.+|++||+|.+|++.|+.
T Consensus       241 ---~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         241 ---VIENTGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             ---HHHHHHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence               111111111100      0011111122345689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.3e-35  Score=306.32  Aligned_cols=242  Identities=24%  Similarity=0.385  Sum_probs=195.2

Q ss_pred             CCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      |+..+.||+|+||.||+|....     .+..+|+|++.....  ..+.+.+|+.++.+++||||+++++++...+..+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            5556789999999999998753     257899999876332  346688999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcC------------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          423 YEYMPNGSLDRMLYQDS------------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +||+++++|.+++....            .....+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCce
Confidence            99999999999985321            112348899999999999999999998   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      |+.|...              ...+++.|+|||.+..+.++.++|||||||++|||++ |..||......    .+.+  
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~--  237 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----DVIE--  237 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH--
Confidence            9987321              1234678999999998889999999999999999998 88888653221    1111  


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                 .+...-....+.+.+..+.+++..||+.+|.+||++++|++.|+.
T Consensus       238 -----------~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         238 -----------MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -----------HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                       111111122344566778999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.2e-35  Score=304.44  Aligned_cols=244  Identities=24%  Similarity=0.414  Sum_probs=196.4

Q ss_pred             cCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..++||+|+||.||++...     ..+..+++|.+... ......+.+|+++++.++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45677889999999999999753     24568899987763 3445689999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCC-----------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          422 VYEYMPNGSLDRMLYQDSEN-----------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +|||+++++|.+++......           ...+++..++.++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            99999999999999764321           1348999999999999999999998   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      ++.|...              ...++..|+|||.+.+..++.++|||||||++|||++ |+.||.......    ...  
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~~--  235 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE----AIE--  235 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH----HHH--
Confidence            9977321              1223578999999999999999999999999999998 899986543211    111  


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                 ..........+...+..+.+++..||+.+|.+||++++|++.|+.
T Consensus       236 -----------~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         236 -----------CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             -----------HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence                       111111112223345668899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=3e-35  Score=301.06  Aligned_cols=246  Identities=24%  Similarity=0.357  Sum_probs=196.3

Q ss_pred             HHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       343 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++.+++++.....||+|+||.||+|....++..+++|.+... ....+.+.+|+.++++++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            445677787888999999999999999888899999987663 3456689999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~----  496 (645)
                      |+||+++++|.+++...... ...++..+..++.|++.||+|||+   .+|+||||||+||+++. ++..++.|..    
T Consensus        83 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence            99999999999999764321 012788899999999999999998   99999999999999986 5678887621    


Q ss_pred             --------cccccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 --------TLTAGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~--~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                              ....|+..|+|||++....  ++.++||||||+++|||++|+.||........    ..+.           
T Consensus       159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~----~~~~-----------  223 (268)
T cd06624         159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA----AMFK-----------  223 (268)
T ss_pred             cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh----hHhh-----------
Confidence                    1234788999999987643  78999999999999999999999865322110    0000           


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..........+......+.+++.+||+.+|.+|||+.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         224 VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            00001112234445567888999999999999999999985

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-36  Score=322.32  Aligned_cols=238  Identities=24%  Similarity=0.332  Sum_probs=192.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..++||+|+||.||+|....++..||||++...    ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4688899999999999999999988999999998652    233456788999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++|+|.+++....    .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+++.|...      
T Consensus        81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            9999999999997643    38999999999999999999999   9999999999999999999999977321      


Q ss_pred             --------------------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHH
Q 041096          498 --------------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVA  533 (645)
Q Consensus       498 --------------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~  533 (645)
                                                                  ..+||+.|+|||++....++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence                                                        125899999999999999999999999999999999


Q ss_pred             cCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 041096          534 CGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS---MRRVFQ  607 (645)
Q Consensus       534 tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~~vl~  607 (645)
                      +|+.||...........+..|              ...+...........+.+++..|+. +|.+|++   ++++++
T Consensus       234 ~G~~Pf~~~~~~~~~~~i~~~--------------~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         234 VGYPPFCSDNPQETYRKIINW--------------KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             cCCCCCCCCCHHHHHHHHHcC--------------CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            999999764322111111111              0001000001123445666777886 8999998   888876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.5e-35  Score=305.97  Aligned_cols=254  Identities=25%  Similarity=0.354  Sum_probs=194.3

Q ss_pred             cCCCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~  420 (645)
                      ++|+..+.||+|+||.||++..    ..++..||+|.+... ....+.+.+|++++++++|+||+++++++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4677789999999999999985    345789999998764 3345678999999999999999999998754  34689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccccc-
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-  499 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~-  499 (645)
                      +||||+++++|.+++.....   .++|..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..... 
T Consensus        84 lv~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRE---RLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCc---CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccc
Confidence            99999999999999975432   38999999999999999999998   999999999999999999999998722111 


Q ss_pred             --------------ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc----c
Q 041096          500 --------------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA----E  561 (645)
Q Consensus       500 --------------~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~----~  561 (645)
                                    .++..|+|||.+.+..++.++|||||||++|||++|..|+......     ..........    .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  232 (284)
T cd05081         158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-----FMRMMGNDKQGQMIV  232 (284)
T ss_pred             ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-----hhhhcccccccccch
Confidence                          1233599999999888999999999999999999988775432110     0000000000    0


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ..+.+.+........+...+..+.+++.+||..+|++||||++|++.|+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            011112222111122334456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.1e-35  Score=302.16  Aligned_cols=242  Identities=26%  Similarity=0.440  Sum_probs=195.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .+|+..+.||+|+||.||+|....+   +..+|+|.+...  ....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4677889999999999999987533   347899988653  23456899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----  498 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----  498 (645)
                      |||+++++|.+++.....   .+++.+++.++.|++.||+|||+   ++++||||||+|||++.++.+++.|....    
T Consensus        84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          84 TEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             EEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            999999999999976432   38999999999999999999998   99999999999999999999999773110    


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ..++..|+|||++.++.++.++||||||+++||+++ |+.||......+    ......          
T Consensus       158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----~~~~~~----------  223 (267)
T cd05066         158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----VIKAIE----------  223 (267)
T ss_pred             cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----HHHHHh----------
Confidence                       112457999999998899999999999999999886 999987543211    111110          


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                         .......+...+..+.+++..|++.+|.+||+|.++++.|+..
T Consensus       224 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         224 ---EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ---CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence               0111112223456778999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2e-35  Score=302.60  Aligned_cols=241  Identities=26%  Similarity=0.461  Sum_probs=196.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCe---EEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGS---VAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~---~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .|+..+.||+|+||.||+|....++.   .||+|.+...  .....+|..|+.++++++||||+++++++.+++..++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46778899999999999999876553   6999998763  334568999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc-----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-----  498 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~-----  498 (645)
                      ||+++++|.+++.....   .+++.+++.++.|++.||.|||+   .+++||||||+||+++.++..++.|....     
T Consensus        85 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          85 EFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             ecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            99999999999976433   38999999999999999999998   99999999999999999999998772110     


Q ss_pred             ---------cc---cCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          499 ---------TA---GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       499 ---------~~---gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                               ..   .+..|+|||.+....++.++|||||||++||+++ |..||......    ....++.         
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~----~~~~~i~---------  225 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ----DVINAIE---------  225 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH----HHHHHHH---------
Confidence                     01   1346999999999999999999999999999886 99999754321    1222111         


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                          .......+.+.+..+.+++..||+.+|.+||+++++++.|+..
T Consensus       226 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         226 ----QDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             ----cCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                1111122234456788999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.7e-35  Score=296.91  Aligned_cols=233  Identities=26%  Similarity=0.439  Sum_probs=191.0

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ++||+|+||.||+|... ++..+|+|.+....  .....+.+|++++++++|+||++++++|...+..++||||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            36999999999999876 47889999877632  3345789999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------------c
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------L  498 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------------~  498 (645)
                      .+++.....   .+++..++.++.|++.+|.|||+   ++++||||||+||+++.++.+++.|...             .
T Consensus        80 ~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (250)
T cd05085          80 LSFLRKKKD---ELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL  153 (250)
T ss_pred             HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence            999865432   38999999999999999999998   9999999999999999999999987321             1


Q ss_pred             cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       499 ~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ..++..|+|||++.++.++.++||||||+++||+++ |..||.......    ...             .+........+
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~----~~~-------------~~~~~~~~~~~  216 (250)
T cd05085         154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ----ARE-------------QVEKGYRMSCP  216 (250)
T ss_pred             CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH----HHH-------------HHHcCCCCCCC
Confidence            123567999999999999999999999999999998 999997543211    111             11111111223


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ...+..+.+++..|++.+|++||++.++++.|.
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            345678899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2e-35  Score=304.45  Aligned_cols=247  Identities=23%  Similarity=0.352  Sum_probs=199.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~  419 (645)
                      .++|...++||+|+||.||+|....    .+..|++|++...  ......+.+|+.++++++|+||+++++++.. ....
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4678888999999999999999875    3578899987653  3345678999999999999999999999876 4678


Q ss_pred             EEEEecCCCCCHhHHhhhcCCC----CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          420 LLVYEYMPNGSLDRMLYQDSEN----GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ++++||+++++|.+++......    ...+++.+++.++.|++.||+|||+   .+++||||||+||+++.++..|+.|.
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999999764322    1458999999999999999999998   99999999999999999999999762


Q ss_pred             cc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhc
Q 041096          496 FT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       496 ~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      ..              ...++..|+|||++....++.++||||||+++||+++ |+.||......    .+..+..    
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~----  233 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF----EMAAYLK----  233 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH----HHHHHHH----
Confidence            21              1234667999999998889999999999999999999 99999754321    1111111    


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                               ...........+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus       234 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         234 ---------DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             ---------cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                     11111122234567889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.3e-35  Score=305.40  Aligned_cols=245  Identities=27%  Similarity=0.443  Sum_probs=197.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|+..+.||+|+||.||++....     ++..+|+|.+...  .....++.+|+.++++++||||++++++|.+++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4678889999999999999998742     5678999988763  23456799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCC------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          420 LLVYEYMPNGSLDRMLYQDSE------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      ++||||+++|+|.+++.....                  ....+++.+++.++.|++.||+|||+   .+++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence            999999999999999975321                  11247899999999999999999998   999999999999


Q ss_pred             EEEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccccc
Q 041096          482 IMLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGH  546 (645)
Q Consensus       482 Illd~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~  546 (645)
                      |+++.++..++.|...              ....+..|+|||.+.+..++.++|||||||++|||++ |..||...... 
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            9999999999977321              1123456999999998899999999999999999998 88888653321 


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                         .....    ...+.        . ...+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus       240 ---~~~~~----~~~~~--------~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         240 ---EVIYY----VRDGN--------V-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ---HHHHH----HhcCC--------C-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence               11111    11111        1 11233445678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-36  Score=286.71  Aligned_cols=238  Identities=26%  Similarity=0.365  Sum_probs=203.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..+.||+|.||.||.|..+.++..||+|++.++    .+-.+++.+|+++-+.|+||||+++++|+.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            35788999999999999999999999999999998763    23456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-------  495 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-------  495 (645)
                      +||.++|.|...|.....  ..++......++.|+|.||.|+|.   ++++||||||+|+|++.++..|+.|.       
T Consensus       101 lEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            999999999999985432  237777888899999999999998   99999999999999999999999873       


Q ss_pred             ---ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          496 ---FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....+||.-|++||-..+..++...|+|++|++.+|++.|..||+.....+....+.              .+    
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~--------------k~----  237 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR--------------KV----  237 (281)
T ss_pred             CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH--------------Hc----
Confidence               234589999999999999999999999999999999999999998765332222111              11    


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .-.++........+++..|+..+|.+|.+..|+++
T Consensus       238 ~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  238 DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            12334555667788889999999999999999986

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.5e-35  Score=300.95  Aligned_cols=242  Identities=26%  Similarity=0.397  Sum_probs=191.4

Q ss_pred             CcCceeccCCceEEEEEEECCCCe--EEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------CeE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGS--VAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------GEL  419 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~--~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~  419 (645)
                      ...++||+|+||.||+|.....+.  .+|+|.++..   ....+.+.+|+++++.++|+||++++++|...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456889999999999999876654  6899987653   33456789999999999999999999987532      246


Q ss_pred             EEEEecCCCCCHhHHhhhcC--CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc
Q 041096          420 LLVYEYMPNGSLDRMLYQDS--ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT  497 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~  497 (645)
                      ++++||+++|+|.+++....  .....+++.....++.|++.||+|||+   ++|+||||||+|||++.++..++.|...
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence            89999999999999885432  123458999999999999999999999   9999999999999999999999988321


Q ss_pred             --------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccC
Q 041096          498 --------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       498 --------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                    ...++..|+|||++....++.++||||||+++|||++ |+.||......    .+.+.    ...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~----~~~~  230 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS----EIYDY----LRQG  230 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----HHcC
Confidence                          1134567999999999999999999999999999999 78888653221    11111    1111


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .         ....+......+.+++..||+.+|++|||+.++++.|+..
T Consensus       231 ~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         231 N---------RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             C---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1         0112233456688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=4.9e-35  Score=298.25  Aligned_cols=240  Identities=25%  Similarity=0.421  Sum_probs=195.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|...+.||+|++|.||+|....+ ..+|+|.+.......+.+.+|++++++++|+|++++++++.. +..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4577788999999999999988654 468999887655556779999999999999999999998854 56899999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc---------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---------  498 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~---------  498 (645)
                      +++|.+++....  ...++|..+..++.|++.||+|||+   .+++||||||+||++++++..++.|....         
T Consensus        84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          84 KGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence            999999997643  2348999999999999999999998   89999999999999999999999772211         


Q ss_pred             ----cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          499 ----TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       499 ----~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                          ..++..|+|||...+..++.++||||||+++|||++ |+.||.......    ...+.             .....
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~~~-------------~~~~~  221 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE----VLEQV-------------ERGYR  221 (260)
T ss_pred             ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH-------------HcCCC
Confidence                124567999999998999999999999999999999 899987543211    11111             11111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+...+..+.+++.+||+.+|.+||++++|++.|+.
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         222 MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            12233456778899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-35  Score=298.96  Aligned_cols=238  Identities=24%  Similarity=0.352  Sum_probs=196.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...+.||+|++|.||+|....++..+++|.+....      ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57888999999999999999998889999999876421      123568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      |+||+++++|.+++....    .+++.....++.|++.||+|||+   .+++||||||+||++++++.+++.|..     
T Consensus        82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            999999999999997643    38889999999999999999999   999999999999999999999997722     


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ....|+..|+|||.+.+..++.++||||||+++|||++|+.||.......   ...             .
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~-------------~  218 (263)
T cd06625         155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA---AIF-------------K  218 (263)
T ss_pred             cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH---HHH-------------H
Confidence                      12346778999999999889999999999999999999999986532110   110             1


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ..........+......+.+++..||+.+|.+|||++++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         219 IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            111111123334455678889999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.4e-35  Score=305.38  Aligned_cols=249  Identities=23%  Similarity=0.383  Sum_probs=198.6

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      ..++|+..++||+|+||.||+|...+     .+..||+|.+....  .....+.+|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            45678889999999999999997642     34579999876533  234568899999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      .++||||+++|+|.+++......      ...+.+..+..++.|++.||+|||+   ++++||||||+||+++.++.+++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence            99999999999999999753321      2346788899999999999999998   99999999999999999999999


Q ss_pred             ecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHh
Q 041096          493 ESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       493 ~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      .|...              ...++..|+|||.+.++.++.++|||||||++|||++ |..||......+    ..+..  
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~----~~~~~--  234 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ----VLKFV--  234 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH--
Confidence            88321              1134567999999999899999999999999999998 788886533211    11110  


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                                .+.. ....+......+.+++..|++.+|++|||+.++++.|++...
T Consensus       235 ----------~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         235 ----------MDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             ----------HcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence                      0110 112233345789999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.2e-35  Score=313.25  Aligned_cols=232  Identities=24%  Similarity=0.356  Sum_probs=187.8

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHH---hhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSII---ACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l---~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      |+..+.||+|+||.||+|....++..||||++...    ....+.+.+|++++   ++++||||+++++++...+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            56678999999999999999988999999998752    22334566666554   567899999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|..++...     .+++..+..++.|++.||+|||+   .+++||||||+|||++.++..|+.|..      
T Consensus        81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589          81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM  152 (324)
T ss_pred             EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence            9999999999888642     38999999999999999999999   999999999999999999999998732      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....|++.|+|||.+.+..++.++|||||||++|||++|+.||.......    ....            +...
T Consensus       153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~----~~~~------------i~~~  216 (324)
T cd05589         153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE----VFDS------------IVND  216 (324)
T ss_pred             CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH----HHHH------------HHhC
Confidence                  12358999999999999999999999999999999999999997543211    1110            0000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      .  ..++......+.+++..||+.||.+||     ++.++++
T Consensus       217 ~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         217 E--VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             C--CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            0  112233455678899999999999999     5666655

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.2e-35  Score=303.60  Aligned_cols=231  Identities=24%  Similarity=0.387  Sum_probs=180.4

Q ss_pred             eeccCCceEEEEEEECCC------------------------CeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeee
Q 041096          355 ILGRGAFGNVYKAYFASS------------------------GSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~------------------------~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      .||+|+||.||+|.+...                        ...|++|.+.... ....+|.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            599999999999986321                        2458888886532 234678899999999999999999


Q ss_pred             eeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC
Q 041096          410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN  489 (645)
Q Consensus       410 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~  489 (645)
                      +++|.+....++||||+++|+|..++.....   .+++..++.++.|+++||+|||+   ++++||||||+|||++.++.
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCc
Confidence            9999999999999999999999999875432   38899999999999999999998   99999999999999986542


Q ss_pred             -------eeeeccc--------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHH-cCCCCCCccccccchhhHH
Q 041096          490 -------ARLESSF--------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMVNLV  552 (645)
Q Consensus       490 -------~kl~d~~--------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~-tG~~P~~~~~~~~~~~~l~  552 (645)
                             .++.|..        ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||........    .
T Consensus       156 ~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~----~  231 (274)
T cd05076         156 AEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK----E  231 (274)
T ss_pred             ccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH----H
Confidence                   4565521        22346788999998875 56899999999999999995 68999875432110    0


Q ss_pred             HHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       553 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      .             ......  ..+......+.+++..||+.+|++||+|+++++.|+
T Consensus       232 ~-------------~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         232 R-------------FYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             H-------------HHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            0             001111  111112345788999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=7.4e-36  Score=320.60  Aligned_cols=239  Identities=24%  Similarity=0.289  Sum_probs=193.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ..++|+..++||+|+||.||++....++..+|+|++...    ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            346788899999999999999999989999999998642    2334557899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++....     ++......++.|++.||+|||+   .+|+||||||+|||++.++.+||+|..     
T Consensus       121 v~Ey~~gg~L~~~l~~~~-----l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYD-----IPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             EEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            999999999999986532     7788888899999999999999   999999999999999999999998721     


Q ss_pred             --------cccccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 --------TLTAGTMGYLAPEYLQYG----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                              ....||+.|+|||.+...    .++.++|||||||++|||++|+.||.........    .           
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~----~-----------  257 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY----S-----------  257 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH----H-----------
Confidence                    124589999999998653    4789999999999999999999999764321111    1           


Q ss_pred             hHHhhhhccCCCCH--HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 041096          565 IEAADKRLNGAFNE--DEMKRLLLVGLSCANPDSSA--RPSMRRVFQI  608 (645)
Q Consensus       565 ~~~~d~~l~~~~~~--~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~~  608 (645)
                       +++...-...++.  .....+.+++..|++.+|.+  ||++.++++.
T Consensus       258 -~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         258 -KIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             -HHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence             1111100011111  23456778889999999988  9999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.4e-35  Score=312.74  Aligned_cols=234  Identities=24%  Similarity=0.353  Sum_probs=191.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~  423 (645)
                      +|+..+.||+|+||.||+|....++..||+|++...    ....+.+..|++++..++| ++|+++++++.+.+..|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            477889999999999999999988999999988752    2345678889999999976 56888999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+++.|..       
T Consensus        81 E~~~~g~L~~~~~~~~~----~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05587          81 EYVNGGDLMYHIQQVGK----FKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF  153 (324)
T ss_pred             cCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence            99999999999976443    8899999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||..|+|||++.+..++.++|||||||++|||++|+.||......    .+...+            ... 
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i------------~~~-  216 (324)
T cd05587         154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQSI------------MEH-  216 (324)
T ss_pred             CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH------------HcC-
Confidence                 1235899999999999999999999999999999999999999764321    111111            000 


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSM-----RRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~~vl~  607 (645)
                       ...++......+.+++..|++.+|.+||+.     +++.+
T Consensus       217 -~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         217 -NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             -CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence             112223344567788899999999999986     56654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-36  Score=290.21  Aligned_cols=190  Identities=28%  Similarity=0.411  Sum_probs=173.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||.|+||.|.+++.+.++..+|+|++.+.    -...+...+|..+|+.+.||.++++++.|.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            3567789999999999999999999999999998873    234566789999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec---------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d---------  494 (645)
                      ||+++|-|..+|++.+.    ++.....-++.||+.||+|||+   ..|++|||||+|||||.+|-.|+.|         
T Consensus       124 eyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             eccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999999987654    8999999999999999999999   9999999999999999999998877         


Q ss_pred             cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       495 ~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                      .....|||+.|+|||++....+..++|.|||||++|||+.|..||.....
T Consensus       197 rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  197 RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP  246 (355)
T ss_pred             cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence            34456899999999999999999999999999999999999999987543

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.4e-35  Score=302.62  Aligned_cols=245  Identities=24%  Similarity=0.389  Sum_probs=196.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..++||+|+||+||+|++..++.    .||+|.+...  .....++.+|+.++..++|+||++++++|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence            567888999999999999999765555    4799988652  33456789999999999999999999999754 5789


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---  498 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~---  498 (645)
                      ++||+++|+|.+++.....   .+++..++.++.|++.||+|||+   ++++||||||+|||++.++.+|+.|....   
T Consensus        86 ~~~~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKD---RIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEEcCCCCCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeec
Confidence            9999999999999976432   38999999999999999999999   99999999999999999999999873211   


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ..++..|+|||...+..++.++|||||||++|||++ |..||......    .+..+            
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~------------  223 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR----EIPDL------------  223 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH------------
Confidence                       123567999999999999999999999999999998 88998653221    11111            


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                       +........+......+.+++..||+.||++||++.++++.|+.....+
T Consensus       224 -~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         224 -LEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             -HHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence             1111111122334567888999999999999999999999998765544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-36  Score=317.36  Aligned_cols=242  Identities=25%  Similarity=0.423  Sum_probs=204.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCC----CeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASS----GSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .....++||.|.||.||+|++.+.    .-.||||..+.  .....+.|+.|..+|++++||||++|+|.|.+. ..|||
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv  468 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV  468 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence            344567899999999999997432    34689998776  345578899999999999999999999999874 78999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----  498 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----  498 (645)
                      ||.++-|-|++||+.+...   |+.......+.||+.+|+|||+   .+.|||||..+|||+.+...+|++|..-.    
T Consensus       469 mEL~~~GELr~yLq~nk~s---L~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e  542 (974)
T KOG4257|consen  469 MELAPLGELREYLQQNKDS---LPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLE  542 (974)
T ss_pred             EecccchhHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence            9999999999999877654   8999999999999999999999   99999999999999999999999883211    


Q ss_pred             ---------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          499 ---------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       499 ---------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                               ..-...|||||.+..+++|.+||||.|||.+||++. |..||.+....+..                 -.+
T Consensus       543 d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-----------------~~i  605 (974)
T KOG4257|consen  543 DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-----------------GHI  605 (974)
T ss_pred             ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-----------------EEe
Confidence                     122457999999999999999999999999999988 99999886554332                 222


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ...-+...+++|+..++.++.+||..+|.+||++.++...|.++.+
T Consensus       606 EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  606 ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            3333456788999999999999999999999999999887765433

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8e-35  Score=314.42  Aligned_cols=251  Identities=21%  Similarity=0.224  Sum_probs=193.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||++....+++.||+|...     ...+.+|++++++++||||+++++++......++|+|++ 
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~-  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY-  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-
Confidence            57999999999999999999999999999999653     235789999999999999999999999999999999999 


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      .++|..++....    .+++.+++.++.|++.||+|||+   .+|+||||||+||||+.++.+||.|...          
T Consensus       166 ~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        166 KTDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            478998886543    28999999999999999999999   8999999999999999999999987321          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc---hhhHHHHHHhhhc----c------
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK---MVNLVDWVWGLYA----E------  561 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~---~~~l~~~~~~~~~----~------  561 (645)
                         ...||+.|+|||++.+..++.++|||||||++|||++|+.||........   ....+..+.....    +      
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~  318 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ  318 (391)
T ss_pred             ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence               13589999999999999999999999999999999999988754321110   0011111111000    0      


Q ss_pred             CchhHHh---hhh-cc--CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          562 GRIIEAA---DKR-LN--GAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       562 ~~~~~~~---d~~-l~--~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ..+.+..   ... ..  ...     ..+.+..+.+++..|++.||++|||++|+++  .+..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            0001000   000 00  000     0123456888999999999999999999985  4544

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.9e-35  Score=307.22  Aligned_cols=248  Identities=23%  Similarity=0.370  Sum_probs=198.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-------CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-------SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-------~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      ..+|...+.||+|+||.||+|...       ..+..+|+|.....  ....+.+.+|+.++..+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            356778899999999999999752       23457999988753  33456789999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +..++||||+++|+|.+++.....            ....++|.+++.++.|+++||+|||+   .+++||||||+||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence            999999999999999999976432            12348899999999999999999999   999999999999999


Q ss_pred             cCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++..++.|...              ...++..|+|||++.+..++.++||||||+++|||++ |..||.....    .
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~  246 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----E  246 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH----H
Confidence            9999999977311              1234567999999998899999999999999999998 7888865321    1


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+.+             .+........+......+.+++..||+.+|.+||+|.++++.|+++..
T Consensus       247 ~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         247 ELFK-------------LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHH-------------HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            1111             111111112233456678889999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.7e-35  Score=297.50  Aligned_cols=242  Identities=28%  Similarity=0.452  Sum_probs=200.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|...++||+|+||.||+|...+ +..+|||.+.......+++.+|+.++++++|+||+++++++......++||||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            4678889999999999999999864 577999998876666778999999999999999999999999988999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++....  ...+++.++..++.|++.||+|||+   .+++|+||||+||+++.++..++.|...         
T Consensus        84 ~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          84 SKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             CCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence            9999999997643  2348999999999999999999998   8999999999999999999999987321         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...++..|+|||.+.+..++.++||||||++++|+++ |+.||......    ...+.             +....
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~-------------~~~~~  221 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR----EVLEQ-------------VERGY  221 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH-------------HHcCC
Confidence                1123457999999998899999999999999999998 99998653221    11111             11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ....+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         222 RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            112223335678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-35  Score=315.21  Aligned_cols=245  Identities=22%  Similarity=0.326  Sum_probs=206.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +-|+..+.||+|+-|.|-+|++..+|+.+|||++.+.    ......+.+||-+|+-|.|||++++++.+++..++|||.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            3456678899999999999999999999999998763    333456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|-|.++|-.++.    ++..+..+++.||..|+.|+|.   .+|+||||||+|+|||.+++.||.|..       
T Consensus        92 Eyv~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EecCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence            99999999999987654    8999999999999999999999   999999999999999999999998832       


Q ss_pred             ----cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ...||++-|.|||++.+.+| ..++||||.|||||.|++|+.||++.+    ...+...             +...
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN----ir~LLlK-------------V~~G  227 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN----IRVLLLK-------------VQRG  227 (786)
T ss_pred             CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc----HHHHHHH-------------HHcC
Confidence                34589999999999999998 579999999999999999999998532    2222221             1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLV  617 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~  617 (645)
                      . -+.+.+.......|+..|+..||++|.|++||++  .|.+-...+.
T Consensus       228 ~-f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~  274 (786)
T KOG0588|consen  228 V-FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS  274 (786)
T ss_pred             c-ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence            1 1234555667788889999999999999999998  4565555443

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-36  Score=321.47  Aligned_cols=239  Identities=23%  Similarity=0.285  Sum_probs=190.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..||||.+...    ....+.+.+|++++++++||||+++++++.+.+..||||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4688889999999999999999999999999987652    223456888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++|+|.+++....    .+++.....++.|++.||+|||+   .+|+||||||+|||++.++.+++.|...      
T Consensus        81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~  153 (377)
T cd05629          81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK  153 (377)
T ss_pred             eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence            9999999999997543    38888999999999999999999   9999999999999999999999987321      


Q ss_pred             -----------------------------------------------------ccccCCcccCcccccCCCCCcchhHHH
Q 041096          498 -----------------------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFS  524 (645)
Q Consensus       498 -----------------------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~S  524 (645)
                                                                           ..+||+.|+|||++.+..++.++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  233 (377)
T cd05629         154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS  233 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence                                                                 135899999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCC---CCC
Q 041096          525 YGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA---RPS  601 (645)
Q Consensus       525 fGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~---RPt  601 (645)
                      |||++|||++|+.||...........+..|.              ..+.-.-.......+.+++..|+. +|.+   ||+
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~--------------~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~  298 (377)
T cd05629         234 LGAIMFECLIGWPPFCSENSHETYRKIINWR--------------ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG  298 (377)
T ss_pred             cchhhhhhhcCCCCCCCCCHHHHHHHHHccC--------------CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence            9999999999999997643221111111110              001000001123446667778887 5665   469


Q ss_pred             HHHHHHH
Q 041096          602 MRRVFQI  608 (645)
Q Consensus       602 ~~~vl~~  608 (645)
                      +.++++.
T Consensus       299 ~~~~l~h  305 (377)
T cd05629         299 AHEIKSH  305 (377)
T ss_pred             HHHHhcC
Confidence            9998874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2e-35  Score=305.17  Aligned_cols=253  Identities=25%  Similarity=0.325  Sum_probs=200.4

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeee--
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCA--  414 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~--  414 (645)
                      +.++.+..+.++|+..+.||+|+||.||++....++..+|+|..........++.+|+.++.++ +|+||++++++|.  
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            3455666788999999999999999999999988899999998876544556788999999999 6999999999884  


Q ss_pred             ---eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          415 ---EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       415 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                         .++..++||||+++++|.+++.........+++..+..++.|+++||.|||+   .+++||||||+||+++.++.++
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEE
Confidence               3457899999999999999886543333458999999999999999999999   9999999999999999999999


Q ss_pred             eeccc------------cccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          492 LESSF------------TLTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       492 l~d~~------------~~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                      +.|..            ....|+..|+|||++..     ..++.++|||||||++|||++|+.||.......   .+...
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---~~~~~  241 (286)
T cd06638         165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---ALFKI  241 (286)
T ss_pred             EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH---HHhhc
Confidence            97721            12358889999998853     457889999999999999999999987543211   11100


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                           ...     ..+.+  ..+......+..++..||+.+|++|||++++++.
T Consensus       242 -----~~~-----~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         242 -----PRN-----PPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             -----ccc-----CCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence                 000     00000  0111223468889999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.2e-35  Score=300.58  Aligned_cols=242  Identities=23%  Similarity=0.308  Sum_probs=194.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||.||+|+...++..+|+|+.... ......+.+|+.++++++|+||+++++++...+..++||||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            4688889999999999999999888999999988653 334556889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++....    .+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|..          
T Consensus        89 ~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          89 GGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence            9999999986543    38999999999999999999998   999999999999999999999997721          


Q ss_pred             --cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 --TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                        ....|+..|+|||.+.   ...++.++|||||||++|||++|+.||............        ....   ...+.
T Consensus       162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~--------~~~~---~~~~~  230 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--------SKSN---FQPPK  230 (267)
T ss_pred             ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee--------ecCC---CCCCC
Confidence              1235778999999884   345788999999999999999999998653321111000        0000   00011


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      ..  ........+.+++..||+.+|++||+++++++.|
T Consensus       231 ~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         231 LK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             Cc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            10  0112346788999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2e-35  Score=310.41  Aligned_cols=229  Identities=21%  Similarity=0.321  Sum_probs=186.5

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +.||+|+||.||+|....++..||+|.++..    ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999999988999999988753    23345567788888764 899999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|.+++....    .+++.++..++.|++.||+|||+   .+++||||||+|||++.++..++.|..            
T Consensus        81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05619          81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT  153 (316)
T ss_pred             CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence            99999997643    28899999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||......    .+...+.          ...+    .+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~----~~~~~i~----------~~~~----~~  215 (316)
T cd05619         154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE----ELFQSIR----------MDNP----CY  215 (316)
T ss_pred             eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH----HHHHHHH----------hCCC----CC
Confidence            1235889999999999999999999999999999999999999754321    1111110          0001    12


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMR-RVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-~vl~  607 (645)
                      +......+.+++..||+.+|++||++. ++.+
T Consensus       216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            222345577888999999999999997 6643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=3.4e-35  Score=300.57  Aligned_cols=238  Identities=28%  Similarity=0.415  Sum_probs=191.8

Q ss_pred             ceeccCCceEEEEEEECCCC------eEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFASSG------SVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~------~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.||+|+||.||+|+..+..      ..+++|.+....  .....+.+|+.+++.++||||++++++|...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36999999999999986433      678999876532  4567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCC---CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-----Ceeeecccc
Q 041096          426 MPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-----NARLESSFT  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-----~~kl~d~~~  497 (645)
                      +++++|.+++.....   ....++|.+++.++.|++.||+|||+   .+++|+||||+||+++.+.     ..++.|...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            999999999975432   22348899999999999999999998   8999999999999999877     788876221


Q ss_pred             --------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccC
Q 041096          498 --------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       498 --------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                    ...++..|+|||++.++.++.++|||||||++|||++ |+.||......    .....+       
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~----~~~~~~-------  226 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ----EVLQHV-------  226 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH----HHHHHH-------
Confidence                          1234578999999999999999999999999999998 99998653321    111111       


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                            ........+...+..+.+++.+||..+|.+||+++++++.|++
T Consensus       227 ------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         227 ------TAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ------hcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence                  1111112233456778899999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=4e-35  Score=305.02  Aligned_cols=251  Identities=22%  Similarity=0.393  Sum_probs=195.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECC----------------CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS----------------SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~----------------~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      ++|+..+.||+|+||.||++....                ++..+|+|.+...  .....++.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            568889999999999999985432                3457899988753  3345689999999999999999999


Q ss_pred             eeeeeeCCeEEEEEecCCCCCHhHHhhhcCCC-------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 041096          410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI  482 (645)
Q Consensus       410 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  482 (645)
                      ++++...+..++||||+++++|.+++......       ...+++.+++.++.|++.||+|||+   .+++||||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence            99999999999999999999999999764321       1347889999999999999999999   8999999999999


Q ss_pred             EEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCcccccc
Q 041096          483 MLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC--GRRPIERETEGH  546 (645)
Q Consensus       483 lld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t--G~~P~~~~~~~~  546 (645)
                      |++.++.+++.|...              ...++..|+|||....+.++.++|||||||++|||++  |..||.......
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            999999999977321              1123567999999888899999999999999999998  778886543211


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                          ........+...      ........+..++..+.+++.+||+.+|.+||+|.+|++.|++
T Consensus       242 ----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         242 ----VIENTGEFFRDQ------GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             ----HHHHHHHHHhhc------cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence                111111111000      0000011122345788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.8e-35  Score=305.14  Aligned_cols=253  Identities=26%  Similarity=0.352  Sum_probs=202.4

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      +.++++..++++|...+.||+|+||.||++....++..+|+|.+.........+.+|+.++.++ +|+|++++++++...
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            4556667788999999999999999999999988899999999876555566788999999999 799999999998754


Q ss_pred             -----CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          417 -----GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       417 -----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                           +..++|+||+++++|.+++.........+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEE
Confidence                 36899999999999999987543334458999999999999999999998   9999999999999999999999


Q ss_pred             eeccc------------cccccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          492 LESSF------------TLTAGTMGYLAPEYLQYG-----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       492 l~d~~------------~~~~gt~~y~APE~~~~~-----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                      +.|..            ....|+..|+|||.+...     .++.++|||||||++|||++|+.||.......   .+..+
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~---~~~~~  245 (291)
T cd06639         169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK---TLFKI  245 (291)
T ss_pred             EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH---HHHHH
Confidence            98721            123577889999998643     36899999999999999999999997543211   11111


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .    . ..     .+.+  ..+.+....+.+++..||+.+|++||++.++++.
T Consensus       246 ~----~-~~-----~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         246 P----R-NP-----PPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             h----c-CC-----CCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            0    0 00     0011  1122334568899999999999999999999863

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.1e-35  Score=310.24  Aligned_cols=229  Identities=24%  Similarity=0.328  Sum_probs=184.9

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|....++..||+|.++..    ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999988752    22344556677777654 899999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .++..+...++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..            
T Consensus        81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~  153 (316)
T cd05592          81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA  153 (316)
T ss_pred             CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence            99999987643    28899999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||..|+|||.+.+..++.++|||||||++|||++|+.||...+...    +...+             .. ....+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~----~~~~i-------------~~-~~~~~  215 (316)
T cd05592         154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE----LFDSI-------------LN-DRPHF  215 (316)
T ss_pred             ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH----HHHHH-------------Hc-CCCCC
Confidence            12358999999999999999999999999999999999999997643211    11100             00 01122


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMR-RVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-~vl~  607 (645)
                      +......+.+++..||+.+|++||++. ++++
T Consensus       216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            333445667888999999999999975 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.9e-35  Score=302.23  Aligned_cols=235  Identities=24%  Similarity=0.302  Sum_probs=187.2

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||.||++....++..+|+|++...    ......+..|++++++++||||+++++++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999999988999999988642    22334566799999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------cccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------TLTA  500 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------~~~~  500 (645)
                      ..++.....  ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++..++.|..           ....
T Consensus        81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  155 (277)
T cd05607          81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA  155 (277)
T ss_pred             HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence            988865432  238999999999999999999999   999999999999999999999998722           1245


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      |+..|+|||++.+..++.++|||||||++|||++|+.||............   ....         ....... .....
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~---~~~~---------~~~~~~~-~~~~~  222 (277)
T cd05607         156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL---KRRT---------LEDEVKF-EHQNF  222 (277)
T ss_pred             CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHH---HHHh---------hcccccc-ccccC
Confidence            889999999999888999999999999999999999999753321111111   0000         0001100 01123


Q ss_pred             HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          581 MKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...+.+++..||+.||++||+++|+++.
T Consensus       223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         223 TEESKDICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             CHHHHHHHHHHhccCHhhCCCCccchhh
Confidence            4567889999999999999999776643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.4e-35  Score=302.07  Aligned_cols=232  Identities=24%  Similarity=0.392  Sum_probs=182.9

Q ss_pred             ceeccCCceEEEEEEECCCCe-------EEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFASSGS-------VAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~-------~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.||+|+||.||+|.....+.       .+++|..... ....+.+.+|+.+++.++|||++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            369999999999998865433       4788877653 23456788999999999999999999999998999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe--------eeeccc-
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA--------RLESSF-  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~--------kl~d~~-  496 (645)
                      +++|+|.+++.....   .+++..++.++.|++.||+|||+   .+++||||||+||+++.++..        ++.|.. 
T Consensus        81 ~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~  154 (258)
T cd05078          81 VKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI  154 (258)
T ss_pred             CCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence            999999999976543   38999999999999999999999   999999999999999887764        555421 


Q ss_pred             -------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCC-CCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 -------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGR-RPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~-~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                             ....++..|+|||++.+ +.++.++||||||+++|||++|. .|+..... ..   ...             .
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~---~~~-------------~  217 (258)
T cd05078         155 SITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QK---KLQ-------------F  217 (258)
T ss_pred             ccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HH---HHH-------------H
Confidence                   22457889999999986 45799999999999999999985 55543221 10   000             0


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ...  ....+......+.+++..||+.+|++|||++++++.|+
T Consensus       218 ~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         218 YED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            001  11222223356789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.1e-36  Score=317.53  Aligned_cols=239  Identities=27%  Similarity=0.329  Sum_probs=193.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..+|+|++...    ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4688899999999999999999989999999998763    224567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||.|..       
T Consensus        81 e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          81 EYQPGGDLLSLLNRYED---QFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             CCCCCCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            99999999999976532   38999999999999999999999   999999999999999999999998732       


Q ss_pred             ------cccccCCcccCccccc------CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------TLTAGTMGYLAPEYLQ------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~------~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                            ....||+.|+|||++.      ...++.++|||||||++|||++|+.||...........+.       .... 
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~-------~~~~-  226 (330)
T cd05601         155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM-------NFQR-  226 (330)
T ss_pred             CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH-------cCCC-
Confidence                  1235899999999986      4567899999999999999999999997643211111110       0000 


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                            .+...........+.+++..|++ +|.+||+++++++
T Consensus       227 ------~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         227 ------FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             ------ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence                  01001111234557778888997 9999999999985

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.3e-35  Score=312.50  Aligned_cols=229  Identities=26%  Similarity=0.337  Sum_probs=188.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|+...++..+|+|++...    ....+.+..|.+++..+ +||||+++++++...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999999988999999988752    23345678899998876 799999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||++.++.++|.|..            
T Consensus        81 ~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  153 (321)
T cd05591          81 GDLMFQIQRSRK----FDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT  153 (321)
T ss_pred             CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence            999999876543    8999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||.......    +...+            ....  ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~----~~~~i------------~~~~--~~~  215 (321)
T cd05591         154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD----LFESI------------LHDD--VLY  215 (321)
T ss_pred             cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH----HHHHH------------HcCC--CCC
Confidence            12358999999999999999999999999999999999999997643211    11111            0000  011


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARP-------SMRRVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RP-------t~~~vl~  607 (645)
                      +......+.+++..|++.+|++||       +++++++
T Consensus       216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            222345677888999999999999       7888865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.2e-35  Score=312.02  Aligned_cols=237  Identities=24%  Similarity=0.319  Sum_probs=189.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||++....++..+|+|.+...    ......+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999999998999999988752    23345677898888877 799999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|..            
T Consensus        81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~  153 (329)
T cd05618          81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT  153 (329)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence            99999886543    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc-hhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK-MVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||........ ......+......        ...  ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--------~~~--~~  223 (329)
T cd05618         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--------EKQ--IR  223 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh--------cCC--CC
Confidence            123589999999999999999999999999999999999999964221111 1111111111111        111  12


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPS------MRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~~vl~  607 (645)
                      ++......+.+++..||+.||++||+      +.++++
T Consensus       224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  261 (329)
T ss_pred             CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence            33344566788999999999999998      466644

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=6.2e-36  Score=322.02  Aligned_cols=239  Identities=23%  Similarity=0.311  Sum_probs=190.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..+|+|.+...    ......+.+|++++++++|+||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3688899999999999999999988999999988652    223456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++|+|.+++.+..    .++......++.||+.||+|||+   .+|+||||||+|||++.++..+|.|...      
T Consensus        81 E~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          81 DYIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            9999999999997643    37888889999999999999999   9999999999999999999999987421      


Q ss_pred             -------------------------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHH
Q 041096          498 -------------------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVV  528 (645)
Q Consensus       498 -------------------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvv  528 (645)
                                                                       ..+||+.|+|||++.+..++.++|||||||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  233 (376)
T cd05598         154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  233 (376)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence                                                             1368999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC---CHHHH
Q 041096          529 VLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP---SMRRV  605 (645)
Q Consensus       529 l~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~~v  605 (645)
                      +|||++|+.||...........+..|.              ..+...........+.+++..|+ .+|.+|+   ++.++
T Consensus       234 lyell~G~~Pf~~~~~~~~~~~i~~~~--------------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el  298 (376)
T cd05598         234 LYEMLVGQPPFLADTPAETQLKVINWE--------------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI  298 (376)
T ss_pred             eeehhhCCCCCCCCCHHHHHHHHhccC--------------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence            999999999997643221111111110              00000001112233444445554 4999999   88888


Q ss_pred             HHH
Q 041096          606 FQI  608 (645)
Q Consensus       606 l~~  608 (645)
                      ++.
T Consensus       299 l~h  301 (376)
T cd05598         299 KAH  301 (376)
T ss_pred             hCC
Confidence            764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.1e-35  Score=307.49  Aligned_cols=246  Identities=23%  Similarity=0.373  Sum_probs=197.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-------CCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-------SGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      ++|...+.||+|+||.||++....       ....+|+|.+...  .....++.+|++++.++ +|+||++++++|...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            568889999999999999998642       2356999988753  33456788999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..++||||+++|+|.+++.....            ....++|.+++.++.|++.||+|||+   .+++||||||+||+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence            99999999999999999976432            12348999999999999999999998   9999999999999999


Q ss_pred             CCCCeeeeccccc--------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhh
Q 041096          486 ANFNARLESSFTL--------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~~~~--------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~  550 (645)
                      .++.+++.|....              ..++..|+|||.+.+..++.++|||||||++|||++ |+.||......    .
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~----~  250 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----E  250 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH----H
Confidence            9999999773211              113457999999998899999999999999999998 88888643211    1


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      +.             +.+........+......+.+++..||+.+|++||+|.+|++.|+.+.
T Consensus       251 ~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         251 LF-------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HH-------------HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            11             111111112233445567888999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.6e-35  Score=309.95  Aligned_cols=229  Identities=24%  Similarity=0.343  Sum_probs=189.7

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||+||+|....++..+|+|++...    ......+..|++++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999988752    23345677899999888 699999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++.++..++.|++.||+|||+   .+++||||||+|||++.++..++.|..            
T Consensus        81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  153 (318)
T cd05570          81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT  153 (318)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence            99999987653    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...+|+..|+|||++.+..++.++|||||||++|||++|+.||......    .+....            ....  ..+
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~----~~~~~i------------~~~~--~~~  215 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED----ELFQSI------------LEDE--VRY  215 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH----HHHHHH------------HcCC--CCC
Confidence            1235889999999999999999999999999999999999999754321    111110            0000  112


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSM-----RRVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~~vl~  607 (645)
                      +......+.+++..||+.||.+||++     .++++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            23345667889999999999999999     88865

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.5e-35  Score=311.57  Aligned_cols=237  Identities=24%  Similarity=0.327  Sum_probs=189.9

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||++....++..||+|+++..    ......+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999989999999998752    23345688899999998 699999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||.|..            
T Consensus        81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~  153 (329)
T cd05588          81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT  153 (329)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence            99999886543    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc-hhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK-MVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||........ .....++......        ....  .
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~  223 (329)
T cd05588         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL--------EKQI--R  223 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH--------cCCC--C
Confidence            123589999999999999999999999999999999999999964321110 0111111111111        1111  1


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPS------MRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~~vl~  607 (645)
                      .+......+.+++..|++.||.+||+      ++++++
T Consensus       224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            22333456788889999999999997      677764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.1e-35  Score=313.82  Aligned_cols=230  Identities=27%  Similarity=0.340  Sum_probs=189.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      +.||+|+||.||++....++..+|+|.+...    ......+..|++++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999888999999988752    233456788999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------c
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------T  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~  497 (645)
                      +|..++....    .+++..+..++.||+.||+|||+  ..+|+||||||+|||++.++.+||.|..            .
T Consensus        81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  154 (325)
T cd05594          81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK  154 (325)
T ss_pred             cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence            9999887543    38999999999999999999996  2699999999999999999999998732            1


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||..|+|||++.+..++.++|||||||++|||++|+.||......    .+.....            ...  ..++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~----~~~~~i~------------~~~--~~~p  216 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELIL------------MEE--IRFP  216 (325)
T ss_pred             cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH----HHHHHHh------------cCC--CCCC
Confidence            235899999999999999999999999999999999999999754321    1111110            000  0122


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          578 EDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ......+.+++..|++.||++|+     +++++++
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            23345677888999999999996     8999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=6.2e-35  Score=296.35  Aligned_cols=239  Identities=24%  Similarity=0.414  Sum_probs=195.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .+|+..+.||+|+||.||+|.+.. +..+|+|.+.........|.+|++++++++|||++++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            356778899999999999998864 6689999887765556789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +++|.+++.....   .+++..+..++.|++.||+|||+   .+++||||||+||+++.++..++.|...          
T Consensus        83 ~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          83 HGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             CCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence            9999999975432   38899999999999999999998   8999999999999999999999877321          


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ...++.+|+|||.+.++.++.++||||||+++|||++ |+.||......    .+.+.             +.....
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~~-------------~~~~~~  219 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS----EVVET-------------INAGFR  219 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH----HHHHH-------------HhCCCC
Confidence               1123468999999998899999999999999999998 99998753321    11111             000011


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ...+......+.+++.+||+.+|++||++.++++.|.
T Consensus       220 ~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         220 LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            1111123467889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3e-35  Score=303.02  Aligned_cols=256  Identities=24%  Similarity=0.367  Sum_probs=198.9

Q ss_pred             CCCcCceeccCCceEEEEEEECC----CCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFAS----SGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELL  420 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~----~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~  420 (645)
                      .|...+.||+|+||.||+|.+..    ++..+|+|.+.....  ..+.|.+|++++++++|+||+++++++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            46667889999999999998753    378999999887554  36789999999999999999999999987  55789


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---  497 (645)
                      ++|||+++++|.+++.....   .+++..+..++.|++.||+|||+   .+++||||||+||+++.++..+++|...   
T Consensus        85 lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            99999999999999976543   38999999999999999999998   9999999999999999999999987211   


Q ss_pred             ------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          498 ------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       498 ------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                  ...++..|+|||.+....++.++||||||+++|||++|+.|+.........  .............+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~  236 (284)
T cd05038         159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR--MIGIAQGQMIVTRLL  236 (284)
T ss_pred             cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc--ccccccccccHHHHH
Confidence                        112345699999999889999999999999999999999998653211100  000000000000111


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +.+........+..++..+.+++.+||+.+|++||||.+|+++|+.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            22222222222334457789999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.9e-35  Score=310.74  Aligned_cols=248  Identities=24%  Similarity=0.333  Sum_probs=188.3

Q ss_pred             cCceeccC--CceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          352 SNRILGRG--AFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       352 ~~~~lG~G--~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ..++||+|  +|++||++....++..||+|++...   ....+.+.+|+++++.++||||++++++|..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35679999  7899999999999999999998753   223456778999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++|+|.+++.....  ..+++..++.++.|++.||+|||+   .+++||||||+|||++.++..++.+..          
T Consensus        82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence            99999999975432  238999999999999999999998   999999999999999999888876521          


Q ss_pred             ---------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc----c
Q 041096          497 ---------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA----E  561 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~----~  561 (645)
                               ....++..|+|||++..  ..++.++|||||||++|||++|+.||........   ..........    .
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~  233 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKLNGTVPCLLDT  233 (327)
T ss_pred             cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH---HHHHhcCCccccccc
Confidence                     11245677999999976  4689999999999999999999999975432111   1000000000    0


Q ss_pred             Cch-hHH---------hhhh-----------------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 GRI-IEA---------ADKR-----------------LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ~~~-~~~---------~d~~-----------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ... .+.         .+..                 ............+.+++..||+.||++|||++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence            000 000         0000                 000111223457889999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=6.6e-35  Score=296.47  Aligned_cols=240  Identities=30%  Similarity=0.429  Sum_probs=194.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeee-eCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA-EKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~-~~~~~~lV~Ey~  426 (645)
                      ++|...+.||+|+||.||++...  +..+++|...... ..+.+.+|+.++++++|+|++++++++. +.+..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            36778899999999999999876  6788999886533 3567899999999999999999999764 456789999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++.....  ..+++..++.++.|++.||+|||+   ++++||||||+||+++.++.+|++|...         
T Consensus        83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  157 (256)
T cd05082          83 AKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  157 (256)
T ss_pred             CCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence            99999999976432  348999999999999999999998   9999999999999999999999987321         


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...++..|+|||++....++.++|||||||++|||++ |+.||.....    ..+...+             ........
T Consensus       158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~-------------~~~~~~~~  220 (256)
T cd05082         158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVPRV-------------EKGYKMDA  220 (256)
T ss_pred             CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH-------------hcCCCCCC
Confidence            1234567999999998899999999999999999997 9999865321    1111111             11111222


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ....+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            334566788999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=7.5e-35  Score=300.31  Aligned_cols=240  Identities=23%  Similarity=0.321  Sum_probs=192.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..++||+|+||.||+|....++..+|+|.....  ....+.+.+|++++.+++||||+++++++...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3577788999999999999999888999999987653  33456799999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|..+.        .+++.....++.|++.||+|||+   .+++|+||||+|||++.++..++.|..         
T Consensus        81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~  149 (279)
T cd06619          81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI  149 (279)
T ss_pred             CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence            9999997652        26788899999999999999999   999999999999999999999998732         


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                       ....|+..|+|||++.+..++.++||||||+++|||++|+.||................          +.+.......
T Consensus       150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----------~~~~~~~~~~  219 (279)
T cd06619         150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL----------QCIVDEDPPV  219 (279)
T ss_pred             ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH----------HHHhccCCCC
Confidence             22468889999999999899999999999999999999999997543221111111110          0000000001


Q ss_pred             C-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          576 F-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       576 ~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      . .......+.+++..|++.+|++||+++++++.
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            1 11233467888999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.5e-35  Score=311.95  Aligned_cols=224  Identities=26%  Similarity=0.363  Sum_probs=185.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|....++..||+|++...    ....+.+..|..++..+ +||||+++++++...+..|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999988652    23455678888888877 699999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++.....    +++..+..++.|++.||+|||+   .+++||||||+|||++.++.+++.|..            
T Consensus        81 g~L~~~i~~~~~----l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~  153 (320)
T cd05590          81 GDLMFHIQKSRR----FDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT  153 (320)
T ss_pred             chHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence            999999876543    8999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||......    .+...+    ..+.          ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----~~~~~i----~~~~----------~~~  215 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED----DLFEAI----LNDE----------VVY  215 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHH----hcCC----------CCC
Confidence            1235899999999999999999999999999999999999999764321    111111    0000          012


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                      +......+.+++..|++.||++||++
T Consensus       216 ~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         216 PTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            22334567888899999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.3e-35  Score=323.60  Aligned_cols=259  Identities=20%  Similarity=0.301  Sum_probs=192.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--------C
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--------G  417 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------~  417 (645)
                      ..++|...++||+|+||.||+|....++..||||++....   ....+|+.++++++|+||+++++++...        .
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            3467999999999999999999998889999999876532   2345799999999999999998876432        2


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~  496 (645)
                      .+++||||++ ++|.+++.........+++.....++.|++.||+|||+   .+|+||||||+||||+.++ .+||+|..
T Consensus       141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFG  216 (440)
T PTZ00036        141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFG  216 (440)
T ss_pred             EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence            4679999997 57877776543334458999999999999999999999   9999999999999999765 68998722


Q ss_pred             -----------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 -----------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........++... ....... 
T Consensus       217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~-~~p~~~~-  294 (440)
T PTZ00036        217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVL-GTPTEDQ-  294 (440)
T ss_pred             cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHH-
Confidence                       12357899999999875 468999999999999999999999997654322222211110 0000000 


Q ss_pred             hHHhh-------------hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          565 IEAAD-------------KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       565 ~~~~d-------------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      ...+.             ..+...++......+.+++..||+.||.+|||+.|+++  .++...
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            00000             01111122233457889999999999999999999985  455443

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=8.3e-35  Score=302.84  Aligned_cols=237  Identities=24%  Similarity=0.318  Sum_probs=195.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .+|+..+.||+|+||.||+|....++..+++|.+... ......+.+|+.+++.++|+|++++++.+......++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            4688889999999999999999888999999988763 334567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++...     .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..          
T Consensus       100 ~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654         100 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             CCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            999999998643     27899999999999999999999   999999999999999999999998732          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||.+.+..++.++|||||||++|||++|+.||.......   .+..+    ..        ......
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~---~~~~~----~~--------~~~~~~  236 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLI----AT--------NGTPEL  236 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---hHHHH----hc--------CCCCCC
Confidence              12367889999999998889999999999999999999999997543211   11100    00        000001


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+......+.+++.+||..+|++||++.++++
T Consensus       237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            122334566888999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=8.4e-35  Score=297.27  Aligned_cols=232  Identities=24%  Similarity=0.401  Sum_probs=180.8

Q ss_pred             ceeccCCceEEEEEEECCC------------CeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          354 RILGRGAFGNVYKAYFASS------------GSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~------------~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      +.||+|+||.||+|+....            ...+++|.+.... .....|.+|+.+++.++||||++++++|......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            3689999999999986422            2358888876533 33457889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-------eeee
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-------ARLE  493 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-------~kl~  493 (645)
                      +||||+++|+|..++.....   .+++..++.++.||++||+|||+   ++++||||||+|||++.++.       .++.
T Consensus        81 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~  154 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSD---VLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLS  154 (262)
T ss_pred             EEEecccCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence            99999999999999875432   38999999999999999999998   99999999999999987654       5665


Q ss_pred             ccc--------cccccCCcccCccccc-CCCCCcchhHHHHHHHHHHHH-cCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          494 SSF--------TLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       494 d~~--------~~~~gt~~y~APE~~~-~~~~t~ksDV~SfGvvl~El~-tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                      |..        ....++..|+|||++. ...++.++|||||||++|||+ .|+.|+......+    . ..   ..    
T Consensus       155 d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~-~~---~~----  222 (262)
T cd05077         155 DPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----K-ER---FY----  222 (262)
T ss_pred             CCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----H-HH---HH----
Confidence            521        2235788899999887 467899999999999999997 5888876432110    0 00   00    


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                           ....  .........+.+++..||+.||.+||++.++++.|+
T Consensus       223 -----~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         223 -----EGQC--MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             -----hcCc--cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                 0000  011112356788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.4e-35  Score=316.56  Aligned_cols=241  Identities=24%  Similarity=0.300  Sum_probs=191.8

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      ....++|+..+.||+|+||.||++....++..+|+|.+..    .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            3445789999999999999999999999999999998864    223345688999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      |+||||+++|+|.+++....     ++..+...++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..   
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~-----~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~  190 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCM  190 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccce
Confidence            99999999999999996432     7888999999999999999999   999999999999999999999998721   


Q ss_pred             ----------cccccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          497 ----------TLTAGTMGYLAPEYLQYG----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                ....||+.|+|||++...    .++.++||||+||++|||++|+.||.........              
T Consensus       191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~--------------  256 (370)
T cd05621         191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY--------------  256 (370)
T ss_pred             ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH--------------
Confidence                      234589999999998754    3788999999999999999999999764321111              


Q ss_pred             chhHHhhhhccCCCCH--HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 041096          563 RIIEAADKRLNGAFNE--DEMKRLLLVGLSCANPDSSA--RPSMRRVFQI  608 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~--~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~~  608 (645)
                        ..+++......++.  .....+.+++..|+..++.+  ||++.++++.
T Consensus       257 --~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         257 --SKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             --HHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence              11111111111111  22445666777788755543  8999999885

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.4e-35  Score=310.79  Aligned_cols=229  Identities=24%  Similarity=0.335  Sum_probs=187.6

Q ss_pred             ceeccCCceEEEEEEEC---CCCeEEEEEeccCC-----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++||+|+||.||++...   ..+..+|+|.+...     ......+.+|++++++++||||+++++++..++..|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            57999999999999863   45789999988652     22345678899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....    +.+..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..         
T Consensus        82 ~~~~~L~~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (323)
T cd05584          82 LSGGELFMHLEREGI----FMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG  154 (323)
T ss_pred             CCCchHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence            999999999976442    7888889999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    ...            .+....  
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----~~~------------~~~~~~--  216 (323)
T cd05584         155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----TID------------KILKGK--  216 (323)
T ss_pred             CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH----HHH------------HHHcCC--
Confidence               12358999999999998889999999999999999999999997643211    111            111111  


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ...+......+.+++..||+.+|++||     +++++++
T Consensus       217 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         217 LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            122333445678899999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=7.2e-35  Score=305.05  Aligned_cols=254  Identities=24%  Similarity=0.301  Sum_probs=196.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|+||.||++....++..+|+|.+...  ......+.+|++++.+++||||++++++|.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3688899999999999999999988999999987653  23345688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....    .+++..+..++.|+++||.|||+  ..+++||||||+|||++.++..++.|..         
T Consensus        81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (308)
T cd06615          81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  154 (308)
T ss_pred             cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence            99999999997653    38899999999999999999997  2589999999999999999999997732         


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc--------------
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE--------------  561 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~--------------  561 (645)
                       ....|+..|+|||.+.+..++.++||||||+++|||++|+.||...+... ..............              
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCCcccccCCCCCc
Confidence             22357889999999988889999999999999999999999986533111 00000000000000              


Q ss_pred             ---CchhHHhhhhcc---CCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          562 ---GRIIEAADKRLN---GAFNE-DEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       562 ---~~~~~~~d~~l~---~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                         ....+..+....   ...+. .....+.+++.+||+.+|++||++++|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               000111111110   01111 133458899999999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.3e-35  Score=309.80  Aligned_cols=234  Identities=24%  Similarity=0.355  Sum_probs=191.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +|...+.||+|+||.||+|....++..+|+|.+...    ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            477889999999999999999988999999988752    22334567788888877 5899999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|..++.....    +++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..       
T Consensus        81 E~~~~g~L~~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~  153 (323)
T cd05616          81 EYVNGGDLMYQIQQVGR----FKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW  153 (323)
T ss_pred             cCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence            99999999999876443    8899999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .+...+            ....
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~----~~~~~i------------~~~~  217 (323)
T cd05616         154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQSI------------MEHN  217 (323)
T ss_pred             CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH----HHHHHH------------HhCC
Confidence                 1235899999999999999999999999999999999999999764321    111111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSM-----RRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~~vl~  607 (645)
                        ..++......+.+++..|++.+|.+|++.     +++.+
T Consensus       218 --~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~  256 (323)
T cd05616         218 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  256 (323)
T ss_pred             --CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence              12233445667889999999999999984     56543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=6.5e-35  Score=295.85  Aligned_cols=238  Identities=27%  Similarity=0.360  Sum_probs=197.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|....++..+++|.+..... .+++.+|++++++++|+||+++++++...+..++++||++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            578888999999999999999988889999999876443 6789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +++|.+++.....   .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++..++.|..           
T Consensus        82 ~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          82 AGSVSDIMKITNK---TLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             CCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999999965432   48999999999999999999998   899999999999999999999997721           


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                       ....|+..|+|||.+.+..++.++||||||+++|||++|+.||............        ..     ...+.  ..
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~--------~~-----~~~~~--~~  220 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI--------PN-----KPPPT--LS  220 (256)
T ss_pred             cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh--------cc-----CCCCC--CC
Confidence             1234778999999999989999999999999999999999999754321110000        00     00000  11


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+......+.+++..||+.+|++|||+.++++
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            12234456888999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.7e-35  Score=309.50  Aligned_cols=228  Identities=24%  Similarity=0.333  Sum_probs=185.8

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|....++..||+|.++..    ......+..|..++..+ +|+||+++++++.+.+..|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999999999989999999988752    23345567788887764 899999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++.+...++.|+++||+|||+   .+|+||||||+|||++.++.+++.|..            
T Consensus        81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05620          81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA  153 (316)
T ss_pred             CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence            99999987643    28899999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||......    .+.+...          ...    ..+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~----~~~~~~~----------~~~----~~~  215 (316)
T cd05620         154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED----ELFESIR----------VDT----PHY  215 (316)
T ss_pred             eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHH----------hCC----CCC
Confidence            1235899999999999999999999999999999999999999754321    1111110          000    112


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMR-RVF  606 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-~vl  606 (645)
                      +......+.+++..||+.||++||++. +++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         216 PRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            222344567888999999999999984 565

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-34  Score=294.13  Aligned_cols=237  Identities=30%  Similarity=0.469  Sum_probs=196.5

Q ss_pred             ceeccCCceEEEEEEECCC---CeEEEEEeccCCcch--hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASS---GSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +.||+|+||.||+|.....   +..+++|.+......  .+.+.+|++++..++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4699999999999999865   889999998874433  67899999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCC-----CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          429 GSLDRMLYQDSEN-----GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       429 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ++|.+++......     ...+++.++..++.|+++||+|||+   .+++||||||+||+++.++..++.|.        
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999875221     2458999999999999999999999   99999999999999999999999872        


Q ss_pred             ------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          496 ------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                            .....++..|+|||.+....++.++||||+|++++||++ |+.||......    .+.+.             +
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~-------------~  220 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE----EVLEY-------------L  220 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH-------------H
Confidence                  112346788999999998899999999999999999999 69998764221    11111             1


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ........+......+.+++..||+.+|.+||++.++++.|+
T Consensus       221 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         221 RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            111112233444678889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=6.9e-35  Score=305.98  Aligned_cols=247  Identities=22%  Similarity=0.386  Sum_probs=196.8

Q ss_pred             cCCCcCceeccCCceEEEEEEEC-------CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA-------SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~-------~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      .+|...+.||+|+||.||++...       .....+|+|++...  .....++.+|+.++.++ +|+||++++++|...+
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            46778899999999999999753       23457899988753  23356788999999999 6999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..+++|||+++|+|.+++.....            ....++|.++..++.|++.||.|||+   .+++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence            99999999999999999976432            12358999999999999999999998   9999999999999999


Q ss_pred             CCCCeeeeccccc--------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhh
Q 041096          486 ANFNARLESSFTL--------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~~~~--------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~  550 (645)
                      .++..|+.|....              ..++..|+|||.+.+..++.++|||||||++|||++ |..||......    .
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----~  244 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE----E  244 (314)
T ss_pred             CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH----H
Confidence            9999999872211              112356999999998899999999999999999999 88888653211    1


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      +...             +........+......+.+++.+||+.+|++||++.++++.|++...
T Consensus       245 ~~~~-------------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         245 LFKL-------------LREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHH-------------HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            1111             11111112233445677889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=4.5e-35  Score=309.84  Aligned_cols=238  Identities=22%  Similarity=0.279  Sum_probs=189.9

Q ss_pred             CCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC-----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS-----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~  419 (645)
                      +|+..+.||+|+||.||++...   .++..+|+|++...     ....+.+..|+.++.++ +|+||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4778899999999999998863   46789999988652     22345678899999999 499999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++|+|.+++.....    +++.+...++.||+.||+|||+   .+|+||||||+|||++.++.++|.|..   
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~  153 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDN----FSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSK  153 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence            999999999999999976443    8999999999999999999999   999999999999999999999998732   


Q ss_pred             ----------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 ----------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                ....||..|+|||++.+. .++.++|||||||++|||++|+.||...........+....   .      
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~---~------  224 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI---L------  224 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH---h------
Confidence                      123589999999999865 47899999999999999999999997543222111111100   0      


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                       ..++    .++......+.+++..||+.||++||     +++++++
T Consensus       225 -~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         225 -KCDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             -cCCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence             0111    22233445677888999999999999     6777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=7.9e-35  Score=301.29  Aligned_cols=239  Identities=24%  Similarity=0.346  Sum_probs=193.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      |+..++||+|+||.||++....++..+|+|.+....    .....+.+|+.++++++|+|++.+++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667789999999999999999999999999876521    2234578899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++..++.|..         
T Consensus        82 ~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05630          82 MNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  156 (285)
T ss_pred             cCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence            999999999865432  238999999999999999999998   999999999999999999999997722         


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||++.+..++.++||||||+++|||++|+.||..............             .. .....
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~-------------~~-~~~~~  222 (285)
T cd05630         157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-------------LV-KEVQE  222 (285)
T ss_pred             cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh-------------hh-hhhhh
Confidence              123688999999999999999999999999999999999999976432111100000             00 00111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .++......+.+++..||+.||++|||     ++++++
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            122233456788899999999999999     888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=5.8e-35  Score=310.53  Aligned_cols=249  Identities=24%  Similarity=0.377  Sum_probs=193.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC-C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK-G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~  417 (645)
                      .++|+..+.||+|+||.||+|...     .++..||||+++..  ......+.+|+.++.++ +|+||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            357888999999999999999842     35678999998753  23345788999999999 689999999988654 4


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCC--------------------------------------------------------
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSEN--------------------------------------------------------  441 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~--------------------------------------------------------  441 (645)
                      ..++||||+++|+|.+++......                                                        
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            689999999999999998753210                                                        


Q ss_pred             -------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc--------------cc
Q 041096          442 -------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL--------------TA  500 (645)
Q Consensus       442 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~--------------~~  500 (645)
                             ...++|.++..++.|+++||+|||+   .+|+||||||+|||++.++.++++|....              ..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   1237889999999999999999998   99999999999999999999999873211              12


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      ++..|+|||.+.+..++.++||||||+++|||++ |..||.......   .+..             .+........+..
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~-------------~~~~~~~~~~~~~  306 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCR-------------RLKEGTRMRAPDY  306 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH---HHHH-------------HHhccCCCCCCCC
Confidence            3567999999998899999999999999999997 899986532211   1111             0111111111112


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          580 EMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ....+.+++..||+.+|++||++.++++.|+...+
T Consensus       307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            23467889999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5.4e-35  Score=296.97  Aligned_cols=240  Identities=31%  Similarity=0.449  Sum_probs=193.1

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhH---hHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~---~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |+..+.||+|+||+||++....++..+|+|++........   ...+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            4567899999999999999999999999999987544333   3456999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++....    .+++..+..++.|+++||+|||+   .+++|+||||+||+++.++..++.|..          
T Consensus        81 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~  153 (260)
T PF00069_consen   81 PGGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE  153 (260)
T ss_dssp             TTEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred             ccccccccccccc----ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            9999999998433    28999999999999999999999   999999999999999999999997722          


Q ss_pred             --cccccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 --TLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~-~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        ....++..|+|||++. ...++.++||||+|+++|||++|+.||...........+....         ........ 
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~-  223 (260)
T PF00069_consen  154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL---------KRPLPSSS-  223 (260)
T ss_dssp             EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH---------HTHHHHHT-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc---------cccccccc-
Confidence              1235788999999998 8889999999999999999999999998652111111111000         00000000 


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .........+.+++..||+.+|++||++.++++
T Consensus       224 -~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  224 -QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             -TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             -cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000011278889999999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.1e-34  Score=295.53  Aligned_cols=236  Identities=26%  Similarity=0.398  Sum_probs=185.6

Q ss_pred             ceeccCCceEEEEEEECC---CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeEEEEEecCC
Q 041096          354 RILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGELLLVYEYMP  427 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~~  427 (645)
                      +.||+|+||.||+|...+   ....+|+|++...  ....+.+.+|+.+++.++||||++++++|.. ++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998643   3467999987642  3345678899999999999999999998764 456899999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +|+|.+++.....   .+.+..++.++.|+++||+|||+   .+++||||||+|||++.++.+|++|...          
T Consensus        81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          81 HGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence            9999999976433   26888889999999999999998   9999999999999999999999977321          


Q ss_pred             ------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC-CCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          498 ------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACG-RRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       498 ------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG-~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ...++..|+|||.+....++.++|||||||++|||++| ..||.....    ..+...+..             
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~-------------  217 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS----FDITVYLLQ-------------  217 (262)
T ss_pred             eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHhc-------------
Confidence                  12345679999999988999999999999999999995 555543221    111111110             


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ......+...+..+.+++..||+.+|++||++.++++.|++.
T Consensus       218 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         218 GRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            001111223356788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.5e-34  Score=302.58  Aligned_cols=253  Identities=18%  Similarity=0.278  Sum_probs=192.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|...+.||+|+||.||+|+...++..+|+|.+...  ......+.+|++++++++|+||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            5688889999999999999999888999999988653  22345678999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      ++ ++|.+++.....   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+|+.|..         
T Consensus        86 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  158 (309)
T cd07872          86 LD-KDLKQYMDDCGN---IMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT  158 (309)
T ss_pred             CC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence            96 488888865432   37899999999999999999999   999999999999999999999998722         


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH-------HHhhhccCchh
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW-------VWGLYAEGRII  565 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~-------~~~~~~~~~~~  565 (645)
                         ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+....+...       .|.........
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07872         159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF  238 (309)
T ss_pred             cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence               12357889999998865 56899999999999999999999999765432211111110       00000000000


Q ss_pred             HHhh-hhccC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAAD-KRLNG----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d-~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+ +....    .........+.+++..|++.||.+|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0000 00000    000112345678999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.4e-34  Score=294.86  Aligned_cols=241  Identities=24%  Similarity=0.438  Sum_probs=196.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||.||++.... +..+++|.+.......+.+.+|++++++++|+||+++.+.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            3578888999999999999998754 5678999887655556789999999999999999999999887 7789999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++....  ...+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|...         
T Consensus        83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  157 (260)
T cd05073          83 AKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  157 (260)
T ss_pred             CCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence            9999999997643  2348899999999999999999998   8999999999999999999999987211         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...++..|+|||++....++.++|||||||+++|+++ |+.||......    .+..+.             ....
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~-------------~~~~  220 (260)
T cd05073         158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRAL-------------ERGY  220 (260)
T ss_pred             ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH-------------hCCC
Confidence                1123467999999998889999999999999999999 89998754321    111111             1111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ........+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       221 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         221 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            111223345678889999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.3e-35  Score=301.55  Aligned_cols=254  Identities=21%  Similarity=0.326  Sum_probs=194.5

Q ss_pred             cCCCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~  419 (645)
                      +.|...+.||+|+||.||++..    ..++..+|+|.+...  ......+.+|++++++++|+||+++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3467788999999999999985    345788999998653  33356799999999999999999999998875  568


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++++|.+++.+...   .++|.+++.++.|++.||+|||+   ++++||||||+||+++.++..++.|..   
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~  157 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKN---KINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTK  157 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccc
Confidence            999999999999999965432   38999999999999999999999   999999999999999999999997721   


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC--
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG--  562 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~--  562 (645)
                                  ....++..|+|||++.+..++.++||||||+++|||++++.|......     .............  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~-----~~~~~~~~~~~~~~~  232 (284)
T cd05079         158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT-----LFLKMIGPTHGQMTV  232 (284)
T ss_pred             ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc-----hhhhhcccccccccH
Confidence                        112356679999999988899999999999999999998876533110     0000000000000  


Q ss_pred             -chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          563 -RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       563 -~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       ...+.+...............+.+++.+||+.+|++||++.++++.|+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence             00111111111122233567899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=7.1e-35  Score=299.93  Aligned_cols=234  Identities=24%  Similarity=0.336  Sum_probs=193.4

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      |+..+.||+|+||.||+|.+..++..+|+|.+...  ....+.+.+|++++++++|+||+++++++..+...++||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567799999999999999888999999987653  3345678999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +++|.+++...     .+++..+..++.|+++||.|||+   ++++|+||+|+||+++.++..++.|...          
T Consensus        86 ~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06642          86 GGSALDLLKPG-----PLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence            99999998642     38899999999999999999998   9999999999999999999999977321          


Q ss_pred             --ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          498 --LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                        ...|+..|+|||++.+..++.++|||||||++|||++|+.|+........    ..             .+.......
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----~~-------------~~~~~~~~~  220 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV----LF-------------LIPKNSPPT  220 (277)
T ss_pred             hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH----Hh-------------hhhcCCCCC
Confidence              12477889999999998999999999999999999999999865322110    00             011111112


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ........+.+++..||+.+|.+||+|.++++.
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            233445678889999999999999999999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=8.5e-35  Score=312.76  Aligned_cols=247  Identities=21%  Similarity=0.266  Sum_probs=191.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-----eEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-----ELL  420 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~  420 (645)
                      +|+..+.||+|+||.||++....++..||+|++...   ....+.+.+|+++++.++|+||+++++++...+     ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999999888999999988653   223467889999999999999999999998776     789


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +|+||+. ++|.+++....    .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||.|..    
T Consensus        81 lv~e~~~-~~l~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             EEeeccc-cCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceee
Confidence            9999996 68888875433    38999999999999999999999   999999999999999999999998732    


Q ss_pred             ---------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch--
Q 041096          497 ---------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI--  564 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~--  564 (645)
                               ....++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+.    ........  
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~----~~~g~~~~~~  228 (372)
T cd07853         153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLIT----DLLGTPSLEA  228 (372)
T ss_pred             cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHH----HHcCCCCHHH
Confidence                     123568899999998874 47999999999999999999999997654321111111    11110000  


Q ss_pred             --------hHHhhhhc-cC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 --------IEAADKRL-NG-------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 --------~~~~d~~l-~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                              ...+.... ..       .........+.+++..|++.||++|||+.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                    00000000 00       111122456788999999999999999999987

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=7.6e-35  Score=307.56  Aligned_cols=231  Identities=25%  Similarity=0.325  Sum_probs=186.6

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|....++..+|+|++...    ....+.+.+|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999999998999999998763    23345688999999888 699999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++..+..++.|++.||+|||+   .+++||||||+|||++.++..|+.|..            
T Consensus        81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  153 (327)
T cd05617          81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT  153 (327)
T ss_pred             CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence            99999887543    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...++......        ...  ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~--------~~~--~~~  222 (327)
T cd05617         154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQVIL--------EKP--IRI  222 (327)
T ss_pred             ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-ccHHHHHHHHH--------hCC--CCC
Confidence            1235899999999999999999999999999999999999999753322111 11111111111        111  122


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                      +......+.+++..|++.||.+||++
T Consensus       223 p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         223 PRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            33334567788899999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.2e-34  Score=294.32  Aligned_cols=238  Identities=23%  Similarity=0.320  Sum_probs=195.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +|+..+.||+|+||.||++....++..+|+|.+..  .....+.+.+|+.+++.++|+||+++++.+..++..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            46778999999999999999998899999998754  2334567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++....  ...++....+.++.|++.||.|||+   .+++|+||||+||+++.++..++.|..          
T Consensus        81 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          81 DGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence            9999999986533  2347899999999999999999998   999999999999999999999987721          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||++.+..++.++||||||+++|||++|+.||......    ....   ... .         ....
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~~~~---~~~-~---------~~~~  218 (255)
T cd08219         156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK----NLIL---KVC-Q---------GSYK  218 (255)
T ss_pred             ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH----HHHH---HHh-c---------CCCC
Confidence              1235788899999999888999999999999999999999999753211    1110   000 0         0011


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ..+......+.+++.+||+.+|++||++.+++..
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            1223344567889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1e-35  Score=312.93  Aligned_cols=226  Identities=23%  Similarity=0.319  Sum_probs=184.8

Q ss_pred             ceeccCCceEEEEEEE---CCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          354 RILGRGAFGNVYKAYF---ASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~---~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +.||+|+||.||++..   ..++..+|+|++....   .....+..|++++++++||||+++++++.+.+..|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999876   3468899999887522   234567789999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +|+|.+++.+..    .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++..++.|..           
T Consensus        82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~  154 (318)
T cd05582          82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  154 (318)
T ss_pred             CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence            999999996543    38999999999999999999999   999999999999999999999998732           


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                       ....||..|+|||.+.+..++.++|||||||++|||++|+.||......    ......            ....  ..
T Consensus       155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~----~~~~~i------------~~~~--~~  216 (318)
T cd05582         155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK----ETMTMI------------LKAK--LG  216 (318)
T ss_pred             eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH----HHHHHH------------HcCC--CC
Confidence             1235789999999999888999999999999999999999999754321    111110            0011  12


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      .+......+.+++..||+.||++||++.+
T Consensus       217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         217 MPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            23334456778889999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-34  Score=298.57  Aligned_cols=243  Identities=25%  Similarity=0.410  Sum_probs=195.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .+|+..+.||+|+||.||+|....++.    .+|+|......  ....++.+|+.++++++|+||++++++|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            456778899999999999999866554    58999877643  345678999999999999999999999987 78999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---  498 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~---  498 (645)
                      |+||+++|+|.+++.....   .+++..++.++.|++.||+|||+   ++++||||||+||+++.++.+++.|....   
T Consensus        86 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             EEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence            9999999999999976543   38999999999999999999999   99999999999999999999999773211   


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ..++..|+|||.+....++.++||||||+++||+++ |+.||......    .+..             
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~-------------  222 (279)
T cd05057         160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV----EIPD-------------  222 (279)
T ss_pred             cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH----HHHH-------------
Confidence                       112457999999988899999999999999999998 99998764321    1111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+........+..+...+.+++..||..+|.+||++.++++.|+....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         223 LLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            111111111222234567888999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1e-34  Score=299.40  Aligned_cols=249  Identities=23%  Similarity=0.347  Sum_probs=200.6

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeee-
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAE-  415 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~-  415 (645)
                      .++.++..+.+.|+..+.||+|+||.||+|....++..+|+|..........++..|+.++.++ +|+||+++++++.. 
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4566777788899999999999999999999988899999999877655567788999999998 69999999999853 


Q ss_pred             -----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          416 -----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       416 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                           .+..+++|||+++|+|.+++.....  ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++..
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~  160 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEV  160 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCE
Confidence                 4578999999999999999976432  247888899999999999999999   999999999999999999999


Q ss_pred             eeeccc------------cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          491 RLESSF------------TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       491 kl~d~~------------~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                      ++.|..            ....|+..|+|||.+.     ...++.++|||||||++|||++|+.||..........    
T Consensus       161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~----  236 (282)
T cd06636         161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF----  236 (282)
T ss_pred             EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh----
Confidence            998731            1235788999999886     3467889999999999999999999996532211100    


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                  ..................+.+++..||+.+|.+||++.++++
T Consensus       237 ------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         237 ------------LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ------------hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence                        000000011111234567889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.4e-34  Score=294.36  Aligned_cols=243  Identities=26%  Similarity=0.366  Sum_probs=198.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~  423 (645)
                      +|+..+.||+|+||.||++....++..+|+|.+...   ....+.+..|++++++++|+||+++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            467788999999999999999888999999987642   3345678899999999999999999998754  45689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeeCCCCCCcEEEcCCCCeeeecc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC--EQQVIHRDIKASNIMLDANFNARLESS------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NIlld~~~~~kl~d~------  495 (645)
                      ||+++++|.+++.........+++..++.++.|++.||+|||..+  ..+++|+||||+||+++.++..++.|.      
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999999765444456999999999999999999999321  289999999999999999999999772      


Q ss_pred             ------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 ------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            .....|+..|+|||.+....++.++||||||+++|||++|+.||.....    ..+..             .+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~-------------~~~  223 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----LQLAS-------------KIK  223 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH----HHHHH-------------HHh
Confidence                  2234678899999999988899999999999999999999999976431    11111             111


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .......+......+.+++..|++.+|++||++++|++.
T Consensus       224 ~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         224 EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            111223444556788999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=8.5e-35  Score=322.05  Aligned_cols=261  Identities=19%  Similarity=0.245  Sum_probs=193.5

Q ss_pred             HHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCC------CeeeeeeeeeeC
Q 041096          343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK------NLVQLLGWCAEK  416 (645)
Q Consensus       343 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~------niv~l~g~~~~~  416 (645)
                      +...+++|+..++||+|+||+||+|.+...+..||||+++.......++..|+.++..++|.      +++++++++...
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            33456889999999999999999999988899999999876444455667788888777654      588899988764


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC------
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN------  489 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~------  489 (645)
                       ...|+|||++ +++|.+++.+..    .+++..+..|+.||+.||+|||+  ..+|+||||||+||||+.++.      
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCccccccc
Confidence             5789999998 788999887643    38999999999999999999997  149999999999999987653      


Q ss_pred             ----------eeeeccc---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhh
Q 041096          490 ----------ARLESSF---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN  550 (645)
Q Consensus       490 ----------~kl~d~~---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~  550 (645)
                                .||.|..         ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~-~  355 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHL-H  355 (467)
T ss_pred             ccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-H
Confidence                      7787632         2347899999999999999999999999999999999999999764432111 1


Q ss_pred             HHHHHHhhh--------ccCchhHHhhhh--ccCCCC---------------HHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 041096          551 LVDWVWGLY--------AEGRIIEAADKR--LNGAFN---------------EDEMKRLLLVGLSCANPDSSARPSMRRV  605 (645)
Q Consensus       551 l~~~~~~~~--------~~~~~~~~~d~~--l~~~~~---------------~~~~~~l~~l~~~Cl~~dP~~RPt~~~v  605 (645)
                      ++....+..        ......+..+..  +.....               ......+++++..||+.||++|||++|+
T Consensus       356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~  435 (467)
T PTZ00284        356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM  435 (467)
T ss_pred             HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence            111110000        000000000000  000000               0113457799999999999999999999


Q ss_pred             HH--HHcC
Q 041096          606 FQ--ILNN  611 (645)
Q Consensus       606 l~--~L~~  611 (645)
                      ++  +|.+
T Consensus       436 L~Hp~~~~  443 (467)
T PTZ00284        436 TTHPYVLK  443 (467)
T ss_pred             hcCccccc
Confidence            97  4554

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.7e-34  Score=295.67  Aligned_cols=235  Identities=23%  Similarity=0.349  Sum_probs=196.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .|+..+.||+|+||.||+|....++..+|+|.+...  ......+.+|+.++++++|+||+++++.+.++...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            456678899999999999999888999999987653  344567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++...     .+++.+...++.|++.||+|||+   .+++|+||+|+||+++.++..++.|..          
T Consensus        85 ~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          85 GGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999998642     28889999999999999999998   999999999999999999999997721          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....++..|+|||++.+..++.++|||||||++|||++|..||.......    ..             .........
T Consensus       157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~-------------~~~~~~~~~  219 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----VL-------------FLIPKNNPP  219 (277)
T ss_pred             ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----Hh-------------hhhhcCCCC
Confidence              12346788999999998889999999999999999999999987543211    00             011111122


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ......+..+.+++..||+.+|++||+++++++.
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            3445567788899999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=296.57  Aligned_cols=235  Identities=26%  Similarity=0.346  Sum_probs=195.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||.|++|.||+|....++..+|+|.+...  ......+.+|++++++++|+|++++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3577788999999999999999988999999988653  33456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++...     .+++.....++.|++.||.|||+   .+++||||+|+||+++.++..++.|..         
T Consensus        81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            9999999999754     38999999999999999999998   999999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....++..|+|||++.+..++.++||||||+++|||++|+.||.......    ...             .+.....
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~----~~~-------------~~~~~~~  215 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR----VLF-------------LIPKNNP  215 (274)
T ss_pred             cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH----HHH-------------HhhhcCC
Confidence               22357788999999998889999999999999999999999997543211    000             0001111


Q ss_pred             CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNED-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...... ....+.+++..||+.+|++|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         216 PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            111111 4456788899999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=5.1e-35  Score=314.16  Aligned_cols=247  Identities=23%  Similarity=0.287  Sum_probs=194.6

Q ss_pred             HHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          340 YRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       340 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      ++++....++|+..+.||+|+||.||++....++..+|+|.+..    .....+.+.+|+.+++.++||||+++++++.+
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            45566667899999999999999999999999999999998764    22334567899999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ++..++||||+++|+|.+++....     ++...+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|.
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~Df  186 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF  186 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeC
Confidence            999999999999999999986532     7888889999999999999999   99999999999999999999999873


Q ss_pred             c-------------cccccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 F-------------TLTAGTMGYLAPEYLQYG----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ~-------------~~~~gt~~y~APE~~~~~----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .             ....||+.|+|||++...    .++.++|||||||++|||++|+.||...+....    ...   .
T Consensus       187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~---i  259 (371)
T cd05622         187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSK---I  259 (371)
T ss_pred             CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH----HHH---H
Confidence            1             134589999999998754    378999999999999999999999976432111    110   0


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA--RPSMRRVFQI  608 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~~  608 (645)
                      ....       ..+.-....+....+.+++..|+..++.+  ||+++++++.
T Consensus       260 ~~~~-------~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         260 MNHK-------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             HcCC-------CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            0000       00100111123455677778898744443  7899998874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=6.2e-35  Score=301.37  Aligned_cols=253  Identities=22%  Similarity=0.294  Sum_probs=193.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..++||+|+||.||+|....++..+|+|++....   ...+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            36788899999999999999998889999999876532   234578899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.++.....    .++|.+++.++.|+++||+|||+   .+++|+||+|+||++++++.+++.|..        
T Consensus        81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07846          81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  153 (286)
T ss_pred             cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence            999999988765432    28999999999999999999999   899999999999999999999997721        


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc-h---hHH
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR-I---IEA  567 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~-~---~~~  567 (645)
                          ....++..|+|||++.+ ..++.++||||||+++|||++|+.||...........+..+......... .   ...
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07846         154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL  233 (286)
T ss_pred             ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence                12347788999999875 45788999999999999999999998754322111111111111100000 0   000


Q ss_pred             hhhhccCC---------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLNGA---------FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+......         ........+.+++..||+.+|++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            00000000         01123567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-36  Score=323.03  Aligned_cols=242  Identities=26%  Similarity=0.409  Sum_probs=204.5

Q ss_pred             CcCceeccCCceEEEEEEECCCC----eEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          351 HSNRILGRGAFGNVYKAYFASSG----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~----~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +..++||+|+||+||+|.+-..+    .+||+|.+..  ..+...++++|+.+|.+|+||||++|+|+|..+. +.||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            34678999999999999985433    4788998776  3445789999999999999999999999998876 899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |||.|+|.+|++.++..   +.-+..+.+..|||+||.|||+   ++++||||.++||||.+-..+|+.|...       
T Consensus       778 ~mP~G~LlDyvr~hr~~---igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDN---IGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             hcccchHHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            99999999999987654   8889999999999999999998   9999999999999999888888866221       


Q ss_pred             -----ccc--cCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          498 -----LTA--GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       498 -----~~~--gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           ...  -.+.|||-|.+..+.|+.++|||||||.+||++| |..|+++....                 ++.+.+.
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-----------------eI~dlle  914 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-----------------EIPDLLE  914 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-----------------HhhHHHh
Confidence                 111  2457999999999999999999999999999999 99999875421                 2333444


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ...+...++.+...++.++..||..|+..||+++++...+.+.+..|
T Consensus       915 ~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp  961 (1177)
T KOG1025|consen  915 KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP  961 (1177)
T ss_pred             ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence            44445677888899999999999999999999999999988776555

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.5e-34  Score=296.90  Aligned_cols=245  Identities=25%  Similarity=0.403  Sum_probs=196.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|+.+.     ....+++|.+.....  ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            467888999999999999999753     346789998766333  3568999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCC-----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENG-----VLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      +||||+++|+|.+++.......     ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++++.
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999997654221     248999999999999999999998   89999999999999999999988762


Q ss_pred             c-------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhcc
Q 041096          496 F-------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       496 ~-------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                      .             ....++..|+|||.+.+..++.++||||||+++|||++ |..||......    .+....    ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~----~~~~~~----~~  233 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE----EVLNRL----QA  233 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----HHHHHH----Hc
Confidence            1             12245667999999988889999999999999999999 78888643221    111111    00


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                              ..+....+...+..+.+++.+||+.+|.+||++.++++.|.+
T Consensus       234 --------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         234 --------GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             --------CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence                    111111222345678899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.6e-34  Score=299.01  Aligned_cols=239  Identities=24%  Similarity=0.310  Sum_probs=192.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      |+..+.||+|+||+||+|....++..+|+|.+....    .....+.+|++++++++|+|++.+.+.+..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            566788999999999999999889999999886532    2344578899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....  ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+++.|..         
T Consensus        82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE  156 (285)
T ss_pred             ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence            999999998865432  248999999999999999999998   999999999999999999999998722         


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||++.+..++.++|||||||++|||++|+.||...........+    ..         .+... ..
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~----~~---------~~~~~-~~  222 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV----DR---------RVLET-EE  222 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HH---------hhhcc-cc
Confidence              1235789999999999899999999999999999999999999754321111000    00         00000 01


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .+.......+.+++..|++.+|++||+     ++++++
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            122334456788889999999999999     666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-34  Score=308.58  Aligned_cols=182  Identities=24%  Similarity=0.299  Sum_probs=160.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ...+|...+.||+|+||.||+|....++..||+|.....     ....|+.++++++|+||+++++++...+..++|+||
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            346799999999999999999999988899999975432     245799999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      + .++|.+++.....   .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+++.|...        
T Consensus       139 ~-~~~l~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  211 (357)
T PHA03209        139 Y-SSDLYTYLTKRSR---PLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP  211 (357)
T ss_pred             c-CCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence            9 5789998865433   48999999999999999999999   9999999999999999999999987321        


Q ss_pred             ---ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCC
Q 041096          498 ---LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI  539 (645)
Q Consensus       498 ---~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~  539 (645)
                         ...||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence               235889999999999999999999999999999999866554

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.8e-34  Score=297.69  Aligned_cols=237  Identities=26%  Similarity=0.336  Sum_probs=191.3

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      |+..+.||+|+||.||+|....++..+++|.+... ....+.+.+|+++++.++|+|++++++++..++..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            34567899999999999999988999999988763 34466789999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      ++|..++.+...   .+++..+..++.|+++||+|||+   .+++||||||+||+++.++..++.|..            
T Consensus        87 ~~l~~~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~  160 (282)
T cd06643          87 GAVDAVMLELER---PLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  160 (282)
T ss_pred             CcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence            999998865332   48999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                      ....++..|+|||++.     ...++.++|||||||++|||++|+.||.......   ........          ..+.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~~~~~~----------~~~~  227 (282)
T cd06643         161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR---VLLKIAKS----------EPPT  227 (282)
T ss_pred             ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH---HHHHHhhc----------CCCC
Confidence            2235788999999984     3457889999999999999999999987543211   11110000          0000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +  ..+......+.+++..||+.+|.+||++.++++
T Consensus       228 ~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         228 L--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             C--CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0  112233456788999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.7e-34  Score=293.33  Aligned_cols=231  Identities=28%  Similarity=0.471  Sum_probs=185.7

Q ss_pred             ceeccCCceEEEEEEECCCC----------eEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          354 RILGRGAFGNVYKAYFASSG----------SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~----------~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.||+|+||.||+|.+...+          ..+++|...........|.+|+.++++++|+||++++++|.. ...++||
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            46999999999999997665          357888776644447789999999999999999999999988 7789999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-------Ceeeeccc
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-------NARLESSF  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-------~~kl~d~~  496 (645)
                      ||+++|+|.+++.....   .+++..++.++.|++.||+|||+   ++++||||||+|||++.++       ..+++|..
T Consensus        80 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          80 EYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence            99999999999986543   38999999999999999999998   9999999999999999887       67887732


Q ss_pred             c--------ccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 T--------LTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 ~--------~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                      .        ...++..|+|||++...  .++.++||||||+++|||++ |..|+........    ..+    +.     
T Consensus       154 ~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~----~~~----~~-----  220 (259)
T cd05037         154 IPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK----ERF----YQ-----  220 (259)
T ss_pred             cccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH----HHH----Hh-----
Confidence            1        23467889999999876  78999999999999999999 5777755431110    000    00     


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                         ..   ...+......+.+++..||..+|.+|||+.++++.|+
T Consensus       221 ---~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         221 ---DQ---HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             ---cC---CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence               00   0011111267889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.3e-35  Score=311.00  Aligned_cols=225  Identities=25%  Similarity=0.328  Sum_probs=182.5

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHH-HHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELS-IIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||+||+|....++..||+|++...    ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4699999999999999989999999998652    222344555555 46789999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++.....++.||+.||+|||+   .+|+||||||+|||++.++..|+.|..            
T Consensus        81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  153 (323)
T cd05575          81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT  153 (323)
T ss_pred             CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence            99999997643    38899999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    +.+.            .....+  ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~------------i~~~~~--~~  215 (323)
T cd05575         154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----MYDN------------ILNKPL--RL  215 (323)
T ss_pred             ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----HHHH------------HHcCCC--CC
Confidence            12358999999999999999999999999999999999999997543211    1110            011111  11


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMR  603 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~  603 (645)
                      +......+.+++..|++.+|.+||+++
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         216 KPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            223355678888999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.5e-34  Score=296.12  Aligned_cols=241  Identities=25%  Similarity=0.344  Sum_probs=184.3

Q ss_pred             ceeccCCceEEEEEEECC--CCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          354 RILGRGAFGNVYKAYFAS--SGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      +.||+|+||.||+|....  ++..+|+|.+....  .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            358999999999998653  34678999876532  33457899999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCC-CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          430 SLDRMLYQDSE-NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       430 sL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      +|.+++..... ....+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..            
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            99999976432 22346788888999999999999999   999999999999999999999998732            


Q ss_pred             --cccccCCcccCcccccCC-------CCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 --TLTAGTMGYLAPEYLQYG-------TATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~-------~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                        ....++..|+|||++...       .++.++||||||+++|||++ |+.||......+.    .....    .+....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~----~~~~~----~~~~~~  229 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV----LTYTV----REQQLK  229 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH----HHHHh----hcccCC
Confidence              112456789999988642       35789999999999999996 9999975432211    11100    001111


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ..++.+    .......+.+++..|| .+|++|||+++|++.|+
T Consensus       230 ~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         230 LPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            111111    1122345677888999 58999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.1e-34  Score=302.79  Aligned_cols=244  Identities=25%  Similarity=0.432  Sum_probs=193.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..+.||+|+||.||+|....++.    .+|+|.+....  ....++.+|+.++++++|+||++++|+|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            467778899999999999999866554    46888876532  2244788999999999999999999999754 5689


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----  497 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----  497 (645)
                      ++||+++|+|.+++.....   .+++..++.++.|++.||+|||+   ++++||||||+||+++.++.+|++|...    
T Consensus        86 v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             eehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccc
Confidence            9999999999999876432   38999999999999999999998   9999999999999999999999987211    


Q ss_pred             ----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 ----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 ----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ...++..|+|||.+.+..++.++|||||||++|||++ |+.||.....    ..+.++.           
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~----~~~~~~~-----------  224 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT----REIPDLL-----------  224 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH-----------
Confidence                      1224568999999998999999999999999999997 8999865321    1111111           


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                        ........+..+...+.+++..||..+|++||+++++++.|+.....
T Consensus       225 --~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         225 --EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             --HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence              11111111222345678899999999999999999999999876443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.5e-34  Score=306.10  Aligned_cols=247  Identities=23%  Similarity=0.375  Sum_probs=197.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-------CCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-------SGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      .+|...+.||+|+||.||++....       .+..+|+|.....  ....+++.+|++++.++ +|+||++++++|...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            457888999999999999997532       2346899987753  33456899999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..++++||+++|+|.+++.....            ....++|.+++.++.|++.||+|||+   .+++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence            99999999999999999976431            12348999999999999999999998   9999999999999999


Q ss_pred             CCCCeeeeccccc--------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhh
Q 041096          486 ANFNARLESSFTL--------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~~~~--------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~  550 (645)
                      .++..|+.|....              ..++..|+|||.+.+..++.++||||||+++|||++ |..||......    .
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~  244 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE----E  244 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH----H
Confidence            9999999873211              123457999999999999999999999999999998 88888653211    1


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      +..             .+........+......+.+++..||+.+|.+||+|.++++.|+....
T Consensus       245 ~~~-------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         245 LFK-------------LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHH-------------HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            111             111111112233445678899999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-35  Score=322.42  Aligned_cols=245  Identities=24%  Similarity=0.300  Sum_probs=201.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcC-CCCeeeeeee-eee------CCeE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLR-HKNLVQLLGW-CAE------KGEL  419 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~-~~~------~~~~  419 (645)
                      +.++.++|.+|||+.||.+.+...+..+|+|++-. .....+...+||++|++|+ |+|||.+++. ...      .-+.
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev  117 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV  117 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence            44567889999999999999988779999998655 5666788999999999997 9999999993 221      1378


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc-
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-  498 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~-  498 (645)
                      +|+||||++|+|-+++..+...+  |+..++++|+.|+|+|+++||. +.++|||||||-+||||+.++.-||+|.... 
T Consensus       118 llLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  118 LLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             EeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            99999999999999998765543  9999999999999999999997 4678999999999999999999999883322 


Q ss_pred             --------------------cccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH
Q 041096          499 --------------------TAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       499 --------------------~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~  555 (645)
                                          ..-|+.|+|||.+.   +...++|+|||++||+||-||....||+.....          
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------  264 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------  264 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------
Confidence                                13589999999764   567899999999999999999999999864221          


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                                .++.....-.-.......+..||..||+++|.+||++.+|++.+..++..+
T Consensus       265 ----------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  265 ----------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             ----------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence                      111222211222467888999999999999999999999999887665444

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.5e-34  Score=294.27  Aligned_cols=245  Identities=25%  Similarity=0.365  Sum_probs=194.4

Q ss_pred             CCCcCceeccCCceEEEEEEECC-CCeEEEEEeccCC-----------cchhHhHHHHHHHHhh-cCCCCeeeeeeeeee
Q 041096          349 GFHSNRILGRGAFGNVYKAYFAS-SGSVAAVKRSKHS-----------HEGKTEFLAELSIIAC-LRHKNLVQLLGWCAE  415 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~~-----------~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~  415 (645)
                      +|+..+.||+|+||.||+|.... .+..+|+|.+...           .....++..|+.++.+ ++|+||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46778899999999999999977 6788999976531           1223457788888875 799999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ++..+++|||+++++|.+++.........+++..++.++.|++.||.|||+  ..+++|+||||+||+++.++.+++.|.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence            999999999999999999986533333458999999999999999999995  267999999999999999999999872


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .           ....|+..|+|||.+.+..++.++||||||+++|||++|+.||......    .....          
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----~~~~~----------  224 (269)
T cd08528         159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----SLATK----------  224 (269)
T ss_pred             cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH----HHHHH----------
Confidence            2           2345788999999999888999999999999999999999998643211    11110          


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                        ..+..............+.+++.+||+.||++||++.|+.++|++
T Consensus       225 --~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         225 --IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             --HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence              001111111111234568889999999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.7e-34  Score=295.72  Aligned_cols=240  Identities=26%  Similarity=0.362  Sum_probs=182.9

Q ss_pred             eeccCCceEEEEEEECC--CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          355 ILGRGAFGNVYKAYFAS--SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .||+|+||.||+|....  ....+++|.+...  ......+.+|+++++.++|+||++++++|.+....++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997643  3457888877643  3345678999999999999999999999999999999999999999


Q ss_pred             HhHHhhhcCCC-CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------------
Q 041096          431 LDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------  497 (645)
Q Consensus       431 L~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------------  497 (645)
                      |.+++...... ....++...+.++.|++.||+|||+   ++|+||||||+|||++.++..|+.|...            
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            99999765432 2235788889999999999999999   9999999999999999999999987321            


Q ss_pred             --ccccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          498 --LTAGTMGYLAPEYLQY-------GTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~-------~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                        ...++..|+|||++..       ..++.++|||||||++|||++ |+.||.......    .....   ... .....
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~~~---~~~-~~~~~  230 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ----VLKQV---VRE-QDIKL  230 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH----HHHHH---hhc-cCccC
Confidence              1134567999998743       356889999999999999999 788886543211    11110   000 00111


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      .++    ..+......+.+++..|| .||++|||+++|++.|.
T Consensus       231 ~~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         231 PKP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            111    122334456667778898 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=296.92  Aligned_cols=245  Identities=27%  Similarity=0.370  Sum_probs=197.7

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC------
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG------  417 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~------  417 (645)
                      .++++|+..+.||+|++|.||+|....++..+++|.+.......+.+.+|+++++++ +|+||+++++++.+..      
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            356889999999999999999999988889999999887666667899999999999 6999999999997644      


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++||||+++++|.+++.........+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++..++.|.. 
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999999987644333458999999999999999999998   999999999999999999999997732 


Q ss_pred             -----------cccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          497 -----------TLTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                                 ....|+..|+|||.+..     ..++.++|||||||+++||++|+.||.......   .+....     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~-----  231 (275)
T cd06608         160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR---ALFKIP-----  231 (275)
T ss_pred             ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH---HHHHhh-----
Confidence                       22357888999998753     346889999999999999999999996532211   111100     


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..     ..+.+  ..+......+.+++.+||..||++|||+.++++
T Consensus       232 ~~-----~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         232 RN-----PPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cc-----CCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            00     00011  112234567889999999999999999999985

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-35  Score=314.99  Aligned_cols=233  Identities=23%  Similarity=0.336  Sum_probs=199.6

Q ss_pred             cCceeccCCceEEEEEEECCC---CeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          352 SNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ..++||+|.||.|++|.+...   ...||||+++....  ...+|++|+.+|.+|+|+|+++|||...+ ...+||+|++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            357899999999999999653   24689999987433  56789999999999999999999999988 7899999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccccc-------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------  499 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~-------  499 (645)
                      +.|||.+.|++..  ...|.......++.|||.||+||.+   +++|||||.++|+||-..-.+||+|..-+.       
T Consensus       193 plGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             ccchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            9999999998732  3347888899999999999999999   999999999999999999999998832221       


Q ss_pred             --------ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          500 --------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       500 --------~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                              .-...|+|||.+..++++.+||||+|||.+|||++ |..||-+....                 .+.+.+|.
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----------------qIL~~iD~  330 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----------------QILKNIDA  330 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----------------HHHHhccc
Confidence                    12456999999999999999999999999999999 88898775431                 23455666


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +-+...++.|.+.++++++.||..+|++|||+..+.+
T Consensus       331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            5566778899999999999999999999999999974

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.8e-34  Score=298.18  Aligned_cols=245  Identities=26%  Similarity=0.354  Sum_probs=197.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|+||+||++....++..+|+|.....  ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4567778999999999999999888999999987653  33457899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....    .+++.....++.+++.||.|||+  ..+++||||||+||+++.++.+++.|..         
T Consensus        85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~  158 (284)
T cd06620          85 MDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI  158 (284)
T ss_pred             CCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence            99999999986543    38999999999999999999996  2589999999999999999999997732         


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccccc----chhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH----KMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                       ....|+..|+|||++.+..++.++|||||||++|||++|+.||.......    ....+.++...         .....
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  229 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ---------IVQEP  229 (284)
T ss_pred             cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH---------Hhhcc
Confidence             12368899999999988899999999999999999999999997643211    11111111111         11111


Q ss_pred             ccCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          572 LNGAFN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       572 l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      . ...+ .+.+..+.+++..||+.+|.+|||+.|++++
T Consensus       230 ~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         230 P-PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             C-CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            1 1111 1245678889999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.5e-34  Score=292.07  Aligned_cols=235  Identities=26%  Similarity=0.365  Sum_probs=191.6

Q ss_pred             ceeccCCceEEEEEEECC-CC--eEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFAS-SG--SVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~-~~--~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|++|.||+|.+.. ++  ..+|+|.+....  ...+.+.+|+.++++++|+||+++++.+.+ ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999999854 23  368999987743  356789999999999999999999999988 889999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      ++|.+++.+...  ..++|.....++.|++.||+|||+   .+++||||||+||+++.++..|+.|..            
T Consensus        80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            999999976542  348999999999999999999999   999999999999999999999998721            


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+    .......            ...
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~~~~~------------~~~  218 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ----ILKKIDK------------EGE  218 (257)
T ss_pred             ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHh------------cCC
Confidence               11245678999999999999999999999999999998 999986543211    1111100            000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ....+...+..+.+++..||+.+|++||++.++++.|.
T Consensus       219 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         219 RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11122334567889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.5e-34  Score=298.35  Aligned_cols=254  Identities=19%  Similarity=0.272  Sum_probs=191.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|++|.||+|+...++..||+|.+...   ......+.+|+.++.+++|+||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            467788999999999999999888999999987653   22346788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      ++ ++|.+++..... ...+++.++..++.|+++||+|||+   .+++||||||+||+++.++.+++.|..         
T Consensus        81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            96 689888865432 2358999999999999999999998   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh----hhccCchhHHh
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG----LYAEGRIIEAA  568 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~  568 (645)
                         ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..................    .+.........
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY  235 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence               12346789999998865 45789999999999999999999999764322111111110000    00000000000


Q ss_pred             hhhccC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNG-------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+....       .........+.+++..||+.||++|||+++|++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000000       001112356678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.4e-34  Score=291.99  Aligned_cols=237  Identities=23%  Similarity=0.334  Sum_probs=195.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.+|++....++..+++|++...   ....+++.+|+.++++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477889999999999999999888999999987642   33456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....  ..+++.+.+.++.|++.||+|||+   .+++|+||+|+|||++.++.+++.|..         
T Consensus        81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence            999999999875432  237899999999999999999998   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||++.++.++.++|||||||+++||++|+.||......    ..   +..         .... ..
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~----~~---~~~---------~~~~-~~  218 (256)
T cd08218         156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK----NL---VLK---------IIRG-SY  218 (256)
T ss_pred             hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH----HH---HHH---------HhcC-CC
Confidence               1234788899999999999999999999999999999999998653211    11   100         0000 01


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+......+.+++.+||+.+|.+||+|++|++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            1223344567889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=3.4e-34  Score=290.91  Aligned_cols=238  Identities=24%  Similarity=0.330  Sum_probs=197.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.||.+....++..+++|.+...   ....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999999999888999999987642   34456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....  ...+++.++..++.|++.||+|||+   .+++|+||||+||+++.++.+|+.|..         
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence            99999999997653  2348999999999999999999998   899999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||.+.+..++.++||||||+++|||++|+.||.......    ...   .         ...... 
T Consensus       156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----~~~---~---------~~~~~~-  218 (256)
T cd08221         156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN----LVV---K---------IVQGNY-  218 (256)
T ss_pred             ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH----HHH---H---------HHcCCC-
Confidence               22457899999999998889999999999999999999999996532211    111   0         000011 


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...+......+.+++..||+.+|.+||+++++++.
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         219 TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            11123345668889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-35  Score=313.56  Aligned_cols=231  Identities=25%  Similarity=0.364  Sum_probs=196.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~  420 (645)
                      ..++|...++||+|.||+|+++.++.+++.+|||.+++.    +.+.+..+.|-+++... +||.|++|+.++...+++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            456899999999999999999999999999999999883    44566678888887777 5999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------  494 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------  494 (645)
                      .||||+.||++..+.+..     .++...+.-++..|+.||+|||+   ++||+||||.+|||||.+|-+||.|      
T Consensus       446 fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             EEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence            999999999954444322     28999999999999999999999   9999999999999999999999977      


Q ss_pred             ------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          495 ------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       495 ------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                            ..+..+||+.|||||++.++.|+..+|+|||||+||||+.|..||.+.++++....++.               
T Consensus       518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~---------------  582 (694)
T KOG0694|consen  518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN---------------  582 (694)
T ss_pred             cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc---------------
Confidence                  34556899999999999999999999999999999999999999997655332222110               


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                      |.   ..++.....+...|+...+..+|++|.-+
T Consensus       583 d~---~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  583 DE---VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CC---CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            11   13555667778888899999999999876

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.2e-34  Score=305.61  Aligned_cols=229  Identities=24%  Similarity=0.345  Sum_probs=188.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +|+..+.||+|+||.||+|....++..||+|++...    ....+.+..|..++..+. |++|+++.+++.+.+..|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467789999999999999999988999999988752    233456788999998886 577888999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|..++.....    +++.++..++.|++.||+|||+   .+++||||||+|||++.++.+++.|..       
T Consensus        81 Ey~~~g~L~~~i~~~~~----l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~  153 (323)
T cd05615          81 EYVNGGDLMYHIQQVGK----FKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV  153 (323)
T ss_pred             cCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence            99999999999876433    8999999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .+...+            ....
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i------------~~~~  217 (323)
T cd05615         154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED----ELFQSI------------MEHN  217 (323)
T ss_pred             CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH------------HhCC
Confidence                 1234899999999999989999999999999999999999999764321    111111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                        ..++......+.+++..|++.+|.+|++.
T Consensus       218 --~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         218 --VSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             --CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence              12233344567888899999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=4.5e-34  Score=290.06  Aligned_cols=238  Identities=22%  Similarity=0.340  Sum_probs=194.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E  424 (645)
                      +|+..+.||+|++|.||++....++..+|+|.+...   ....+.+.+|++++++++|+|++++++.+.. +...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            477889999999999999999888899999988652   2345678899999999999999999998764 446899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++....  ...+++.++..++.|++.|++|||+   .+++||||||+||+++.++..++.|..        
T Consensus        81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence            999999999997643  2348999999999999999999999   999999999999999999999997721        


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....+++.|+|||.+.+..++.++||||||++++||++|+.||...+..       .......          ...
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-------~~~~~~~----------~~~  218 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-------SLVYRII----------EGK  218 (257)
T ss_pred             CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHH----------hcC
Confidence                1235788999999999999999999999999999999999998753211       1110100          011


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ....+......+.+++..|++.+|++||++.++++.
T Consensus       219 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         219 LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            112333455678899999999999999999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.5e-34  Score=299.05  Aligned_cols=252  Identities=23%  Similarity=0.273  Sum_probs=188.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhc---CCCCeeeeeeeeee-----CC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACL---RHKNLVQLLGWCAE-----KG  417 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~-----~~  417 (645)
                      +|+..+.||+|+||.||+|....++..+|+|.+....   .....+.+|+++++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999999999999999876522   2234566777777665   69999999998764     24


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++||||++ ++|.+++.....  ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++..|+.|.. 
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCc
Confidence            5899999997 589988875432  238999999999999999999999   999999999999999999999998731 


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ....||..|+|||++.+..++.++|||||||++|||++|+.||...........+..... .........
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~  233 (288)
T cd07863         155 ARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG-LPPEDDWPR  233 (288)
T ss_pred             cccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhC-CCChhhCcc
Confidence                      223578899999999988999999999999999999999999976433222222221110 000000000


Q ss_pred             -------Hhhhhcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 -------AADKRLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 -------~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                             ...+...   .....+..+.+.+++..|++.||++|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                   0000000   0011123456788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.5e-34  Score=313.92  Aligned_cols=249  Identities=22%  Similarity=0.258  Sum_probs=189.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .+|...+.||+|+||.||++.+...+..||||...     ...+.+|++++++++|+|||++++++..++..++|||++ 
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-
Confidence            36888999999999999999999889999999643     234678999999999999999999999999999999999 


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      .++|.+++.....   .++|.+++.++.|+++||+|||+   .+|+||||||+||||+.++.++|.|...          
T Consensus       243 ~~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        243 RSDLYTYLGARLR---PLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            5799998865432   48999999999999999999999   9999999999999999999999987321          


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccccc----chhhHHHHHHhhh---c------
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH----KMVNLVDWVWGLY---A------  560 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~----~~~~l~~~~~~~~---~------  560 (645)
                          ...||..|+|||++.+..++.++|||||||+||||++|..|+.......    ....+...+....   .      
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~  396 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA  396 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence                1358999999999999999999999999999999999887654322111    1111111111100   0      


Q ss_pred             cCchhHHhhhh----ccCCCCH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          561 EGRIIEAADKR----LNGAFNE-------DEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       561 ~~~~~~~~d~~----l~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ..++.......    .......       .....+.+++..||+.||.+|||+.|+++.
T Consensus       397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            00011110000    0000000       112357788899999999999999999874

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.4e-34  Score=297.34  Aligned_cols=239  Identities=26%  Similarity=0.352  Sum_probs=193.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +.|+..++||+|+||.||+|....++..+++|.+... ....+.+.+|+.++++++|+|++++++.+..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            5677889999999999999999988999999998763 344677899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|..++.+...   .+++..+..++.|++.||+|||+   .+++||||||+||+++.++..++.|..          
T Consensus        92 ~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  165 (292)
T cd06644          92 PGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ  165 (292)
T ss_pred             CCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence            99999988865432   38999999999999999999998   999999999999999999999998732          


Q ss_pred             --cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 --TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                        ....++..|+|||++.     ...++.++|||||||++|||++|+.||.......   .+...    .. ..     .
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~~~~----~~-~~-----~  232 (292)
T cd06644         166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLLKI----AK-SE-----P  232 (292)
T ss_pred             ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH---HHHHH----hc-CC-----C
Confidence              1224678899999985     3446889999999999999999999986533211   11110    00 00     0


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +.+  ..+......+.+++..||+.+|++||+++++++
T Consensus       233 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         233 PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000  112233456788899999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2.1e-34  Score=295.13  Aligned_cols=243  Identities=24%  Similarity=0.387  Sum_probs=194.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...++||+|+||.||+|...+.   ...+++|.....  ....+.+.+|+.++++++|+||++++++|.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            4577788999999999999987543   356899987653  3345689999999999999999999999875 467899


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+++++|.+++.....   .+++.+++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|...     
T Consensus        85 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          85 MELAPLGELRSYLQVNKY---SLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             EEcCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecc
Confidence            999999999999976432   38999999999999999999998   9999999999999999999999977311     


Q ss_pred             --------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          498 --------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       498 --------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ...++..|+|||.+....++.++||||||+++||+++ |+.||.......    ...+.    ..+      
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~----~~~~~----~~~------  224 (270)
T cd05056         159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND----VIGRI----ENG------  224 (270)
T ss_pred             cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHH----HcC------
Confidence                    1123457999999988889999999999999999986 999997643211    11111    000      


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                         .....+...+..+.+++.+|+..+|.+|||+.++++.|++...
T Consensus       225 ---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         225 ---ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             ---CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence               0111223445678889999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.3e-34  Score=297.02  Aligned_cols=253  Identities=22%  Similarity=0.266  Sum_probs=193.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..+|+|++....   ...+.+.+|++++++++|+|++++++++...+..++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46788899999999999999999889999999876532   234568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|..++....    .+++.++..++.|++.||+|||+   ++++||||||+||+++.++..++.|..        
T Consensus        81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            999998888775433    38999999999999999999999   999999999999999999999998721        


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh-------hccCch
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL-------YAEGRI  564 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~-------~~~~~~  564 (645)
                          ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+.......       +.....
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07847         154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF  233 (286)
T ss_pred             cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence                12346788999999876 567899999999999999999999997644322111111110000       000000


Q ss_pred             h-HHhhhhccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 I-EAADKRLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~-~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      . ....+......+     ......+.+++..||+++|++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            0 000000000000     122456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-34  Score=299.11  Aligned_cols=253  Identities=25%  Similarity=0.316  Sum_probs=194.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..|++|.+...   ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3688889999999999999999988999999988652   2335678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |++++.|..+.....    .+++.++..++.|++.||+|||+   .+++||||+|+||+++.++.+++.|..        
T Consensus        81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEASPG----GLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999877766554322    28999999999999999999999   999999999999999999999998721        


Q ss_pred             -----cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc--------cC
Q 041096          497 -----TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA--------EG  562 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~--------~~  562 (645)
                           ....++..|+|||++.+. .++.++||||||+++|||++|+.||......+....+.........        ..
T Consensus       154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07833         154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP  233 (288)
T ss_pred             ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence                 123567889999999887 8899999999999999999999999754322111111110000000        00


Q ss_pred             ch-----hHHhhh-hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RI-----IEAADK-RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~-----~~~~d~-~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..     .+..++ .+...++......+.+++..||+.+|++||+++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00     000000 0000112223677899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.5e-34  Score=299.25  Aligned_cols=237  Identities=25%  Similarity=0.353  Sum_probs=195.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .+|+..+.||.|++|.||+|....++..+++|.+... ....+.+.+|+.+++.++|+||+++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4688889999999999999999888999999988653 334567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++...     .+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|..          
T Consensus        99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          99 AGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             CCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            999999998643     28999999999999999999999   999999999999999999999998732          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||.+.+..++.++|||||||++|||++|+.||........   .. ...   .. .     .+.+  
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~---~~-~~~---~~-~-----~~~~--  235 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LY-LIA---TN-G-----TPEL--  235 (296)
T ss_pred             cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH-HHH---hc-C-----Cccc--
Confidence              123577899999999988899999999999999999999999976432111   00 000   00 0     0001  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+......+.+++..||..+|.+||++.++++
T Consensus       236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            122233456778899999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.1e-35  Score=310.26  Aligned_cols=228  Identities=25%  Similarity=0.309  Sum_probs=183.6

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHH-HHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELS-IIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|....++..+|+|++...    ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999999988999999988652    223445566655 46778999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++.+...++.||+.||+|||+   .+|+||||||+|||++.++..|+.|..            
T Consensus        81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~  153 (325)
T cd05604          81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT  153 (325)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence            99999887543    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||...+...    +.+.            .....+  ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~----~~~~------------~~~~~~--~~  215 (325)
T cd05604         154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE----MYDN------------ILHKPL--VL  215 (325)
T ss_pred             ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH----HHHH------------HHcCCc--cC
Confidence            12358999999999999999999999999999999999999997543211    1110            000111  11


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVF  606 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl  606 (645)
                      .......+.+++..|++.+|.+||++++.+
T Consensus       216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         216 RPGASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             CCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence            122345577888999999999999986433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.7e-34  Score=292.50  Aligned_cols=234  Identities=26%  Similarity=0.408  Sum_probs=193.1

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc----------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~----------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      |.....||+|++|.||+|....++..+|+|.+.....          ..+.+.+|+.++++++|+||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            5667889999999999999988889999998764211          124688999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--  497 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--  497 (645)
                      ++|+||+++++|.+++....    .+++..+..++.|++.||+|||+   .+++||||||+||+++.++..++.|...  
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             EEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence            99999999999999997643    38899999999999999999998   8999999999999999999999977210  


Q ss_pred             ----------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          498 ----------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       498 ----------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                      ...|+..|+|||.+.+..++.++||||||+++|||++|+.||.......   .+.         
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~---------  222 (267)
T cd06628         155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ---AIF---------  222 (267)
T ss_pred             ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH---HHH---------
Confidence                            1246788999999998889999999999999999999999997543211   110         


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ... .......+......+.+++..||+++|.+||++.++++
T Consensus       223 ----~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         223 ----KIG-ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ----HHh-ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                000 11122333445677888999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3.6e-34  Score=298.16  Aligned_cols=244  Identities=24%  Similarity=0.315  Sum_probs=198.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|...+.||+|+||.||+|....++..+|+|.+... ....+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5788899999999999999999888999999988763 334566889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++.+.     .+++.++..++.|++.||.|||+   .+++||||||+|||++.++..++.|..          
T Consensus        99 ~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          99 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             CCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            999999998643     27899999999999999999999   999999999999999999999998732          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....++..|+|||.+.+..++.++|||||||++|||++|+.||............       ..        ......
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-------~~--------~~~~~~  235 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------AT--------NGTPEL  235 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-------cc--------CCCCCC
Confidence              1235788999999999988999999999999999999999999654321110000       00        000000


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      ..+......+.+++..||+.+|++||+++++++  .++...+
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence            122234456778889999999999999999987  4443333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=4.4e-34  Score=292.23  Aligned_cols=236  Identities=25%  Similarity=0.386  Sum_probs=188.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc------chhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH------EGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~  419 (645)
                      .+|...+.||+|+||.||+|....++..+++|++....      .....+.+|+.++++++|+||+++++++.+  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            46888999999999999999998889999999875421      234568899999999999999999998875  3578


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--  497 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--  497 (645)
                      ++++||+++++|.+++....    .+++...+.++.|++.||+|||+   .+++||||||+||+++.++..++.|...  
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~  154 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASK  154 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence            99999999999999997543    28899999999999999999998   9999999999999999999999977321  


Q ss_pred             -------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          498 -------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       498 -------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                   ...++..|+|||++.+..++.++|||||||++|||++|+.||.......   ..             
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~---~~-------------  218 (266)
T cd06651         155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA---AI-------------  218 (266)
T ss_pred             ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH---HH-------------
Confidence                         1247788999999998889999999999999999999999997532111   00             


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ............+......+..++ .||..+|++||+|++|++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         219 FKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            001101111222333334444454 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.2e-34  Score=329.33  Aligned_cols=247  Identities=23%  Similarity=0.293  Sum_probs=196.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..++||+|+||.||+|....++..||+|++...    ....+.|.+|++++++++||||+++++++.+++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5788899999999999999999988999999988652    223467999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCC-------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          424 EYMPNGSLDRMLYQDSE-------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      ||+++|+|.+++.....       ....+++..++.++.||++||+|||+   .+|+||||||+|||++.++.+++.|..
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            99999999999874321       12336788899999999999999999   999999999999999999999987621


Q ss_pred             c------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccccc
Q 041096          497 T------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH  546 (645)
Q Consensus       497 ~------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~  546 (645)
                      .                              ..+||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            0                              1358999999999999999999999999999999999999997632211


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHcCC
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-SMRRVFQILNNE  612 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~~vl~~L~~~  612 (645)
                          ....  .     .   ..++.-. ....+.+..+.+++.+|++.||++|| +++++++.|+..
T Consensus       239 ----i~~~--~-----~---i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        239 ----ISYR--D-----V---ILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             ----hhhh--h-----h---ccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                0000  0     0   0000000 00113345678889999999999996 566677666543

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=8.4e-35  Score=306.37  Aligned_cols=225  Identities=26%  Similarity=0.317  Sum_probs=182.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHH-HHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELS-IIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||.||+|+...++..+|+|++...    ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999988999999988652    222344555554 57889999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      ++|..++....    .++..+...++.||++||+|||+   .+|+||||||+||||+.++.+||.|..            
T Consensus        81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  153 (321)
T cd05603          81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT  153 (321)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence            99998886543    27888889999999999999998   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+..    .+.+.+            ....  ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i------------~~~~--~~~  215 (321)
T cd05603         154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS----QMYDNI------------LHKP--LQL  215 (321)
T ss_pred             ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH----HHHHHH------------hcCC--CCC
Confidence            1235889999999999989999999999999999999999999764311    111111            1111  122


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMR  603 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~  603 (645)
                      +......+.+++..|++.+|.+||+..
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         216 PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            333455688899999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-34  Score=288.99  Aligned_cols=234  Identities=27%  Similarity=0.445  Sum_probs=192.2

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ++||+|+||.||++.... +..+++|.......  ....+.+|++++++++|+||+++++++.+.+..++||||+++++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            469999999999999987 89999998876333  456799999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc-------------
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------  498 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~-------------  498 (645)
                      .+++.....   .+++..++.++.+++.||+|||+   ++++||||||+||+++.++..++.|....             
T Consensus        80 ~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (251)
T cd05041          80 LTFLRKKKN---RLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG  153 (251)
T ss_pred             HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence            999975432   37899999999999999999998   99999999999999999999999873211             


Q ss_pred             -cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          499 -TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       499 -~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                       ..++..|+|||.+.++.++.++||||||+++|||++ |..||.......    ..             +.+........
T Consensus       154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~----~~-------------~~~~~~~~~~~  216 (251)
T cd05041         154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ----TR-------------ERIESGYRMPA  216 (251)
T ss_pred             cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH----HH-------------HHHhcCCCCCC
Confidence             122456999999998899999999999999999999 888886543211    11             11111111122


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      +...+..+.+++..|++.+|.+|||+.++++.|+.
T Consensus       217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            33445678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-35  Score=295.33  Aligned_cols=234  Identities=23%  Similarity=0.374  Sum_probs=200.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .+|++.+.||+|.||+|-++.....|+.||||.+++    +.++.-.+.+||++|+.|+||||+.++.+|++.+...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            457777889999999999999988899999998876    3445567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec---------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d---------  494 (645)
                      ||..+|.|++|+..++.    |+......++.||.+|+.|+|.   ++++|||||.+|||||.++++||.|         
T Consensus       133 EYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  133 EYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence            99999999999988765    9999999999999999999999   9999999999999999999999987         


Q ss_pred             --cccccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          495 --SFTLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       495 --~~~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                        .....||++-|.+||++.+..| .+..|-||+||+||-|+.|..||++.+..    .++                .+-
T Consensus       206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk----~lv----------------rQI  265 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK----RLV----------------RQI  265 (668)
T ss_pred             ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH----HHH----------------HHh
Confidence              2345689999999999999888 57899999999999999999999875431    111                111


Q ss_pred             ccCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          572 LNGAFN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       572 l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      -++.+. ++.+....-|+.||+..+|++|.|+.+|...
T Consensus       266 s~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  266 SRGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             hcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            122222 2334556678899999999999999999763

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=6.1e-35  Score=308.02  Aligned_cols=229  Identities=24%  Similarity=0.319  Sum_probs=183.5

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHH-HHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELS-IIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +.||+|+||.||+|....++..+|+|++...    ......+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4699999999999999988999999988652    122334455544 56788999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|.+++.....    +.......++.||++||+|||+   .+|+||||||+|||++.++..++.|..            
T Consensus        81 ~~L~~~~~~~~~----~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~  153 (325)
T cd05602          81 GELFYHLQRERC----FLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT  153 (325)
T ss_pred             CcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence            999999976432    7788888899999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    .....            ....+  ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i------------~~~~~--~~  215 (325)
T cd05602         154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYDNI------------LNKPL--QL  215 (325)
T ss_pred             ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH----HHHHH------------HhCCc--CC
Confidence            12358999999999999999999999999999999999999997543211    11111            00111  12


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+....+.+++..|++.+|.+||++.+.+.
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence            2234456778889999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=5.4e-35  Score=312.87  Aligned_cols=189  Identities=30%  Similarity=0.407  Sum_probs=169.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..+|+|++...    ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3688889999999999999999989999999988652    233456888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++|+|.+++.+...    +++.....++.|++.||+|||+   .+|+||||||+||||+.++.+++.|...      
T Consensus        81 E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          81 EFLPGGDMMTLLMKKDT----LSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             eCCCCccHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            99999999999976433    8999999999999999999999   9999999999999999999999977321      


Q ss_pred             -----------------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC
Q 041096          498 -----------------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR  536 (645)
Q Consensus       498 -----------------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~  536 (645)
                                                               ..+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~  233 (360)
T cd05627         154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (360)
T ss_pred             ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence                                                     236899999999999999999999999999999999999


Q ss_pred             CCCCccc
Q 041096          537 RPIERET  543 (645)
Q Consensus       537 ~P~~~~~  543 (645)
                      .||....
T Consensus       234 ~Pf~~~~  240 (360)
T cd05627         234 PPFCSET  240 (360)
T ss_pred             CCCCCCC
Confidence            9997643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-34  Score=297.20  Aligned_cols=241  Identities=26%  Similarity=0.342  Sum_probs=194.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|..... ....+.+.+|++++++++|+||+++++.+......++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            45688889999999999999999888999999988653 33456799999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....   .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++..++.|..         
T Consensus        84 ~~~~~L~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (280)
T cd06611          84 CDGGALDSIMLELER---GLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL  157 (280)
T ss_pred             cCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence            999999999876432   38999999999999999999999   999999999999999999999997732         


Q ss_pred             ---cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 ---TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                         ....|+..|+|||.+.     ...++.++||||||+++|||++|+.||.......   .+....     ...     
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~---~~~~~~-----~~~-----  224 (280)
T cd06611         158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR---VLLKIL-----KSE-----  224 (280)
T ss_pred             cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH---HHHHHh-----cCC-----
Confidence               1235788999999875     3456789999999999999999999997543211   111110     000     


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .+.+  ..+......+.+++..||+.+|.+||+++++++.
T Consensus       225 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         225 PPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            0011  1122334567888999999999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.3e-34  Score=307.85  Aligned_cols=248  Identities=20%  Similarity=0.257  Sum_probs=190.7

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-----
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-----  417 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----  417 (645)
                      ..++|+..+.||+|+||.||++....++..+|+|.+...   ......+.+|+.+++.++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457899999999999999999999888999999998652   334567889999999999999999999886543     


Q ss_pred             -eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          418 -ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       418 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                       ..|+||||++ ++|...+..      .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..
T Consensus        99 ~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg  168 (359)
T cd07876          99 QDVYLVMELMD-ANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  168 (359)
T ss_pred             ceeEEEEeCCC-cCHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCC
Confidence             5799999996 467666632      27888899999999999999999   999999999999999999999998832


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC---
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG---  562 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~---  562 (645)
                                 ....||..|+|||.+.+..++.++|||||||++|||++|+.||...+.......+.    ......   
T Consensus       169 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~----~~~~~~~~~  244 (359)
T cd07876         169 LARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI----EQLGTPSAE  244 (359)
T ss_pred             CccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----HhcCCCcHH
Confidence                       22367889999999999999999999999999999999999997653211111110    000000   


Q ss_pred             -------chhHHhhh--hccC----------------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 -------RIIEAADK--RLNG----------------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 -------~~~~~~d~--~l~~----------------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                             .+......  ...+                .........+.+++..|++.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                   00000000  0000                001112356788999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.9e-35  Score=306.47  Aligned_cols=239  Identities=25%  Similarity=0.381  Sum_probs=204.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe-EEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE-LLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~lV~  423 (645)
                      ++|...+++|+|+||.++...++..+..+++|.+...   ...++....|+.++++++|||||.+.+.+.+++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            4677889999999999999999988999999988763   3344578999999999999999999999998887 99999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      +||+||+|.+.+.+.+  +..++..++.+++.|++.|+.|||+   ..|+|||||+.||+++.+..++++|.        
T Consensus        84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            9999999999998765  3458999999999999999999998   99999999999999999999999882        


Q ss_pred             ----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          496 ----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       496 ----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ....+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+-    ..++.             .+-+.
T Consensus       159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m----~~Li~-------------ki~~~  221 (426)
T KOG0589|consen  159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM----SELIL-------------KINRG  221 (426)
T ss_pred             chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch----HHHHH-------------HHhhc
Confidence                2336899999999999999999999999999999999999999976432    22222             12222


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      +....+......+..++..|++.+|..||++.+++..
T Consensus       222 ~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  222 LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            2334566667788889999999999999999999864

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-34  Score=289.52  Aligned_cols=241  Identities=24%  Similarity=0.329  Sum_probs=196.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||.||+|....++..+++|.+... ....+.+.+|++++++++|+||+++++++.+.+..+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            5788889999999999999999888889999988763 334678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++.....   .++..++..++.|++.||+|||+   .+++|+||||+||+++.++..++.|..          
T Consensus        83 ~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          83 GGGSLQDIYQVTRG---PLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             CCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            99999999876522   38999999999999999999998   999999999999999999999998731          


Q ss_pred             --cccccCCcccCcccccCC---CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 --TLTAGTMGYLAPEYLQYG---TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~---~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                        ....++..|+|||.+...   .++.++||||||+++|||++|+.||.........   ....     ....   ..+.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~---~~~~-----~~~~---~~~~  225 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL---FLIS-----KSNF---PPPK  225 (262)
T ss_pred             ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH-----hccC---CCcc
Confidence              223567889999999776   7899999999999999999999999754321111   0000     0000   0000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +  .........+.+++.+||+.+|.+|||+.+++.
T Consensus       226 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         226 L--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             c--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1  112334567889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=3.5e-34  Score=290.81  Aligned_cols=238  Identities=28%  Similarity=0.439  Sum_probs=192.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|...+.||+|+||.||+|..  .+..+|+|...... ....+.+|+.++++++|+|++++++++... ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            3577889999999999999975  47789999886533 346789999999999999999999998764 5799999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------c
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------L  498 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------~  498 (645)
                      +++|.+++.....  ..+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+++.|...         .
T Consensus        82 ~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~  156 (254)
T cd05083          82 KGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN  156 (254)
T ss_pred             CCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCC
Confidence            9999999976432  248899999999999999999998   9999999999999999999999988321         1


Q ss_pred             cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       499 ~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...+..|+|||.+.+..++.++||||||+++|||++ |+.||......    ....             .+........+
T Consensus       157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~-------------~~~~~~~~~~~  219 (254)
T cd05083         157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK----EVKE-------------CVEKGYRMEPP  219 (254)
T ss_pred             CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH----HHHH-------------HHhCCCCCCCC
Confidence            223567999999998899999999999999999998 99998654321    1111             11111111223


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+..+.+++..||+.+|++||+++++++.|++
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            3445678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=5.2e-34  Score=289.22  Aligned_cols=237  Identities=25%  Similarity=0.363  Sum_probs=193.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.||++....++..+|+|.+...   ......+.+|++++++++|+|++++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477889999999999999999888999999987653   33456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF--------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~--------  496 (645)
                      +++++|.+++....  ...+++..+..++.|++.||+|||+   ++++|+||||+||+++.+. ..++.|..        
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            99999999997643  2348999999999999999999999   9999999999999998654 46776621        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||.+....++.++||||||+++|||++|+.||...+..    ......            . ....
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~----~~~~~~------------~-~~~~  218 (256)
T cd08220         156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP----ALVLKI------------M-SGTF  218 (256)
T ss_pred             ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH----HHHHHH------------H-hcCC
Confidence               1235788999999999888999999999999999999999998654321    111110            0 0111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+......+.+++..||+.+|.+|||++++++
T Consensus       219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1222234566889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-34  Score=298.30  Aligned_cols=239  Identities=24%  Similarity=0.291  Sum_probs=195.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|++|.||+|....++..+|+|.+....    ...+.+.+|++++.+++|+||+++++.+...+..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36888899999999999999998889999999887632    23457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+.+++|.+++....  +..+++..+..++.|+++||+|||+   .+++||||||+||+++.++.+++.|...      
T Consensus        81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            9999999999987543  2348999999999999999999998   9999999999999999999999976211      


Q ss_pred             -----------------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          498 -----------------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       498 -----------------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                                                         ...|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  235 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS  235 (316)
T ss_pred             cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence                                               125788899999999888999999999999999999999999754


Q ss_pred             ccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 041096          543 TEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS----MRRVFQ  607 (645)
Q Consensus       543 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt----~~~vl~  607 (645)
                      ......                .+..+....-.........+.+++.+||+.+|++||+    ++++++
T Consensus       236 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         236 NRDETF----------------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             chHHHH----------------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            322111                1111111111111124678899999999999999999    666655

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.9e-34  Score=294.99  Aligned_cols=242  Identities=24%  Similarity=0.370  Sum_probs=194.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +|+..+.||+|+||.||++....++..+|+|.+...  ......+.+|++++++++|+||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            567788999999999999999888999999987652  333567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|..++..... ...+++..+..++.|++.||.|||+  ..+++||||||+||+++.++..+++|..          
T Consensus        82 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (286)
T cd06622          82 DAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA  158 (286)
T ss_pred             CCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence            99999999876421 2348999999999999999999996  2589999999999999999999998732          


Q ss_pred             cccccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 TLTAGTMGYLAPEYLQYGT------ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~------~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                      ....++..|+|||.+.+..      ++.++|||||||++|||++|+.||.......    ....         +....+ 
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~---------~~~~~~-  224 (286)
T cd06622         159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN----IFAQ---------LSAIVD-  224 (286)
T ss_pred             ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh----HHHH---------HHHHhh-
Confidence            1234778999999986543      4889999999999999999999996532211    1100         001111 


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......+.+....+.+++.+||+.+|++||+++++++
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         225 GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            1112334446677888999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=8.9e-34  Score=289.70  Aligned_cols=236  Identities=24%  Similarity=0.344  Sum_probs=190.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC------cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS------HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~  419 (645)
                      .+|+..++||+|+||.||+|....++..||+|.+...      ....+.+.+|+.++++++|+||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4688899999999999999999988999999987532      12245788899999999999999999988763  468


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      +++|||+++++|.+++.....    +++...++++.|++.||+|||+   .+++|+||||+||+++.++..++.|..   
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~  154 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGA----LTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASK  154 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence            899999999999999875432    7888899999999999999998   999999999999999999999997732   


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ....|+..|+|||.+.+..++.++|||||||++|||++|+.||.......   .+.            
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~~------------  219 (265)
T cd06652         155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA---AIF------------  219 (265)
T ss_pred             ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH---HHH------------
Confidence                        12347888999999988889999999999999999999999996532111   110            


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       +..........+......+..++..|+. +|++||+++++++
T Consensus       220 -~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         220 -KIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             -HHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence             1111111223344555667778888885 8999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=3.9e-34  Score=298.28  Aligned_cols=252  Identities=19%  Similarity=0.248  Sum_probs=192.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|...+.||+|+||.||+|....++..||+|.+...  ......+.+|+.++++++|+||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4688889999999999999999888999999987653  23345678999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      ++ ++|.+++.....   .+++.....++.|+++||+|||+   .+++||||||+||+++.++..+++|..         
T Consensus        86 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  158 (301)
T cd07873          86 LD-KDLKQYLDDCGN---SINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT  158 (301)
T ss_pred             cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence            96 699998875433   38899999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh---
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD---  569 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d---  569 (645)
                         ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+... ............+.   
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (301)
T cd07873         159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRI-LGTPTEETWPGILSNEE  237 (301)
T ss_pred             CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-cCCCChhhchhhhcccc
Confidence               12346788999998865 45789999999999999999999999764322111111100 00000000000000   


Q ss_pred             ------hhccCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 ------KRLNGA----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ------~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                            +.....    ........+.+++.+|++.||.+|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                  000000    01122345778999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-34  Score=296.12  Aligned_cols=242  Identities=23%  Similarity=0.297  Sum_probs=195.3

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------------hhHhHHHHHHHHhhcCCCCeeee
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------------GKTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------------~~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      ...++|+..+.||+|.||.|-+|....++..||||++.+...               ..+...+||.+|++++|+|||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            445789999999999999999999999999999998865211               12467899999999999999999


Q ss_pred             eeeeeeC--CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC
Q 041096          410 LGWCAEK--GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       410 ~g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~  487 (645)
                      +.+..+.  +.+|||+|||..|.+...=    .....+...+.++++.++..||+|||.   ++|+||||||+|+||+++
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSD  246 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCC
Confidence            9998764  5899999999888775432    112228999999999999999999999   999999999999999999


Q ss_pred             CCeeeecc-----------------ccccccCCcccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCcccccc
Q 041096          488 FNARLESS-----------------FTLTAGTMGYLAPEYLQYGT----ATEKTDVFSYGVVVLEVACGRRPIERETEGH  546 (645)
Q Consensus       488 ~~~kl~d~-----------------~~~~~gt~~y~APE~~~~~~----~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~  546 (645)
                      +.+||+|.                 ....+||+.|+|||...++.    ...+.||||+||.||-|+.|+.||.....  
T Consensus       247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--  324 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--  324 (576)
T ss_pred             CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence            99999872                 12357999999999987743    25688999999999999999999976432  


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                        ..+.            .+++...|.-...++.-+.+.+|++.+|.+||++|.+..+|....
T Consensus       325 --~~l~------------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  325 --LELF------------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             --HHHH------------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence              1111            123333342222335677888999999999999999999987754

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.6e-34  Score=329.98  Aligned_cols=254  Identities=22%  Similarity=0.337  Sum_probs=196.8

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCe
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGE  418 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~  418 (645)
                      ....++|.+.+.||+|+||+||++....++..+|+|.+...   ......+..|+.++.+|+|||||++++++..  .+.
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            34557899999999999999999999999999999987652   3345678999999999999999999998754  357


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC----CCCeeeCCCCCCcEEEcCC-------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC----EQQVIHRDIKASNIMLDAN-------  487 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~ivHrDlkp~NIlld~~-------  487 (645)
                      +||||||+++|+|.++|.........+++..++.|+.||+.||+|||+..    ..+|+||||||+||||+.+       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            89999999999999999764433345999999999999999999999732    1459999999999999653       


Q ss_pred             ----------CCeeeeccc-----------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          488 ----------FNARLESSF-----------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       488 ----------~~~kl~d~~-----------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                                ..+||.|..           ....||+.|+|||++..  ..++.++|||||||+||||++|+.||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                      236777632           22468999999999864  4589999999999999999999999975322


Q ss_pred             ccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          545 GHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       545 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      .   ..++..    ....       +.+.   .......+.+++..||+.+|.+||++.++++  .|....+
T Consensus       249 ~---~qli~~----lk~~-------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        249 F---SQLISE----LKRG-------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             H---HHHHHH----HhcC-------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence            1   111111    0000       0110   0122456788999999999999999999984  5654443

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=6e-34  Score=288.91  Aligned_cols=236  Identities=26%  Similarity=0.389  Sum_probs=193.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      +|+..+.||+|++|.||+|....++..+++|.+....      +..+.+.+|+.++++++|+||+++++++...+..+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999998788999999875522      2456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      +||+++++|.+++....    .+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++..|+.|..      
T Consensus        81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            99999999999997543    38899999999999999999999   999999999999999999999998731      


Q ss_pred             -----cccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....|+..|+|||.+.... ++.++|+||||+++|||++|+.||......   .....    .         ...
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~---~~~~~----~---------~~~  217 (258)
T cd06632         154 EFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV---AAVFK----I---------GRS  217 (258)
T ss_pred             ccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH---HHHHH----H---------Hhc
Confidence                 2345788899999988766 899999999999999999999999754311   11111    0         000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .-....+......+.+++.+||+.+|.+||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         218 KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            0011223334566788899999999999999999975

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=4.7e-34  Score=291.94  Aligned_cols=240  Identities=23%  Similarity=0.309  Sum_probs=191.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|...+.||+|+||.||+|....++..+|+|.++... .....+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46777788999999999999998889999999887532 33456888999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++....    .+++.+.+.++.|++.||.|||+   .+++|+||||+||+++.++..++.|..          
T Consensus        89 ~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06645          89 GGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA  161 (267)
T ss_pred             CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence            9999999987544    38999999999999999999999   899999999999999999999987621          


Q ss_pred             --cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 --TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                        ....|+..|+|||++.   .+.++.++|||||||++|||++|+.||........   +.........        .+.
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~--------~~~  230 (267)
T cd06645         162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---LFLMTKSNFQ--------PPK  230 (267)
T ss_pred             ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh---HHhhhccCCC--------CCc
Confidence              2236889999999874   45688999999999999999999999865332111   1000000000        000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...  .......+.+++..|++.+|++||+++++++
T Consensus       231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            000  0112345778999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=6.4e-34  Score=295.90  Aligned_cols=262  Identities=20%  Similarity=0.280  Sum_probs=196.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      +|+..+.||+|++|.||+|....++..|++|.+.....      ....+..|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            46778899999999999999988899999999876322      244577899999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+ +++|.+++....   ..+++..+..++.||++||+|||+   .+++|+||||+||+++.++.++++|..      
T Consensus        81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence            9999 999999997543   248999999999999999999999   999999999999999999999997721      


Q ss_pred             ------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----h-ccCch
Q 041096          497 ------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----Y-AEGRI  564 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~-~~~~~  564 (645)
                            ....++..|+|||.+.+ ..++.++|||||||++|||++|..||...................    + .....
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (298)
T cd07841         154 SPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSL  233 (298)
T ss_pred             CCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccc
Confidence                  11235678999998865 467899999999999999999987776543221111111100000    0 00000


Q ss_pred             hHHhhhhccCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCCCC
Q 041096          565 IEAADKRLNGA-----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEPLV  617 (645)
Q Consensus       565 ~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~~~  617 (645)
                      ...........     ........+.+++..||+.+|++|||+.++++.  +++...+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~  293 (298)
T cd07841         234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP  293 (298)
T ss_pred             cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence            00000000001     112235678899999999999999999999984  655444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=7e-34  Score=291.31  Aligned_cols=240  Identities=22%  Similarity=0.320  Sum_probs=182.6

Q ss_pred             eeccCCceEEEEEEECCC--CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          355 ILGRGAFGNVYKAYFASS--GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~--~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .||+|+||.||+|.....  ...+++|.+...  ....+.|.+|+.+++.++||||+++++.|.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            599999999999976432  235667766543  2345789999999999999999999999999999999999999999


Q ss_pred             HhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------------
Q 041096          431 LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------  497 (645)
Q Consensus       431 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------------  497 (645)
                      |.+++.+.......+++.....++.||++||+|||+   .+++||||||+|||++.++..++.|...             
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            999998654333446778888999999999999998   9999999999999999999999987321             


Q ss_pred             -ccccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          498 -LTAGTMGYLAPEYLQY-------GTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       498 -~~~gt~~y~APE~~~~-------~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                       ...++..|+|||++..       ..++.++|||||||++|||++ |..||......    .....+   .. +......
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~~~~~~---~~-~~~~~~~  230 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR----EVLNHV---IK-DQQVKLF  230 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH---Hh-hcccccC
Confidence             1246788999998753       245789999999999999997 56687643321    111111   11 1111222


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ++.+...    ....+.+++..|| .+|.+||++++|++.|.
T Consensus       231 ~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         231 KPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            2333222    3345677888899 67999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.2e-33  Score=290.95  Aligned_cols=234  Identities=24%  Similarity=0.355  Sum_probs=193.7

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      |+..+.||+|+||.||+|....++..+|+|.....  ....+.+.+|+.++.+++|+||+++++++.+++..++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            56678899999999999999888999999987653  2344678899999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +++|.+++...     .+++.....++.|++.||.|||+   .+++|+||||+||+++.++..++.|..           
T Consensus        86 ~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          86 GGSALDLLEPG-----PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence            99999998643     38999999999999999999998   999999999999999999999998731           


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                       ....++..|+|||.+.+..++.++|||||||++|||++|..||......    ....             .+.......
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~-------------~~~~~~~~~  220 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM----KVLF-------------LIPKNNPPT  220 (277)
T ss_pred             hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH----HHHH-------------HHhcCCCCC
Confidence             1125788899999999888999999999999999999999998653211    1110             011111112


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .+......+.+++..||+.+|.+||++.++++.
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            233445667889999999999999999999983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.1e-34  Score=306.35  Aligned_cols=254  Identities=20%  Similarity=0.240  Sum_probs=192.2

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----  416 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----  416 (645)
                      ...++|+..+.||+|+||.||++.....+..+|+|++...   ......+.+|+.+++.++|+||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3457899999999999999999999888999999988753   23346788999999999999999999987643     


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                       ...++||||++ ++|.+.+..      .+++..+..++.|+++||+|||+   ++|+||||||+||||+.++.+|++|.
T Consensus        94 ~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Df  163 (355)
T cd07874          94 FQDVYLVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_pred             cceeEEEhhhhc-ccHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeC
Confidence             35799999995 467776642      27889999999999999999999   99999999999999999999999872


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh----hhc
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG----LYA  560 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~----~~~  560 (645)
                      .           ....||..|+|||++.+..++.++|||||||++|||++|+.||............+.....    ...
T Consensus       164 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (355)
T cd07874         164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK  243 (355)
T ss_pred             cccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            2           2246889999999999999999999999999999999999999764321111111110000    000


Q ss_pred             --cCchhHHhhh---------------hcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          561 --EGRIIEAADK---------------RLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       561 --~~~~~~~~d~---------------~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        .......++.               .+.   ..........+.+++..|++.||++|||+.|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence              0000000000               000   00111124567899999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=6.7e-34  Score=293.19  Aligned_cols=240  Identities=27%  Similarity=0.405  Sum_probs=189.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHH-HhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSI-IACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||++....++..||+|++....  .....+..|+.. ++.++|+||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999999889999999887632  334456667665 566789999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      |++ |+|.+++.........+++..++.++.|++.||+|||+   + +++||||||+||+++.++..|+.|..       
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            995 78988887644334568999999999999999999998   6 89999999999999999999998732       


Q ss_pred             ----cccccCCcccCcccccC----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 ----TLTAGTMGYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                          ....|+..|+|||.+.+    ..++.++|+|||||++|||++|+.||......  ...+.             ...
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~-------------~~~  221 (283)
T cd06617         157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--FQQLK-------------QVV  221 (283)
T ss_pred             ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--HHHHH-------------HHH
Confidence                12357888999998865    45688999999999999999999999643211  11111             111


Q ss_pred             hhhccCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .. .....+ ......+.+++..||..+|.+||+++++++
T Consensus       222 ~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         222 EE-PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             hc-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            10 001111 123456888999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.5e-33  Score=291.81  Aligned_cols=250  Identities=26%  Similarity=0.318  Sum_probs=197.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~  423 (645)
                      ++|+..+.||.|++|.||++....++..+|+|.+....  .....+.+|++++++++|+||++++++|.+.  +.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36788899999999999999998889999999887532  3456799999999999999999999998653  4789999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.........+++.....++.|++.||+|||+   .+++|+||+|+||+++.++.+++.|..       
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            9999999999886543334458899999999999999999999   999999999999999999999998732       


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccc-cchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG-HKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .....+..+....    .... +....
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~  232 (287)
T cd06621         158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----PNPE-LKDEP  232 (287)
T ss_pred             cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----Cchh-hccCC
Confidence               1234678899999999999999999999999999999999999764321 1111222221110    0000 00000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        .........+.+++.+||+.+|.+|||+.|+++
T Consensus       233 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         233 --GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             --CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence              001123567889999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=9.7e-34  Score=289.27  Aligned_cols=236  Identities=26%  Similarity=0.407  Sum_probs=190.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +|...+.||+|+||.||+|... ++..+|+|.+....       .....+.+|++++++++|+||++++++|.+.+..++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            3667889999999999999874 57889999876421       123568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ++||+++++|.+++.+..    .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++..++.|..     
T Consensus        80 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          80 FMEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            999999999999997543    27899999999999999999998   899999999999999999999997721     


Q ss_pred             -------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          497 -------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                   ....|+..|+|||++.+..++.++||||||+++|||++|+.||........   .....    .   
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~----~---  222 (265)
T cd06631         153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---MFYIG----A---  222 (265)
T ss_pred             hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH---HHHhh----h---
Confidence                         123478889999999988899999999999999999999999975432111   00000    0   


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           ........+......+..++..||+.+|.+||++.++++
T Consensus       223 -----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         223 -----HRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             -----ccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                 000111223334566788999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.2e-33  Score=303.05  Aligned_cols=252  Identities=20%  Similarity=0.236  Sum_probs=191.8

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------  416 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------  416 (645)
                      ..++|...+.||+|+||.||++.....+..+|||++...   ....+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899999999999999999999888999999998753   23456788999999999999999999987543      


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      ...|+||||++ ++|.+++..      .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+|+.|..
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG  171 (364)
T cd07875         102 QDVYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  171 (364)
T ss_pred             CeEEEEEeCCC-CCHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCC
Confidence            35799999996 577777742      27889999999999999999999   999999999999999999999998732


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhh
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGL  558 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~  558 (645)
                                 ....||..|+|||++.+..++.++|||||||++|||++|+.||...+.......++...       +..
T Consensus       172 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T cd07875         172 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  251 (364)
T ss_pred             CccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence                       22468899999999999999999999999999999999999997654321111111000       000


Q ss_pred             hccCchhHHhh--------------hhcc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          559 YAEGRIIEAAD--------------KRLN----GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       559 ~~~~~~~~~~d--------------~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .. ..+...+.              +...    ..........+.+++..|++.||.+|||+.++++.
T Consensus       252 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         252 LQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hh-HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00 00000000              0000    00011123467889999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-33  Score=300.72  Aligned_cols=257  Identities=21%  Similarity=0.248  Sum_probs=192.9

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----  416 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----  416 (645)
                      ...++|...+.||+|+||.||+|....++..||||++....   ...+.+.+|+.++++++|+||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            34578999999999999999999998889999999887532   2345678999999999999999999987543     


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                       ...++++|++ +++|.+++...     .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|.
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Df  162 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDF  162 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCC
Confidence             3579999998 88998887532     28999999999999999999999   99999999999999999999999873


Q ss_pred             c---------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh-------h
Q 041096          496 F---------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG-------L  558 (645)
Q Consensus       496 ~---------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~-------~  558 (645)
                      .         ....||..|+|||++.+ ..++.++|||||||++|||++|+.||...........+......       .
T Consensus       163 g~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07878         163 GLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK  242 (343)
T ss_pred             ccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            2         23468999999999876 56899999999999999999999999754321111111110000       0


Q ss_pred             hccCchhHHhhhhccCCCCH--------HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          559 YAEGRIIEAADKRLNGAFNE--------DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~--------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ......... ...+. ..+.        .....+.+++..|++.||.+|||+.++++  .+...
T Consensus       243 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         243 ISSEHARKY-IQSLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             cchhhHHHH-hhccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            000000000 00000 0010        11234678999999999999999999996  35443

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-34  Score=293.68  Aligned_cols=250  Identities=22%  Similarity=0.290  Sum_probs=190.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|++|.||+|....++..||+|.+....  .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57888899999999999999998889999999886532  2234577899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      ++ ++|.+++.....   .+++.....++.|+++||.|||+   .+++||||||+||+++.++.+++.|...        
T Consensus        85 ~~-~~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  157 (291)
T cd07844          85 LD-TDLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS  157 (291)
T ss_pred             CC-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence            97 599998875433   38999999999999999999998   9999999999999999999999987321        


Q ss_pred             ----ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc---CchhHHh-
Q 041096          498 ----LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE---GRIIEAA-  568 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~-  568 (645)
                          ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......   ......+.....   ....... 
T Consensus       158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  234 (291)
T cd07844         158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE---DQLHKIFRVLGTPTEETWPGVSS  234 (291)
T ss_pred             ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHhcCCCChhhhhhhhh
Confidence                1235778999998875 458999999999999999999999997543211   111111111100   0000000 


Q ss_pred             -------------hhhccCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 -------------DKRLNGAF-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 -------------d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                   ...+.... .......+.+++..|++.+|++|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                         00000000 0011256678899999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=6.7e-34  Score=293.51  Aligned_cols=253  Identities=20%  Similarity=0.263  Sum_probs=190.6

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|++|.||+|....++..+|||.+....   .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999999999998889999999886532   2335788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +. ++|.+++.....  ..+++.++..++.|++.||+|||+   .+++||||+|+||+++.++..++.|..         
T Consensus        81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence            95 689998865432  348999999999999999999998   999999999999999999999997732         


Q ss_pred             ---cccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh----cc-CchhHH
Q 041096          497 ---TLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY----AE-GRIIEA  567 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~----~~-~~~~~~  567 (645)
                         ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...........+..+.....    .. ....+.
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07860         155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY  234 (284)
T ss_pred             cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence               1124577899999887644 68899999999999999999999976432221111111100000    00 000000


Q ss_pred             hh--hhccC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 AD--KRLNG----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d--~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..  +....    .........+.+++.+||+.||++|||++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            00  00000    000112345678899999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.6e-35  Score=294.71  Aligned_cols=258  Identities=23%  Similarity=0.299  Sum_probs=195.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-----eEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-----ELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~  423 (645)
                      .|...+++|+|+||.||+|.+..+++.||||+.-....   .--+|+++|+++.|||||+|.-++....     ...|||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            35567899999999999999999999999998755332   3347999999999999999998876432     346899


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeeccccc----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESSFTL----  498 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~~~~----  498 (645)
                      ||||. +|.++++.....+..++.....-+..|+.+||+|||+   .+|+||||||+|+|+|.+ +..||+|..+.    
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV  177 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence            99975 8999998654444558888888899999999999999   999999999999999987 77899884433    


Q ss_pred             -------cccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh--
Q 041096          499 -------TAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA--  568 (645)
Q Consensus       499 -------~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--  568 (645)
                             ..-|..|+|||.+.+ ..|+.+.||||.|||+.||+-|+..|.+.+..+....++ .+.+...++++..+-  
T Consensus       178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIi-k~lG~Pt~e~I~~mn~~  256 (364)
T KOG0658|consen  178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEII-KVLGTPTREDIKSMNPN  256 (364)
T ss_pred             cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHH-HHhCCCCHHHHhhcCcc
Confidence                   235778999999987 469999999999999999999999998855433322222 222332222221111  


Q ss_pred             -----hhhccC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          569 -----DKRLNG-----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       569 -----d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                           .+.+..     -+........++++.+|+..+|.+|.++.|++.  +++.+.+
T Consensus       257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence                 111111     123345667888999999999999999999986  4554433

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6.4e-34  Score=293.65  Aligned_cols=249  Identities=20%  Similarity=0.264  Sum_probs=189.6

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.||+|....+|..+|+|++...   ......+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            467788999999999999999988999999988652   22245678899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +. ++|.+++.....   .+++.....++.||++||.|||+   .+++||||||+||+++.++.+++.|..         
T Consensus        81 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          81 CD-QDLKKYFDSCNG---DIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             CC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence            96 588888765432   38999999999999999999999   999999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc------hhH
Q 041096          497 ---TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR------IIE  566 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~------~~~  566 (645)
                         ....++..|+|||.+.+. .++.++|||||||++|||++|+.|+........   .............      ..+
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD---QLKRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH---HHHHHHHHhCCCChHHhHHhhh
Confidence               123467889999998764 479999999999999999999998754322111   1111111000000      000


Q ss_pred             HhhhhccC---------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNG---------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~---------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+.....         .........+.+++..||+.||.+|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            00000000         011123456778999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.5e-33  Score=285.89  Aligned_cols=238  Identities=30%  Similarity=0.485  Sum_probs=194.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCC----eEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSG----SVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~----~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      |...+.||+|+||.||++.....+    ..+|+|.+.....  ..+.+..|++++..++|+||+++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            345688999999999999998765    8899999876443  5678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------  497 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------  497 (645)
                      ||+++++|.+++......  .+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|...      
T Consensus        81 e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             eccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            999999999999764321  18999999999999999999999   8999999999999999999999977211      


Q ss_pred             -------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          498 -------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       498 -------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...++..|+|||.+....++.++||||+|++++||++ |+.||.....    ..+...+             .
T Consensus       156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~-------------~  218 (258)
T smart00219      156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN----EEVLEYL-------------K  218 (258)
T ss_pred             ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH-------------h
Confidence                   1225688999999988889999999999999999998 7888865321    1111111             1


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      .......+......+.+++.+|++.+|++|||+.++++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      219 KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            1111122233566788899999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.5e-33  Score=294.81  Aligned_cols=238  Identities=28%  Similarity=0.343  Sum_probs=191.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.|+..+.||+|+||.||+|....++..||+|.+...    ....+++.+|++++++++||||+++.++|.+.+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4578889999999999999999888999999987642    223457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||++ |+|.+++.....   .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++..++.|..       
T Consensus        95 e~~~-g~l~~~~~~~~~---~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607          95 EYCL-GSASDILEVHKK---PLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             HhhC-CCHHHHHHHccc---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            9996 678777754332   38999999999999999999998   999999999999999999999998732       


Q ss_pred             -cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 -TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                       ....++..|+|||++.   .+.++.++||||||+++|||++|+.||........   +.    ....         ...
T Consensus       168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---~~----~~~~---------~~~  231 (307)
T cd06607         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LY----HIAQ---------NDS  231 (307)
T ss_pred             CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH---HH----HHhc---------CCC
Confidence             2235788999999874   45688999999999999999999999875432110   00    0000         000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...........+.+++..||+.+|++||++.++++.
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         232 PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            001122345678899999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.6e-33  Score=292.76  Aligned_cols=249  Identities=24%  Similarity=0.310  Sum_probs=200.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|...+.||+|+||.||+|....++..+++|.+.. .....+.+.+|+.++++++|||++++++.|...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            578888999999999999999887888999998865 3334567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++.+..     +++.++..++.|++.||.|||+   .+++||||||+||+++.++..++.|..          
T Consensus        99 ~~~~L~~~~~~~~-----l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          99 AGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             CCCcHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            9999999996532     7899999999999999999998   999999999999999999999997732          


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|+..|+|||.+....++.++||||||+++||+++|+.||...........+       ..        ......
T Consensus       171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~-------~~--------~~~~~~  235 (293)
T cd06647         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------AT--------NGTPEL  235 (293)
T ss_pred             ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh-------hc--------CCCCCC
Confidence              1235778899999998888999999999999999999999999754321111000       00        000001


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCCCCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEPLVVP  619 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~~~~p  619 (645)
                      .........+.+++..||..+|++||++++++..  +....+...+|
T Consensus       236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~  282 (293)
T cd06647         236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLT  282 (293)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccccccc
Confidence            1122334567889999999999999999999874  55555444443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.8e-33  Score=287.49  Aligned_cols=239  Identities=27%  Similarity=0.429  Sum_probs=194.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +|+..+.||+|++|.||+|....++..+|+|.+....       ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4777899999999999999998889999999886522       124678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~----  496 (645)
                      |+||+++++|.+++.+..    .+++.....++.|++.||+|||+   .+++|+||||+||+++.++ ..++.|..    
T Consensus        81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            999999999999997543    38899999999999999999999   9999999999999998775 47776621    


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ....|+..|+|||.+.+..++.++||||+|++++||++|+.||........    ....         
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~---------  220 (268)
T cd06630         154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH----LALI---------  220 (268)
T ss_pred             cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch----HHHH---------
Confidence                        123567899999999888899999999999999999999999964322111    1110         


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+..........+......+.+++..|++.+|.+||++.++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         221 FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            0111111122344455677888999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.2e-33  Score=289.86  Aligned_cols=241  Identities=26%  Similarity=0.387  Sum_probs=190.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----c-------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----E-------GKTEFLAELSIIACLRHKNLVQLLGWCAEKG  417 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~  417 (645)
                      +|...+.||+|+||.||+|....++..+|+|.+....    .       ..+.+.+|+.++++++|+|++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            3566789999999999999998889999999875311    0       1245788999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++||||+++++|.+++....    .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++..++.|.. 
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~  154 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGI  154 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccc
Confidence            9999999999999999997653    38999999999999999999998   899999999999999999999997722 


Q ss_pred             -------------cccccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          497 -------------TLTAGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~~~--~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                   ....|+..|+|||.+....  ++.++||||||+++||+++|..||.......   .+.    .....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~----~~~~~  227 (272)
T cd06629         155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA---AMF----KLGNK  227 (272)
T ss_pred             cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH---HHH----Hhhcc
Confidence                         1124778899999987654  7999999999999999999999986432111   111    00000


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                       ..    ...+...........+.+++..||+++|.+||++++|++.
T Consensus       228 -~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         228 -RS----APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             -cc----CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence             00    0011111122335678888999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1e-33  Score=295.83  Aligned_cols=241  Identities=19%  Similarity=0.260  Sum_probs=196.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++.....+..|++|.+....    .....+.+|+++++.++|+||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36888899999999999999999889999999876532    23457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc-----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-----  498 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~-----  498 (645)
                      ||+++++|.+++....    .+++.....++.|++.||+|||+   .+++||||||+||+++.++.+++.|....     
T Consensus        81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            9999999999997643    38999999999999999999999   99999999999999999999999773211     


Q ss_pred             ----------------------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          499 ----------------------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       499 ----------------------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                                            ..|+..|+|||.+....++.++||||||+++|||++|+.||.+....    .+...  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~----~~~~~--  227 (305)
T cd05609         154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----ELFGQ--  227 (305)
T ss_pred             CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH--
Confidence                                  24677899999999888999999999999999999999999753221    11110  


Q ss_pred             hhhccCchhHHhhhhcc-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          557 GLYAEGRIIEAADKRLN-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       557 ~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                ....... ..........+.+++.+||+.+|++||++.++.+.|+.
T Consensus       228 ----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         228 ----------VISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             ----------HHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence                      0000000 00111235567899999999999999998777777765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.4e-34  Score=301.73  Aligned_cols=189  Identities=28%  Similarity=0.374  Sum_probs=166.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..++||+|+||.||++....++..+|+|++.+.    ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4688889999999999999999988999999988642    223445888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.+...   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..       
T Consensus        81 ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            99999999999976432   38999999999999999999999   999999999999999999999998732       


Q ss_pred             ------cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          497 ------TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                            ....||+.|+|||++.     .+.++.++|||||||++|||++|+.||...
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~  211 (332)
T cd05623         155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (332)
T ss_pred             CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence                  1246899999999986     346889999999999999999999999754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-34  Score=300.00  Aligned_cols=189  Identities=28%  Similarity=0.387  Sum_probs=166.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..+|+|.+..    .....+.+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            468889999999999999999998899999999864    2223456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.+...   .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++..|+.|..       
T Consensus        81 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             ecCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999999975332   38899999999999999999999   999999999999999999999998722       


Q ss_pred             ------cccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          497 ------TLTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                            ....||+.|+|||++..     +.++.++|||||||++|||++|+.||...
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence                  11358999999999863     45788999999999999999999999754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-33  Score=286.35  Aligned_cols=243  Identities=24%  Similarity=0.307  Sum_probs=197.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|+||+||+|....++..+++|++...  ....+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4688899999999999999999888899999998653  23557899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++..... ...+++.....++.|++.||+|||+   .+++||||||+||++++++..++.|..         
T Consensus        81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG  156 (267)
T ss_pred             cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence            999999999976432 1248999999999999999999998   999999999999999999999997621         


Q ss_pred             -------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 -------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ....|+..|+|||.+... .++.++|||||||++|||++|+.||.......   .+.+....          .
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~~~~~~----------~  223 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---VLMLTLQN----------D  223 (267)
T ss_pred             cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---hHHHHhcC----------C
Confidence                   122578899999998877 78999999999999999999999997543211   11111100          0


Q ss_pred             hhhccCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAF-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+.+.... .......+.+++..||+.+|++||+++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11111111 1234567789999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.9e-34  Score=287.19  Aligned_cols=238  Identities=21%  Similarity=0.245  Sum_probs=196.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .|+..+.||+|.-|+||++.+..++...|+|++.+.    .........|-+||+.+.||.+..|++.++.++..||+||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            345568899999999999999999999999999873    2334557789999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec----------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----------  494 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d----------  494 (645)
                      ||+||+|...++++..  ..++...+.-.+..|+-||+|||-   .|||.|||||+||||.++|.+-+.|          
T Consensus       158 yCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             cCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            9999999999876543  458999999999999999999999   9999999999999997776655543          


Q ss_pred             ----------------------------------------------------------cccccccCCcccCcccccCCCC
Q 041096          495 ----------------------------------------------------------SFTLTAGTMGYLAPEYLQYGTA  516 (645)
Q Consensus       495 ----------------------------------------------------------~~~~~~gt~~y~APE~~~~~~~  516 (645)
                                                                                .....+||..|+|||++.+...
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                                                      0011368999999999999999


Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCC
Q 041096          517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDS  596 (645)
Q Consensus       517 t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP  596 (645)
                      +.++|+|+|||+||||+.|..||.+.+..+...                .++.+.+.-.-..+....+.+|+...+.+||
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~----------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP  376 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR----------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDP  376 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH----------------HHhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence            999999999999999999999998865543322                2333333222222456778889999999999


Q ss_pred             CCCCC----HHHHHH
Q 041096          597 SARPS----MRRVFQ  607 (645)
Q Consensus       597 ~~RPt----~~~vl~  607 (645)
                      ++|..    +.||.+
T Consensus       377 ~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  377 SKRLGSKRGAAEIKR  391 (459)
T ss_pred             hhhhccccchHHhhc
Confidence            99998    777765

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=8.3e-34  Score=285.44  Aligned_cols=256  Identities=21%  Similarity=0.290  Sum_probs=199.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCC-eeeeeeeeeeCC------e
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKN-LVQLLGWCAEKG------E  418 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~------~  418 (645)
                      .|...++||+|.||+||+|....+|..||+|++....+   ......+|+.++++|+|+| ||+|++++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            45556779999999999999999999999999876433   3456789999999999999 999999998877      7


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec----
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----  494 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d----  494 (645)
                      +++|+||+ .-+|..++.........++...+..++.|+++||+|||+   ++|+||||||+||||++++..|+.|    
T Consensus        92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence            89999999 669999998765322347778899999999999999999   9999999999999999999999988    


Q ss_pred             --------cccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC---
Q 041096          495 --------SFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG---  562 (645)
Q Consensus       495 --------~~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~---  562 (645)
                              ..+..++|..|+|||++.+. .|+...||||+||++.||++++..|.+..+.+    ....+.......   
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~----ql~~If~~lGtP~e~  243 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID----QLFRIFRLLGTPNEK  243 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH----HHHHHHHHcCCCCcc
Confidence                    24456789999999999886 68999999999999999999998888765422    222222221111   


Q ss_pred             ---chhHHhhhhc--c-----CCCCHHHH---HHHHHHHHHccCCCCCCCCCHHHHHHH--HcCC
Q 041096          563 ---RIIEAADKRL--N-----GAFNEDEM---KRLLLVGLSCANPDSSARPSMRRVFQI--LNNE  612 (645)
Q Consensus       563 ---~~~~~~d~~l--~-----~~~~~~~~---~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~  612 (645)
                         .+....+-..  .     ..+.....   ....+++.+|++.+|.+|.|++.++++  +...
T Consensus       244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence               0111111110  0     00111111   367888899999999999999999985  5544

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.1e-33  Score=287.13  Aligned_cols=237  Identities=26%  Similarity=0.379  Sum_probs=193.1

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|...+.||+|+||.||+|....++..+|+|.+...   ....+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            477789999999999999999988999999987653   23456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-eeeeccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-ARLESSF--------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-~kl~d~~--------  496 (645)
                      +++++|.+++.....  ..+++..+..++.|+++||+|||+   .+++|+||||+||++++++. .++++..        
T Consensus        81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            999999999975432  347999999999999999999998   99999999999999998754 5776621        


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....|+..|+|||+.....++.++||||||+++|||++|+.||......       ++....         ....+
T Consensus       156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~---------~~~~~  219 (257)
T cd08225         156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-------QLVLKI---------CQGYF  219 (257)
T ss_pred             cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHH---------hcccC
Confidence                1235788899999998888999999999999999999999998653211       111111         11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       ..........+.+++.+||+.+|++|||+.++++
T Consensus       220 -~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         220 -APISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             -CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence             1112233456888899999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=7.7e-34  Score=294.98  Aligned_cols=233  Identities=24%  Similarity=0.305  Sum_probs=189.9

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ...||+|+||.||++....++..+|||.+... ....+.+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            45699999999999999888999999988653 33456788999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------ccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------TLT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~~~  499 (645)
                      .+++...     .+++.+...++.|++.||+|||+   .+++||||||+||+++.++..++.|..            ...
T Consensus       107 ~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  178 (292)
T cd06658         107 TDIVTHT-----RMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL  178 (292)
T ss_pred             HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence            9988542     28899999999999999999999   899999999999999999999998732            123


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      .|+..|+|||.+....++.++||||||+++|||++|+.||.......    ....         +.....+.+..  ...
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~~~---------~~~~~~~~~~~--~~~  243 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ----AMRR---------IRDNLPPRVKD--SHK  243 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH---------HHhcCCCcccc--ccc
Confidence            57889999999988889999999999999999999999997532211    1110         00111111111  112


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ....+..++..||..+|++|||++++++.
T Consensus       244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         244 VSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            33457778899999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=2.3e-33  Score=285.88  Aligned_cols=236  Identities=28%  Similarity=0.421  Sum_probs=193.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|...+.||+|+||.||+|....++..+++|.+.....   ..+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            46778899999999999999988899999999876433   567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....    .+++..+..++.|+++||+|||+   .+++|+||+|+||+++.++.+++.|..         
T Consensus        81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~  153 (264)
T cd06626          81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT  153 (264)
T ss_pred             CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence            99999999997643    37899999999999999999999   999999999999999999999997721         


Q ss_pred             -------cccccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 -------TLTAGTMGYLAPEYLQYGT---ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~---~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                             ....++..|+|||++....   .+.++||||||+++||+++|+.||.......   ......   .       
T Consensus       154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~~---~-------  220 (264)
T cd06626         154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFHV---G-------  220 (264)
T ss_pred             CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHHH---h-------
Confidence                   1234678999999998766   8999999999999999999999997542111   010000   0       


Q ss_pred             HhhhhccCCCCHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNGAFNED--EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~~~~~~--~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                         .......+..  ....+.+++..||+.+|.+||++++++.
T Consensus       221 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         221 ---AGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ---cCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence               0001111221  2556778899999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.3e-33  Score=290.12  Aligned_cols=241  Identities=28%  Similarity=0.369  Sum_probs=199.6

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ..+++|+..+.||+|++|.||+|.....+..+++|.+.......+.+.+|++++++++|+|++++++.+...+..++|+|
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            34567888889999999999999998788999999987754456788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++....   ..+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++..++.|..        
T Consensus        96 ~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  169 (286)
T cd06614          96 YMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE  169 (286)
T ss_pred             ccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence            999999999998754   249999999999999999999999   999999999999999999999997732        


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....++..|+|||.+.+..++.++||||||+++|||++|+.||........   ...             ......
T Consensus       170 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~---~~~-------------~~~~~~  233 (286)
T cd06614         170 KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA---LFL-------------ITTKGI  233 (286)
T ss_pred             hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH---HHH-------------HHhcCC
Confidence                122467889999999988899999999999999999999999865322110   000             000001


Q ss_pred             c-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 N-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      . ..........+.+++.+||+.+|.+||++.++++
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         234 PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            0 0111224567888999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.2e-33  Score=293.27  Aligned_cols=253  Identities=20%  Similarity=0.258  Sum_probs=193.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|....++..+++|.++...   .....+.+|+.++.+++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46788899999999999999999889999999886532   2234577899999999999999999998877  789999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||++ ++|.+++.....   .+++.....++.|++.||+|||+   .+++|+||||+||+++.++.+++.|..      
T Consensus        85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~  157 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYG  157 (293)
T ss_pred             ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence            99996 599998876433   48999999999999999999999   899999999999999999999998721      


Q ss_pred             ------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhcc-
Q 041096          497 ------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYAE-  561 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~~-  561 (645)
                            ....++..|+|||.+.+. .++.++||||||+++|||++|+.||...........+....       |..+.. 
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (293)
T cd07843         158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL  237 (293)
T ss_pred             CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence                  223467889999998764 46899999999999999999999997643322111111110       000000 


Q ss_pred             -----CchhHHhhhhccCCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 -----GRIIEAADKRLNGAFNED-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 -----~~~~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           ..........+...++.. ....+.+++..||+.+|++|||+.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                 000000111111222222 3566788999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.9e-34  Score=282.44  Aligned_cols=253  Identities=21%  Similarity=0.282  Sum_probs=194.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch---hHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~---~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV  422 (645)
                      ++|+..+.|++|.||.||+|+++.+++.||+|+++...+.   .-.-++||.+|.+++|||||.+-.+...  -+.+|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            3567788999999999999999999999999999874422   2356899999999999999999877654  3579999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec--------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES--------  494 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d--------  494 (645)
                      ||||+ -+|...+....+   ++...+...++.|+++|++|||.   +-|+|||||++|+|+...+..|+.|        
T Consensus       156 Me~~E-hDLksl~d~m~q---~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  156 MEYVE-HDLKSLMETMKQ---PFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             HHHHH-hhHHHHHHhccC---CCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhc
Confidence            99995 489999987653   48888999999999999999999   9999999999999999999999988        


Q ss_pred             ----cccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH-------HHhhhccC
Q 041096          495 ----SFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW-------VWGLYAEG  562 (645)
Q Consensus       495 ----~~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~-------~~~~~~~~  562 (645)
                          ..+..+.|.+|+|||.+.+. .|++..|+||+|||+.|++++++.|.+..+.+....+...       .|.-+..-
T Consensus       229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence                24445779999999999875 5899999999999999999999999876543322222211       11111111


Q ss_pred             chhHHh------hhhccCCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEAA------DKRLNGAFNED-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~------d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .....+      -..++..+... ..+.-+++....+..||.+|-|++|.++
T Consensus       309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            111000      01111122111 2355667778889999999999999986

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=6.2e-34  Score=301.16  Aligned_cols=241  Identities=22%  Similarity=0.262  Sum_probs=187.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..+|+|.+...    ......+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999999988999999988652    223445888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+|+.|..       
T Consensus        81 Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          81 DYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             eCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            99999999999976432   38899999999999999999999   999999999999999999999998732       


Q ss_pred             ------cccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 ------TLTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                            ....||+.|+|||++.+     +.++.++|||||||+||||++|+.||........    ..   .........
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~---~i~~~~~~~  227 (331)
T cd05624         155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YG---KIMNHEERF  227 (331)
T ss_pred             CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH----HH---HHHcCCCcc
Confidence                  12358999999999875     5678999999999999999999999975432111    10   000000000


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA--RPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~  607 (645)
                           .+ .....+..+.+.+++..|+..++.+  |++++++++
T Consensus       228 -----~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         228 -----QF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             -----cC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence                 00 0111122455666777777755544  568888865

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=5.1e-33  Score=288.20  Aligned_cols=252  Identities=19%  Similarity=0.246  Sum_probs=191.4

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++++|...+.||+|+||.||+|....++..+++|++....  .....+.+|+.+++.++|+||+++++++..++..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4678999999999999999999998889999999986532  23346789999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+. ++|.+++.....   .+.+.++..++.|+++||+|||+   .+++||||||+||+++.++..+++|..       
T Consensus        83 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  155 (291)
T cd07870          83 EYMH-TDLAQYMIQHPG---GLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSI  155 (291)
T ss_pred             eccc-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence            9995 788777754332   37888899999999999999999   899999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC--------
Q 041096          497 -----TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG--------  562 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~--------  562 (645)
                           ....++..|+|||.+.+. .++.++|||||||++|||++|+.||......   .......+......        
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07870         156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV---FEQLEKIWTVLGVPTEDTWPGV  232 (291)
T ss_pred             CCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHHHHHHcCCCChhhhhhh
Confidence                 123468889999998764 5789999999999999999999999754321   11111111111000        


Q ss_pred             ----chhHHhhhhc-cCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 ----RIIEAADKRL-NGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ----~~~~~~d~~l-~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ...+...... ....     .......+.+++..|+..||++|||+.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                0000000000 0000     0011356778889999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.2e-33  Score=286.26  Aligned_cols=243  Identities=26%  Similarity=0.367  Sum_probs=197.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|++|.||++....++..+++|++...  ....+++.+|++++++++|+||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            3567788999999999999999988999999988763  34456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      +++++|.+++....   ..++......++.|++.||+|||+  ..+++|+||||+||+++.++..++.|...        
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            99999999997653   248899999999999999999997  37999999999999999999999987321        


Q ss_pred             --ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          498 --LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                        ...++..|+|||.+.+..++.++||||||+++|||++|+.||........  ...+....         ..... ...
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~---------~~~~~-~~~  223 (265)
T cd06605         156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD--GIFELLQY---------IVNEP-PPR  223 (265)
T ss_pred             hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc--cHHHHHHH---------HhcCC-CCC
Confidence              14578899999999999999999999999999999999999976432111  11111100         01110 111


Q ss_pred             CCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          576 FNED-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       576 ~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+.. ....+.+++..||..+|++|||+.+++.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            2222 4566889999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.2e-33  Score=288.32  Aligned_cols=253  Identities=20%  Similarity=0.293  Sum_probs=193.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +|+..+.||+|++|.||+|+...++..+|+|.+....  .....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5778899999999999999999889999999887632  23456788999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      + ++|.+++..... ...+++.++..++.|+++||+|||+   .+++||||||+||++++++..++.|..          
T Consensus        81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          81 D-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             C-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            7 489888865442 2348999999999999999999998   899999999999999999999997721          


Q ss_pred             --cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh-hhc
Q 041096          497 --TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD-KRL  572 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d-~~l  572 (645)
                        ....++..|++||.+.+ ..++.++|||||||++|||++|+.||...+..+....+.+.. ............+ +.+
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  234 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM-GTPTESTWPGISQLPEY  234 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh-CCCChhhHHHHhcCchh
Confidence              22356888999998865 457899999999999999999999997654322211111110 0000000000000 000


Q ss_pred             c-----------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 N-----------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~-----------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .           ....+.....+.+++..|++.+|.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0           0111223456788999999999999999999975

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=3.6e-33  Score=284.22  Aligned_cols=241  Identities=25%  Similarity=0.385  Sum_probs=200.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|++|.||++....++..+++|++....  .....+.+|++.+.+++|+||+++++++...+..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36788899999999999999999889999999887643  3467899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....    .+++..++.++.|+++||+|||+.  .+++||||+|+||+++.++..++.|..         
T Consensus        81 ~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          81 MDGGSLADLLKKVG----KIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            99999999997653    389999999999999999999962  799999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....++..|+|||.+....++.++||||||+++|||++|+.||...... .......+..             ....
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~-------------~~~~  220 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-SFFELMQAIC-------------DGPP  220 (264)
T ss_pred             CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-CHHHHHHHHh-------------cCCC
Confidence               1235778999999999989999999999999999999999999765321 1111221111             1111


Q ss_pred             CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          574 GAFNED-EMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       574 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...+.. ....+.+++..||+++|++||++.++++.
T Consensus       221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            123333 56788999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-34  Score=302.97  Aligned_cols=228  Identities=26%  Similarity=0.305  Sum_probs=179.7

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhc---CCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACL---RHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ||+|+||+||+|....++..+|+|++....    .....+..|..++.++   +||||+++++++.+.+..|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999999889999999986521    2233455677777665   699999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|..++....    .+++..+..++.||++||+|||+   ++|+||||||+|||++.++..++.|..            
T Consensus        81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~  153 (330)
T cd05586          81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT  153 (330)
T ss_pred             ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence            99999987543    38999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....||..|+|||.+.+. .++.++|||||||++|||++|+.||.......    +...    ...+.      ..+.  
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~----~~~~----i~~~~------~~~~--  217 (330)
T cd05586         154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ----MYRN----IAFGK------VRFP--  217 (330)
T ss_pred             cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH----HHHH----HHcCC------CCCC--
Confidence            123589999999998765 47999999999999999999999997643211    1110    00000      0111  


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARP----SMRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RP----t~~~vl~  607 (645)
                       .......+.+++..||+.+|.+||    ++.++++
T Consensus       218 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         218 -KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             -CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence             011244567888999999999998    4666655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.4e-33  Score=287.52  Aligned_cols=243  Identities=25%  Similarity=0.395  Sum_probs=190.8

Q ss_pred             CCcCceeccCCceEEEEEEECC---CCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------
Q 041096          350 FHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------  417 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------  417 (645)
                      |...++||+|+||.||+|.+..   ++..+|||++...   ....+++.+|++++++++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            4567889999999999998643   4688999988653   234567889999999999999999999886532      


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC--CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ..++++||+++|+|..++.....  ....+++...++++.|++.||+|||+   .+++||||||+||+++.++.+++.|.
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            24789999999999988754321  12247899999999999999999998   89999999999999999999999773


Q ss_pred             cc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhc
Q 041096          496 FT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       496 ~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      ..              ...++..|++||.+....++.++||||||+++|||++ |+.||......    .+..+...   
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~----~~~~~~~~---  230 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS----EIYNYLIK---  230 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH----HHHHHHHc---
Confidence            21              1123467999999998889999999999999999999 88888654321    11111110   


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       ..         ....+......+.+++.+||+.+|.+||++.++++.|+++
T Consensus       231 -~~---------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         231 -GN---------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             -CC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             00         0011223456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=3.8e-33  Score=288.63  Aligned_cols=235  Identities=23%  Similarity=0.311  Sum_probs=191.9

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      |...+.||+|++|.||++....++..+++|++.... ...+.+.+|+.+++.++|+||+++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            444578999999999999998888999999876532 3355688999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      ++|.+++...     .+++..+..++.|++.||+|||+   .+++||||+|+||+++.++..++.|..            
T Consensus       101 ~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~  172 (285)
T cd06648         101 GALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR  172 (285)
T ss_pred             CCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence            9999998762     28999999999999999999999   999999999999999999999998732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ....|+..|+|||.+.+..++.++||||||+++|||++|+.||......    .......         ....+.+  ..
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~----~~~~~~~---------~~~~~~~--~~  237 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL----QAMKRIR---------DNLPPKL--KN  237 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHH---------hcCCCCC--cc
Confidence            1135788999999999888999999999999999999999998653221    1111000         0000111  01


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .......+.+++.+||+.+|++||++.++++
T Consensus       238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            1124467899999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=5.3e-33  Score=292.15  Aligned_cols=245  Identities=26%  Similarity=0.328  Sum_probs=194.5

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      |...+.||+|+||.||+|....++..+|+|.+...    ......+.+|++++++++|+|+++++++|.+++..++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            56678899999999999999888999999987642    22345688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------c
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------T  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------~  497 (645)
                      ++ |+|.+++.....   .++|.++..++.|++.||.|||+   .+++||||+|+||+++.++..++.|..        .
T Consensus       107 ~~-g~l~~~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (317)
T cd06635         107 CL-GSASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN  179 (317)
T ss_pred             CC-CCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence            96 588877764332   38999999999999999999999   999999999999999999999998732        2


Q ss_pred             ccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          498 LTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       498 ~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      ...|+..|+|||++.   .+.++.++|||||||++|||++|+.||........   +..             ........
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~-------------~~~~~~~~  243 (317)
T cd06635         180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYH-------------IAQNESPT  243 (317)
T ss_pred             cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHH-------------HHhccCCC
Confidence            335788999999974   45689999999999999999999999865321111   111             11111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      .........+.+++.+||+.+|.+||++.++++.+--....+.
T Consensus       244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence            1122345568889999999999999999999986554444443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-33  Score=287.34  Aligned_cols=235  Identities=26%  Similarity=0.392  Sum_probs=190.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .|+..+.||+|+||.||+|....++..+++|.+...  .....++.+|+.++++++   |+|++++++++.++...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            466778899999999999999888999999987653  334567889999999997   999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++...     .+++...+.++.|++.||.|||+   .+++|+||+|+||+++.++..++.|..       
T Consensus        82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            999999999998643     38999999999999999999998   999999999999999999999997721       


Q ss_pred             -----cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....|+..|+|||.+.++ .++.++||||||+++|||++|+.||.......       ... .....     ..+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-------~~~-~~~~~-----~~~  220 (277)
T cd06917         154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-------AMM-LIPKS-----KPP  220 (277)
T ss_pred             CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-------hhh-ccccC-----CCC
Confidence                 123578889999988754 46899999999999999999999997542211       000 00000     001


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+..   ......+.+++..||+.+|++||++.++++
T Consensus       221 ~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         221 RLED---NGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             CCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            1111   114456888999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.7e-33  Score=303.11  Aligned_cols=248  Identities=21%  Similarity=0.220  Sum_probs=189.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECC--CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS--SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .+|...+.||+|+||.||++...+  .+..||+|.+...    ....+|++++++++|+||+++++++......++||||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~  167 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK  167 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence            468889999999999999997643  4578899987653    2456899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +. ++|.+++....    .+++.+++.++.|++.||+|||+   .+|+||||||+||||+.++.+++.|..         
T Consensus       168 ~~-~~l~~~l~~~~----~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        168 YK-CDLFTYVDRSG----PLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             cC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence            94 78988884332    38999999999999999999999   999999999999999999999998732         


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc-------C--
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE-------G--  562 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~-------~--  562 (645)
                           ....||..|+|||++....++.++|||||||++|||++|+.||...........+.... .....       .  
T Consensus       240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~-~~~~~~~~~~~~~~~  318 (392)
T PHA03207        240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSII-RCMQVHPLEFPQNGS  318 (392)
T ss_pred             ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHH-HHhccCccccCCccc
Confidence                 12358999999999999999999999999999999999999997654322111111111 10000       0  


Q ss_pred             -chhHHhh---hhccCCCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          563 -RIIEAAD---KRLNGAFN-------EDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       563 -~~~~~~d---~~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                       .+.+.+.   ...+..+.       ......+.+++..|++.+|++|||+.+++..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence             0001110   00111111       0123456778899999999999999999874

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.4e-33  Score=293.75  Aligned_cols=232  Identities=23%  Similarity=0.293  Sum_probs=189.6

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ...||+|+||.||++....++..+|+|.+.. .....+.+.+|+.++..++||||+++++.+..++..++|+||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            3469999999999999988899999999865 333456788999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------ccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------TLT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~~~  499 (645)
                      ..++...     .+++.+++.++.|++.||+|||+   .+++||||||+||+++.++..++.|..            ...
T Consensus       106 ~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  177 (297)
T cd06659         106 TDIVSQT-----RLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  177 (297)
T ss_pred             HHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence            9987542     28999999999999999999998   999999999999999999999998721            224


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      .|+..|+|||++.+..++.++|||||||++|||++|+.||.......    ........    .     .+..  .....
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~----~-----~~~~--~~~~~  242 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ----AMKRLRDS----P-----PPKL--KNAHK  242 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcc----C-----CCCc--cccCC
Confidence            57889999999998889999999999999999999999997533211    11111000    0     0000  11112


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ....+.+++..||+.+|++||+++++++
T Consensus       243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         243 ISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            3445778899999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.1e-33  Score=287.69  Aligned_cols=236  Identities=26%  Similarity=0.315  Sum_probs=196.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +|+..+.||+|+||.||+|....++..+|+|.+....    ...+.+.+|++++++++||||+++++.+.+.+..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5778899999999999999998889999999886532    345789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++....    .+++..+..++.|+++||.|||+   ++++|+||||+||++++++..++.|..        
T Consensus        81 ~~~~~~L~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          81 LLLGGDLRYHLSQKV----KFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             CCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            999999999997652    38999999999999999999998   999999999999999999999997721        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|+..|+|||.+....++.++||||||+++|||++|+.||......     ...+...         .... ..
T Consensus       154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~---------~~~~-~~  218 (258)
T cd05578         154 TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRA---------KQET-AD  218 (258)
T ss_pred             ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHH---------Hhcc-cc
Confidence               2345788899999999888999999999999999999999999765431     1111111         1110 11


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSM--RRVF  606 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~--~~vl  606 (645)
                      ...+...+..+.+++..||+.+|.+||++  +|++
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            23344455788899999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.7e-33  Score=290.54  Aligned_cols=249  Identities=20%  Similarity=0.245  Sum_probs=193.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.||+|....++..+++|++...   ......+.+|+.++++++|+||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            467788999999999999999888999999988753   23356799999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc----------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS----------  495 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~----------  495 (645)
                      + +++|.+++....   ..+++.++..++.|+++||+|||+   .+++|+||||+||+++.++..++.|.          
T Consensus        81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence            9 999999987544   248999999999999999999999   99999999999999999999998762          


Q ss_pred             ---ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch-------
Q 041096          496 ---FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI-------  564 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~-------  564 (645)
                         .....|+..|+|||.+.+. .++.++||||+|++++||++|+.||.......    ...++.........       
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07832         154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE----QLAIVFRTLGTPNEETWPGLT  229 (286)
T ss_pred             CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH----HHHHHHHHcCCCChHHHhhcc
Confidence               1234578899999998654 46899999999999999999988776543211    11111111110000       


Q ss_pred             --hHH---hhhhcc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          565 --IEA---ADKRLN----GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       565 --~~~---~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        .+.   ..+.-.    .....+....+.+++.+|++.+|++||+++++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence              000   000000    00111234778899999999999999999999863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=9.3e-33  Score=290.00  Aligned_cols=185  Identities=22%  Similarity=0.306  Sum_probs=152.6

Q ss_pred             CceeccCCceEEEEEEECC--CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEEEecCCC
Q 041096          353 NRILGRGAFGNVYKAYFAS--SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLVYEYMPN  428 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~  428 (645)
                      .++||+|+||.||+|....  ++..+|+|.+.... ....+.+|++++++++||||+++++++..  +...+++|||+. 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence            4679999999999999753  56789999886533 23457899999999999999999998854  457899999995 


Q ss_pred             CCHhHHhhhcCC-----CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----cCCCCeeeeccc---
Q 041096          429 GSLDRMLYQDSE-----NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML----DANFNARLESSF---  496 (645)
Q Consensus       429 gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll----d~~~~~kl~d~~---  496 (645)
                      ++|.+++.....     ....+++..+..++.|++.||+|||+   .+|+||||||+|||+    +.++.+|++|..   
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            588888753321     12348899999999999999999999   999999999999999    455778887721   


Q ss_pred             ------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          497 ------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                                  ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence                        12467889999999876 45899999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=3.2e-33  Score=283.21  Aligned_cols=240  Identities=24%  Similarity=0.347  Sum_probs=199.9

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|++|.||++....++..+++|.+...   .....++.+|++++++++|+||+++.+++.+....++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            477788999999999999999888999999988652   33456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.+.......+++..++.++.|++.||+|||+   .+++|+||+|+||+++.++..++.|..         
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            99999999997754434558999999999999999999998   999999999999999999999997721         


Q ss_pred             -cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 -TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                       ....++..|++||.+.+..++.++|+||||+++|||++|+.||...+..    .+..             .........
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~-------------~~~~~~~~~  220 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ----DLRY-------------KVQRGKYPP  220 (256)
T ss_pred             cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH-------------HHhcCCCCC
Confidence             1235788999999999989999999999999999999999999754321    1111             111111223


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .+......+.+++..|++.+|++||++.++++.
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            334556778999999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=290.55  Aligned_cols=252  Identities=22%  Similarity=0.274  Sum_probs=191.0

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |+..+.||+|++|.||+|....++..+|+|++....   .....+.+|++++++++|+|++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            566788999999999999998889999999886532   23457889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                       +++|.+++.....  ..+++..++.++.|+++||+|||+   ++++||||+|+||+++.++..++.|..          
T Consensus        81 -~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          81 -DLDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             -CcCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence             4799999876542  248999999999999999999999   999999999999999999999998721          


Q ss_pred             --cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhc-cCchh
Q 041096          497 --TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYA-EGRII  565 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~-~~~~~  565 (645)
                        ....++..|+|||++.+. .++.++||||||+++|||++|+.||...........+.++.       |.... .....
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK  234 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence              122457889999988664 57899999999999999999999997643221111111110       00000 00000


Q ss_pred             HHhhhh---ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKR---LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......   ............+.+++.+|++++|++|||++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000   000011122356788999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=3.4e-33  Score=295.07  Aligned_cols=246  Identities=24%  Similarity=0.327  Sum_probs=187.7

Q ss_pred             ceeccC--CceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRG--AFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G--~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ..||+|  +||+||++.+..++..||+|+.....   ...+.+.+|+.+++.++||||++++++|..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  89999999998889999999986532   2346788999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----------  497 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----------  497 (645)
                      ++|.+++.....  ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++..++.+...           
T Consensus        84 ~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~  158 (328)
T cd08226          84 GSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA  158 (328)
T ss_pred             CCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence            999999876532  238899999999999999999998   9999999999999999998888865210           


Q ss_pred             --------ccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh--------
Q 041096          498 --------LTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY--------  559 (645)
Q Consensus       498 --------~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~--------  559 (645)
                              ...++..|+|||++.+.  .++.++|||||||++|||++|+.||.........   ........        
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~  235 (328)
T cd08226         159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML---LQKLKGPPYSPLDITT  235 (328)
T ss_pred             cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH---HHHhcCCCCCCccccc
Confidence                    11235569999999764  4789999999999999999999999764321111   11000000        


Q ss_pred             ---------------cc---------CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 ---------------AE---------GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ---------------~~---------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                     ..         .......+..+...........+.+++..||+.||++|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                           00         0000011111222223345677899999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-34  Score=302.84  Aligned_cols=238  Identities=26%  Similarity=0.437  Sum_probs=198.5

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHh
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD  432 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  432 (645)
                      -+||+|.||+||-|++..+...+|||-+.. ..+..+-..+||.+.++|+|+|||+++|.|.+++.+-|.||-+|||||.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            369999999999999999999999998876 4455677899999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCccC--CHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc------------c
Q 041096          433 RMLYQDSENGVLL--SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF------------T  497 (645)
Q Consensus       433 ~~l~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~------------~  497 (645)
                      ..|...-+.   +  .....-...+||++||.|||+   +.|||||||-+||||+. .|..||+|..            .
T Consensus       661 sLLrskWGP---lKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE  734 (1226)
T KOG4279|consen  661 SLLRSKWGP---LKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE  734 (1226)
T ss_pred             HHHHhccCC---CccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence            999876542   4  567777889999999999999   99999999999999964 5677887733            2


Q ss_pred             ccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          498 LTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ...||..|||||++..+  .|..++|||||||.+.||+||++||.........               +.++-.-+....
T Consensus       735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---------------MFkVGmyKvHP~  799 (1226)
T KOG4279|consen  735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---------------MFKVGMYKVHPP  799 (1226)
T ss_pred             ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---------------hhhhcceecCCC
Confidence            34699999999999865  4899999999999999999999999765432211               111112233456


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .+++.......+++.|+.++|.+||+++++++  +|+..
T Consensus       800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            77888888999999999999999999999987  55533

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-33  Score=287.96  Aligned_cols=251  Identities=24%  Similarity=0.329  Sum_probs=191.7

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEEEe
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLVYE  424 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E  424 (645)
                      |+..+.||+|++|.||+|....++..+|+|++...   ......+.+|++++++++|+|++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            55678899999999999999988999999998764   23345788999999999999999999999988  78999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      |++ ++|.+++....   ..+++.+++.++.|+++||+|||+   .+++|+||||+||++++++.+++.|.         
T Consensus        81 ~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          81 YMD-HDLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             ccc-ccHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            997 48998886543   248999999999999999999999   89999999999999999999999772         


Q ss_pred             ----ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh-------hcc--
Q 041096          496 ----FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL-------YAE--  561 (645)
Q Consensus       496 ----~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~-------~~~--  561 (645)
                          .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.......       ...  
T Consensus       154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07840         154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP  233 (287)
T ss_pred             CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence                122356778999998765 457999999999999999999999997654322111111110000       000  


Q ss_pred             ----CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 ----GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ----~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ..........+...+...+...+.+++..||+.+|.+||+++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                0000000001111111113567889999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=5.1e-33  Score=288.29  Aligned_cols=235  Identities=23%  Similarity=0.300  Sum_probs=194.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..+|+|.+...    ......+.+|++++++++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4678889999999999999999888999999988652    233466889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++....    .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++..++.|..       
T Consensus        81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            9999999999997653    38999999999999999999999   999999999999999999999997721       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....|++.|+|||.+.+...+.++||||||+++|||++|+.||......    ....            ......  .
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~------------~~~~~~--~  215 (290)
T cd05580         154 RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QIYE------------KILEGK--V  215 (290)
T ss_pred             CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHH------------HHhcCC--c
Confidence              2235788999999998888999999999999999999999999754311    1110            001111  1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ..+......+.+++..||..+|.+||     +++++++
T Consensus       216 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         216 RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            22333456778899999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=6.4e-33  Score=280.71  Aligned_cols=239  Identities=29%  Similarity=0.397  Sum_probs=199.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|+||.||++....++..+++|++....   ...+.+.+|++++++++|+|++++.+.+..++..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777889999999999999998889999999987632   4566789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.........+++..+..++.++++||.|||+   .+++|+||+|+||+++.++..++.|..         
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999998764334559999999999999999999999   899999999999999999999997721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|++.|+|||......++.++||||+|++++||++|+.||......    .+...             ......
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~-------------~~~~~~  220 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL----ELALK-------------ILKGQY  220 (258)
T ss_pred             ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH----HHHHH-------------HhcCCC
Confidence               1235788899999999888999999999999999999999998654311    11110             001111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+......+.+++.+||..+|++||++.++++
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            2223344567888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=3.5e-33  Score=289.77  Aligned_cols=255  Identities=20%  Similarity=0.271  Sum_probs=190.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCe-----
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGE-----  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~-----  418 (645)
                      ++|+..+.||+|+||.||+|....++..||+|......   .....+.+|+.++++++ |+||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888899999999999999999889999999876532   23457889999999995 6999999999887665     


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC-CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~  496 (645)
                      .|+||||+++ +|.+++...... ...+++..++.++.||+.||+|||+   .+++||||||+||+++. ++.+++.|..
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999975 898888654332 3458999999999999999999999   99999999999999998 8888997732


Q ss_pred             c------------ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC-
Q 041096          497 T------------LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG-  562 (645)
Q Consensus       497 ~------------~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~-  562 (645)
                      .            ...+++.|+|||++.+ ..++.++||||||+++|||++|..||...........+..... ..... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~  235 (295)
T cd07837         157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG-TPTEQV  235 (295)
T ss_pred             cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC-CCChhh
Confidence            1            1245778999998865 4579999999999999999999999976433221111111100 00000 


Q ss_pred             --chhHHhh----hhcc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 --RIIEAAD----KRLN----GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 --~~~~~~d----~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ...+..+    +...    ....+.....+.+++..||+++|.+||++++++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence              0000000    0000    0001123456788999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4.7e-33  Score=286.60  Aligned_cols=246  Identities=22%  Similarity=0.248  Sum_probs=187.3

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeC--CeEEEEEe
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEK--GELLLVYE  424 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~--~~~~lV~E  424 (645)
                      |+..+.||+|+||.||+|....++..+|+|+++..  ........+|+.++.++. |+|++++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            45678899999999999999888999999988763  223344567899999985 99999999999987  88999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |++ ++|.+++.....   .++|.++..++.|++.||+|||+   .+++||||||+||+++. +..++.|..        
T Consensus        81 ~~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          81 LMD-MNLYELIKGRKR---PLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             cCC-ccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence            996 688888865432   48999999999999999999999   89999999999999999 899997721        


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC--chhHHhhh
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG--RIIEAADK  570 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~d~  570 (645)
                         ....++..|+|||.+.. +.++.++|||||||++|||++|..||...+..+.    ..+........  ...+....
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  228 (282)
T cd07831         153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ----IAKIHDVLGTPDAEVLKKFRK  228 (282)
T ss_pred             CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH----HHHHHHHcCCCCHHHHHhhcc
Confidence               22347888999997654 5578999999999999999999999976443221    11111111000  00000000


Q ss_pred             hccC--C-----------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNG--A-----------FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~--~-----------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .-..  .           ........+.+++..||+++|++||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            0000  0           01234578899999999999999999999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.7e-32  Score=287.70  Aligned_cols=185  Identities=21%  Similarity=0.309  Sum_probs=151.9

Q ss_pred             CceeccCCceEEEEEEECC--CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEEEecCCC
Q 041096          353 NRILGRGAFGNVYKAYFAS--SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLVYEYMPN  428 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~  428 (645)
                      .++||+|+||.||+|...+  .+..+|+|.+.... ....+.+|++++++++||||+++++++..  +...++|+||+. 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            3579999999999999754  45789999886533 23467899999999999999999998854  457899999986 


Q ss_pred             CCHhHHhhhcC-----CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----cCCCCeeeeccc---
Q 041096          429 GSLDRMLYQDS-----ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML----DANFNARLESSF---  496 (645)
Q Consensus       429 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll----d~~~~~kl~d~~---  496 (645)
                      ++|.+++....     .....+++..+..++.|++.||.|||+   .+++||||||+|||+    +.++..||+|..   
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            57877775321     112348899999999999999999999   999999999999999    556778887721   


Q ss_pred             ------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          497 ------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                                  ....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence                        12357889999999876 45799999999999999999999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-33  Score=317.40  Aligned_cols=246  Identities=27%  Similarity=0.424  Sum_probs=204.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-------CCeEEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-------SGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      ++....+.||+|.||.|++|....       ....||||.++.  .....+.+..|+++|+.+ +|+||+.++|+|..++
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            344556689999999999998642       146799999887  334577899999999999 5999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcC---C---C----C--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDS---E---N----G--VLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~---~---~----~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..++|.||+..|+|.++|+..+   .   .    .  ..++..+.+.++.|||.||+||++   .+++||||.++||||.
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~  452 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLIT  452 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEec
Confidence            9999999999999999998876   0   0    1  238999999999999999999999   9999999999999999


Q ss_pred             CCCCeeeeccccc-------------ccc--CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          486 ANFNARLESSFTL-------------TAG--TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       486 ~~~~~kl~d~~~~-------------~~g--t~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      .+..+||.|..-.             ..|  ...|||||.+....|+.|||||||||+||||++ |..||.+....   .
T Consensus       453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~---~  529 (609)
T KOG0200|consen  453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT---E  529 (609)
T ss_pred             CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH---H
Confidence            9999999882211             111  345999999999999999999999999999999 89999763211   1


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                                   ++.+.+.+.-+...+..+...++++|+.||+.+|++||++.++++.|+..
T Consensus       530 -------------~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  530 -------------ELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             -------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence                         12223344445566778889999999999999999999999999999874

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=6.1e-33  Score=282.90  Aligned_cols=231  Identities=23%  Similarity=0.285  Sum_probs=190.7

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||.|++|.||+++...++..+++|.+....    ...+.+.+|+.++++++|+||+++++.+.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999998889999999886522    3456799999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------cccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------TLTA  500 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------~~~~  500 (645)
                      .+++.+...    +++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+++.|..           ....
T Consensus        81 ~~~l~~~~~----l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~  153 (262)
T cd05572          81 WTILRDRGL----FDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC  153 (262)
T ss_pred             HHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence            999976432    8999999999999999999999   999999999999999999999997721           1235


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      |+..|++||.+....++.++|+||||+++|||++|..||.......  ....            ....+......++...
T Consensus       154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~------------~~~~~~~~~~~~~~~~  219 (262)
T cd05572         154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIY------------NDILKGNGKLEFPNYI  219 (262)
T ss_pred             CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHH------------HHHhccCCCCCCCccc
Confidence            7889999999988889999999999999999999999997643211  1111            1111111122334444


Q ss_pred             HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          581 MKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      ...+.+++..||+.+|++||+     ++|+++
T Consensus       220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            678899999999999999999     677665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.2e-32  Score=278.60  Aligned_cols=237  Identities=26%  Similarity=0.385  Sum_probs=198.9

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLVY  423 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~  423 (645)
                      +|+..+.||+|++|.||+|....++..+++|.+....   ...+.+.+|++++++++|+||+++++++...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999999889999999887644   4567899999999999999999999999988  8899999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ||+++++|.+++....    .+++.++..++.|+++||+|||+   .+++|+||+|+||+++.++..++.|.        
T Consensus        81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  153 (260)
T cd06606          81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD  153 (260)
T ss_pred             EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence            9999999999997654    38999999999999999999999   99999999999999999999999772        


Q ss_pred             ------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 ------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            .....++..|+|||.+.....+.++||||||++++||++|+.||.....      .....+.         ...
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~---------~~~  218 (260)
T cd06606         154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN------PMAALYK---------IGS  218 (260)
T ss_pred             ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHh---------ccc
Confidence                  2234578899999999988899999999999999999999999976431      1111111         111


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .......+......+.+++.+|+..+|.+||++.++++
T Consensus       219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            11122334445678899999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.6e-32  Score=276.44  Aligned_cols=235  Identities=26%  Similarity=0.395  Sum_probs=195.5

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      |+..+.||+|++|.||++....++..+++|+...... ..+.+.+|++++++++|+|++++++++...+..++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            6677899999999999999988899999999877443 567899999999999999999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------cc
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------FT  497 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------~~  497 (645)
                      ++|.+++....   ..+++..+..++.|++.||+|||+   .+++||||+|+||+++.++..++.|.           ..
T Consensus        82 ~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  155 (253)
T cd05122          82 GSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN  155 (253)
T ss_pred             CcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccccc
Confidence            99999987653   238999999999999999999998   99999999999999999999999772           13


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...++..|+|||.+....++.++||||||++++||++|+.||...+....    ....             .........
T Consensus       156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~-------------~~~~~~~~~  218 (253)
T cd05122         156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA----LFKI-------------ATNGPPGLR  218 (253)
T ss_pred             ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH----HHHH-------------HhcCCCCcC
Confidence            34578889999999988899999999999999999999999875432110    0000             001111111


Q ss_pred             HH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          578 ED--EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       578 ~~--~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..  ....+.+++..||+.+|++|||+.++++
T Consensus       219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11  2567888999999999999999999975

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=302.93  Aligned_cols=252  Identities=23%  Similarity=0.319  Sum_probs=200.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-C-----CCeeeeeeeeeeCCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-H-----KNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H-----~niv~l~g~~~~~~~~~lV  422 (645)
                      +|.+.+.||+|.||.|-+|.+..+++.||||+++....-..+-..|+.+|..|+ |     -|+|++++++..++++|||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV  266 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV  266 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence            788899999999999999999999999999999987777778889999999997 5     4999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC--CCeeeecccc---
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN--FNARLESSFT---  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~--~~~kl~d~~~---  497 (645)
                      +|.+ ..+|+++|+.+...+  ++......|+.||+.||.+||+   .+|||+||||+||||.+-  ..+|+.|...   
T Consensus       267 fELL-~~NLYellK~n~f~G--lsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  267 FELL-STNLYELLKNNKFRG--LSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             ehhh-hhhHHHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccc
Confidence            9999 679999999877554  8999999999999999999998   999999999999999654  3567777332   


Q ss_pred             ------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh------------
Q 041096          498 ------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY------------  559 (645)
Q Consensus       498 ------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~------------  559 (645)
                            ..+.+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.++.+....+++ +.+..            
T Consensus       341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e-~lG~Pp~~mL~~~~~~~  419 (586)
T KOG0667|consen  341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIE-VLGLPPPKMLDTAKKAH  419 (586)
T ss_pred             cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHH-HhCCCCHHHHHhccccc
Confidence                  23467789999999999999999999999999999999888877654333322222 11111            


Q ss_pred             ---cc-Cc------hhH--------H--------hhhhccC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 041096          560 ---AE-GR------IIE--------A--------ADKRLNG--------AFNEDEMKRLLLVGLSCANPDSSARPSMRRV  605 (645)
Q Consensus       560 ---~~-~~------~~~--------~--------~d~~l~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~v  605 (645)
                         .. ..      ..+        .        .+.....        ......-..+.++++.|+..||.+|+|..+.
T Consensus       420 kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qa  499 (586)
T KOG0667|consen  420 KFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQA  499 (586)
T ss_pred             eehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHH
Confidence               00 00      000        0        0110000        0111334567899999999999999999999


Q ss_pred             HH
Q 041096          606 FQ  607 (645)
Q Consensus       606 l~  607 (645)
                      ++
T Consensus       500 l~  501 (586)
T KOG0667|consen  500 LN  501 (586)
T ss_pred             hc
Confidence            87

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-34  Score=300.02  Aligned_cols=235  Identities=27%  Similarity=0.355  Sum_probs=195.8

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc----hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      |...+.||.|+||.||-+.+..+.++||||++.-+..    .-+++++|+..|++++|||++.+-||+......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            5556779999999999999999999999999876432    235689999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------c
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------T  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------~  497 (645)
                      | -||-.++|.-..+   ++....+..|..|.+.||+|||+   .+.||||||+.||||.+.+.+|++|..        .
T Consensus       108 C-lGSAsDlleVhkK---plqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn  180 (948)
T KOG0577|consen  108 C-LGSASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN  180 (948)
T ss_pred             H-hccHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence            9 5677777765544   48889999999999999999999   999999999999999999999998844        3


Q ss_pred             ccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          498 LTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       498 ~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      ..+||+.|||||++.   .+.|+-|+||||+||...||+..++|+...+.-.....+             .+.--|.|  
T Consensus       181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-------------AQNesPtL--  245 (948)
T KOG0577|consen  181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-------------AQNESPTL--  245 (948)
T ss_pred             cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH-------------HhcCCCCC--
Confidence            358999999999885   578999999999999999999999998775421111111             01111222  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       ...+....+..++..|++.-|.+|||.++++.
T Consensus       246 -qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  246 -QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             -CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence             24567888999999999999999999988876

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-35  Score=283.77  Aligned_cols=237  Identities=27%  Similarity=0.351  Sum_probs=201.5

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      |++..+||+|+||.||++.++.+|.++|||...- +.+.+++.+|+.+|++.+.|++|+++|.+.....+|+|||||--|
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG  113 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG  113 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence            5667889999999999999999999999998764 446788999999999999999999999999999999999999999


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------------ccc
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------SFT  497 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------------~~~  497 (645)
                      +..+.++.+++   +|....+..++...++||+|||.   ..-+|||||+.||||+.++.+|+.|            ...
T Consensus       114 SiSDI~R~R~K---~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN  187 (502)
T KOG0574|consen  114 SISDIMRARRK---PLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN  187 (502)
T ss_pred             cHHHHHHHhcC---CccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC
Confidence            99999987654   49999999999999999999998   8889999999999999999999977            234


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||+-|||||++..-.|+.++||||+|+...||..|++||.....-.....+.       .      ..-+..  .-+
T Consensus       188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP-------T------~PPPTF--~KP  252 (502)
T KOG0574|consen  188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-------T------KPPPTF--KKP  252 (502)
T ss_pred             ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc-------C------CCCCCC--CCh
Confidence            4679999999999999999999999999999999999999997643211110000       0      000111  234


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      +.....+.+++..|+-..|++|-|+.++++.
T Consensus       253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  253 EEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            5667788999999999999999999998873

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-32  Score=287.46  Aligned_cols=255  Identities=18%  Similarity=0.245  Sum_probs=189.9

Q ss_pred             CCCcCceeccCCceEEEEEEECC--CCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFAS--SGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELL  420 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~  420 (645)
                      +|+..+.||+|+||.||+|....  .+..+|+|.+....    ...+.+.+|+.++.+++||||+++++++.+.  +..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47778899999999999999987  78999999887632    2345678899999999999999999999988  7899


Q ss_pred             EEEecCCCCCHhHHhhhcCCCC-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC----CCCeeeecc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA----NFNARLESS  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~----~~~~kl~d~  495 (645)
                      +||||+++ +|.+++....... ..++......++.|++.||+|||+   .+++||||||+||+++.    ++..|+.|.
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999964 7777765433222 258899999999999999999999   99999999999999999    888999772


Q ss_pred             c---------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccch-----hhHHHH
Q 041096          496 F---------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKM-----VNLVDW  554 (645)
Q Consensus       496 ~---------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~-----~~l~~~  554 (645)
                      .               ....++..|+|||.+.+. .++.++|||||||+++||++|+.||.........     ...+..
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            2               112467889999988764 5799999999999999999999999765432200     000000


Q ss_pred             HHhhhcc------------CchhHHhhhhccCCCC----H-------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          555 VWGLYAE------------GRIIEAADKRLNGAFN----E-------DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       555 ~~~~~~~------------~~~~~~~d~~l~~~~~----~-------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +......            .......+......++    .       .....+.+++..|++.+|++|||+.++++
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            1010000            0000100011111111    0       22346888999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-33  Score=295.25  Aligned_cols=256  Identities=21%  Similarity=0.290  Sum_probs=193.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----CeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~  419 (645)
                      +++|...++||+|+||.||+|....++..||+|.+..  .......+.+|+.++++++|+||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            4689999999999999999999988899999998864  223455688999999999999999999987654     358


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++|+||+. ++|..++...     .+++..+..++.|++.||+|||+   .+++||||||+|||++.++..++.|..   
T Consensus        84 ~lv~e~~~-~~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          84 YIVQELME-TDLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             EEEehhcc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECccccee
Confidence            99999996 5888877543     38999999999999999999999   999999999999999999999997721   


Q ss_pred             ------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC-
Q 041096          497 ------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG-  562 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~-  562 (645)
                                  ....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...+...    ............ 
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~----~~~~~~~~~~~~~  230 (336)
T cd07849         155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH----QLNLILGVLGTPS  230 (336)
T ss_pred             eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHcCCCC
Confidence                        11357888999998754 568999999999999999999999996543211    111111111110 


Q ss_pred             --chhHHhhhh-------cc--CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCC
Q 041096          563 --RIIEAADKR-------LN--GAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEP  615 (645)
Q Consensus       563 --~~~~~~d~~-------l~--~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~  615 (645)
                        ......+..       +.  ...     .......+.+++..||+.+|++|||+.++++.  ++.....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence              011000000       00  000     01124568899999999999999999999985  6655433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.2e-32  Score=284.00  Aligned_cols=232  Identities=25%  Similarity=0.307  Sum_probs=182.7

Q ss_pred             eeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHh---hcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIA---CLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~---~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +||+|+||.||++....++..+|+|.+....    .....+.+|..++.   ..+|+|++.+++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999998889999999876522    22233455554443   3479999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----------  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----------  497 (645)
                      +++|.+++....    .+++.+...++.|++.||+|||+   .+++||||||+|||++.++..++.|...          
T Consensus        81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~  153 (279)
T cd05633          81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  153 (279)
T ss_pred             CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence            999999987543    38999999999999999999999   9999999999999999999999977321          


Q ss_pred             ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          498 LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...|+..|+|||.+.. ..++.++|||||||+++||++|+.||........ ..+..              .........
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~--------------~~~~~~~~~  218 (279)
T cd05633         154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDR--------------MTLTVNVEL  218 (279)
T ss_pred             CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHH--------------HhhcCCcCC
Confidence            2358999999999864 5689999999999999999999999975432111 11100              001111223


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQI  608 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~~  608 (645)
                      +......+.+++..|++.+|++||     +++++++.
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            344556788888999999999999     59999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.1e-32  Score=286.24  Aligned_cols=254  Identities=19%  Similarity=0.246  Sum_probs=189.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|++|.||+|....++..+|+|.+....   .....+.+|++++++++|+||+++++++...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888899999999999999998889999999886532   234578899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF-------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~-------  496 (645)
                      |++ ++|.+++.....  ..+++.....++.||+.||+|||+   ++++||||||+||+++. +...|+.|..       
T Consensus        82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~  155 (294)
T PLN00009         82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI  155 (294)
T ss_pred             ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence            995 688888754332  236788888999999999999998   99999999999999985 4557886621       


Q ss_pred             -----cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----hcc-Cchh
Q 041096          497 -----TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----YAE-GRII  565 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~~~-~~~~  565 (645)
                           ....++..|+|||++.+. .++.++|||||||++|||++|+.||......+............    +.. ..+.
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (294)
T PLN00009        156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP  235 (294)
T ss_pred             CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence                 123467889999988764 57899999999999999999999997643322111111110000    000 0000


Q ss_pred             HHh--hhhccCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAA--DKRLNGA----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~--d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +..  .+.....    ........+.+++.+|++.+|++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000  0000000    01122355788999999999999999999986

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-33  Score=277.88  Aligned_cols=268  Identities=24%  Similarity=0.320  Sum_probs=203.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee-----CCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE-----KGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-----~~~  418 (645)
                      ...|...+.||+|+||.|+.+....+|+.||||++..   .....+.-.+|+++|+.++|+||+.+.+.+..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            3445556789999999999999999999999999874   34456778899999999999999999998765     247


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---  495 (645)
                      .|+|+|+| ..+|...++.+..    |+..+...++.|+++||.|+|+   .+++||||||+|+|++.+...||.|.   
T Consensus       101 vYiV~elM-etDL~~iik~~~~----L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLA  172 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIKSQQD----LTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLA  172 (359)
T ss_pred             eEEehhHH-hhHHHHHHHcCcc----ccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccce
Confidence            89999999 7799999976543    8899999999999999999999   99999999999999999999998772   


Q ss_pred             -----------ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          496 -----------FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       496 -----------~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                 .+..+.|.+|+|||++.. ..||.+.||||.||++.||++|+..|.+.+.-+.. .++..+.+...+..
T Consensus       173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql-~lI~~~lGtP~~e~  251 (359)
T KOG0660|consen  173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQL-QLILELLGTPSEED  251 (359)
T ss_pred             eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHH-HHHHHhcCCCCHHH
Confidence                       244567899999998864 67999999999999999999999999876532222 22222222221111


Q ss_pred             --------hhHHhhhhc---cCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCCCCCCC
Q 041096          564 --------IIEAADKRL---NGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVPKLKP  623 (645)
Q Consensus       564 --------~~~~~d~~l---~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~p~~~~  623 (645)
                              ....+...-   +..+   -++.-...+++...++..||.+|+|++|.++  +|....++..-|...+
T Consensus       252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~  327 (359)
T KOG0660|consen  252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQP  327 (359)
T ss_pred             HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCC
Confidence                    111111000   0000   0123345678888999999999999999987  5666555554443333

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.1e-32  Score=292.05  Aligned_cols=252  Identities=21%  Similarity=0.234  Sum_probs=191.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------  416 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------  416 (645)
                      ..++|+..+.||+|+||.||+|....++..+|+|++...   ......+.+|+.++++++|+||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457899999999999999999999988999999988652   23345678899999999999999999987643      


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      ...++||||+. ++|.+.+...      ++..++..++.|++.||+|||+   .+++||||||+||+++.++..++.|..
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg  163 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG  163 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCc
Confidence            35799999995 5888887532      7888999999999999999999   999999999999999999999997721


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH---------
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW---------  556 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~---------  556 (645)
                                 ....++..|+|||.+.+..++.++|||||||++|||++|+.||...+.......+.....         
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (353)
T cd07850         164 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR  243 (353)
T ss_pred             cceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence                       123478889999999999999999999999999999999999975432111111110000         


Q ss_pred             -----h-hhcc------CchhHHhhhhcc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          557 -----G-LYAE------GRIIEAADKRLN----GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       557 -----~-~~~~------~~~~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           . ....      ....+.....+.    ..........+.+++..|++.||++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                 0 0000      000001000000    0001123556789999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-32  Score=278.47  Aligned_cols=236  Identities=25%  Similarity=0.357  Sum_probs=191.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC------cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS------HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~  419 (645)
                      .+|+..++||+|+||.||+|....++..+++|.+...      ......+.+|++++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999999888999999986431      22345788999999999999999999998764  468


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++++||+++++|.+++....    .+++.....++.|++.||.|||+   .+++|+||||+||+++.++..++.|..   
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  154 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASK  154 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence            99999999999999987543    27899999999999999999998   999999999999999999999987721   


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ....|+..|+|||.+.+..++.++|||||||+++||++|+.||......   ..             +
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~-------------~  218 (264)
T cd06653         155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AA-------------I  218 (264)
T ss_pred             ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HH-------------H
Confidence                        1234788999999999888999999999999999999999999753211   11             1


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+..........+....+.+.+++..||+ +|.+||+..+++.
T Consensus       219 ~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         219 FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            11111112233455556778888999999 5799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.3e-32  Score=281.29  Aligned_cols=233  Identities=25%  Similarity=0.329  Sum_probs=187.6

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||+||++....++..+|+|.+...    ....+.+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999999888999999987642    22345678899999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------cccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------TLTA  500 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------~~~~  500 (645)
                      .+++.....  ..+++.++..++.|++.||.|||+   .+++||||+|+||+++.++..+++|..           ....
T Consensus        81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (277)
T cd05577          81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA  155 (277)
T ss_pred             HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence            999976542  248999999999999999999999   999999999999999999999997732           1235


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      ++..|+|||.+.++.++.++||||||++++||++|+.||...........+..             ... ......+...
T Consensus       156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------~~~-~~~~~~~~~~  221 (277)
T cd05577         156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-------------RTL-EMAVEYPDKF  221 (277)
T ss_pred             CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-------------ccc-cccccCCccC
Confidence            67889999999888899999999999999999999999976432111111100             000 0011223334


Q ss_pred             HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          581 MKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ...+.+++..||+.+|.+||     ++.++++
T Consensus       222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            56778899999999999999     5555654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-32  Score=281.79  Aligned_cols=252  Identities=22%  Similarity=0.288  Sum_probs=190.9

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc--hhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |...+.||+|++|.||+|....++..++||++.....  ......+|+..+.+++ |+|++++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            4567889999999999999988899999998876432  3334567999999999 999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                       +|+|.+++....  +..+++.++..++.|++++|.|||+   .+++|+||+|+||+++.++..++.|..          
T Consensus        81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP  154 (283)
T ss_pred             -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence             889999987654  2348999999999999999999999   999999999999999999999998721          


Q ss_pred             -cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH---------HhhhccCchh
Q 041096          497 -TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV---------WGLYAEGRII  565 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~---------~~~~~~~~~~  565 (645)
                       ....++..|+|||.+.. ..++.++||||||+++|||++|+.||................         ..........
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence             22357888999998754 557999999999999999999999997643322211111110         0000000000


Q ss_pred             HHhhhhcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+.....   ..........+.+++..||+.+|++|||++|++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            00000000   0001112466889999999999999999999975

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-32  Score=275.51  Aligned_cols=235  Identities=27%  Similarity=0.429  Sum_probs=195.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|+..+.||+|++|.||++.....+..+++|.+....   .....+.+|++++++++|+|++++++++.+++..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4677889999999999999998888999999987743   3566899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++....    .+++..+..++.|++.||.|||+   .+++||||||+||+++.++..++.|..         
T Consensus        81 ~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627          81 AENGSLRQIIKKFG----PFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             CCCCcHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence            99999999997653    38999999999999999999998   999999999999999999999998721         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....++..|+|||......++.++||||+|+++|||++|+.||......   ....    ...          ....
T Consensus       154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~---~~~~----~~~----------~~~~  216 (254)
T cd06627         154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM---AALF----RIV----------QDDH  216 (254)
T ss_pred             ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH---HHHH----HHh----------ccCC
Confidence               1235788899999998888899999999999999999999998754311   0110    000          0111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+......+..++.+|++.+|++||++.+++.
T Consensus       217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         217 PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            1233344567888999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.6e-32  Score=285.80  Aligned_cols=254  Identities=24%  Similarity=0.264  Sum_probs=190.9

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----  417 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----  417 (645)
                      .+.++|+..+.||+|+||.||+|....++..||+|.++..   ......+.+|++++++++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3557889999999999999999999988999999988653   223456788999999999999999999987654    


Q ss_pred             ------eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          418 ------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       418 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                            ..++|+||+++ +|...+....   ..+++.++..++.|++.||+|||+   .+++||||||+||++++++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~k  156 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIK  156 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEE
Confidence                  78999999975 7777776542   238999999999999999999999   9999999999999999999999


Q ss_pred             eecccc-------------ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh
Q 041096          492 LESSFT-------------LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       492 l~d~~~-------------~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      +.|...             ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+......
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~  236 (302)
T cd07864         157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS  236 (302)
T ss_pred             eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence            977221             1234678999998865 45789999999999999999999999754322211111111100


Q ss_pred             hhccCchhHH--------hhh------hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          558 LYAEGRIIEA--------ADK------RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       558 ~~~~~~~~~~--------~d~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      . ......+.        .++      ..... ....+..+.+++..||+.+|.+||+++++++
T Consensus       237 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         237 P-CPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             C-Chhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0 00000000        000      00000 0112467889999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-32  Score=291.18  Aligned_cols=240  Identities=26%  Similarity=0.329  Sum_probs=200.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~l  421 (645)
                      ...|...+.||+|.||.||+++.+.+|..+|+|.+.+..    .......+|+.+|+++. |||||.+.+.+++....++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            356777889999999999999999999999999987632    24568999999999998 9999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC----CCeeeec---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN----FNARLES---  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~----~~~kl~d---  494 (645)
                      |||++.+|.|.+.+...     .++..+...++.|++.+++|||+   .+++||||||+|+|+...    +..++.|   
T Consensus       114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            99999999999999876     18999999999999999999999   999999999999999654    3567766   


Q ss_pred             --------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          495 --------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       495 --------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                              .....+||+.|+|||++....|+.++||||.||++|.|++|..||...........+..        ++   
T Consensus       186 a~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~--------~~---  254 (382)
T KOG0032|consen  186 AKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR--------GD---  254 (382)
T ss_pred             ceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc--------CC---
Confidence                    23446899999999999999999999999999999999999999987654322221111        00   


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                         .......-......+.+++..|+..||.+|+|+.++++.
T Consensus       255 ---~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  255 ---FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             ---CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence               011122223346677788899999999999999999984

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.4e-32  Score=285.22  Aligned_cols=250  Identities=22%  Similarity=0.306  Sum_probs=187.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------  417 (645)
                      .++|+..+.||+|+||.||+|....++..+|||.+....   .....+.+|++++++++||||++++++|...+      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            357888999999999999999999889999999876422   22345678999999999999999999987643      


Q ss_pred             --eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          418 --ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       418 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                        ..++||||+. ++|.+++.....   .+++.+.+.++.|++.||+|||+   .+++|+||||+||+++.++.+++.|.
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~df  163 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNKNV---KFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADF  163 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcC
Confidence              4599999995 588888865432   38999999999999999999999   89999999999999999999999772


Q ss_pred             c----------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 F----------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ~----------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .                ....++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .....+......
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~~~~~~  242 (310)
T cd07865         164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLISQLCGS  242 (310)
T ss_pred             CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence            1                112457789999988664 4788999999999999999999998764321 111122221111


Q ss_pred             hcc-----CchhH-------------HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAE-----GRIIE-------------AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~-----~~~~~-------------~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...     ....+             .....+...   .....+.+++..||+.+|++|||++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CChhhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            000     00000             011111100   01245678999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.1e-32  Score=285.10  Aligned_cols=253  Identities=23%  Similarity=0.302  Sum_probs=189.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~l  421 (645)
                      .++|+..+.||+|+||.||+|....++..||+|.+....   .....+.+|+.++++++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            357888999999999999999999889999999886432   1233567899999999999999999998754  56899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+. ++|.+++....   ..+++.++..++.|+++||+|||+   .+++||||||+||+++.++..++.|..     
T Consensus        86 v~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~  158 (309)
T cd07845          86 VMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTY  158 (309)
T ss_pred             EEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeec
Confidence            999996 58988887543   248999999999999999999999   999999999999999999999997721     


Q ss_pred             -------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhcc
Q 041096          497 -------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYAE  561 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~~  561 (645)
                             ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+.+..       |.....
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07845         159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD  238 (309)
T ss_pred             CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence                   11234677999999875 457999999999999999999999997644322211111110       000000


Q ss_pred             CchhHHhh---hhccCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 GRIIEAAD---KRLNGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ~~~~~~~d---~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ........   ... ...   .......+.+++..|++.||++|||++++++
T Consensus       239 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         239 LPLVGKFTLPKQPY-NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             ccccccccccCCCC-CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00000000   000 000   0012445678999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.2e-32  Score=280.06  Aligned_cols=230  Identities=27%  Similarity=0.380  Sum_probs=189.9

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||.||+++...++..+++|.+....    ...+.+.+|++++++++|+||+++++.+..++..|++|||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999999889999999886532    3456789999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------------
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------------  496 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------------  496 (645)
                      .+++.+..    .+++..+..++.|+++||+|||+   .+++|+||+|+||+++.++..++.|..               
T Consensus        81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  153 (265)
T cd05579          81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND  153 (265)
T ss_pred             HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence            99997644    38999999999999999999998   999999999999999999999997721               


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....++..|+|||.......+.++||||||+++|||++|+.||.......    ....            .....
T Consensus       154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~------------~~~~~  217 (265)
T cd05579         154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE----IFQN------------ILNGK  217 (265)
T ss_pred             ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHH------------HhcCC
Confidence                 12246778999999988889999999999999999999999997543211    1110            00001


Q ss_pred             ccCCCCHHH--HHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          572 LNGAFNEDE--MKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       572 l~~~~~~~~--~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      .  ..+...  ...+.+++..||+.+|.+|||+..+.+.|+
T Consensus       218 ~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         218 I--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             c--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            1  112222  567889999999999999999977776665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.4e-32  Score=284.31  Aligned_cols=244  Identities=27%  Similarity=0.372  Sum_probs=187.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEec
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +|...+.||+|+||.||++....++..+|+|.+...  ......+.+|+.++.++. |+||+++++++...+..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            344567899999999999999988999999988653  234567899999999996 99999999999999999999999


Q ss_pred             CCCCCHhHHhhhc-CCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          426 MPNGSLDRMLYQD-SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      +. ++|.++.... ......+++.....++.|++.||+|||+  ..+++||||||+||+++.++..++.|..        
T Consensus        85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            85 4555433211 1112348999999999999999999997  2589999999999999999999997731        


Q ss_pred             ---cccccCCcccCcccccCC---CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ---TLTAGTMGYLAPEYLQYG---TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~---~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                         ....|+..|+|||.+...   .++.++|||||||++|||++|+.||.....      ..........      ...+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~------~~~~  229 (288)
T cd06616         162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS------VFDQLTQVVK------GDPP  229 (288)
T ss_pred             CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch------HHHHHhhhcC------CCCC
Confidence               123578899999998876   689999999999999999999999965321      1111100000      0011


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+...........+.+++..||+.+|++|||+++|++
T Consensus       230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1212222234567889999999999999999999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-34  Score=273.66  Aligned_cols=240  Identities=21%  Similarity=0.280  Sum_probs=191.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +++|+..+.||+|.|+.||++....+|+.+|+|++..   +..+.++..+|+++.+.|+|||||+|.....+....|||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            4567778899999999999999999999999997754   4446778999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC---CCeeeec------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN---FNARLES------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~---~~~kl~d------  494 (645)
                      |+|.+++|..-+-.+    ...+....-..+.||+++|.|+|.   ++|+|||+||.|++|.+.   -..|+++      
T Consensus        90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            999999997766554    237788888999999999999999   999999999999999543   2345544      


Q ss_pred             -----cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          495 -----SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       495 -----~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           .....+||++|||||++...+|+..+|||+.||+||-|+.|+.||.+.+.......+...              +
T Consensus       163 l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g--------------~  228 (355)
T KOG0033|consen  163 VNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG--------------A  228 (355)
T ss_pred             eCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc--------------c
Confidence                 123357999999999999999999999999999999999999999875432222111110              0


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      -...+..-....+...+|+..|+..||++|.|+.|.+.
T Consensus       229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            00111111123455667788999999999999887753

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.3e-32  Score=289.90  Aligned_cols=264  Identities=21%  Similarity=0.264  Sum_probs=197.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----Ce
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~  418 (645)
                      .++|...+.||+|+||.||+|....++..||||.+...   ......+.+|+.+++.++|+||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            45788899999999999999999888999999987652   33345678899999999999999999988654     35


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .++|+||+. ++|.+++....    .+++.....++.|++.||.|||+   .+++||||||+||+++.++..|+.|..  
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~  155 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLA  155 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence            899999995 78998886543    38999999999999999999999   999999999999999999999997722  


Q ss_pred             ----------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhh
Q 041096          497 ----------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGL  558 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~  558 (645)
                                ....++..|+|||.+.. ..++.++|||||||++|||++|+.||...+.......+.+..       +..
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07858         156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF  235 (337)
T ss_pred             cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence                      12357788999998865 468999999999999999999999997543211111111100       000


Q ss_pred             hccCchhHHhhhhccC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCCCCC
Q 041096          559 YAEGRIIEAADKRLNG------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEPLVV  618 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~~~~  618 (645)
                      .......+.++.....      ....+....+.+++.+||+.+|++|||++++++.  ++........
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~  303 (337)
T cd07858         236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE  303 (337)
T ss_pred             cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence            0111111111100000      0111235667899999999999999999999985  6655444433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-32  Score=278.43  Aligned_cols=236  Identities=25%  Similarity=0.257  Sum_probs=185.2

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHH-hhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSII-ACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +.||+|+||.||+|....++..+|+|.+....    .....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999998889999999886532    1223344555444 445899999999999999999999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------cccc
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------TLTA  500 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------~~~~  500 (645)
                      ++|.+++....    .+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.+++.|..        ....
T Consensus        82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  154 (260)
T cd05611          82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV  154 (260)
T ss_pred             CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCC
Confidence            99999997543    38899999999999999999999   999999999999999999999997732        2335


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      |+..|+|||.+.+..++.++||||||+++|||++|..||.......    ...    ....+.      ...........
T Consensus       155 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~----~~~~~~------~~~~~~~~~~~  220 (260)
T cd05611         155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA----VFD----NILSRR------INWPEEVKEFC  220 (260)
T ss_pred             CCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH----HHH----HHHhcc------cCCCCcccccC
Confidence            7889999999988889999999999999999999999997543211    110    000000      00011112234


Q ss_pred             HHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          581 MKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ...+.+++..||+.+|++||++.++.+.|.
T Consensus       221 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         221 SPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             CHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            567889999999999999998877766554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.2e-32  Score=287.18  Aligned_cols=263  Identities=18%  Similarity=0.242  Sum_probs=193.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~  417 (645)
                      .++|...+.||+|+||.||+|....++..+|+|++...   ......+.+|+.++++++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            37899999999999999999999888999999988652   22345688999999999999999999998654      3


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++|+||+. .+|..++.      ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|.. 
T Consensus        94 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~  163 (342)
T cd07879          94 DFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGL  163 (342)
T ss_pred             eEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence            5699999995 47776652      128899999999999999999999   899999999999999999999998732 


Q ss_pred             --------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~  560 (645)
                              ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+....       .....
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T cd07879         164 ARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLE  243 (342)
T ss_pred             CcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhc
Confidence                    12356788999999876 468999999999999999999999997643211111111000       00000


Q ss_pred             cCchhHHhhh--hc-cCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCCC
Q 041096          561 EGRIIEAADK--RL-NGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVP  619 (645)
Q Consensus       561 ~~~~~~~~d~--~l-~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~p  619 (645)
                      ........+.  .. ....   .......+.+++..||+.||++||+++++++  .+++..+....+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~  310 (342)
T cd07879         244 DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET  310 (342)
T ss_pred             ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence            0000000000  00 0000   0112345778999999999999999999995  477665544333

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.2e-32  Score=283.57  Aligned_cols=236  Identities=26%  Similarity=0.334  Sum_probs=187.9

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      |...+.||+|+||.||+|+...++..+++|.+...    ....+.+.+|+++++.++|+|++++++++.+.+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            45567899999999999999888999999987642    22335688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------c
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------T  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------~  497 (645)
                      +. |+|.+++.....   .+++.++..++.|++.||+|||+   .+++||||||+||+++.++..++.|..        .
T Consensus       103 ~~-~~l~~~l~~~~~---~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~  175 (313)
T cd06633         103 CL-GSASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN  175 (313)
T ss_pred             CC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC
Confidence            95 678887765432   38999999999999999999998   999999999999999999999998731        2


Q ss_pred             ccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          498 LTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       498 ~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      ...|+..|+|||++.   .+.++.++|||||||++|||++|..||.........    ..   ...         .....
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~----~~---~~~---------~~~~~  239 (313)
T cd06633         176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YH---IAQ---------NDSPT  239 (313)
T ss_pred             CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH----HH---HHh---------cCCCC
Confidence            345788999999984   456889999999999999999999998764321111    00   000         00001


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .........+.+++..||+.+|.+||++.+++..
T Consensus       240 ~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         240 LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1112233457888999999999999999999853

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.1e-32  Score=288.47  Aligned_cols=261  Identities=22%  Similarity=0.287  Sum_probs=195.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~  419 (645)
                      .++|+..+.||+|+||.||+|....++..||+|++...   ......+.+|+.++++++|+||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36788899999999999999999988999999988753   2334567889999999999999999998763    3468


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++|+||+. ++|.+++....    .+++.....++.|+++||+|||+   .+++||||||+||+++.++..|+.|..   
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             EEEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccce
Confidence            99999995 68999886543    28999999999999999999999   999999999999999999999997721   


Q ss_pred             -------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH-------H
Q 041096          497 -------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW-------V  555 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~-------~  555 (645)
                                   ....|+..|+|||.+.. ..++.++|||||||++|||++|+.||...+.......+...       .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~  235 (334)
T cd07855         156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV  235 (334)
T ss_pred             eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence                         12357889999998865 56899999999999999999999999764321111110000       0


Q ss_pred             HhhhccCchhHHhhhh-ccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCC
Q 041096          556 WGLYAEGRIIEAADKR-LNGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEP  615 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~-l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~  615 (645)
                      +.....+.+.+..+.. .....     .......+.+++..||+.+|.+||++.++++  .+++...+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence            0000011111111100 00011     1223567899999999999999999999987  34444333

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=3.1e-32  Score=282.98  Aligned_cols=231  Identities=23%  Similarity=0.311  Sum_probs=188.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHh
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD  432 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  432 (645)
                      .+||+|+||.||++....++..+|+|.+... ......+.+|+.++++++|+|++++++++...+..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            5699999999999999888999999987653 334567899999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------cccc
Q 041096          433 RMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------TLTA  500 (645)
Q Consensus       433 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~~~~  500 (645)
                      +++...     .+++.....++.|++.||+|||+   .+++||||||+||+++.++..++.|..            ....
T Consensus       106 ~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~  177 (292)
T cd06657         106 DIVTHT-----RMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV  177 (292)
T ss_pred             HHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence            987543     27899999999999999999999   899999999999999999999997721            1235


Q ss_pred             cCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       501 gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      |+..|+|||.+....++.++||||||+++|||++|..||......    .......         +...+.+.  .....
T Consensus       178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~----~~~~~~~---------~~~~~~~~--~~~~~  242 (292)
T cd06657         178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIR---------DNLPPKLK--NLHKV  242 (292)
T ss_pred             cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH---------hhCCcccC--CcccC
Confidence            788999999998888999999999999999999999998753221    1111000         00111110  11123


Q ss_pred             HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          581 MKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+.+++.+||+.+|.+||++.++++
T Consensus       243 ~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         243 SPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             CHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            445778889999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-32  Score=279.78  Aligned_cols=250  Identities=21%  Similarity=0.290  Sum_probs=192.2

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |+..+.||+|++|.||+|....++..+++|.+....   .....+.+|++++++++|+||+++++++..++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456678999999999999998889999999886632   23567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++ +|.+++.....   .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++..++.|..          
T Consensus        81 ~~-~l~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~  153 (283)
T cd05118          81 DT-DLYKLIKDRQR---GLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR  153 (283)
T ss_pred             CC-CHHHHHHhhcc---cCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence            64 89888876432   38999999999999999999999   999999999999999999999997721          


Q ss_pred             --cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc---CchhH---H
Q 041096          497 --TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE---GRIIE---A  567 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~---~~~~~---~  567 (645)
                        ....++..|+|||.+.+. .++.++||||||+++|||++|+.||...+..+......... .....   ....+   .
T Consensus       154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  232 (283)
T cd05118         154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTL-GTPDPEVWPKFTSLARN  232 (283)
T ss_pred             cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCchHhcccchhhhhh
Confidence              123467789999998876 78999999999999999999999997644321111111100 00000   00000   0


Q ss_pred             hhhhcc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLN-------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......       .....+....+.+++..||+++|.+||++++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            000000       0111234567889999999999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=7.6e-32  Score=276.29  Aligned_cols=242  Identities=21%  Similarity=0.262  Sum_probs=188.3

Q ss_pred             HHHHHHhcCCCcCcee--ccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          341 RELRSATRGFHSNRIL--GRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~l--G~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      .+.....++|+..+.+  |+|+||.||++....++..+|+|.........    .|+.....+ +|+||+++++++...+
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390          7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence            4445555677777766  99999999999999889999999876532211    122222222 6999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~  496 (645)
                      ..++||||+++++|.+++....    .+++.++..++.|+++||.|||+   .+++||||||+||+++.++ ..+++|..
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg  155 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYG  155 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence            9999999999999999997653    38999999999999999999999   8999999999999999988 88887732


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....|+..|+|||++.+..++.++||||||+++|||++|+.||.......  .....+...          .
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~----------~  223 (267)
T PHA03390        156 LCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE--LDLESLLKR----------Q  223 (267)
T ss_pred             cceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch--hhHHHHHHh----------h
Confidence                    22357889999999999899999999999999999999999997543221  111111111          1


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-MRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~~vl~  607 (645)
                      ....  .........+.+++..||+.+|.+||+ ++++++
T Consensus       224 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        224 QKKL--PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             cccC--CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            1111  122244567888889999999999996 688874

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.3e-32  Score=284.43  Aligned_cols=240  Identities=23%  Similarity=0.295  Sum_probs=179.4

Q ss_pred             CceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhh
Q 041096          360 AFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLY  436 (645)
Q Consensus       360 ~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~  436 (645)
                      ++|.||.++...++..+|+|++...   ....+.+.+|+++++.++|+||+++++++.+.+..+++|||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            3444555555557899999998653   3445679999999999999999999999999999999999999999999997


Q ss_pred             hcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------------------c
Q 041096          437 QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------------------T  497 (645)
Q Consensus       437 ~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------------------~  497 (645)
                      ....  ..+++.....++.|+++||+|||+   .+|+||||||+||+++.++.+++.+..                   .
T Consensus        92 ~~~~--~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~  166 (314)
T cd08216          92 THFP--EGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK  166 (314)
T ss_pred             Hhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence            6432  238889999999999999999999   999999999999999999999987621                   1


Q ss_pred             ccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh----ccCc-------h
Q 041096          498 LTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY----AEGR-------I  564 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~----~~~~-------~  564 (645)
                      ...++..|+|||.+..  ..++.++|||||||++|||++|+.||.......   .+.+......    ....       .
T Consensus       167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (314)
T cd08216         167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKVRGTVPCLLDKSTYPLYEDSM  243 (314)
T ss_pred             cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccCccccccCchhhhcCCc
Confidence            1235678999999876  358899999999999999999999997643211   1111111000    0000       0


Q ss_pred             hH----Hhhh----hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IE----AADK----RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~----~~d~----~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+    ..++    .............+.+++..||+.+|++|||++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            00    0000    0001112233456888999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.7e-32  Score=277.84  Aligned_cols=238  Identities=25%  Similarity=0.344  Sum_probs=188.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC------CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH------SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~------~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      +|...+.||+|+||.||++.....+..+++|..+.      .......+..|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            46778899999999999999876666565665443      122334577899999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|..++.........+++.+++.++.|+++||.|||+   .+++|+||||+||+++.+ ..++.|..      
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~~-~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKNN-LLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeecC-CEeecccCceeecC
Confidence            99999999999987644444569999999999999999999998   999999999999999864 47776621      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....|+..|+|||......++.++||||||+++|||++|+.||.....    ......            .. .
T Consensus       157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~----~~~~~~------------~~-~  219 (260)
T cd08222         157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF----LSVVLR------------IV-E  219 (260)
T ss_pred             CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHHH------------HH-c
Confidence                  123478899999999888899999999999999999999999864221    111110            00 1


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......+......+.+++.+||+.+|++||++.++++
T Consensus       220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         220 GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            1112234455667889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=3.5e-32  Score=284.76  Aligned_cols=238  Identities=27%  Similarity=0.331  Sum_probs=189.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .|+..+.||+|+||.||+|....++..+++|.+..    .....+++.+|+++++.++|+|++++++++......++|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            35666789999999999999988899999998754    22234568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+. |+|.+++.....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++..++.|..        
T Consensus        96 ~~~-~~l~~~~~~~~~---~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          96 YCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             ccC-CCHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            996 688887754332   38899999999999999999998   999999999999999999999997732        


Q ss_pred             cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                      ....|+..|+|||.+.   .+.++.++|||||||++|||++|+.||........   +..+             ......
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~-------------~~~~~~  232 (308)
T cd06634         169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHI-------------AQNESP  232 (308)
T ss_pred             ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH---HHHH-------------hhcCCC
Confidence            2235788999999874   35678899999999999999999999865322110   0000             000000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      ..........+.+++.+||+.+|.+||++.++++.-
T Consensus       233 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            111223456678899999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=5.8e-32  Score=285.69  Aligned_cols=258  Identities=20%  Similarity=0.221  Sum_probs=195.2

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CC
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KG  417 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~  417 (645)
                      ++...+++|+..+.||+|+||.||++....++..+|+|++...   ....+.+.+|++++.+++||||+++++++.. .+
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3455788999999999999999999999988999999987542   2345678899999999999999999998865 56


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++++||+ +++|.+++...     .+++.....++.|+++||+|||+   .+++||||||+||+++.++..++.|.. 
T Consensus        84 ~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~  154 (328)
T cd07856          84 DIYFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGL  154 (328)
T ss_pred             cEEEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccc
Confidence            789999998 67898888643     27888888999999999999999   999999999999999999999997732 


Q ss_pred             --------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~  560 (645)
                              ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.+..       .....
T Consensus       155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (328)
T cd07856         155 ARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC  234 (328)
T ss_pred             ccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence                    22356788999998866 568999999999999999999999997543211111111110       00000


Q ss_pred             cCchhHHhhh-hccCCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          561 EGRIIEAADK-RLNGAFNE-----DEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       561 ~~~~~~~~d~-~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .+...+.... ......+.     .....+.+++..|++.+|++||++.+++..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0111111111 00111111     124678899999999999999999999764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=2.4e-32  Score=289.56  Aligned_cols=254  Identities=24%  Similarity=0.301  Sum_probs=190.8

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC--CeE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK--GEL  419 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~--~~~  419 (645)
                      ..++|...+.||+|+||.||+|....++..+|+|++..   .......+.+|+.+++++ +|+||++++++|...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            35678888999999999999999988899999998754   223345677899999999 999999999998653  468


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||++ ++|..++...     .++|..+..++.|++.||+|||+   .+++||||||+||+++.++..|+.|..   
T Consensus        85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~  155 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLAR  155 (337)
T ss_pred             EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence            99999996 5999988654     38899999999999999999998   999999999999999999999998721   


Q ss_pred             --------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-----
Q 041096          497 --------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-----  556 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-----  556 (645)
                                    ....|+..|+|||.+.. ..++.++||||||+++|||++|+.||...........+.....     
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07852         156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE  235 (337)
T ss_pred             ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence                          11247888999998765 4578999999999999999999999975432211111111100     


Q ss_pred             --hhhccCchhHHhhhhccC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          557 --GLYAEGRIIEAADKRLNG------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       557 --~~~~~~~~~~~~d~~l~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        .........+.++.....      ....+....+.+++..||+.+|++|||+.++++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence              000000000111100000      0011135678899999999999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=5.9e-32  Score=281.12  Aligned_cols=245  Identities=19%  Similarity=0.238  Sum_probs=180.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCCcch------------hHhHHHHHHHHhhcCCCCeeeeeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHSHEG------------KTEFLAELSIIACLRHKNLVQLLGW  412 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~~~~------------~~~~~~Ei~~l~~l~H~niv~l~g~  412 (645)
                      ++|...++||+|+||.||+|....+   +..+|+|........            ......+...+..+.|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5788999999999999999998776   566777754332211            0112233445566789999999997


Q ss_pred             eeeCC----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          413 CAEKG----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       413 ~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      +....    ..++++|++. .++.+.+.....    .++..+..++.|+++||+|||+   .+++||||||+|||++.++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC----KNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHhhcc----CCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCC
Confidence            76543    4578888873 466666654321    5788889999999999999999   8999999999999999999


Q ss_pred             Ceeeecccc-------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh
Q 041096          489 NARLESSFT-------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV  549 (645)
Q Consensus       489 ~~kl~d~~~-------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~  549 (645)
                      .+++.|...                   ...||+.|+|||+..+..++.++|||||||++|||++|+.||..........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            999987221                   1358999999999999999999999999999999999999998653322111


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      .....  ..     +.......+   .....+..+.+++..|++.+|++||++.++++.|+
T Consensus       244 ~~~~~--~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        244 HAAKC--DF-----IKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHhHH--HH-----HHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            11100  00     001111111   11233577889999999999999999999998874

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-33  Score=295.02  Aligned_cols=237  Identities=22%  Similarity=0.375  Sum_probs=188.8

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEE---ecc--CCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--eEEEEEec
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVK---RSK--HSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--ELLLVYEY  425 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK---~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~Ey  425 (645)
                      ..+||+|.|-+||||.+..+|..||--   .-.  ......+.|..|+.+|+.|+|+||++++.++.+..  ..-+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            456999999999999999889888743   222  23444578999999999999999999999887654  47899999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeec----------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLES----------  494 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d----------  494 (645)
                      |..|+|+.|+++.+.    +..+...+++.||++||.|||+. .++|+|||||.+||+|+.+ |.+||||          
T Consensus       125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            999999999998776    78889999999999999999984 5899999999999999865 7799998          


Q ss_pred             cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       495 ~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      ......|||.|||||... ..|++..||||||+.++||+|+..||.......   .+...    ...|.....+.     
T Consensus       200 ~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A---QIYKK----V~SGiKP~sl~-----  266 (632)
T KOG0584|consen  200 HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA---QIYKK----VTSGIKPAALS-----  266 (632)
T ss_pred             ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH---HHHHH----HHcCCCHHHhh-----
Confidence            223358999999999887 789999999999999999999999997654321   11111    11111111111     


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ..   .-..+.+++..|+.. ..+|||+.|+++  +|..
T Consensus       267 kV---~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  267 KV---KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             cc---CCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            01   123567788999999 999999999997  5554

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4e-32  Score=288.99  Aligned_cols=262  Identities=19%  Similarity=0.246  Sum_probs=196.5

Q ss_pred             ccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      .....++...+++|...+.||+|+||.||+|....++..||+|++....   ...+.+.+|+.++.+++|+||+++++++
T Consensus         6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~   85 (345)
T cd07877           6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF   85 (345)
T ss_pred             hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence            3445677788899999999999999999999998889999999887532   2345688899999999999999999988


Q ss_pred             eeC------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC
Q 041096          414 AEK------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       414 ~~~------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~  487 (645)
                      ...      ...+++++++ +++|.+++...     .+++..+..++.|+++||+|||+   .+++||||||+||+++.+
T Consensus        86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~  156 (345)
T cd07877          86 TPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED  156 (345)
T ss_pred             eecccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence            643      3478888887 88998887543     28999999999999999999999   999999999999999999


Q ss_pred             CCeeeeccc---------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH--
Q 041096          488 FNARLESSF---------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV--  555 (645)
Q Consensus       488 ~~~kl~d~~---------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~--  555 (645)
                      +.+++.|..         ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+....  
T Consensus       157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (345)
T cd07877         157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT  236 (345)
T ss_pred             CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999998732         22357889999998876 568899999999999999999999996543221111111110  


Q ss_pred             -----HhhhccCchhH---HhhhhccCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          556 -----WGLYAEGRIIE---AADKRLNGAFN---EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       556 -----~~~~~~~~~~~---~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           ...........   .+.......+.   ......+.+++..|++.+|.+||++.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence                 00000000000   00000000000   012345788999999999999999999986

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-32  Score=278.71  Aligned_cols=252  Identities=22%  Similarity=0.270  Sum_probs=188.8

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhc---CCCCeeeeeeeeeeCCe-----
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACL---RHKNLVQLLGWCAEKGE-----  418 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~-----  418 (645)
                      |+..+.||+|+||.||+|..+.++..+|+|++....   .....+.+|+.++.++   +|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999998889999999987522   2234566788777666   59999999999988776     


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .+++|||+. ++|.+++.....  ..+++.++..++.|+++||+|||+   .+++|+||+|+||+++.++.+++.|..  
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~  154 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLA  154 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcc
Confidence            999999996 589998876432  248999999999999999999999   899999999999999999999998721  


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----hccCc
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----YAEGR  563 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~~~~~  563 (645)
                               ....++..|+|||++.+..++.++|||||||++|||++|+.||...........+.+.....    +....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         155 RIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             eeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence                     12346788999999999899999999999999999999999987644322111111110000    00000


Q ss_pred             --hhHHhhhhcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          564 --IIEAADKRLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       564 --~~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ..........   .....+....+.+++..||+.||.+||+++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence              0000000000   0111233466788999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=5e-32  Score=281.68  Aligned_cols=240  Identities=27%  Similarity=0.386  Sum_probs=187.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..+|||.+....  ....++..|+.++.+.. |+||++++++|.++...+++||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            56778899999999999999999889999999987532  33456777888777775 9999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+. ++|..++.....   .+++..+..++.|+++||+|||+  .++++||||+|+||+++.++..+|.|..        
T Consensus        95 ~~~-~~l~~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          95 LMS-TCLDKLLKRIQG---PIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             ccC-cCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            984 577777655332   48999999999999999999996  2589999999999999999999998732        


Q ss_pred             ---cccccCCcccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 ---TLTAGTMGYLAPEYLQYGT----ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~----~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                         ....++..|+|||.+.+..    ++.++||||||+++|||++|+.||......  . .....            .++
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~-~~~~~------------~~~  233 (296)
T cd06618         169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--F-EVLTK------------ILQ  233 (296)
T ss_pred             CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--H-HHHHH------------Hhc
Confidence               1224677899999987654    789999999999999999999999653211  0 11111            111


Q ss_pred             hhcc-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          570 KRLN-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       570 ~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      .... ..........+.+++.+||+.+|.+||+++++++.
T Consensus       234 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         234 EEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1100 00111235568889999999999999999999863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.2e-32  Score=279.71  Aligned_cols=235  Identities=23%  Similarity=0.314  Sum_probs=195.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...+.||+|+||.||+|....++..+++|++...    ....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4688889999999999999999888999999988652    233567889999999998 99999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+++++|.+++.+..    .+++..++.++.|++.||.|||+   .+++|+||||+||+++.++..++.|...     
T Consensus        81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            99999999999997654    39999999999999999999998   9999999999999999999999877211     


Q ss_pred             ---------------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhh
Q 041096          498 ---------------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN  550 (645)
Q Consensus       498 ---------------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~  550 (645)
                                                 ...++..|+|||......++.++||||||++++|+++|+.||.......    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----  229 (280)
T cd05581         154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----  229 (280)
T ss_pred             CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----
Confidence                                       1235788999999998889999999999999999999999997643211    


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM----RRVFQ  607 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~~vl~  607 (645)
                      ...            ...  ......+......+.+++..||+.+|.+||++    +++++
T Consensus       230 ~~~------------~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         230 TFQ------------KIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHH------------HHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            111            011  11112333446678899999999999999999    76654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=1e-32  Score=276.78  Aligned_cols=251  Identities=23%  Similarity=0.290  Sum_probs=203.6

Q ss_pred             HHHHHHhcCCCcCceeccCCceEEEEEEECCC-----CeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          341 RELRSATRGFHSNRILGRGAFGNVYKAYFASS-----GSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      ++|.....+++...++-+|.||.||+|.+.+.     .+.|.+|..+.  +.-....++.|.-++..+.|||+..+.|.|
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            45555556788889999999999999977643     23456676655  333456788999999999999999999998


Q ss_pred             eeC-CeEEEEEecCCCCCHhHHhhhcCC----CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          414 AEK-GELLLVYEYMPNGSLDRMLYQDSE----NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       414 ~~~-~~~~lV~Ey~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      .+. +..+.+|.++.-|+|..+|...+.    ..+.++-.+...++.|++.||+|||.   ++++|.||.++|+++|+..
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQL  433 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhhe
Confidence            765 567999999999999999984332    23457888999999999999999999   9999999999999999999


Q ss_pred             Ceeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHH
Q 041096          489 NARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       489 ~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~  553 (645)
                      .+|+.|..              ........||+||.+....|+.++|||||||+||||+| |+.||...+..+..     
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~-----  508 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME-----  508 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH-----
Confidence            99997721              11224568999999999999999999999999999999 99999876543322     


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                                  ..+.+..+-..+-+|+++++.+|.-||...|++||+++|++.-|.+
T Consensus       509 ------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  509 ------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             ------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence                        2223333445677899999999999999999999999999987753

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.7e-33  Score=269.07  Aligned_cols=240  Identities=24%  Similarity=0.352  Sum_probs=193.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-----cc----hhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HE----GKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----~~----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      -+.|...+.||.|..+.|-++..+.++...|+|++...     .+    -.+.-.+|+.+|+++ .||+|+.+.++++..
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            35678889999999999999999999999999987541     11    123456799999998 599999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-  495 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-  495 (645)
                      ..+++|+|.|+.|-|.++|...-    .++.....+|+.|+.+|++|||.   ..|+||||||+|||+|++.+.+|+|. 
T Consensus        96 sF~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccc
Confidence            99999999999999999997654    38999999999999999999999   99999999999999999999999882 


Q ss_pred             ----------ccccccCCcccCcccccC------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh
Q 041096          496 ----------FTLTAGTMGYLAPEYLQY------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                                ....|||++|+|||.+..      ..|+...|+||+||++|-|+.|..||....+--...        +.
T Consensus       169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR--------~I  240 (411)
T KOG0599|consen  169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLR--------MI  240 (411)
T ss_pred             eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHH--------HH
Confidence                      234589999999998864      357889999999999999999999997532211000        00


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+|+.      .....-=.+....+.+++.+|++.||.+|.|++|+++
T Consensus       241 meGky------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  241 MEGKY------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             Hhccc------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            11100      0001111233456788899999999999999999976

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=1.2e-31  Score=276.37  Aligned_cols=231  Identities=25%  Similarity=0.326  Sum_probs=181.7

Q ss_pred             eeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHH---HhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSI---IACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~---l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +||+|+||.||++....+++.||+|.+....    .....+..|..+   ++...|+||+++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999998889999999876522    122234444443   444579999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------c
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------T  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------~  497 (645)
                      +++|..++....    .+++..+..++.|+++||+|||+   .+++||||||+||+++.++..++.|..          .
T Consensus        81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~  153 (278)
T cd05606          81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  153 (278)
T ss_pred             CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence            999999886543    38999999999999999999999   999999999999999999999997732          1


Q ss_pred             ccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          498 LTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...|+..|+|||.+.++ .++.++||||+|+++|||++|+.||......... . ...             .........
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-~-~~~-------------~~~~~~~~~  218 (278)
T cd05606         154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-E-IDR-------------MTLTMAVEL  218 (278)
T ss_pred             CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-H-HHH-------------HhhccCCCC
Confidence            23589999999998754 6899999999999999999999999764221110 0 000             000111122


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      +......+.+++..|+..+|.+||     ++.++++
T Consensus       219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            333456788888999999999999     9999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.5e-33  Score=294.43  Aligned_cols=234  Identities=26%  Similarity=0.344  Sum_probs=195.3

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ...||.|+||+||++..++++...|-|.+.. +.+..++|+-||++|....||+||+|++.|.-.+.++|+.|||.||..
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV  116 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV  116 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence            4568999999999999998888888887765 566678999999999999999999999999989999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc------------cccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS------------FTLT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~------------~~~~  499 (645)
                      +..+-.-..   .|+..++..+++|++.||.|||+   +.|||||||+.|||++-+|.+++.|.            ....
T Consensus       117 DaimlEL~r---~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF  190 (1187)
T KOG0579|consen  117 DAIMLELGR---VLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF  190 (1187)
T ss_pred             hHHHHHhcc---ccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence            998865443   49999999999999999999999   99999999999999999999999872            2345


Q ss_pred             ccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          500 AGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       500 ~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                      .||++|||||+..     .++|+.++||||||+.|.||+.+.+|....+.   +..++.....          --|.|  
T Consensus       191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---MRVllKiaKS----------ePPTL--  255 (1187)
T KOG0579|consen  191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKS----------EPPTL--  255 (1187)
T ss_pred             cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---HHHHHHHhhc----------CCCcc--
Confidence            7999999999875     46799999999999999999999999765432   1111111100          01111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+......+.++...|+..||..||++.++++
T Consensus       256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            235567778889999999999999999999986

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.98  E-value=6.8e-33  Score=282.90  Aligned_cols=233  Identities=25%  Similarity=0.362  Sum_probs=195.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.|+.-++||+||||.||-+..+.+|..+|+|++.+    .+......++|-.+|.+++.+.||.+--.++..+.+|||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            568888999999999999999999999999998765    3445667889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec---------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d---------  494 (645)
                      ..|.||+|.-+|.+...  ..++.....-.+.+|+.||++||.   .+||.|||||+|||||+.+.++|+|         
T Consensus       265 tlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~  339 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE  339 (591)
T ss_pred             EeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence            99999999999987664  338999999999999999999999   9999999999999999999999988         


Q ss_pred             --cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          495 --SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       495 --~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                        .....+||.+|||||++..+.|+...|.||+||+||||+.|+.||....+..                 -.+.+|.+.
T Consensus       340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-----------------k~eEvdrr~  402 (591)
T KOG0986|consen  340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-----------------KREEVDRRT  402 (591)
T ss_pred             CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-----------------hHHHHHHHH
Confidence              2334589999999999999999999999999999999999999996532211                 112233332


Q ss_pred             c---CCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          573 N---GAFNEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       573 ~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                      .   .+++....+....+....++.||++|.-.
T Consensus       403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             hcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            2   23444445556666677789999998653

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=4.9e-32  Score=278.82  Aligned_cols=251  Identities=23%  Similarity=0.300  Sum_probs=191.8

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |+..+.||+|++|.||+|+...++..+++|.+...   ....+.+..|+.++++++|+|++++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            45567899999999999999988999999988763   333467889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      + ++|.+++....   ..+++..+..++.|+++||+|||+   .+++||||+|+||+++.++.+++.|..          
T Consensus        81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence            7 59999998653   238999999999999999999999   999999999999999999999998721          


Q ss_pred             --cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------HhhhccCchhH
Q 041096          497 --TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYAEGRIIE  566 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~  566 (645)
                        ....++..|+|||.+... .++.++|||||||++|||++|+.||...........+....       |.....-...+
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (282)
T cd07829         154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK  233 (282)
T ss_pred             ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence              122346779999998776 78999999999999999999999997644221111111100       00000000000


Q ss_pred             HhhhhccC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNG----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..-+....    .........+.+++..||..+|++||++++++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            00000000    000112457899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.98  E-value=2.1e-31  Score=283.15  Aligned_cols=267  Identities=18%  Similarity=0.247  Sum_probs=197.7

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC---
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG---  417 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~---  417 (645)
                      ....++|+..+.||+|+||.||++....++..||||++...   ......+.+|++++++++|+||+++++++....   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            34567899999999999999999999888999999988642   223456889999999999999999999887543   


Q ss_pred             ---eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          418 ---ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       418 ---~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                         ..++||||+ +++|.+++...     .+++..+..++.|+++||+|||+   .+|+||||||+||+++.++..++.|
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~d  161 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILD  161 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEee
Confidence               469999999 78999888642     38999999999999999999999   9999999999999999999999977


Q ss_pred             cc---------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hh
Q 041096          495 SF---------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WG  557 (645)
Q Consensus       495 ~~---------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~  557 (645)
                      ..         ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+....       ..
T Consensus       162 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07880         162 FGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ  241 (343)
T ss_pred             cccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            22         12356889999999876 458899999999999999999999997643221111111100       00


Q ss_pred             hhccCchhHHhhh--hcc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCCC
Q 041096          558 LYAEGRIIEAADK--RLN----GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVP  619 (645)
Q Consensus       558 ~~~~~~~~~~~d~--~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~p  619 (645)
                      .............  ...    .....+....+.+++..|++.+|++|||+.++++  .++...+....+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~  311 (343)
T cd07880         242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDET  311 (343)
T ss_pred             hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccccc
Confidence            0000000000000  000    0011123345788999999999999999999984  566554444433

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=6.1e-32  Score=301.01  Aligned_cols=258  Identities=20%  Similarity=0.221  Sum_probs=181.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeE-EE------------------EEeccCCcchhHhHHHHHHHHhhcCCCCe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSV-AA------------------VKRSKHSHEGKTEFLAELSIIACLRHKNL  406 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~-va------------------vK~~~~~~~~~~~~~~Ei~~l~~l~H~ni  406 (645)
                      ..++|+..+.||+|+||+||++..+..... .+                  .|...........+.+|+.++++++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            356899999999999999999876432211 11                  12222223345568899999999999999


Q ss_pred             eeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCC-CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       407 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      +++++++...+..|+|+|++ .++|.+++...... .......+...++.|++.||+|||+   .+|+||||||+||||+
T Consensus       226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence            99999999999999999999 56788877643311 1123456677899999999999999   9999999999999999


Q ss_pred             CCCCeeeecccc-------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHH
Q 041096          486 ANFNARLESSFT-------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV  552 (645)
Q Consensus       486 ~~~~~kl~d~~~-------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~  552 (645)
                      .++.+||.|...             ...||..|+|||++.+..++.++|||||||++|||++|..++...........+.
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            999999987311             2368999999999999999999999999999999999876443222211111222


Q ss_pred             HHHHhhh--cc------CchhHHhhhhccCCCC---H------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          553 DWVWGLY--AE------GRIIEAADKRLNGAFN---E------DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       553 ~~~~~~~--~~------~~~~~~~d~~l~~~~~---~------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +......  ..      .++.+.++........   .      .....+.+++.+|++.||++|||+.|+++
T Consensus       382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            2111100  00      0011111100000000   0      11234566788999999999999999987

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.98  E-value=5.5e-32  Score=282.70  Aligned_cols=253  Identities=25%  Similarity=0.295  Sum_probs=186.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-------  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-------  416 (645)
                      .++|+..++||+|+||.||+|....++..+|+|++...   ......+.+|++++++++|+||+++++++.+.       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            57899999999999999999999888999999987542   22234678999999999999999999987543       


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                       ..+++|+||+. ++|...+....   ..+++.++..++.|+++||+|||+   .+++||||||+||+++.++..++.|.
T Consensus        87 ~~~~~lv~~~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~df  159 (311)
T cd07866          87 RGSVYMVTPYMD-HDLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADF  159 (311)
T ss_pred             CceEEEEEecCC-cCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcC
Confidence             35799999995 47777776433   238999999999999999999999   99999999999999999999999772


Q ss_pred             c-----------------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          496 F-----------------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       496 ~-----------------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                      .                       ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~  239 (311)
T cd07866         160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI  239 (311)
T ss_pred             ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            1                       11235677999998765 45799999999999999999999999764432111111


Q ss_pred             HHHHHhhhccC------chhHHhhhhccCCCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          552 VDWVWGLYAEG------RIIEAADKRLNGAFN-------EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       552 ~~~~~~~~~~~------~~~~~~d~~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ... .......      .+....+.......+       ......+.+++..|++.+|++|||+.+++.
T Consensus       240 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         240 FKL-CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHH-hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            110 0000000      000000000000000       112256788999999999999999999874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=1.2e-31  Score=277.40  Aligned_cols=243  Identities=25%  Similarity=0.303  Sum_probs=191.9

Q ss_pred             CCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC-----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS-----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~  419 (645)
                      +|+..+.||+|++|.||++...   .++..+|||.+...     ....+.+.+|+.++.++ +|+||+++++.+..++..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4677889999999999999863   35678999988652     22345688999999999 599999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++++|.+++....    .+++.....++.|+++||.|||+   .+++||||||+||+++.++..++.|..   
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583          81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence            99999999999999987543    38899999999999999999998   999999999999999999999987731   


Q ss_pred             ----------cccccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~--~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                ....|+..|+|||.+.+..  .+.++||||||+++|||++|..||...........+..   .       
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~---~-------  223 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR---R-------  223 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH---H-------
Confidence                      1124788999999987665  78899999999999999999999864321111111111   0       


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                        ....  ....+......+.+++.+||+.+|++|||++++.+.|+..
T Consensus       224 --~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         224 --ILKS--KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             --HHcc--CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence              0000  1122223345677889999999999999999998887753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.98  E-value=6.5e-32  Score=285.21  Aligned_cols=260  Identities=21%  Similarity=0.260  Sum_probs=198.6

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-----eEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-----ELL  420 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~  420 (645)
                      +|...+.||+|++|.||+|....++..+++|++...   ....+.+.+|+.+++.++|+||+++++++...+     ..|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            477889999999999999999888999999988763   334567999999999999999999999998775     789


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ++|||++ ++|.+++....    .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+++.|.     
T Consensus        81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~  152 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARG  152 (330)
T ss_pred             EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence            9999997 58988886543    48999999999999999999999   99999999999999999999999761     


Q ss_pred             ----------ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-------h
Q 041096          496 ----------FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-------G  557 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-------~  557 (645)
                                .....++..|+|||.+.+. .++.++||||||+++|||++|+.||...........+.....       .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence                      1123467889999999887 789999999999999999999999976543221111111100       0


Q ss_pred             hhccCchhHHhhhhc-cC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          558 LYAEGRIIEAADKRL-NG-----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l-~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                      ........+.+...- ..     .........+.+++..||+.+|.+||+++++++  .+++...++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~  299 (330)
T cd07834         233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE  299 (330)
T ss_pred             hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence            000001111111000 00     001123466889999999999999999999998  466554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.98  E-value=8.5e-32  Score=285.09  Aligned_cols=250  Identities=22%  Similarity=0.275  Sum_probs=188.5

Q ss_pred             cCCCc-CceeccCCceEEEEEEECCCCeEEEEEeccCCcchh---------------HhHHHHHHHHhhcCCCCeeeeee
Q 041096          348 RGFHS-NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---------------TEFLAELSIIACLRHKNLVQLLG  411 (645)
Q Consensus       348 ~~f~~-~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~---------------~~~~~Ei~~l~~l~H~niv~l~g  411 (645)
                      ++|.. .+.||+|+||.||+|.....+..||+|.+.......               ..+.+|++++++++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            44543 467999999999999998889999999876532211               24789999999999999999999


Q ss_pred             eeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       412 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      ++...+..++||||+. |+|.+++....    .+++.....++.|++.||+|||+   .+++||||||+||+++.++.++
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~k  159 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICK  159 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEE
Confidence            9999999999999996 69999986543    38899999999999999999998   9999999999999999999999


Q ss_pred             eecccc--------------------------ccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          492 LESSFT--------------------------LTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       492 l~d~~~--------------------------~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                      +.|...                          ...++..|+|||.+.+. .++.++|||||||++|||++|+.||.....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~  239 (335)
T PTZ00024        160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE  239 (335)
T ss_pred             ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            977221                          12357789999998764 468999999999999999999999976543


Q ss_pred             ccchhhHHHHHHhhhccCchhHHh--------h----hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          545 GHKMVNLVDWVWGLYAEGRIIEAA--------D----KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       545 ~~~~~~l~~~~~~~~~~~~~~~~~--------d----~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+....+...... .......+..        .    +.+. .........+.+++..|++.+|++||++++++.
T Consensus       240 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        240 IDQLGRIFELLGT-PNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHHHHHHHHhCC-CchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            2221111111100 0000000000        0    0000 001122456788999999999999999999986

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=7.3e-32  Score=278.13  Aligned_cols=246  Identities=23%  Similarity=0.344  Sum_probs=207.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .+-|+..+.||+|.|..|-++++--+|+.||||++.+.+   .....+..|++.|+-++|||||+||.+......+|||+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            345777788999999999999998899999999998743   34567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE-cCCCCeeeec--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML-DANFNARLES--------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll-d~~~~~kl~d--------  494 (645)
                      |+-.+|+|.+|+-+....   +......+.+.||..|+.|+|+   ..+|||||||+||.. ..-+-+|+.|        
T Consensus        97 ELGD~GDl~DyImKHe~G---l~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEEG---LNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             EecCCchHHHHHHhhhcc---ccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence            999999999999877654   8899999999999999999999   999999999999865 4556677765        


Q ss_pred             ---cccccccCCcccCcccccCCCCC-cchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          495 ---SFTLTAGTMGYLAPEYLQYGTAT-EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       495 ---~~~~~~gt~~y~APE~~~~~~~t-~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                         ..+..+|+..|-|||++.+..|+ ++.||||+|||||-|++|+.||+..++.+....                ++|-
T Consensus       171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm----------------ImDC  234 (864)
T KOG4717|consen  171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM----------------IMDC  234 (864)
T ss_pred             CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh----------------hhcc
Confidence               34556899999999999999885 689999999999999999999998766543333                3333


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                      +.  ..+......+.+|+..|+..||++|.+.++++.  .|+...+.+
T Consensus       235 KY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~  280 (864)
T KOG4717|consen  235 KY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL  280 (864)
T ss_pred             cc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence            33  456677888999999999999999999999875  466554444

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.98  E-value=2.8e-31  Score=275.01  Aligned_cols=238  Identities=23%  Similarity=0.273  Sum_probs=188.1

Q ss_pred             CCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCCc-----chhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHSH-----EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~~-----~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~  419 (645)
                      +|+..+.||+|+||.||++...   .++..+|+|++....     ...+.+.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4677889999999999999874   367899999886522     2346688899999999 599999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++++|.+++....    .+++.....++.|+++||.|||+   .+++||||||+|||++.++..++.|..   
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613          81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence            99999999999999997643    38899999999999999999998   999999999999999999999998721   


Q ss_pred             ----------cccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ----------TLTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                ....|+..|+|||.+...  .++.++||||||+++|||++|+.||...........+..   .       
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~---~-------  223 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR---R-------  223 (290)
T ss_pred             ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH---H-------
Confidence                      123478899999998753  468899999999999999999999964322111111111   0       


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                         +... ...++......+.+++..||+.+|++||     ++++++.
T Consensus       224 ---~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         224 ---ILKS-EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             ---hhcc-CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence               0000 1123333456778899999999999997     6677655

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.4e-31  Score=282.79  Aligned_cols=254  Identities=19%  Similarity=0.256  Sum_probs=192.5

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe---
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE---  418 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~---  418 (645)
                      ...++|...+.||+|++|.||+|....++..+|+|++...   ....+.+.+|+.++++++|+||+++++++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            3467899999999999999999999988999999987652   2234567789999999999999999998876554   


Q ss_pred             ---EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          419 ---LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       419 ---~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                         .++|+||+ +++|.+++...     .+++..+..++.|+++||+|||+   .+++||||||+||+++.++..++.|.
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~df  162 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDF  162 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccc
Confidence               89999999 67999988642     38999999999999999999999   99999999999999999999999872


Q ss_pred             c---------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhh
Q 041096          496 F---------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGL  558 (645)
Q Consensus       496 ~---------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~  558 (645)
                      .         ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.+..       +..
T Consensus       163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  242 (343)
T cd07851         163 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK  242 (343)
T ss_pred             cccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence            2         22357888999999865 367899999999999999999999997543221111111110       000


Q ss_pred             hccCchhHHhhhhcc---CCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLN---GAFN---EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~---~~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .........+.....   ..+.   ......+.+++..|++++|++|||+.+|++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            000001111110000   0000   112457889999999999999999999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=5.5e-31  Score=279.90  Aligned_cols=250  Identities=21%  Similarity=0.250  Sum_probs=185.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC----------
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK----------  416 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~----------  416 (645)
                      .+|...+.||+|+||.||+|....++..||+|.+... ....+.+.+|++++++++|+||+++++.+...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            6788899999999999999999988999999987653 34456788999999999999999999776543          


Q ss_pred             ----CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCee
Q 041096          417 ----GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNAR  491 (645)
Q Consensus       417 ----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~k  491 (645)
                          ...++||||++ ++|.+++...     .+++.....++.|+++||.|||+   .+++||||||+||+++. +...+
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEE
Confidence                35799999996 5898888543     28899999999999999999998   99999999999999985 44567


Q ss_pred             eeccc---------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH
Q 041096          492 LESSF---------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       492 l~d~~---------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~  555 (645)
                      +.|..               ....++..|+|||.+.. ..++.++|||||||++|||++|+.||.............+..
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~  235 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV  235 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            76521               11246778999998754 567899999999999999999999997643322111111100


Q ss_pred             Hhhhcc---CchhHHhhhhc-----cCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          556 WGLYAE---GRIIEAADKRL-----NGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       556 ~~~~~~---~~~~~~~d~~l-----~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .....   ..........+     ....     .......+.+++..|++.+|.+|||+.++++
T Consensus       236 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         236 -PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             -CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence             00000   00000000000     0000     0112356778999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=1.1e-30  Score=276.50  Aligned_cols=251  Identities=20%  Similarity=0.234  Sum_probs=185.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCC--CeEEEEEeccCC---cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC----Ce
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASS--GSVAAVKRSKHS---HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK----GE  418 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~--~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~----~~  418 (645)
                      +|+..+.||+|+||.||++.....  +..+|+|++...   ....+.+.+|+++++++ +|+||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            477788999999999999999877  889999987652   22345788999999999 599999999875432    45


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .++++||+. ++|.+++....    .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++|.|..  
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a  152 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLA  152 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence            788999985 68999886543    38999999999999999999999   999999999999999999999997722  


Q ss_pred             --------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-----
Q 041096          497 --------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-----  556 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-----  556 (645)
                                    ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...........+.....     
T Consensus       153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  232 (332)
T cd07857         153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE  232 (332)
T ss_pred             eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence                          11357889999998765 4689999999999999999999999875432111111111000     


Q ss_pred             --hhhccCchhHHhhh---hccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          557 --GLYAEGRIIEAADK---RLNG---AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       557 --~~~~~~~~~~~~d~---~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ..............   .-..   .........+.+++..|++.+|++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence              00000000000000   0000   000112356888999999999999999999975

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=5e-31  Score=266.34  Aligned_cols=224  Identities=27%  Similarity=0.313  Sum_probs=186.5

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ||+|+||.||++.....+..+++|.+....    .....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999998889999999876632    2455789999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------ccc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------TLT  499 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------~~~  499 (645)
                      .+++....    .+++.....++.|++.||.|||+   .+++|+||+|+||+++.++..+++|..            ...
T Consensus        81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  153 (250)
T cd05123          81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF  153 (250)
T ss_pred             HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence            99997654    38999999999999999999999   999999999999999999999997721            223


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      .++..|++||...+...+.++|+||||+++|||++|+.||.....    ......+            ...  ....+..
T Consensus       154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~------------~~~--~~~~~~~  215 (250)
T cd05123         154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKI------------LKD--PLRFPEF  215 (250)
T ss_pred             cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHH------------hcC--CCCCCCC
Confidence            578899999999988899999999999999999999999965432    1111110            011  1123333


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      ....+.+++..||..+|++||++.+
T Consensus       216 ~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         216 LSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCHHHHHHHHHHhcCCHhhCCCccc
Confidence            3567788999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7.3e-33  Score=312.56  Aligned_cols=238  Identities=26%  Similarity=0.363  Sum_probs=195.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      -++.....||.|.||.||-|...++|+..|+|-++-   .....+...+|+.++..|+|||+|+++|+-.++++.+|.||
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            355667889999999999999999999999997654   23335678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      ||.+|+|.+.+...+.    .+.......-.|++.|++|||+   ++||||||||.||+||.++..|.+|...       
T Consensus      1315 yC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            9999999999987654    5666667788999999999999   9999999999999999999999988322       


Q ss_pred             ---------ccccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          498 ---------LTAGTMGYLAPEYLQYGT---ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       498 ---------~~~gt~~y~APE~~~~~~---~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                               ...||+-|||||++.+.+   ...+.||||+|||++||+||++||...+..        |..        +
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--------~aI--------M 1451 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--------WAI--------M 1451 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--------hHH--------H
Confidence                     246999999999998654   456899999999999999999999765431        211        1


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      -.+...-...+++.....-.+++..|+..||++|.++.|+++.
T Consensus      1452 y~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1452 YHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            1111122234555556666778889999999999999888764

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=260.72  Aligned_cols=258  Identities=20%  Similarity=0.338  Sum_probs=199.9

Q ss_pred             CHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeC
Q 041096          339 SYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEK  416 (645)
Q Consensus       339 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~  416 (645)
                      +++|+.+.|.     ++||+|+++.|-.++...++..+|||++.+ ....+....+|++++.+.+ |+||++|+.|++++
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            4677777764     679999999999999988999999999987 5556778899999999885 99999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeee
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLE  493 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~  493 (645)
                      ..+|||||-|.+|+|..+++++..    ++..+..++.++|+.||.|||.   ++|.||||||+|||-..-.   -+||.
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~----F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiC  221 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKH----FNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKIC  221 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeee
Confidence            999999999999999999987664    8899999999999999999999   9999999999999974332   34554


Q ss_pred             c-------------------cccccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh
Q 041096          494 S-------------------SFTLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV  549 (645)
Q Consensus       494 d-------------------~~~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~  549 (645)
                      |                   .....+|+..|||||+..     ...|+.++|.||+|||||-|++|..||.+.-..+.  
T Consensus       222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--  299 (463)
T KOG0607|consen  222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--  299 (463)
T ss_pred             ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC--
Confidence            4                   223357889999999764     34689999999999999999999999987644321  


Q ss_pred             hHHHHHHhhhccCchhHHhhh----hccC---CCCHHH----HHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADK----RLNG---AFNEDE----MKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~----~l~~---~~~~~~----~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                              -|..|+.-+....    .++.   +++.++    .....+++...+-.++.+|.++.+++.  .+....+..
T Consensus       300 --------GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ek  371 (463)
T KOG0607|consen  300 --------GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEK  371 (463)
T ss_pred             --------CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhc
Confidence                    1233332222222    2211   344432    234455666677799999999999887  344444443


Q ss_pred             CC
Q 041096          617 VV  618 (645)
Q Consensus       617 ~~  618 (645)
                      .+
T Consensus       372 al  373 (463)
T KOG0607|consen  372 AL  373 (463)
T ss_pred             cC
Confidence            33

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.6e-31  Score=283.71  Aligned_cols=236  Identities=22%  Similarity=0.314  Sum_probs=196.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ...|.+.+.||+|.|++|.+|++..++..||||.+.++.   ...+.+.+|+++|..|+|||||+++.+......+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            467888999999999999999999999999999988743   23455889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ||+.+|.+.+||.+...    +.......++.|+.++++|||+   +.|+|||||++||||+.+++.||+|.        
T Consensus       135 eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecc
Confidence            99999999999988765    4557888899999999999999   99999999999999999999999882        


Q ss_pred             ---ccccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          496 ---FTLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                         ....+|++.|.|||++.+..| .+++|+||+|++||-|++|..||++..-..    +-            ...+..+
T Consensus       208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~----Lr------------~rvl~gk  271 (596)
T KOG0586|consen  208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE----LR------------PRVLRGK  271 (596)
T ss_pred             cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc----cc------------chheeee
Confidence               234589999999999998877 689999999999999999999998743211    10            0111111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ++  .+.-....+-+++...+-++|.+|++++++.+
T Consensus       272 ~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  272 YR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ec--ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            11  11122334556667888999999999999976

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-31  Score=257.30  Aligned_cols=235  Identities=26%  Similarity=0.408  Sum_probs=185.8

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      ...||.|.+|.|+++..+.+|...|||.+...  .+..+.++..++++.+-. +|.||+.+|||..+...++.||.| ..
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-ST  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HH
Confidence            45699999999999999999999999998873  445567788888876664 899999999999999999999998 33


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------ccc
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------FTL  498 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------~~~  498 (645)
                      -++.+|..-..   ++++..+-++...+.+||.||.+  +++|+|||+||+|||+|+.++.|+.|.           .+.
T Consensus       176 C~ekLlkrik~---piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr  250 (391)
T KOG0983|consen  176 CAEKLLKRIKG---PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR  250 (391)
T ss_pred             HHHHHHHHhcC---CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence            45555554332   38888888999999999999998  599999999999999999999999872           334


Q ss_pred             cccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          499 TAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       499 ~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ..|-+.|||||.+..   .+|+.++||||||+.|+||+||+.||.....+-   ..+..+.         +..-|.|.+.
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---e~ltkvl---------n~ePP~L~~~  318 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF---EVLTKVL---------NEEPPLLPGH  318 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH---HHHHHHH---------hcCCCCCCcc
Confidence            578899999999864   478999999999999999999999998753221   1111111         1111233221


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .  .....+.++...|++.|+.+||...++++
T Consensus       319 ~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  319 M--GFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             c--CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            1  13556788889999999999999999886

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.3e-30  Score=262.19  Aligned_cols=211  Identities=19%  Similarity=0.165  Sum_probs=172.1

Q ss_pred             CCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhc
Q 041096          359 GAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD  438 (645)
Q Consensus       359 G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~  438 (645)
                      |.+|.||++....++..+|+|++....    .+..|...+....||||+++++++.+.+..++||||+++|+|.+++.+.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   79 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF   79 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence            789999999999999999999987643    2344555566667999999999999999999999999999999999764


Q ss_pred             CCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------ccccCCcccCcc
Q 041096          439 SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------LTAGTMGYLAPE  509 (645)
Q Consensus       439 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------~~~gt~~y~APE  509 (645)
                      ..    +++.....++.|+++||+|||+   ++++||||||+||+++.++..++.|...         ...++..|+|||
T Consensus        80 ~~----l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE  152 (237)
T cd05576          80 LN----IPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE  152 (237)
T ss_pred             cC----CCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence            32    8999999999999999999998   9999999999999999999999877321         234567799999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHH
Q 041096          510 YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGL  589 (645)
Q Consensus       510 ~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  589 (645)
                      ......++.++||||+|+++|||++|+.|+........                      .......+......+.+++.
T Consensus       153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~li~  210 (237)
T cd05576         153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------------------THTTLNIPEWVSEEARSLLQ  210 (237)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------------------cccccCCcccCCHHHHHHHH
Confidence            99888899999999999999999999988753211000                      00000122233456788899


Q ss_pred             HccCCCCCCCCCH
Q 041096          590 SCANPDSSARPSM  602 (645)
Q Consensus       590 ~Cl~~dP~~RPt~  602 (645)
                      +|++.||++||++
T Consensus       211 ~~l~~dp~~R~~~  223 (237)
T cd05576         211 QLLQFNPTERLGA  223 (237)
T ss_pred             HHccCCHHHhcCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.3e-31  Score=276.54  Aligned_cols=236  Identities=22%  Similarity=0.351  Sum_probs=183.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.|+..++||+||.+.||++...+ ...+|+|+...   ..+...-|.+|+..|.+|+ |.+||+|++|-..++.+||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            457788999999999999998765 45667766544   3445677999999999995 999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ||= ..+|..+|.++...  ...| .+..+..|++.++.++|+   .+|||.||||.|+|+-. |..||.|.        
T Consensus       440 E~G-d~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  440 ECG-DIDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP  511 (677)
T ss_pred             ecc-cccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence            986 67999999876543  2345 777899999999999999   99999999999998754 44555551        


Q ss_pred             ------ccccccCCcccCcccccCCC-----------CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 ------FTLTAGTMGYLAPEYLQYGT-----------ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~~-----------~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                            ....+||+.||+||.+....           ...+|||||+||+||+|+.|+.||....      +...     
T Consensus       512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~------n~~a-----  580 (677)
T KOG0596|consen  512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII------NQIA-----  580 (677)
T ss_pred             cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH------HHHH-----
Confidence                  12357999999999885432           4679999999999999999999996421      1111     


Q ss_pred             hccCchhHHhhhhccCCCCHHH-HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNEDE-MKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ++..+.++.-.-+++.-. ...+.++|..||..||.+|||..++++
T Consensus       581 ----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  581 ----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             ----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence                234445553333333221 222899999999999999999999986

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=7.8e-31  Score=295.04  Aligned_cols=242  Identities=25%  Similarity=0.371  Sum_probs=184.8

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee------
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE------  415 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~------  415 (645)
                      .+-..+|++..+||+||||.||+++.+-+|+.||||++...  ........+|+.++++|+|||||+++..+.+      
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            34567899999999999999999999999999999998774  4445678899999999999999999631100      


Q ss_pred             -----------------------------------------------------------C--------------------
Q 041096          416 -----------------------------------------------------------K--------------------  416 (645)
Q Consensus       416 -----------------------------------------------------------~--------------------  416 (645)
                                                                                 +                    
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                       0                    


Q ss_pred             ----------------------------------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHH
Q 041096          417 ----------------------------------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT  462 (645)
Q Consensus       417 ----------------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~  462 (645)
                                                        ..+||=||||+..+|+.++..+.-.   -.....++++.+|++||+
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLa  711 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLA  711 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHH
Confidence                                              1257789999888888888765421   135667899999999999


Q ss_pred             HHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------------------------------cccccccCCcccCccccc
Q 041096          463 YLHQECEQQVIHRDIKASNIMLDANFNARLES------------------------------SFTLTAGTMGYLAPEYLQ  512 (645)
Q Consensus       463 yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------------------------------~~~~~~gt~~y~APE~~~  512 (645)
                      |+|+   ++||||||||.||+||++..+||+|                              ..+..+||.-|+|||++.
T Consensus       712 YIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~  788 (1351)
T KOG1035|consen  712 YIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS  788 (1351)
T ss_pred             HHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence            9999   9999999999999999999999987                              223457999999999997


Q ss_pred             CC---CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHH
Q 041096          513 YG---TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGL  589 (645)
Q Consensus       513 ~~---~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  589 (645)
                      +.   +|+.|+|+||+|||++||+.   ||...   .+....+    ..++.+.+..-      ..+..+....=..++.
T Consensus       789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts---MERa~iL----~~LR~g~iP~~------~~f~~~~~~~e~slI~  852 (1351)
T KOG1035|consen  789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS---MERASIL----TNLRKGSIPEP------ADFFDPEHPEEASLIR  852 (1351)
T ss_pred             ccccccccchhhhHHHHHHHHHHhc---cCCch---HHHHHHH----HhcccCCCCCC------cccccccchHHHHHHH
Confidence            64   49999999999999999986   55421   1111111    11112211111      1233444555667889


Q ss_pred             HccCCCCCCCCCHHHHHH
Q 041096          590 SCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       590 ~Cl~~dP~~RPt~~~vl~  607 (645)
                      ++++.||.+|||+.|++.
T Consensus       853 ~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  853 WLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHhcCCCccCCCHHHHhh
Confidence            999999999999999874

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=4e-31  Score=284.21  Aligned_cols=191  Identities=32%  Similarity=0.465  Sum_probs=162.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------eEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------ELLL  421 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~l  421 (645)
                      +...+.||+|+||.||+|+.+.+|+.||||.++.  .....+...+|+++|++|+|+|||++++.-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            3445779999999999999999999999999887  3445667889999999999999999999866543      5789


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeec---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF----NARLES---  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d---  494 (645)
                      |||||.+|||+..|.+... ..-|+..+.+.+..+++.||.|||+   ++|+||||||.||++-...    .-|+.|   
T Consensus        95 vmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            9999999999999976433 3459999999999999999999998   9999999999999984322    234444   


Q ss_pred             --------cccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          495 --------SFTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       495 --------~~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                              .+...+||..|++||.... +.|+..+|.|||||++||.+||..||.....
T Consensus       171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence                    3455689999999999985 7889999999999999999999999976543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=6.2e-30  Score=293.75  Aligned_cols=134  Identities=26%  Similarity=0.361  Sum_probs=120.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...++||+|+||.||+|.+...+..||||++....    .....+..|+.++..++|+||+++++++...+..||||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57888999999999999999999889999999987532    23467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      ||+++++|.+++....    .+++...+.++.||+.||+|||+   .+|+||||||+||||+.++
T Consensus        84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g  141 (669)
T cd05610          84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEG  141 (669)
T ss_pred             eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCC
Confidence            9999999999997543    27889999999999999999999   8999999999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=2.3e-29  Score=251.51  Aligned_cols=225  Identities=29%  Similarity=0.369  Sum_probs=185.5

Q ss_pred             CceEEEEEEECCCCeEEEEEeccCCcc-h-hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhh
Q 041096          360 AFGNVYKAYFASSGSVAAVKRSKHSHE-G-KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ  437 (645)
Q Consensus       360 ~fg~Vy~g~~~~~~~~vavK~~~~~~~-~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  437 (645)
                      +||.||+|....++..+++|++..... . .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999988889999999876332 2 57899999999999999999999999999999999999999999999976


Q ss_pred             cCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------ccccccCCccc
Q 041096          438 DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------FTLTAGTMGYL  506 (645)
Q Consensus       438 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------~~~~~gt~~y~  506 (645)
                      ...    +++..++.++.++++++.|||+   .+++|+||+|+||+++.++..++.|.           .....++..|+
T Consensus        81 ~~~----~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
T smart00220       81 RGR----LSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM  153 (244)
T ss_pred             ccC----CCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence            443    8899999999999999999999   89999999999999999999998772           23345788999


Q ss_pred             CcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH--HHHHH
Q 041096          507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED--EMKRL  584 (645)
Q Consensus       507 APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~--~~~~l  584 (645)
                      +||.+....++.++||||||++++||++|..||......   ..+.+.             +...........  ....+
T Consensus       154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~---~~~~~~-------------~~~~~~~~~~~~~~~~~~~  217 (244)
T smart00220      154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL---LELFKK-------------IGKPKPPFPPPEWKISPEA  217 (244)
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHH-------------HhccCCCCccccccCCHHH
Confidence            999999888999999999999999999999998653211   111111             111111110111  45678


Q ss_pred             HHHHHHccCCCCCCCCCHHHHHH
Q 041096          585 LLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       585 ~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+++.+|+..+|++||++.++++
T Consensus       218 ~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      218 KDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHccCCchhccCHHHHhh
Confidence            88999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-30  Score=279.12  Aligned_cols=251  Identities=24%  Similarity=0.355  Sum_probs=210.0

Q ss_pred             ccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeee
Q 041096          337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAE  415 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~  415 (645)
                      ...++.+...+.-|++.+.||.|.+|.||+++...+++.+|+|++.......++...|.++++.+ .|||++.++|++..
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            34455556667788999999999999999999999999999999988777788899999999998 59999999999864


Q ss_pred             -----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          416 -----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       416 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                           ++++|||||||.+||..+.++...  +..+.|..+..|+..++.||++||.   +.++|||||-.||||+.++.+
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~V  162 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEV  162 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcE
Confidence                 468999999999999999998765  4569999999999999999999998   999999999999999999999


Q ss_pred             eeec------------cccccccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          491 RLES------------SFTLTAGTMGYLAPEYLQYG-----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       491 kl~d------------~~~~~~gt~~y~APE~~~~~-----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                      |+.|            ......||+.|||||++...     .|+.++|+||+|++..||.-|.+|+.......   .+. 
T Consensus       163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF-  238 (953)
T KOG0587|consen  163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALF-  238 (953)
T ss_pred             EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhc-
Confidence            9977            23345799999999999643     46889999999999999999999987653211   110 


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                               .+..  .|......+....+.+.+++..|+..|-++||++.++++
T Consensus       239 ---------~IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  239 ---------LIPR--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             ---------cCCC--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence                     0111  122222446778889999999999999999999988876

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2e-30  Score=254.65  Aligned_cols=230  Identities=26%  Similarity=0.341  Sum_probs=189.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..++||+|.||+|-+++-+.++..+|+|++++.    +.....-+.|-++|+..+||.+..|--.+...+++|.|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            36788899999999999999999999999999999873    34455667899999999999999998889999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec--------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES--------  494 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d--------  494 (645)
                      |||..+|.|.-+|.+.+.    ++.......-..|..||.|||+   ++||.||||.+|.|||.++..||.|        
T Consensus       247 MeyanGGeLf~HLsrer~----FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERV----FSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEccCceEeeehhhhhc----ccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc
Confidence            999999999999976543    7777777788899999999999   9999999999999999999999976        


Q ss_pred             ----cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          495 ----SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       495 ----~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                          .....+||+.|+|||++....|..+.|.|.+|||+|||++|+.||...+.+... .+             +-+-|-
T Consensus       320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLF-eL-------------Il~ed~  385 (516)
T KOG0690|consen  320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLF-EL-------------ILMEDL  385 (516)
T ss_pred             cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHH-HH-------------HHhhhc
Confidence                344568999999999999999999999999999999999999999875432211 11             111111


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPS  601 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  601 (645)
                          .++.........|....+..||.+|.-
T Consensus       386 ----kFPr~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  386 ----KFPRTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             ----cCCccCCHHHHHHHHHHhhcChHhhcC
Confidence                223333333444456678899999954

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.7e-30  Score=258.17  Aligned_cols=229  Identities=23%  Similarity=0.351  Sum_probs=189.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  421 (645)
                      ..+|....+||+|+||+|-++..+.+.+.+|||++++.    ..+.+--+.|-++|... +-|.++++..++..-+.+|.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            35688899999999999999999999999999998873    22233345666666665 46899999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-------
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-------  494 (645)
                      ||||+.+|+|--++++-.+    +....+.-.+..||-||-|||+   ++|+.||||.+|||||.++.+||.|       
T Consensus       428 VMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             EEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence            9999999999999987665    6777888899999999999999   9999999999999999999999977       


Q ss_pred             -----cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          495 -----SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       495 -----~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           .....+||+.|+|||++..++|...+|+|||||+||||+.|+.||++.++.+....+.                +
T Consensus       501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~----------------e  564 (683)
T KOG0696|consen  501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIM----------------E  564 (683)
T ss_pred             ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH----------------H
Confidence                 2234589999999999999999999999999999999999999999876543322222                2


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARP  600 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  600 (645)
                      ..  -.++.....+...+....+...|.+|.
T Consensus       565 hn--vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  565 HN--VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             cc--CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            21  245666666677777788888898884

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=2.3e-29  Score=246.18  Aligned_cols=258  Identities=19%  Similarity=0.266  Sum_probs=190.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAE-KGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~  418 (645)
                      ...|+....||+|.||.||++.-.+++.    .+|+|+++..+.   -.....+|+.+++.|+|+|++.|..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            3468888999999999999997655433    689998876422   24567899999999999999999999887 778


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC-CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC----CCeeee
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE-NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN----FNARLE  493 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~----~~~kl~  493 (645)
                      .+|++||.+. +|...++..+. ....++......|+.||+.|+.|||+   +=|+||||||.||||..+    +.+||+
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEee
Confidence            9999999955 88888875443 23458889999999999999999999   889999999999999888    899998


Q ss_pred             c---------------cccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccc-----cchhhHH
Q 041096          494 S---------------SFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEG-----HKMVNLV  552 (645)
Q Consensus       494 d---------------~~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~-----~~~~~l~  552 (645)
                      |               .....+.|..|+|||.+.+. -||.+.||||.||+..||++-.+.|......     ......+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl  258 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL  258 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence            8               23345679999999999875 5899999999999999999988887654321     1111222


Q ss_pred             HHHHhhhc---cC------------chhHHhhhhccCCCCH-H-------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          553 DWVWGLYA---EG------------RIIEAADKRLNGAFNE-D-------EMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       553 ~~~~~~~~---~~------------~~~~~~d~~l~~~~~~-~-------~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      +.+...+.   +.            ....-+.........- .       -....+.|...++..||.+|.|+++.++.
T Consensus       259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh  337 (438)
T KOG0666|consen  259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH  337 (438)
T ss_pred             HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence            22222211   11            0000000000001000 0       01125677789999999999999999874

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6.5e-30  Score=257.22  Aligned_cols=254  Identities=19%  Similarity=0.294  Sum_probs=198.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC--C----CeeeeeeeeeeCCeEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH--K----NLVQLLGWCAEKGELL  420 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H--~----niv~l~g~~~~~~~~~  420 (645)
                      +++|....++|+|.||.|-.+.+...+..||||+++.-....+..+-|++++++|.+  |    -+|.+.+|+.-.++.|
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            678999999999999999999999889999999999877777788899999999943  2    4888899999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-------------
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-------------  487 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-------------  487 (645)
                      ||+|.+ +-|+.++|..+..  .+++..++..|+.|++++++|||+   .+++|-||||+|||+-+.             
T Consensus       168 ivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~  241 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVC  241 (415)
T ss_pred             EEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccc
Confidence            999998 7799999987654  358889999999999999999999   999999999999997322             


Q ss_pred             -------CCeeeecc---------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          488 -------FNARLESS---------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       488 -------~~~kl~d~---------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                             ..+|+.|.         ....+.|..|+|||++.+-.++.++||||+||||.|+++|...|+..+..+.. .+
T Consensus       242 ~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL-aM  320 (415)
T KOG0671|consen  242 FIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL-AM  320 (415)
T ss_pred             eeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHH-HH
Confidence                   22334332         23346799999999999999999999999999999999999999876533321 23


Q ss_pred             HHHHHhhhc--------------cCch-----------hHHhhhh--c--cCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 041096          552 VDWVWGLYA--------------EGRI-----------IEAADKR--L--NGAFNEDEMKRLLLVGLSCANPDSSARPSM  602 (645)
Q Consensus       552 ~~~~~~~~~--------------~~~~-----------~~~~d~~--l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  602 (645)
                      ++.+.+-..              .+++           ....++.  +  .......+...+++|+..++..||.+|+|+
T Consensus       321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl  400 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL  400 (415)
T ss_pred             HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence            332222110              0000           0000000  0  011234567789999999999999999999


Q ss_pred             HHHHH
Q 041096          603 RRVFQ  607 (645)
Q Consensus       603 ~~vl~  607 (645)
                      +|+++
T Consensus       401 ~EAL~  405 (415)
T KOG0671|consen  401 REALS  405 (415)
T ss_pred             HHHhc
Confidence            99986

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=5.2e-31  Score=252.88  Aligned_cols=248  Identities=27%  Similarity=0.383  Sum_probs=191.2

Q ss_pred             cccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeee
Q 041096          336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGW  412 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~  412 (645)
                      ..|+-++|+.       ...||.|.||+|+|-.++.+|...|||+++..  ...+++++.|.+...+- +.||||+++|.
T Consensus        59 ~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa  131 (361)
T KOG1006|consen   59 HTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA  131 (361)
T ss_pred             cccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence            3455555544       45699999999999999999999999998873  34567888999876555 69999999999


Q ss_pred             eeeCCeEEEEEecCCCCCHhHHhhhc-CCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          413 CAEKGELLLVYEYMPNGSLDRMLYQD-SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       413 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      +..++..|+.||.| ..||+.+...- ..+...+++.-.-+|......||.||-+  +..|+|||+||+|||||..+.+|
T Consensus       132 ~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vK  208 (361)
T KOG1006|consen  132 LFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVK  208 (361)
T ss_pred             hhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEe
Confidence            99999999999999 56776654321 1122348888888899999999999998  48999999999999999999999


Q ss_pred             eecc-----------ccccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          492 LESS-----------FTLTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       492 l~d~-----------~~~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      +.|.           .+..+|-..|||||-+...  .|+.+|||||+|+.|+|++||+.||.+.+.      +.+.+...
T Consensus       209 LCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s------vfeql~~V  282 (361)
T KOG1006|consen  209 LCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS------VFEQLCQV  282 (361)
T ss_pred             eecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH------HHHHHHHH
Confidence            9882           2334688899999998643  489999999999999999999999987542      11111111


Q ss_pred             hccCchhHHhhhhccCCCCH---HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNE---DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~---~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...       |+... ..+.   +....+...+-.|+..|-..||+..++.+
T Consensus       283 v~g-------dpp~l-~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  283 VIG-------DPPIL-LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HcC-------CCCee-cCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            110       11110 1222   24556788888999999999999999876

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-29  Score=268.25  Aligned_cols=231  Identities=26%  Similarity=0.306  Sum_probs=187.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +..|.....+|.|+|+.|-++....++...++|++.+.   ..+-.+|+.++... +|+||+++.+.|.+..+.|+|||+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~  397 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL  397 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence            45666777799999999999999999999999998875   22344677665555 699999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE-cCCCCeeeecccc-------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML-DANFNARLESSFT-------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll-d~~~~~kl~d~~~-------  497 (645)
                      +.++-|.+.+.....    .. ..+..|+.+|+.++.|||+   ++++||||||+|||+ ++.+..++.+...       
T Consensus       398 l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  398 LDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             ccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            999888777765442    23 6777899999999999999   999999999999999 5888899977321       


Q ss_pred             --ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          498 --LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                        ..+-|..|.|||++....|++++|+||||++||||++|+.||.....+   ..+                ......+.
T Consensus       470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei----------------~~~i~~~~  530 (612)
T KOG0603|consen  470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEI----------------HTRIQMPK  530 (612)
T ss_pred             hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHH----------------HHhhcCCc
Confidence              235678899999999999999999999999999999999999865432   111                11111233


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +.........+|+.+|++.||.+||+|.++..
T Consensus       531 ~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  531 FSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            33445566777889999999999999999976

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=2.5e-28  Score=274.08  Aligned_cols=249  Identities=18%  Similarity=0.198  Sum_probs=162.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCC----CeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeee------eee
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASS----GSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW------CAE  415 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~------~~~  415 (645)
                      ..++|+..++||+|+||.||+|++..+    +..||+|++...... +.+..|  .+....+.++..++..      +..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~  206 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNE--RVRRACPNSCADFVYGFLEPVSSKK  206 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence            567899999999999999999999888    889999987653221 111111  1222222333222211      345


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCC----------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSEN----------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKA  479 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp  479 (645)
                      +.+.+|||||+++++|.+++......                ........+..++.|++.||+|||+   ++|+||||||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP  283 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKP  283 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCH
Confidence            67899999999999999998754210                0011233456799999999999999   9999999999


Q ss_pred             CcEEEcC-CCCeeeecccc-------------ccccCCcccCcccccCC----------------------CCCcchhHH
Q 041096          480 SNIMLDA-NFNARLESSFT-------------LTAGTMGYLAPEYLQYG----------------------TATEKTDVF  523 (645)
Q Consensus       480 ~NIlld~-~~~~kl~d~~~-------------~~~gt~~y~APE~~~~~----------------------~~t~ksDV~  523 (645)
                      +||||+. ++.+|+.|...             ...+++.|+|||.+...                      .++.++|||
T Consensus       284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw  363 (566)
T PLN03225        284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY  363 (566)
T ss_pred             HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence            9999986 57899987321             23578899999965321                      234567999


Q ss_pred             HHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC-chh---HHhhhhccCC------CCHHHHHHHHHHHHHccC
Q 041096          524 SYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG-RII---EAADKRLNGA------FNEDEMKRLLLVGLSCAN  593 (645)
Q Consensus       524 SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~-~~~---~~~d~~l~~~------~~~~~~~~l~~l~~~Cl~  593 (645)
                      ||||+||||+++..|+....     ..+..   .....+ ...   ....+....+      ..........+++..|++
T Consensus       364 SlGviL~el~~~~~~~~~~~-----~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~  435 (566)
T PLN03225        364 SAGLIFLQMAFPNLRSDSNL-----IQFNR---QLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR  435 (566)
T ss_pred             HHHHHHHHHHhCcCCCchHH-----HHHHH---HHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence            99999999999776643210     01100   000000 000   0011110000      000112235579999999


Q ss_pred             CCCCCCCCHHHHHHH
Q 041096          594 PDSSARPSMRRVFQI  608 (645)
Q Consensus       594 ~dP~~RPt~~~vl~~  608 (645)
                      .||++|||++++++.
T Consensus       436 ~dP~kR~ta~e~L~H  450 (566)
T PLN03225        436 FKGRQRISAKAALAH  450 (566)
T ss_pred             CCcccCCCHHHHhCC
Confidence            999999999999973

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=282.88  Aligned_cols=198  Identities=30%  Similarity=0.387  Sum_probs=177.4

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      -...+++....+|.+.++||+|+||.|..++++.++.+||+|++.+    ......-|.+|-.+|..-..+=|++|+-.|
T Consensus        65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF  144 (1317)
T KOG0612|consen   65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF  144 (1317)
T ss_pred             HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence            3456777778899999999999999999999999999999999887    234456789999999999999999999999


Q ss_pred             eeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       414 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                      .+.+++|+|||||+||+|-.++.+..    .++.......+..|..||.-||+   .|+|||||||+|||||..|..|+.
T Consensus       145 QD~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLA  217 (1317)
T KOG0612|consen  145 QDERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLA  217 (1317)
T ss_pred             cCccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeec
Confidence            99999999999999999999998765    28888888889999999999999   999999999999999999999998


Q ss_pred             cc-------------ccccccCCcccCccccc----C-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          494 SS-------------FTLTAGTMGYLAPEYLQ----Y-GTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       494 d~-------------~~~~~gt~~y~APE~~~----~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                      |.             ....+|||-|++||++.    + +.|...+|+||+||++|||+.|..||...
T Consensus       218 DFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  218 DFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD  284 (1317)
T ss_pred             cchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence            72             24468999999999985    2 57899999999999999999999999864

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=6.1e-29  Score=225.69  Aligned_cols=250  Identities=20%  Similarity=0.306  Sum_probs=187.9

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      |+..++||+|.||+||+|+..++.+.||+|+.+..+.   -....++|+-+++.++|+|||++++....++.+-||+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            4455789999999999999999999999998876332   2467899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------  494 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------------  494 (645)
                       ..+|..|...-...   ++......++.|+++||.|+|+   +.+.||||||+|.|++.++..|+.|            
T Consensus        84 -dqdlkkyfdslng~---~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvr  156 (292)
T KOG0662|consen   84 -DQDLKKYFDSLNGD---LDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR  156 (292)
T ss_pred             -hHHHHHHHHhcCCc---CCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence             56888888765443   8899999999999999999999   9999999999999999999999987            


Q ss_pred             cccccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccC---chhHHhh
Q 041096          495 SFTLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEG---RIIEAAD  569 (645)
Q Consensus       495 ~~~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~d  569 (645)
                      .++..+.|..|++|.++.+.+ |++..|+||-||++.|+.. |++.|.+.+..+.... +-|+.+...++   .+.+..|
T Consensus       157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkr-if~~lg~p~ed~wps~t~lpd  235 (292)
T KOG0662|consen  157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR-IFRLLGTPTEDQWPSMTKLPD  235 (292)
T ss_pred             eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHH-HHHHhCCCccccCCccccCCC
Confidence            234456789999999998765 7999999999999999998 5555655433222111 11222222222   1222223


Q ss_pred             hhccCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNE---------DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      -.....++.         ..-..=.++....+.-+|.+|.++++.++
T Consensus       236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            222222221         11111234444555668999999998876

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=6.5e-28  Score=264.49  Aligned_cols=251  Identities=16%  Similarity=0.251  Sum_probs=171.9

Q ss_pred             HhcCCCcCceeccCCceEEEEEEEC----------------CCCeEEEEEeccCCcch-h--------------HhHHHH
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFA----------------SSGSVAAVKRSKHSHEG-K--------------TEFLAE  394 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~----------------~~~~~vavK~~~~~~~~-~--------------~~~~~E  394 (645)
                      ..++|+..++||+|+||.||+|.+.                ..+..||||++....+. .              +.+..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            3678999999999999999999752                23467999998653221 2              234457


Q ss_pred             HHHHhhcCCCCe-----eeeeeeeee--------CCeEEEEEecCCCCCHhHHhhhcCC--------------------C
Q 041096          395 LSIIACLRHKNL-----VQLLGWCAE--------KGELLLVYEYMPNGSLDRMLYQDSE--------------------N  441 (645)
Q Consensus       395 i~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~~--------------------~  441 (645)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++++|.++|+....                    .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777888877654     678888754        3568999999999999999874321                    0


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------------ccccCCcccCc
Q 041096          442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------LTAGTMGYLAP  508 (645)
Q Consensus       442 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------------~~~gt~~y~AP  508 (645)
                      ...++|..+..++.|+++||.|||+   .+|+||||||+|||++.++..|+.|...             ...+++.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            1235788899999999999999998   8999999999999999999999987321             11247899999


Q ss_pred             ccccCCCC----------------------CcchhHHHHHHHHHHHHcCCC-CCCccccccchhhHHH---HHHhhhccC
Q 041096          509 EYLQYGTA----------------------TEKTDVFSYGVVVLEVACGRR-PIERETEGHKMVNLVD---WVWGLYAEG  562 (645)
Q Consensus       509 E~~~~~~~----------------------t~ksDV~SfGvvl~El~tG~~-P~~~~~~~~~~~~l~~---~~~~~~~~~  562 (645)
                      |.+.....                      ..+.||||+||+++||++|.. |+.............+   ..|......
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~  459 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ  459 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence            98754321                      234799999999999999875 6653211100000000   011111111


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDS---SARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPt~~~vl~  607 (645)
                      .        ..-...........+++..++..+|   .+|+|++|+++
T Consensus       460 ~--------~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        460 K--------YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             C--------CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            0        0000111223456666777777655   78999999985

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=241.27  Aligned_cols=238  Identities=24%  Similarity=0.334  Sum_probs=191.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..++||+|+|.+|-.+.+..+.+.+|+|++++    .+++......|-.+..+. +||.+|.|..++..+..++.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4679999999999999999999999999999998876    344455566677666665 69999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-------
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-------  494 (645)
                      |.||+++|+|--++++.++    |+...+......|+.||.|||+   ++|+.||||.+|||||.++..|+.|       
T Consensus       329 vieyv~ggdlmfhmqrqrk----lpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEecCcceeeehhhhhc----CcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC
Confidence            9999999999988877665    8999998899999999999999   9999999999999999999999855       


Q ss_pred             -----cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          495 -----SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       495 -----~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           ..+..+||+.|+|||++.+..|.-..|+|++||+++||..|+.||+-........+--++.....        +.
T Consensus       402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi--------le  473 (593)
T KOG0695|consen  402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI--------LE  473 (593)
T ss_pred             CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH--------hh
Confidence                 45567999999999999999999999999999999999999999976432222222222222211        11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPS  601 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  601 (645)
                      +.+  ..+.........+.+.-++.||.+|..
T Consensus       474 kqi--riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  474 KQI--RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             hcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence            222  123333344555667788999998843

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.95  E-value=1.8e-28  Score=239.02  Aligned_cols=236  Identities=21%  Similarity=0.283  Sum_probs=187.1

Q ss_pred             HhcCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeee----CCeE
Q 041096          346 ATRGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAE----KGEL  419 (645)
Q Consensus       346 ~~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~----~~~~  419 (645)
                      .|++|.+. ++||-|-.|+|-.+..+.+++.+|+|++..+.    ...+|+++.-.. .|+|||.+++++.+    ...+
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            34555544 57999999999999999999999999987643    455788775444 69999999998865    3568


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeec--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLES--  494 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d--  494 (645)
                      ++|||.|+||.|...+.++..  ..++..+.-.|+.||+.|+.|||+   .+|.||||||+|+|-..   |-..|+.|  
T Consensus       135 LiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             EeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccc
Confidence            899999999999999987664  358999999999999999999999   99999999999999853   33446655  


Q ss_pred             ---------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          495 ---------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       495 ---------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                               .....+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||.........                 
T Consensus       210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais-----------------  272 (400)
T KOG0604|consen  210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------------  272 (400)
T ss_pred             cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC-----------------
Confidence                     223456799999999999999999999999999999999999999875432111                 


Q ss_pred             HHhhhhcc---CCCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLN---GAFNED----EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~---~~~~~~----~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .-+..+++   -+++.+    ..+...++++..++.+|.+|.|+.+++.
T Consensus       273 pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  273 PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            11111111   133433    3456677888999999999999999986

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=1e-28  Score=269.11  Aligned_cols=232  Identities=25%  Similarity=0.384  Sum_probs=176.5

Q ss_pred             CCcCceeccCCceE-EEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          350 FHSNRILGRGAFGN-VYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       350 f~~~~~lG~G~fg~-Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      |...+++|.|+.|+ ||+|...  ++.||||++....  ..-..+|+..|+.- +|||||++++.-.+++..||..|.| 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            55667899999986 7999997  7899999886533  23456899998887 5999999999999999999999999 


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---C--CCeeeec--------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---N--FNARLES--------  494 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~--~~~kl~d--------  494 (645)
                      ..+|.+++...........-...+.+..|+++||++||+   .+||||||||+||||+.   +  ..++|+|        
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            679999998742111111114456788999999999999   99999999999999976   2  4677766        


Q ss_pred             -------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          495 -------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       495 -------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                             ......||-||+|||.+...+-+.++||||+|||+|..++ |..||......+  .+++....      .+. 
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~------~L~-  733 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNY------TLV-  733 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCcc------cee-
Confidence                   2233569999999999999999999999999999999999 589998643211  11111000      000 


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF  606 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl  606 (645)
                          .|  ....++  ...+|+..|++++|..||++.+|+
T Consensus       734 ----~L--~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  734 ----HL--EPLPDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ----ee--ccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                00  111122  667888999999999999999995

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=7e-28  Score=254.00  Aligned_cols=212  Identities=26%  Similarity=0.383  Sum_probs=181.5

Q ss_pred             cCHHHHHHHhc---CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeee
Q 041096          338 FSYRELRSATR---GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLL  410 (645)
Q Consensus       338 ~~~~~l~~~~~---~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~  410 (645)
                      -.|-.|+.+.-   -|...+.||-|+||.|.++.-.++...+|+|.+.+.    +......++|-+||.....+=||+|+
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence            34444555442   366778899999999999999888899999998873    33455678899999999999999999


Q ss_pred             eeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       411 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      -.|.+++.+|+||||++||++-.+|-+...    +.+..+...+..+..|+++.|.   .|+|||||||+|||||.++..
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmgI----FeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHI  768 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMGI----FEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHI  768 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHHHhcc----CHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCce
Confidence            999999999999999999999999987654    7777777788899999999999   999999999999999999999


Q ss_pred             eeecc------------------------------------------------------ccccccCCcccCcccccCCCC
Q 041096          491 RLESS------------------------------------------------------FTLTAGTMGYLAPEYLQYGTA  516 (645)
Q Consensus       491 kl~d~------------------------------------------------------~~~~~gt~~y~APE~~~~~~~  516 (645)
                      |+.|.                                                      -...+||..|+|||++....+
T Consensus       769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~  848 (1034)
T KOG0608|consen  769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY  848 (1034)
T ss_pred             eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence            99660                                                      011369999999999999999


Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       517 t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                      +.-+|+||.|||||||+.|+.||-.....+....+++|..
T Consensus       849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~  888 (1034)
T KOG0608|consen  849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRN  888 (1034)
T ss_pred             cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhh
Confidence            9999999999999999999999988777766667777753

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.4e-27  Score=240.57  Aligned_cols=145  Identities=26%  Similarity=0.398  Sum_probs=124.1

Q ss_pred             CCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-----C---CC
Q 041096          334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-----H---KN  405 (645)
Q Consensus       334 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-----H---~n  405 (645)
                      |.+.....|... .++|...++||-|.|++||++.+..+.+.||+|+.+......+..+.||++|++++     |   ..
T Consensus        65 GYHpV~IGD~F~-~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~  143 (590)
T KOG1290|consen   65 GYHPVRIGDVFN-GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKC  143 (590)
T ss_pred             CCceeecccccc-CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence            344444444432 36788999999999999999999999999999999988888888999999999984     2   47


Q ss_pred             eeeeeeeeee----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          406 LVQLLGWCAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       406 iv~l~g~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      ||+|+++|..    +.++|||+|++ |-+|..++......+  ++.....+|++||+.||.|||.+  .+|||.||||+|
T Consensus       144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPEN  218 (590)
T KOG1290|consen  144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPEN  218 (590)
T ss_pred             eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcce
Confidence            9999999875    45899999999 889999998765444  88999999999999999999995  699999999999


Q ss_pred             EEE
Q 041096          482 IML  484 (645)
Q Consensus       482 Ill  484 (645)
                      |||
T Consensus       219 vLl  221 (590)
T KOG1290|consen  219 VLL  221 (590)
T ss_pred             eee
Confidence            998

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=3.8e-28  Score=225.39  Aligned_cols=187  Identities=32%  Similarity=0.436  Sum_probs=162.5

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhh-cCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIAC-LRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      ...||+|++|.|-+-++..+|...|+|++..  ..+.++..+.|+.+..+ ..+|.+|.++|...+....++.||.| ..
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~t  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DT  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hh
Confidence            4569999999999999999999999999876  45566778889988555 47999999999999999999999999 56


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------cc
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------TL  498 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------~~  498 (645)
                      ||+.+..+--..+..+++.-+-+|+..|.+||.|||+  ...++|||+||+|||+|.++.+|+.|..           +.
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~  207 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM  207 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH
Confidence            8888876655556678999999999999999999999  4889999999999999999999998832           33


Q ss_pred             cccCCcccCcccccC----CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          499 TAGTMGYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       499 ~~gt~~y~APE~~~~----~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                      ..|-..|||||.+..    ..|+-||||||+|+.+.||++++.||+..
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            467889999998864    36899999999999999999999999864

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=7e-29  Score=236.38  Aligned_cols=250  Identities=23%  Similarity=0.377  Sum_probs=187.8

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccC--Ccc-hhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--------Ce
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHE-GKTEFLAELSIIACLRHKNLVQLLGWCAEK--------GE  418 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------~~  418 (645)
                      |....+||+|.||.||++..++++..||+|+.-.  .++ -....++|+++|..|+|+|++.++..|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            3344679999999999999999999999886543  222 245678999999999999999999998653        35


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---  495 (645)
                      +|||+++|+. +|...|.....   .++..++.+++.++..||.|+|.   ..|+|||+||.|+||+.++..|+.|.   
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~v---r~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGla  171 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRKV---RFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLA  171 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCccc---cccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccc
Confidence            8999999954 88888876533   38899999999999999999999   99999999999999999999999872   


Q ss_pred             -------------ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH-------
Q 041096          496 -------------FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW-------  554 (645)
Q Consensus       496 -------------~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~-------  554 (645)
                                   .+..+.|..|++||.+.+ +.|+++.|||.-||++.||+++.+-+.+..+... ..++..       
T Consensus       172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq-l~~Is~LcGs~tk  250 (376)
T KOG0669|consen  172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ-LHLISQLCGSITK  250 (376)
T ss_pred             cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH-HHHHHHHhccCCc
Confidence                         233455899999999876 5689999999999999999999988887654322 222222       


Q ss_pred             -HHhhhccCchhHHh--hhhccCCCC--HHHHH------HHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          555 -VWGLYAEGRIIEAA--DKRLNGAFN--EDEMK------RLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       555 -~~~~~~~~~~~~~~--d~~l~~~~~--~~~~~------~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       +|....+-.+.+.+  .|.-.+.+.  ++..+      ..++++..++..||.+|+.+.+++.
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence             22222222222222  111111110  11111      4567778889999999999999875

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.2e-28  Score=248.59  Aligned_cols=238  Identities=25%  Similarity=0.367  Sum_probs=181.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch--------hHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--------KTEFLAELSIIACLRHKNLVQLLGWCAE-KGEL  419 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~--------~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~  419 (645)
                      +|-..++||+|||+.||++.+-...+.||||+-...+.+        .+...+|.++.+.|.||.||++++|+.- .+.+
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            466678899999999999999888899999986543322        2346789999999999999999999875 4678


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC---CCeeeec--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN---FNARLES--  494 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~---~~~kl~d--  494 (645)
                      |-|+|||++.+|+-||+.+..    ++...+..|++||..||.||.+ ..++|||-||||.||||-..   +..||.|  
T Consensus       544 CTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             eeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            999999999999999987654    8999999999999999999986 56899999999999999543   4456644  


Q ss_pred             -----------------cccccccCCcccCcccccC----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          495 -----------------SFTLTAGTMGYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       495 -----------------~~~~~~gt~~y~APE~~~~----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                                       ......||.+|++||++.-    .+.+.|+||||.||++|..+.|+.||...-..   ..++.
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---QdILq  695 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---QDILQ  695 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH---HHHHh
Confidence                             1233579999999998853    45799999999999999999999999764221   12221


Q ss_pred             HHHhhhccCchhHHhhhhccCCCC--HHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFN--EDEMKRLLLVGLSCANPDSSARPSMRRV  605 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~--~~~~~~l~~l~~~Cl~~dP~~RPt~~~v  605 (645)
                             ...+..+-.-    .++  +........++..|+...-++|....++
T Consensus       696 -------eNTIlkAtEV----qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL  738 (775)
T KOG1151|consen  696 -------ENTILKATEV----QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL  738 (775)
T ss_pred             -------hhchhcceec----cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence                   1111111111    111  1123345567789999988888765544

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=252.85  Aligned_cols=236  Identities=21%  Similarity=0.253  Sum_probs=194.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +++....||-||||.|=++..+......|+|++++    .....+....|-.+|...+.|.||+|+-.+.+.+..|++||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            44455679999999999999876555688898876    23445678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec----------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----------  494 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d----------  494 (645)
                      -|-+|.|...|.++..    ++......++.++.+|++|||+   ++||.|||||+|.|||.++-+|+-|          
T Consensus       501 aClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             hhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            9999999999987654    7778888899999999999999   9999999999999999999999976          


Q ss_pred             -cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          495 -SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       495 -~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                       .....+||+.|.|||++.....+.++|.||+|++++||++|++||...++-..+..++..             +|.   
T Consensus       574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-------------id~---  637 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-------------IDK---  637 (732)
T ss_pred             CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-------------hhh---
Confidence             345579999999999999999999999999999999999999999886542222111111             111   


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      -.++....+...++++..++.+|.+|.-     ..++-+
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK  676 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence            1345555666777888888999999977     556544

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=4.2e-26  Score=221.92  Aligned_cols=198  Identities=35%  Similarity=0.517  Sum_probs=176.3

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhH
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDR  433 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~  433 (645)
                      ||+|.+|.||++....++..+++|++.....  ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999988889999999887544  35789999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeecc------------ccccc
Q 041096          434 MLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESS------------FTLTA  500 (645)
Q Consensus       434 ~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~------------~~~~~  500 (645)
                      ++....   ..+++..+..++.++++++++||+   .+++|+||+|.||+++. +...++.|.            .....
T Consensus        81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~  154 (215)
T cd00180          81 LLKENE---GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV  154 (215)
T ss_pred             HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence            997653   238999999999999999999999   89999999999999999 888888772            22244


Q ss_pred             cCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHH
Q 041096          501 GTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED  579 (645)
Q Consensus       501 gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  579 (645)
                      +...|++||..... ..+.++|+|++|++++||                                               
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------  187 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------  187 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence            77889999999877 889999999999999999                                               


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          580 EMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       580 ~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        ..+.+++..|++.+|.+||+++++++.
T Consensus       188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 --PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence              457788899999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.94  E-value=1.8e-27  Score=246.43  Aligned_cols=184  Identities=26%  Similarity=0.415  Sum_probs=159.6

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      .++||+|.||+||-|+++.+|+.||||.+.+   .........+|+.+|+++.||.||.|...|+..+..++|||-+ +|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence            4789999999999999999999999998876   4455678999999999999999999999999999999999999 56


Q ss_pred             CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeec-----------c
Q 041096          430 SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLES-----------S  495 (645)
Q Consensus       430 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d-----------~  495 (645)
                      +..+.+....+  ..|+......++.||+.||.|||.   ++|+|+||||+||||.+..   .+|+.|           .
T Consensus       648 DMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  648 DMLEMILSSEK--GRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             hHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence            66555543332  238888888999999999999999   9999999999999996542   345555           2


Q ss_pred             ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          496 FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       496 ~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                      ....+||+.|+|||++....|+..-|+||.||++|--++|.-||...
T Consensus       723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd  769 (888)
T KOG4236|consen  723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED  769 (888)
T ss_pred             hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence            34568999999999999999999999999999999999999999764

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-26  Score=243.17  Aligned_cols=186  Identities=23%  Similarity=0.341  Sum_probs=164.2

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhH---------hHHHHHHHHhhcC---CCCeeeeeeeeeeC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---------EFLAELSIIACLR---HKNLVQLLGWCAEK  416 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~---------~~~~Ei~~l~~l~---H~niv~l~g~~~~~  416 (645)
                      .|...+.+|+|+||.|+.|.++.+...|+||.+.+.+--..         ..-.||.+|..|+   |+||++++++|+++
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            57788899999999999999999999999998876432221         2456999999997   99999999999999


Q ss_pred             CeEEEEEecC-CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-
Q 041096          417 GELLLVYEYM-PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-  494 (645)
Q Consensus       417 ~~~~lV~Ey~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-  494 (645)
                      +.+||+||-. ++.+|.+++..+..    ++.....-|++||+.|+++||+   ++|+|||||-+||.||.++.+|+.| 
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp~----m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidf  714 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKPR----MDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDF  714 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccCc----cchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeec
Confidence            9999999986 56689999976554    8999999999999999999999   9999999999999999999999987 


Q ss_pred             ---------cccccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 041096          495 ---------SFTLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIER  541 (645)
Q Consensus       495 ---------~~~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~  541 (645)
                               .+...+||..|.|||++.+.+| ...-|||++|++||-++....||..
T Consensus       715 gsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  715 GSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             cchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence                     3455689999999999999988 5668999999999999999999864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=7.7e-25  Score=216.74  Aligned_cols=186  Identities=34%  Similarity=0.485  Sum_probs=164.4

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      |+..+.||+|++|.||++....++..+++|.......  ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4567889999999999999988789999999876433  46789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +++|.+++......   +++.....++.+++.++.|||+   .+++|+||+|+||+++.++..++.|..           
T Consensus        81 ~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~  154 (225)
T smart00221       81 GGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA  154 (225)
T ss_pred             CCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence            99999999765432   7899999999999999999999   899999999999999999999887621           


Q ss_pred             --cccccCCcccCcccc-cCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 041096          497 --TLTAGTMGYLAPEYL-QYGTATEKTDVFSYGVVVLEVACGRRPIER  541 (645)
Q Consensus       497 --~~~~gt~~y~APE~~-~~~~~t~ksDV~SfGvvl~El~tG~~P~~~  541 (645)
                        ....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence              223567789999998 667788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.92  E-value=1.5e-25  Score=210.98  Aligned_cols=249  Identities=19%  Similarity=0.306  Sum_probs=185.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeC--CeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEK--GELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~--~~~~lV~  423 (645)
                      .++|+..+++|+|.++.||.|....+++.++||+++..+  .+.+.+|+.+|..|+ ||||++|++...+.  ....||+
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            357888899999999999999988888999999987633  457889999999997 99999999998765  4678999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-eeeec--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-ARLES--------  494 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-~kl~d--------  494 (645)
                      ||+.+.+.......       |+-.++...+.++++||.|+|+   .||.|||+||.|+|+|.... .++.|        
T Consensus       115 E~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH  184 (338)
T KOG0668|consen  115 EYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH  184 (338)
T ss_pred             hhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence            99998887766532       7778888999999999999999   99999999999999996543 45544        


Q ss_pred             ---cccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh-----------
Q 041096          495 ---SFTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY-----------  559 (645)
Q Consensus       495 ---~~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~-----------  559 (645)
                         .....+.+..|.-||.+.. +.|+..-|+|||||+|.+|+..+.||....+......-+..+.+.-           
T Consensus       185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i  264 (338)
T KOG0668|consen  185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI  264 (338)
T ss_pred             CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence               3445567888999998865 6789999999999999999999999975443322111111111110           


Q ss_pred             -ccCchhHHhhhhccCCC-----CH--H-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 -AEGRIIEAADKRLNGAF-----NE--D-EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 -~~~~~~~~~d~~l~~~~-----~~--~-~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       -+.+..+++....+..+     +.  . .....++++...+..|-++|||++|.+.
T Consensus       265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence             01111122211111111     00  1 1245677778889999999999999875

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.8e-26  Score=220.76  Aligned_cols=252  Identities=23%  Similarity=0.298  Sum_probs=184.4

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----CeEEEE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GELLLV  422 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV  422 (645)
                      +..+-||.|+||.||..++..+|+.||+|++..-   -...+.+.+|+++|...+|.|++..++...-.     +++|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3457799999999999999999999999988763   23457788999999999999999998876543     257889


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-------  495 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-------  495 (645)
                      +|.| ..+|..++-...    .|+-....-+..||++||.|||+   .+|.||||||.|.|++++...||.|.       
T Consensus       136 TELm-QSDLHKIIVSPQ----~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee  207 (449)
T KOG0664|consen  136 TELM-QSDLHKIIVSPQ----ALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWD  207 (449)
T ss_pred             HHHH-HhhhhheeccCC----CCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccc
Confidence            9988 557877775433    38888888899999999999999   99999999999999999999999872       


Q ss_pred             ------ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc--------
Q 041096          496 ------FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA--------  560 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~--------  560 (645)
                            .+..+.|.+|+|||.+.+ +.|+.+.||||.||++.||+..+..|.....-+.. .++....+...        
T Consensus       208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL-~lItdLLGTPs~EaMr~AC  286 (449)
T KOG0664|consen  208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQL-QMIIDLLGTPSQEAMKYAC  286 (449)
T ss_pred             hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHH-HHHHHHhCCCcHHHHHHHh
Confidence                  334567889999999987 56899999999999999999888888654322111 11111111111        


Q ss_pred             cCchhHHhhhhccCC--------CC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          561 EGRIIEAADKRLNGA--------FN-EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~--------~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      +|....++....+..        .+ .+.-.....+...++..||.+|.+..+.+..+..
T Consensus       287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            111111111111100        01 1111223345567899999999999998887643

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.91  E-value=1.1e-24  Score=214.91  Aligned_cols=252  Identities=21%  Similarity=0.245  Sum_probs=186.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------Ce
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------GE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~  418 (645)
                      .+|...+.+|.|.- .|.-+.+.-.+++||+|+....   ....+...+|..++..++|+|+++++.++.-.      .+
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            45556677888887 7777877777899999987653   33445678999999999999999999988644      36


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec----
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----  494 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d----  494 (645)
                      .|+||||| ..+|...+...      ++-.....|..|++.|++|||+   .+|+||||||+||++..+...|+.|    
T Consensus        96 ~y~v~e~m-~~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   96 VYLVMELM-DANLCQVILME------LDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             HHHHHHhh-hhHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhh
Confidence            89999999 67999888732      6677888999999999999999   9999999999999999999999976    


Q ss_pred             -------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh---------------hHH
Q 041096          495 -------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV---------------NLV  552 (645)
Q Consensus       495 -------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~---------------~l~  552 (645)
                             ..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+..|.+.+.-+...               .+.
T Consensus       166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence                   2234567889999999999889999999999999999999999887543211111               111


Q ss_pred             HHHHhhhccCc------hhHHhhhh-ccC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHc
Q 041096          553 DWVWGLYAEGR------IIEAADKR-LNG--AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILN  610 (645)
Q Consensus       553 ~~~~~~~~~~~------~~~~~d~~-l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~  610 (645)
                      ..+........      ..+.+... ...  +.+.-.......++..|+-.+|++|-+.+++++  +++
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            11111111000      00000000 000  011122345667778999999999999999998  454

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.91  E-value=5e-25  Score=228.38  Aligned_cols=273  Identities=20%  Similarity=0.200  Sum_probs=210.5

Q ss_pred             cccCCCCCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-----
Q 041096          328 RADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-----  402 (645)
Q Consensus       328 ~~~~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-----  402 (645)
                      .|+...|.....+.|+.  -.+|.+....|+|-|++|.+|.+...+..||||++.....-.+.=+.|+++|.+|+     
T Consensus       414 NWdDaEGYYrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~E  491 (752)
T KOG0670|consen  414 NWDDAEGYYRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPE  491 (752)
T ss_pred             CcccccceEEEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCch
Confidence            34455566666666653  46788888899999999999999888899999999987776777789999999996     


Q ss_pred             -CCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          403 -HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       403 -H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                       .-|+++|+-.|...+++|||+|-+ ..+|.+.|++... ..-|........+.|+.-||..|-.   .+|+|.||||.|
T Consensus       492 dk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDN  566 (752)
T KOG0670|consen  492 DKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDN  566 (752)
T ss_pred             hhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccc
Confidence             358999999999999999999988 6799999987654 3347888889999999999999998   899999999999


Q ss_pred             EEEcCCCC-eeeeccccc----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhh
Q 041096          482 IMLDANFN-ARLESSFTL----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN  550 (645)
Q Consensus       482 Illd~~~~-~kl~d~~~~----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~  550 (645)
                      |||++.-+ .||+|....          ...+.-|.|||++.+-.|+...|+||.||.||||.||+..|.+....++...
T Consensus       567 iLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl  646 (752)
T KOG0670|consen  567 ILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL  646 (752)
T ss_pred             eEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHH
Confidence            99997654 577774332          2234569999999999999999999999999999999999998776555443


Q ss_pred             HHHHHHhh----hccCc---------------------------hhHHhhh------hccC--CCCHH---HHHHHHHHH
Q 041096          551 LVDWVWGL----YAEGR---------------------------IIEAADK------RLNG--AFNED---EMKRLLLVG  588 (645)
Q Consensus       551 l~~~~~~~----~~~~~---------------------------~~~~~d~------~l~~--~~~~~---~~~~l~~l~  588 (645)
                      .++.....    +..+.                           ++..+.|      .|.+  .++.+   ....+..|.
T Consensus       647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL  726 (752)
T KOG0670|consen  647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL  726 (752)
T ss_pred             HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence            33321111    11110                           0111111      1111  13333   455677888


Q ss_pred             HHccCCCCCCCCCHHHHHH
Q 041096          589 LSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       589 ~~Cl~~dP~~RPt~~~vl~  607 (645)
                      -.|+..||++|.|..+.++
T Consensus       727 dkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  727 DKMLILDPEKRITVNQALK  745 (752)
T ss_pred             HHHhccChhhcCCHHHHhc
Confidence            9999999999999999875

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=1.4e-25  Score=238.95  Aligned_cols=241  Identities=24%  Similarity=0.317  Sum_probs=194.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..+|....++|.|.+|.|||+++..+++..|+|.++. ...+.+-...|+-+++..+|+|||.++|.+...+.+++.|||
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            4578888999999999999999999999999999887 455566778899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      |.+|+|.+..+...    +++..++...++...+||+|||+   .+-+|||||-.|||+++.+.+|+.|+.         
T Consensus        94 cgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati  166 (829)
T KOG0576|consen   94 CGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI  166 (829)
T ss_pred             cCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhh
Confidence            99999999887544    38999999999999999999999   999999999999999999999997722         


Q ss_pred             ---cccccCCcccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ---TLTAGTMGYLAPEYL---QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~---~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                         ....||++|||||+.   ..+.|.+++|||+.|+...|+..-+.|......   +..+.--....+.        -+
T Consensus       167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp---mr~l~LmTkS~~q--------pp  235 (829)
T KOG0576|consen  167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP---MRALFLMTKSGFQ--------PP  235 (829)
T ss_pred             hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch---HHHHHHhhccCCC--------CC
Confidence               234699999999976   356799999999999999999888877544221   1111000000000        01


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .++  -.....+.+-++++.|+..+|++||+++.+++
T Consensus       236 ~lk--Dk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  236 TLK--DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccc--CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            111  12234567788899999999999999877654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=9.2e-25  Score=256.71  Aligned_cols=182  Identities=17%  Similarity=0.240  Sum_probs=133.3

Q ss_pred             hcCC-CCeeeeeeee-------eeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 041096          400 CLRH-KNLVQLLGWC-------AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ  471 (645)
Q Consensus       400 ~l~H-~niv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  471 (645)
                      .++| +||++++++|       .+.+.+++++||+ .++|.++|....   ..+++.+++.++.||++||+|||+   ++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~g  100 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHS---QG  100 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            4556 6888899887       2334678889988 669999997532   238999999999999999999998   99


Q ss_pred             eeeCCCCCCcEEEcCCC-------------------Ceeeeccc----------------------------cccccCCc
Q 041096          472 VIHRDIKASNIMLDANF-------------------NARLESSF----------------------------TLTAGTMG  504 (645)
Q Consensus       472 ivHrDlkp~NIlld~~~-------------------~~kl~d~~----------------------------~~~~gt~~  504 (645)
                      |+||||||+||||+..+                   ..|+.|..                            ....||+.
T Consensus       101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (793)
T PLN00181        101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW  180 (793)
T ss_pred             eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence            99999999999996433                   34443311                            01247888


Q ss_pred             ccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHH
Q 041096          505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRL  584 (645)
Q Consensus       505 y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  584 (645)
                      |||||++.+..++.++|||||||+||||++|..|+.....     .+.....         ....+..     .......
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~~~~~---------~~~~~~~-----~~~~~~~  241 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMSSLRH---------RVLPPQI-----LLNWPKE  241 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHHHHHH---------hhcChhh-----hhcCHHH
Confidence            9999999999999999999999999999998887643110     0000000         0001100     1112334


Q ss_pred             HHHHHHccCCCCCCCCCHHHHHH
Q 041096          585 LLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       585 ~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..++.+||+++|.+||+|.|+++
T Consensus       242 ~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        242 ASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHhCCCChhhCcChHHHhh
Confidence            57778999999999999999986

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.91  E-value=6.6e-25  Score=211.26  Aligned_cols=238  Identities=19%  Similarity=0.346  Sum_probs=190.8

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .+|.+...|..|+|+++.  ..+++|++.-   .....++|.+|.-.|+-..||||+.++|.|.....+.++..||+.||
T Consensus       196 tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            458888999999999974  4455666543   33345689999999999999999999999999999999999999999


Q ss_pred             HhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---cc----ccccCC
Q 041096          431 LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---FT----LTAGTM  503 (645)
Q Consensus       431 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---~~----~~~gt~  503 (645)
                      |+..|+...  +...+-.+..+++.++|+||+|||+. ++-|.---|.+..+++|++.+++|+-.   ++    ...-.+
T Consensus       274 lynvlhe~t--~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~p  350 (448)
T KOG0195|consen  274 LYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSP  350 (448)
T ss_pred             HHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccccCc
Confidence            999998754  34577789999999999999999984 233334468999999999999999641   11    123367


Q ss_pred             cccCcccccCCCC---CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHH
Q 041096          504 GYLAPEYLQYGTA---TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE  580 (645)
Q Consensus       504 ~y~APE~~~~~~~---t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  580 (645)
                      .||+||.++..+.   -.++|+|||+++||||.|...||.....-+.                -.++.-+.|+...++..
T Consensus       351 awmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----------------gmkialeglrv~ippgi  414 (448)
T KOG0195|consen  351 AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----------------GMKIALEGLRVHIPPGI  414 (448)
T ss_pred             ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----------------hhhhhhccccccCCCCc
Confidence            8999999987554   3579999999999999999999976543211                12334456666778888


Q ss_pred             HHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          581 MKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...+.+++.-|.+.||.+||.+..++-+|++.
T Consensus       415 s~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  415 SRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             cHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            88999999999999999999999999988864

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.90  E-value=4.1e-24  Score=218.34  Aligned_cols=254  Identities=22%  Similarity=0.308  Sum_probs=186.7

Q ss_pred             HHHHhcCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCe
Q 041096          343 LRSATRGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGE  418 (645)
Q Consensus       343 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~  418 (645)
                      +....+.|...++||+|.|++||++++..   ....||+|.+.... ......+|+++|..+. +.||+++.+++...+.
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            44455678899999999999999999877   67899999886632 2345889999999995 9999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee-e-----
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-L-----  492 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k-l-----  492 (645)
                      ..+|+||++.....+++..       ++..++...+..+..||+++|+   ++|+||||||+|+|-+.....- +     
T Consensus       110 v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             eEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechh
Confidence            9999999999999998864       7788899999999999999999   9999999999999853211100 0     


Q ss_pred             -------------------------ec--------------------------cccccccCCcccCcccccC-CCCCcch
Q 041096          493 -------------------------ES--------------------------SFTLTAGTMGYLAPEYLQY-GTATEKT  520 (645)
Q Consensus       493 -------------------------~d--------------------------~~~~~~gt~~y~APE~~~~-~~~t~ks  520 (645)
                                               +.                          ..-...||+||.|||++.. +..++++
T Consensus       180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai  259 (418)
T KOG1167|consen  180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI  259 (418)
T ss_pred             HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence                                     00                          0112469999999999875 5679999


Q ss_pred             hHHHHHHHHHHHHcCCCCCCccccccc-hhhHHHHH-----Hh-hhccCc-----------hhHHh------h-hhccC-
Q 041096          521 DVFSYGVVVLEVACGRRPIERETEGHK-MVNLVDWV-----WG-LYAEGR-----------IIEAA------D-KRLNG-  574 (645)
Q Consensus       521 DV~SfGvvl~El~tG~~P~~~~~~~~~-~~~l~~~~-----~~-~~~~~~-----------~~~~~------d-~~l~~-  574 (645)
                      ||||-|||++-+++++.||......-. ...++...     .. ....+.           +.+..      + ..+.. 
T Consensus       260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~  339 (418)
T KOG1167|consen  260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS  339 (418)
T ss_pred             ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence            999999999999999999976543211 11111100     00 000011           00000      0 00000 


Q ss_pred             --------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 --------AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 --------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                              ......+..++++..+|+..||.+|-|+++.++
T Consensus       340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence                    011112347889999999999999999999986

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.89  E-value=7.8e-23  Score=195.64  Aligned_cols=161  Identities=23%  Similarity=0.184  Sum_probs=118.1

Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-----cccccccCC
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----SFTLTAGTM  503 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-----~~~~~~gt~  503 (645)
                      |+|.+++.....   .++|.+++.++.|+++||+|||+   .+      ||+|||++.++..++-.     ......||+
T Consensus         1 GsL~~~l~~~~~---~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~   68 (176)
T smart00750        1 VSLADILEVRGR---PLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDP   68 (176)
T ss_pred             CcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceeeccceEeeccccCCCcc
Confidence            789999976432   39999999999999999999998   44      99999999998888711     112236899


Q ss_pred             cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHH-
Q 041096          504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMK-  582 (645)
Q Consensus       504 ~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~-  582 (645)
                      .|||||++.+..++.++|||||||++|||++|+.||........  .+..........       ++.- ......... 
T Consensus        69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~-------~~~~-~~~~~~~~~~  138 (176)
T smart00750       69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA--ILEILLNGMPAD-------DPRD-RSNLESVSAA  138 (176)
T ss_pred             cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH--HHHHHHHHhccC-------Cccc-cccHHHHHhh
Confidence            99999999999999999999999999999999999965322111  111111110000       0000 011122222 


Q ss_pred             -HHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          583 -RLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       583 -~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                       .+.+++..||+.+|.+||++.++++.+..
T Consensus       139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      139 RSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             hhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence             58999999999999999999999998753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.89  E-value=8.6e-22  Score=195.17  Aligned_cols=190  Identities=28%  Similarity=0.290  Sum_probs=136.6

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|+|.+.++.|+||++   ..++.|++||+.|+++        ++|+|+|+|+|.+.. ..+||||||+++|..
T Consensus        19 ~~~w~~~G~a~~~~~~i~LT~~---~~~~~G~~~~~~pi~~--------~~F~~~f~F~i~~~~-~~~gdG~af~~~~~~   86 (218)
T cd07308          19 IGNWTVGGSTVITKNYIRLTPD---VPSQSGSLWSRVPIPA--------KDFEIEVEFSIHGGS-GLGGDGFAFWYTEEP   86 (218)
T ss_pred             cCCeEEcCCeEEeCCEEEeCCC---CCCCEeEEEeCCCccC--------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCC
Confidence            4689999999999999999997   4678999999999998        489999999998764 568999999999965


Q ss_pred             CCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcc-ccc------ccCCCccccccC-CCCeE
Q 041096          114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLE-SIK------TADPILQGIDLK-SGNVI  185 (645)
Q Consensus       114 ~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~-s~~------~~~~~~~~~~~~-~g~~~  185 (645)
                      ..   .|..+|.     ....+.+||||||+.|.   +-...+|.+-+|.-. +..      ......-.+... .+.++
T Consensus        87 ~~---~g~~~G~-----~~~~~Glai~fdt~~n~---~~~~p~i~~~~Ndg~~~~~~~~d~~~~~~~~c~~~~~~~~~~~  155 (218)
T cd07308          87 GS---DGPLFGG-----PDKFKGLAIFFDTYDND---GKGFPSISVFLNDGTKSYDYETDGEKLELASCSLKFRNSNAPT  155 (218)
T ss_pred             CC---CCccccc-----CCCCCEEEEEEEcCCCC---CCCCCeEEEEEeCCCceecccCCCccccccceeEecccCCCCe
Confidence            43   4555565     23467799999999985   223345555443322 110      111111111222 26789


Q ss_pred             EEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeee
Q 041096          186 TAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ  251 (645)
Q Consensus       186 ~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~  251 (645)
                      +++|.|+  .+.|.|.+.+........++..  +.. .+|+..|+||||+||...+.|.|++|.+.
T Consensus       156 ~~~I~y~--~~~l~v~i~~~~~~~~~~c~~~--~~~-~l~~~~y~G~sA~tg~~~d~~dIls~~~~  216 (218)
T cd07308         156 TLRISYL--NNTLKVDITYSEGNNWKECFTV--EDV-ILPSQGYFGFSAQTGDLSDNHDILSVHTY  216 (218)
T ss_pred             EEEEEEE--CCEEEEEEeCCCCCCccEEEEc--CCc-ccCCCCEEEEEeccCCCcCcEEEEEEEee
Confidence            9999999  6899999975433333333322  211 46788999999999999999999999874

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.5e-23  Score=200.65  Aligned_cols=245  Identities=20%  Similarity=0.342  Sum_probs=182.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeee-eeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGW-CAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~-~~~~~~~~lV~E  424 (645)
                      .+.|.+.+.||+|.||.+-++.++.++..+++|.+.......++|.+|...--.| .|.||+.-+.. ++..+.+..++|
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            3567888999999999999999999999999999988888889999998775556 48999988764 677788899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE-cCC-CCeeeeccc-ccccc
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML-DAN-FNARLESSF-TLTAG  501 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll-d~~-~~~kl~d~~-~~~~g  501 (645)
                      |+|.|+|.+-+...+     +......+++.|+++|+.|+|+   ..+||||||.+|||| +.| ..+|+.|.. +...|
T Consensus       103 ~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             cCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            999999999886533     7778888999999999999999   999999999999998 333 367777732 22233


Q ss_pred             --------CCcccCcccccC---C--CCCcchhHHHHHHHHHHHHcCCCCCCccccc-cchhhHHHHHHhhhccCchhHH
Q 041096          502 --------TMGYLAPEYLQY---G--TATEKTDVFSYGVVVLEVACGRRPIERETEG-HKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       502 --------t~~y~APE~~~~---~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                              +..|.+||....   +  ...+.+|||.||++++.++||+.||+..... ..+.....|     ..+...  
T Consensus       175 ~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w-----~~rk~~--  247 (378)
T KOG1345|consen  175 TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW-----LKRKNP--  247 (378)
T ss_pred             ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH-----hcccCc--
Confidence                    456899997653   2  2477899999999999999999999854321 122222333     222211  


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      .-|+.-..+.    +.++.+-..-+.++|++|=...++.++..
T Consensus       248 ~~P~~F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk  286 (378)
T KOG1345|consen  248 ALPKKFNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRK  286 (378)
T ss_pred             cCchhhcccC----HHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence            1112212232    34445556778899999966555555443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=7.3e-20  Score=193.10  Aligned_cols=153  Identities=22%  Similarity=0.235  Sum_probs=120.7

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECC-CCeEEEEEeccCC------cchhHhHHHHHHHHhhcCCCCeee-eeeeeee
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFAS-SGSVAAVKRSKHS------HEGKTEFLAELSIIACLRHKNLVQ-LLGWCAE  415 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~-l~g~~~~  415 (645)
                      ....++|...+.||+|+||+||+|.+.. ++..+|||+....      ....+.|.+|+++|++++|+|++. ++.+   
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            3456789999999999999999998865 6788899986532      123556999999999999999985 4432   


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCC-CCCcEEEcCCCCeeeec
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDI-KASNIMLDANFNARLES  494 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NIlld~~~~~kl~d  494 (645)
                       +..+|||||+++++|... .  .     ..   ...++.|++++|.|||+   ++|+|||| ||+|||++.++.++|.|
T Consensus        91 -~~~~LVmE~~~G~~L~~~-~--~-----~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiD  155 (365)
T PRK09188         91 -GKDGLVRGWTEGVPLHLA-R--P-----HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVID  155 (365)
T ss_pred             -CCcEEEEEccCCCCHHHh-C--c-----cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEE
Confidence             457999999999999632 1  1     11   14578899999999999   99999999 99999999999999987


Q ss_pred             cc--------------------cccccCCcccCcccccCC
Q 041096          495 SF--------------------TLTAGTMGYLAPEYLQYG  514 (645)
Q Consensus       495 ~~--------------------~~~~gt~~y~APE~~~~~  514 (645)
                      ..                    ....++..|+|||.+...
T Consensus       156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            22                    123467789999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.81  E-value=2.7e-18  Score=177.78  Aligned_cols=247  Identities=31%  Similarity=0.407  Sum_probs=185.7

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc----hhHhHHHHHHHHhhcCCC-CeeeeeeeeeeCCeEEEEEe
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHK-NLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~----~~~~~~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~lV~E  424 (645)
                      |...+.||.|+||.||++...   ..+++|.+.....    ....+.+|+.++..+.|+ +++++.+.+......++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            556778999999999999987   6788888776322    367899999999999988 79999999977777899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeecc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESS--------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~--------  495 (645)
                      |+.+++|.+++...... ..+.......++.|++.++.|+|+   .+++|||+||+||+++... ..++.|.        
T Consensus        79 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          79 YVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             cCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence            99999999777654321 238889999999999999999999   8999999999999999888 5777651        


Q ss_pred             ----------ccccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          496 ----------FTLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                .....|+..|+|||.+..   ..+....|+||+|++++++++|..||.............+........ 
T Consensus       155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-  233 (384)
T COG0515         155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-  233 (384)
T ss_pred             CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-
Confidence                      134578999999999987   578999999999999999999999976543210011111111111100 


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                          .................+.+++..|+..+|..|.++.+....
T Consensus       234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 ----SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ----ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence                000000000001223567788889999999999999887764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=1.7e-18  Score=182.32  Aligned_cols=249  Identities=20%  Similarity=0.213  Sum_probs=184.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCC-eEEEEEeccCCc-chhHhHHHHHHHHhhcCC----CCeeeeeeee-eeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSG-SVAAVKRSKHSH-EGKTEFLAELSIIACLRH----KNLVQLLGWC-AEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H----~niv~l~g~~-~~~~~~~l  421 (645)
                      +|...++||+|+||.||++.....+ ..+|+|...... .....+..|+.++..+.+    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            7889999999999999999987654 578888766532 222268889999999873    5888888888 47778899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-----Ceeeec--
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-----NARLES--  494 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-----~~kl~d--  494 (645)
                      ||+.+ +.+|.++.....  ...++..+.+.|+.|++.+|++||+   .+++||||||.|+++....     ...+.|  
T Consensus        99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            99998 899999876554  3348999999999999999999999   9999999999999997553     222222  


Q ss_pred             ---------c-----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          495 ---------S-----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       495 ---------~-----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                               .           .....||..|.++....+...+.+.|+||++.++.|+..|..||...........+.. 
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~-  251 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK-  251 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH-
Confidence                     0           1123499999999999999999999999999999999999999966443222111111 


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                                  ..............+..+.++...+-..+...+|....+...|++.....
T Consensus       252 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  252 ------------DPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             ------------HhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence                        11111111011223344555555566689999999999998887665544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.77  E-value=2.5e-19  Score=200.72  Aligned_cols=237  Identities=24%  Similarity=0.215  Sum_probs=170.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHH--HhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSI--IACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~--l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++...+.||++.|=+|.+|++.+ |. |+||++-+.  .-..+.|.++++-  ...++|||.+.+.-+-...+..|||-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            56667889999999999999875 44 788887652  2334445444433  455689999999988777777889999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec----------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES----------  494 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d----------  494 (645)
                      |+ .-+|++.|..+.    .|...+...|+.|++.||.-+|.   .+|+|||||.+||||++-+=+-+.|          
T Consensus       102 yv-khnLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen  102 YV-KHNLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HH-hhhhhhhhccch----HHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            98 448888886543    47888899999999999999999   9999999999999998644444433          


Q ss_pred             ---------cccccccCCcccCcccccCC-----------CCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHH
Q 041096          495 ---------SFTLTAGTMGYLAPEYLQYG-----------TATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       495 ---------~~~~~~gt~~y~APE~~~~~-----------~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~  553 (645)
                               .+.....-.+|+|||-+...           ..+++-||||.||++.||++ |++||.-       ..+..
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-------SQL~a  246 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-------SQLLA  246 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-------HHHHh
Confidence                     22222334579999976431           15778999999999999988 6777753       23333


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +....   ....+.+-..+..       ..+.++++.|++.||++|.++++.++.-.+.
T Consensus       247 Yr~~~---~~~~e~~Le~Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  247 YRSGN---ADDPEQLLEKIED-------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HhccC---ccCHHHHHHhCcC-------ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            22111   1111111122211       2577888999999999999999998874433

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.77  E-value=9.5e-19  Score=187.92  Aligned_cols=204  Identities=22%  Similarity=0.352  Sum_probs=155.8

Q ss_pred             HhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCe-eeCC
Q 041096          398 IACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV-IHRD  476 (645)
Q Consensus       398 l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vHrD  476 (645)
                      |+.+.|.|+.+++|.|.++...++|.+||..|+|.+.+.....+   ++|.....++++++.||+|||.   .+| .|+.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~---~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~   74 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIK---LDYFFILSFIRDISKGLAYLHN---SPIGYHGA   74 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccC---ccHHHHHHHHHHHHHHHHHHhc---Ccceeeee
Confidence            45789999999999999999999999999999999999875443   9999999999999999999998   454 9999


Q ss_pred             CCCCcEEEcCCCCeeeeccccccc--------------cCCcccCcccccCCC-------CCcchhHHHHHHHHHHHHcC
Q 041096          477 IKASNIMLDANFNARLESSFTLTA--------------GTMGYLAPEYLQYGT-------ATEKTDVFSYGVVVLEVACG  535 (645)
Q Consensus       477 lkp~NIlld~~~~~kl~d~~~~~~--------------gt~~y~APE~~~~~~-------~t~ksDV~SfGvvl~El~tG  535 (645)
                      ++++|+++|.....|+.+..-...              -..-|.|||.+....       .+.++||||||++++|+++.
T Consensus        75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r  154 (484)
T KOG1023|consen   75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR  154 (484)
T ss_pred             eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence            999999999999999977221111              123489999987631       47789999999999999999


Q ss_pred             CCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          536 RRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       536 ~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      +.||...........++..+..     .-.....|.+...  .+....+..++..||..+|.+||++++|-..++....
T Consensus       155 ~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  155 SGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             cCccccccccCChHHHHHHHHh-----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            9999875433322233333222     0001111111110  1334478999999999999999999999988875543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=3.8e-19  Score=199.53  Aligned_cols=239  Identities=22%  Similarity=0.281  Sum_probs=176.0

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEecc----CCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~----~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ..+++|.|.+|.|+...........+.|...    ....   ....+..|+.+-..++|+|++..+..+.+.....-.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            4678999999988877765545544544332    2111   11225667788888999999998888877766666699


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      ||++ +|...+.....    +.-.++..+++|+..|+.|||+   .++.|||+|++|++++.++..|+.|..        
T Consensus       402 ~~~~-Dlf~~~~~~~~----~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNGK----LTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             cccH-HHHHHHhcccc----cchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            9999 99999976522    7888899999999999999999   999999999999999999999997722        


Q ss_pred             --------cccccCCcccCcccccCCCCCc-chhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATE-KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~-ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                              ...+|+..|+|||.+....|.+ ..||||.|+++..|++|+.||......+.......     ...+...  
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-----~~~~~~~--  546 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-----YSDQRNI--  546 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc-----ccccccc--
Confidence                    2346899999999999998865 68999999999999999999976543322110000     0000000  


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .... ...-...+.....++..+++++|.+|-|+++|++
T Consensus       547 -~~~~-~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  547 -FEGP-NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             -ccCh-HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence             0000 0112234566777888999999999999999986

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.76  E-value=1.4e-16  Score=159.02  Aligned_cols=196  Identities=19%  Similarity=0.220  Sum_probs=131.1

Q ss_pred             CCCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecC
Q 041096           33 NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPD  112 (645)
Q Consensus        33 ~~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~  112 (645)
                      ...++.+.|+|.+.++.|+||++   .+++.|++||+.|+++        .+|+|+|+|+|.+.+...+||||||+++..
T Consensus        18 ~i~~w~~~G~a~v~~~~IrLTp~---~~~~~G~~w~~~p~~~--------~~F~~~f~F~I~~~~~~~~GdGlAfw~t~~   86 (248)
T cd06901          18 SMPLWDFLGSTMVTSQYIRLTPD---HQSKQGSIWNRVPCYL--------RDWEMHVHFKVHGSGKNLFGDGFAIWYTKE   86 (248)
T ss_pred             CCCCEEEcceEEEcCCeEEECCC---CCCCEEEEeccCCccC--------CCEEEEEEEEEeCCCCCCCCCEEEEEEEcC
Confidence            36799999999999999999997   3457999999999998        579999999999876667899999999986


Q ss_pred             CCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCC-CCCCCeeeeecCCc-ccccc------cCCC--ccccccCCC
Q 041096          113 NQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFD-DPDENHIGLDIDSL-ESIKT------ADPI--LQGIDLKSG  182 (645)
Q Consensus       113 ~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~-d~~~~Hvgi~vns~-~s~~~------~~~~--~~~~~~~~g  182 (645)
                      ..   ..|..+|-.     ....-+||-|||+.|..-. .....-|.+-+|.- ..-..      ....  ...+ -+.+
T Consensus        87 ~~---~~G~~fG~~-----~~f~Gl~I~~Dt~~n~~~~~~~~~P~i~~~~NDGt~~yd~~~Dg~~~~~~~C~~~~-rn~~  157 (248)
T cd06901          87 RM---QPGPVFGSK-----DNFHGLAIFFDTYSNQNGEHEHVHPYISAMVNNGSLSYDHDRDGTHTELAGCSAPF-RNKD  157 (248)
T ss_pred             CC---ccCcccccC-----CCCceEEEEEECCCCCCCcccCCCceEEEEEcCCCeeecccCCCchhhcCceeeec-cCCC
Confidence            54   234444442     2244589999999885310 01112233322221 11000      0001  1111 1334


Q ss_pred             CeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeec
Q 041096          183 NVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS  253 (645)
Q Consensus       183 ~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~  253 (645)
                      .+.+++|.|..  ..+.|.++..+...-..|+..   -.-.||...|+||||+||...+.|.|++-.+...
T Consensus       158 ~~t~~rI~Y~~--~~l~v~vd~~~~~~w~~Cf~~---~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~~l  223 (248)
T cd06901         158 HDTFVAIRYSK--GRLTVMTDIDGKNEWKECFDV---TGVRLPTGYYFGASAATGDLSDNHDIISMKLYEL  223 (248)
T ss_pred             CCeEEEEEEEC--CeEEEEEecCCCCceeeeEEe---CCeecCCCCEEEEEecCCCCCCcEEEEEEEEecC
Confidence            55789999996  457777764332222334332   1223577799999999999999999999887653

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.74  E-value=1.7e-17  Score=168.10  Aligned_cols=224  Identities=19%  Similarity=0.250  Sum_probs=147.3

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCC----------CCeeeeeeee--
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRH----------KNLVQLLGWC--  413 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H----------~niv~l~g~~--  413 (645)
                      +...+.||.|+++.||.+++.++++.+|+|.+...    ....+++++|.-....+.+          -.++.-++..  
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            34467899999999999999999999999976542    2334567777655555432          1222222211  


Q ss_pred             -------eeCC--------eEEEEEecCCCCCHhHHhh---hcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeC
Q 041096          414 -------AEKG--------ELLLVYEYMPNGSLDRMLY---QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR  475 (645)
Q Consensus       414 -------~~~~--------~~~lV~Ey~~~gsL~~~l~---~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr  475 (645)
                             ....        ..+++|+-+ .++|...+.   ........+....++.+..|+.+.+++||+   .+++|+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHg  169 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHG  169 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEES
T ss_pred             cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEec
Confidence                   1111        236778877 678877753   333223345667788888999999999999   999999


Q ss_pred             CCCCCcEEEcCCCCeeeeccccc---------cccCCcccCcccccCC--------CCCcchhHHHHHHHHHHHHcCCCC
Q 041096          476 DIKASNIMLDANFNARLESSFTL---------TAGTMGYLAPEYLQYG--------TATEKTDVFSYGVVVLEVACGRRP  538 (645)
Q Consensus       476 Dlkp~NIlld~~~~~kl~d~~~~---------~~gt~~y~APE~~~~~--------~~t~ksDV~SfGvvl~El~tG~~P  538 (645)
                      ||||+|++++.+|...+++....         ...+..|.+||.....        .++.+.|.|++|+++|.|+||+.|
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP  249 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP  249 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence            99999999999999999883221         2345678999976432        478899999999999999999999


Q ss_pred             CCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCC
Q 041096          539 IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR  599 (645)
Q Consensus       539 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  599 (645)
                      |...........                    . -..+. +.++.+..|+...++++|.+|
T Consensus       250 f~~~~~~~~~~~--------------------~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  250 FGLSSPEADPEW--------------------D-FSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             TCCCGGGSTSGG--------------------G-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCccccccc--------------------c-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence            986543221100                    1 12344 778889999999999999988

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.74  E-value=3.2e-18  Score=168.44  Aligned_cols=169  Identities=12%  Similarity=0.058  Sum_probs=126.7

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhH----------hHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT----------EFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~----------~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      ..++|+..++||.|+||.||+...  ++..+|+|.+.......+          .+.+|+..+.+++|++|..+..++..
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            457899999999999999999655  366799999875322211          26899999999999999999888553


Q ss_pred             C--------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC
Q 041096          416 K--------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       416 ~--------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~  487 (645)
                      .        ...+|||||++|.+|.++..        ++.    ....+++.+|..||+   .+++|||+||+||+++.+
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~  171 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKN  171 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCC
Confidence            2        35899999999999988732        222    245699999999999   999999999999999988


Q ss_pred             CCeeeeccccccccCCcccCcccccCCCCCcchhHHHHHHHHHHH
Q 041096          488 FNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV  532 (645)
Q Consensus       488 ~~~kl~d~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El  532 (645)
                      + .++.|............-..+...+.+..++|+||||+.+.-.
T Consensus       172 g-i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        172 G-LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             C-EEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHH
Confidence            8 8888832221111111111234455677899999999987654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=1.1e-17  Score=159.26  Aligned_cols=242  Identities=19%  Similarity=0.265  Sum_probs=177.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .+.|...++||+|+||.+|.|....+|+.||||.-.. .....+...|..+...|+| ..|..+.-+..++..-.||||.
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL   92 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL   92 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence            3678899999999999999999999999999997654 2233457789999999975 5677777778888889999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC------------CCeeee
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN------------FNARLE  493 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~------------~~~kl~  493 (645)
                      + +.||.+.+.-....   ++..+.+-++-|+..-++|+|.   ++++||||||+|+|..-+            ...|--
T Consensus        93 L-GPsLEdLfnfC~R~---ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   93 L-GPSLEDLFNFCSRR---FTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             c-CccHHHHHHHHhhh---hhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            8 88999988655433   8889999999999999999999   999999999999986432            222221


Q ss_pred             c----------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          494 S----------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       494 d----------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                      |          ......||.+|.+--...+-..+.+.|+-|+|.+|...--|..||++.......+.+-           
T Consensus       166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE-----------  234 (341)
T KOG1163|consen  166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE-----------  234 (341)
T ss_pred             cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH-----------
Confidence            2          1123468999988877777777889999999999999999999998865433222111           


Q ss_pred             hhHHhhhhcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          564 IIEAADKRLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       564 ~~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                        .+...++.   .......+.++...+.-|-..--++-|...-+.+.+
T Consensus       235 --kI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF  281 (341)
T KOG1163|consen  235 --KISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF  281 (341)
T ss_pred             --HHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence              11111110   111222344555556678788888888865554443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.71  E-value=3.5e-17  Score=158.61  Aligned_cols=132  Identities=18%  Similarity=0.170  Sum_probs=100.3

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcc---h-------hHh-----------------HHHHHHHHhhcCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---G-------KTE-----------------FLAELSIIACLRHKN  405 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~-------~~~-----------------~~~Ei~~l~~l~H~n  405 (645)
                      ...||+|+||.||+|... +|+.||||+++....   .       ...                 ...|++.+.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            357999999999999987 789999998865321   1       112                 234999999998877


Q ss_pred             eeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHH-hhcCCCCeeeCCCCCCcEEE
Q 041096          406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL-HQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       406 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NIll  484 (645)
                      +.....+..  ...+|||||+++++|........    .++..+...++.|++.+|.|| |+   .+|+||||||+|||+
T Consensus        81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~----~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDA----PLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcC----CCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence            643332221  22389999999887765533222    388999999999999999999 56   899999999999999


Q ss_pred             cCCCCeeeecc
Q 041096          485 DANFNARLESS  495 (645)
Q Consensus       485 d~~~~~kl~d~  495 (645)
                      + ++..++.|.
T Consensus       152 ~-~~~v~LiDF  161 (190)
T cd05147         152 H-DGKLYIIDV  161 (190)
T ss_pred             E-CCcEEEEEc
Confidence            8 467888774

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10345 hypothetical protein; Provisional

Probab=99.70  E-value=1.6e-16  Score=155.73  Aligned_cols=134  Identities=17%  Similarity=0.219  Sum_probs=104.6

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhc-----CCCCeeeeeeeeeeCC---e-EE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACL-----RHKNLVQLLGWCAEKG---E-LL  420 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l-----~H~niv~l~g~~~~~~---~-~~  420 (645)
                      ...++||+|+||.||.  ++.++.. +||+.... ....+.+.+|+.+++.+     .||||++++|++.++.   . +.
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            3467899999999996  5555555 68877653 33456799999999999     5799999999998863   4 34


Q ss_pred             EEEec--CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHH-HHHhhcCCCCeeeCCCCCCcEEEcCC----CCeeee
Q 041096          421 LVYEY--MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL-TYLHQECEQQVIHRDIKASNIMLDAN----FNARLE  493 (645)
Q Consensus       421 lV~Ey--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDlkp~NIlld~~----~~~kl~  493 (645)
                      +|+||  +++++|.+++.+..     ++..  ..++.+++.++ +|||+   ++|+||||||+|||++..    ...+|.
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~Li  151 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVC  151 (210)
T ss_pred             EEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence            78999  66899999996532     4444  35677888787 99999   999999999999999743    367887


Q ss_pred             cccc
Q 041096          494 SSFT  497 (645)
Q Consensus       494 d~~~  497 (645)
                      |.+.
T Consensus       152 Dg~G  155 (210)
T PRK10345        152 DNIG  155 (210)
T ss_pred             ECCC
Confidence            7443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.69  E-value=2.3e-16  Score=156.88  Aligned_cols=187  Identities=17%  Similarity=0.233  Sum_probs=155.9

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +|++.++||+|.||..+.|+.--++++||||.-.. +....++..|.+..+.|. .+.|...+-+..++.+-.||+|.+ 
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence            57788999999999999999888899999996433 333456778888888884 689999998888888899999999 


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-----eeeec--------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-----ARLES--------  494 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-----~kl~d--------  494 (645)
                      +-||.+++.-...   .++..+...+|.|+..-++|+|+   +.+|.|||||+|+||..-++     ..+.|        
T Consensus       107 GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  107 GPSLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             CcCHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            8899988764433   38999999999999999999999   99999999999999964332     22223        


Q ss_pred             -----------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 041096          495 -----------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET  543 (645)
Q Consensus       495 -----------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~  543 (645)
                                 ......||.+||+--...+...+.+-|+=|+|-+++..+-|..||.+..
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence                       2233469999999988888899999999999999999999999998754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=3.4e-16  Score=150.94  Aligned_cols=175  Identities=17%  Similarity=0.083  Sum_probs=131.1

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhH-----hHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEe
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT-----EFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~-----~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .....|++|+||+||.+..  .+..++.+.+.......+     .+.+|+++|++|+ |+++.+++++    +..+++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3467899999999997755  467777777766443222     5889999999995 5889999887    34699999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCC-CCCcEEEcCCCCeeeecccccc----
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDI-KASNIMLDANFNARLESSFTLT----  499 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NIlld~~~~~kl~d~~~~~----  499 (645)
                      |+.+.+|...+..           ....++.|++++|.++|+   .+|+|||| ||+|||++.++.+++.|.....    
T Consensus        79 yI~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         79 YLAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             eecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            9999998754321           113477899999999999   99999999 7999999999999998732211    


Q ss_pred             ---------------------ccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccc
Q 041096          500 ---------------------AGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEG  545 (645)
Q Consensus       500 ---------------------~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~  545 (645)
                                           ..++.|++|+-..-  ..--...+.++-|.-+|.++|++.+.....++
T Consensus       145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~  213 (218)
T PRK12274        145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEG  213 (218)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCC
Confidence                                 13555666653321  22225679999999999999999998765443

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.68  E-value=7.4e-15  Score=144.76  Aligned_cols=191  Identities=21%  Similarity=0.198  Sum_probs=132.0

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|+|.+.++.|+||++   .+++.|.+|.+.|++.        -+|+.+|+|+|.... ..+||||||.++...
T Consensus        21 i~~W~~~G~t~~~~~~IrLTp~---~~~~~G~iw~~~~~~~--------~~w~ie~~Fri~g~~-~~~gdG~a~W~t~~~   88 (225)
T cd06902          21 VPFWSHGGDAIASLEQVRLTPS---LRSKKGSVWTKNPFSF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTKER   88 (225)
T ss_pred             CCceEecccEEecCCEEEECCC---CCCCEEEEeeCCCcCC--------CCEEEEEEEEEecCC-CCCCCEEEEEEECCC
Confidence            4689999999999999999997   5778999999999983        369999999999764 356899999999764


Q ss_pred             CCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCc-cccccc-CC-----Ccccccc-CCCCeE
Q 041096          114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSL-ESIKTA-DP-----ILQGIDL-KSGNVI  185 (645)
Q Consensus       114 ~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~-~s~~~~-~~-----~~~~~~~-~~g~~~  185 (645)
                      .   ..|+.+|..     ....-+||.|||+.|..  ..+...|.+-+|.- ..-... ..     ..-.... +...+.
T Consensus        89 ~---~~G~~~G~~-----~~f~Gl~I~~Dt~~n~~--~~~~p~i~~~~NDGt~~yd~~~D~~~~~~~~C~~~~rn~~~p~  158 (225)
T cd06902          89 G---EEGPVFGSS-----DKWNGVGIFFDSFDNDG--KKNNPAILVVGNDGTKSYDHQNDGLTQALGSCLRDFRNKPYPV  158 (225)
T ss_pred             C---CCCCccCCC-----CcccEEEEEEECCCCCC--CCCCcEEEEEECCCCeeccccCCCcccccceEEEeccCCCCCe
Confidence            3   245556552     23456899999998753  23334565544332 111110 00     0000112 235678


Q ss_pred             EEEEEecCCCceEEEEEEeCCC---CCCcceEEEeecCCc-cCCCccEEeEEeccCCccceeeeeeeeeee
Q 041096          186 TAWIDYKNDLRMLKVFMSYSNL---KPVTPLLKVNIDLSG-YLKGNMYVGFSASTEGSTELHMIQSWSFQT  252 (645)
Q Consensus       186 ~~~I~Y~~~~~~l~v~~~~~~~---~~~~~~l~~~vdl~~-~l~~~~~vGfsastg~~~~~~~i~sw~f~~  252 (645)
                      +++|.|..  ..|+|.++....   ....-|+.    +.. .||...|+||||+||...+.|+|++|+|.+
T Consensus       159 ~~rI~Y~~--~~l~V~~d~~~~~~~~~~~~Cf~----~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~s  223 (225)
T cd06902         159 RAKITYYQ--NVLTVSINNGFTPNKDDYELCTR----VENMVLPPNGYFGVSAATGGLADDHDVLSFLTFS  223 (225)
T ss_pred             EEEEEEEC--CeEEEEEeCCcCCCCCcccEEEe----cCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEec
Confidence            99999997  568888864321   11222332    222 457789999999999999999999999864

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.68  E-value=3.7e-16  Score=151.71  Aligned_cols=132  Identities=20%  Similarity=0.138  Sum_probs=102.2

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcch---------------------------hHhHHHHHHHHhhcCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---------------------------KTEFLAELSIIACLRHKN  405 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~Ei~~l~~l~H~n  405 (645)
                      ...||+|++|.||+|... +|..||||++......                           ...+..|.+.+.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            467999999999999987 7999999987753210                           112357889999999998


Q ss_pred             eeeeeeeeeeCCeEEEEEecCCCCCHhHH-hhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          406 LVQLLGWCAEKGELLLVYEYMPNGSLDRM-LYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       406 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +.....+...  ..+|||||++++++... +.. .    .++..+...++.|++.++.+||+  ..+|+||||||+|||+
T Consensus        81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-~----~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll  151 (190)
T cd05145          81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-V----PLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILY  151 (190)
T ss_pred             CCCceEEEec--CCEEEEEEecCCCchhhhhhh-c----cCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEE
Confidence            7544433322  24899999988865443 322 1    26788899999999999999997  3799999999999999


Q ss_pred             cCCCCeeeecc
Q 041096          485 DANFNARLESS  495 (645)
Q Consensus       485 d~~~~~kl~d~  495 (645)
                      + ++.+++.|.
T Consensus       152 ~-~~~~~liDF  161 (190)
T cd05145         152 H-DGKPYIIDV  161 (190)
T ss_pred             E-CCCEEEEEc
Confidence            9 788888773

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.65  E-value=4.5e-17  Score=174.99  Aligned_cols=178  Identities=27%  Similarity=0.380  Sum_probs=147.9

Q ss_pred             eeccCCceEEEEEEE---CCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          355 ILGRGAFGNVYKAYF---ASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~---~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+|.||.|+++.-   .+.+..+|+|..++.   .........|..++...+ ||.+|++.-.+..+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999987542   345677888877652   112225667888888887 9999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec--------ccccc
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES--------SFTLT  499 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d--------~~~~~  499 (645)
                      +|.|...+.+...    .+..........++-+++++|+   .+++|||+|++||+++.+|..++.|        .....
T Consensus        81 gg~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~  153 (612)
T KOG0603|consen   81 GGDLFTRLSKEVM----FDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA  153 (612)
T ss_pred             cchhhhccccCCc----hHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence            9999998876543    5666666677788999999999   9999999999999999999888866        22334


Q ss_pred             ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 041096          500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIER  541 (645)
Q Consensus       500 ~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~  541 (645)
                      +||..|||||++.  .....+|.||||++++||++|..||..
T Consensus       154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            8999999999998  567889999999999999999999976

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.9e-15  Score=153.47  Aligned_cols=183  Identities=23%  Similarity=0.283  Sum_probs=131.2

Q ss_pred             CCCCeeeeeeeeee---------------------------CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHH
Q 041096          402 RHKNLVQLLGWCAE---------------------------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV  454 (645)
Q Consensus       402 ~H~niv~l~g~~~~---------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~  454 (645)
                      +|||||++.+.|.+                           ...+|+||.-. ..+|++||..+.     .+...+.-|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~-----~s~r~~~~~l  347 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH-----RSYRTGRVIL  347 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC-----CchHHHHHHH
Confidence            68888888876643                           23589999877 459999997654     5566677789


Q ss_pred             HHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc--C---------CCCeeeeccc-----------cccccCCcccCccccc
Q 041096          455 VGLASALTYLHQECEQQVIHRDIKASNIMLD--A---------NFNARLESSF-----------TLTAGTMGYLAPEYLQ  512 (645)
Q Consensus       455 ~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld--~---------~~~~kl~d~~-----------~~~~gt~~y~APE~~~  512 (645)
                      .|+++|+.|||.   ++|.|||+|++||||.  +         |+.+++.|+.           -...|...-||||+..
T Consensus       348 aQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  348 AQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             HHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence            999999999999   9999999999999983  3         3444444421           1124677899999886


Q ss_pred             CCC------CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHH
Q 041096          513 YGT------ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLL  586 (645)
Q Consensus       513 ~~~------~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~  586 (645)
                      ..+      --.|+|.|+.|-+.||++....||.+..+  .......          ..+    .-....+..++..+.+
T Consensus       425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~L~~r~----------Yqe----~qLPalp~~vpp~~rq  488 (598)
T KOG4158|consen  425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--MLLDTRT----------YQE----SQLPALPSRVPPVARQ  488 (598)
T ss_pred             cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch--heechhh----------hhh----hhCCCCcccCChHHHH
Confidence            432      14689999999999999999999987321  1111111          111    1112345566777888


Q ss_pred             HHHHccCCCCCCCCCHHHHHHHH
Q 041096          587 VGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       587 l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                      ++...+++||++||+..-....|
T Consensus       489 lV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  489 LVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHHHhcCCccccCCccHHHhHH
Confidence            88899999999999976554444

>smart00090 RIO RIO-like kinase

Probab=99.58  E-value=9.3e-15  Score=146.60  Aligned_cols=135  Identities=18%  Similarity=0.198  Sum_probs=103.8

Q ss_pred             CCCcCceeccCCceEEEEEE-ECCCCeEEEEEeccCCcc-------------------------hhHhHHHHHHHHhhcC
Q 041096          349 GFHSNRILGRGAFGNVYKAY-FASSGSVAAVKRSKHSHE-------------------------GKTEFLAELSIIACLR  402 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~-~~~~~~~vavK~~~~~~~-------------------------~~~~~~~Ei~~l~~l~  402 (645)
                      .|...+.||+|+||.||+|. ...+|..||+|++.....                         ....+..|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47778899999999999998 556789999998764321                         0123568999999997


Q ss_pred             CC--CeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC-eeeCCCCC
Q 041096          403 HK--NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ-VIHRDIKA  479 (645)
Q Consensus       403 H~--niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlkp  479 (645)
                      +.  .+.+++++    ...++||||+++.+|...+....    .+...+...++.|++.++++||+   .+ ++||||||
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp  177 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSE  177 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCCh
Confidence            53  33444443    23489999999988876653222    25556678899999999999999   88 99999999


Q ss_pred             CcEEEcCCCCeeeecc
Q 041096          480 SNIMLDANFNARLESS  495 (645)
Q Consensus       480 ~NIlld~~~~~kl~d~  495 (645)
                      +||+++ ++..++.|.
T Consensus       178 ~NIli~-~~~i~LiDF  192 (237)
T smart00090      178 YNILVH-DGKVVIIDV  192 (237)
T ss_pred             hhEEEE-CCCEEEEEC
Confidence            999999 777888763

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.58  E-value=9.7e-15  Score=164.26  Aligned_cols=136  Identities=18%  Similarity=0.243  Sum_probs=107.5

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLRHKNLVQLLGWCAEK  416 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~  416 (645)
                      ......|...++||+|+||.||+|.+......+.++..+...       ...+.+.+|++++.+++|++++....++...
T Consensus       329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~  408 (535)
T PRK09605        329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP  408 (535)
T ss_pred             cccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence            334455677899999999999999886543322222221111       1235688999999999999999888888877


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ...++||||+++++|.+++.            ....++.+++++|.|||+   .+++||||||+|||+ .++..++.|.
T Consensus       409 ~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDF  471 (535)
T PRK09605        409 EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDF  471 (535)
T ss_pred             CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeC
Confidence            78899999999999998885            346789999999999999   999999999999999 5678888773

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=1.2e-14  Score=166.78  Aligned_cols=184  Identities=22%  Similarity=0.299  Sum_probs=145.0

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEE
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~  420 (645)
                      ..-...|.+.+.||+|+||+||+|...+ +..+|+|.-+....  .+|.--.+++.+|+   -+-|..+...+.-.+.-+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~--WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP--WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc--eeeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            3344568888999999999999999987 99999998776443  34444455566665   223334444444456779


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-------CCeeee
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-------FNARLE  493 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-------~~~kl~  493 (645)
                      ||+||.+.|+|.+++...    +.++|...+.++.|+++-+.+||.   .+|||+||||+|+||...       ...+|.
T Consensus       771 lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI  843 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLI  843 (974)
T ss_pred             eeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEE
Confidence            999999999999999733    349999999999999999999999   999999999999999432       234554


Q ss_pred             c--------------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCC
Q 041096          494 S--------------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRR  537 (645)
Q Consensus       494 d--------------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~  537 (645)
                      |              .+....+|-.+--+|...++.++.+.|-|.++-+++-|+.|+.
T Consensus       844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            4              3344567888888999999999999999999999999999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.57  E-value=2.1e-14  Score=141.53  Aligned_cols=128  Identities=20%  Similarity=0.309  Sum_probs=106.3

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +.||+|++|.||+|...  +..+++|.......         ....+.+|++++..++|+++.....++...+..+++||
T Consensus         2 ~~l~~G~~~~vy~~~~~--~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL--GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEeeC--CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            57999999999999873  66788887543211         12457889999999999998888877777778899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      |+++++|.+++...       .+ .+..++.+++.+|.+||+   .+++|||++|.|||++ ++.+++.|.
T Consensus        80 ~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf  138 (211)
T PRK14879         80 YIEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDF  138 (211)
T ss_pred             EeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEEC
Confidence            99999999998542       22 788999999999999999   9999999999999999 677777773

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.55  E-value=2.7e-14  Score=139.46  Aligned_cols=124  Identities=18%  Similarity=0.287  Sum_probs=99.8

Q ss_pred             eeccCCceEEEEEEECCCCeEEEEEeccCCc----c-----hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----E-----GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .||+|+||.||+|.+.  +..+++|......    .     ....+.+|++++..++|+++.....++...+..++||||
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            4899999999999864  6778888754311    1     125577899999999988766655566666678999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      +++++|.+++....     .      .++.+++.+|.+||+   .+++|||++|.||+++ ++.+++.|.
T Consensus        79 ~~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDf  133 (199)
T TIGR03724        79 IEGKPLKDVIEEGN-----D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDF  133 (199)
T ss_pred             ECCccHHHHHhhcH-----H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEEC
Confidence            99999998875421     1      789999999999999   9999999999999999 778888774

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.53  E-value=2.8e-15  Score=158.42  Aligned_cols=110  Identities=27%  Similarity=0.435  Sum_probs=97.0

Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec---
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES---  494 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d---  494 (645)
                      .+|+.|++|...+|.++|.++.. ....+|...+.++.|++.|+.|      ++.+|||+||.||+...+...||+|   
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL  402 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence            58999999999999999975543 3447899999999999999999      5789999999999998888888876   


Q ss_pred             ---------------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc
Q 041096          495 ---------------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC  534 (645)
Q Consensus       495 ---------------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t  534 (645)
                                     ..+..+||..||+||.+.++.|+.|+||||+|++|+|++.
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence                           2334579999999999999999999999999999999987

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.53  E-value=5.4e-14  Score=137.45  Aligned_cols=136  Identities=17%  Similarity=0.210  Sum_probs=104.4

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-----------------------hhHhHHHHHHHH
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-----------------------GKTEFLAELSII  398 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~Ei~~l  398 (645)
                      ++...-..|...+.||+|+||.||++... ++..+|||++.....                       ....+..|+.++
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            34343334777889999999999999885 589999998654221                       112367788999


Q ss_pred             hhcCCC--CeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCC
Q 041096          399 ACLRHK--NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRD  476 (645)
Q Consensus       399 ~~l~H~--niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD  476 (645)
                      .++.|+  .+...++.    ...++||||+++++|......          .....++.+++.++.++|+   .+++|||
T Consensus        88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~---~gi~H~D  150 (198)
T cd05144          88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYK---HGIIHGD  150 (198)
T ss_pred             HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHH---CCCCcCC
Confidence            999887  44444443    345899999999999765421          2345688999999999999   9999999


Q ss_pred             CCCCcEEEcCCCCeeeecc
Q 041096          477 IKASNIMLDANFNARLESS  495 (645)
Q Consensus       477 lkp~NIlld~~~~~kl~d~  495 (645)
                      |||+||+++.++.+++.|.
T Consensus       151 l~p~Nill~~~~~~~liDf  169 (198)
T cd05144         151 LSEFNILVDDDEKIYIIDW  169 (198)
T ss_pred             CCcccEEEcCCCcEEEEEC
Confidence            9999999999999999873

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.52  E-value=1.2e-14  Score=163.55  Aligned_cols=196  Identities=20%  Similarity=0.271  Sum_probs=132.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .+|+..++|..|++|.||...++.+.+..|+|+-+...     ..+-  ++.....|.+|                    
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn--ilt~a~npfvv--------------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN--ILTFAGNPFVV--------------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc--cccccCCccee--------------------
Confidence            57888999999999999999999888888885332211     1110  22222233332                    


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-------------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------  494 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-------------  494 (645)
                       |+-...++.-..    ++.        +++.+++|||+   .+|+|||+||+|.+|+.-+..|+.|             
T Consensus       136 -gDc~tllk~~g~----lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 -GDCATLLKNIGP----LPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             -chhhhhcccCCC----Ccc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence             333333332221    322        22779999999   9999999999999999988888866             


Q ss_pred             --------------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          495 --------------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       495 --------------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                                    .....+||+.|+|||++..+.|...+|+|++|+++||.+.|+.||.+...++....++......  
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w--  277 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--  277 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc--
Confidence                          1123589999999999999999999999999999999999999999865443332222211000  


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS  601 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  601 (645)
                                   .+-++..+.+..+++...++.+|..|--
T Consensus       278 -------------pE~dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  278 -------------PEEDEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             -------------cccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence                         1112223344555556677788888744

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.50  E-value=1.7e-12  Score=129.15  Aligned_cols=191  Identities=24%  Similarity=0.271  Sum_probs=124.4

Q ss_pred             CCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCCC
Q 041096           35 RNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQ  114 (645)
Q Consensus        35 ~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~~  114 (645)
                      .++.+.|+|.+.++.|+||++   .+++.|.+|.+.|++.        .+|+.+|+|+|........||||||.++....
T Consensus        22 ~~W~~~G~t~i~~~~IrLTp~---~~~~~G~iws~~~~~~--------~~w~i~~~Fri~g~~~~~~g~G~a~W~t~~~~   90 (229)
T PF03388_consen   22 PNWDIGGSTVITDNFIRLTPD---RQSQSGSIWSRKPIPF--------DNWEIEFTFRISGQEKGLGGDGMAFWYTKDPG   90 (229)
T ss_dssp             TTEEEEET-EEESSEEEEE-S---STTEEEEEEESS-BEE--------SEEEEEEEEEEESS-SSS-S-EEEEEEESSSS
T ss_pred             CCEEECCeEEecCCEEEECCC---cccCEEEEEEcCCCCc--------cCEEEEEEEEEeccccCcCCCeEEEEEEcCcc
Confidence            489999999999999999998   5778999999999987        37999999999987556689999999997554


Q ss_pred             CCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCC-CCCCCeeeeecCCcc-cccccCC----Ccc--cccc-CCCCeE
Q 041096          115 ILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFD-DPDENHIGLDIDSLE-SIKTADP----ILQ--GIDL-KSGNVI  185 (645)
Q Consensus       115 ~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~-d~~~~Hvgi~vns~~-s~~~~~~----~~~--~~~~-~~g~~~  185 (645)
                      .   .|..+|.     .....-+||=|||+.|.+-. ......|.+-+|.-. +-.....    ...  ..+. +.+.+.
T Consensus        91 ~---~G~~fG~-----~~~f~Gl~i~idt~~N~~~~~~~~~p~i~~~~NDGt~~~~~~~dg~~~~~~~C~~~~rn~~~p~  162 (229)
T PF03388_consen   91 S---DGPVFGG-----PDKFDGLGIFIDTYDNDEGGHKRGFPYISAMLNDGTKSYDHDNDGKDQSLGSCSADYRNSDVPT  162 (229)
T ss_dssp             S---SCSBTTB------SS-EEEEEEEEES-TTCTTCTSTSSEEEEEEEESSS---GGGTTTTT-SEEEE---BTESSEE
T ss_pred             c---cccccCC-----CcccceEEEEEEcccCCCcccccccceEEEEecCCCccccccccCcccccccceeccCcCCCCE
Confidence            3   5565664     22345589999999886421 112344555443321 1111100    000  1122 235678


Q ss_pred             EEEEEecCCCceEEEEEEe---CCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeee
Q 041096          186 TAWIDYKNDLRMLKVFMSY---SNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWS  249 (645)
Q Consensus       186 ~~~I~Y~~~~~~l~v~~~~---~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~  249 (645)
                      +++|.|..  +.+.|.+..   .....-..|+...   .-.||...|+||||+||...+.|+|++-.
T Consensus       163 ~~ri~Y~~--~~l~v~id~~~~~~~~~~~~Cf~~~---~v~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  163 RIRISYSK--NTLTVSIDSNYLKNQDDWELCFTTD---GVDLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             EEEEEEET--TEEEEEEETSCCSECCTTEEEEEES---TEEGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             EEEEEEEC--CeEEEEEecccccCCcCCcEEEEcC---CeecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence            99999986  467777762   2233445566642   12357788999999999999999999854

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=4.6e-14  Score=140.47  Aligned_cols=190  Identities=24%  Similarity=0.370  Sum_probs=141.4

Q ss_pred             HHhhcCCCCeeeeeeeeeeCC-----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 041096          397 IIACLRHKNLVQLLGWCAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ  471 (645)
Q Consensus       397 ~l~~l~H~niv~l~g~~~~~~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  471 (645)
                      -|-.+-|.|||+++.|+.+.+     +..+++|||..|+|..+|++.......+......+++-||..||.|||+ |.++
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp  198 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP  198 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence            355567999999999876543     5789999999999999999887776778888888999999999999998 6799


Q ss_pred             eeeCCCCCCcEEEcCCCCeeeecc----------------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC
Q 041096          472 VIHRDIKASNIMLDANFNARLESS----------------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACG  535 (645)
Q Consensus       472 ivHrDlkp~NIlld~~~~~kl~d~----------------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG  535 (645)
                      |+|+++..+-|++..++-.|++..                .....+-++|.|||+-.....+.++|||+||+..+||..+
T Consensus       199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail  278 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL  278 (458)
T ss_pred             cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence            999999999999999999998651                1122467899999998888889999999999999999887


Q ss_pred             CCC-CCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          536 RRP-IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       536 ~~P-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ..- -...........+..          ...-+...+.           ...+..|++.+|..||+|++++..
T Consensus       279 Eiq~tnseS~~~~ee~ia~----------~i~~len~lq-----------r~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  279 EIQSTNSESKVEVEENIAN----------VIIGLENGLQ-----------RGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             eeccCCCcceeehhhhhhh----------heeeccCccc-----------cCcCcccccCCCCCCcchhhhhcC
Confidence            642 221111000001100          0000011111           123468999999999999988653

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.49  E-value=3e-13  Score=124.74  Aligned_cols=129  Identities=21%  Similarity=0.200  Sum_probs=108.6

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC--CCeeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH--KNLVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .+.||+|.++.||++....  ..+++|....... ...+.+|+..+..++|  .++.++++++...+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            4679999999999999863  6789998866443 5678999999999987  599999999888888999999998877


Q ss_pred             HhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          431 LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       431 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      +..+           +......++.+++++|++||.....+++|+|++|+||+++..+..++.|.
T Consensus        80 ~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df  133 (155)
T cd05120          80 LDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDW  133 (155)
T ss_pred             cccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEec
Confidence            7643           45666788999999999999854457999999999999998888888774

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.41  E-value=2.6e-11  Score=118.56  Aligned_cols=182  Identities=20%  Similarity=0.241  Sum_probs=122.8

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|+|.+.++.|+||++    +++.|.+|-+.|+++-+       +|+.+|+|+|..+. ..+||||||.++...
T Consensus        20 i~~W~~~G~t~v~~~~IrLTp~----~s~~G~iWs~~pl~~~~-------~w~ie~~Fri~G~~-~~~gdGla~W~t~~~   87 (215)
T cd06903          20 IPNWQTSGNPKLESGRIILTPP----GNQRGSLWLKKPLSLKD-------EWTIEWTFRSTGPE-GRSGGGLNFWLVKDG   87 (215)
T ss_pred             CCCeEEcCcEEeeCCeEEECCC----CCceEeEeeCCcCCCCC-------CEEEEEEEEecccC-CcCCCEEEEEEECCC
Confidence            4689999999999999999997    45789999999998742       69999999998764 367999999999764


Q ss_pred             CCCCCCC-CccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCC-cccccccC-----CC--ccccccCCCCe
Q 041096          114 QILGSAG-GCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDS-LESIKTAD-----PI--LQGIDLKSGNV  184 (645)
Q Consensus       114 ~~~~~~g-~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns-~~s~~~~~-----~~--~~~~~~~~g~~  184 (645)
                      ...  .| ..+|-     .....-+||.|||+.|..      ..|.+-+|. -..-....     .+  .... .+.+.+
T Consensus        88 ~~~--~g~~~fG~-----~~~f~Gl~I~~Dt~~n~~------p~i~~~~NDGt~~yd~~~d~~~~~g~C~~~~-rn~~~p  153 (215)
T cd06903          88 NAD--VGTSSIYG-----PSKFDGLQLLIDNNGGSG------GSLRGFLNDGSKDYKNEDVDSLAFGSCLFAY-QDSGVP  153 (215)
T ss_pred             ccc--CCccccCC-----CCCCcEEEEEEECCCCCC------ceEEEEECCCCeeccccCCcccccceeeEec-cCCCCC
Confidence            421  11 22232     122344799999997631      233333322 11111111     11  1111 244667


Q ss_pred             EEEEEEecCCCceEEEEEEeCCCCCCcceEEE-eecCCccCC-CccEEeEEeccCCccceeeeeeeeee
Q 041096          185 ITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKV-NIDLSGYLK-GNMYVGFSASTEGSTELHMIQSWSFQ  251 (645)
Q Consensus       185 ~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~-~vdl~~~l~-~~~~vGfsastg~~~~~~~i~sw~f~  251 (645)
                      .+++|.|......|+|.++.      +.|+.. .+.    || ...|+||||+||...+.|.|++-.+-
T Consensus       154 ~~iri~Y~~~~~~l~v~vd~------~~Cf~~~~v~----lP~~~y~fGiSAaTg~~~d~hdIl~~~~~  212 (215)
T cd06903         154 STIRLSYDALNSLFKVQVDN------RLCFQTDKVQ----LPQGGYRFGITAANADNPESFEILKLKVW  212 (215)
T ss_pred             EEEEEEEECCCCEEEEEECC------CEEEecCCee----cCCCCCEEEEEEcCCCCCCcEEEEEEEEe
Confidence            89999998877888888742      133332 233    34 45689999999999999999987653

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.39  E-value=8.5e-13  Score=127.52  Aligned_cols=130  Identities=18%  Similarity=0.246  Sum_probs=90.0

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcch---hHhH----------------------HHHHHHHhhcCCCC--
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEF----------------------LAELSIIACLRHKN--  405 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~---~~~~----------------------~~Ei~~l~~l~H~n--  405 (645)
                      .+.||+|+||.||+|... ++..||||++......   ...+                      ..|...+.++.+..  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999987 6889999987653211   1111                      34555555554332  


Q ss_pred             eeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       406 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      +.+.+++    ...++||||++++.+.........    .. .+...++.+++.++.++|.  .++++||||||+||+++
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD  149 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE
Confidence            3334432    245899999998654322111110    11 5567899999999999997  37899999999999999


Q ss_pred             CCCCeeeecc
Q 041096          486 ANFNARLESS  495 (645)
Q Consensus       486 ~~~~~kl~d~  495 (645)
                       ++..++.|.
T Consensus       150 -~~~~~liDf  158 (187)
T cd05119         150 -DGKVYIIDV  158 (187)
T ss_pred             -CCcEEEEEC
Confidence             888888774

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.37  E-value=5.5e-12  Score=126.76  Aligned_cols=131  Identities=19%  Similarity=0.204  Sum_probs=100.6

Q ss_pred             Cceec-cCCceEEEEEEECCCCeEEEEEeccCC--------------cchhHhHHHHHHHHhhcCCCCe--eeeeeeeee
Q 041096          353 NRILG-RGAFGNVYKAYFASSGSVAAVKRSKHS--------------HEGKTEFLAELSIIACLRHKNL--VQLLGWCAE  415 (645)
Q Consensus       353 ~~~lG-~G~fg~Vy~g~~~~~~~~vavK~~~~~--------------~~~~~~~~~Ei~~l~~l~H~ni--v~l~g~~~~  415 (645)
                      ...|| .||.|+||+....  +..++||++...              ......+.+|++++.+|+|+++  +..++++..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            45788 8999999999885  677888877431              1223467889999999998875  677776543


Q ss_pred             CC----eEEEEEecCCC-CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          416 KG----ELLLVYEYMPN-GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       416 ~~----~~~lV~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      ..    ..++|+||+++ .+|.+++....     ++..    .+.+++.+|.+||+   .+|+||||||.|||++.++.+
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~-----l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v  181 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEAP-----LSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKF  181 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcCC-----CCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCE
Confidence            32    23599999997 69998885421     4433    35789999999999   999999999999999988888


Q ss_pred             eeecccc
Q 041096          491 RLESSFT  497 (645)
Q Consensus       491 kl~d~~~  497 (645)
                      ++.|...
T Consensus       182 ~LIDfg~  188 (239)
T PRK01723        182 WLIDFDR  188 (239)
T ss_pred             EEEECCC
Confidence            8887543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.25  E-value=1.1e-12  Score=147.77  Aligned_cols=241  Identities=24%  Similarity=0.258  Sum_probs=172.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-CCeEEEEEeccCCc---chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-SGSVAAVKRSKHSH---EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV  422 (645)
                      ..|...+.||+|.|+.|-...... ....+|+|.+....   ........|..+-..+. |+|++++++...+.+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            456666779999999998876633 34556777665533   22333445777777776 99999999999999999999


Q ss_pred             EecCCCCCHhHHh-hhcCCCCccCCHHHHHHHHHHHHHHHHHHh-hcCCCCeeeCCCCCCcEEEcCCC-Ceeeecc----
Q 041096          423 YEYMPNGSLDRML-YQDSENGVLLSWYHRLNIVVGLASALTYLH-QECEQQVIHRDIKASNIMLDANF-NARLESS----  495 (645)
Q Consensus       423 ~Ey~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~----  495 (645)
                      .||..++++.+-+ .....   ..+....-....|+..++.|+| .   .++.|||+||+|.+++..+ +.++.|.    
T Consensus       100 ~~~s~g~~~f~~i~~~~~~---~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At  173 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDST---GTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLAT  173 (601)
T ss_pred             cCcccccccccccccCCcc---CCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhc
Confidence            9999999998888 33221   2455566678999999999999 6   9999999999999999988 7777651    


Q ss_pred             -----------cccccc-CCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          496 -----------FTLTAG-TMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       496 -----------~~~~~g-t~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                 ....+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++.......  ....|...     
T Consensus       174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~--~~~~~~~~-----  246 (601)
T KOG0590|consen  174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG--RYSSWKSN-----  246 (601)
T ss_pred             cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc--cceeeccc-----
Confidence                       122467 9999999999885 457889999999999999999999876543221  11111100     


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .      .......-.........+...|+..+|..|.+.+++..
T Consensus       247 ~------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  247 K------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             c------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            0      00000111122334556667788899999999877754

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.14  E-value=2.9e-09  Score=106.29  Aligned_cols=193  Identities=20%  Similarity=0.219  Sum_probs=130.7

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|++.+...-|+||.+   .+++.|.++=..||...        +|...+.|.|..+.....|||||+.++-..
T Consensus        71 ~~~W~~~Gstvv~~~~irLT~d---~qsk~GAv~n~~Pv~s~--------~wev~v~fkv~~~s~~lfgdG~Aiw~t~Er  139 (351)
T KOG3839|consen   71 QPNWNLSGSTVVTSNYIRLTPD---EQSKSGAVWNRQPVFSR--------DWEVLVHFKVHGQSKNLFGDGMAIWYTKER  139 (351)
T ss_pred             ccCccccccEEEEeeeeecccc---ccccccccccCCCcccc--------ceeEEEEEEEecCCCcccccceEEEeeccc
Confidence            4589999999999999999998   57899999999999743        699999999999988899999999998765


Q ss_pred             CCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCC--CeeeeecCCcc-cc------cccCCCccccccCCCC-
Q 041096          114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDE--NHIGLDIDSLE-SI------KTADPILQGIDLKSGN-  183 (645)
Q Consensus       114 ~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~--~Hvgi~vns~~-s~------~~~~~~~~~~~~~~g~-  183 (645)
                      ..   +|.-+|-+     .+.+.+||=.||+-|.. +.+..  .-|.+.+|... |-      ..+.++.-..++++.. 
T Consensus       140 ~q---~GPvFG~~-----dkF~GL~vfidtY~n~~-g~~~~v~P~isvmv~~gs~sYD~~~Dg~~tel~gc~a~~rn~~~  210 (351)
T KOG3839|consen  140 AQ---PGPVFGSK-----DKFTGLAVFIDTYGNHN-GPHEHVFPYISVMVNIGSLSYDHSKDGTHTELAGCTANFRNLPH  210 (351)
T ss_pred             cc---CCCCCCCc-----ccceeEEEEEeccCCcC-CCcccceeeEEEEeccCCcccccCCCCCccccccceeeeccCCC
Confidence            43   56667763     23456899999998753 12221  12333332211 10      0111110011222222 


Q ss_pred             eEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCcc-CCCccEEeEEeccCCccceeeeeeeeeee
Q 041096          184 VITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGY-LKGNMYVGFSASTEGSTELHMIQSWSFQT  252 (645)
Q Consensus       184 ~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~-l~~~~~vGfsastg~~~~~~~i~sw~f~~  252 (645)
                      .-.+-|.|+.  ++|++..++.+.  ..  ..--.++.++ ||.--|+|+||+||..++.|.|.|-.+..
T Consensus       211 dt~~~iry~~--~~l~~~~dl~~~--~~--~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~kl~~  274 (351)
T KOG3839|consen  211 DTLVVIRYEK--KTLSISIDLEGP--NE--WIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSLKLFE  274 (351)
T ss_pred             cceeEEEecC--CceEEEEecCCC--ce--eeeeeeecceecccceEEeeeeccCccchhhHHHHhhhhh
Confidence            1357788987  777777765442  22  2333455554 46667899999999999999999876543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.10  E-value=9.6e-11  Score=126.62  Aligned_cols=234  Identities=25%  Similarity=0.268  Sum_probs=167.7

Q ss_pred             CCCcCceecc--CCceEEEEEEE--CCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEE
Q 041096          349 GFHSNRILGR--GAFGNVYKAYF--ASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       349 ~f~~~~~lG~--G~fg~Vy~g~~--~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~  420 (645)
                      .|.....+|.  |.+|.||.+..  ..++..+|+|+-+..   ......=.+|+....+++ |+|.++....+..++..+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4556778999  99999999998  778889999975442   233344567777777774 999999888889999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHH----HHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeecc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS----ALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESS  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~  495 (645)
                      +-+|++ +.+|..+.+....   .++....+....+..+    ||.++|+   ..++|-|+||.||++..+ ...++++.
T Consensus       195 iqtE~~-~~sl~~~~~~~~~---~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  195 IQTELC-GESLQSYCHTPCN---FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeccc-cchhHHhhhcccc---cCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCc
Confidence            999999 5788888765433   2556666677777777    9999999   999999999999999988 66665441


Q ss_pred             c-----------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 F-----------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ~-----------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .                 ....|...|++||... +.++..+|+|++|.+.+|..++..+.......       .|  ..
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-------~W--~~  337 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS-------SW--SQ  337 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC-------Cc--cc
Confidence            1                 1114677899999776 56888999999999999999987655332100       01  11


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+...        +..++...-...+.....++++.+|-.|++.+.+..
T Consensus       338 ~r~~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  338 LRQGY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ccccc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            11100        111222222233444677899999999999877754

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.05  E-value=8.3e-10  Score=104.61  Aligned_cols=125  Identities=17%  Similarity=0.098  Sum_probs=90.7

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCee-eeeeeeeeCCeEEEEEecCCCCCHh
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV-QLLGWCAEKGELLLVYEYMPNGSLD  432 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~gsL~  432 (645)
                      +.|+.|.++.||++...  +..+++|...........+..|+..+..+.+.+++ +++.+..  +..++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence            56889999999999875  67899998765433344678899999998765544 4444432  3458999999998876


Q ss_pred             HHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          433 RMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC--EQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       433 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ..-         .   ....++.+++++|+.||+..  ...++|+|++|.||+++ ++..++.|.
T Consensus        80 ~~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf  131 (170)
T cd05151          80 TED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDW  131 (170)
T ss_pred             ccc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEec
Confidence            430         1   11235678999999999822  12369999999999999 556777663

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.05  E-value=3e-09  Score=116.17  Aligned_cols=157  Identities=18%  Similarity=0.231  Sum_probs=118.4

Q ss_pred             EEEECCCCeEEEEEeccCCcc-hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCcc
Q 041096          366 KAYFASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL  444 (645)
Q Consensus       366 ~g~~~~~~~~vavK~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~  444 (645)
                      .|..+..+.+|.|+..+.+.. ......+-++.|+.|+||||++++.....++..|||+|-+.  .|..++.+.      
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------  101 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------  101 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------
Confidence            466666778888887766433 33446778889999999999999999999999999999873  677777653      


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc--cccCC----------cccCccccc
Q 041096          445 LSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL--TAGTM----------GYLAPEYLQ  512 (645)
Q Consensus       445 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~--~~gt~----------~y~APE~~~  512 (645)
                       .-....-.+.||+.||.|||+  +.+++|++|..+.|+|++.+..||++....  ..|+.          .|..|+.+.
T Consensus       102 -~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~  178 (690)
T KOG1243|consen  102 -GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID  178 (690)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence             234455678899999999997  378999999999999999999999873222  11222          244444333


Q ss_pred             CCCCCcchhHHHHHHHHHHHHcC
Q 041096          513 YGTATEKTDVFSYGVVVLEVACG  535 (645)
Q Consensus       513 ~~~~t~ksDV~SfGvvl~El~tG  535 (645)
                      ...  -..|.|-|||+++|++.|
T Consensus       179 ~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  179 PSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             ccc--cchhhhhHHHHHHHHhCc
Confidence            221  245999999999999999

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.02  E-value=1.7e-09  Score=118.13  Aligned_cols=133  Identities=19%  Similarity=0.172  Sum_probs=92.0

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcch-----------------------------------------hHhH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG-----------------------------------------KTEF  391 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~  391 (645)
                      .+.||.|++|.||+|++.+ |+.||||+.......                                         +-+|
T Consensus       122 ~~plasaSigQVh~A~l~~-G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVD-GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEecC-CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            3679999999999999974 789999987542100                                         0124


Q ss_pred             HHHHHHHhhcC----CCCeeeeeeeee-eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHH-HHHHHh
Q 041096          392 LAELSIIACLR----HKNLVQLLGWCA-EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS-ALTYLH  465 (645)
Q Consensus       392 ~~Ei~~l~~l~----H~niv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-gL~yLH  465 (645)
                      .+|...+.+++    |.+-+.+-..+. .....+|||||+++++|.++.......   .   .+..++..++. .+..+|
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ql~  274 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLNQVL  274 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHHHHH
Confidence            45555555542    333333333332 234579999999999998876532211   2   23456666666 467888


Q ss_pred             hcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          466 QECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       466 ~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      .   .+++|+|+||.||+++.++..++.|.
T Consensus       275 ~---~g~~H~D~hPgNilv~~~g~i~liDf  301 (437)
T TIGR01982       275 R---DGFFHADLHPGNIFVLKDGKIIALDF  301 (437)
T ss_pred             h---CCceeCCCCcccEEECCCCcEEEEeC
Confidence            7   99999999999999999998888773

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.97  E-value=9.4e-10  Score=121.79  Aligned_cols=136  Identities=15%  Similarity=0.131  Sum_probs=84.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-----------------------------------hhH---
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-----------------------------------GKT---  389 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-----------------------------------~~~---  389 (645)
                      ..|+. +.||+|++|.||+|+++++|+.||||+......                                   -.+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            35766 789999999999999988799999998864310                                   011   


Q ss_pred             ---hHHHHHHHHhhcC----CCCeeeeeeeeee-CCeEEEEEecCCCCCHhHH--hhhcCCCCccCCHHHHHHHHHHHHH
Q 041096          390 ---EFLAELSIIACLR----HKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRM--LYQDSENGVLLSWYHRLNIVVGLAS  459 (645)
Q Consensus       390 ---~~~~Ei~~l~~l~----H~niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~--l~~~~~~~~~l~~~~~~~i~~~ia~  459 (645)
                         +|.+|+.-+.+++    +.+.+.+-..+.+ ..+.+|||||+.|+.|.++  +.........+.......++.|   
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q---  275 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ---  275 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence               2334444444442    3333333333322 3456899999999999874  3222111111222222222233   


Q ss_pred             HHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeec
Q 041096          460 ALTYLHQECEQQVIHRDIKASNIMLDANF----NARLES  494 (645)
Q Consensus       460 gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d  494 (645)
                          +..   .+++|+|+||.||+++.++    ..++.|
T Consensus       276 ----if~---~GffHaDpHPGNIlv~~~g~~~~~i~llD  307 (537)
T PRK04750        276 ----VFR---DGFFHADMHPGNIFVSYDPPENPRYIALD  307 (537)
T ss_pred             ----HHh---CCeeeCCCChHHeEEecCCCCCCeEEEEe
Confidence                333   8999999999999999887    666655

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.91  E-value=1.2e-08  Score=100.95  Aligned_cols=136  Identities=18%  Similarity=0.216  Sum_probs=104.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcc--hhHhHHHHHHHHhhcCC--CCeeeeeeeeeeCC---eEEEEEecC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRH--KNLVQLLGWCAEKG---ELLLVYEYM  426 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~---~~~lV~Ey~  426 (645)
                      +.|+.|..+.||++...+ |..+++|.......  ....+..|.+++..+++  .++.+++.++....   ..++||||+
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            568999999999998864 57889998765433  45678999999999976  34577788776643   568999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC--------------------------------------  468 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------  468 (645)
                      ++.++...+..     ..++..++..++.++++.|..||+..                                      
T Consensus        83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (223)
T cd05154          83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM  157 (223)
T ss_pred             CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence            99988776532     12677788888889999999998521                                      


Q ss_pred             ---------------CCCeeeCCCCCCcEEEcC--CCCeeeecc
Q 041096          469 ---------------EQQVIHRDIKASNIMLDA--NFNARLESS  495 (645)
Q Consensus       469 ---------------~~~ivHrDlkp~NIlld~--~~~~kl~d~  495 (645)
                                     ...++|+|+++.||+++.  +....+.|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~  201 (223)
T cd05154         158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDW  201 (223)
T ss_pred             HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEec
Confidence                           245799999999999998  444566563

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.90  E-value=1.3e-09  Score=117.96  Aligned_cols=238  Identities=21%  Similarity=0.204  Sum_probs=164.3

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEEC-CCCeEEEEEeccCCcc---hhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFA-SSGSVAAVKRSKHSHE---GKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      ...+.+|.....||.|.|+.|++...+ .++..+++|.+...-.   +...-..|+.+...+ .|.++++....+...+.
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~  340 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ  340 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence            344567888999999999999998766 6788999997765322   222234566666665 48888887766666667


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeecccc
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESSFT  497 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~~~  497 (645)
                      .|+=-|||.++++.....-.    ..++...++++..|++.++.++|+   ..++|+|+||+||++..+ +..++++...
T Consensus       341 ~~ip~e~~~~~s~~l~~~~~----~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~  413 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRSVTS----QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGC  413 (524)
T ss_pred             ccCchhhhcCcchhhhhHHH----HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccc
Confidence            77999999999887666222    226777889999999999999998   999999999999999886 6666665322


Q ss_pred             c---------cccCCccc--CcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 L---------TAGTMGYL--APEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 ~---------~~gt~~y~--APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                      +         ..+..++.  +++......+..+.|+||||.-+.|.+++..--....+-   ..+        ..+    
T Consensus       414 ~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i--------~~~----  478 (524)
T KOG0601|consen  414 WTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTI--------RSG----  478 (524)
T ss_pred             ccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eee--------ecc----
Confidence            2         12233444  555556667889999999999999999887543321110   000        000    


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL  609 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L  609 (645)
                       .-+.    .+ .....+..+...+..+++..||.+.++....
T Consensus       479 -~~p~----~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~  515 (524)
T KOG0601|consen  479 -DTPN----LP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHS  515 (524)
T ss_pred             -cccC----CC-chHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence             0011    11 1124455566677889999999988776543

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.80  E-value=5.8e-07  Score=91.32  Aligned_cols=185  Identities=19%  Similarity=0.254  Sum_probs=121.7

Q ss_pred             eEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCCCCC
Q 041096           37 ITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL  116 (645)
Q Consensus        37 ~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~~~~  116 (645)
                      +...|||-.+...|+|+++   ..++.|.+|-+.-+++        -.|..+.+|+|++.+ .-++|||||--+...   
T Consensus        56 W~~~GdAIas~eqvRlaPS---mrsrkGavWtka~~~f--------e~weVev~~rVtGrG-RiGAdGlaiWYt~~~---  120 (497)
T KOG3838|consen   56 WSHHGDAIASSEQVRLAPS---MRSRKGAVWTKASVPF--------ENWEVEVQFRVTGRG-RIGADGLAIWYTRGR---  120 (497)
T ss_pred             eeecCcccccccceeeccc---cccccCceeecccCCc--------ccceEEEEEEecccc-cccCCceEEEEecCC---
Confidence            7788999888899999997   5678899977766655        358999999999875 567999999977532   


Q ss_pred             CCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcc-cccccCCC------ccccccCC-CCeEEEE
Q 041096          117 GSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLE-SIKTADPI------LQGIDLKS-GNVITAW  188 (645)
Q Consensus       117 ~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~-s~~~~~~~------~~~~~~~~-g~~~~~~  188 (645)
                      |-.|.-+|-.+     .=.-+++=||.|-|..  .-|+.-|.+-.|.-. +-.....+      .=.-++.| =-+++|+
T Consensus       121 G~~GpVfGg~d-----~WnGigiffDSfdnD~--qknnP~Is~~lndGt~~ydh~~DGasQ~LssCqrDFRNkPyPvRar  193 (497)
T KOG3838|consen  121 GHVGPVFGGLD-----SWNGIGIFFDSFDNDG--QKNNPAISVLLNDGTIPYDHPGDGASQGLSSCQRDFRNKPYPVRAR  193 (497)
T ss_pred             Ccccccccccc-----cccceEEEeecccccC--CcCCccEEEEecCCcccccCCCccHHHHHHHhhHHhccCCCCceEE
Confidence            22333333211     1123688899998742  335555666554322 21111111      00122332 2358999


Q ss_pred             EEecCCCceEEEEEEeCCC--CCCcceEEEeecCCc-cCCCccEEeEEeccCCccceeeeeeee
Q 041096          189 IDYKNDLRMLKVFMSYSNL--KPVTPLLKVNIDLSG-YLKGNMYVGFSASTEGSTELHMIQSWS  249 (645)
Q Consensus       189 I~Y~~~~~~l~v~~~~~~~--~~~~~~l~~~vdl~~-~l~~~~~vGfsastg~~~~~~~i~sw~  249 (645)
                      |+|-.  .+|.|.+..+..  .++.-|+    +... +||..-|+|.||+||....-|+|+++.
T Consensus       194 ItY~~--nvLtv~innGmtp~d~yE~C~----rve~~~lp~nGyFGvSAATGgLADDHDVl~Fl  251 (497)
T KOG3838|consen  194 ITYYG--NVLTVMINNGMTPSDDYEFCV----RVENLLLPPNGYFGVSAATGGLADDHDVLSFL  251 (497)
T ss_pred             EEEec--cEEEEEEcCCCCCCCCcceeE----eccceeccCCCeeeeeecccccccccceeeeE
Confidence            99974  889998875442  2233233    3333 458889999999999999999999875

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.78  E-value=1.8e-07  Score=99.49  Aligned_cols=170  Identities=17%  Similarity=0.242  Sum_probs=125.5

Q ss_pred             ceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEEEEEecCCC-CCHhHH
Q 041096          361 FGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELLLVYEYMPN-GSLDRM  434 (645)
Q Consensus       361 fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~Ey~~~-gsL~~~  434 (645)
                      -.+.||++..-+|..|++|++...+ +.......-+++++++.|.|+|++...+..    +..+++||+|.|+ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            4678999999999999999994322 222234566788999999999999988763    3478999999886 688877


Q ss_pred             hhhcCC-----------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccccccCC
Q 041096          435 LYQDSE-----------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTM  503 (645)
Q Consensus       435 l~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt~  503 (645)
                      ......           ++...+...+|.++.|+..||.++|+   .|+.-+-|.+++|+++.+...+|+....+.+   
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dv---  442 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDV---  442 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceee---
Confidence            654322           12347788999999999999999999   8999999999999999998888854221111   


Q ss_pred             cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC
Q 041096          504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP  538 (645)
Q Consensus       504 ~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P  538 (645)
                        +-++-...-.--.+-|.=.||.+++.|.||..-
T Consensus       443 --l~~d~~~~le~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  443 --LQEDPTEPLESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             --ecCCCCcchhHHhhhhHHHHHHHHHHHhhcccc
Confidence              111100000123467999999999999999654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.74  E-value=1e-07  Score=92.04  Aligned_cols=130  Identities=14%  Similarity=0.102  Sum_probs=90.0

Q ss_pred             ceeccCCceEEEEEEECC------CCeEEEEEeccCCc-----------------------chhHhH----HHHHHHHhh
Q 041096          354 RILGRGAFGNVYKAYFAS------SGSVAAVKRSKHSH-----------------------EGKTEF----LAELSIIAC  400 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~------~~~~vavK~~~~~~-----------------------~~~~~~----~~Ei~~l~~  400 (645)
                      ..||.|.-+.||.|...+      .+..+|||..+.+.                       ...+.+    .+|.+.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998653      24789999654210                       011122    379999998


Q ss_pred             cCC--CCeeeeeeeeeeCCeEEEEEecCCCCCHhH-HhhhcCCCCccCCHHHHHHHHHHHHHHHHHH-hhcCCCCeeeCC
Q 041096          401 LRH--KNLVQLLGWCAEKGELLLVYEYMPNGSLDR-MLYQDSENGVLLSWYHRLNIVVGLASALTYL-HQECEQQVIHRD  476 (645)
Q Consensus       401 l~H--~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrD  476 (645)
                      +..  -++...+++    ..-+|||||+.+..+.. .|...     .++..+...+..+++.+|..| |+   .+++|+|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGD  150 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKE---CNLVHAD  150 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            853  455555654    35689999997654422 22211     144456677889999999999 77   8999999


Q ss_pred             CCCCcEEEcCCCCeeeeccc
Q 041096          477 IKASNIMLDANFNARLESSF  496 (645)
Q Consensus       477 lkp~NIlld~~~~~kl~d~~  496 (645)
                      |++.|||++. +...+.|..
T Consensus       151 Ls~~NIL~~~-~~v~iIDF~  169 (197)
T cd05146         151 LSEYNMLWHD-GKVWFIDVS  169 (197)
T ss_pred             CCHHHEEEEC-CcEEEEECC
Confidence            9999999974 556776643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=98.68  E-value=2.7e-06  Score=82.34  Aligned_cols=195  Identities=19%  Similarity=0.228  Sum_probs=114.4

Q ss_pred             eeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEec--CCCCCCCCCCc
Q 041096           45 LRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISP--DNQILGSAGGC  122 (645)
Q Consensus        45 ~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p--~~~~~~~~g~~  122 (645)
                      +.+|.||||+.   ..+++|-+.|.+++|--+.      -...+|.+-.-.. ...++||+||||+-  ..+.++..||.
T Consensus        29 i~~g~LRLT~~---~~nqata~~~~~~FPs~~n------~v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~fGGs   98 (255)
T cd06900          29 VVNNRLRLTDA---SGNQATAVTLQRLFPSAGN------YVEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGAFGGS   98 (255)
T ss_pred             cccCeEEeccC---ccCcceeEEEeeeeccCCC------eEEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCCcCcc
Confidence            46899999998   4678999999998885321      2677777766654 46789999999983  33356889999


Q ss_pred             cccccCC--CCCC-CcEEEEEeeCCCCCCC-CCCC-------CCeeeeecCCcc-c----ccccCCCcccccc------C
Q 041096          123 LGLVNSS--QLTK-NKFVAIEFDTRLDPHF-DDPD-------ENHIGLDIDSLE-S----IKTADPILQGIDL------K  180 (645)
Q Consensus       123 lGl~~~~--~~~~-~~~vAVEFDt~~n~~~-~d~~-------~~Hvgi~vns~~-s----~~~~~~~~~~~~~------~  180 (645)
                      ||+--..  ..+. --.+.|-||-|-|..- .+..       -+-|+|-=..-. +    .+.+......++.      .
T Consensus        99 LGYa~~~~~~~GfaGGwLGiGlDEyGNFsn~~eg~~~~~g~r~~sV~vRGsg~g~~gY~yl~gt~~~~~~id~~~~~~~~  178 (255)
T cd06900          99 LGYAQRNDGVPGFAGGWLGIGLDEYGNFSNPNEGRNGFSGRRPQSVTVRGSGSGYTGYKYITGTGVLPPGIDNNSTSTPA  178 (255)
T ss_pred             cccccccCCCCccccceEEEEEeccccccCCCCCccCCcccccceEEEECCCCCCcCceEecccCCCCcccccCCCCCCC
Confidence            9996543  2222 4678898887766321 0111       133333211000 0    0000000111111      1


Q ss_pred             CCCeEEEEEEecCC-CceEEEEEEeCCCCCCcceEEE--eecCC--ccCCCccEEeEEeccCCccceeeeeeee
Q 041096          181 SGNVITAWIDYKND-LRMLKVFMSYSNLKPVTPLLKV--NIDLS--GYLKGNMYVGFSASTEGSTELHMIQSWS  249 (645)
Q Consensus       181 ~g~~~~~~I~Y~~~-~~~l~v~~~~~~~~~~~~~l~~--~vdl~--~~l~~~~~vGfsastg~~~~~~~i~sw~  249 (645)
                      .+-++++.|+=... ...|+|.-+..+.....+++..  .++..  .-+|+..+++|++|||...-.|.|-..+
T Consensus       179 ~~hrY~i~Ids~~~~~~~vsV~R~~~~gg~~~~~I~~~d~~~~~~q~avP~~f~lS~TgSTGgstN~HEIdnf~  252 (255)
T cd06900         179 PGHRYRITIDSTNGDNAWLSVERDIGNGGAYFVVILTFDALAEQNQDAIPENFYLSFTGSTGGSTNTHEIDNFQ  252 (255)
T ss_pred             CceEEEEEEecCCCCceEEEEEEEccCCceeEEeecceeeccccCCCCCCccEEEEEEecCCCcccceeecceE
Confidence            23456666666533 3345555553322212222211  12333  6679999999999999999999987654

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.68  E-value=1.8e-07  Score=87.28  Aligned_cols=133  Identities=17%  Similarity=0.201  Sum_probs=96.9

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEe-ccCC--------cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHS--------HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-~~~~--------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ...+|-+|+-+.|+++.+.  |+.++||. +.+.        .-..+..++|++.+.+++--.|.--.-++.+...-.|+
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            4678899999999999886  77777773 3321        11245678899999988644444333445555566899


Q ss_pred             EecCCC-CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          423 YEYMPN-GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       423 ~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      |||+++ .++.+++...-...  ..-.....++..|-+.+.-||.   ..|+|+||.++||+|..+++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~  153 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQI  153 (229)
T ss_pred             EEeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcC
Confidence            999976 47888887544321  2223336788999999999999   9999999999999998877655

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.67  E-value=6.8e-09  Score=118.03  Aligned_cols=194  Identities=24%  Similarity=0.271  Sum_probs=136.4

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      .....|...+-+-+|.++.++...-...+...+.|.....    ....+....+-.++-..+||-++...--+.-....+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            3445677777788899999988876666644444443331    122233333333333345566666555555567899


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec------
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------  494 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d------  494 (645)
                      |+++|..+++|...|+....    .+..-....+..+...++|||.   ..+.|||++|.|++...++..++.+      
T Consensus       881 L~~~~~~~~~~~Skl~~~~~----~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~  953 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSGC----LSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK  953 (1205)
T ss_pred             hhhHHhccCCchhhhhcCCC----cccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccc
Confidence            99999999999999876542    2222223345567788999998   6699999999999986665544432      


Q ss_pred             -------------------------------------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCC
Q 041096          495 -------------------------------------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRR  537 (645)
Q Consensus       495 -------------------------------------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~  537 (645)
                                                           ......||+.|++||.+.+......+|+|+.|++++|.++|..
T Consensus       954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen  954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred             cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence                                                 0122358999999999999999999999999999999999999


Q ss_pred             CCCccccc
Q 041096          538 PIERETEG  545 (645)
Q Consensus       538 P~~~~~~~  545 (645)
                      ||......
T Consensus      1034 p~na~tpq 1041 (1205)
T KOG0606|consen 1034 PFNAETPQ 1041 (1205)
T ss_pred             CCCCcchh
Confidence            99875543

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.47  E-value=2.8e-06  Score=86.65  Aligned_cols=126  Identities=12%  Similarity=0.052  Sum_probs=88.6

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCc------------chhHhHHHHHHHHhhcCCCC--eeeeeeeeee----
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH------------EGKTEFLAELSIIACLRHKN--LVQLLGWCAE----  415 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~------------~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~----  415 (645)
                      +.+-......|.+..+.  |..+.||+.....            .....+.+|...+.+|...+  ....+++...    
T Consensus        28 e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         28 EVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP  105 (268)
T ss_pred             cEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence            44444444557777764  6789999764422            11124789999988885332  3334445433    


Q ss_pred             -CCeEEEEEecCCCC-CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC
Q 041096          416 -KGELLLVYEYMPNG-SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA  486 (645)
Q Consensus       416 -~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~  486 (645)
                       ....+||+|++++. +|.+++.....  ...+...+..++.+++..+.-||.   .+|+|+|++++|||++.
T Consensus       106 ~~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        106 ATRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHL  173 (268)
T ss_pred             ccceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEec
Confidence             23578999999876 89998854221  124556777899999999999999   99999999999999985

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.46  E-value=4e-06  Score=87.27  Aligned_cols=266  Identities=16%  Similarity=0.199  Sum_probs=159.6

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeee------eeeCC-eEEEEE
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGW------CAEKG-ELLLVY  423 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~------~~~~~-~~~lV~  423 (645)
                      ..+-||+|+.+.+|-----  +. .+-|+........+  ...+..|.+. .||-+-.=+.|      .-+++ ..-++|
T Consensus        15 ~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pppa~~--aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm   89 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPPAAQ--AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM   89 (637)
T ss_pred             CCccccCCccceeeecchh--hc-hhheeecCCCchHH--HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence            3567999999999954211  12 23455554322211  1222333333 46544332222      12222 366777


Q ss_pred             ecCCCC-CHhHHhhh--cCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          424 EYMPNG-SLDRMLYQ--DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       424 Ey~~~g-sL~~~l~~--~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ..+++. ....++..  +++......|.-.++.+..+|.+.+-||+   .|.+-+|+.++|+|+.++..+.+.|.     
T Consensus        90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi  166 (637)
T COG4248          90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI  166 (637)
T ss_pred             ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceee
Confidence            777553 23333321  12223457899999999999999999999   99999999999999999988888652     


Q ss_pred             ------ccccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcC-CCCCCccccccchhhHHHHHHhhhccCc
Q 041096          496 ------FTLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACG-RRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG-~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                            +...+|...|.+||.-.     +-..+...|-|.+||++++++.| +.||.+.........-.+.   ....+.
T Consensus       167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~---~Ia~g~  243 (637)
T COG4248         167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET---DIAHGR  243 (637)
T ss_pred             ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh---hhhcce
Confidence                  22346888999999644     33457889999999999999885 9999875322111110000   000111


Q ss_pred             hhHHhh--hhcc---CCCCHH-HHHHHHHHHHHccCCC--CCCCCCHHHHHHHHcCCCCCCCCCCCCCccccc
Q 041096          564 IIEAAD--KRLN---GAFNED-EMKRLLLVGLSCANPD--SSARPSMRRVFQILNNEAEPLVVPKLKPCLTFS  628 (645)
Q Consensus       564 ~~~~~d--~~l~---~~~~~~-~~~~l~~l~~~Cl~~d--P~~RPt~~~vl~~L~~~~~~~~~p~~~~~~~~~  628 (645)
                      ....-|  ..++   ...+-. .+..+-.+-.+|+...  +.-|||++.-+..|....+.+..+..+..+.|+
T Consensus       244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H~y~  316 (637)
T COG4248         244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMHVYP  316 (637)
T ss_pred             eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhccccccc
Confidence            111111  1111   112222 2234444456676543  568999999999888887777766666655554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.35  E-value=4.2e-06  Score=78.64  Aligned_cols=124  Identities=22%  Similarity=0.285  Sum_probs=92.0

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEe-ccCCc----c----hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSH----E----GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~-~~~~~----~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ..+++|+-+.+|.+.+.  |..+++|. +.+.-    -    ....-.+|..++.+++--.|.--+-+..+.+...|+||
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            35789999999999775  44566663 33311    1    12346789999999875554444445566677889999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                      |+++..|.+.+...           +..++..+-.-+.-||.   .+|+|+||.++||+|..+. ..+.|
T Consensus        80 ~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~ID  134 (204)
T COG3642          80 YIEGELLKDALEEA-----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFID  134 (204)
T ss_pred             EeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEE
Confidence            99999999888654           24677888888999999   9999999999999998876 44434

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.19  E-value=4.3e-07  Score=100.03  Aligned_cols=139  Identities=25%  Similarity=0.340  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------------------ccccCCcccCccccc
Q 041096          454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------------------LTAGTMGYLAPEYLQ  512 (645)
Q Consensus       454 ~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------------------~~~gt~~y~APE~~~  512 (645)
                      +.+++.||.|+|.  ..++||++|.|++|.++.++..|+.....                     ...-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3456699999998  58999999999999999999999854110                     012245699999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHcc
Q 041096          513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCA  592 (645)
Q Consensus       513 ~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl  592 (645)
                      ....+.++|+||+||+++-+..|..+.-............             ...+..-...+..+.+..+.+-+...+
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-------------~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-------------RNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-------------hcccccccccccccCcHHHHHHHHHHh
Confidence            9888999999999999999996555433222211111110             001111111233555667777777889


Q ss_pred             CCCCCCCCCHHHHHH
Q 041096          593 NPDSSARPSMRRVFQ  607 (645)
Q Consensus       593 ~~dP~~RPt~~~vl~  607 (645)
                      ..++..||++.++..
T Consensus       250 ~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLS  264 (700)
T ss_pred             cCCcccCcchhhhhc
Confidence            999999998777643

>PRK09902 hypothetical protein; Provisional

Probab=98.17  E-value=4.9e-05  Score=73.91  Aligned_cols=132  Identities=20%  Similarity=0.147  Sum_probs=98.3

Q ss_pred             eeccCCceEEEEEEECCCCeEEEEEeccC----C---cchhHhHHHHHHHHhhcCC--CCeeeeeeeeeeC-----CeEE
Q 041096          355 ILGRGAFGNVYKAYFASSGSVAAVKRSKH----S---HEGKTEFLAELSIIACLRH--KNLVQLLGWCAEK-----GELL  420 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~---~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~-----~~~~  420 (645)
                      --|+||-+-|++-.+.  |..+-+|+-..    +   ......|.+|+..|.+|..  -.+.+.+ ++...     ...+
T Consensus        25 N~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~  101 (216)
T PRK09902         25 NYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL  101 (216)
T ss_pred             CcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence            3577899999998776  44688897652    1   3357789999999999963  2344444 33321     2478


Q ss_pred             EEEecCCC-CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC--eeeec
Q 041096          421 LVYEYMPN-GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--ARLES  494 (645)
Q Consensus       421 lV~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~--~kl~d  494 (645)
                      ||+|-+.+ -+|.+++.+...  ...+...+..+..+++..++-||+   .++.|+|+.+.||+++.++.  +++.|
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lID  173 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLD  173 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEE
Confidence            99997753 689988865432  135777888999999999999999   99999999999999986665  55555

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.04  E-value=7.1e-05  Score=73.54  Aligned_cols=100  Identities=22%  Similarity=0.278  Sum_probs=76.4

Q ss_pred             hHhHHHHHHHHhhcCC--CCeeeeeeeeeeC----CeEEEEEecCCCC-CHhHHhhhcCCCCccCCHHHHHHHHHHHHHH
Q 041096          388 KTEFLAELSIIACLRH--KNLVQLLGWCAEK----GELLLVYEYMPNG-SLDRMLYQDSENGVLLSWYHRLNIVVGLASA  460 (645)
Q Consensus       388 ~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~----~~~~lV~Ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~g  460 (645)
                      .....+|...+..|..  -...+.+++....    ...+||+|++++. +|.+++.....    ++......++.++++.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARL  130 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHH
Confidence            4467888888888753  3345556665543    2468999999874 89999876332    4556778899999999


Q ss_pred             HHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeec
Q 041096          461 LTYLHQECEQQVIHRDIKASNIMLDANF---NARLES  494 (645)
Q Consensus       461 L~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d  494 (645)
                      ++-||+   .+|+|+|+++.|||++.+.   ...+.|
T Consensus       131 i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lID  164 (206)
T PF06293_consen  131 IAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLID  164 (206)
T ss_pred             HHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEc
Confidence            999999   9999999999999999886   444555

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.02  E-value=4e-05  Score=73.81  Aligned_cols=118  Identities=19%  Similarity=0.242  Sum_probs=73.4

Q ss_pred             EEEEEEECCCCeEEEEEeccCCc--------------c-------------hhHhHHHHHHHHhhcCCC--Ceeeeeeee
Q 041096          363 NVYKAYFASSGSVAAVKRSKHSH--------------E-------------GKTEFLAELSIIACLRHK--NLVQLLGWC  413 (645)
Q Consensus       363 ~Vy~g~~~~~~~~vavK~~~~~~--------------~-------------~~~~~~~Ei~~l~~l~H~--niv~l~g~~  413 (645)
                      .||.|...+ +..+|+|..+...              .             ......+|.+.|.++...  ++.+.+.+.
T Consensus         1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            489998754 7899999654310              0             123467799999999765  456665443


Q ss_pred             eeCCeEEEEEecCC--CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHH-hhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          414 AEKGELLLVYEYMP--NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL-HQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       414 ~~~~~~~lV~Ey~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                          .-.|||||++  +..+..+....      +.......++.+++..+..+ |.   .+++|+||.+.||+++.+ .+
T Consensus        80 ----~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~  145 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KV  145 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CE
T ss_pred             ----CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eE
Confidence                2379999998  54554433221      11233456777787766664 66   899999999999999988 67


Q ss_pred             eeecc
Q 041096          491 RLESS  495 (645)
Q Consensus       491 kl~d~  495 (645)
                      .+.|.
T Consensus       146 ~iIDf  150 (188)
T PF01163_consen  146 YIIDF  150 (188)
T ss_dssp             EE--G
T ss_pred             EEEec
Confidence            77674

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.00  E-value=3.7e-05  Score=76.61  Aligned_cols=128  Identities=17%  Similarity=0.201  Sum_probs=87.9

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCC-----------------------cchhHhHHHHHHHHhhcCCC--C
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----------------------HEGKTEFLAELSIIACLRHK--N  405 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----------------------~~~~~~~~~Ei~~l~~l~H~--n  405 (645)
                      ...+.||-|.-+.||.|..+. |..+|||.-+..                       ...+....+|.+.|.+|.-.  .
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             hhccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            345789999999999999874 788999942210                       01123467899999998644  6


Q ss_pred             eeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       406 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      +.+-++|-    .-.+||||+.+--|...--         +....-.|+..|+.-+.-+-.   .+++|+|+.+-||+++
T Consensus       173 VP~P~~~n----RHaVvMe~ieG~eL~~~r~---------~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~  236 (304)
T COG0478         173 VPKPIAWN----RHAVVMEYIEGVELYRLRL---------DVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVT  236 (304)
T ss_pred             CCCccccc----cceeeeehcccceeecccC---------cccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEe
Confidence            66666554    3479999998866554321         112222334444444444444   8999999999999999


Q ss_pred             CCCCeeeecc
Q 041096          486 ANFNARLESS  495 (645)
Q Consensus       486 ~~~~~kl~d~  495 (645)
                      +|+...+.|-
T Consensus       237 ~dg~~~vIDw  246 (304)
T COG0478         237 EDGDIVVIDW  246 (304)
T ss_pred             cCCCEEEEeC
Confidence            9999998774

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.79  E-value=0.00031  Score=70.01  Aligned_cols=72  Identities=17%  Similarity=0.165  Sum_probs=53.0

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      ..||+|..+.||+..    +..+++|...... ......+|.+++..+..-.  +.+.++++...+...+|||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEec----CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            468999999999841    3456788776522 3445688999999886433  4667777777778889999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.69  E-value=0.00015  Score=70.05  Aligned_cols=96  Identities=24%  Similarity=0.276  Sum_probs=77.8

Q ss_pred             HHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEEecCCCCCHhHH---hhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhc
Q 041096          392 LAELSIIACLRH-KNLVQLLGWCAEKGELLLVYEYMPNGSLDRM---LYQDSENGVLLSWYHRLNIVVGLASALTYLHQE  467 (645)
Q Consensus       392 ~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~---l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~  467 (645)
                      ..|.-+++.+++ +++.+++|+|-+    ++|.||...+++...   +.+..    ..+|..|.+|+.++++.+.+|++.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~----~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFL----QSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccccccc----ccCHHHHHHHHHHHHHHHHHHhcC
Confidence            357888888976 699999999954    679999987766432   11111    268999999999999999999986


Q ss_pred             CCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          468 CEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       468 ~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      ....+.-.|++++|+-+++++..|+.|.
T Consensus        79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDl  106 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNFGVNDDGRLKLIDL  106 (188)
T ss_pred             CCCcEEEeecchHHeEEeCCCcEEEEec
Confidence            5556888999999999999999999873

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.65  E-value=5.8e-06  Score=90.27  Aligned_cols=176  Identities=19%  Similarity=0.135  Sum_probs=121.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC-eeeeeeeeeeCCeEEEEEecCCC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN-LVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +..-+-+++|+.+++||.+.......+ .+.+...    ....-++++|.+++||| .+..++-+..++..+++++++..
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~  318 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICST  318 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcC
Confidence            333455789999999998765433332 4433322    44567889999999999 77777777777889999999977


Q ss_pred             C-CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec-----------cc
Q 041096          429 G-SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----------SF  496 (645)
Q Consensus       429 g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d-----------~~  496 (645)
                      + +-..-....   ...+...+...+...-.+++++||+   ..-+|||    ||+..++. .+..+           ..
T Consensus       319 ~rs~~~~~~~s---e~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~~~-~~~~~~~v~~~L~~~~~~  387 (829)
T KOG0576|consen  319 GRSSALEMTVS---EIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSEEE-VKLLDFAVPPQLTRTMKP  387 (829)
T ss_pred             CccccccCChh---hHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccccc-cccccccCCcccCccccc
Confidence            6 211111100   1114444555667777889999998   4568998    77776532 22212           13


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIER  541 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~  541 (645)
                      ....+++.|+|||+.....+..+.|+|+.|+-..++.-|-.|-..
T Consensus       388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            345689999999999999999999999999988888888776543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.52  E-value=0.0011  Score=64.90  Aligned_cols=132  Identities=13%  Similarity=0.178  Sum_probs=86.0

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-hhH---------hHHHHHHHHhhcCC---CCeeeeeee
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-GKT---------EFLAELSIIACLRH---KNLVQLLGW  412 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-~~~---------~~~~Ei~~l~~l~H---~niv~l~g~  412 (645)
                      ..++|...+++-......|.+-...  +..+++|..+.... ..+         +..+++..+.+++.   -....++..
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            3467888888888777777776654  78889997765221 111         12344444444432   223332322


Q ss_pred             ee-----eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC
Q 041096          413 CA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       413 ~~-----~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~  487 (645)
                      ..     -....+|+|||++|..|.++..        ++.    .++..+.+++.-||+   .|++|+|..|.|++++.+
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~  171 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN  171 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC
Confidence            22     2235679999999988876542        221    245667788999999   999999999999999966


Q ss_pred             CCeeeecc
Q 041096          488 FNARLESS  495 (645)
Q Consensus       488 ~~~kl~d~  495 (645)
                      + .++.|.
T Consensus       172 ~-i~iID~  178 (229)
T PF06176_consen  172 G-IRIIDT  178 (229)
T ss_pred             c-EEEEEC
Confidence            5 556563

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.47  E-value=0.00087  Score=66.36  Aligned_cols=77  Identities=21%  Similarity=0.320  Sum_probs=56.7

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCC--Ceeeeeeeeee---CCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK--NLVQLLGWCAE---KGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~~~~---~~~~~lV~Ey~~~  428 (645)
                      +.|+.|..+.||+....+  ..+++|..... .......+|..++..+...  .+.+++.++..   ....+++|+++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            568999999999999875  47888987654 4566788899998888533  34566664432   3357999999999


Q ss_pred             CCHhH
Q 041096          429 GSLDR  433 (645)
Q Consensus       429 gsL~~  433 (645)
                      ..+..
T Consensus        80 ~~~~~   84 (239)
T PF01636_consen   80 RPLDD   84 (239)
T ss_dssp             EEHHH
T ss_pred             ccccc
Confidence            88877

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PLN02876 acyl-CoA dehydrogenase

Probab=97.46  E-value=0.0015  Score=77.59  Aligned_cols=79  Identities=13%  Similarity=0.321  Sum_probs=57.7

Q ss_pred             CceeccCCceEEEEEEECCCC--eEEEEEeccCCc--chhHhHHHHHHHHhhcC-CCCe--eeeeeeeeeC---CeEEEE
Q 041096          353 NRILGRGAFGNVYKAYFASSG--SVAAVKRSKHSH--EGKTEFLAELSIIACLR-HKNL--VQLLGWCAEK---GELLLV  422 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~--~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV  422 (645)
                      .+.++.|.+..+|+.....++  ..+++|+.....  .....+.+|.++++.+. |.++  .+++++|.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            456889999999998776432  356777654422  23456889999999995 6665  7888888764   467899


Q ss_pred             EecCCCCCH
Q 041096          423 YEYMPNGSL  431 (645)
Q Consensus       423 ~Ey~~~gsL  431 (645)
                      |||+++..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999987653

>PRK10593 hypothetical protein; Provisional

Probab=97.45  E-value=0.0023  Score=66.65  Aligned_cols=77  Identities=12%  Similarity=0.143  Sum_probs=56.3

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC---CCeeeeeeeeeeC---CeEEEEEec
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH---KNLVQLLGWCAEK---GELLLVYEY  425 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H---~niv~l~g~~~~~---~~~~lV~Ey  425 (645)
                      ..+.||.|..+.||+-...+ + .+.+|..+. ......+..|.+.|+.|.-   -.+.+++++|...   +..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQ-G-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCC-C-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            34569999999999987643 3 456666432 2234578999999998853   3678888887643   568999999


Q ss_pred             CCCCCH
Q 041096          426 MPNGSL  431 (645)
Q Consensus       426 ~~~gsL  431 (645)
                      ++++++
T Consensus        95 i~G~~~  100 (297)
T PRK10593         95 LRGVSV  100 (297)
T ss_pred             cCCEec
Confidence            998765

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.43  E-value=0.0015  Score=65.72  Aligned_cols=75  Identities=13%  Similarity=0.163  Sum_probs=53.6

Q ss_pred             eccCCc-eEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCCCCCHhH
Q 041096          356 LGRGAF-GNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDR  433 (645)
Q Consensus       356 lG~G~f-g~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~  433 (645)
                      |-.|.. ..||+....  +..+.+|+.....  .....+|+++++.+. +--+.+++++....+..++|||+++|.+|..
T Consensus         6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            444555 789998764  4677888775532  345778999988884 4445577777776667899999999988764


Q ss_pred             H
Q 041096          434 M  434 (645)
Q Consensus       434 ~  434 (645)
                      .
T Consensus        82 ~   82 (244)
T cd05150          82 L   82 (244)
T ss_pred             h
Confidence            4

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.43  E-value=0.002  Score=62.66  Aligned_cols=122  Identities=17%  Similarity=0.231  Sum_probs=86.0

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEeccCCc-----------------chhHhHHHHHHHHhhcC------CCCeee
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-----------------EGKTEFLAELSIIACLR------HKNLVQ  408 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-----------------~~~~~~~~Ei~~l~~l~------H~niv~  408 (645)
                      ....||+|+.-.||.--.   .....||+.....                 ...++..+|+.....+.      +.+|.+
T Consensus         5 ~~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            356799999999996433   3345667665533                 23466777877766666      889999


Q ss_pred             eeeeeeeCCeEEEEEecCCC------CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 041096          409 LLGWCAEKGELLLVYEYMPN------GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI  482 (645)
Q Consensus       409 l~g~~~~~~~~~lV~Ey~~~------gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  482 (645)
                      ++|+.+++.-.-+|+|.+.+      -+|.+++.+..     ++. ...   ..+-+-..||-+   ..|+.+|++|.||
T Consensus        82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-----~~~-~~~---~~L~~f~~~l~~---~~Iv~~dl~~~NI  149 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-----LTE-ELR---QALDEFKRYLLD---HHIVIRDLNPHNI  149 (199)
T ss_pred             EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-----ccH-HHH---HHHHHHHHHHHH---cCCeecCCCcccE
Confidence            99999999888999998643      36888885433     444 333   333344566666   8999999999999


Q ss_pred             EEcCCC
Q 041096          483 MLDANF  488 (645)
Q Consensus       483 lld~~~  488 (645)
                      ++....
T Consensus       150 v~~~~~  155 (199)
T PF10707_consen  150 VVQRRD  155 (199)
T ss_pred             EEEecC
Confidence            996543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.34  E-value=0.00065  Score=75.31  Aligned_cols=131  Identities=18%  Similarity=0.174  Sum_probs=80.1

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcch-----------------------------------------hHhHH
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG-----------------------------------------KTEFL  392 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~  392 (645)
                      +-|+.++-|.||+|++++ |+.||||+....-..                                         +-++.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            568999999999999986 899999976542100                                         00133


Q ss_pred             HHHHHHhhcC----CCCeeeeeeeeee-CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHH-HHHHhh
Q 041096          393 AELSIIACLR----HKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA-LTYLHQ  466 (645)
Q Consensus       393 ~Ei~~l~~l~----H~niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~  466 (645)
                      .|..-+.+++    ...-+.+=..|++ .....|+|||++|-.+.+...-....   .+-.   .++..++++ +..+-.
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d~k---~ia~~~~~~f~~q~~~  283 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---IDRK---ELAELLVRAFLRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CCHH---HHHHHHHHHHHHHHHh
Confidence            3444444432    2222222223332 45678999999999998884332221   3422   233333322 222222


Q ss_pred             cCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          467 ECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       467 ~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                         .++.|.|..|.||+++.++..-+-|
T Consensus       284 ---dgffHaDpHpGNi~v~~~g~i~~lD  308 (517)
T COG0661         284 ---DGFFHADPHPGNILVRSDGRIVLLD  308 (517)
T ss_pred             ---cCccccCCCccceEEecCCcEEEEc
Confidence               6899999999999999997766655

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.12  E-value=0.0055  Score=61.22  Aligned_cols=75  Identities=19%  Similarity=0.210  Sum_probs=48.0

Q ss_pred             ceeccCCceEEEEEEECC-CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC-eeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          354 RILGRGAFGNVYKAYFAS-SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN-LVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      +.|..|-...+|+....+ .+..+++|+.........+..+|+.++..+.... ..++++.+. +   .+||||+++.++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~G~~l   79 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIPGRTL   79 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeCCCcC
Confidence            457778888999987653 2467788876543322233457888888885333 344444332 1   479999988776


Q ss_pred             h
Q 041096          432 D  432 (645)
Q Consensus       432 ~  432 (645)
                      .
T Consensus        80 ~   80 (235)
T cd05157          80 E   80 (235)
T ss_pred             C
Confidence            3

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.00  E-value=0.0052  Score=61.56  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=46.0

Q ss_pred             ceeccCCce-EEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCC---CeeeeeeeeeeC---CeEEEEEecC
Q 041096          354 RILGRGAFG-NVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK---NLVQLLGWCAEK---GELLLVYEYM  426 (645)
Q Consensus       354 ~~lG~G~fg-~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~---~~~~lV~Ey~  426 (645)
                      +.|+.|+.. .||+.     +..+++|.... ......+.+|.+.+..+...   .+.+.++.+...   ...+++||++
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            457777766 48875     23466776554 33455788999999888532   334444444332   2358899999


Q ss_pred             CCCCHh
Q 041096          427 PNGSLD  432 (645)
Q Consensus       427 ~~gsL~  432 (645)
                      +|.++.
T Consensus        77 ~G~~l~   82 (235)
T cd05155          77 EGETAT   82 (235)
T ss_pred             cCCCCC
Confidence            987764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.91  E-value=0.012  Score=58.46  Aligned_cols=146  Identities=18%  Similarity=0.159  Sum_probs=87.3

Q ss_pred             cCHHHHHHHhcCCCcCce---eccCCceEEEEEEECCCCeEEEEEeccCCcchh-------------------------H
Q 041096          338 FSYRELRSATRGFHSNRI---LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-------------------------T  389 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~---lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~-------------------------~  389 (645)
                      .+++.|....++..+..+   |.+|.-+.||+|... ++..+|+|++.......                         .
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            455666666666655555   456777889999764 47889999876522111                         0


Q ss_pred             hHHHHHHHHhhcC--CCCeeeeeeeeeeCCeEEEEEecCCCCCH-hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhh
Q 041096          390 EFLAELSIIACLR--HKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ  466 (645)
Q Consensus       390 ~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gsL-~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~  466 (645)
                      ...+|..-|.++.  +-.+.+-+++.    +-.|||||+....+ .-.|..     ..+...+...+..++.+.|.-|-.
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-----v~~e~~e~~~~~~~~v~~~~~l~~  184 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-----VPLELEEAEGLYEDVVEYMRRLYK  184 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc-----CCcCchhHHHHHHHHHHHHHHHHH
Confidence            1233444444442  22222222222    34799999854311 111111     112333566677788888887775


Q ss_pred             cCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          467 ECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       467 ~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                        ..++||+||..-|||+. ++.+-+.|..
T Consensus       185 --~a~LVHgDLSEyNiL~~-~~~p~iID~~  211 (268)
T COG1718         185 --EAGLVHGDLSEYNILVH-DGEPYIIDVS  211 (268)
T ss_pred             --hcCcccccchhhheEEE-CCeEEEEECc
Confidence              37899999999999999 6777776743

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.88  E-value=0.011  Score=57.28  Aligned_cols=122  Identities=21%  Similarity=0.326  Sum_probs=86.8

Q ss_pred             CcccCHHHHHHHhcCCCcCceeccCCc-eEEEEEEECCCCeEEEEEeccC-----C--------c---------chhHhH
Q 041096          335 PREFSYRELRSATRGFHSNRILGRGAF-GNVYKAYFASSGSVAAVKRSKH-----S--------H---------EGKTEF  391 (645)
Q Consensus       335 ~~~~~~~~l~~~~~~f~~~~~lG~G~f-g~Vy~g~~~~~~~~vavK~~~~-----~--------~---------~~~~~~  391 (645)
                      ...|+..     +..++..+.||.|.. |.||++...  |..+|+|.+..     .        .         .....|
T Consensus        29 L~~F~~h-----~~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF  101 (207)
T PF13095_consen   29 LEPFTHH-----GDDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPF  101 (207)
T ss_pred             cCCcCCC-----CCcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChH
Confidence            3456652     277888999999999 999999987  78999998322     0        0         112358


Q ss_pred             HHHHHHHhhcC---CCCe--eeeeeeeeeC------------------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHH
Q 041096          392 LAELSIIACLR---HKNL--VQLLGWCAEK------------------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWY  448 (645)
Q Consensus       392 ~~Ei~~l~~l~---H~ni--v~l~g~~~~~------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~  448 (645)
                      ..|.+...+|+   +.++  |+++||..-.                  ...-||.||++...             .+.  
T Consensus       102 ~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~--  166 (207)
T PF13095_consen  102 NCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQ--  166 (207)
T ss_pred             HHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccc--
Confidence            88999888885   4566  9999997322                  02467888775433             022  


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       449 ~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                        .+-+.++.+-|..+|.   .+|+-+|+|+.|..
T Consensus       167 --~~~~~~~~~dl~~~~k---~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  167 --IRDIPQMLRDLKILHK---LGIVPRDVKPRNYR  196 (207)
T ss_pred             --hhHHHHHHHHHHHHHH---CCeeeccCcccccc
Confidence              2335677788889998   99999999999964

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.75  E-value=0.021  Score=61.61  Aligned_cols=75  Identities=13%  Similarity=0.108  Sum_probs=52.6

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCC--------cchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEEEE
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS--------HEGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--------~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV  422 (645)
                      +.||.|.+..||+....+++..++||.....        ......+..|.+.|..+.   -.++.+++.+..  +..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence            4689999999999998764468899974320        123445677888887763   245677776643  457899


Q ss_pred             EecCCCCC
Q 041096          423 YEYMPNGS  430 (645)
Q Consensus       423 ~Ey~~~gs  430 (645)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998643

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.72  E-value=0.0099  Score=60.35  Aligned_cols=71  Identities=13%  Similarity=0.122  Sum_probs=45.7

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCCcchh-HhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEecCCCCCHh
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEYMPNGSLD  432 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~-~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gsL~  432 (645)
                      +..|-...+|+...  ++..+++|......... -...+|.++++.+....+ .++++.+.    -++||||++|..+.
T Consensus         4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~   76 (256)
T TIGR02721         4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT   76 (256)
T ss_pred             CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence            45677788998874  36678888765432221 246788889888864333 33444332    36899999987654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.71  E-value=0.0053  Score=72.17  Aligned_cols=185  Identities=20%  Similarity=0.135  Sum_probs=118.7

Q ss_pred             HHHHHHHHhhcCCCCeeeeeeeeeeCCeE----EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhh
Q 041096          391 FLAELSIIACLRHKNLVQLLGWCAEKGEL----LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ  466 (645)
Q Consensus       391 ~~~Ei~~l~~l~H~niv~l~g~~~~~~~~----~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~  466 (645)
                      -.-|++.+.+++|+|++.+++|..++...    .+..|++..-++...+..-..    .+....+.+..+..+||+|+|+
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~----i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS----IPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc----cCHHHHHHHHHHHhhhHHHHHH
Confidence            44567778889999999999997765432    345578888888887765443    7788888899999999999998


Q ss_pred             cCCCCeeeCCCCCC---cEEEcCCCCeeee--cc-----------ccccccCCcccCcccccCCCCCc--chhHHHHHHH
Q 041096          467 ECEQQVIHRDIKAS---NIMLDANFNARLE--SS-----------FTLTAGTMGYLAPEYLQYGTATE--KTDVFSYGVV  528 (645)
Q Consensus       467 ~~~~~ivHrDlkp~---NIlld~~~~~kl~--d~-----------~~~~~gt~~y~APE~~~~~~~t~--ksDV~SfGvv  528 (645)
                         ....|.-|..+   +--.+.++...++  +.           .....-+..|.|||......+..  ..|+|.+|..
T Consensus       305 ---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll  381 (1351)
T KOG1035|consen  305 ---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLL  381 (1351)
T ss_pred             ---hccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHH
Confidence               54444444333   2223333333332  10           00112244577777776655544  4799999999


Q ss_pred             HHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          529 VLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       529 l~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      +..+..|..+-.....                       +..-+.....    ..+......|+..++++|++..+++..
T Consensus       382 ~~~~~~~~~i~~~~~~-----------------------~~~~l~~~~~----~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  382 LLQLSQGEDISEKSAV-----------------------PVSLLDVLST----SELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             HhhhhhcCcccccccc-----------------------hhhhhccccc----hhhhhhhhhhcchhhhhccchhhhhhc
Confidence            9999987765322110                       0000100111    134455578999999999999999875


Q ss_pred             H
Q 041096          609 L  609 (645)
Q Consensus       609 L  609 (645)
                      .
T Consensus       435 ~  435 (1351)
T KOG1035|consen  435 P  435 (1351)
T ss_pred             h
Confidence            3

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.37  E-value=0.018  Score=59.77  Aligned_cols=139  Identities=17%  Similarity=0.151  Sum_probs=80.3

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eeeeeeee------eeCCeEEEEEe
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQLLGWC------AEKGELLLVYE  424 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~------~~~~~~~lV~E  424 (645)
                      .+.|..|....+|+....  +..+++|+...  ........|++++..|.+..  +.+.+...      ...+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            345777777889998664  34678888764  33456777888888885432  44444321      22345689999


Q ss_pred             cCCCCCHhH----H----------hhhcCC-------CCccCCHHHHHH----------HHHHHHHHHHHHhh----cCC
Q 041096          425 YMPNGSLDR----M----------LYQDSE-------NGVLLSWYHRLN----------IVVGLASALTYLHQ----ECE  469 (645)
Q Consensus       425 y~~~gsL~~----~----------l~~~~~-------~~~~l~~~~~~~----------i~~~ia~gL~yLH~----~~~  469 (645)
                      |++|..+..    .          ++....       ......|.....          ....+...+.++.+    ...
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            998876532    1          111100       001123332211          11123344445443    124


Q ss_pred             CCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          470 QQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       470 ~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      .+++|+|+.|.||+++.+....+.|.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDf  200 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDF  200 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeeh
Confidence            57999999999999998765556563

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.35  E-value=0.029  Score=62.30  Aligned_cols=125  Identities=18%  Similarity=0.199  Sum_probs=74.0

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcch--------------------------------------hHhHHHHH
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--------------------------------------KTEFLAEL  395 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~Ei  395 (645)
                      +-||.-+.|.||+|++++ |+.||||+-+..-+.                                      +-+|..|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            568999999999999987 999999965542110                                      01233343


Q ss_pred             HHHhh----cCCCC---eeeeeeeeee-CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhc
Q 041096          396 SIIAC----LRHKN---LVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE  467 (645)
Q Consensus       396 ~~l~~----l~H~n---iv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~  467 (645)
                      +=..+    ++|-+   =|.+=..+++ .....|+||||+|..+.+.-.-....   ++......-+.++..-+-+    
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~qIf----  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLEQIF----  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHHHHH----
Confidence            32222    23444   1112222222 24679999999998776653322221   4444443333333222222    


Q ss_pred             CCCCeeeCCCCCCcEEEcCC
Q 041096          468 CEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       468 ~~~~ivHrDlkp~NIlld~~  487 (645)
                       ..|++|+|-.|.||+++.+
T Consensus       319 -~~GffHaDPHPGNilv~~~  337 (538)
T KOG1235|consen  319 -KTGFFHADPHPGNILVRPN  337 (538)
T ss_pred             -hcCCccCCCCCCcEEEecC
Confidence             2689999999999999953

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.30  E-value=0.026  Score=58.69  Aligned_cols=76  Identities=22%  Similarity=0.265  Sum_probs=49.3

Q ss_pred             ceeccCCceEEEEEEECC------CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEecC
Q 041096          354 RILGRGAFGNVYKAYFAS------SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~------~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +.|..|-.-.+|+.....      .+..+++|+.........+..+|.+++..+....+ .++++++..    .+|+||+
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i   79 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI   79 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence            345556667899887653      24778899876644444566788888888853333 345555532    3589999


Q ss_pred             CCCCHhH
Q 041096          427 PNGSLDR  433 (645)
Q Consensus       427 ~~gsL~~  433 (645)
                      +|..+..
T Consensus        80 ~G~~l~~   86 (302)
T cd05156          80 PSRTLTT   86 (302)
T ss_pred             CCCcCCH
Confidence            8877643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.28  E-value=0.026  Score=53.19  Aligned_cols=122  Identities=14%  Similarity=0.249  Sum_probs=78.4

Q ss_pred             cCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeee-eeeeeeeCCeEEEEEecCCCCC
Q 041096          352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQ-LLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       352 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~-l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      ..+.|++|.+|.||+|.+.  +..+|+|.-.. +..+..+..|+++|..++-.++.. ++.|..    -.+.|||+.|-.
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~   98 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcc
Confidence            3467999999999999987  56888886544 445678999999999987655543 333332    245599998878


Q ss_pred             HhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC--CcEEEcCCCCeeeecc
Q 041096          431 LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKA--SNIMLDANFNARLESS  495 (645)
Q Consensus       431 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp--~NIlld~~~~~kl~d~  495 (645)
                      |.+.-...       +-.+    ...+++.---|-.   .+|-|+.|.-  .||++..+ .+-|.|.
T Consensus        99 L~~~~~~~-------~rk~----l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~-~~~iIDF  150 (201)
T COG2112          99 LGKLEIGG-------DRKH----LLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDR-DVYIIDF  150 (201)
T ss_pred             hhhhhhcc-------cHHH----HHHHHHHHHHHHH---hccchhhhcCCceeEEecCC-cEEEEEc
Confidence            87655321       1222    3344444333333   7888888753  45555443 5666563

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.25  E-value=0.0077  Score=65.18  Aligned_cols=162  Identities=23%  Similarity=0.323  Sum_probs=92.2

Q ss_pred             HhHHHHHHHHhhcCCCCeeeeeeeeeeC-CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhc
Q 041096          389 TEFLAELSIIACLRHKNLVQLLGWCAEK-GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE  467 (645)
Q Consensus       389 ~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~  467 (645)
                      ....-...+++.++|+|+...+.+.... ....+|+|++ +.||++++..+..     .      .....+         
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l-----~------~~s~~~---------   85 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNL-----K------DESLLA---------   85 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhccc-----c------hhhhcc---------
Confidence            4566677888999999999998877654 3578899998 7899998865431     1      111111         


Q ss_pred             CCCCeeeCCCCCCcEEEcCCCCeeeeccccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc
Q 041096          468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK  547 (645)
Q Consensus       468 ~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~  547 (645)
                        +++.|-     ||+...+   ...+.         |  |-     ...+|+||||+|.++.|++-|..-+......  
T Consensus        86 --~~~~~~-----~~~~~td---~~~t~---------~--~~-----~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s--  137 (725)
T KOG1093|consen   86 --HGVLHL-----NIIYITD---HFLTK---------Y--PS-----PIGPKSDVWSLGFIILELYLGISLEAELTES--  137 (725)
T ss_pred             --ccccee-----hhhhccc---ccccc---------C--CC-----CCCcchhhhhHHHHHHHHHHhhHHHHHHHHH--
Confidence              222221     2222111   00000         1  11     1114999999999999999988665443221  


Q ss_pred             hhhHHHHHHhhhc-cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          548 MVNLVDWVWGLYA-EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       548 ~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                        ........... ++.........   .+..++.+..+++...|.-..|..||...+
T Consensus       138 --~~l~~i~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  138 --EYLEILLKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             --HHHHHHHHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCccccccccchhH
Confidence              11111111111 11111111111   223455667888889999999999986433

>PRK05231 homoserine kinase; Provisional

Probab=95.65  E-value=0.12  Score=54.09  Aligned_cols=90  Identities=9%  Similarity=0.033  Sum_probs=50.9

Q ss_pred             cCHHHHHHHhcCCCc-----CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eeeee
Q 041096          338 FSYRELRSATRGFHS-----NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQLL  410 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~  410 (645)
                      .+.+++......|..     .+.|+.|....+|+....+ + .+++|+...  ........|+.++..|....  +.+.+
T Consensus         7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~-g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~glpvP~~i   82 (319)
T PRK05231          7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQ-G-EYVLTLFER--LTAEDLPFFLGLMQHLAARGVPVPAPV   82 (319)
T ss_pred             CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCC-C-cEEEEEecc--CChHHhHHHHHHHHHHHHCCCCCCcce
Confidence            344555554455543     2446667777899987653 3 678887752  22334445566666653222  22333


Q ss_pred             ee------eeeCCeEEEEEecCCCCCH
Q 041096          411 GW------CAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       411 g~------~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ..      ....+..++++||++|..+
T Consensus        83 ~~~~G~~~~~~~g~~~~l~~~l~G~~~  109 (319)
T PRK05231         83 ARRDGAALGELAGKPAAIVTFLEGKWP  109 (319)
T ss_pred             eCCCCCEeeeeCCEEEEEEEecCCCCC
Confidence            21      1224567999999988753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.58  E-value=0.21  Score=52.19  Aligned_cols=152  Identities=16%  Similarity=0.178  Sum_probs=82.5

Q ss_pred             HHHHHHHhcCCCc-----CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCC--Ceeeeeee
Q 041096          340 YRELRSATRGFHS-----NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK--NLVQLLGW  412 (645)
Q Consensus       340 ~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~  412 (645)
                      .++|....+.|..     .+.++.|....+|+....  +..+++|+..... ...+...|++++..|...  .+.+.+..
T Consensus         9 ~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~--~~~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t   85 (307)
T TIGR00938         9 DEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTD--VGRYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKS   85 (307)
T ss_pred             HHHHHHHHHhcCCCCceeccccCCccccceEEEEeC--CCcEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccC
Confidence            3455444444533     345666766789988654  3357788765422 233455677777777432  23444432


Q ss_pred             e------eeCCeEEEEEecCCCCCHhH-----------H---hhhcCCC----C----ccCCHHHHHH------------
Q 041096          413 C------AEKGELLLVYEYMPNGSLDR-----------M---LYQDSEN----G----VLLSWYHRLN------------  452 (645)
Q Consensus       413 ~------~~~~~~~lV~Ey~~~gsL~~-----------~---l~~~~~~----~----~~l~~~~~~~------------  452 (645)
                      .      ...+..++++||++|..+..           .   ++.....    .    ..-.|.....            
T Consensus        86 ~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~  165 (307)
T TIGR00938        86 RDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAH  165 (307)
T ss_pred             CCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHH
Confidence            2      12356789999998855321           1   1111100    0    0112221110            


Q ss_pred             HHHHHHHHHHHHhh----cCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          453 IVVGLASALTYLHQ----ECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       453 i~~~ia~gL~yLH~----~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                      ....+.+.++++..    ....+++|+|+.+.||+++.+....+.|
T Consensus       166 ~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vID  211 (307)
T TIGR00938       166 MGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVID  211 (307)
T ss_pred             HHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEee
Confidence            11223344555542    2357899999999999999876555656

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.55  E-value=0.11  Score=53.67  Aligned_cols=73  Identities=18%  Similarity=0.348  Sum_probs=48.4

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      .+.++.|....+|+..  .++..+.||.-.  ......|..|.+-|+.|.   --.+.+.+++....+..+||+||++.+
T Consensus        22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            4568889999999987  457788999776  344567889999988884   345778888887777779999999776

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.31  E-value=0.0042  Score=74.58  Aligned_cols=152  Identities=13%  Similarity=0.012  Sum_probs=109.6

Q ss_pred             HhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhh
Q 041096          389 TEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ  466 (645)
Q Consensus       389 ~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~  466 (645)
                      +....|...++...|+++.....-...  ..+.+..++|+..|.+...+-+..+....+...-......+...+..-+|+
T Consensus      1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence            334455556667789988776554332  346789999999999999998776655445444333333333444444444


Q ss_pred             c--CCCCeeeCCCCCCcEEEcCCCCeeeec------------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHH
Q 041096          467 E--CEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV  532 (645)
Q Consensus       467 ~--~~~~ivHrDlkp~NIlld~~~~~kl~d------------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El  532 (645)
                      .  ...-.+|++||+-|.+|..+.++++++            ..+...+++.|+.|+....-+++.++|+|..|+.+++.
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred             cccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            2  234478999999999999998777755            33445678899999999988999999999999999999


Q ss_pred             HcCCCCCC
Q 041096          533 ACGRRPIE  540 (645)
Q Consensus       533 ~tG~~P~~  540 (645)
                      .-|..+|-
T Consensus      1434 s~~n~~fi 1441 (2724)
T KOG1826|consen 1434 SDGNAYFI 1441 (2724)
T ss_pred             hcccHHHH
Confidence            88877653

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.03  E-value=0.45  Score=51.40  Aligned_cols=79  Identities=14%  Similarity=0.126  Sum_probs=51.3

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccC-----Cc---chhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEEE
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKH-----SH---EGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-----~~---~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~l  421 (645)
                      .+.||.|..-.||+....  +..++||.-..     ..   .....-..|.+.|+.+.   -.++.+++.+|.+  ..++
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vl  112 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALI  112 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEE
Confidence            456899999999998764  44688887552     11   12223334456665553   3578888988884  4678


Q ss_pred             EEecCCC--CCHhHHh
Q 041096          422 VYEYMPN--GSLDRML  435 (645)
Q Consensus       422 V~Ey~~~--gsL~~~l  435 (645)
                      +|||+++  ..+++.|
T Consensus       113 vME~L~~~~~ilr~~L  128 (418)
T PLN02756        113 GMRYLEPPHIILRKGL  128 (418)
T ss_pred             EEeecCCcceehhhhh
Confidence            9999976  3455544

>PLN02236 choline kinase

Probab=94.82  E-value=0.22  Score=52.96  Aligned_cols=74  Identities=18%  Similarity=0.205  Sum_probs=46.3

Q ss_pred             eeccCCceEEEEEEECC----CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCee-eeeeeeeeCCeEEEEEecCCCC
Q 041096          355 ILGRGAFGNVYKAYFAS----SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV-QLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~----~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      .|-.|-.-.+|+.....    .+..+++|+........-+..+|..++..+...++. ++++.+..+    .|+||+++.
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~  118 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHAR  118 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCC
Confidence            34446667888887542    236788888766433333346788888888644333 445555332    589999877


Q ss_pred             CHh
Q 041096          430 SLD  432 (645)
Q Consensus       430 sL~  432 (645)
                      +|.
T Consensus       119 ~l~  121 (344)
T PLN02236        119 TLS  121 (344)
T ss_pred             CCC
Confidence            764

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.17  E-value=0.42  Score=46.80  Aligned_cols=151  Identities=17%  Similarity=0.188  Sum_probs=93.9

Q ss_pred             CceEEEEEEECCCCeEEEEEeccC-Ccc-hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhh
Q 041096          360 AFGNVYKAYFASSGSVAAVKRSKH-SHE-GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ  437 (645)
Q Consensus       360 ~fg~Vy~g~~~~~~~~vavK~~~~-~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  437 (645)
                      +..+.-.|..+- | +..+|++.. .-+ ...-|..+.++++++.  .|++|..  .+.-..-++.|+|-..        
T Consensus        74 gNsTl~~~kt~i-G-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~--------  139 (308)
T PF07387_consen   74 GNSTLLIGKTKI-G-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKI--------  139 (308)
T ss_pred             CceEEEEecccc-c-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCc--------
Confidence            344444444332 2 334555554 333 3556788888888774  4555552  1334567899988321        


Q ss_pred             cCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccccccCCcccCcccccCCCCC
Q 041096          438 DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTAT  517 (645)
Q Consensus       438 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt~~y~APE~~~~~~~t  517 (645)
                              .....-.|..+ .+.|.-.|++ ..+.+|+|-.|+|||=|..+..|+-|.......+..|.--|+   ...|
T Consensus       140 --------~i~~~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~~~V~~vN~~Y---~~lT  206 (308)
T PF07387_consen  140 --------KINFSNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLENQVNMVNIEY---ESLT  206 (308)
T ss_pred             --------ccchhHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhhheeeEEeeec---cccC
Confidence                    11111112222 4678888964 378999999999999999999999885544444445554332   3357


Q ss_pred             cchhHHHHHHHHHHHHcCCC
Q 041096          518 EKTDVFSYGVVVLEVACGRR  537 (645)
Q Consensus       518 ~ksDV~SfGvvl~El~tG~~  537 (645)
                      .++.+-+|=.-++++....+
T Consensus       207 ~~aE~~~fv~s~l~~v~~~~  226 (308)
T PF07387_consen  207 QEAEVKVFVKSCLKLVEKQR  226 (308)
T ss_pred             hHHHHHHHHHHHHHHHHHHh
Confidence            88889899888888877443

The function of this family is unknown.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.13  E-value=0.061  Score=37.19  Aligned_cols=23  Identities=13%  Similarity=0.414  Sum_probs=11.6

Q ss_pred             CccceeeeeecchhHHHHHHHHH
Q 041096          286 KHHNKIGLGLGIAGPAFFCVVLA  308 (645)
Q Consensus       286 ~~~~~~~i~~~i~~~~~~~~~~~  308 (645)
                      ++++...|+++++.++.++++++
T Consensus         6 ~~~~~vaIa~~VvVPV~vI~~vl   28 (40)
T PF08693_consen    6 SNSNTVAIAVGVVVPVGVIIIVL   28 (40)
T ss_pred             CCCceEEEEEEEEechHHHHHHH
Confidence            34455556666555554444433

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=93.92  E-value=0.75  Score=48.84  Aligned_cols=80  Identities=16%  Similarity=0.104  Sum_probs=48.1

Q ss_pred             eeccCCceEEEEEEECCCCeEEEEEeccC-------C-cchhHhHHHHHHHHhhcC--CC-CeeeeeeeeeeCCeEEEEE
Q 041096          355 ILGRGAFGNVYKAYFASSGSVAAVKRSKH-------S-HEGKTEFLAELSIIACLR--HK-NLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-------~-~~~~~~~~~Ei~~l~~l~--H~-niv~l~g~~~~~~~~~lV~  423 (645)
                      .||.|....||++....++..++||....       + .-......-|.+.|....  -| .+.+++.  .+.+...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            37999999999999865446789985332       1 112333445666666553  34 3444443  3344567999


Q ss_pred             ecCCCC-CHhHHhh
Q 041096          424 EYMPNG-SLDRMLY  436 (645)
Q Consensus       424 Ey~~~g-sL~~~l~  436 (645)
                      |+++.. .|+..|.
T Consensus        80 EdL~~~~ilR~~Li   93 (370)
T TIGR01767        80 EDLSHHKIARKGLI   93 (370)
T ss_pred             hhCccchHHHHHHH
Confidence            998543 3445443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.79  E-value=0.49  Score=48.63  Aligned_cols=69  Identities=17%  Similarity=0.121  Sum_probs=37.2

Q ss_pred             ccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-C-C-CeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          357 GRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-H-K-NLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       357 G~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H-~-niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ++|-...|+..... .|..+++|.-.. ........+|.++|..+. | + -+.+++..+    .-+++|++++|..+
T Consensus        20 ~~g~~~~v~~i~~~-~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~----~~~~~y~~i~G~p~   91 (276)
T cd05152          20 ESGLDFQVVFAKDT-DGVPWVLRIPRR-PDVSERAAAEKRVLALVRKHLPVQVPDWRVHT----PELIAYPKLPGVPA   91 (276)
T ss_pred             CCcceeEEEEEEcC-CCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhcCCCCCCceeeec----CceEEEeccCCCcc
Confidence            44444556655332 366777776643 233456789999999885 2 1 112222222    12566777666544

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=93.04  E-value=1.1  Score=46.92  Aligned_cols=59  Identities=19%  Similarity=0.295  Sum_probs=37.1

Q ss_pred             CeEEEEEecc--CCcchhHhHHHHHHHHhhcC--CCCeeeeeeeeeeCC--eEEEEEecCCCCCH
Q 041096          373 GSVAAVKRSK--HSHEGKTEFLAELSIIACLR--HKNLVQLLGWCAEKG--ELLLVYEYMPNGSL  431 (645)
Q Consensus       373 ~~~vavK~~~--~~~~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~--~~~lV~Ey~~~gsL  431 (645)
                      ++.+++.+-.  ..........+|..+|+.+.  ---....++.|.++.  ..+.||+|+++..+
T Consensus        48 ~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~  112 (321)
T COG3173          48 GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV  112 (321)
T ss_pred             CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence            5667777221  12233445567777777764  234455677887776  67999999988433

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=92.76  E-value=0.16  Score=52.52  Aligned_cols=142  Identities=14%  Similarity=0.156  Sum_probs=90.1

Q ss_pred             cCHHHHHHHhcC---CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-----------------cc------hhHhH
Q 041096          338 FSYRELRSATRG---FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----------------HE------GKTEF  391 (645)
Q Consensus       338 ~~~~~l~~~~~~---f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----------------~~------~~~~~  391 (645)
                      +.|--|+..+++   +...+.||-|.-+.+|.+-..+ |.+.++|.-+..                 ..      ++-..
T Consensus        79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa  157 (465)
T KOG2268|consen   79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAA  157 (465)
T ss_pred             chHHHHHHHHhcchhhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHH
Confidence            445555554443   5667899999999999998865 677787732210                 00      11234


Q ss_pred             HHHHHHHhhcC-CC-CeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCC
Q 041096          392 LAELSIIACLR-HK-NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE  469 (645)
Q Consensus       392 ~~Ei~~l~~l~-H~-niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  469 (645)
                      .+|...|+.|. |. -+.+.++++    .-++|||++.+-.|...-+-       .+..+++.-+.+   -+.-|-.   
T Consensus       158 ~kEfafmkaL~e~gfpVPkpiD~~----RH~Vvmelv~g~Pl~~v~~v-------~d~~~ly~~lm~---~Iv~la~---  220 (465)
T KOG2268|consen  158 TKEFAFMKALYERGFPVPKPIDHN----RHCVVMELVDGYPLRQVRHV-------EDPPTLYDDLMG---LIVRLAN---  220 (465)
T ss_pred             HHHHHHHHHHHHcCCCCCCccccc----ceeeHHHhhcccceeeeeec-------CChHHHHHHHHH---HHHHHHH---
Confidence            56788888874 32 233344433    45899999988877654322       222333332222   2333444   


Q ss_pred             CCeeeCCCCCCcEEEcCCCCeeeecccc
Q 041096          470 QQVIHRDIKASNIMLDANFNARLESSFT  497 (645)
Q Consensus       470 ~~ivHrDlkp~NIlld~~~~~kl~d~~~  497 (645)
                      +|+||+|..-=||+++++..+.+.|...
T Consensus       221 ~GlIHgDFNEFNimv~dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  221 HGLIHGDFNEFNIMVKDDDKIVVIDFPQ  248 (465)
T ss_pred             cCceecccchheeEEecCCCEEEeechH
Confidence            8999999999999999988888877443

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=92.48  E-value=0.99  Score=47.67  Aligned_cols=73  Identities=15%  Similarity=0.173  Sum_probs=45.7

Q ss_pred             eeccCCceEEEEEEECCC---CeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEecCCCCC
Q 041096          355 ILGRGAFGNVYKAYFASS---GSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .|..|-.-.+|+....+.   +..+++|.........-+..+|..+++.+...++ .++++++..+    +|.+|+++..
T Consensus        21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g~~   96 (330)
T PLN02421         21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINART   96 (330)
T ss_pred             EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcCCC
Confidence            344466677888876432   2378888776543333345678888888865444 3455555322    5899997766


Q ss_pred             H
Q 041096          431 L  431 (645)
Q Consensus       431 L  431 (645)
                      |
T Consensus        97 l   97 (330)
T PLN02421         97 L   97 (330)
T ss_pred             C
Confidence            5

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	645
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-51
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-50
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-42
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-42
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-33
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-33
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-33
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		7e-31
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-22
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-22
1gsl_A	243	Lectin (Fourth Isolated From (Griffonia Simplicifol		1e-20
1hql_A	257	The Xenograft Antigen In Complex With The B4 Isolec		8e-20
1gnz_A	257	Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m		8e-20
3usu_B	242	Crystal Structure Of Butea Monosperma Seed Lectin L		1e-19
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-19
3ipv_B	239	Crystal Structure Of Spatholobus Parviflorus Seed L		1e-19
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-19
3usu_A	256	Crystal Structure Of Butea Monosperma Seed Lectin L		1e-19
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-19
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-19
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-19
3ujo_A	281	Galactose-Specific Seed Lectin From Dolichos Lablab		3e-19
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-19
3ipv_A	251	Crystal Structure Of Spatholobus Parviflorus Seed L		3e-19
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-19
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-19
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		5e-19
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		5e-19
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-19
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		6e-19
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-19
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-19
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-19
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-19
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		8e-19
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		9e-19
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-18
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-18
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-18
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-18
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-18
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-18
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-18
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-18
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-18
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-18
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-18
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-18
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-18
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-18
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-18
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-18
1qnw_A	242	Lectin Ii From Ulex Europaeus Length = 242		3e-18
1wbl_A	241	Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga		4e-18
1wbf_A	242	Winged Bean Lectin, Saccharide Free Form Length = 2		4e-18
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-18
2e7q_A	237	Crystal Structure Of Basic Winged Bean Lectin In Co		4e-18
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-18
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-18
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-18
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-18
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-18
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-18
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-17
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-17
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-17
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-17
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-17
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-17
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-17
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-17
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-17
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-17
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-17
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-17
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-17
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-17
2pel_A	236	Peanut Lectin Length = 236		2e-17
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-17
1bzw_A	232	Peanut Lectin Complexed With C-Lactose Length = 232		2e-17
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-17
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		3e-17
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-17
2eig_A	234	Lotus Tetragonolobus Seed Lectin (Isoform) Length =		3e-17
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-17
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-17
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-17
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-17
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-17
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-17
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-17
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-17
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-17
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-17
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		6e-17
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		7e-17
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-17
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		9e-17
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		9e-17
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		9e-17
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		9e-17
1gz9_A	239	High-Resolution Crystal Structure Of Erythrina Cris		1e-16
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-16
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-16
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-16
3zvx_A	261	Structure Of The Lectin From Platypodium Elegans In		2e-16
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		2e-16
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-16
1fny_A	237	Legume Lectin Of The Bark Of Robinia Pseudoacacia.		3e-16
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-16
3n35_A	242	Erythrina Corallodendron Lectin Mutant (Y106g) With		4e-16
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		4e-16
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-16
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		4e-16
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		5e-16
1lte_A	239	Structure Of A Legume Lectin With An Ordered N-Link		5e-16
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-16
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		5e-16
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		5e-16
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-16
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		6e-16
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-16
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		6e-16
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		6e-16
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-16
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-16
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-16
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		7e-16
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-16
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		8e-16
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-16
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		8e-16
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-16
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-16
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-16
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-16
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-16
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-15
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-15
1ax0_A	239	Erythrina Corallodendron Lectin In Complex With N-A		1e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-15
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-15
1fyu_A	255	Crystal Structure Of Erythrina Corallodendron Lecti		2e-15
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-15
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-15
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-15
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-15
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-15
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-15
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-15
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-15
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-15
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-15
1sfy_A	239	Crystal Structure Of Recombinant Erythrina Corallod		2e-15
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-15
1uzy_A	242	Erythrina Crystagalli Lectin Length = 242		4e-15
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-15
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-15
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-15
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-15
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		6e-15
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		8e-15
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		8e-15
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-15
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-14
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-14
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-14
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-14
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-14
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-14
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-14
1dbn_A	239	Maackia Amurensis Leukoagglutinin (Lectin) With Sia		1e-14
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-14
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-14
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-14
1fat_A	252	Phytohemagglutinin-L Length = 252		2e-14
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-14
1g8w_A	233	Improved Structure Of Phytohemagglutinin-L From The		2e-14
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-14
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-14
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-14
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-14
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-14
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-14
1fay_A	238	Winged Bean Acidic Lectin Complexed With Methyl-Alp		3e-14
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-14
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-14
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-14
2sba_A	253	Soybean Agglutinin Complexed With 2,6-Pentasacchari		4e-14
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-14
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-14
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-14
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-14
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-14
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		7e-14
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-14
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-14
1qmo_E	133	Structure Of Fril, A Legume Lectin That Delays Hema		1e-13
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-13
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-13
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-13
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-13
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-13
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		1e-13
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-13
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		1e-13
2lal_A	181	Crystal Structure Determination And Refinement At 2		2e-13
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-13
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-13
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-13
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-13
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-13
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-13
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-13
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-13
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-13
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-13
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		2e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-13
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		2e-13
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-13
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-13
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-13
3iok_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-13
2ltn_A	181	Design, Expression, And Crystallization Of Recombin		4e-13
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-13
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		5e-13
1ofs_A	187	Pea Lectin-sucrose Complex Length = 187		6e-13
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-13
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-13
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-13
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-13
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		8e-13
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		8e-13
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		8e-13
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-12
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-12
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-12
1loa_A	181	Three-Dimensional Structures Of Complexes Of Lathyr		1e-12
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		2e-12
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-12
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-12
1lof_C	181	X-Ray Structure Of A Biantennary Octasaccharide-Lec		2e-12
1rin_A	180	X-Ray Crystal Structure Of A Pea Lectin-Trimannosid		2e-12
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-12
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-12
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-12
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-12
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-12
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-12
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-12
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-12
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-12
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-12
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-12
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-12
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-12
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-12
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-12
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-12
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-12
1lgb_A	181	Interaction Of A Legume Lectin With The N2 Fragment		4e-12
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		4e-12
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-12
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-12
1lgc_A	181	Interaction Of A Legume Lectin With The N2 Fragment		5e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		5e-12
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-12
1n47_A	233	Isolectin B4 From Vicia Villosa In Complex With The		6e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-12
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-12
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-12
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-12
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-12
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-12
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		8e-12
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		9e-12
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		9e-12
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		9e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		9e-12
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		9e-12
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		9e-12
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-11
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		1e-11
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-11
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-11
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-11
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-11
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-11
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		1e-11
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-11
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-11
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-11
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-11
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		1e-11
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-11
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-11
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-11
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-11
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-11
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		1e-11
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-11
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-11
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-11
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-11
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-11
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-11
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-11
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-11
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-11
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-11
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-11
1fx5_A	242	Crystal Structure Analysis Of Ulex Europaeus Lectin		3e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-11
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-11
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-11
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-11
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		5e-11
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		5e-11
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		5e-11
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-11
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-11
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		6e-11
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		6e-11
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		6e-11
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		7e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-11
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-11
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-11
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		7e-11
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		8e-11
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-11
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		1e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-10
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-10
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-10
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-10
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-10
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-10
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-10
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-10
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-10
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-10
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-10
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-10
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-10
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-10
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-10
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-10
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-10
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-10
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-10
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-10
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-10
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-10
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-10
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-10
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-10
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-10
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-10
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-10
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-10
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-10
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-10
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-10
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-10
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		3e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-10
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-10
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-10
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-10
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-10
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-10
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-10
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-10
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-10
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-10
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-10
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-10
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-10
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-10
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-10
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-10
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-10
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		4e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-10
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-10
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-10
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		4e-10
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-10
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-10
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-10
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-10
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-10
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-10
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		5e-10
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-10
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-10
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-10
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		6e-10
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		7e-10
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-10
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		7e-10
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		7e-10
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-10
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		8e-10
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-10
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-10
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		8e-10
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		9e-10
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		9e-10
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-10
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		9e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-09
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-09
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-09
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-09
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-09
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-09
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-09
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-09
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-09
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-09
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-09
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-09
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-09
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-09
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-09
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-09
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-09
2ovu_A	237	Crystal Strucure Of A Lectin From Canavalia Gladiat		2e-09
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-09
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-09
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-09
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-09
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-09
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-09
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-09
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-09
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-09
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-09
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-09
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-09
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-09
1avb_A	226	Arcelin-1 From Phaseolus Vulgaris L Length = 226		2e-09
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-09
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-09
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-09
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-09
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-09
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-09
2b7y_A	182	Fava Bean Lectin-Glucose Complex Length = 182		3e-09
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-09
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		3e-09
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-09
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-09
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-09
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-09
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-09
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-09
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-09
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-09
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-09
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-09
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-09
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-09
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-09
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-09
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		4e-09
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		4e-09
2yz4_A	237	The Neutron Structure Of Concanavalin A At 2.2 Angs		4e-09
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		5e-09
2ctv_A	237	High Resolution Crystallographic Studies Of Native		5e-09
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-09
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		5e-09
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		5e-09
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		5e-09
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		5e-09
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-09
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-09
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-09
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		5e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-09
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-09
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-09
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		6e-09
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		6e-09
1wuv_A	237	Crystal Structure Of Native Canavalia Gladiata Lect		6e-09
1azd_A	237	Concanavalin From Canavalia Brasiliensis Length = 2		6e-09
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		6e-09
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		6e-09
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-09
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-09
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-09
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-09
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		6e-09
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-09
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-09
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-09
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-09
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-09
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		7e-09
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-09
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-09
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-09
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		7e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		7e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-09
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		8e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		8e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		9e-09
2cwm_A	237	Native Crystal Structure Of No Releasing Inductive		9e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		9e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		9e-09
2ow4_A	237	Crystal Structure Of A Lectin From Canavalia Mariti		9e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-08
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-08
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-08
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		1e-08
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-08
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-08
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-08
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-08
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-08
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-08
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-08
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-08
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-08
1cn1_A	237	Crystal Structure Of Demetallized Concanavalin A. T		2e-08
2cna_A	237	The Covalent And Three-Dimensional Structure Of Con		2e-08
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-08
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-08
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-08
2je7_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		2e-08
2jdz_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		2e-08
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-08
3a0k_A	237	Crystal Structure Of An Antiflamatory Legume Lectin		2e-08
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-08
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-08
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-08
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-08
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-08
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		3e-08
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-08
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-08
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-08
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-08
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-08
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-08
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-08
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-08
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-08
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-08
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-08
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-08
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-08
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-08
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		4e-08
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-08
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-08
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-08
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-08
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-08
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-08
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		4e-08
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-08
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		4e-08
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		4e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		5e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		5e-08
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-08
1h9w_A	237	Native Dioclea Guianensis Seed Lectin Length = 237		5e-08
2jec_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		6e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-08
1h9p_A	237	Crystal Structure Of Dioclea Guianensis Seed Lectin		6e-08
2gdf_A	237	Crystal Structure Of Dioclea Violacea Seed Lectin L		6e-08
3rrd_A	237	Native Structure Of Dioclea Virgata Lectin Length =		6e-08
2je9_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		6e-08
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		6e-08
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		6e-08
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		6e-08
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-08
3sh3_A	237	Crystal Structure Of A Pro-Inflammatory Lectin From		7e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		8e-08
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		8e-08
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		9e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		9e-08
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-08
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		9e-08
1mvq_A	236	Cratylia Mollis Lectin (Isoform 1) In Complex With		9e-08
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		9e-08
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-07
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-07
2zbj_A	237	Crystal Structure Of Dioclea Rostrata Lectin Length		1e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-07
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-07
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-07
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-07
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-07
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-07
3u4x_A	236	Crystal Structure Of A Lectin From Camptosema Pedic		2e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-07
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		2e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-07
1dgl_A	237	Lectin From Dioclea Grandiflora Complexed To Triman		2e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-07
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-07
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-07
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-07
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-07
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-07
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-07
2d3p_A	236	Cratylia Floribunda Seed Lectin Crystallized At Bas		3e-07
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-07
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-07
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-07
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-07
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-07
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-07
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-07
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-07
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-07
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-07
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-07
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-07
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		4e-07
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-07
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-07
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-07
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-07
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-07
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-07
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-07
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-07
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-07
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-07
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		5e-07
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-07
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-07
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-07
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		6e-07
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-07
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-07
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-07
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-07
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		7e-07
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		7e-07
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		8e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		8e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		8e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		9e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		9e-07
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		9e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		9e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-06
3soa_A	444	Full-Length Human Camkii Length = 444		1e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-06
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		1e-06
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		1e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-06
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-06
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-06
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-06
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-06
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-06
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-06
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-06
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		3e-06
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		3e-06
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-06
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		3e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-06
3gni_B	389	Structure Of Strad And Mo25 Length = 389		3e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		3e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-06
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-06
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		5e-06
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		6e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		6e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		6e-06
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		6e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-06
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		7e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		7e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		7e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-06
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		8e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		9e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		9e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		9e-06
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-05
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-05
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-05
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-05
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		1e-05
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-05
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-05
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-05
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-05
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-05
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-05
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-05
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-05
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-05
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-05
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-05
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-05
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-05
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-05
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		2e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-05
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-05
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-05
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-05

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  199 bits (506), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 163/295 (55%), Gaps = 19/295 (6%)
Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLA 393
           + FS REL+ A+  F +  ILGRG FG VYK   A  G++ AVKR K      G+ +F  
Sbjct: 26  KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQT 84
Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           E+ +I+   H+NL++L G+C    E LLVY YM NGS+   L +  E+   L W  R  I
Sbjct: 85  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------- 500
            +G A  L YLH  C+ ++IHRD+KA+NI+LD  F A +   F L               
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV-GDFGLAKLMDYKDXHVXXAV 203
Query: 501 -GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGL 558
            GT+G++APEYL  G ++EKTDVF YGV++LE+  G+R  +         V L+DWV GL
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA 613
             E ++    D  L G + ++E+++L+ V L C       RP M  V ++L  + 
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  196 bits (497), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/295 (38%), Positives = 162/295 (54%), Gaps = 19/295 (6%)
Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLA 393
           + FS REL+ A+  F +  ILGRG FG VYK   A  G + AVKR K   +  G+ +F  
Sbjct: 18  KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQT 76
Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           E+ +I+   H+NL++L G+C    E LLVY YM NGS+   L +  E+   L W  R  I
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------- 500
            +G A  L YLH  C+ ++IHRD+KA+NI+LD  F A +   F L               
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV-GDFGLAKLMDYKDXHVXXAV 195
Query: 501 -GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGL 558
            G +G++APEYL  G ++EKTDVF YGV++LE+  G+R  +         V L+DWV GL
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA 613
             E ++    D  L G + ++E+++L+ V L C       RP M  V ++L  + 
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 24/287 (8%)
Query: 339 SYR----ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           SYR    +L  AT  F    ++G G FG VYK        VA  +R+  S +G  EF  E
Sbjct: 26  SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
           +  ++  RH +LV L+G+C E+ E++L+Y+YM NG+L R LY      + +SW  RL I 
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT--------------- 499
           +G A  L YLH    + +IHRD+K+ NI+LD NF  ++ + F ++               
Sbjct: 146 IGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKI-TDFGISKKGTELDQTHLXXVV 201
Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY 559
            GT+GY+ PEY   G  TEK+DV+S+GVV+ EV C R  I  ++   +MVNL +W    +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-QSLPREMVNLAEWAVESH 260
Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
             G++ +  D  L      + +++     + C    S  RPSM  V 
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 24/287 (8%)
Query: 339 SYR----ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           SYR    +L  AT  F    ++G G FG VYK        VA  +R+  S +G  EF  E
Sbjct: 26  SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
           +  ++  RH +LV L+G+C E+ E++L+Y+YM NG+L R LY      + +SW  RL I 
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT--------------- 499
           +G A  L YLH    + +IHRD+K+ NI+LD NF  ++ + F ++               
Sbjct: 146 IGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKI-TDFGISKKGTELGQTHLXXVV 201
Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY 559
            GT+GY+ PEY   G  TEK+DV+S+GVV+ EV C R  I  ++   +MVNL +W    +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-QSLPREMVNLAEWAVESH 260
Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
             G++ +  D  L      + +++     + C    S  RPSM  V 
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 39/300 (13%)
Query: 338 FSYRELRSATRGFHSNRI------LGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHE 386
           FS+ EL++ T  F    I      +G G FG VYK Y   + +  AVK+        + E
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS-LDRMLYQDSENGVLL 445
            K +F  E+ ++A  +H+NLV+LLG+ ++  +L LVY YMPNGS LDR+   D      L
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--L 130
Query: 446 SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------ 499
           SW+ R  I  G A+ + +LH   E   IHRDIK++NI+LD  F A++ S F L       
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI-SDFGLARASEKF 186
Query: 500 ---------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                     GT  Y+APE L+ G  T K+D++S+GVV+LE+  G   ++   E   +  
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 243
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L         E  I +  DK++N A +   ++ +  V   C +   + RP +++V Q+L 
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 39/300 (13%)
Query: 338 FSYRELRSATRGFHSNRI------LGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHE 386
           FS+ EL++ T  F    I      +G G FG VYK Y   + +  AVK+        + E
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 66
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS-LDRMLYQDSENGVLL 445
            K +F  E+ ++A  +H+NLV+LLG+ ++  +L LVY YMPNGS LDR+   D      L
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--L 124
Query: 446 SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------ 499
           SW+ R  I  G A+ + +LH   E   IHRDIK++NI+LD  F A++ S F L       
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI-SDFGLARASEKF 180
Query: 500 ---------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                     GT  Y+APE L+ G  T K+D++S+GVV+LE+  G   ++   E   +  
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 237
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L         E  I +  DK++N A +   ++ +  V   C +   + RP +++V Q+L 
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 39/300 (13%)
Query: 338 FSYRELRSATRGFHSNRI------LGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHE 386
           FS+ EL++ T  F    I      +G G FG VYK Y   + +  AVK+        + E
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS-LDRMLYQDSENGVLL 445
            K +F  E+ ++A  +H+NLV+LLG+ ++  +L LVY YMPNGS LDR+   D      L
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--L 130
Query: 446 SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------ 499
           SW+ R  I  G A+ + +LH   E   IHRDIK++NI+LD  F A++ S F L       
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI-SDFGLARASEKF 186
Query: 500 ---------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                     GT  Y+APE L+ G  T K+D++S+GVV+LE+  G   ++   E   +  
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 243
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L         E  I +  DK++N A +   ++ +  V   C +   + RP +++V Q+L 
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  132 bits (331), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 39/300 (13%)
Query: 338 FSYRELRSATRGFHSNRI------LGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHE 386
           FS+ EL++ T  F    I       G G FG VYK Y   + +  AVK+        + E
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 63
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS-LDRMLYQDSENGVLL 445
            K +F  E+ + A  +H+NLV+LLG+ ++  +L LVY Y PNGS LDR+   D      L
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--L 121
Query: 446 SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------ 499
           SW+ R  I  G A+ + +LH   E   IHRDIK++NI+LD  F A++ S F L       
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI-SDFGLARASEKF 177
Query: 500 ---------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                     GT  Y APE L+ G  T K+D++S+GVV+LE+  G   ++   E   +  
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 234
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L         E  I +  DK+ N A +   ++    V   C +   + RP +++V Q+L 
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 135/284 (47%), Gaps = 41/284 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +G G+FG V++A +  S     +   +  H E   EFL E++I+  LRH N+V  +G   
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
           +   L +V EY+  GSL R+L++      L     RL++   +A  + YLH      ++H
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE-RRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 475 RDIKASNIMLDANFN--------ARLESSFTL----TAGTMGYLAPEYLQYGTATEKTDV 522
           RD+K+ N+++D  +         +RL++S  L     AGT  ++APE L+   + EK+DV
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 523 FSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD---KRLNGAFNED 579
           +S+GV++ E+A  ++P                 WG     +++ A     KRL    N +
Sbjct: 223 YSFGVILWELATLQQP-----------------WGNLNPAQVVAAVGFKCKRLEIPRNLN 265
Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
                ++ G  C   +   RPS   +  +L     PL+   + P
Sbjct: 266 PQVAAIIEG--CWTNEPWKRPSFATIMDLL----RPLIKSAVPP 303

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 41/284 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +G G+FG V++A +  S     +   +  H E   EFL E++I+  LRH N+V  +G   
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
           +   L +V EY+  GSL R+L++      L     RL++   +A  + YLH      ++H
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE-RRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 475 RDIKASNIMLDANFN--------ARLESSFTLT----AGTMGYLAPEYLQYGTATEKTDV 522
           R++K+ N+++D  +         +RL++S  L+    AGT  ++APE L+   + EK+DV
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 523 FSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD---KRLNGAFNED 579
           +S+GV++ E+A  ++P                 WG     +++ A     KRL    N +
Sbjct: 223 YSFGVILWELATLQQP-----------------WGNLNPAQVVAAVGFKCKRLEIPRNLN 265
Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKP 623
                ++ G  C   +   RPS   +  +L     PL+   + P
Sbjct: 266 PQVAAIIEG--CWTNEPWKRPSFATIMDLL----RPLIKSAVPP 303

>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 19/240 (7%)
Query: 23  NNMNF---DFTSFNLRN---ITLLGDSYLRNGVIGLTREL--GVPA-SSSGSLIYNNPVP 73
           N +NF   DF S++L+N   IT LGD+    G + LT+    G P  SS+G   Y+ PV 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61
Query: 74  FFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLV---NSSQ 130
            +D                 N   P++  DGLAFF++P +  +   GG LGL     ++ 
Sbjct: 62  LWDSTGKAASFYTSFTFLLKNYGAPTA--DGLAFFLAPVDSSVKDYGGFLGLFRHETAAD 119
Query: 131 LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWID 190
            +KN+ VA+EFDT ++  ++DP   HIG+D++S+ S+ T     +  D    ++ TA I 
Sbjct: 120 PSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR--WENDDAYGSSIATAHIT 177
Query: 191 YKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
           Y    ++L V +SY + +    +L   +DL+  L   + +GFSA   G  E+  I SW F
Sbjct: 178 YDARSKILTVLLSYEHGRDY--ILSHVVDLAKVLPQKVRIGFSAGV-GYDEVTYILSWHF 234

>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 22  SNNMNFDFTSFNLR---NITLLGDSYLRNGVIGL--TRELGVPAS-SSGSLIYNNPVPFF 75
           S++++F F +F      +I   GD+    G + L  T + G P   S+G  +Y++PV  +
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61
Query: 76  DQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS---QLT 132
           D +              +  +  +   DGLAFF++P +  +  AG  LGL N S   Q +
Sbjct: 62  DNKTESVASFYTEFTFFLK-ITGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPS 120
Query: 133 KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
           KN+ VA+EFDT  +P+F +P   HIG++++S+ S+ T     +  D+ SG + TA I Y 
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--WEDSDIFSGKIATARISYD 178
Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHM-IQSWSFQ 251
               +L V +SY +      +L  ++D+   L  ++ VG SAST  +  L + I SW F 
Sbjct: 179 GSAEILTVVLSYPDGSDY--ILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236
Query: 252 T 252
           +
Sbjct: 237 S 237

>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 22  SNNMNFDFTSFNLR---NITLLGDSYLRNGVIGL--TRELGVPAS-SSGSLIYNNPVPFF 75
           S++++F F +F      +I   GD+    G + L  T + G P   S+G  +Y++PV  +
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61
Query: 76  DQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS---QLT 132
           D +              +  +  +   DGLAFF++P +  +  AG  LGL N S   Q +
Sbjct: 62  DNKTESVASFYTEFTFFLK-ITGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPS 120
Query: 133 KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
           KN+ VA+EFDT  +P+F +P   HIG++++S+ S+ T     +  D+ SG + TA I Y 
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--WEDSDIFSGKIATARISYD 178
Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHM-IQSWSFQ 251
               +L V +SY +      +L  ++D+   L  ++ VG SAST  +  L + I SW F 
Sbjct: 179 GSAEILTVVLSYPDGSDY--ILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236
Query: 252 T 252
           +
Sbjct: 237 S 237

>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 16/241 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYL-RNGVIGLTR--ELGVPASSS-GSLIYNNPVPFF 75
           +N  +F F+ F  N  N+   GD+ +  +G + LT+  + GVP   S G  +Y +P+  +
Sbjct: 2   TNTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIW 61
Query: 76  DQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN- 134
           D +              I   N ++  DGLAFF++P +    +  G LGL +S+    + 
Sbjct: 62  DSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSY 121
Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
           + VA+EFDT  +  F DP + HIG+D++S++SIKT        DL +G      I Y + 
Sbjct: 122 QTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTVK-----WDLANGEAAKVLITYDSS 176
Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST---ELHMIQSWSFQ 251
            ++L   + Y + K  + +L   +DL   L   + +GFSA+T  S+   E H + SWSF 
Sbjct: 177 AKLLVAALVYPSSK-TSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSFA 235
Query: 252 T 252
           +
Sbjct: 236 S 236

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 31/269 (11%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             ++GRGAFG V KA + +     A+K+ +   E K  F+ EL  ++ + H N+V+L G 
Sbjct: 14  EEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYGA 70
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           C     + LV EY   GSL  +L+  +E     +  H ++  +  +  + YLH    + +
Sbjct: 71  CLNP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 473 IHRDIKASNIML----------DANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           IHRD+K  N++L          D      +++  T   G+  ++APE  +    +EK DV
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 187
Query: 523 FSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMK 582
           FS+G+++ EV   R+P + E  G                 RI+ A          ++  K
Sbjct: 188 FSWGIILWEVITRRKPFD-EIGGPAF--------------RIMWAVHNGTRPPLIKNLPK 232
Query: 583 RLLLVGLSCANPDSSARPSMRRVFQILNN 611
            +  +   C + D S RPSM  + +I+ +
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIVKIMTH 261

>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 36  NITLLGDSYLR-NGVIGLTR--ELGVPASSS-GSLIYNNPVPFFDQEXXXXXXXXXXXXX 91
           N+ L GD+ +   GV+ LT     GVP  SS G   Y+ P+  +D               
Sbjct: 17  NLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRF 76
Query: 92  XINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKFVAIEFDTRLDPHFD 150
            I   N ++  DGLAFF++P      S GG LGL +S+   T  + VA+EFDT  +  F 
Sbjct: 77  TIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFT 136
Query: 151 DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPV 210
           DP   HIG D++S+ SIKT         L +G      I Y + +++L   + Y + K  
Sbjct: 137 DPPYTHIGFDVNSISSIKTVK-----WSLANGEAAKVLITYNSAVKLLVASLVYPSSK-T 190
Query: 211 TPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + +L   +DLS  L   + VGFSA+T   +G  E H + SWSF +
Sbjct: 191 SFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSFAS 235

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 31/269 (11%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             ++GRGAFG V KA + +     A+K+ +   E K  F+ EL  ++ + H N+V+L G 
Sbjct: 13  EEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA-FIVELRQLSRVNHPNIVKLYGA 69
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           C     + LV EY   GSL  +L+  +E     +  H ++  +  +  + YLH    + +
Sbjct: 70  CLNP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 473 IHRDIKASNIML----------DANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           IHRD+K  N++L          D      +++  T   G+  ++APE  +    +EK DV
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 186
Query: 523 FSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMK 582
           FS+G+++ EV   R+P + E  G                 RI+ A          ++  K
Sbjct: 187 FSWGIILWEVITRRKPFD-EIGGPAF--------------RIMWAVHNGTRPPLIKNLPK 231
Query: 583 RLLLVGLSCANPDSSARPSMRRVFQILNN 611
            +  +   C + D S RPSM  + +I+ +
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 16/241 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYL-RNGVIGLTR--ELGVPASSS-GSLIYNNPVPFF 75
           +N  +F F+ F  N  N+   GD+ +  +G + LT+  + GVP   S G  +Y +P+  +
Sbjct: 2   TNTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIW 61
Query: 76  DQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN- 134
           D +              I   N ++  DGLAFF++P +    +  G LGL +S+    + 
Sbjct: 62  DSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSY 121
Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
           + VA+EFDT  +  F DP + HIG+D++S++SIKT        DL +G      I Y + 
Sbjct: 122 QTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTVK-----WDLANGEAAKVLITYDSS 176
Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST---ELHMIQSWSFQ 251
            ++L   + Y + K  + +L   +DL   L   + +GFSA+T  S+   E H + SWSF 
Sbjct: 177 AKLLVAALVYPSSK-TSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSFA 235
Query: 252 T 252
           +
Sbjct: 236 S 236

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KT 389
           GPR++       A   F   R LG+G FGNVY A    S  + A+K   +++    G + 
Sbjct: 1   GPRQW-------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           +   E+ I + LRH N+++L G+  +   + L+ EY P G++ R L + S+         
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQR 109
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT 499
               +  LA+AL+Y H    ++VIHRDIK  N++L +    ++           S  T  
Sbjct: 110 TATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWG 557
            GT+ YL PE ++     EK D++S GV+  E   G+ P E  T  E +K ++ V++ + 
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAE 614
            +    + E A          D + RLL       NP  S RP +R V +   I  N ++
Sbjct: 227 DF----VTEGA---------RDLISRLLK-----HNP--SQRPMLREVLEHPWITANSSK 266
Query: 615 P 615
           P
Sbjct: 267 P 267

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        ANF   +    S  T   GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 236
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 237 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 270

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        ANF   +    S  T   GT+ YL PE +
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 180
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 235
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 236 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 269

>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 16/255 (6%)
Query: 5   KLLVFFSIFLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTR--ELGVP-AS 61
           K +V F I L   +   +N ++F F  FN  N+ L  D+ + +G + +T+  E GVP A 
Sbjct: 9   KRIVLFLILLTKAA--SANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAG 66
Query: 62  SSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGG 121
           S G   Y+ P+  +D                +   N +S  DGLAF + P        GG
Sbjct: 67  SLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQPKDKGG 126
Query: 122 CLGLVNSSQL-TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLK 180
            LGL +S    + N+ VA+EFDT  +  +D P E HIG+D++S++SIKT        D  
Sbjct: 127 FLGLFDSKNYASSNQTVAVEFDTFYNGGWD-PTERHIGIDVNSIKSIKTTS-----WDFA 180
Query: 181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---E 237
           +G      I Y +   +L   + + + K  + ++   +DL+  L   + VGFSA+T   +
Sbjct: 181 NGENAEVLITYDSSTNLLVASLVHPSQK-TSFIVSERVDLTSVLPEWVSVGFSATTGLSK 239
Query: 238 GSTELHMIQSWSFQT 252
           G  E + + SWSF +
Sbjct: 240 GYVETNEVLSWSFAS 254

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KT 389
           GPR++       A   F   R LG+G FGNVY A    S  + A+K   +++    G + 
Sbjct: 1   GPRQW-------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           +   E+ I + LRH N+++L G+  +   + L+ EY P G++ R L + S+         
Sbjct: 54  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQR 109
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT 499
               +  LA+AL+Y H    ++VIHRDIK  N++L +    ++           S  T  
Sbjct: 110 TATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWG 557
            GT+ YL PE ++     EK D++S GV+  E   G+ P E  T  E +K ++ V++ + 
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAE 614
            +    + E A          D + RLL       NP  S RP +R V +   I  N ++
Sbjct: 227 DF----VTEGA---------RDLISRLLK-----HNP--SQRPMLREVLEHPWITANSSK 266
Query: 615 P 615
           P
Sbjct: 267 P 267

>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 36  NITLLGDSYLR-NGVIGLTR--ELGVPASSS-GSLIYNNPVPFFDQEXXXXXXXXXXXXX 91
           N+ L GD+ +   GV+ LT   + GVP  SS G   Y+ P+  +D               
Sbjct: 17  NLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRF 76
Query: 92  XINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKFVAIEFDTRLDPHFD 150
            I   N ++  DGLAFF++P      S GG LGL +S+   +  + VA+EFDT  +  F 
Sbjct: 77  TIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFT 136
Query: 151 DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPV 210
           DP   HIG D++S+ SIKT         L +G      I Y + +++L   + Y + K  
Sbjct: 137 DPPYTHIGFDVNSISSIKTVK-----WSLANGEAAKVLITYNSAVKLLVASLVYPSSKTS 191
Query: 211 TPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
             L  + +DLS  L   + VGFSA+T    G  E H + SWSF +
Sbjct: 192 FILADI-VDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFAS 235

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNL 406
            +++G G FG VYK    +S     V       ++ ++ + + +FL E  I+    H N+
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLH 465
           ++L G  ++   ++++ EYM NG+LD+ L + D E  VL      + ++ G+A+ + YL 
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL----QLVGMLRGIAAGMKYL- 163
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEY 510
                  +HRD+ A NI++++N   ++             E+++T + G +   + APE 
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 511 LQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
           + Y   T  +DV+S+G+V+ EV   G RP
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERP 250

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 259
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 260 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 293

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T  +GT+ YL PE +
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI 179
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 234
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 235 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 268

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 83  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 138
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 139 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 195
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 250
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 251 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 284

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXI 183
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 238
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 239 -------------RDLISRLLKHNP--SQRPXLREVLEHPWITANSSKP 272

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 14/238 (5%)
Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTR--ELGVPASSS-GSLIYNNPVPFFDQE 78
           +N  +F F +FN  +  L GD+ + +G + LT+  E G+P  SS G   Y++P+  +D+ 
Sbjct: 1   ANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKS 60
Query: 79  XXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN-KFV 137
                         I+  + +SF DG+AF + P        GG LG+ +S     + + V
Sbjct: 61  TGAVASWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTV 120
Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  + DP   HIG+D++S++SI T        DL +G      I Y     +
Sbjct: 121 AVEFDTLSNSGW-DPSMKHIGIDVNSIKSIATV-----SWDLANGENAEILITYNAATSL 174
Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           L   + + + +  + +L   +D++  L   + VGFSA+T   EG  E H + SWSF +
Sbjct: 175 LVASLVHPSRR-TSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFAS 231

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 125
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 237
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 238 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 271

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 234 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 120
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 121 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 232
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 233 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 266

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 238
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 239 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 272

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 236
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 237 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 270

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G +    Y++ +             +  LA+AL
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 238
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 239 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 272

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 234 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 234
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 235 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 268

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 238
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 239 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 272

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 462 TYLHQECEQQVIHRDIKASNIML---------DANFNARLESSFTLT-AGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L         D  ++    SS   T  GT+ YL PE +
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMI 179
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 234
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 235 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 268

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 234 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVW 556
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTA---GTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   + +  +  A   GT+ YL PE +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 234 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLT---AGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   + +  +      GT+ YL PE +
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMI 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 259
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 260 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 293

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTA---GTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   + +  +  A   GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 236
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 237 --------RDLISRLLK-----HNP--SQRPMLREVLEHPWITANSSKP 270

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A   +S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTA---GTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   + +  +  A   GT+ YL PE +
Sbjct: 122 SYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  + +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 234 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 27/254 (10%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACLRHKN 405
           F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + LRH N
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++L G+  +   + L+ EY P G++ R L + S              +  LA+AL+Y H
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCH 129
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGT 515
               ++VIHRDIK  N++L +N   ++           S  T   GT+ YL PE ++   
Sbjct: 130 S---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAADKRLN 573
             EK D++S GV+  E   G  P E  T  E ++ ++ V++ +  +    + E A   ++
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF----VTEGARDLIS 242
Query: 574 GAFNEDEMKRLLLV 587
                +  +RL L 
Sbjct: 243 RLLKHNASQRLTLA 256

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S      GT+ YL PE +
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 235
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 236 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 269

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLT---AGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   + +  +      GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 236
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 237 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 270

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 33/207 (15%)
Query: 355 ILGRGAFGNVYKAYFASSG--SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ L
Sbjct: 32  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD------SENGVLLSWYHRLNIVVGL 457
           LG C  +G L L  EY P+G+L       R+L  D      +     LS    L+    +
Sbjct: 92  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A  + YL Q   +Q IHRD+ A NI++  N+ A++ + F L+ G       TMG     +
Sbjct: 152 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T  +DV+SYGV++ E+
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEI 234

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 33/207 (15%)
Query: 355 ILGRGAFGNVYKAYFASSG--SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ L
Sbjct: 22  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD------SENGVLLSWYHRLNIVVGL 457
           LG C  +G L L  EY P+G+L       R+L  D      +     LS    L+    +
Sbjct: 82  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A  + YL Q   +Q IHRD+ A NI++  N+ A++ + F L+ G       TMG     +
Sbjct: 142 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T  +DV+SYGV++ E+
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEI 224

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S      GT+ YL PE +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 233
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                    D + RLL       NP  S RP +R V +   I  N ++P
Sbjct: 234 --------RDLISRLL-----KHNP--SQRPMLREVLEHPWITANSSKP 267

>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 17/242 (7%)
Query: 21  LSNNMNFDFTSF--NLRNITLLGDSYLRN-GVIGLTRELGVPASSSGSLIYNNPVPFFDQ 77
           LS++++F+F  F  N +NI   GD+ +   GV+ +T+      +S G  +Y  P+  +D 
Sbjct: 2   LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDS 61
Query: 78  EXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGL-VNSSQLTKN 134
                          +   + S   DGLAFF++P N  +  GS+ G  GL  +S   + N
Sbjct: 62  ITGKVASFATSFSFVVK-ADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSN 120
Query: 135 KFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
           + +A+EFDT     ++  DPD  HIG+D++S++SIKT        D ++G V    I Y+
Sbjct: 121 QIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVK-----WDWRNGEVADVVITYR 175
Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTEL--HMIQSWSF 250
              + L V +SY +    + ++  ++DL   L   + VGFS     + E   H + SW F
Sbjct: 176 APTKSLTVCLSYPS-DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234
Query: 251 QT 252
            +
Sbjct: 235 TS 236

>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 25  MNFDFTSF--NLRNITLLGDSYLR-NGVIGLTREL-GVPA-SSSGSLIYNNPVPFFDQEX 79
           ++F+F  F  N   + L  D+ +  N V+ LT+ + GVP  +S+G  +Y  PV  +D   
Sbjct: 3   ISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTT 62
Query: 80  XXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVA 138
                        I    P     DGL FFI+P N   G  GG  G+ N   L+   FVA
Sbjct: 63  GNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP--LSPYPFVA 120
Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +    DP   HIG+D++S+ S KT         L +G +    I Y    ++L
Sbjct: 121 VEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-----FTLDNGGIANVVIKYDASTKIL 173
Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-------EGSTELHMIQSWSFQ 251
            V + + +L  +  +  + +DL   L  ++ VGFSA+T         +TE H I SWSF 
Sbjct: 174 HVVLVFPSLGTIYTIADI-VDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFS 232
Query: 252 TS 253
            S
Sbjct: 233 AS 234

>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 25  MNFDFTSF--NLRNITLLGDSYLR-NGVIGLTREL-GVPA-SSSGSLIYNNPVPFFDQEX 79
           ++F+F  F  N   + L  D+ +  N V+ LT+ + GVP  +S+G  +Y  PV  +D   
Sbjct: 4   ISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTT 63
Query: 80  XXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVA 138
                        I    P     DGL FFI+P N   G  GG  G+ N   L+   FVA
Sbjct: 64  GNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP--LSPYPFVA 121
Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +    DP   HIG+D++S+ S KT         L +G +    I Y    ++L
Sbjct: 122 VEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-----FTLDNGGIANVVIKYDASTKIL 174
Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-------EGSTELHMIQSWSFQ 251
            V + + +L  +  +  + +DL   L  ++ VGFSA+T         +TE H I SWSF 
Sbjct: 175 HVVLVFPSLGTIYTIADI-VDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFS 233
Query: 252 TS 253
            S
Sbjct: 234 AS 235

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-----FLAELSIIACLRHKNLVQL 409
           I+G G FG VY+A++   G   AVK ++H  +            E  + A L+H N++ L
Sbjct: 14  IIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLY-QDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
            G C ++  L LV E+   G L+R+L  +     +L++W       V +A  + YLH E 
Sbjct: 72  RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 469 EQQVIHRDIKASNIML-------DANFNARLESSFTL-----------TAGTMGYLAPEY 510
              +IHRD+K+SNI++       D +      + F L            AG   ++APE 
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           ++    ++ +DV+SYGV++ E+  G  P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213

>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 25  MNFDFTSF--NLRNITLLGDSYLR-NGVIGLTREL-GVPA-SSSGSLIYNNPVPFFDQEX 79
           ++F+F  F  N   + L  D+ +  N V+ LT+ + GVP  +S+G  +Y  PV  +D   
Sbjct: 3   ISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTT 62
Query: 80  XXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVA 138
                        I    P     DGL FFI+P N   G  GG  G+ N   L+   FVA
Sbjct: 63  GNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNP--LSPYPFVA 120
Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +    DP   HIG+D++S+ S KT         L +G +    I Y    ++L
Sbjct: 121 VEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-----FTLDNGGIANVVIKYDASTKIL 173
Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-------EGSTELHMIQSWSFQ 251
            V + + +L  +  +  + +DL   L  ++ VGFSA+T         +TE H I SWSF 
Sbjct: 174 HVVLVFPSLGTIYTIADI-VDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFS 232
Query: 252 TS 253
            S
Sbjct: 233 AS 234

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 38/233 (16%)
Query: 338 FSYRELRSATRGFHSN---------RILGRGAFGNVYKAYFASSGS---VAAVK--RSKH 383
           F++ +   A R F            +++G G FG V   +    G      A+K  +S +
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 384 SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
           + + + +FL+E SI+    H N++ L G   +   ++++ E+M NGSLD  L Q+     
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE---------- 493
           ++     + ++ G+A+ + YL    +   +HRD+ A NI++++N   ++           
Sbjct: 134 VI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 494 --SSFTLTAGTMG-----YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
             S  T T+   G     + APE +QY   T  +DV+SYG+V+ EV + G RP
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 46/289 (15%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G +    Y++ +             +  LA+AL
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L +    ++           S      GT+ YL PE +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVWGLYAEGRIIEAAD 569
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +  +    + E A 
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGA- 238
Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ---ILNNEAEP 615
                        R L+  L   NP  S RP +R V +   I  N ++P
Sbjct: 239 -------------RDLISRLLKHNP--SQRPMLREVLEHPWITANSSKP 272

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 23/227 (10%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A       + A+K   +++    G + +   E+ I + L
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 63  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 118
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S  T   GT+ YL PE +
Sbjct: 119 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 175
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVW 556
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 23/227 (10%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACL 401
           A   F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           RH N+++L G+  +   + L+ EY P G++ R L + S+             +  LA+AL
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLE---SSFTLTAGTMGYLAPEYL 511
           +Y H    ++VIHRDIK  N++L        A+F   +    S      GT+ YL PE +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVW 556
           +     EK D++S GV+  E   G+ P E  T  E +K ++ V++ +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G +   + +PE +
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G +   + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G +   + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 48  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 161
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 162 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 263
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 264 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 304

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 33/207 (15%)
Query: 355 ILGRGAFGNVYKAYFASSG--SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQL 409
           ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ L
Sbjct: 29  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 410 LGWCAEKGELLLVYEYMPNGSL------DRMLYQD------SENGVLLSWYHRLNIVVGL 457
           LG C  +G L L  EY P+G+L       R+L  D      +     LS    L+    +
Sbjct: 89  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAG-------TMG-----Y 505
           A  + YL Q   +Q IHR++ A NI++  N+ A++ + F L+ G       TMG     +
Sbjct: 149 ARGMDYLSQ---KQFIHRNLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +A E L Y   T  +DV+SYGV++ E+
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEI 231

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACLRHKN 405
           F   R LG+G FGNVY A    S  + A+K   +++    G + +   E+ I + LRH N
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++L G+  +   + L+ EY P G++ R L + S              +  LA+AL+Y H
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCH 129
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGT 515
               ++VIHRDIK  N++L +N   ++           S      GT+ YL PE ++   
Sbjct: 130 S---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET--EGHKMVNLVDWVW 556
             EK D++S GV+  E   G  P E  T  E ++ ++ V++ +
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 38  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 98  RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLS- 152
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 153 --DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 253
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 254 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 294

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 21  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V EYM NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 81  RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLS- 135
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 136 --DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 236
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 85  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 139
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 79  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 31  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 88
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 89  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 143
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNL 551
           +S+G+++ E+   GR P    T    + NL
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 26  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 83
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 84  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 138
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 235

>pdb|2PEL|A Chain A, Peanut Lectin Length = 236

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 25  MNFDFTSFNLRN--ITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXX 81
           ++F+F SF+  N  I   GD + L NG I LT    V  +S G ++Y  PV  +      
Sbjct: 4   VSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKV--NSVGRVLYAMPVRIWSSATGN 61
Query: 82  XXXXXXXXXXXINNVNPSSFGDGLAFFISP-DNQI-LGS-AGGCLGLVNSSQLTKNKFVA 138
                      + ++      DG+ FFI+P D QI  GS  GG LG+  S       FV 
Sbjct: 62  VASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV--SDTKGAGHFVG 119
Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +  ++DP  +H+G+D++S++S+KT        +  SG V+   + Y +  + L
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-----WNSVSGAVVKVTVIYDSSTKTL 174
Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE-GSTELHMIQSWSFQTS 253
            V ++  N   +T + +V +DL   L   +  GFSAS   G  ++H+I+SWSF ++
Sbjct: 175 SVAVTNDN-GDITTIAQV-VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L     +
Sbjct: 16  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 75  E-PIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 128
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 225

>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 25  MNFDFTSFNLRN--ITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXX 81
           ++F+F SF+  N  I   GD + L NG I LT    V  +S G ++Y  PV  +      
Sbjct: 4   VSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKV--NSVGRVLYAMPVRIWSSATGN 61
Query: 82  XXXXXXXXXXXINNVNPSSFGDGLAFFISP-DNQI-LGS-AGGCLGLVNSSQLTKNKFVA 138
                      + ++      DG+ FFI+P D QI  GS  GG LG+  S       FV 
Sbjct: 62  VASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV--SDTKGAGHFVG 119
Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +  ++DP  +H+G+D++S++S+KT        +  SG V+   + Y +  + L
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-----WNSVSGAVVKVTVIYDSSTKTL 174
Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE-GSTELHMIQSWSFQTS 253
            V ++  N   +T + +V +DL   L   +  GFSAS   G  ++H+I+SWSF ++
Sbjct: 175 SVAVTNDN-GDITTIAQV-VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACLRHKN 405
           F   R LG+G FGNVY A    +  + A+K   +S+   EG + +   E+ I + LRH N
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           ++++  +  ++  + L+ E+ P G L    Y++ +             +  LA AL Y H
Sbjct: 77  ILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 466 QECEQQVIHRDIKASNIMLD-------ANFNARLES---SFTLTAGTMGYLAPEYLQYGT 515
              E++VIHRDIK  N+++        A+F   + +         GT+ YL PE ++  T
Sbjct: 133 ---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIE--RETEGHKMVNLVD 553
             EK D++  GV+  E   G  P +    TE H+ +  VD
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 229

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 36/237 (15%)
Query: 353 NRILGRGAFGNVYKAYFASSGS---VAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
            R++G G FG V        G      A+K  K  ++ + + +FL E SI+    H N+V
Sbjct: 48  ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            L G       +++V E+M NG+LD  L +      ++     + ++ G+A+ + YL   
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL--- 161
Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTM--GYLAPEYLQ 512
            +   +HRD+ A NI++++N   ++             E+ +T T G +   + APE +Q
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 513 YGTATEKTDVFSYGVVVLEV-ACGRRP---------IERETEGHKMVNLVDWVWGLY 559
           Y   T  +DV+SYG+V+ EV + G RP         I+   EG+++   +D   GL+
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLH 278

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 338 FSYRELRSATRGFHSN---------RILGRGAFGNVYKAYFASSGS---VAAVK--RSKH 383
           F++ +   A R F            +++G G FG V        G      A+K  ++ +
Sbjct: 10  FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 384 SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
           + + + +FL+E SI+    H N++ L G   +   ++++ EYM NGSLD  L ++     
Sbjct: 70  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------- 492
           ++     + ++ G+ S + YL    +   +HRD+ A NI++++N   ++           
Sbjct: 130 VI---QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 493 --ESSFTLTAGTMG--YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
             E+++T   G +   + APE + Y   T  +DV+SYG+V+ EV + G RP
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234

>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 25  MNFDFTSF-NLRNITLLGDSYL-RNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXXX 82
           ++F++T F +  ++   GD+ +  +G + +  +  V  ++S +L Y  PVP +D      
Sbjct: 1   VSFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHAL-YATPVPIWDSATGNV 59
Query: 83  XXXXXXXXXXINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSSQLTKNKFVAIE 140
                     ++NV      DG+ FF++P    +   S GG LG+ +SS  ++N+FVA+E
Sbjct: 60  ASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSSN-SQNQFVAVE 118
Query: 141 FDTRLDPHFDDPD---ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           FD+   P+  DP     +HIG+D++S+ S+K  +      +  SG++  A I Y +D ++
Sbjct: 119 FDSH--PNVWDPKSLRSSHIGIDVNSIMSLKAVN-----WNRVSGSLEKATIIYDSDTKI 171
Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-EGSTELHMIQSWSFQTSGFR 256
           L V M++ N +  T  +   IDL   L   + VGFSA+T     E H I SWSF ++   
Sbjct: 172 LTVVMTHQNGQITT--ISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTSTLKE 229
Query: 257 P 257
           P
Sbjct: 230 P 230

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACLRHKNLVQL 409
           R LG+G FGNVY A    +  + A+K   +S+   EG + +   E+ I + LRH N++++
Sbjct: 20  RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             +  ++  + L+ E+ P G L    Y++ +             +  LA AL Y H   E
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH---E 132
Query: 470 QQVIHRDIKASNIMLD-------ANFNARLES---SFTLTAGTMGYLAPEYLQYGTATEK 519
           ++VIHRDIK  N+++        A+F   + +         GT+ YL PE ++  T  EK
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 520 TDVFSYGVVVLEVACGRRPIE--RETEGHKMVNLVD 553
            D++  GV+  E   G  P +    TE H+ +  VD
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD 228

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 30  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 87
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 88  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 142
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNL 551
           +S+G+++ E+   GR P    T    + NL
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 23  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 81  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 135
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 232

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 22  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 79
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 80  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 134
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 231

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 79  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 85  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 139
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKN 405
           F   + +GRG F  VY+A     G   A+K+ +       + + + + E+ ++  L H N
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++      E  EL +V E    G L RM+    +   L+         V L SAL ++H
Sbjct: 94  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 466 QECEQQVIHRDIKASNIMLDAN-------------FNARLESSFTLTAGTMGYLAPEYLQ 512
               ++V+HRDIK +N+ + A              F+++  ++ +L  GT  Y++PE + 
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIH 209
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD-KR 571
                 K+D++S G ++ E+A  + P      G KM         LY+  + IE  D   
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKM--------NLYSLCKKIEQCDYPP 257
Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
           L      +E+++L+ +   C NPD   RP +  V+ +
Sbjct: 258 LPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDV 291

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 79  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 29  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 86
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 87  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 141
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNL 551
           +S+G+++ E+   GR P    T    + NL
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V E M NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY   +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 40  LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    +V EYMP G+L   L +   +    V+L     L +   ++SA+ YL +   +  
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYLEK---KNF 151
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y T + K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 212 SDVWAFGVLLWEIA 225

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 114/217 (52%), Gaps = 30/217 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L     +
Sbjct: 17  LGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 76  E-PIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 129
Query: 476 DIKASNIMLD-------ANFN-ARL--ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           +++A+NI++        A+F  ARL  ++ +T   G    + + APE + YGT T K+DV
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMV 549
           +S+G+++ E+   GR P         I+    G++MV
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 38/263 (14%)
Query: 353 NRILGRGAFGNVYKAYFASSGS---VAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
            R++G G FG V        G      A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 27  ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            L G   +   +++V EYM NGSLD  L ++     ++     + ++ G+++ + YL   
Sbjct: 87  HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYL--- 140
Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMG--YLAPEYLQ 512
            +   +HRD+ A NI++++N   ++             E+++T   G +   + APE + 
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 513 YGTATEKTDVFSYGVVVLEVAC-GRRP---------IERETEGHKMVNLVDWVWGLYAEG 562
           +   T  +DV+SYG+V+ EV   G RP         I+   EG+++ + +D    LY   
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQ-- 258
Query: 563 RIIEAADKRLNGAFNEDEMKRLL 585
            +++   K  N     DE+  +L
Sbjct: 259 LMLDCWQKERNSRPKFDEIVNML 281

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGS---VAAVK--RSKHSHEGKTE 390
           REF+ +E+ ++       +++G G FG V        G      A+K  ++ ++ + + +
Sbjct: 5   REFA-KEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
           FL+E SI+    H N++ L G   +   ++++ EYM NGSLD  L ++     ++     
Sbjct: 62  FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QL 118
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFT 497
           + ++ G+ S + YL    +   +HRD+ A NI++++N   ++             E+++T
Sbjct: 119 VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 498 LTAGT--MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
              G   + + APE + Y   T  +DV+SYG+V+ EV + G RP
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 27/207 (13%)
Query: 353 NRILGRGAFGNVYKAYFASSGS---VAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
            +++G G FG V        G      A+K  ++ ++ + + +FL+E SI+    H N++
Sbjct: 13  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            L G   +   ++++ EYM NGSLD  L ++     ++     + ++ G+ S + YL   
Sbjct: 73  HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS-- 127
Query: 468 CEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYLQ 512
            +   +HRD+ A NI++++N   ++             E+++T   G   + + APE + 
Sbjct: 128 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 513 YGTATEKTDVFSYGVVVLEV-ACGRRP 538
           Y   T  +DV+SYG+V+ EV + G RP
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERP 213

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 29/208 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGS---VAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           +++G G FG V   +    G      A+K  +S ++ + + +FL+E SI+    H N++ 
Sbjct: 13  QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G   +   ++++ E+M NGSLD  L Q+     ++     + ++ G+A+ + YL    
Sbjct: 73  LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---A 126
Query: 469 EQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMG-----YLAPEYL 511
           +   +HR + A NI++++N   ++             S  T T+   G     + APE +
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           QY   T  +DV+SYG+V+ EV + G RP
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERP 214

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V E M NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYL-- 163
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 265
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F     N+TL G + + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDST 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P         G LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           +A+EFDT  +P +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDAPSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L V + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ S
Sbjct: 178 ILHVVLVYPSSGAIYTIAEI-VDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 46/281 (16%)
Query: 353 NRILGRGAFGNVY--KAYFASSGSVA-AVKRSK--HSHEGKTEFLAELSIIACLRHKNLV 407
           ++++G G FG V   +    S   ++ A+K  K  ++ + + +FL E SI+    H N++
Sbjct: 21  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQ-DSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +L G   +   +++V E M NGSLD  L + D++  V+      + ++ G+AS + YL  
Sbjct: 81  RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIASGMKYLS- 135
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT--MGYLAPEYL 511
             +   +HRD+ A NI++++N   ++             E+++T   G   + + +PE +
Sbjct: 136 --DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            Y   T  +DV+SYG+V+ EV + G RP                 W +  +  +I+A D+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD-VIKAVDE 236
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D + RP   ++  IL+ 
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 341 RELRSATRGFHSNRI------LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLA 393
           RE     R    N +      LG GAFG VYKA    +G++AA K     S E   +++ 
Sbjct: 6   REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           E+ I+A   H  +V+LLG     G+L ++ E+ P G++D ++ +       L+      +
Sbjct: 66  EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVV 122
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------- 500
              +  AL +LH    +++IHRD+KA N+++    + RL + F ++A             
Sbjct: 123 CRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRL-ADFGVSAKNLKTLQKRDSFI 178
Query: 501 GTMGYLAPEYLQYGTATE-----KTDVFSYGVVVLEVA 533
           GT  ++APE +   T  +     K D++S G+ ++E+A
Sbjct: 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEG-KTEFLAELSIIACLRHKN 405
           F   R LG+G FGNVY A    S  + A+K   +S+   EG + +   E+ I A L H N
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++L  +  ++  + L+ EY P G L    Y++ +            I+  LA AL Y H
Sbjct: 85  ILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 466 QECEQQVIHRDIKASNI---------MLDANFNARLESSFTLT-AGTMGYLAPEYLQYGT 515
               ++VIHRDIK  N+         + D  ++    S    T  GT+ YL PE ++   
Sbjct: 141 G---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIE 540
             EK D++  GV+  E+  G  P E
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222

>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 126/247 (51%), Gaps = 25/247 (10%)
Query: 22  SNNMNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPASSS-GSLIYNNPVPFF 75
           +++++F F +F+   RN+   GD++  RN ++ LTR    G P  S+ G ++++  V  +
Sbjct: 9   TDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLW 68
Query: 76  DQEXXXXXXXXXXXXXXINN--VNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSSQL 131
           ++               +++   NP+   DG+AFFI+P +  +  GSAGG LGL N    
Sbjct: 69  EKSTNRVANLQTQFSFFLSSPLSNPA---DGIAFFIAPPDTTIPSGSAGGLLGLFNPRTA 125
Query: 132 ---TKNKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVIT 186
              + N+ +A+EFDT    + +  DP+  HIG+D++S+ S K         + + G  + 
Sbjct: 126 LNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVR-----WERREGKTLN 180
Query: 187 AWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQ 246
             + Y    R + V  +Y + +     L   +DL+  L   + VGFSA++    + H ++
Sbjct: 181 VLVTYNPSTRTIDVVATYPDGQRYQ--LSHVVDLTTILPEWVRVGFSAASGEQFQTHNLE 238
Query: 247 SWSFQTS 253
           SWSF ++
Sbjct: 239 SWSFTST 245

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 35  RNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXIN 94
           +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+E              IN
Sbjct: 16  QNLIFQGDGYTTKEKLTLTKAV---KNTVGRALYSSPIHIWDRETGNVANFVTSFTFVIN 72
Query: 95  NVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVAIEFDTRLDPHFDDPD 153
             N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA+EFDT  +  +D  +
Sbjct: 73  APNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSN 132
Query: 154 EN-HIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSN---LKP 209
            + HIG+D++S++S+ T    LQ  + +  NV+   I +     +L V ++Y N    + 
Sbjct: 133 RDRHIGIDVNSIKSVNTKSWKLQ--NGEEANVV---IAFNAATNVLTVSLTYPNNSLEEE 187
Query: 210 VTPL-LKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
           VT   L   + L   +   + +GFSA+T      H + SWSF +
Sbjct: 188 VTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHS 231

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  K     + +F+ E  ++  L H  LVQL G C E
Sbjct: 35  IGSGQFGLVHLGYWLNKDKVA-IKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G L +    L + + +   + YL + C   VIHR
Sbjct: 94  QAPICLVFEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 208 WSFGVLMWEVFSEGKIPYE 226

>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 18/241 (7%)
Query: 22  SNNMNFDFTSFNLRNITLL--GDSYLRN-GVIGLTREL-GVPASSS-GSLIYNNPVPFFD 76
           + +++F F  F      L+  GD+ + + GV+ LT  + GVP+S S G  +Y  P   +D
Sbjct: 1   TGSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWD 60
Query: 77  QEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISP-DNQILGSAGGCLGLVNSSQLTK-N 134
                           I   NP++  DGLAFF++P D Q L   GG LG+       K N
Sbjct: 61  STTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPL-DLGGMLGIFKDGYFNKSN 119
Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
           + VA+EFDT  +  + DP   H+G++++S+ESIKT        +  +G V   +I Y+  
Sbjct: 120 QIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVP-----WNWTNGEVANVFISYEAS 173
Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQ 251
            + L   + Y +L+  + ++   +D+   L   +  GFSA+T   +G  + + + SWSF+
Sbjct: 174 TKSLTASLVYPSLE-TSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFE 232
Query: 252 T 252
           +
Sbjct: 233 S 233

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +G++AA K     S E   +++ E+ I+A   H  +V+LLG   
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
             G+L ++ E+ P G++D ++ +       L+      +   +  AL +LH    +++IH
Sbjct: 79  HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHS---KRIIH 132
Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATE--- 518
           RD+KA N+++    + RL + F ++A             GT  ++APE +   T  +   
Sbjct: 133 RDLKAGNVLMTLEGDIRL-ADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 519 --KTDVFSYGVVVLEVA 533
             K D++S G+ ++E+A
Sbjct: 192 DYKADIWSLGITLIEMA 208

>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F     N+TL G S + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P        GG LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGGGYLGIFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           + +EFDT     +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LGVEFDT-FSNQWDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ S
Sbjct: 178 ILHAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 19/242 (7%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYL-RNGVIGLTR--ELGVPASSS-GSLIYNNPVPFF 75
           +N++ F FT F    +++   GD+ +  N  + LT+    G P   S G  +Y  P+  +
Sbjct: 1   ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLW 60
Query: 76  DQEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFI-SPDNQI-LGSAGGCLGLVNSSQ--L 131
            Q               I+    S+  D L FFI SPD +I  GS G  LGL  SS    
Sbjct: 61  -QSSSLVASFETTFTFSISQ-GSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAG 118
Query: 132 TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDY 191
           + N  V++EFDT  +    DP+  HIG+D++S+ S   +       D ++G   TA I Y
Sbjct: 119 SDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASK-----WDWQNGKTATAHISY 173
Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ 251
            +  + L V  SY N  PV  ++  +++L+      + VGFSA+T   T+ + I +WSF+
Sbjct: 174 NSASKRLSVVSSYPNSSPV--VVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFR 231
Query: 252 TS 253
           +S
Sbjct: 232 SS 233

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 30/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G  G V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L      
Sbjct: 21  LGAGQAGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  IHR
Sbjct: 79  QEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++        A+F  ARL      TA       + + APE + YGT T K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 523 FSYGVVVLEVAC-GRRP---------IERETEGHKMVN 550
           +S+G+++ E+   GR P         I+    G++MV 
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 231

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 25  MNFDFTSFNLRNITLLGDSYLRNGVIGLTRELG--VPASSS-GSLIYNNPVPFFDQEXXX 81
            +F F +FN  +  L GD+ + +  + LT+  G  +P  SS G   Y++P+  +D+    
Sbjct: 4   QSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGA 63
Query: 82  XXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN-KFVAIE 140
                      I   N SS  DG+AF + P      S  G LG+ +S     + + VA+E
Sbjct: 64  VASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVE 123
Query: 141 FDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKV 200
           FDT  +  +D P   HIG+D++S++SI+TA        L +G      I Y     +L  
Sbjct: 124 FDTFSNTDWD-PTSRHIGIDVNSIKSIRTA-----SWGLANGQNAEILITYNAATSLLVA 177
Query: 201 FMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
            + + + +  + ++   +D++  L   + +GFSA+T   EG TE H + SWSF +
Sbjct: 178 SLVHPSRR-TSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFAS 231

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++G G FG V +    + G   S  A+K  K  ++   + EFL+E SI+    H N+++L
Sbjct: 21  VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML-YQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
            G       ++++ E+M NG+LD  L   D +  V+      + ++ G+AS + YL    
Sbjct: 81  EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI----QLVGMLRGIASGMRYL---A 133
Query: 469 EQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAG---TMGYLAPEYL 511
           E   +HRD+ A NI++++N   ++              + ++T + G    + + APE +
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            +   T  +D +SYG+V+ EV + G RP                 W +  +  +I A ++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERP----------------YWDMSNQD-VINAIEQ 236
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D +ARP   +V   L+ 
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 277

>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 18/241 (7%)
Query: 24  NMNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQ 77
            ++F F+ F     N+TL G S + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D 
Sbjct: 3   TISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDM 62
Query: 78  EXXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNK 135
                          I          DGL FF+ P         G LG+ N S Q    +
Sbjct: 63  TTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNQSKQDNSYQ 122
Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            + +EFDT  +P +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    
Sbjct: 123 TLGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASS 176
Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           ++L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ 
Sbjct: 177 KLLHAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 253 S 253
           S
Sbjct: 236 S 236

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG-W 412
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 18  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVI 74
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL  + Y  S    +L     L   + +  A+ YL        
Sbjct: 75  VEEKGGLYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNF 129
Query: 473 IHRDIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++        ++F    E+S T   G +   + APE L+    + K+DV+
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 524 SYGVVVLEV-ACGRRPIER 541
           S+G+++ E+ + GR P  R
Sbjct: 190 SFGILLWEIYSFGRVPYPR 208

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 13  IGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G L +    L + + +   + YL + C   VIHR
Sbjct: 72  QAPICLVFEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 186 WSFGVLMWEVFSEGKIPYE 204

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G    +             +   EF+ E  I+A + H +LV
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN---GVLLSWYHRLNIVVGLASALTYL 464
           +LLG C     + LV + MP+G L   +++  +N    +LL+W       V +A  + YL
Sbjct: 81  RLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTM--GYLAPEY 510
               E++++HRD+ A N+++ +  + ++            E  +    G M   ++A E 
Sbjct: 134 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 511 LQYGTATEKTDVFSYGVVVLEV 532
           + Y   T ++DV+SYGV + E+
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWEL 212

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G    +             +   EF+ E  I+A + H +LV
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN---GVLLSWYHRLNIVVGLASALTYL 464
           +LLG C     + LV + MP+G L   +++  +N    +LL+W       V +A  + YL
Sbjct: 104 RLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTM--GYLAPEY 510
               E++++HRD+ A N+++ +  + ++            E  +    G M   ++A E 
Sbjct: 157 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 511 LQYGTATEKTDVFSYGVVVLEV 532
           + Y   T ++DV+SYGV + E+
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWEL 235

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G L +    L + + +   + YL + C   VIHR
Sbjct: 74  QAPICLVFEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 188 WSFGVLMWEVFSEGKIPYE 206

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 86  EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 137
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 198 SDVWAFGVLLWEIA 211

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 18  IGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G L +    L + + +   + YL + C   VIHR
Sbjct: 77  QAPICLVFEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 191 WSFGVLMWEVFSEGKIPYE 209

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 137
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 198 SDVWAFGVLLWEIA 211

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 134
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 195 SDVWAFGVLLWEIA 208

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 82  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 133
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 194 SDVWAFGVLLWEIA 207

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 85  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 136
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 197 SDVWAFGVLLWEIA 210

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 48/281 (17%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++G G FG V +    + G   S  A+K  K  ++   + EFL+E SI+    H N+++L
Sbjct: 23  VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML-YQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
            G       ++++ E+M NG+LD  L   D +  V+      + ++ G+AS + YL    
Sbjct: 83  EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI----QLVGMLRGIASGMRYL---A 135
Query: 469 EQQVIHRDIKASNIMLDANFNARLE-----------SSFTLTAGTMG------YLAPEYL 511
           E   +HRD+ A NI++++N   ++            SS      ++G      + APE +
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            +   T  +D +SYG+V+ EV + G RP                 W +  +  +I A ++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERP----------------YWDMSNQD-VINAIEQ 238
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                   D    L  + L C   D +ARP   +V   L+ 
Sbjct: 239 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 279

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 37/207 (17%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +LG+G FG   K     +G V  +K   +   E +  FL E+ ++ CL H N+++ +G  
Sbjct: 17  VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 414 AEKGELLLVYEYMPNGSLDRMLY-QDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +   L  + EY+  G+L  ++   DS+      W  R++    +AS + YLH      +
Sbjct: 77  YKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 473 IHRDIKASNIMLDANFN--------ARL-------------------ESSFTLTAGTMGY 505
           IHRD+ + N ++  N N        ARL                   +  +T+  G   +
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV-VGNPYW 188
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +APE +   +  EK DVFS+G+V+ E+
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 132
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 193 SDVWAFGVLLWEIA 206

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 137
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 198 SDVWAFGVLLWEIA 211

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 94  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 145
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 206 SDVWAFGVLLWEIA 219

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 132
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 193 SDVWAFGVLLWEIA 206

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 134
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 195 SDVWAFGVLLWEIA 208

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 79  EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 133
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            +FT  AG    + + APE L Y   + K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 194 WAFGVLLWEIA 204

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 82  EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 133
Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++        A+F  +RL +  T TA       + + APE L Y   + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 194 SDVWAFGVLLWEIA 207

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 134
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 195 SDVWAFGVLLWEIA 208

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQ---DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L   L +      N V+L     L +   ++SA+ YL +   +  
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 137
Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEK 519
           IHRD+ A N ++        A+F  +RL +  T TA       + + APE L Y   + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 198 SDVWAFGVLLWEIA 211

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG-W 412
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 12  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVI 68
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL  + Y  S    +L     L   + +  A+ YL        
Sbjct: 69  VEEKGGLYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNF 123
Query: 473 IHRDIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++        ++F    E+S T   G +   + APE L+    + K+DV+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 524 SYGVVVLEV-ACGRRPIER 541
           S+G+++ E+ + GR P  R
Sbjct: 184 SFGILLWEIYSFGRVPYPR 202

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG-W 412
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 27  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVI 83
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL  + Y  S    +L     L   + +  A+ YL        
Sbjct: 84  VEEKGGLYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNF 138
Query: 473 IHRDIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++        ++F    E+S T   G +   + APE L+    + K+DV+
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 524 SYGVVVLEV-ACGRRPIER 541
           S+G+++ E+ + GR P  R
Sbjct: 199 SFGILLWEIYSFGRVPYPR 217

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 19  LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 79  EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++        A+F  +RL +  T TA       + + APE L Y   + K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 194 WAFGVLLWEIA 204

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+ +S  VA VK  K        FL E +++  L+H  LV+L      
Sbjct: 21  LGAGQFGEVWMGYYNNSTKVA-VKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM  GSL   L  D    VLL     ++    +A  + Y+ +   +  IHR
Sbjct: 80  EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNYIHR 134
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+N+++  +   ++          ++ +T   G    + + APE + +G  T K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNL 551
           +S+G+++ E+   G+ P    T    M  L
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNADVMTAL 224

>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F     N+TL G + + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P         G LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           + +EFDT  +P +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ S
Sbjct: 178 ILHAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG-W 412
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 199 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVI 255
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL  + Y  S    +L     L   + +  A+ YL        
Sbjct: 256 VEEKGGLYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNF 310
Query: 473 IHRDIKASNIMLD-------ANFNARLESSFTLTAGTM--GYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++        ++F    E+S T   G +   + APE L+    + K+DV+
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 524 SYGVVVLEV-ACGRRPIER 541
           S+G+++ E+ + GR P  R
Sbjct: 371 SFGILLWEIYSFGRVPYPR 389

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           + LG G+FG V  AY  ++G   A+K       +K   +G+ E   E+S +  LRH +++
Sbjct: 10  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 67
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K E+++V EY  N   D ++ +D      +S          + SA+ Y H+ 
Sbjct: 68  KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR- 121
Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT- 515
              +++HRD+K  N++LD + N ++          + +F  T+ G+  Y APE +     
Sbjct: 122 --HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET 543
           A  + DV+S GV++  + C R P + E+
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDES 207

>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F     N+TL G + + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P         G LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           + +EFDT  +P +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ S
Sbjct: 178 ILHAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           + LG G+FG V  AY  ++G   A+K       +K   +G+ E   E+S +  LRH +++
Sbjct: 20  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 77
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K E+++V EY  N   D ++ +D      +S          + SA+ Y H+ 
Sbjct: 78  KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR- 131
Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT- 515
              +++HRD+K  N++LD + N ++          + +F  T+ G+  Y APE +     
Sbjct: 132 --HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET 543
           A  + DV+S GV++  + C R P + E+
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDES 217

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           + LG G+FG V  AY  ++G   A+K       +K   +G+ E   E+S +  LRH +++
Sbjct: 14  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 71
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K E+++V EY  N   D ++ +D      +S          + SA+ Y H+ 
Sbjct: 72  KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR- 125
Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT- 515
              +++HRD+K  N++LD + N ++          + +F  T+ G+  Y APE +     
Sbjct: 126 --HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET 543
           A  + DV+S GV++  + C R P + E+
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDES 211

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 81  EPPFYIIIEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 135
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 196 WAFGVLLWEIA 206

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           + LG G+FG V  AY  ++G   A+K       +K   +G+ E   E+S +  LRH +++
Sbjct: 19  KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 76
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K E+++V EY  N   D ++ +D      +S          + SA+ Y H+ 
Sbjct: 77  KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR- 130
Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT- 515
              +++HRD+K  N++LD + N ++          + +F  T+ G+  Y APE +     
Sbjct: 131 --HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERET 543
           A  + DV+S GV++  + C R P + E+
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDES 216

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 81  EPPFYIIIEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 135
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 196 WAFGVLLWEIA 206

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 81  EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 135
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 196 WAFGVLLWEIA 206

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 81  EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 135
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 196 WAFGVLLWEIA 206

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 86  EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 140
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 201 WAFGVLLWEIA 211

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 16  IGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV E+M +G L    Y  ++ G L +    L + + +   + YL + C   VIHR
Sbjct: 75  QAPICLVTEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 189 WSFGVLMWEVFSEGKIPYE 207

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 79  EPPFYIIIEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 133
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++        A+F  +RL +  T TA       + + APE L Y   + K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 194 WAFGVLLWEIA 204

>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNL--RNITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F     N+TL G S + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P         G LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           + +EFDT     +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LGVEFDT-FSNQWDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSFQ S
Sbjct: 178 LLHAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C E
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + LV+E+M +G L    Y  ++ G L +    L + + +   + YL    E  VIHR
Sbjct: 74  QAPICLVFEFMEHGCLSD--YLRTQRG-LFAAETLLGMCLDVCEGMAYLE---EASVIHR 127
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++  N   +          L+  +T + GT   + + +PE   +   + K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 523 FSYGVVVLEV-ACGRRPIE 540
           +S+GV++ EV + G+ P E
Sbjct: 188 WSFGVLMWEVFSEGKIPYE 206

>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 25  MNFDFTSFNLRN--ITLLGDSYL-RNGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQE 78
           ++F F+ F   N  +TL G + + ++GV+ LT+  + G+PA  S+G  +Y  PV  +D  
Sbjct: 4   ISFSFSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMT 63
Query: 79  XXXXXXXXXXXXXXINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNKF 136
                         I          DGL FF+ P         G LG+ N+S Q    + 
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQT 123
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           +A+EFDT  +P +D P   HIG+D++S+ SIKT     Q   L +G V    I Y    +
Sbjct: 124 LAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKT-----QPFQLDNGQVANVVIKYDASSK 177
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           +L   + Y +   +  + ++ +D+   L   + VG S +T     + E H + SWSF  S
Sbjct: 178 ILLAVLVYPSSGAIYTIAEI-VDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFHAS 236

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 24/194 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 416 KGELLLVYEYMPNGSL---DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
           +    ++ E+M  G+L    R   +   N V+L     L +   ++SA+ YL +   +  
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK---KNF 378
Query: 473 IHRDIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHR++ A N ++  N   ++            ++T  AG    + + APE L Y   + K
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 520 TDVFSYGVVVLEVA 533
           +DV+++GV++ E+A
Sbjct: 439 SDVWAFGVLLWEIA 452

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 28/227 (12%)
Query: 333 PGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV---AAVK--RSKHSHEG 387
           PG    S+     A+R  H  +I+G G  G V        G      A+K  ++ ++   
Sbjct: 35  PGRAGRSFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 388 KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           + +FL+E SI+    H N+++L G        ++V EYM NGSLD  L        ++  
Sbjct: 94  RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ES 494
              + ++ G+ + + YL    +   +HRD+ A N+++D+N   ++             ++
Sbjct: 154 ---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 495 SFTLTAGT--MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++T T G   + + APE + + T +  +DV+S+GVV+ EV A G RP
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL  + +   E G  L     +++   +AS + Y+ +      +HR
Sbjct: 334 E-PIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 448 WSFGILLTELTTKGRVP 464

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 19  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 78  E-PIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 131
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 192 WSFGILLTELTTKGRVP 208

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K  +     FL E  ++  LRH+ LVQL    +E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVA-IKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 252 E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 366 WSFGILLTELTTKGRVP 382

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 251 E-PIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 251 E-PIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C  
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +    ++ E+M  G+L  + Y    N   +S    L +   ++SA+ YL +   +  IHR
Sbjct: 288 EPPFYIITEFMTYGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 342
Query: 476 DIKASNIMLDANFNARLE----------SSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           ++ A N ++  N   ++            ++T  AG    + + APE L Y   + K+DV
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 523 FSYGVVVLEVA 533
           +++GV++ E+A
Sbjct: 403 WAFGVLLWEIA 413

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +GRG FG V+     +  ++ AVK  + +   + K +FL E  I+    H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +K  + +V E +  G  D + +  +E G  L     L +V   A+ + YL  +C    I
Sbjct: 182 TQKQPIYIVMELVQGG--DFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 474 HRDIKASNIMLD-------ANFNARLESSFTLTAGTMG-------YLAPEYLQYGTATEK 519
           HRD+ A N ++        ++F    E +  + A + G       + APE L YG  + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 520 TDVFSYGVVVLEV 532
           +DV+S+G+++ E 
Sbjct: 296 SDVWSFGILLWET 308

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 17  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 76  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 190 WSFGILLTELTTKGRVP 206

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
            + LG G FG V+ A +     VA VK  K        FLAE +++  L+H  LV+L   
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 244
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              K  + ++ E+M  GSL   L  D  +   L     ++    +A  + ++ Q   +  
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNY 299
Query: 473 IHRDIKASNIMLDANFNARLESSFTLTAGT---MGYLAPEYLQYGTATEKTDVFSYGVVV 529
           IHRD++A+NI++ A+   ++        G    + + APE + +G+ T K+DV+S+G+++
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 530 LEVAC-GRRP 538
           +E+   GR P
Sbjct: 360 MEIVTYGRIP 369

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 251 E-PIYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 15  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 74  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 188 WSFGILLTELTTKGRVP 204

>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 18/244 (7%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRN-GVIGLTR-ELGVPASSS-GSLIYNNPVPFFD 76
           S+ ++F   +F  N  ++   G++ + + GV+ LT+ E G P   S G  +Y  PV  + 
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60
Query: 77  QEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISP-DNQI-LGSAGGCLGL-VNSSQLTK 133
                           +   NP    DGLAF+++P D+QI  GS    LGL  NS+  + 
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSS 120
Query: 134 NKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDY 191
           N+ VA+EFDT     +D  DP+  HIG+D++ +ESIKT        D  +G V  A I Y
Sbjct: 121 NQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQ-----WDWINGGVAFATITY 175
Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTEL--HMIQSWS 249
               + L   + Y + +  T  +  ++DL   L   + VGFSA+T   TE+  H + SWS
Sbjct: 176 LAPNKTLIASLVYPSNQ-TTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS 234
Query: 250 FQTS 253
           F ++
Sbjct: 235 FTST 238

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 28/227 (12%)
Query: 333 PGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV---AAVK--RSKHSHEG 387
           PG    S+     A+R  H  +I+G G  G V        G      A+K  ++ ++   
Sbjct: 35  PGRAGRSFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 388 KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           + +FL+E SI+    H N+++L G        ++V EYM NGSLD  L        ++  
Sbjct: 94  RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ES 494
              + ++ G+ + + YL    +   +HRD+ A N+++D+N   ++             ++
Sbjct: 154 ---VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 495 SFTLTAGT--MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + T T G   + + APE + + T +  +DV+S+GVV+ EV A G RP
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254

>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRN-GVIGLTRELGVPASSSGSL---IYNNPVPFFDQ 77
           SN++ F+F  FN  N+ L  D+ + + G + LT   G      GSL    Y+ P+  +D 
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60
Query: 78  EXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFV 137
                          I   N +   DGLAF + P        GG LGL + S  +    V
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSN-SNFHTV 119
Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  +D P E HIG+D++S+ SIKT        D  +G      I Y +   +
Sbjct: 120 AVEFDTLYNKDWD-PTERHIGIDVNSIRSIKTTR-----WDFVNGENAEVLITYDSSTNL 173
Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           L   + Y + K  + ++   +DL   L   + VGFSA+T   +G+ E + + SWSF +
Sbjct: 174 LVASLVYPSQK-TSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFAS 230

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 82  E-PIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 196 WSFGILLTELTTKGRVP 212

>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 15/238 (6%)
Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRN-GVIGLTRELGVPASSSGSL---IYNNPVPFFDQ 77
           SN++ F+F  FN  N+ L  D+ + + G + LT   G      GSL    Y+ P+  +D 
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60
Query: 78  EXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFV 137
                          I   N +   DGLAF + P        GG LGL + S  +    V
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSN-SNFHTV 119
Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  +D P E HIG+D++S+ SIKT        D  +G      I Y +   +
Sbjct: 120 AVEFDTLYNKDWD-PTERHIGIDVNSIRSIKTTR-----WDFVNGENAEVLITYDSSTNL 173
Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           L   + Y + K  + ++   +DL   L   + VGFSA+T   +G+ E + + SWSF +
Sbjct: 174 LVASLVYPSQK-TSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFAS 230

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+ A +     VA VK  K        FLAE +++  L+H  LV+L      
Sbjct: 23  LGAGQFGEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K  + ++ E+M  GSL   L  D  +   L     ++    +A  + ++ Q   +  IHR
Sbjct: 81  KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 135
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++ A+   ++          ++ +T   G    + + APE + +G+ T K+DV
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G++++E+   GR P
Sbjct: 196 WSFGILLMEIVTYGRIP 212

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 16  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL  + +   E G  L     +++   +AS + Y+ +      +HR
Sbjct: 75  E-PIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 128
Query: 476 DIKASNIMLDANFN--------ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N          ARL      TA       + + APE   YG  T K+DV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 189 WSFGILLTELTTKGRVP 205

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +GRG FG V+     +  ++ AVK  + +   + K +FL E  I+    H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +K  + +V E +  G  D + +  +E G  L     L +V   A+ + YL  +C    I
Sbjct: 182 TQKQPIYIVMELVQGG--DFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 474 HRDIKASNIMLD-------ANFNARLESSFTLTAGTMG-------YLAPEYLQYGTATEK 519
           HRD+ A N ++        ++F    E +  + A + G       + APE L YG  + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 520 TDVFSYGVVVLEV 532
           +DV+S+G+++ E 
Sbjct: 296 SDVWSFGILLWET 308

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+  Y+ +S  VA VK  K        FL E +++  L+H  LV+L     +
Sbjct: 20  LGAGQFGEVWMGYYNNSTKVA-VKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ E+M  GSL   L  D    VLL     ++    +A  + Y+ +   +  IHR
Sbjct: 79  EEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNYIHR 133
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+N+++  +   ++          ++ +T   G    + + APE + +G  T K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 523 FSYGVVVLEVAC-GRRPIERETEGHKMVNL 551
           +S+G+++ E+   G+ P    T    M  L
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVMSAL 223

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 82  E-PIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 196 WSFGILLTELTTKGRVP 212

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  +RH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 22  SNNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTR--ELGVPA-SSSGSLIYNNPVPFFDQ 77
           + + NFD    N + + L   + ++ NGV+ LT+  + GVP   S+G  +Y  P+  +D 
Sbjct: 2   TQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDS 61
Query: 78  EXXXXXXXXXXXXXXINNVNPSSF---GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN 134
                          I    P ++    DGL FF+ P N   G  GG LG+    +   N
Sbjct: 62  TTGNVASFETRFSFNI--TQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPPE-GDN 118
Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
            F A+EFDT  +    DP   HIG+D++S+ S KT         L++G V    I Y + 
Sbjct: 119 AF-AVEFDTFQNTW--DPQVPHIGIDVNSIVSSKTLH-----FQLENGGVANVVIKYDSP 170
Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMY--VGFSAST---EGSTELHMIQSWS 249
            ++L V +++ ++  V  L  + +DL      + +  VG SA+T   + + E H I SWS
Sbjct: 171 TKILNVVLAFHSVGTVYTLSNI-VDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWS 229
Query: 250 FQTS 253
           F +S
Sbjct: 230 FTSS 233

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 47/230 (20%)
Query: 343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR 402
           LR A+  F    +LG+GAFG V KA  A      A+K+ +H+ E  +  L+E+ ++A L 
Sbjct: 2   LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 403 H-------------KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           H             +N V+ +    +K  L +  EY  NG+L  +++ ++ N     ++ 
Sbjct: 61  HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------- 492
               ++    AL+Y+H    Q +IHRD+K  NI +D + N ++                 
Sbjct: 121 LFRQIL---EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 493 ---------ESSFTLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLEV 532
                      + T   GT  Y+A E L   G   EK D++S G++  E+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
            + LG G FG V+ A +     VA VK  K        FLAE +++  L+H  LV+L   
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 250
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              K  + ++ E+M  GSL   L  D  +   L     ++    +A  + ++ Q   +  
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNY 305
Query: 473 IHRDIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEK 519
           IHRD++A+NI++ A+   ++          ++ +T   G    + + APE + +G+ T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 520 TDVFSYGVVVLEVAC-GRRP 538
           +DV+S+G++++E+   GR P
Sbjct: 366 SDVWSFGILLMEIVTYGRIP 385

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 36  NITLLGDSYL-RNGVIGLTR--ELGVPASSS-GSLIYNNPVPFFDQEXXXXXXXXXXXXX 91
           N+ L GD+ +  +G + L +  E G P  SS G  +Y+ P+  +D+E             
Sbjct: 17  NMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNF 76
Query: 92  XINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDD 151
                +     DGLAFF++P +    +  G LGL N ++ + ++ VA+EFDT  +    D
Sbjct: 77  TFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENE-SGDQVVAVEFDTFRNSW--D 133
Query: 152 PDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVT 211
           P   HIG++++S+ SIKT        DL +  V    I Y     +L   + Y + +  +
Sbjct: 134 PPNPHIGINVNSIRSIKTT-----SWDLANNKVAKVLITYDASTSLLVASLVYPSQR-TS 187
Query: 212 PLLKVNIDLSGYLKGNMYVGFSAST--EGSTELHMIQSWSFQT 252
            +L   +DL   L   + +GFSA+T  +   E H + SWSF +
Sbjct: 188 NILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFAS 230

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL  + +   E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFN--------ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N          ARL      TA       + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  G L   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    +E
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  G L   L    E G  L     +++   +AS + Y+ +      +HR
Sbjct: 85  E-PIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 476 DIKASNIMLDANFNARL----------ESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D++A+NI++  N   ++          ++ +T   G    + + APE   YG  T K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 523 FSYGVVVLEVAC-GRRP 538
           +S+G+++ E+   GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 28/204 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWC 413
           +LG+G +G VY     S+    A+K         ++ L  E+++   L+HKN+VQ LG  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQD----SENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +E G + +  E +P GSL  +L        +N   + +Y +      +   L YLH   +
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLH---D 140
Query: 470 QQVIHRDIKASNIML----------DANFNARLESSFTLT---AGTMGYLAPEYLQYGTA 516
            Q++HRDIK  N+++          D   + RL      T    GT+ Y+APE +  G  
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 517 --TEKTDVFSYGVVVLEVACGRRP 538
              +  D++S G  ++E+A G+ P
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 28/204 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWC 413
           +LG+G +G VY     S+    A+K         ++ L  E+++   L+HKN+VQ LG  
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQD----SENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +E G + +  E +P GSL  +L        +N   + +Y +      +   L YLH   +
Sbjct: 75  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLH---D 126
Query: 470 QQVIHRDIKASNIML----------DANFNARLESSFTLT---AGTMGYLAPEYLQYGTA 516
            Q++HRDIK  N+++          D   + RL      T    GT+ Y+APE +  G  
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 517 --TEKTDVFSYGVVVLEVACGRRP 538
              +  D++S G  ++E+A G+ P
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 353 NRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNL 406
            R LG GAFG V+ A            + AVK  K  S   + +F  E  ++  L+H+++
Sbjct: 18  KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL---------LSWYHRLNIVVGL 457
           V+  G C E   L++V+EYM +G L++ L     + VL         L+    L+I   +
Sbjct: 78  VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--- 503
           A+ + YL     Q  +HRD+   N ++  N   ++              + +   TM   
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
            ++ PE + Y   T ++DV+S GVV+ E+   G++P
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           +   R+LG+G+FG V       +G   AVK    R       K   L E+ ++  L H N
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +KG   LV E    G L D ++ +        S      I+  + S +TY+
Sbjct: 88  IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYM 142
Query: 465 HQECEQQVIHRDIKASNIML-----DAN-------FNARLESSFTL--TAGTMGYLAPEY 510
           H+    +++HRD+K  N++L     DAN        +   E+S  +    GT  Y+APE 
Sbjct: 143 HK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L +GT  EK DV+S GV++  +  G  P
Sbjct: 200 L-HGTYDEKCDVWSTGVILYILLSGCPP 226

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 27/263 (10%)
Query: 319 KNMRTGICLRADLVPGPREFSYREL---RSATRGFHS---NRILGRGAFGNVYKAYFASS 372
           K+ RT   L  D+   P  F +R +   + A   F++     ILG G FG V+K    ++
Sbjct: 55  KSKRTS-ALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETAT 113
Query: 373 GSVAAVKRSK-HSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL 431
           G   A K  K    + K E   E+S++  L H NL+QL      K +++LV EY+  G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM-------- 483
              +  +S N   L+    +  +  +   + ++HQ     ++H D+K  NI+        
Sbjct: 174 FDRIIDESYN---LTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQ 227
Query: 484 ---LDANFNARLESSFTLTA--GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
              +D     R +    L    GT  +LAPE + Y   +  TD++S GV+   +  G  P
Sbjct: 228 IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
Query: 539 IERETEGHKMVNLVDWVWGLYAE 561
              + +   + N++   W L  E
Sbjct: 288 FLGDNDAETLNNILACRWDLEDE 310

>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 137 VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLR 196
           VA+EFDT L+P + DP+  HIG+D++S+ S  TA       D ++G + TA I Y +  +
Sbjct: 4   VAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAK-----WDWQNGKIATAHISYNSVSK 58
Query: 197 MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSGFR 256
            L V   Y+  KP T  L  +I+L   L   + VG SAST    E + + SWSF +S + 
Sbjct: 59  RLSVTSYYAGSKPAT--LSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSLWT 116
Query: 257 PVRPK 261
            V  K
Sbjct: 117 NVAKK 121

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           +   R+LG+G+FG V       +G   AVK    R       K   L E+ ++  L H N
Sbjct: 52  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +KG   LV E    G L D ++ +        S      I+  + S +TY+
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYM 166
Query: 465 HQECEQQVIHRDIKASNIML-----DAN-------FNARLESSFTL--TAGTMGYLAPEY 510
           H+    +++HRD+K  N++L     DAN        +   E+S  +    GT  Y+APE 
Sbjct: 167 HK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L +GT  EK DV+S GV++  +  G  P
Sbjct: 224 L-HGTYDEKCDVWSTGVILYILLSGCPP 250

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 26/197 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +  +AA K     S E   +++ E+ I+A   H N+V+LL    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA-SALTYLHQECEQQVI 473
            +  L ++ E+   G++D ++ +  E  +  S   ++ +V      AL YLH   + ++I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-LERPLTES---QIQVVCKQTLDALNYLH---DNKII 157
Query: 474 HRDIKASNIM--LD-----ANFNARLESSFTLT-----AGTMGYLAPEYLQYGTATE--- 518
           HRD+KA NI+  LD     A+F    +++ T+       GT  ++APE +   T+ +   
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 519 --KTDVFSYGVVVLEVA 533
             K DV+S G+ ++E+A
Sbjct: 218 DYKADVWSLGITLIEMA 234

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 28/198 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +  +AA K     S E   +++ E+ I+A   H N+V+LL    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA-SALTYLHQECEQQVI 473
            +  L ++ E+   G++D ++ +  E  +  S   ++ +V      AL YLH   + ++I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-LERPLTES---QIQVVCKQTLDALNYLH---DNKII 157
Query: 474 HRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATE-- 518
           HRD+KA NI+   + + +L + F ++A             GT  ++APE +   T+ +  
Sbjct: 158 HRDLKAGNILFTLDGDIKL-ADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 519 ---KTDVFSYGVVVLEVA 533
              K DV+S G+ ++E+A
Sbjct: 217 YDYKADVWSLGITLIEMA 234

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 28/198 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG VYKA    +  +AA K     S E   +++ E+ I+A   H N+V+LL    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA-SALTYLHQECEQQVI 473
            +  L ++ E+   G++D ++ +  E  +  S   ++ +V      AL YLH   + ++I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-LERPLTES---QIQVVCKQTLDALNYLH---DNKII 157
Query: 474 HRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATE-- 518
           HRD+KA NI+   + + +L + F ++A             GT  ++APE +   T+ +  
Sbjct: 158 HRDLKAGNILFTLDGDIKL-ADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 519 ---KTDVFSYGVVVLEVA 533
              K DV+S G+ ++E+A
Sbjct: 217 YDYKADVWSLGITLIEMA 234

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           +   R+LG+G+FG V       +G   AVK    R       K   L E+ ++  L H N
Sbjct: 51  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +KG   LV E    G L D ++ +        S      I+  + S +TY+
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYM 165
Query: 465 HQECEQQVIHRDIKASNIML-----DAN-------FNARLESSFTL--TAGTMGYLAPEY 510
           H+    +++HRD+K  N++L     DAN        +   E+S  +    GT  Y+APE 
Sbjct: 166 HK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L +GT  EK DV+S GV++  +  G  P
Sbjct: 223 L-HGTYDEKCDVWSTGVILYILLSGCPP 249

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQL---- 409
           LG G FG V +     +G   A+K+ +   S + +  +  E+ I+  L H N+V      
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 410 --LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
             L   A     LL  EY   G L + L Q  EN   L       ++  ++SAL YLH  
Sbjct: 82  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDISSALRYLH-- 138
Query: 468 CEQQVIHRDIKASNIML------------DANFNARLESSFTLT--AGTMGYLAPEYLQY 513
            E ++IHRD+K  NI+L            D  +   L+     T   GT+ YLAPE L+ 
Sbjct: 139 -ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 197
Query: 514 GTATEKTDVFSYGVVVLEVACGRRP 538
              T   D +S+G +  E   G RP
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRP 222

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           +   R+LG+G+FG V       +G   AVK    R       K   L E+ ++  L H N
Sbjct: 34  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +KG   LV E    G L D ++ +        S      I+  + S +TY+
Sbjct: 94  IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYM 148
Query: 465 HQECEQQVIHRDIKASNIML-----DAN-------FNARLESSFTL--TAGTMGYLAPEY 510
           H+    +++HRD+K  N++L     DAN        +   E+S  +    GT  Y+APE 
Sbjct: 149 HK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 205
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L +GT  EK DV+S GV++  +  G  P
Sbjct: 206 L-HGTYDEKCDVWSTGVILYILLSGCPP 232

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQL---- 409
           LG G FG V +     +G   A+K+ +   S + +  +  E+ I+  L H N+V      
Sbjct: 23  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 410 --LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
             L   A     LL  EY   G L + L Q  EN   L       ++  ++SAL YLH  
Sbjct: 83  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDISSALRYLH-- 139
Query: 468 CEQQVIHRDIKASNIML------------DANFNARLESSFTLT--AGTMGYLAPEYLQY 513
            E ++IHRD+K  NI+L            D  +   L+     T   GT+ YLAPE L+ 
Sbjct: 140 -ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 198
Query: 514 GTATEKTDVFSYGVVVLEVACGRRP 538
              T   D +S+G +  E   G RP
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRP 223

>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y   G + LT+ +    S+ G  +Y+ P+  +D++ 
Sbjct: 1   TETTSFSITKFSPDQQNLIFQGDGYTTKGKLTLTKAV---KSTVGRALYSTPIHIWDRDT 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        I+  +  +  DG  FFI+P +    + GG LG+ NS +  K ++ VA
Sbjct: 58  GNVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVA 117
Query: 139 IEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + E HIG+D++S++S+ T     +  +L++G      I +     +
Sbjct: 118 VEFDTFYNAAWDPSNKERHIGIDVNSIKSVNT-----KSWNLQNGERANVVIAFNAATNV 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVTLTYPN 181

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+         R LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 7   PTQFEERHLKFL-------RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ E++P GSL   L +  E    +  
Sbjct: 60  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDH 116
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 117 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 172
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 233 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 279
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 280 PSFRDLALRVDQIRDNMA 297

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 4   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 113
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 114 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 169
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 230 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 276
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 277 PSFRDLALRVDQIRDNMA 294

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 4   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 113
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 114 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 169
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 230 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 276
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 277 PSFRDLALRVDQIRDNMA 294

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L +             L +   +  A+ YL     +Q +HR
Sbjct: 91  QRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFT 226

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 11  PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 63
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 64  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 120
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 121 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 176
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 177 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 236
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 237 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 283
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 284 PSFRDLALRVDQIRDNMA 301

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 10  PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 62
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 63  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 119
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 120 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 175
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 176 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 235
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 236 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 282
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 283 PSFRDLALRVDQIRDNMA 300

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 8   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 60
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 61  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 117
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 118 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 173
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 174 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 233
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 234 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 280
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 281 PSFRDLALRVDQIRDNMA 298

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 7   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 60  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 116
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 117 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 172
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 233 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 279
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 280 PSFRDLALRVDQIRDNMA 297

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 3   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 55
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 56  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 112
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 113 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 168
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 169 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 228
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 229 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 275
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 276 PSFRDLALRVDQIRDNMA 293

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 16  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L    E          L +   +  A+ YL     +Q +HR
Sbjct: 75  QRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 128
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++     +          L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 189 WAFGVLMWEIYSLGKMPYERFT 210

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 9   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 61
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 62  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 118
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 119 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 174
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 175 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 234
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 235 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 281
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 282 PSFRDLALRVDQIRDNMA 299

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 4   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 113
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 114 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 169
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 230 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 276
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 277 PSFRDLALRVDQIRDNMA 294

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L    E          L +   +  A+ YL     +Q +HR
Sbjct: 71  QRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 124
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFT 206

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 47/230 (20%)
Query: 343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR 402
           LR A+  F    +LG+GAFG V KA  A      A+K+ +H+ E  +  L+E+ ++A L 
Sbjct: 2   LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 403 H-------------KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           H             +N V+ +    +K  L +  EY  N +L  +++ ++ N     ++ 
Sbjct: 61  HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------- 492
               ++    AL+Y+H    Q +IHRD+K  NI +D + N ++                 
Sbjct: 121 LFRQIL---EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 493 ---------ESSFTLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLEV 532
                      + T   GT  Y+A E L   G   EK D++S G++  E+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 23  NNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTR--ELGVP-ASSSGSLIYNNPVPFFDQ 77
           ++++F F +F  + +N+   GD+ ++N  + LT+    G P AS+ G ++++  V  +++
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 78  EXXXXXXXXXXXXXXINNVNPSSFG-DGLAFFISPDNQIL-----GSAGGCLGLVNSSQL 131
                          + +  P S G DG+AFFI+P +  +     G   G      +   
Sbjct: 62  SSSRVANFQSQFSFSLKS--PLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNT 119
Query: 132 TKNKFVAIEFDT--RLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWI 189
           + N+ +A+EFDT    D +  DP+  HIG+D++S+ S+KT        D + G  +   +
Sbjct: 120 SANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK-----WDRRDGQSLNVLV 174
Query: 190 DYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWS 249
            +    R L V  +YS+       +   +D+   L   + VGFSA++    + H ++SWS
Sbjct: 175 TFNPSTRNLDVVATYSDGTRYE--VSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWS 232
Query: 250 FQTS 253
           F ++
Sbjct: 233 FTST 236

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 17  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L    E          L +   +  A+ YL     +Q +HR
Sbjct: 76  QRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFT 211

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 23  NNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTR--ELGVP-ASSSGSLIYNNPVPFFDQ 77
           ++++F F +F  + +N+   GD+ ++N  + LT+    G P AS+ G ++++  V  +++
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 78  EXXXXXXXXXXXXXXINNVNPSSFG-DGLAFFISPDNQIL-----GSAGGCLGLVNSSQL 131
                          + +  P S G DG+AFFI+P +  +     G   G      +   
Sbjct: 62  SSSRVANFQSQFSFSLKS--PLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNT 119
Query: 132 TKNKFVAIEFDT--RLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWI 189
           + N+ +A+EFDT    D +  DP+  HIG+D++S+ S+KT        D + G  +   +
Sbjct: 120 SANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK-----WDRRDGQSLNVLV 174
Query: 190 DYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWS 249
            +    R L V  +YS+       +   +D+   L   + VGFSA++    + H ++SWS
Sbjct: 175 TFNPSTRNLDVVATYSDGTRYE--VSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWS 232
Query: 250 FQTS 253
           F ++
Sbjct: 233 FTST 236

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 353 NRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNL 406
            R LG GAFG V+ A            + AVK  K  +   + +F  E  ++  L+H+++
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRLNIV 454
           V+  G C +   L++V+EYM +G L++ L     + ++            L     L+I 
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM 503
             +AS + YL     Q  +HRD+   N ++ AN   ++              + +   TM
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 504 ---GYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
               ++ PE + Y   T ++DV+S+GV++ E+   G++P
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 23  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L +             L +   +  A+ YL     +Q +HR
Sbjct: 82  QRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHR 135
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 196 WAFGVLMWEIYSLGKMPYERFT 217

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 17  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L    E          L +   +  A+ YL     +Q +HR
Sbjct: 76  QRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+  +T + G+   + +  PE L Y   + K+D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFT 211

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 7   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L   +E    +  
Sbjct: 60  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDH 116
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 117 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 172
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 233 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 279
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 280 PSFRDLALRVDQIRDNMA 297

>pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 59/297 (19%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G V AVK+ +HS E    +F  E+ I+  L+H N+V+  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 411 GWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G C   G   L L+ EY+P GSL   L +  E    +     L     +   + YL    
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---G 149
Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLTA----------------GTMGYLAPEYLQ 512
            ++ IHRD+   NI+++     ++   F LT                   + + APE L 
Sbjct: 150 TKRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 513 YGTATEKTDVFSYGVVVLEV-----------ACGRRPIERETEGHKMV-NLVDWVWGLYA 560
               +  +DV+S+GVV+ E+           A   R I  + +G  +V +L++    L  
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL---LKN 265
Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR----RVFQILNNEA 613
            GR+      R +G  +E     + ++   C N + + RPS R    RV QI +N A
Sbjct: 266 NGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312

>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+E 
Sbjct: 1   TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAV---KNTVGRALYSSPIHIWDRET 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        IN  N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA
Sbjct: 58  GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVA 117
Query: 139 IEFDTRLDPHFDDPDEN-HIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++S+ T    LQ  + +  NV+ A+    N   +
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQ--NGEEANVVIAFNAATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 46/281 (16%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKT-------EFLAELSIIACLRHKNLV 407
           +G+G FG V+K       SV A+K       EG+T       EF  E+ I++ L H N+V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L G         +V E++P G L   L   +     + W  +L +++ +A  + Y+ Q 
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYM-QN 140
Query: 468 CEQQVIHRDIKASNIMLD------------ANFNARLESSFTLTA--GTMGYLAPEYL-- 511
               ++HRD+++ NI L             A+F    +S  +++   G   ++APE +  
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH-KMVNLVDWVWGLYAEGRIIEAADK 570
           +  + TEK D +S+ +++  +  G  P +  + G  K +N++                ++
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI---------------REE 245
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            L     ED   RL  V   C + D   RP    + + L+ 
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLAELSI-IACLRHKNLVQLLG 411
           LGRGA+G V K     SG + AVKR +   +S E K   L +L I +  +     V   G
Sbjct: 59  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYG 117
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               +G++ +  E M + SLD+   Q  + G  +       I V +  AL +LH +    
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 472 VIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYL-----QYGT 515
           VIHRD+K SN++++A    ++             + T+ AG   Y+APE +     Q G 
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
           +  K+D++S G+ ++E+A  R P
Sbjct: 235 SV-KSDIWSLGITMIELAILRFP 256

>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+E 
Sbjct: 1   TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAV---KNTVGRALYSSPIHIWDRET 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        IN  N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA
Sbjct: 58  GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVA 117
Query: 139 IEFDTRLDPHFDDPDEN-HIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++S+ T    LQ  + +  NV+ A+    N   +
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQ--NGEEANVVIAFNAATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 46/281 (16%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKT-------EFLAELSIIACLRHKNLV 407
           +G+G FG V+K       SV A+K       EG+T       EF  E+ I++ L H N+V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L G         +V E++P G L   L   +     + W  +L +++ +A  + Y+ Q 
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYM-QN 140
Query: 468 CEQQVIHRDIKASNIMLD------------ANFNARLESSFTLTA--GTMGYLAPEYL-- 511
               ++HRD+++ NI L             A+F+   +S  +++   G   ++APE +  
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH-KMVNLVDWVWGLYAEGRIIEAADK 570
           +  + TEK D +S+ +++  +  G  P +  + G  K +N++                ++
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI---------------REE 245
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            L     ED   RL  V   C + D   RP    + + L+ 
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G+FG          G    +K    S+ S + + E   E++++A ++H N+VQ    
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E G L +V +Y   G L + +  +++ GVL      L+  V +  AL ++H   ++++
Sbjct: 92  FEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVH---DRKI 146
Query: 473 IHRDIKASNIML---------DANFNARLESSFTLTAGTMG---YLAPEYLQYGTATEKT 520
           +HRDIK+ NI L         D      L S+  L    +G   YL+PE  +      K+
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKS 206
Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           D+++ G V+ E+      ++   E   M NLV
Sbjct: 207 DIWALGCVLYELCT----LKHAFEAGSMKNLV 234

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 59/295 (20%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-TEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G V AVK+ +HS E    +F  E+ I+  L+H N+V+  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 411 GWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G C   G   L L+ EY+P GSL   L +  E    +     L     +   + YL    
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---G 149
Query: 469 EQQVIHRDIKASNIMLDANFNARLESSFTLTA----------------GTMGYLAPEYLQ 512
            ++ IHRD+   NI+++     ++   F LT                   + + APE L 
Sbjct: 150 TKRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 513 YGTATEKTDVFSYGVVVLEV-----------ACGRRPIERETEGHKMV-NLVDWVWGLYA 560
               +  +DV+S+GVV+ E+           A   R I  + +G  +V +L++    L  
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL---LKN 265
Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR----RVFQILNN 611
            GR+      R +G  +E     + ++   C N + + RPS R    RV QI +N
Sbjct: 266 NGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           +   R+LG+G+FG V       +G   AVK    R       K   L E+ ++  L H N
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           + +L  +  +KG   LV E    G L D ++ +        S      I+  + S +TY 
Sbjct: 88  IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYX 142
Query: 465 HQECEQQVIHRDIKASNIML-----DAN---FNARLESSFTLTA------GTMGYLAPEY 510
           H+    +++HRD+K  N++L     DAN    +  L + F  +       GT  Y+APE 
Sbjct: 143 HK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRP 538
           L +GT  EK DV+S GV++  +  G  P
Sbjct: 200 L-HGTYDEKCDVWSTGVILYILLSGCPP 226

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 46/281 (16%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKT-------EFLAELSIIACLRHKNLV 407
           +G+G FG V+K       SV A+K       EG+T       EF  E+ I++ L H N+V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L G         +V E++P G L   L   +     + W  +L +++ +A  + Y+ Q 
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYM-QN 140
Query: 468 CEQQVIHRDIKASNIMLD------------ANFNARLESSFTLTA--GTMGYLAPEYL-- 511
               ++HRD+++ NI L             A+F    +S  +++   G   ++APE +  
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH-KMVNLVDWVWGLYAEGRIIEAADK 570
           +  + TEK D +S+ +++  +  G  P +  + G  K +N++                ++
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI---------------REE 245
Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            L     ED   RL  V   C + D   RP    + + L+ 
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 24  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------D 438
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L   L +      D
Sbjct: 84  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 439 SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL 498
            E+G  L     L+    +A  + +L     +  IHRD+ A N++L     A++   F L
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI-GDFGL 198
Query: 499 TAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVLEV 532
               M                ++APE +     T ++DV+SYG+++ E+
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 137/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 2   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 54
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 55  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 111
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 112 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 167
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 168 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 227
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 228 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 274
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +  A
Sbjct: 275 PSFRDLALRVDQIRDQMA 292

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 137/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 35  PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 87
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 88  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 144
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHRD+   NI+++     ++   F LT        
Sbjct: 145 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKI-GDFGLTKVLPQDKE 200
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 260
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 261 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 307
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +  A
Sbjct: 308 PSFRDLALRVDQIRDQMA 325

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V+   +  +  VA +K  K        FL E  I+  L+H  LVQL    +E
Sbjct: 17  LGNGQFGEVWMGTWNGNTKVA-IKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EYM  GSL   L +D E G  L   + +++   +A+ + Y+ +      IHR
Sbjct: 76  E-PIYIVTEYMNKGSLLDFL-KDGE-GRALKLPNLVDMAAQVAAGMAYIER---MNYIHR 129
Query: 476 DIKASNIMLD-------ANFN-ARLESSFTLTAGT-----MGYLAPEYLQYGTATEKTDV 522
           D++++NI++        A+F  ARL      TA       + + APE   YG  T K+DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 523 FSYGVVVLE-VACGRRP 538
           +S+G+++ E V  GR P
Sbjct: 190 WSFGILLTELVTKGRVP 206

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 32  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------D 438
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L   L +      D
Sbjct: 92  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 439 SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL 498
            E+G  L     L+    +A  + +L     +  IHRD+ A N++L     A++   F L
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI-GDFGL 206
Query: 499 TAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVLEV 532
               M                ++APE +     T ++DV+SYG+++ E+
Sbjct: 207 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C +
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + ++ EYM NG L   L +             L +   +  A+ YL     +Q +HR
Sbjct: 91  QRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 476 DIKASNIMLD-------ANFNAR---LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N +++       ++F      L+   T + G+   + +  PE L Y   + K+D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 523 FSYGVVVLEV-ACGRRPIERET 543
           +++GV++ E+ + G+ P ER T
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFT 226

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 66/318 (20%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK-T 389
           P +F  R L+   +       LG+G FG+V    Y     ++G V AVK+ +HS E    
Sbjct: 5   PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 57
Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 58  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 114
Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------- 500
              L     +   + YL     ++ IHR++   NI+++     ++   F LT        
Sbjct: 115 IKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKI-GDFGLTKVLPQDKE 170
Query: 501 ---------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-----------ACGRRPIE 540
                      + + APE L     +  +DV+S+GVV+ E+           A   R I 
Sbjct: 171 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 230
Query: 541 RETEGHKMV-NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR 599
            + +G  +V +L++    L   GR+      R +G  +E     + ++   C N + + R
Sbjct: 231 NDKQGQMIVFHLIEL---LKNNGRL-----PRPDGCPDE-----IYMIMTECWNNNVNQR 277
Query: 600 PSMR----RVFQILNNEA 613
           PS R    RV QI +N A
Sbjct: 278 PSFRDLALRVDQIRDNMA 295

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEF-LAELSIIA 399
           R     F   R+LG+G+FG V  A    +G + AVK  K      +   E  + E  I++
Sbjct: 19  RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 400 CLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
             R H  L QL         L  V E++  G L   + +        + ++   I+    
Sbjct: 79  LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEII---- 134
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGY 505
           SAL +LH   ++ +I+RD+K  N++LD   + +L + F +               GT  Y
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKL-ADFGMCKEGICNGVTTATFCGTPDY 190
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           +APE LQ        D ++ GV++ E+ CG  P E E E
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229

>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D + 
Sbjct: 1   TETTSFSITKFGPDQQNLIFQGDGYTTKERLTLTKAV---RNTVGRALYSSPIHIWDSKT 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        I+  N  +  DG  FFI+P +    + GG LG+ NS    K ++ VA
Sbjct: 58  GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVA 117
Query: 139 IEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++SI T    LQ  + K  NV+ A+    N   +
Sbjct: 118 VEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWALQ--NGKEANVVIAFNAATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 92
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 93  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 149
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNAR----------LESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  +          L+  F       G      ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 261 -------EYCPDPLYEVM---LKCWHPKAEMRPS 284

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLAELSI-IACLRHKNLVQLLG 411
           LGRGA+G V K     SG + AVKR +   +S E K   L +L I +  +     V   G
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYG 73
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               +G++ +  E M + SLD+   Q  + G  +       I V +  AL +LH +    
Sbjct: 74  ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 130
Query: 472 VIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYL-----QYGT 515
           VIHRD+K SN++++A    ++           + +  + AG   Y+APE +     Q G 
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
           +  K+D++S G+ ++E+A  R P
Sbjct: 191 SV-KSDIWSLGITMIELAILRFP 212

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 33  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 93  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 146
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 524 SYGVVVLEVACGRRPIERETEGHKMVNLVDWV 555
           S G+ ++E+A GR PI   +    +  L+D++
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238

>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D + 
Sbjct: 1   TETTSFSITKFGPDQQNLIFQGDGYTTKERLTLTKAV---RNTVGRALYSSPIHIWDSKT 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        I+  N  +  DG  FFI+P +    + GG LG+ NS    K ++ VA
Sbjct: 58  GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVA 117
Query: 139 IEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++SI T    LQ  + K  NV+ A+    N   +
Sbjct: 118 VEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWKLQ--NGKEANVVIAFNAATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+E 
Sbjct: 1   TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAV---KNTVGRALYSSPIHIWDRET 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        IN  N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA
Sbjct: 58  GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTETVA 117
Query: 139 IEFDTRLDPHFDDPDEN-HIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++S+ T    LQ  + +  NV+ A+    N   +
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQ--NGEEANVVIAFNAATN---V 172
Query: 198 LKVFMSY 204
           L V ++Y
Sbjct: 173 LTVSLTY 179

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 51  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 109
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 166
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 277
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 278 -------EYCPDPLYEVM---LKCWHPKAEMRPS 301

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 343 LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR 402
           LR A+  F    +LG+GAFG V KA  A      A+K+ +H+ E  +  L+E+ ++A L 
Sbjct: 2   LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 403 H-------------KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           H             +N V+      +K  L +  EY  N +L  +++ ++ N     ++ 
Sbjct: 61  HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------- 492
               ++    AL+Y+H    Q +IHR++K  NI +D + N ++                 
Sbjct: 121 LFRQIL---EALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 493 ---------ESSFTLTAGTMGYLAPEYLQ-YGTATEKTDVFSYGVVVLE 531
                      + T   GT  Y+A E L   G   EK D +S G++  E
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN---LVQLLGW 412
           +GRGA+G+V K     SG + AVKR + + + K +    + +   +R  +   +VQ  G 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 413 CAEKGELLLVYEYMPNGSLDRML-YQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              +G+  +  E M + S D+   Y  S    ++       I +    AL +L +    +
Sbjct: 90  LFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--K 146
Query: 472 VIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQYGTATE-- 518
           +IHRDIK SNI+LD + N +L             + T  AG   Y+APE +    + +  
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 519 --KTDVFSYGVVVLEVACGRRP 538
             ++DV+S G+ + E+A GR P
Sbjct: 207 DVRSDVWSLGITLYELATGRFP 228

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 52  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 110
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 167
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 278
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 279 -------EYCPDPLYEVM---LKCWHPKAEMRPS 302

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 91
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 92  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 148
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 260 -------EYCPDPLYEVM---LKCWHPKAEMRPS 283

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 48/275 (17%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 90
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 91  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 147
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT-----------------MGYL 506
           L     ++ +HRD+ A N MLD  F  ++ + F L                     + ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKV-ADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE 566
           A E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQ 257
Query: 567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                    +  D +  ++   L C +P +  RPS
Sbjct: 258 P-------EYCPDPLYEVM---LKCWHPKAEMRPS 282

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 89
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 90  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 146
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 258 -------EYCPDPLYEVM---LKCWHPKAEMRPS 281

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 25  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 83
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 84  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 140
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 251
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 252 -------EYCPDPLYEVM---LKCWHPKAEMRPS 275

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHKN 405
           F   R+LGRG FG V+     ++G + A K+          G    + E  I+A +  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V L      K +L LV   M  G +   +Y   E+         +     + S L +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 466 QECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLT---AGTMGYLAPEYLQY 513
           Q   + +I+RD+K  N++LD + N R         L++  T T   AGT G++APE L  
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                  D F+ GV + E+   R P      G K+ N
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPF--RARGEKVEN 398

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHKN 405
           F   R+LGRG FG V+     ++G + A K+          G    + E  I+A +  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V L      K +L LV   M  G +   +Y   E+         +     + S L +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 466 QECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLT---AGTMGYLAPEYLQY 513
           Q   + +I+RD+K  N++LD + N R         L++  T T   AGT G++APE L  
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                  D F+ GV + E+   R P      G K+ N
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPF--RARGEKVEN 398

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 88
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 89  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 145
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 257 -------EYCPDPLYEVM---LKCWHPKAEMRPS 280

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHKN 405
           F   R+LGRG FG V+     ++G + A K+          G    + E  I+A +  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V L      K +L LV   M  G +   +Y   E+         +     + S L +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 466 QECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLT---AGTMGYLAPEYLQY 513
           Q   + +I+RD+K  N++LD + N R         L++  T T   AGT G++APE L  
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                  D F+ GV + E+   R P      G K+ N
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPF--RARGEKVEN 398

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 86
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 87  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 143
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 254
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 255 -------EYCPDPLYEVM---LKCWHPKAEMRPS 278

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 91
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 92  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 148
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 260 -------EYCPDPLYEVM---LKCWHPKAEMRPS 283

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 90
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + Y
Sbjct: 91  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKY 147
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT-----MGYLA 507
           L     ++ +HRD+ A N MLD  F  ++           +  +++   T     + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 259 -------EYCPDPLYEVM---LKCWHPKAEMRPS 282

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEFLAELSIIACLRHKN 405
           F   R+LGRG FG V+     ++G + A K+          G    + E  I+A +  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V L      K +L LV   M  G +   +Y   E+         +     + S L +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 466 QECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLT---AGTMGYLAPEYLQY 513
           Q   + +I+RD+K  N++LD + N R         L++  T T   AGT G++APE L  
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN 550
                  D F+ GV + E+   R P      G K+ N
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPF--RARGEKVEN 398

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 139
Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 523 FSYGVVVLEVACGRRP 538
           +S G++ +E+  G  P
Sbjct: 200 WSLGIMAIEMIEGEPP 215

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 91
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 92  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 148
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 260 -------EYCPDPLYEVM---LKCWHPKAEMRPS 283

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA 393
           G R+ SY     A+    S RI G G+FG VYK  +    +V  +K    + E    F  
Sbjct: 23  GQRDSSYYWEIEASEVMLSTRI-GSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRN 81
Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLY-QDSENGVLLSWYHRLN 452
           E++++   RH N++  +G+   K  L +V ++    SL + L+ Q+++       +  ++
Sbjct: 82  EVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLID 136
Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTL 498
           I    A  + YLH    + +IHRD+K++NI L      ++                    
Sbjct: 137 IARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 499 TAGTMGYLAPEYLQYGTATE---KTDVFSYGVVVLEVACGRRP 538
             G++ ++APE ++         ++DV+SYG+V+ E+  G  P
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 140
Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 523 FSYGVVVLEVACGRRP 538
           +S G++ +E+  G  P
Sbjct: 201 WSLGIMAIEMIEGEPP 216

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 139
Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 523 FSYGVVVLEVACGRRP 538
           +S G++ +E+  G  P
Sbjct: 200 WSLGIMAIEMIEGEPP 215

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 38  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 96
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 97  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 153
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 264
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 265 -------EYCPDPLYEVM---LKCWHPKAEMRPS 288

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 335 PREFSYRELRSA---------TRGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHS 384
           P+  S+ + R+A          R +  N I +G G+ G V  A   SSG + AVK+    
Sbjct: 6   PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 65
Query: 385 HEGKTEFL-AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
            + + E L  E+ I+   +H+N+V++        EL +V E++  G+L  ++     N  
Sbjct: 66  KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 125
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--- 500
            ++      + + +  AL+ LH    Q VIHRDIK+ +I+L  +   +L S F   A   
Sbjct: 126 QIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVS 176
Query: 501 ----------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                     GT  ++APE +       + D++S G++V+E+  G  P
Sbjct: 177 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G++G+VYKA    +G + A+K+     + + E + E+SI+      ++V+  G   +
Sbjct: 37  LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
             +L +V EY   GS+  ++   ++    L+      I+      L YLH     + IHR
Sbjct: 96  NTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 476 DIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           DIKA NI+L+   +A+L             +      GT  ++APE +Q        D++
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 524 SYGVVVLEVACGRRP 538
           S G+  +E+A G+ P
Sbjct: 210 SLGITAIEMAEGKPP 224

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 335 PREFSYRELRSA---------TRGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHS 384
           P+  S+ + R+A          R +  N I +G G+ G V  A   SSG + AVK+    
Sbjct: 8   PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 67
Query: 385 HEGKTEFL-AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
            + + E L  E+ I+   +H+N+V++        EL +V E++  G+L  ++     N  
Sbjct: 68  KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 127
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--- 500
            ++      + + +  AL+ LH    Q VIHRDIK+ +I+L  +   +L S F   A   
Sbjct: 128 QIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVS 178
Query: 501 ----------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                     GT  ++APE +       + D++S G++V+E+  G  P
Sbjct: 179 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226

>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  +  N+   GD Y     + LT+ +    ++ G  +Y++P+  +D + 
Sbjct: 1   TETTSFSITKFGPDQPNLIFQGDGYTTKERLTLTKAV---RNTVGRALYSSPIHIWDSKT 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        I+  N  +  DG  FFI+P +    + GG LG+ NS    K ++ VA
Sbjct: 58  GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVA 117
Query: 139 IEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++SI T    LQ  + K  NV+ A+    N   +
Sbjct: 118 VEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWALQ--NGKEANVVIAFNGATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 150
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 207
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 318
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 319 -------EYCPDPLYEVM---LKCWHPKAEMRPS 342

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 89
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 90  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 146
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 258 -------EYCPDPLYEVM---LKCWHPKAEMRPS 281

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 92
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 93  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 149
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 261 -------EYCPDPLYEVM---LKCWHPKAEMRPS 284

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 351 HSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHK 404
           H N ++GRG FG VY      +       +V ++ R     E  ++FL E  I+    H 
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHP 91
Query: 405 NLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           N++ LLG C   +G  L+V  YM +G L   +  ++ N  +      +   + +A  + +
Sbjct: 92  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKF 148
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMG------YLA 507
           L     ++ +HRD+ A N MLD  F  ++          +  F       G      ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+      + R    +  VN  D    L    R+++ 
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
                   +  D +  ++   L C +P +  RPS
Sbjct: 260 -------EYCPDPLYEVM---LKCWHPKAEMRPS 283

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELS 396
           E     LR     F    ++G G +G VYK     +G +AA+K    + + + E   E++
Sbjct: 13  EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN 72
Query: 397 IIACL-RHKNLVQLLGWCAEKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           ++     H+N+    G   +K       +L LV E+   GS+  ++     N +   W  
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI- 131
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--------- 500
              I   +   L++LHQ    +VIHRDIK  N++L  N   +L   F ++A         
Sbjct: 132 -AYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKL-VDFGVSAQLDRTVGRR 186
Query: 501 ----GTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPI 539
               GT  ++APE +        T   K+D++S G+  +E+A G  P+
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 46/221 (20%)
Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           R +G GAFG V++A           ++ AVK  + + S + + +F  E +++A   + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------------LS 446
           V+LLG CA    + L++EYM  G L+  L   S + V                     LS
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
              +L I   +A+ + YL    E++ +HRD+   N ++  N   ++ + F L+       
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI-ADFGLSRNIYSAD 228
Query: 500 --------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
                   A  + ++ PE + Y   T ++DV++YGVV+ E+
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 139
Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           RDIK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 523 FSYGVVVLEVACGRRP 538
           +S G++ +E+  G  P
Sbjct: 200 WSLGIMAIEMIEGEPP 215

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 14  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 127
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203

>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEX 79
           +   +F  T F  +  N+   GD Y     + LT+ +    ++ G  +Y++P+  +D + 
Sbjct: 1   TETTSFSITKFGPDQPNLIFQGDGYTTKERLTLTKAV---RNTVGRALYSSPIHIWDSKT 57
Query: 80  XXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
                        I+  N  +  DG  FFI+P +    + GG LG+ NS    K ++ VA
Sbjct: 58  GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVA 117
Query: 139 IEFDTRLDPHFDDPD-ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  + + HIG+D++S++SI T    LQ  + K  NV+ A+    N   +
Sbjct: 118 VEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWKLQ--NGKEANVVIAFNGATN---V 172
Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 335 PREFSYRELRSA---------TRGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHS 384
           P+  S+ + R+A          R +  N I +G G+ G V  A   SSG + AVK+    
Sbjct: 51  PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 110
Query: 385 HEGKTEFL-AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
            + + E L  E+ I+   +H+N+V++        EL +V E++  G+L  ++     N  
Sbjct: 111 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 170
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--- 500
            ++      + + +  AL+ LH    Q VIHRDIK+ +I+L  +   +L S F   A   
Sbjct: 171 QIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVS 221
Query: 501 ----------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                     GT  ++APE +       + D++S G++V+E+  G  P
Sbjct: 222 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 76  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 189
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 250 SMGLSLVEMAVGRYPI 265

>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 22  SNNMNFDFTSFN--LRNITLLGDSYLRN-GVIGLTR-ELGVPASSS-GSLIYNNPVPFFD 76
           + + +F FT+FN    N+ L  D+ + + G + LT    G P   S G  +Y  P+   D
Sbjct: 1   TESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHD 60
Query: 77  QEXXXXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGL-VNSSQLTKNK 135
                           +     ++  DGLAFF++P +    + GG LGL  + +     +
Sbjct: 61  N--TTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQ 118
Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +    DP+  HIG+D + +ES KT        D+  G      I Y+   
Sbjct: 119 TVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKTTP-----FDMVYGEKANIVITYQAST 171
Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + L   + +  +   +  +   +DL   L   + VGFSA+T    G  E H I SWSF  
Sbjct: 172 KALAASLVFP-VSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAV 230
Query: 253 S 253
           S
Sbjct: 231 S 231

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 335 PREFSYRELRSA---------TRGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHS 384
           P+  S+ + R+A          R +  N I +G G+ G V  A   SSG + AVK+    
Sbjct: 128 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 187
Query: 385 HEGKTEFL-AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
            + + E L  E+ I+   +H+N+V++        EL +V E++  G+L  ++     N  
Sbjct: 188 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 247
Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--- 500
            ++      + + +  AL+ LH    Q VIHRDIK+ +I+L  +   +L S F   A   
Sbjct: 248 QIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVS 298
Query: 501 ----------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                     GT  ++APE +       + D++S G++V+E+  G  P
Sbjct: 299 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 19  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 77  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 137 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL---AEQPYQGLSNEQVL 250
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 251 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 297
Query: 613 AEP 615
            EP
Sbjct: 298 MEP 300

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 14  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 127
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 14  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 127
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 14  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 127
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 14  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 127
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 154
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y++PE LQ    + ++D++
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 215 SMGLSLVEMAVGRYPI 230

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 6   EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 64  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 124 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 237
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 238 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 284
Query: 613 AEP 615
            EP
Sbjct: 285 MEP 287

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 12  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 70  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 130 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 243
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 244 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 290
Query: 613 AEP 615
            EP
Sbjct: 291 MEP 293

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           LG GAFG V++    ++G+  A K     HE   E +  E+  ++ LRH  LV L     
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
           +  E++++YE+M  G L   +  D  N   +S    +  +  +   L ++H   E   +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKV-ADEHNK--MSEDEAVEYMRQVCKGLCHMH---ENNYVH 278
Query: 475 RDIKASNIM-----------LDANFNARLE--SSFTLTAGTMGYLAPEYLQYGTATEKTD 521
            D+K  NIM           +D    A L+   S  +T GT  + APE  +       TD
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
           ++S GV+   +  G  P   E +   + N+    W +
Sbjct: 339 MWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 10  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 67
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 68  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 128 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 241
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 242 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 288
Query: 613 AEP 615
            EP
Sbjct: 289 MEP 291

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           LG GAFG V++    ++G+  A K     HE   E +  E+  ++ LRH  LV L     
Sbjct: 59  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
           +  E++++YE+M  G L   +  D  N   +S    +  +  +   L ++H   E   +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKV-ADEHNK--MSEDEAVEYMRQVCKGLCHMH---ENNYVH 172
Query: 475 RDIKASNIM-----------LDANFNARLE--SSFTLTAGTMGYLAPEYLQYGTATEKTD 521
            D+K  NIM           +D    A L+   S  +T GT  + APE  +       TD
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
           ++S GV+   +  G  P   E +   + N+    W +
Sbjct: 233 MWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 79  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 134
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 81  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 136
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 137 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 223

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 80  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 13  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 71  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 131 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 244
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 245 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 291
Query: 613 AEP 615
            EP
Sbjct: 292 MEP 294

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 78  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 133
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 134 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 220

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 79  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 134
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 81  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 136
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 137 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 223

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 41  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 98
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 99  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 159 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 272
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 273 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 319
Query: 613 AEP 615
            EP
Sbjct: 320 MEP 322

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 78  PHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 133
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 134 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 220

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 79  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 134
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 12  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 70  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 130 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 243
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 244 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 290
Query: 613 AEP 615
            EP
Sbjct: 291 MEP 293

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 42  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 102 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 157
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 158 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 244

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V K     SG + A K    +     + + + EL ++       +V   G  
Sbjct: 24  LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +       +     + ++ GLA    YL ++   Q++
Sbjct: 84  YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA----YLREK--HQIM 137
Query: 474 HRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++    +L          +S      GT  Y+APE LQ    + ++D++
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIW 197
Query: 524 SYGVVVLEVACGRRPI 539
           S G+ ++E+A GR PI
Sbjct: 198 SMGLSLVELAVGRYPI 213

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 51  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 111 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 166
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 167 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 253

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQL 409
           LG GAFG V+ A            + AVK  K + E  + +F  E  ++  L+H+++V+ 
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS-----------WYHRLNIVVGLA 458
            G C E   LL+V+EYM +G L+R L     +  LL+               L +   +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM---G 504
           + + YL        +HRD+   N ++      ++              + +   TM    
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++ PE + Y   T ++DV+S+GVV+ E+   G++P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 80  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQL 409
           LG GAFG V+ A            + AVK  K + E  + +F  E  ++  L+H+++V+ 
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS-----------WYHRLNIVVGLA 458
            G C E   LL+V+EYM +G L+R L     +  LL+               L +   +A
Sbjct: 80  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM---G 504
           + + YL        +HRD+   N ++      ++              + +   TM    
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++ PE + Y   T ++DV+S+GVV+ E+   G++P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 84  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 139
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGW 412
            +LG GAF  V+      +G + A+K  K S   +   L  E++++  ++H+N+V L   
Sbjct: 15  EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 413 CAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
                   LV + +  G L DR+L    E GV       L ++  + SA+ YLH   E  
Sbjct: 75  YESTTHYYLVMQLVSGGELFDRIL----ERGVYTEKDASL-VIQQVLSAVKYLH---ENG 126
Query: 472 VIHRDIKASNIM-LDANFNARLE-SSFTLT-----------AGTMGYLAPEYLQYGTATE 518
           ++HRD+K  N++ L    N+++  + F L+            GT GY+APE L     ++
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEG 545
             D +S GV+   + CG  P   ETE 
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETES 213

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQL 409
           LG GAFG V+ A            + AVK  K + E  + +F  E  ++  L+H+++V+ 
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS-----------WYHRLNIVVGLA 458
            G C E   LL+V+EYM +G L+R L     +  LL+               L +   +A
Sbjct: 86  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM---G 504
           + + YL        +HRD+   N ++      ++              + +   TM    
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           ++ PE + Y   T ++DV+S+GVV+ E+   G++P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 80  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 80  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 222

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 23  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 83  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 138
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 139 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 225

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 79  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 134
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 79  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 134
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 221

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 84  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 139
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 14  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 74  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAEGMNY 129
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 130 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 216

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 27  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 87  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 142
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 143 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 229

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++     + K E +  E+ ++   ++ N+V  L    
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +   +   ++   R  +      AL +LH     QVIH
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHS---NQVIH 140
Query: 475 RDIKASNIML---------DANFNARL---ESSFTLTAGTMGYLAPEYLQYGTATEKTDV 522
           R+IK+ NI+L         D  F A++   +S  +   GT  ++APE +       K D+
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 523 FSYGVVVLEVACGRRP 538
           +S G++ +E+  G  P
Sbjct: 201 WSLGIMAIEMIEGEPP 216

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 71  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 126
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 127 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 213

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LG G FG V    +     VA VK  K     + EF  E   +  L H  LV+  G C++
Sbjct: 16  LGSGQFGVVKLGKWKGQYDVA-VKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           +  + +V EY+ NG L   L     +G  L     L +   +   + +L      Q IHR
Sbjct: 75  EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHR 128
Query: 476 DIKASNIMLDANFNAR----------LESSFTLTAGT---MGYLAPEYLQYGTATEKTDV 522
           D+ A N ++D +   +          L+  +  + GT   + + APE   Y   + K+DV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 523 FSYGVVVLEV-ACGRRPIE---------RETEGHKM 548
           +++G+++ EV + G+ P +         + ++GH++
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRL 224

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 47/239 (19%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--------RSKHSHEGKT------EFLAELSIIA 399
           R LG GA+G V      +  S  A+K        + ++S + K       E   E+S++ 
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
            L H N+++L     +K    LV E+   G     L++   N          NI+  + S
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFDECDAANIMKQILS 157
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE---SSFTLTA------------GTMG 504
            + YLH+     ++HRDIK  NI+L+ N N+ L      F L++            GT  
Sbjct: 158 GICYLHK---HNIVHRDIKPENILLE-NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP---------IERETEGHKMVNLVDW 554
           Y+APE L+     EK DV+S GV++  + CG  P         I++  +G    +  DW
Sbjct: 214 YIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW 271

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 348 RGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKN 405
           R +  N I +G G+ G V  A   SSG + AVK+     + + E L  E+ I+   +H+N
Sbjct: 19  RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V++        EL +V E++  G+L  ++     N   ++      + + +  AL+ LH
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQ 512
               Q VIHRDIK+ +I+L  +   +L S F   A             GT  ++APE + 
Sbjct: 134 A---QGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRP 538
                 + D++S G++V+E+  G  P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 49/242 (20%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 17  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------- 437
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L   L +       
Sbjct: 77  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 438 ------------DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD 485
                       D E+G  L     L+    +A  + +L     +  IHRD+ A N++L 
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 192
Query: 486 ANFNARLESSFTLTAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVL 530
               A++   F L    M                ++APE +     T ++DV+SYG+++ 
Sbjct: 193 NGHVAKI-GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 531 EV 532
           E+
Sbjct: 252 EI 253

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  LRH N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRM-LYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +Q  G    +    LV EY    + D + +++     V ++      +  G    L YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYL 170
Query: 465 HQECEQQVIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQY 513
           H      +IHRD+KA NI+L         +F +A + +      GT  ++APE    +  
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 227
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
           G    K DV+S G+  +E+A  + P+
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPL 253

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 52/304 (17%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 13  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 71  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++   F +T       
Sbjct: 131 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI-GDFGMTRDIXETD 186
Query: 500 ---AGTMG-----YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
               G  G     +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     +
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQV 243
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  
Sbjct: 244 LRFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKE 290
Query: 612 EAEP 615
           E EP
Sbjct: 291 EMEP 294

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 348 RGFHSNRI-LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKN 405
           R +  N I +G G+ G V  A   SSG + AVK+     + + E L  E+ I+   +H+N
Sbjct: 23  RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V++        EL +V E++  G+L  ++     N   ++      + + +  AL+ LH
Sbjct: 83  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQ 512
               Q VIHRDIK+ +I+L  +   +L S F   A             GT  ++APE + 
Sbjct: 138 A---QGVIHRDIKSDSILLTHDGRVKL-SDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRP 538
                 + D++S G++V+E+  G  P
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPP 219

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  LRH N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRM-LYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +Q  G    +    LV EY    + D + +++     V ++      +  G    L YL
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYL 131
Query: 465 HQECEQQVIHRDIKASNIMLD-------ANF-NARLESSFTLTAGTMGYLAPEY---LQY 513
           H      +IHRD+KA NI+L         +F +A + +      GT  ++APE    +  
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 188
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
           G    K DV+S G+  +E+A  + P+
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPL 214

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 20  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 78
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+  SE    +     ++I    A  + YLH +    +IHR
Sbjct: 79  KPQLAIVTQWCEGSSLYHHLHA-SETKFEMK--KLIDIARQTARGMDYLHAKS---IIHR 132
Query: 476 DIKASNIMLD------------ANFNARLESS--FTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L             A   +R   S  F   +G++ ++APE ++   +     
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           ++DV+++G+V+ E+  G+ P        +++ +V         GR   + D     +   
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GRGSLSPDLSKVRSNCP 243
Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL 616
             MKRL+     C       RPS  R+   +   A  L
Sbjct: 244 KRMKRLM---AECLKKKRDERPSFPRILAEIEELAREL 278

>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 119/241 (49%), Gaps = 14/241 (5%)
Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELG--VPASSSGSLIYNNPVPFFD 76
           S++++F F +F  N ++++  G+ S +  GV+ L + +G  +P  + G   Y  P+  ++
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNK-VGNNLPDETGGIARYIAPIHIWN 59
Query: 77  QEXXXXXXXXXXXXXXI-NNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN- 134
                           +  + NP +  DGL FF++P +  L  AGG  GL N ++   + 
Sbjct: 60  CNTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSY 119
Query: 135 KFVAIEFDTRLDP-HFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           + VA+EFDT   P +F DP   HIG+D++ ++SI  A+   +   L   NV    I Y+ 
Sbjct: 120 QTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSIN-AERWNKRYGLN--NVANVEIIYEA 176
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE-GSTELHMIQSWSFQT 252
             + L   ++Y + +    +  + +DL   L   + VGFS ST  G    H + +W F +
Sbjct: 177 SSKTLTASLTYPSDQTSISVTSI-VDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTS 235
Query: 253 S 253
           +
Sbjct: 236 T 236

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLR 402
           S++  F     LG G +  VYK    ++G   A+K  K   E  T   A  E+S++  L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV----GLA 458
           H+N+V+L      + +L LV+E+M N   D   Y DS           LN+V      L 
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDN---DLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYL 506
             L + H   E +++HRD+K  N++++     +L             ++F+    T+ Y 
Sbjct: 119 QGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 507 APEYLQYGTATEKT--DVFSYGVVVLEVACGR 536
           AP+ L  G+ T  T  D++S G ++ E+  G+
Sbjct: 176 APDVLM-GSRTYSTSIDIWSCGCILAEMITGK 206

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 81
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HRD+ A N M+  +F  ++          E+++    G     + +
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 90
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+  SE    +     ++I    A  + YLH +    +IHR
Sbjct: 91  KPQLAIVTQWCEGSSLYHHLHA-SETKFEMK--KLIDIARQTARGMDYLHAKS---IIHR 144
Query: 476 DIKASNIMLD-------ANFNARLESS-------FTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L         +F    E S       F   +G++ ++APE ++   +     
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           ++DV+++G+V+ E+  G+ P        +++ +V         GR   + D     +   
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GRGSLSPDLSKVRSNCP 255
Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL 616
             MKRL+     C       RPS  R+   +   A  L
Sbjct: 256 KRMKRLM---AECLKKKRDERPSFPRILAEIEELAREL 290

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 32  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSL-------DRMLYQ 437
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L        R+L  
Sbjct: 92  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 438 DSENGV---LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES 494
           D    +    LS    L+    +A  + +L     +  IHRD+ A N++L     A++  
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI-G 206
Query: 495 SFTLTAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            F L    M                ++APE +     T ++DV+SYG+++ E+
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 81
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HRD+ A N M+  +F  ++          E+ +    G     + +
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 52/304 (17%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 4   EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 62  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++   F +T       
Sbjct: 122 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI-GDFGMTRDIXETD 177
Query: 500 ---AGTMG-----YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
               G  G     +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     +
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQV 234
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + +V     EG +++  D       N  +M  LL +   C   +   RPS   +   +  
Sbjct: 235 LRFV----MEGGLLDKPD-------NCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKE 281
Query: 612 EAEP 615
           E EP
Sbjct: 282 EMEP 285

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 17  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L +     +      +++I V     LTYL ++   +++
Sbjct: 77  YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV--IKGLTYLREK--HKIM 130
Query: 474 HRDIKASNIMLDANFNARLESSFTLTA-----------GTMGYLAPEYLQYGTATEKTDV 522
           HRD+K SNI++++    +L   F ++            GT  Y++PE LQ    + ++D+
Sbjct: 131 HRDVKPSNILVNSRGEIKL-CDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 523 FSYGVVVLEVACGRRP 538
           +S G+ ++E+A GR P
Sbjct: 190 WSMGLSLVEMAVGRYP 205

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++L  GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 84  PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 139
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 22  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 80
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 81  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HRD+ A N M+  +F  ++          E+ +    G     + +
Sbjct: 141 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEIT 225

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE------FLAEL 395
           +++S  + +     LG G F  VYKA   ++  + A+K+ K  H  + +       L E+
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            ++  L H N++ LL     K  + LV+++M    L+ ++    +N ++L+  H    ++
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVII---KDNSLVLTPSHIKAYML 119
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTM 503
                L YLHQ     ++HRD+K +N++LD N   +L              ++     T 
Sbjct: 120 MTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 504 GYLAPEYL----QYGTATEKTDVFSYGVVVLEV 532
            Y APE L     YG      D+++ G ++ E+
Sbjct: 177 WYRAPELLFGARMYGVG---VDMWAVGCILAEL 206

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 50/290 (17%)
Query: 351 HSNRILGRGAFGNVYKAYF---ASSGSVAAVKR-SKHSHEGKTE-FLAELSIIACLRHKN 405
           HS+R++G+G FG VY   +   A +    A+K  S+ +   + E FL E  ++  L H N
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 406 LVQLLG-WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           ++ L+G     +G   ++  YM +G L + +     N  +      ++  + +A  + YL
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL 140
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMG-----------------YLA 507
               EQ+ +HRD+ A N MLD +F  ++ + F L    +                  + A
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKV-ADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
            E LQ    T K+DV+S+GV++ E+     P  R  +   + + +       A+GR +  
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL-------AQGRRLPQ 249
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV 617
            +      +  D + +++     C   D + RP+    F++L  E E +V
Sbjct: 250 PE------YCPDSLYQVM---QQCWEADPAVRPT----FRVLVGEVEQIV 286

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++L  GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 84  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 139
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 226

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++L  GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 17  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + Y
Sbjct: 77  PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNY 132
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGT--MGYLAPE 509
           L    +++++HRD+ A N+++    + ++            E  +    G   + ++A E
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 510 YLQYGTATEKTDVFSYGVVVLEVAC-GRRP 538
            + +   T ++DV+SYGV V E+   G +P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G++G   K    S G +   K   +   +   K   ++E++++  L+H N+V+    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE- 469
             ++    L +V EY   G L  ++ + ++    L     L ++  L  AL   H+  + 
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 470 -QQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYGTA 516
              V+HRD+K +N+ LD   N +L           ++SF  T  GT  Y++PE +   + 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
            EK+D++S G ++ E+ C   P
Sbjct: 194 NEKSDIWSLGCLLYEL-CALMP 214

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 32  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL 444
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L   L +    G+ 
Sbjct: 92  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 445 LSWYHRLNIVVGLASA-LTYLHQECEQ--------QVIHRDIKASNIMLDANFNARLESS 495
            S+    N    L+S  L +   +  Q          IHRD+ A N++L     A++   
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI-GD 209
Query: 496 FTLTAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           F L    M                ++APE +     T ++DV+SYG+++ E+
Sbjct: 210 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 20  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 78
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 79  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMG----- 504
            + YL+    ++ +HRD+ A N M+  +F  ++   F +T           G  G     
Sbjct: 139 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKI-GDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           ++APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEIT 223

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 81
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMG----- 504
            + YL+    ++ +HRD+ A N M+  +F  ++   F +T           G  G     
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKI-GDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           ++APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 81
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMG----- 504
            + YL+    ++ +HRD+ A N M+  +F  ++   F +T           G  G     
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKI-GDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           ++APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFL 392
           R F   ELR         ++LG G FG V+K  +   G    +    +      G+  F 
Sbjct: 26  RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 78
Query: 393 A---ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENG--VLLS 446
           A    +  I  L H ++V+LLG C     L LV +Y+P GSL D +       G  +LL+
Sbjct: 79  AVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 137
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------- 492
           W       V +A  + YL    E  ++HR++ A N++L +    ++              
Sbjct: 138 WG------VQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 188
Query: 493 ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +  ++     + ++A E + +G  T ++DV+SYGV V E+
Sbjct: 189 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 322 RTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVY---KAYFASSGSVAAV 378
           R  +  + DL   P  F   +    +  +   + LG GA+G V            ++  +
Sbjct: 11  RENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKII 70
Query: 379 KRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-----DR 433
           +++  S    ++ L E++++  L H N+++L  +  +K    LV E    G L      R
Sbjct: 71  RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR 130
Query: 434 MLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE 493
           M + + +  V         I+  + S +TYLH+     ++HRD+K  N++L++     L 
Sbjct: 131 MKFNEVDAAV---------IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALI 178
Query: 494 S--SFTLTA------------GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
               F L+A            GT  Y+APE L+     EK DV+S GV++  +  G  P 
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF 237
Query: 540 ERETE 544
             +T+
Sbjct: 238 GGQTD 242

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 19  EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L     N  +L   S
Sbjct: 77  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 137 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL---AEQPYQGLSNEQVL 250
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 251 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 297
Query: 613 AEP 615
            EP
Sbjct: 298 MEP 300

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFL 392
           R F   ELR         ++LG G FG V+K  +   G    +    +      G+  F 
Sbjct: 8   RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 60
Query: 393 A---ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENG--VLLS 446
           A    +  I  L H ++V+LLG C     L LV +Y+P GSL D +       G  +LL+
Sbjct: 61  AVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------- 492
           W       V +A  + YL    E  ++HR++ A N++L +    ++              
Sbjct: 120 WG------VQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 493 ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +  ++     + ++A E + +G  T ++DV+SYGV V E+
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE 390
           V GPR     ++R     +    +LG GAF  V  A    +  + A+K  +K + EGK  
Sbjct: 5   VEGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 391 FLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWY 448
            +  E++++  ++H N+V L       G L L+ + +  G L DR++    E G   +  
Sbjct: 62  SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKG-FYTER 116
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM---LDANFN--------ARLE---S 494
               ++  +  A+ YLH   +  ++HRD+K  N++   LD +          +++E   S
Sbjct: 117 DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
             +   GT GY+APE L     ++  D +S GV+   + CG  P   E + 
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK---HSHEGKTEFLAELSI----IACLRHKNLVQ 408
           LGRGA+G V K     SG + AVKR +   +S E K   L +L I    + C      V 
Sbjct: 42  LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQK-RLLXDLDISXRTVDC---PFTVT 97
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
             G    +G++ +  E + + SLD+   Q  + G  +       I V +  AL +LH + 
Sbjct: 98  FYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 469 EQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYL-----Q 512
              VIHRD+K SN++++A    +            + +  + AG   Y APE +     Q
Sbjct: 157 --SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRP 538
            G +  K+D++S G+  +E+A  R P
Sbjct: 215 KGYSV-KSDIWSLGITXIELAILRFP 239

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 91/210 (43%), Gaps = 39/210 (18%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G+G+FG V       +  + A+K     +    +E +  F  EL I+  L H  LV 
Sbjct: 21  RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLEHPFLVN 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYLH 465
           L     ++ ++ +V + +  G L   L Q+    E  V L        +  L  AL YL 
Sbjct: 80  LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-------FICELVMALDYLQ 132
Query: 466 QECEQQVIHRDIKASNIMLDA---------NFNARL--ESSFTLTAGTMGYLAPEYLQ-- 512
               Q++IHRD+K  NI+LD          N  A L  E+  T  AGT  Y+APE     
Sbjct: 133 N---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 513 ----YGTATEKTDVFSYGVVVLEVACGRRP 538
               Y  A    D +S GV   E+  GRRP
Sbjct: 190 KGAGYSFA---VDWWSLGVTAYELLRGRRP 216

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y     ++G   AVK  K    G    +   E+ I+  L H+N+V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C E G   + L+ E++P+GSL   L    +N   ++   +L   V +   + YL 
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT----------------MGYLAPE 509
               +Q +HRD+ A N+++++    ++   F LT                   + + APE
Sbjct: 144 S---RQYVHRDLAARNVLVESEHQVKI-GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 510 YLQYGTATEKTDVFSYGVVVLEV 532
            L        +DV+S+GV + E+
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHEL 222

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +LG+G+FG V K     +    AVK   ++   ++  +  L E+ ++  L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              +     +V E    G L D ++ +        S +    I+  + S +TY+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 471 QVIHRDIKASNIMLDAN--------FNARLESSFTLTA------GTMGYLAPEYLQYGTA 516
            ++HRD+K  NI+L++          +  L + F          GT  Y+APE L+ GT 
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
            EK DV+S GV++  +  G  P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 335 PREFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSG--------SVAAVKRSKHSH 385
           P +  Y E     R      + LG GAFG V +A     G        +V  +K + H+ 
Sbjct: 32  PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL 444
           E K   ++EL I++ L +H+N+V LLG C   G +L++ EY   G L   L + S    +
Sbjct: 92  E-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR---V 147
Query: 445 LSWYHRLNIVVGLASALTYLHQECE----------QQVIHRDIKASNIMLDANFNARLES 494
           L       I    AS    LH   +          +  IHRD+ A N++L     A++  
Sbjct: 148 LETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI-G 206
Query: 495 SFTLTAGTMG---------------YLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            F L    M                ++APE +     T ++DV+SYG+++ E+
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 6   EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L  + EN  +L   S
Sbjct: 64  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N  +  +F  ++          E+ +
Sbjct: 124 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 237
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D       N  +M  LL +   C   +   RPS   +   +  E
Sbjct: 238 RFV----MEGGLLDKPD-------NCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKEE 284
Query: 613 AEP 615
            EP
Sbjct: 285 MEP 287

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG   FG VYK +             A+K  K   EG  + EF  E  + A L+H N+V 
Sbjct: 34  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRLNIVVG 456
           LLG   +   L +++ Y  +G L   L   S +  +            L     +++V  
Sbjct: 94  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----------SFTLTAGTM-- 503
           +A+ + YL       V+H+D+   N+++    N ++              + L   ++  
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 504 -GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
             ++APE + YG  +  +D++SYGVV+ EV
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE 390
           V GPR     ++R     +    +LG GAF  V  A    +  + A+K  +K + EGK  
Sbjct: 5   VEGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 391 FLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWY 448
            +  E++++  ++H N+V L       G L L+ + +  G L DR++    E G   +  
Sbjct: 62  SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKG-FYTER 116
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM---LDANFN--------ARLE---S 494
               ++  +  A+ YLH   +  ++HRD+K  N++   LD +          +++E   S
Sbjct: 117 DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
             +   GT GY+APE L     ++  D +S GV+   + CG  P   E + 
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG   FG VYK +             A+K  K   EG  + EF  E  + A L+H N+V 
Sbjct: 17  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRLNIVVG 456
           LLG   +   L +++ Y  +G L   L   S +  +            L     +++V  
Sbjct: 77  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-----------SFTLTAGTM-- 503
           +A+ + YL       V+H+D+   N+++    N ++              + L   ++  
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 504 -GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
             ++APE + YG  +  +D++SYGVV+ EV
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 50/303 (16%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSV-------AAVK--RSKHSHEGKTEFL 392
           E   A      +R LG+G+FG VY+    + G V        A+K      S   + EFL
Sbjct: 9   EWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 66
Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLL---S 446
            E S++      ++V+LLG  ++    L++ E M  G L    R L     N  +L   S
Sbjct: 67  NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSF 496
               + +   +A  + YL+     + +HRD+ A N M+  +F  ++          E+ +
Sbjct: 127 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 497 TLTAGT----MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
               G     + +++PE L+ G  T  +DV+S+GVV+ E+A      E+  +G     ++
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVL 240
Query: 553 DWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
            +V     EG +++  D   +  F   E+ R+      C   +   RPS   +   +  E
Sbjct: 241 RFV----MEGGLLDKPDNCPDMLF---ELMRM------CWQYNPKMRPSFLEIISSIKEE 287
Query: 613 AEP 615
            EP
Sbjct: 288 MEP 290

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA----ELSIIACLRHKN 405
           F    +LG+G+F  VY+A    +G   A+K        K   +     E+ I   L+H +
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD----SENGVLLSWYHRLNIVVGLASAL 461
           +++L  +  +   + LV E   NG ++R L       SEN       H ++ ++   + +
Sbjct: 73  ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN----EARHFMHQII---TGM 125
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAP 508
            YLH      ++HRD+  SN++L  N N ++             E  +TL  GT  Y++P
Sbjct: 126 LYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-CGTPNYISP 181
Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           E         ++DV+S G +   +  GR P + +T
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE 390
           V GPR     ++R     +    +LG GAF  V  A    +  + A+K  +K + EGK  
Sbjct: 5   VEGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 391 FLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWY 448
            +  E++++  ++H N+V L       G L L+ + +  G L DR++    E G   +  
Sbjct: 62  SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKG-FYTER 116
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM---LDANFN--------ARLE---S 494
               ++  +  A+ YLH   +  ++HRD+K  N++   LD +          +++E   S
Sbjct: 117 DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
             +   GT GY+APE L     ++  D +S GV+   + CG  P   E + 
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE 390
           V GPR     ++R     +    +LG GAF  V  A    +  + A+K  +K + EGK  
Sbjct: 5   VEGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 391 FLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWY 448
            +  E++++  ++H N+V L       G L L+ + +  G L DR++    E G   +  
Sbjct: 62  SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKG-FYTER 116
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM---LDANFN--------ARLE---S 494
               ++  +  A+ YLH   +  ++HRD+K  N++   LD +          +++E   S
Sbjct: 117 DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
             +   GT GY+APE L     ++  D +S GV+   + CG  P   E + 
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVKRSKHSHEGK--TEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y     ++G   AVK  K    G    +   E+ I+  L H+N+V
Sbjct: 15  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C E G   + L+ E++P+GSL   L    +N   ++   +L   V +   + YL 
Sbjct: 75  KYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT----------------MGYLAPE 509
               +Q +HRD+ A N+++++    ++   F LT                   + + APE
Sbjct: 132 S---RQYVHRDLAARNVLVESEHQVKI-GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 510 YLQYGTATEKTDVFSYGVVVLEV 532
            L        +DV+S+GV + E+
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHEL 210

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A    +G   AVK+     + + E L  E+ I+    H N+V +     
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V E++  G+L  ++     N   ++      + + +  AL+YLH    Q VIH
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN---QGVIH 164
Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEY---LQYGTATE 518
           RDIK+ +I+L ++   +L S F   A             GT  ++APE    L YGT   
Sbjct: 165 RDIKSDSILLTSDGRIKL-SDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT--- 220
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           + D++S G++V+E+  G  P   E     M  + D
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 255

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+ L H+N+
Sbjct: 37  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 97  VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEI 239

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+ L H+N+
Sbjct: 51  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEI 253

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIA 399
           R     F   ++LG+G FG V      ++G   A+K  K     + +     L E  ++ 
Sbjct: 6   RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
             RH  L  L         L  V EY   G L   L ++       + ++   IV    S
Sbjct: 66  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 121
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLA 507
           AL YLH   E+ V++RD+K  N+MLD + + ++             ++     GT  YLA
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           PE L+        D +  GVV+ E+ CGR P 
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  +   + E  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N   R+ + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRI-ADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 31/201 (15%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLLG 411
           ++G G++G V K     +G + A+K+   S + K      + E+ ++  LRH+NLV LL 
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 412 WCAEKGELLLVYEYMPNGSLDRM-LYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
            C +K    LV+E++ +  LD + L+ +  +  ++  Y     +  + + + + H     
Sbjct: 92  VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY-----LFQIINGIGFCHS---H 143
Query: 471 QVIHRDIKASNIMLDANFNARLES---SFTLTA---------GTMGYLAPEYL----QYG 514
            +IHRDIK  NI++  +   +L     + TL A          T  Y APE L    +YG
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 515 TATEKTDVFSYGVVVLEVACG 535
            A    DV++ G +V E+  G
Sbjct: 204 KA---VDVWAIGCLVTEMFMG 221

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 36  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 95  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 148
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 209 QSDVYAFGIVLYELMTGQLP 228

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH    + +IHR
Sbjct: 75  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSIIHR 128
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 18  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 77  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 130
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 191 QSDVYAFGIVLYELMTGQLP 210

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-AELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A    SG   AVK      + + E L  E+ I+   +H N+V++     
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL ++ E++  G+L  ++ Q     V L+      +   +  AL YLH    Q VIH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLH---AQGVIH 164
Query: 475 RDIKASNIMLDANFNARLESSFTLTA-------------GTMGYLAPEYLQYGTATEKTD 521
           RDIK+ +I+L  +   +L S F   A             GT  ++APE +       + D
Sbjct: 165 RDIKSDSILLTLDGRVKL-SDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           ++S G++V+E+  G  P   ++    M  L D
Sbjct: 224 IWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIA 399
           R     F   ++LG+G FG V      ++G   A+K  K     + +     L E  ++ 
Sbjct: 4   RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
             RH  L  L         L  V EY   G L   L ++       + ++   IV    S
Sbjct: 64  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 119
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLA 507
           AL YLH E  + V++RD+K  N+MLD + + ++             ++     GT  YLA
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           PE L+        D +  GVV+ E+ CGR P 
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 133
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 75  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 128
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G    VY A         A+K      +   E    F  E+   + L H+N+V ++ 
Sbjct: 19  LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              E     LV EY+   +L   +    E+   LS    +N    +   + + H   + +
Sbjct: 79  VDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAH---DMR 131
Query: 472 VIHRDIKASNIMLDANFNARL----------ESSFTLT---AGTMGYLAPEYLQYGTATE 518
           ++HRDIK  NI++D+N   ++          E+S T T    GT+ Y +PE  +     E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 519 KTDVFSYGVVVLEVACGRRPIERET 543
            TD++S G+V+ E+  G  P   ET
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGET 216

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH    + +IHR
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 133
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 43  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 155
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 216 QSDVYAFGIVLYELMTGQLP 235

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 81
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HR++ A N M+  +F  ++          E+ +    G     + +
Sbjct: 142 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AVK   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L     +G +     R      + SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G+  Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AVK   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L     +G +     R      + SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G+  Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ + 
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
           K +L +V ++    SL   L+       ++     ++I    A  + YLH +    +IHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIA 399
           R     F   ++LG+G FG V      ++G   A+K  K     + +     L E  ++ 
Sbjct: 5   RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
             RH  L  L         L  V EY   G L   L ++       + ++   IV    S
Sbjct: 65  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 120
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLA 507
           AL YLH   E+ V++RD+K  N+MLD + + ++             ++     GT  YLA
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           PE L+        D +  GVV+ E+ CGR P 
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 354 RILGRGAFGNVY--------KAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R LG+G+FG VY        K    +  +V  V  S    E + EFL E S++      +
Sbjct: 24  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RIEFLNEASVMKGFTCHH 82
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGV---LLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L+V E M +G L    R L  ++EN       +    + +   +A 
Sbjct: 83  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGT----MGY 505
            + YL+    ++ +HR++ A N M+  +F  ++          E+ +    G     + +
Sbjct: 143 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVA 533
           +APE L+ G  T  +D++S+GVV+ E+ 
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEIT 227

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 36/268 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
             +L +V ++    SL   L+  SE    +     ++I    A  + YLH +    +IHR
Sbjct: 92  P-QLAIVTQWCEGSSLYHHLHA-SETKFEMK--KLIDIARQTARGMDYLHAKS---IIHR 144
Query: 476 DIKASNIMLD-------ANFNARLESS-------FTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L         +F    E S       F   +G++ ++APE ++   +     
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           ++DV+++G+V+ E+  G+ P        +++ +V         GR   + D     +   
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GRGSLSPDLSKVRSNCP 255
Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVF 606
             MKRL+     C       RPS  R+ 
Sbjct: 256 KRMKRLM---AECLKKKRDERPSFPRIL 280

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L++ H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R+LR     +   +++GRGAFG V      S+  V A+K  SK     +++   F  E  
Sbjct: 62  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W       V 
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVV 178
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TAGTM 503
           L  AL  +H       IHRD+K  N++LD + + +L    T                GT 
Sbjct: 179 L--ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 504 GYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPI 539
            Y++PE L+     G    + D +S GV + E+  G  P 
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R+LR     +   +++GRGAFG V      S+  V A+K  SK     +++   F  E  
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W       V 
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVV 183
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TAGTM 503
           L  AL  +H       IHRD+K  N++LD + + +L    T                GT 
Sbjct: 184 L--ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 504 GYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPI 539
            Y++PE L+     G    + D +S GV + E+  G  P 
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +LG+G+FG V K     +    AVK   ++   ++  +  L E+ ++  L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              +     +V E    G L D ++ +        S +    I+  + S +TY+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 471 QVIHRDIKASNIMLDAN--------FNARLESSFTLTA------GTMGYLAPEYLQYGTA 516
            ++HRD+K  NI+L++          +  L + F          GT  Y+APE L+ GT 
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
            EK DV+S GV++  +  G  P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G++G   K    S G +   K   +   +   K   ++E++++  L+H N+V+    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE- 469
             ++    L +V EY   G L  ++ + ++    L     L ++  L  AL   H+  + 
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 470 -QQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYGTA 516
              V+HRD+K +N+ LD   N +L           ++SF     GT  Y++PE +   + 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
            EK+D++S G ++ E+ C   P
Sbjct: 194 NEKSDIWSLGCLLYEL-CALMP 214

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           +LG+G+FG V K     +    AVK   ++   ++  +  L E+ ++  L H N+++L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              +     +V E    G L D ++ +        S +    I+  + S +TY+H+    
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKR-----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 471 QVIHRDIKASNIMLDAN--------FNARLESSFTLTA------GTMGYLAPEYLQYGTA 516
            ++HRD+K  NI+L++          +  L + F          GT  Y+APE L+ GT 
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 517 TEKTDVFSYGVVVLEVACGRRP 538
            EK DV+S GV++  +  G  P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AVK   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 13  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG---LASALTYLHQE 467
                +  L LV EY   G +   L       V   W            + SA+ Y HQ+
Sbjct: 73  EVIETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 468 CEQQVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTA 516
               ++HRD+KA N++LDA+ N ++      + FT         G+  Y APE  Q G  
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ-GKK 181
Query: 517 TE--KTDVFSYGVVVLEVACGRRPIE 540
            +  + DV+S GV++  +  G  P +
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKR--SKHSHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK     +S + + +FL E  II+   H+N+
Sbjct: 51  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEI 253

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKN---LVQLL 410
           +G G  G V+K  F  +G V AVK+ + S   E     L +L ++  L+  +   +VQ  
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCF 90
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G      ++ +  E M  G+    L +  +  +      ++   V +  AL YL ++   
Sbjct: 91  GTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMT--VAIVKALYYLKEK--H 144
Query: 471 QVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQYGTATE- 518
            VIHRD+K SNI+LD     +L           + +   +AG   Y+APE +     T+ 
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP 204
Query: 519 ----KTDVFSYGVVVLEVACGRRP 538
               + DV+S G+ ++E+A G+ P
Sbjct: 205 DYDIRADVWSLGISLVELATGQFP 228

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R+LR     +   +++GRGAFG V      S+  V A+K  SK     +++   F  E  
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W       V 
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVV 183
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TAGTM 503
           L  AL  +H       IHRD+K  N++LD + + +L    T                GT 
Sbjct: 184 L--ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 504 GYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRPI 539
            Y++PE L+     G    + D +S GV + E+  G  P 
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 31/213 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAV----KRSKHSHEGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+    K+     +G+T  L E   LS+++   
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS---WYHRLNIVVGLAS 459
              +V +        +L  + + M  G L    Y  S++GV       ++   I++G   
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPE 509
            L ++H      V++RD+K +NI+LD + + R     L   F+      + GT GY+APE
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 510 YLQYGTATEKT-DVFSYGVVVLEVACGRRPIER 541
            LQ G A + + D FS G ++ ++  G  P  +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 31/213 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAV----KRSKHSHEGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+    K+     +G+T  L E   LS+++   
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS---WYHRLNIVVGLAS 459
              +V +        +L  + + M  G L    Y  S++GV       ++   I++G   
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPE 509
            L ++H      V++RD+K +NI+LD + + R     L   F+      + GT GY+APE
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 510 YLQYGTATEKT-DVFSYGVVVLEVACGRRPIER 541
            LQ G A + + D FS G ++ ++  G  P  +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 69  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 125
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 126 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 183 KYYSTA---VDIWSLGCIFAEMVTRR 205

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 31/213 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAV----KRSKHSHEGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+    K+     +G+T  L E   LS+++   
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS---WYHRLNIVVGLAS 459
              +V +        +L  + + M  G L    Y  S++GV       ++   I++G   
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPE 509
            L ++H      V++RD+K +NI+LD + + R     L   F+      + GT GY+APE
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 510 YLQYGTATEKT-DVFSYGVVVLEVACGRRPIER 541
            LQ G A + + D FS G ++ ++  G  P  +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 31/213 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAV----KRSKHSHEGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+    K+     +G+T  L E   LS+++   
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS---WYHRLNIVVGLAS 459
              +V +        +L  + + M  G L    Y  S++GV       ++   I++G   
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRFYAAEIILG--- 303
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNAR-----LESSFT-----LTAGTMGYLAPE 509
            L ++H      V++RD+K +NI+LD + + R     L   F+      + GT GY+APE
Sbjct: 304 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 359
Query: 510 YLQYGTATEKT-DVFSYGVVVLEVACGRRPIER 541
            LQ G A + + D FS G ++ ++  G  P  +
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 72  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 128
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 129 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 186 KYYSTA---VDIWSLGCIFAEMVTRR 208

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 28  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 88  VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 148 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEI 230

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIA 399
           R     F   ++LG+G FG V      ++G   A+K  K     + +     L E  ++ 
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
             RH  L  L         L  V EY   G L   L ++       + ++   IV    S
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 259
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLA 507
           AL YLH   E+ V++RD+K  N+MLD + + ++             ++     GT  YLA
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           PE L+        D +  GVV+ E+ CGR P 
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 72  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 128
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 129 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 186 KYYSTA---VDIWSLGCIFAEMVTRR 208

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AVK   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L     +G +     R      + SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G   Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNL 406
           +   + +G+G F  V  A    +G   AVK   +++ +     +   E+ I+  L H N+
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+L      +  L LV EY   G +   L     +G +     R      + SA+ Y HQ
Sbjct: 77  VKLFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQ 132
Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGT 515
              + ++HRD+KA N++LD + N ++      + FT+        G+  Y APE  Q G 
Sbjct: 133 ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQ-GK 188
Query: 516 ATE--KTDVFSYGVVVLEVACGRRPIE 540
             +  + DV+S GV++  +  G  P +
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIA 399
           R     F   ++LG+G FG V      ++G   A+K  K     + +     L E  ++ 
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
             RH  L  L         L  V EY   G L   L ++       + ++   IV    S
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 262
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLA 507
           AL YLH   E+ V++RD+K  N+MLD + + ++             ++     GT  YLA
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           PE L+        D +  GVV+ E+ CGR P 
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 37  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 97  VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEI 239

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKNTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEI 238

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 51  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEI 253

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 96  VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEI 238

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 37  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 97  VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEI 239

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 123 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 180 KYYSTA---VDIWSLGCIFAEMVTRR 202

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   A+K   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 18  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L L+ EY   G +   L     +G +     R      + SA+ Y HQ   +
Sbjct: 78  EVIETEKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFR-QIVSAVQYCHQ---K 130
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLTA------GTMGYLAPEYLQYGTATE- 518
           +++HRD+KA N++LDA+ N ++      + FT+        G+  Y APE  Q G   + 
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQ-GKKYDG 189
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD 212

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRS--KHSHEGKTEFLAELSIIACLRHKNLV 407
           +    ++G GA   V  AY A      A+KR   +       E L E+  ++   H N+V
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 408 QLLGWCAEKGELLLVYEYMPNGS----LDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
                   K EL LV + +  GS    +  ++ +      +L       I+  +   L Y
Sbjct: 77  SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLE----SSFTLTAG-------------TMGYL 506
           LH+  +   IHRD+KA NI+L  + + ++     S+F  T G             T  ++
Sbjct: 137 LHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 507 APEYLQYGTATE-KTDVFSYGVVVLEVACGRRPIER 541
           APE ++     + K D++S+G+  +E+A G  P  +
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AV+   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L     +G +     R      + SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G+  Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRS--KHSHEGKTEFLAELSIIACLRHKNLV 407
           +    ++G GA   V  AY A      A+KR   +       E L E+  ++   H N+V
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 408 QLLGWCAEKGELLLVYEYMPNGS----LDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
                   K EL LV + +  GS    +  ++ +      +L       I+  +   L Y
Sbjct: 72  SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLE----SSFTLTAG-------------TMGYL 506
           LH+  +   IHRD+KA NI+L  + + ++     S+F  T G             T  ++
Sbjct: 132 LHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 507 APEYLQYGTATE-KTDVFSYGVVVLEVACGRRPIER 541
           APE ++     + K D++S+G+  +E+A G  P  +
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AV+   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L     +G +     R      + SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G+  Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 43  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 163 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEI 245

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 35/213 (16%)
Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKN 405
           R+LG+G +G V+   K   A++G + A+K  K +      +      AE +I+  ++H  
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS----WYHRLNIVVGLASAL 461
           +V L+      G+L L+ EY+  G L     Q    G+ +     +Y     +  ++ AL
Sbjct: 83  IVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFY-----LAEISMAL 134
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPE 509
            +LHQ   + +I+RD+K  NIML+   + +L           + + T T  GT+ Y+APE
Sbjct: 135 GHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRPIERE 542
            L         D +S G ++ ++  G  P   E
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 53  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 173 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEI 255

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 47/210 (22%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y      +G + AVK  ++    + ++ +  E+ I+  L H++++
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C ++GE  L LV EY+P GSL   L + S               +GLA  L +  
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---------------IGLAQLLLFAQ 124
Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------- 502
           Q CE       Q  IHR++ A N++LD +   ++   F L                    
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKI-GDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + + APE L+       +DV+S+GV + E+
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 47/210 (22%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y      +G + AVK  ++    + ++ +  E+ I+  L H++++
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C ++GE  L LV EY+P GSL   L + S               +GLA  L +  
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---------------IGLAQLLLFAQ 124
Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------- 502
           Q CE       Q  IHR++ A N++LD +   ++   F L                    
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKI-GDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + + APE L+       +DV+S+GV + E+
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           +   + LG GA+G V       +G+  A+K  K S    T      L E++++  L H N
Sbjct: 23  YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +K    LV E    G L D ++ +        S      I+  + S  TYL
Sbjct: 83  IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 137
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES--SFTLTA------------GTMGYLAPEY 510
           H+     ++HRD+K  N++L++     L     F L+A            GT  Y+APE 
Sbjct: 138 HK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 194
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           L+     EK DV+S GV++  + CG  P   +T+
Sbjct: 195 LR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTD 227

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSK-HSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG V       +G   AVK   R K  S +   +   E+  +   RH ++++L  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             +   ++ +V EY+  G L   +    +NG L     R  +   + S + Y H+     
Sbjct: 84  VISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESR-RLFQQILSGVDYCHR---HM 136
Query: 472 VIHRDIKASNIMLDANFNARLESSFTL------------TAGTMGYLAPEYLQYGT-ATE 518
           V+HRD+K  N++LDA+ NA++ + F L            + G+  Y APE +     A  
Sbjct: 137 VVHRDLKPENVLLDAHMNAKI-ADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 519 KTDVFSYGVVVLEVACGRRPIE 540
           + D++S GV++  + CG  P +
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKN 405
           R+LG+G +G V+   K   A++G + A+K  K +      +      AE +I+  ++H  
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLS----WYHRLNIVVGLASAL 461
           +V L+      G+L L+ EY+  G L     Q    G+ +     +Y     +  ++ AL
Sbjct: 83  IVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFY-----LAEISMAL 134
Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAP 508
            +LHQ   + +I+RD+K  NIML+   + +L + F L               GT+ Y+AP
Sbjct: 135 GHLHQ---KGIIYRDLKPENIMLNHQGHVKL-TDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE 542
           E L         D +S G ++ ++  G  P   E
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 72  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 127
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 128 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGS------VAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G          V R   S +   E L E  ++A +    + 
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C     + LV + MP G L   L    EN   L     LN  + +A  ++YL   
Sbjct: 83  RLLGICL-TSTVQLVTQLMPYGCL---LDHVRENRGRLGSQDLLNWCMQIAKGMSYLE-- 136
Query: 468 CEQQVIHRDIKASNIMLDA-------NFN-ARL----ESSFTLTAGT--MGYLAPEYLQY 513
            + +++HRD+ A N+++ +       +F  ARL    E+ +    G   + ++A E +  
Sbjct: 137 -DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 514 GTATEKTDVFSYGVVVLEVAC-GRRP 538
              T ++DV+SYGV V E+   G +P
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKP 221

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           +   + LG GA+G V       +G+  A+K  K S    T      L E++++  L H N
Sbjct: 6   YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++L  +  +K    LV E    G L D ++ +        S      I+  + S  TYL
Sbjct: 66  IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 120
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES--SFTLTA------------GTMGYLAPEY 510
           H+     ++HRD+K  N++L++     L     F L+A            GT  Y+APE 
Sbjct: 121 HK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 177
Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           L+     EK DV+S GV++  + CG  P   +T+
Sbjct: 178 LR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTD 210

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 63  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              +S+    G     + ++
Sbjct: 183 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEI 265

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   A+K   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 21  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L L+ EY   G +   L     +G +     R      + SA+ Y HQ   +
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFR-QIVSAVQYCHQ---K 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLTA------GTMGYLAPEYLQYGTATE- 518
           +++HRD+KA N++LDA+ N ++      + FT+        G   Y APE  Q G   + 
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ-GKKYDG 192
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELS 396
           +++     F  +++LG+G+FG V+ A F  +    A+K  K        + +   + +  
Sbjct: 12  QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           +     H  L  +      K  L  V EY+  G L   +    +  +  + ++   I++G
Sbjct: 72  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMG 504
           L     +LH    + +++RD+K  NI+LD + + ++            ++      GT  
Sbjct: 132 L----QFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           Y+APE L         D +S+GV++ E+  G+ P   + E
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 224

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G G++G   K    S G +   K   +   +   K   ++E++++  L+H N+V+    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 413 CAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE- 469
             ++    L +V EY   G L  ++ + ++    L     L ++  L  AL   H+  + 
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 470 -QQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGT 515
              V+HRD+K +N+ LD   N +L   F L               GT  Y++PE +   +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKL-GDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
             EK+D++S G ++ E+ C   P
Sbjct: 193 YNEKSDIWSLGCLLYEL-CALMP 214

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
             +L +V ++    SL   L+       ++     ++I    A  + YLH    + +IHR
Sbjct: 76  P-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSIIHR 128
Query: 476 DIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGTATE--- 518
           D+K++NI L  +   ++                 F   +G++ ++APE ++         
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 519 KTDVFSYGVVVLEVACGRRP 538
           ++DV+++G+V+ E+  G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 264
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           R L+     +   +++GRGAFG V      +S  V A+K  SK     +++   F  E  
Sbjct: 68  RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           I+A      +VQL     +   L +V EYMP G L  ++   S   V   W       V 
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVV 184
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TAGTM 503
           L  AL  +H      +IHRD+K  N++LD + + +L    T                GT 
Sbjct: 185 L--ALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTP 239
Query: 504 GYLAPEYLQY----GTATEKTDVFSYGVVVLEVACGRRP 538
            Y++PE L+     G    + D +S GV + E+  G  P
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELS 396
           +++     F  +++LG+G+FG V+ A F  +    A+K  K        + +   + +  
Sbjct: 11  QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           +     H  L  +      K  L  V EY+  G L   +    +  +  + ++   I++G
Sbjct: 71  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMG 504
           L     +LH    + +++RD+K  NI+LD + + ++            ++      GT  
Sbjct: 131 L----QFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           Y+APE L         D +S+GV++ E+  G+ P   + E
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 10  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 70  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALEYLH 125
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE------------SSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 126 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
                  D +  GVV+ E+ CGR P 
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPF 208

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 47/210 (22%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y      +G + AVK  ++    + ++ +  E+ I+  L H++++
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C + G   L LV EY+P GSL   L + S               +GLA  L +  
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---------------IGLAQLLLFAQ 141
Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------- 502
           Q CE       Q  IHRD+ A N++LD +   ++   F L                    
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKI-GDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + + APE L+       +DV+S+GV + E+
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYEL 230

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 92  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 207
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
            R LG GAFG+V+     SSG    +K      S     +  AE+ ++  L H N++++ 
Sbjct: 27  KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               +   + +V E    G L   +      G  LS  +   ++  + +AL Y H    Q
Sbjct: 87  EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---Q 143
Query: 471 QVIHRDIKASNIMLD---------------ANFNARLESSFTLTAGTMGYLAPEYLQYGT 515
            V+H+D+K  NI+                 A      E S T  AGT  Y+APE  +   
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEVFKRDV 202
Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
            T K D++S GVV+  +  G  P
Sbjct: 203 -TFKCDIWSAGVVMYFLLTGCLP 224

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 95  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 210
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTE--FLAELSII-ACLRHK 404
           FH  +++G+G+FG V  A   +     AVK  + K   + K E   ++E +++   ++H 
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            LV L        +L  V +Y+  G L    Y        L    R      +ASAL YL
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAAEIASALGYL 155
Query: 465 HQECEQQVIHRDIKASNIMLDAN------------FNARLESSFTLTAGTMGYLAPEYLQ 512
           H      +++RD+K  NI+LD+              N    S+ +   GT  YLAPE L 
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
                   D +  G V+ E+  G  P           N+++    L  +  I  +A   L
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSARHLL 270
Query: 573 NGAFNEDEMKRL 584
            G   +D  KRL
Sbjct: 271 EGLLQKDRTKRL 282

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG G FG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             +++   ++ 
Sbjct: 90  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 205
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   AVK   +++ +     +   E+ I   L H N+V+L 
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                +  L LV EY   G +   L          +      IV    SA+ Y HQ+   
Sbjct: 80  EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCHQKF-- 133
Query: 471 QVIHRDIKASNIMLDANFNARL-----ESSFTLT------AGTMGYLAPEYLQYGTATE- 518
            ++HRD+KA N++LDA+ N ++      + FT         G   Y APE  Q G   + 
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ-GKKYDG 191
Query: 519 -KTDVFSYGVVVLEVACGRRPIE 540
            + DV+S GV++  +  G  P +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 62/229 (27%)
Query: 354 RILGRGAFGNVYKA--YFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           ++LG GAFG V  A  Y  S   V+   AVK  + K     +   ++EL ++  L  H+N
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-------------DRMLY------QDSENGVLLS 446
           +V LLG C   G + L++EY   G L             D + Y      ++ E+  +L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN-------------------IMLDAN 487
           +   L     +A  + +L     +  +HRD+ A N                   IM D+N
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 488 F----NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           +    NARL          + ++APE L  G  T K+DV+SYG+++ E+
Sbjct: 228 YVVRGNARL---------PVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 54  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              + +    G     + ++
Sbjct: 174 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEI 256

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 124 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 181 KYYSTA---VDIWSLGCIFAEMVTRR 203

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 125 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 182 KYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 124 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 181 KYYSTA---VDIWSLGCIFAEMVTRR 203

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 123
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 124 ---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 181 KYYSTA---VDIWSLGCIFAEMVTRR 203

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYL 464
           V+LL     + +L LV+E++   S+D   + D+    G+ L      + +  L   L + 
Sbjct: 68  VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL- 511
           H     +V+HRD+K  N++++     +L              ++     T+ Y APE L 
Sbjct: 123 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 512 ---QYGTATEKTDVFSYGVVVLEVACGR 536
               Y TA    D++S G +  E+   R
Sbjct: 180 GCKYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl) In Complex With Man1-2man-Ome Length = 237

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DPD  HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VGKRLSAVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 125 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 182 KYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
              +A + +D+++ G ++ ++  G  P     EG
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG 240

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 123 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 180 KYYSTA---VDIWSLGCIFAEMVTRR 202

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK--------RSKHSHEGKTEFLAEL 395
           + + + F   R LG G+FG V+      +G   A+K        R K       E L  L
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-L 60
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           SI+    H  ++++ G   +  ++ ++ +Y+  G L  +L +       ++ ++   + +
Sbjct: 61  SIVT---HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGY 505
               AL YLH    + +I+RD+K  NI+LD N + ++          + ++ L  GT  Y
Sbjct: 118 ----ALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-CGTPDY 169
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           +APE +      +  D +S+G+++ E+  G  P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
              +A + +D+++ G ++ ++  G  P     EG
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEG 240

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 30/206 (14%)
Query: 354 RILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +      S    AVK      S + + +FL E  II+   H+N+
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L   L +          L+    L++   +A    Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT----MGYL 506
           L    E   IHRDI A N +L      R+              + +    G     + ++
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEV 532
            PE    G  T KTD +S+GV++ E+
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEI 279

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 337 EFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEF 391
           ++ + E +  T+  F   R+LG+G FG V      ++G + A K+ +        G+   
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 392 LAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV--LLSWYH 449
           L E  I+  +  + +V L      K  L LV   M  G L   +Y   + G     + ++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTL 498
              I  GL      LH+E   ++++RD+K  NI+LD + + R+             +   
Sbjct: 292 AAEICCGLED----LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIER 541
             GT+GY+APE ++    T   D ++ G ++ E+  G+ P ++
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 123 ---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 180 KYYSTA---VDIWSLGCIFAEMVTRR 202

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+ + +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+ + +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLV 407
           ++LG+G+FG V+   K     SG + A+K  K +      +     E  I+A + H  +V
Sbjct: 34  KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      +G+L L+ +++  G L   L ++    V+ +       +  LA  L +LH  
Sbjct: 94  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALGLDHLHS- 148
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYG 514
               +I+RD+K  NI+LD   + +L + F L+              GT+ Y+APE +   
Sbjct: 149 --LGIIYRDLKPENILLDEEGHIKL-TDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
             +   D +SYGV++ E+  G  P + +     M  ++    G+
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 69  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 125
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 126 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 183 KYYSTA---VDIWSLGCIFAEMVTRR 205

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYL 464
           V+LL     + +L LV+E++   S+D   + D+    G+ L      + +  L   L + 
Sbjct: 66  VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL- 511
           H     +V+HRD+K  N++++     +L              ++     T+ Y APE L 
Sbjct: 121 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 512 ---QYGTATEKTDVFSYGVVVLEVACGR 536
               Y TA    D++S G +  E+   R
Sbjct: 178 GCKYYSTA---VDIWSLGCIFAEMVTRR 202

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSK-HSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG V       +G   AVK   R K  S +   +   E+  +   RH ++++L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             +   +  +V EY+  G L   +    ++G +     R  +   + SA+ Y H+     
Sbjct: 79  VISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEAR-RLFQQILSAVDYCHR---HM 131
Query: 472 VIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT-ATEK 519
           V+HRD+K  N++LDA+ NA++          +  F  T+ G+  Y APE +     A  +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE 191
Query: 520 TDVFSYGVVVLEVACGRRPIERE 542
            D++S GV++  + CG  P + E
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDE 214

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSK-HSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG V       +G   AVK   R K  S +   +   E+  +   RH ++++L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
             +   +  +V EY+  G L   +    ++G +     R  +   + SA+ Y H+     
Sbjct: 79  VISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEAR-RLFQQILSAVDYCHR---HM 131
Query: 472 VIHRDIKASNIMLDANFNARLESSFTL------------TAGTMGYLAPEYLQYGT-ATE 518
           V+HRD+K  N++LDA+ NA++ + F L            + G+  Y APE +     A  
Sbjct: 132 VVHRDLKPENVLLDAHMNAKI-ADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 519 KTDVFSYGVVVLEVACGRRPIERE 542
           + D++S GV++  + CG  P + E
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDE 214

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 337 EFSYRELRSATRG-FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----GKTEF 391
           ++ + E +  T+  F   R+LG+G FG V      ++G + A K+ +        G+   
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 392 LAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV--LLSWYH 449
           L E  I+  +  + +V L      K  L LV   M  G L   +Y   + G     + ++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTL 498
              I  GL      LH+E   ++++RD+K  NI+LD + + R+             +   
Sbjct: 292 AAEICCGLED----LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIER 541
             GT+GY+APE ++    T   D ++ G ++ E+  G+ P ++
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L   +   +  G+ L      + +  L   L + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 120
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++T    T+ Y APE L   
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 178 KYYSTA---VDIWSLGCIFAEMVTRR 200

>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRN-GVIGLTRELGVPASSSGSLIYNNPVPFFDQEXX 80
           SN+ +F+  +FN  N+ L GD+ + + G + LT   G    S G   Y+ P+   D+   
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60
Query: 81  XXXXXXXXXXXXINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKF-VAI 139
                       IN  N  +   GLAF + P        G  LGL N++   ++   VA+
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAV 120
Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
            FDT           N I +D++S+  I T        + +   V   +   KNDLR+  
Sbjct: 121 VFDTV---------SNRIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSL 171
Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSA---STEGSTELHMIQSWSFQTS 253
           ++ S      V+  + +  ++  ++     VGFSA   S + +TE H + SWSF ++
Sbjct: 172 LYPSSEEKCHVSATVPLEKEVEDWVS----VGFSATSGSKKETTETHNVLSWSFSSN 224

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 122
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 123 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 180 KYYSTA---VDIWSLGCIFAEMVTRR 202

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 50/236 (21%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIAC 400
           R   R +   + LG+GA+G V+K+    +G V AVK+   + +  T+      E+ I+  
Sbjct: 5   RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 401 LR-HKNLVQLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
           L  H+N+V LL         ++ LV++YM    L  ++  +     +L   H+  +V  L
Sbjct: 65  LSGHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN-----ILEPVHKQYVVYQL 118
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-----LESSF---------------- 496
              + YLH      ++HRD+K SNI+L+A  + +     L  SF                
Sbjct: 119 IKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 497 ------------TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPI 539
                       T    T  Y APE L   T  T+  D++S G ++ E+ CG +PI
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++  Y   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYL 464
           V+LL     + +L LV+E++   S+D   + D+    G+ L      + +  L   L + 
Sbjct: 68  VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL- 511
           H     +V+HRD+K  N++++     +L              ++     T+ Y APE L 
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 512 ---QYGTATEKTDVFSYGVVVLEVACGR 536
               Y TA    D++S G +  E+   R
Sbjct: 180 GCKYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G V+KA    +  + A+KR +   + +   +  L E+ ++  L+HKN+V+L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                +L LV+E+      D   Y DS NG L     + + +  L   L + H    + V
Sbjct: 70  LHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLGFCHS---RNV 122
Query: 473 IHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTATEKT 520
           +HRD+K  N++++ N   +L               ++    T+ Y  P+ L +G     T
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL-FGAKLYST 181
Query: 521 --DVFSYGVVVLEVACGRRPI 539
             D++S G +  E+A   RP+
Sbjct: 182 SIDMWSAGCIFAELANAARPL 202

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 28/216 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLA-ELSIIACLRHKNLVQ 408
           ++G+GAF  V +     +G   AVK     +   S    TE L  E SI   L+H ++V+
Sbjct: 31  VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           LL   +  G L +V+E+M    L   + + ++ G + S     + +  +  AL Y H   
Sbjct: 91  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 147
Query: 469 EQQVIHRDIKASNIMLDANFNA------------RLESSFTLTAGTMG---YLAPEYLQY 513
           +  +IHRD+K  N++L +  N+            +L  S  +  G +G   ++APE ++ 
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI----ERETEG 545
               +  DV+  GV++  +  G  P     ER  EG
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 243

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L + +   +  G+ L      + +  L   L + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 125 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 182 KYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYL 464
           V+LL     + +L LV+E++   S+D   + D+    G+ L      + +  L   L + 
Sbjct: 67  VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 121
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL- 511
           H     +V+HRD+K  N++++     +L              ++     T+ Y APE L 
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 512 ---QYGTATEKTDVFSYGVVVLEVACGR 536
               Y TA    D++S G +  E+   R
Sbjct: 179 GCKYYSTA---VDIWSLGCIFAEMVTRR 203

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G +  VYK     + ++ A+K  +  HE       + E+S++  L+H N+V L    
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +  L LV+EY     LD+ L Q  ++ G +++ ++    +  L   L Y H+   Q+V
Sbjct: 70  HTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKV 121
Query: 473 IHRDIKASNIMLD-------ANFN-ARLESSFTLTAG----TMGYLAPEYLQYGTA-TEK 519
           +HRD+K  N++++       A+F  AR +S  T T      T+ Y  P+ L   T  + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 520 TDVFSYGVVVLEVACGR 536
            D++  G +  E+A GR
Sbjct: 182 IDMWGVGCIFYEMATGR 198

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 31  IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L            +    ++  +   L YLH E   + I
Sbjct: 91  LKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEILKGLDYLHSE---KKI 142
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L    + +L         T T        GT  ++APE +Q      K D
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G+  +E+A G  P
Sbjct: 203 IWSLGITAIELAKGEPP 219

>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 36  NITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQEXXXXXXXXXXXXXXINN 95
           N+   G  Y     + LT+ +    ++ G  +Y+ P+  +D E              I+ 
Sbjct: 18  NLIFQGGGYTTKEKLTLTKAV---KNTVGRALYSLPIHIWDSETGNVADFTTTFIFVIDA 74
Query: 96  VNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN-KFVAIEFDTRLDPHFDDPD- 153
            N  +  DG  FFI+P +    + GG LG+ N     K  + VA+EFDT  +  +D  + 
Sbjct: 75  PNGYNVADGFTFFIAPVDTKPQTGGGYLGVFNGKDYDKTAQTVAVEFDTFYNAAWDPSNG 134
Query: 154 ENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSN 206
           + HIG+D+++++SI T     +  +L++G      I +     +L V + Y N
Sbjct: 135 KRHIGIDVNTIKSIST-----KSWNLQNGEEAHVAISFNATTNVLSVTLLYPN 182

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSHEGK--TEFLAELSIIACL-RHKN 405
           LG GAFG V  A                AVK  K     K  ++ ++E+ ++  + +HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++  Y   G+L   L      G+             +++   ++ 
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              LA  + YL     Q+ IHRD+ A N+++  N N    + F L             T 
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTN 218
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G V+KA    +  + A+KR +   + +   +  L E+ ++  L+HKN+V+L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                +L LV+E+      D   Y DS NG L     + + +  L   L + H    + V
Sbjct: 70  LHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLGFCHS---RNV 122
Query: 473 IHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTATEKT 520
           +HRD+K  N++++ N   +L +             ++    T+ Y  P+ L +G     T
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL-FGAKLYST 181
Query: 521 --DVFSYGVVVLEVACGRRPI 539
             D++S G +  E+A   RP+
Sbjct: 182 SIDMWSAGCIFAELANAGRPL 202

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-GKTEFLAELSIIACLRHKNLVQLLGWCA 414
           LG GAFG V++    ++G V   K     +   K     E+SI+  L H  L+ L     
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 415 EKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
           +K E++L+ E++  G L DR+  +D +    +S    +N +      L ++H   E  ++
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK----MSEAEVINYMRQACEGLKHMH---EHSIV 171
Query: 474 HRDIKASNIM-----------LDANFNARL--ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           H DIK  NIM           +D     +L  +    +T  T  + APE +        T
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 521 DVFSYGVVVLEVACGRRPI--ERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           D+++ GV+   +  G  P   E + E  + V   DW +   A   +   A   +     +
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK 291
Query: 579 DEMKRLLL 586
           +  KRL +
Sbjct: 292 EPRKRLTV 299

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L +   L
Sbjct: 73  CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG VYK     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L    + G L   Y    I+  +   L YLH E   + I
Sbjct: 87  LKSTKLWIIMEYLGGGSALDLL----KPGPLEETY-IATILREILKGLDYLHSE---RKI 138
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L    + +L         T T        GT  ++APE ++      K D
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G+  +E+A G  P
Sbjct: 199 IWSLGITAIELAKGEPP 215

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 17  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 73
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 74  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 132
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 133 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 189 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 221

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 42/206 (20%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA   S G + A+KR +   E +   +  + E+S++  L H N+V L+  
Sbjct: 29  VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 413 CAEKGELLLVYEYMPNGSLDRML------YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
              +  L LV+E+M    L ++L       QDS+  + L           L   + + HQ
Sbjct: 88  IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYL---------YQLLRGVAHCHQ 137
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +++HRD+K  N++++++   +L              S+T    T+ Y AP+ L   
Sbjct: 138 ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
            +Y T+    D++S G +  E+  G+
Sbjct: 195 KKYSTS---VDIWSIGCIFAEMITGK 217

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 333 PGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKT 389
           P PR       +     F   +ILG G+F  V  A   ++    A+K  +  H   E K 
Sbjct: 2   PQPR-------KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV 54
Query: 390 EFLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
            ++  E  +++ L H   V+L     +  +L     Y  NG L + + +        + +
Sbjct: 55  PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF 114
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ES 494
           +   IV    SAL YLH    + +IHRD+K  NI+L+ + + ++              ++
Sbjct: 115 YTAEIV----SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 167
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                 GT  Y++PE L   +A + +D+++ G ++ ++  G  P
Sbjct: 168 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEF-LAELSIIA 399
           R     F+   +LG+G+FG V  A    +  + A+K  K      +   E  + E  ++A
Sbjct: 15  RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 400 CLRHKNLVQLLGWCAEK-GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
            L     +  L  C +    L  V EY+  G L   + Q  +     + ++   I +GL 
Sbjct: 75  LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGL- 133
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGY 505
               +LH+   + +I+RD+K  N+MLD+  + ++ + F +               GT  Y
Sbjct: 134 ---FFLHK---RGIIYRDLKLDNVMLDSEGHIKI-ADFGMCKEHMMDGVTTREFCGTPDY 186
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           +APE + Y    +  D ++YGV++ E+  G+ P + E E
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE 225

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 29  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 85
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 86  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 144
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 201 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 233

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L   +   +  G+ L      + +  L   L + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 121
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 122 ---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 179 KYYSTA---VDIWSLGCIFAEMVTRR 201

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 333 PGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKT 389
           P PR       +     F   +ILG G+F  V  A   ++    A+K  +  H   E K 
Sbjct: 1   PQPR-------KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV 53
Query: 390 EFLA-ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
            ++  E  +++ L H   V+L     +  +L     Y  NG L + + +        + +
Sbjct: 54  PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF 113
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ES 494
           +   IV    SAL YLH    + +IHRD+K  NI+L+ + + ++              ++
Sbjct: 114 YTAEIV----SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 166
Query: 495 SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
                 GT  Y++PE L   +A + +D+++ G ++ ++  G  P
Sbjct: 167 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 24  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 80
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 81  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 139
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 196 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 228

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L +   L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 42/206 (20%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G G +G VYKA   S G + A+KR +   E +   +  + E+S++  L H N+V L+  
Sbjct: 29  VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 413 CAEKGELLLVYEYMPNGSLDRML------YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
              +  L LV+E+M    L ++L       QDS+  + L           L   + + HQ
Sbjct: 88  IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYL---------YQLLRGVAHCHQ 137
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +++HRD+K  N++++++   +L              S+T    T+ Y AP+ L   
Sbjct: 138 ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
            +Y T+    D++S G +  E+  G+
Sbjct: 195 KKYSTS---VDIWSIGCIFAEMITGK 217

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 354 RILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG+G+FG V+     S        ++  +K++      +     E  I+  + H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      +G+L L+ +++  G L   L ++    V+ +       +  LA AL +LH  
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS- 144
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYG 514
               +I+RD+K  NI+LD   + +L + F L+              GT+ Y+APE +   
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
             T+  D +S+GV++ E+  G  P + +     M  ++    G+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 35  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 91
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 92  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 150
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 151 FRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 207 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 239

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 29  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 75
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 76  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 136 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 190
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 191 NVSXICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG----KTEFLAELSIIA 399
           AT  +     +G GA+G VYKA    SG   A+K  R  +  EG        +A L  + 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 CLRHKNLVQLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
              H N+V+L+  CA      + ++ LV+E++     D   Y D      L      +++
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM 503
                 L +LH  C   ++HRD+K  NI++ +    +L           + +      T+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            Y APE L   T     D++S G +  E+   R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+ +   E +   +  + E+S++  L H N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++ +  L   +   +  G+ L      + +  L   L + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCHS 124
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYL--- 511
               +V+HRD+K  N++++     +L              ++     T+ Y APE L   
Sbjct: 125 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 512 -QYGTATEKTDVFSYGVVVLEVACGR 536
             Y TA    D++S G +  E+   R
Sbjct: 182 KYYSTA---VDIWSLGCIFAEMVTRR 204

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 353 NRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL   
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE-- 486
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEYL 511
            E   +HRD+ A N++L     A++ S F L+           A T G     + APE +
Sbjct: 487 -ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVD 553
            Y   + K+DV+S+GV++ E  + G++P  R  +G ++  +++
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLE 586

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+       K     EL I+  L H
Sbjct: 20  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH 76
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L  +  L
Sbjct: 77  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 135
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 136 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 192 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 224

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 353 NRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL   
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE-- 487
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEYL 511
            E   +HRD+ A N++L     A++ S F L+           A T G     + APE +
Sbjct: 488 -ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 512 QYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVD 553
            Y   + K+DV+S+GV++ E  + G++P  R  +G ++  +++
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLE 587

>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms Length = 237

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VDKRLSAVVSYPNADSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 61/290 (21%)
Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-R 402
           T  FH    +G G FG+V+K      G + A+KRSK    G  +    L E+   A L +
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL---NIVVGLAS 459
           H ++V+     AE   +L+  EY   GSL   +   SEN  ++S++      ++++ +  
Sbjct: 68  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 124
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANF--NARLE------------------------ 493
            L Y+H      ++H DIK SNI +      NA  E                        
Sbjct: 125 GLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 494 -SSFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
            SS  +  G   +LA E LQ   T   K D+F+  + V+  A G  P+ R  +       
Sbjct: 182 ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ------ 234
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
               W    +GR+      R+    ++ E   LL V +   +PD   RPS
Sbjct: 235 ----WHEIRQGRL-----PRIPQVLSQ-EFTELLKVMI---HPDPERRPS 271

>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native Concanavalin A Using Rapid Laue Data Collection Methods And The Introduction Of A Monochromatic Large-Angle Oscillation Technique (Lot) Length = 237

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VDKRLSAVVSYPNADSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG----KTEFLAELSIIA 399
           AT  +     +G GA+G VYKA    SG   A+K  R  +  EG        +A L  + 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 CLRHKNLVQLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
              H N+V+L+  CA      + ++ LV+E++     D   Y D      L      +++
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM 503
                 L +LH  C   ++HRD+K  NI++ +    +L           + +      T+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            Y APE L   T     D++S G +  E+   R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 61/290 (21%)
Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-R 402
           T  FH    +G G FG+V+K      G + A+KRSK    G  +    L E+   A L +
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL---NIVVGLAS 459
           H ++V+     AE   +L+  EY   GSL   +   SEN  ++S++      ++++ +  
Sbjct: 68  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 124
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANF--NARLE------------------------ 493
            L Y+H      ++H DIK SNI +      NA  E                        
Sbjct: 125 GLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 494 -SSFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
            SS  +  G   +LA E LQ   T   K D+F+  + V+  A G  P+ R  +       
Sbjct: 182 ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ------ 234
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
               W    +GR+      R+    ++ E   LL V +   +PD   RPS
Sbjct: 235 ----WHEIRQGRL-----PRIPQVLSQ-EFTELLKVMI---HPDPERRPS 271

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 99  FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 154
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 155 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPF 239

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 61/290 (21%)
Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-R 402
           T  FH    +G G FG+V+K      G + A+KRSK    G  +    L E+   A L +
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL---NIVVGLAS 459
           H ++V+     AE   +L+  EY   GSL   +   SEN  ++S++      ++++ +  
Sbjct: 66  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 122
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANF--NARLE------------------------ 493
            L Y+H      ++H DIK SNI +      NA  E                        
Sbjct: 123 GLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 179
Query: 494 -SSFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
            SS  +  G   +LA E LQ   T   K D+F+  + V+  A G  P+ R  +       
Sbjct: 180 ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-XAAGAEPLPRNGDQ------ 232
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
               W    +GR+      R+    ++ E   LL V +   +PD   RPS
Sbjct: 233 ----WHEIRQGRL-----PRIPQVLSQ-EFTELLKVMI---HPDPERRPS 269

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 61/290 (21%)
Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-R 402
           T  FH    +G G FG+V+K      G + A+KRSK    G  +    L E+   A L +
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL---NIVVGLAS 459
           H ++V+     AE   +L+  EY   GSL   +   SEN  ++S++      ++++ +  
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 126
Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANF--NARLE------------------------ 493
            L Y+H      ++H DIK SNI +      NA  E                        
Sbjct: 127 GLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 494 -SSFTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
            SS  +  G   +LA E LQ   T   K D+F+  + V+  A G  P+ R  +       
Sbjct: 184 ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQ------ 236
Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
               W    +GR+      R+    ++ E   LL V +   +PD   RPS
Sbjct: 237 ----WHEIRQGRL-----PRIPQVLSQ-EFTELLKVMI---HPDPERRPS 273

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+     +GK     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L +   L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             LS    ++ 
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLD-------ANFN-AR----LESSFTLTAG 501
              +A  + YL     ++ IHRD+ A N+++        A+F  AR    ++     T G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 502 TM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+     +GK     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L +   L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 350 FHSNRILGRGAFGNVYKAY--FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +H    +G G +G VYKA   +  + ++  ++  K      +  + E+SI+  L+H N+V
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K  L+LV+E++ +  L ++L  D   G L S   + + ++ L + + Y H  
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCH-- 117
Query: 468 CEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGT 515
            +++V+HRD+K  N++++     ++               +T    T+ Y AP+ L    
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 516 ATEKT-DVFSYGVVVLEVACG 535
               T D++S G +  E+  G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 29  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 75
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 76  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 136 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 190
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 191 NVSXICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 69  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 124
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 125 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPP 208

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 125
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP 209

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 51  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 97
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 98  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 158 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 212
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 213 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 31/198 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL----RHKNLVQL-L 410
           LG G++G V+K      G + AVKRS     G  +   +L+ +       +H   V+L  
Sbjct: 65  LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECE 469
            W  E+G +L +   +   SL     Q  E  G  L        +     AL +LH    
Sbjct: 125 AW--EEGGILYLQTELCGPSLQ----QHCEAWGASLPEAQVWGYLRDTLLALAHLH---S 175
Query: 470 QQVIHRDIKASNIMLDANFNARL-ESSFTLTAGTMG----------YLAPEYLQ--YGTA 516
           Q ++H D+K +NI L      +L +    +  GT G          Y+APE LQ  YGTA
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTA 235
Query: 517 TEKTDVFSYGVVVLEVAC 534
               DVFS G+ +LEVAC
Sbjct: 236 ---ADVFSLGLTILEVAC 250

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 44/207 (21%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G++ AVK+ +HS  + + +F  E+ I+  L    +V+  
Sbjct: 15  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 411 G--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G  +   + EL LV EY+P+G L   L +           HR  +    +  L Y  Q C
Sbjct: 75  GVSYGPGRPELRLVMEYLPSGCLRDFLQR-----------HRARL--DASRLLLYSSQIC 121
Query: 469 E-------QQVIHRDIKASNIMLDANFNARLESSFTLTA----------------GTMGY 505
           +       ++ +HRD+ A NI++++  + ++ + F L                    + +
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKI-ADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
            APE L     + ++DV+S+GVV+ E+
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYEL 207

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 45  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 91
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 92  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 151
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 152 VKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 206
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 207 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 248

>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin (Cgl): A Tetrameric Cona-Like Lectin Length = 237

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP+  HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VGKRLSAVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis Length = 237

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VGKRLSAVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 31  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 144
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 51  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 97
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 98  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 158 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 212
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 213 NVSXICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 31  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 144
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 145 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--------------GTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++    T                 GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A++ +D+++ G ++ ++  G  P 
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPF 234

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 350 FHSNRILGRGAFGNVYKAY--FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +H    +G G +G VYKA   +  + ++  ++  K      +  + E+SI+  L+H N+V
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K  L+LV+E++ +  L ++L  D   G L S   + + ++ L + + Y H  
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCH-- 117
Query: 468 CEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGT 515
            +++V+HRD+K  N++++     ++               +T    T+ Y AP+ L    
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 516 ATEKT-DVFSYGVVVLEVACG 535
               T D++S G +  E+  G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 354 RILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG+G+FG V+     S        ++  +K++      +     E  I+  + H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      +G+L L+ +++  G L   L ++    V+ +       +  LA AL +LH  
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS- 144
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYG 514
               +I+RD+K  NI+LD   + +L + F L+              GT+ Y+APE +   
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
             T+  D +S+GV++ E+  G  P + +     M  ++    G+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 22  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 68
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 69  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 129 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 183
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 184 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 225

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 29  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 89  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 142
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 143 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 228

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 53  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 99
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 100 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 159
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 160 VKL-YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 214
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 215 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 256

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLA-ELSIIACLRHKNLV 407
           F     LG GAF  V  A   ++G + AVK   K + +GK   +  E++++  ++H+N+V
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 408 QLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
            L         L LV + +  G L DR++    E G   +      ++  +  A+ YLH+
Sbjct: 84  ALEDIYESPNHLYLVMQLVSGGELFDRIV----EKG-FYTEKDASTLIRQVLDAVYYLHR 138
Query: 467 ECEQQVIHRDIKASNIM----------LDANFN-ARLESS---FTLTAGTMGYLAPEYLQ 512
                ++HRD+K  N++          + ++F  +++E      +   GT GY+APE L 
Sbjct: 139 ---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 195
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
               ++  D +S GV+   + CG  P   E +
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 227

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 55  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 101
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 102 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 161
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 162 VKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 216
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 217 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 258

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     +   +++G G+FG VY+A    SG + A+K+     +GK     EL I+  L H
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDH 72
Query: 404 KNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
            N+V+L  +    GE      L LV +Y+P        +       L   Y +L +   L
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG--------TMG 504
             +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G        +  
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 505 YLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
           Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 354 RILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG+G+FG V+     S        ++  +K++      +     E  I+  + H  +V
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      +G+L L+ +++  G L   L ++    V+ +       +  LA AL +LH  
Sbjct: 91  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS- 145
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYG 514
               +I+RD+K  NI+LD   + +L + F L+              GT+ Y+APE +   
Sbjct: 146 --LGIIYRDLKPENILLDEEGHIKL-TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
             T+  D +S+GV++ E+  G  P + +     M  ++    G+
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 246

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 150
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 47/210 (22%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y      +G + AVK  K     + ++ +  E+ I+  L H+++V
Sbjct: 14  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C ++GE  + LV EY+P GSL   L +                 VGLA  L +  
Sbjct: 74  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---------------CVGLAQLLLFAQ 118
Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------- 502
           Q CE       Q  IHR + A N++LD +   ++   F L                    
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI-GDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + + APE L+       +DV+S+GV + E+
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYEL 207

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 97  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 152
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 153 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPP 236

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 47/210 (22%)
Query: 354 RILGRGAFGNV----YKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLV 407
           R LG G FG V    Y      +G + AVK  K     + ++ +  E+ I+  L H+++V
Sbjct: 15  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 408 QLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +  G C ++GE  + LV EY+P GSL   L +                 VGLA  L +  
Sbjct: 75  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---------------CVGLAQLLLFAQ 119
Query: 466 QECE-------QQVIHRDIKASNIMLDANFNARLESSFTLTAGT---------------- 502
           Q CE       Q  IHR + A N++LD +   ++   F L                    
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI-GDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + + APE L+       +DV+S+GV + E+
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYEL 208

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY +           +++G G+FG VY+A    SG + A+K+       K     E
Sbjct: 96  PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 142
Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +       L   Y
Sbjct: 143 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 202
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAG-- 501
            +L  +  L  +L Y+H      + HRDIK  N++LD +  A L+     S+  L  G  
Sbjct: 203 VKL-YMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEP 257
Query: 502 ------TMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGR 536
                 +  Y APE L +G    T   DV+S G V+ E+  G+
Sbjct: 258 NVSYICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 299

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEG----KTEFLAELSIIA 399
           AT  +     +G GA+G VYKA    SG   A+K  R  +  EG        +A L  + 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 CLRHKNLVQLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
              H N+V+L+  CA      + ++ LV+E++     D   Y D      L      +++
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM 503
                 L +LH  C   ++HRD+K  NI++ +    +L           + +      T+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            Y APE L   T     D++S G +  E+   R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 350 FHSNRILGRGAFGNVYKAY--FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +H    +G G +G VYKA   +  + ++  ++  K      +  + E+SI+  L+H N+V
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L      K  L+LV+E++ +  L ++L  D   G L S   + + ++ L + + Y H  
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCH-- 117
Query: 468 CEQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGT 515
            +++V+HRD+K  N++++     ++               +T    T+ Y AP+ L    
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 516 ATEKT-DVFSYGVVVLEVACG 535
               T D++S G +  E+  G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 149
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 150 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 128
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 76  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 131
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 132 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPP 215

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 9   EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 69  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 122
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 123 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 208

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 150
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--------------GTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++    T                 GT  Y++PE L
Sbjct: 151 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 81  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 134
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRP 538
              +A + +D+++ G ++ ++  G  P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin From Seeds Of The Canavalia Maritima (Conm) Length = 237

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VGKRLSAVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 128
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 129 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 352 SNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            ++ LG G FG V K Y+       + +V  +K   +    K E LAE +++  L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL  
Sbjct: 71  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLE- 124
Query: 467 ECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMG-----YLAPEY 510
             E   +HRD+ A N++L     A++ S F L+           A T G     + APE 
Sbjct: 125 --ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 511 LQYGTATEKTDVFSYGVVVLEV-ACGRRP 538
           + Y   + K+DV+S+GV++ E  + G++P
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 210

>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima Seeds (Conm) In Complex With Man1-2man-Ome Length = 237

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    T  +  ++DL   L   + VG SAST    E + I SWSF +
Sbjct: 57  VGKRLSAVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 35  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L    E G L        I+  +   L YLH E   + I
Sbjct: 95  LKDTKLWIIMEYLGGGSALDLL----EPGPL-DETQIATILREILKGLDYLHSE---KKI 146
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L         T T        GT  ++APE ++      K D
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKM 548
           ++S G+  +E+A G  P    +E H M
Sbjct: 207 IWSLGITAIELARGEPP---HSELHPM 230

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 146
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF 231

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L    E G L        I+  +   L YLH E   + I
Sbjct: 90  LKDTKLWIIMEYLGGGSALDLL----EPGPL-DETQIATILREILKGLDYLHSE---KKI 141
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L         T T        GT  ++APE ++      K D
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKM 548
           ++S G+  +E+A G  P    +E H M
Sbjct: 202 IWSLGITAIELARGEPP---HSELHPM 225

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 NRILGRGAFGNVYKAYFASSGSV---AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLV 407
           NRILG G FG VY+  + +        AVK  K   + + K +F++E  I+  L H ++V
Sbjct: 29  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQ 466
           +L+G   E+    ++ E  P G L   L ++  +  VL    + L I      A+ YL  
Sbjct: 89  KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI----CKAMAYLES 143
Query: 467 ECEQQVIHRDIKASNIML---------DANFNARLES----SFTLTAGTMGYLAPEYLQY 513
                 +HRDI   NI++         D   +  +E       ++T   + +++PE + +
Sbjct: 144 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 514 GTATEKTDVFSYGVVVLEV-ACGRRP 538
              T  +DV+ + V + E+ + G++P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP 226

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 49/293 (16%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSK-------HSHEGKTE-FLAELSIIACLRHK 404
           N  LG+G F  ++K      G    +  ++        +H   +E F    S+++ L HK
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +LV   G C    E +LV E++  GSLD  L + ++N + + W  +L +   LA+A+ +L
Sbjct: 73  HLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 465 HQECEQQVIHRDIKASNIML---------DANFNARLESSFTLTA-------GTMGYLAP 508
               E  +IH ++ A NI+L         +  F    +   ++T          + ++ P
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 509 EYLQYGTATE-KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
           E ++        TD +S+G  + E+  G         G K ++ +D      ++ ++   
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFY 231
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK 620
            D+    A    E+  L+    +C + +   RPS R + + LN+   P +VP+
Sbjct: 232 EDRHQLPAPKAAELANLI---NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 NRILGRGAFGNVYKAYFASSGSV---AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLV 407
           NRILG G FG VY+  + +        AVK  K   + + K +F++E  I+  L H ++V
Sbjct: 13  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQ 466
           +L+G   E+    ++ E  P G L   L ++  +  VL    + L I      A+ YL  
Sbjct: 73  KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI----CKAMAYLES 127
Query: 467 ECEQQVIHRDIKASNIML---------DANFNARLES----SFTLTAGTMGYLAPEYLQY 513
                 +HRDI   NI++         D   +  +E       ++T   + +++PE + +
Sbjct: 128 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 514 GTATEKTDVFSYGVVVLEV-ACGRRP 538
              T  +DV+ + V + E+ + G++P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP 210

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I A L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L     +   ++      I+  +   L YLH E   + I
Sbjct: 75  LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE---KKI 126
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L         T T        GT  ++APE ++      K D
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKM 548
           ++S G+  +E+A G  P    +E H M
Sbjct: 187 IWSLGITAIELARGEPP---HSELHPM 210

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L     +   ++      I+  +   L YLH E   + I
Sbjct: 75  LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE---KKI 126
Query: 474 HRDIKASNIMLDANFNARLES-----SFTLT-------AGTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L         T T        GT  ++APE ++      K D
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 522 VFSYGVVVLEVACGRRPIERETEGHKM 548
           ++S G+  +E+A G  P    +E H M
Sbjct: 187 IWSLGITAIELARGEPP---HSELHPM 210

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 NRILGRGAFGNVYKAYFASSGSV---AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLV 407
           NRILG G FG VY+  + +        AVK  K   + + K +F++E  I+  L H ++V
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQ 466
           +L+G   E+    ++ E  P G L   L ++  +  VL    + L I      A+ YL  
Sbjct: 77  KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI----CKAMAYLES 131
Query: 467 ECEQQVIHRDIKASNIML---------DANFNARLES----SFTLTAGTMGYLAPEYLQY 513
                 +HRDI   NI++         D   +  +E       ++T   + +++PE + +
Sbjct: 132 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 514 GTATEKTDVFSYGVVVLEV-ACGRRP 538
              T  +DV+ + V + E+ + G++P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP 214

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSI---IACLR 402
           AT  +     +G GA+G VYKA    SG   A+K  +  + G       +S    +A LR
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 403 ------HKNLVQLLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL 451
                 H N+V+L+  CA      + ++ LV+E++     D   Y D      L      
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIK 123
Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTA 500
           +++      L +LH  C   ++HRD+K  NI++ +    +L           + + T   
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180
Query: 501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            T+ Y APE L   T     D++S G +  E+   R+P+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 218

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------------I 453
           ++ LLG C + G L ++ EY   G+L   L      G+  S+    N             
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 211
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 146
Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA--------------GTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++    T                 GT  Y++PE L
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF 231

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 43/212 (20%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +  RG FG V+KA   +      +   +     + E+  E+  +  ++H+N++Q +G  A
Sbjct: 31  VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG--A 86
Query: 415 EKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           EK       +L L+  +   GSL   L  +     ++SW    +I   +A  L YLH++ 
Sbjct: 87  EKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDI 141
Query: 469 -------EQQVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYL 506
                  +  + HRDIK+ N++L  N  A + + F L                 GT  Y+
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACI-ADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 507 APEYLQYGT-----ATEKTDVFSYGVVVLEVA 533
           APE L+        A  + D+++ G+V+ E+A
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 25  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------------I 453
           ++ LLG C + G L ++ EY   G+L   L      G+  S+    N             
Sbjct: 85  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 200
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 354 RILGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RH 403
           + LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +H
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN----------- 452
           KN++ LLG C + G L ++ EY   G+L   L      G+  S+    N           
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 453 -IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL------------- 498
                +A  + YL     ++ IHRD+ A N+++  + N    + F L             
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKT 250
Query: 499 TAGTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           T G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286

>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The Metal- Binding Region Length = 237

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       +++ G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQDGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    +  +  ++DL+  L   + VG SAST    E + I SWSF +
Sbjct: 57  VDKRLSAVVSYPNADATS--VSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of Concanavalin A, Iv.Atomic Coordinates,Hydrogen Bonding,And Quaternary Structure Length = 237

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       +++ G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQDGKVGTAHIIYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY N    +  +  ++DL+  L   + VG SAST    E + I SWSF +
Sbjct: 57  VDKRLSAVVSYPNADATS--VSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 29  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------------I 453
           ++ LLG C + G L ++ EY   G+L   L      G+  S+    N             
Sbjct: 89  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 204
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------------I 453
           ++ LLG C + G L ++ EY   G+L   L      G+  S+    N             
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 211
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             LS    ++ 
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 196
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 28  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------------I 453
           ++ LLG C + G L ++ EY   G+L   L      G+  S+    N             
Sbjct: 88  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 203
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237

>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 4   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTAHISYNS 58
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 59  VAKRLSAVVSYSGTSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115

>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 4   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTAHISYNS 58
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 59  VAKRLSAVVSYSGTSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 41/214 (19%)
Query: 356 LGRGAFGNVYKAYF-------ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +HKN
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNI 453
           ++ LLG C + G L ++ EY   G+L   L      G+             LS    ++ 
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL-------------TA 500
              +A  + YL     ++ IHRD+ A N+++  + N    + F L             T 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTN 211
Query: 501 GTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           G +   ++APE L     T ++DV+S+GV++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 356 LGRGAFGNVYKAY-FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH------KNLVQ 408
           +G GA+G V+KA    + G   A+KR +     +   L+ +  +A LRH       N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 409 LLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           L   C       + +L LV+E++ +  L   L +  E GV        +++  L   L +
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDF 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQ 512
           LH     +V+HRD+K  NI++ ++   +L           + + T    T+ Y APE L 
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIER 541
             +     D++S G +  E+   R+P+ R
Sbjct: 193 QSSYATPVDLWSVGCIFAEMF-RRKPLFR 220

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLA-ELSIIACLRHKN 405
           F   +ILG G+F     A   ++    A+K  +  H   E K  ++  E  +++ L H  
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +        + ++   IV    SAL YLH
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLH 147
Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 148 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              +A + +D+++ G ++ ++  G  P 
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF + 
Sbjct: 57  VAKRLTAVVSYSGSSSTT--VSYDVDLTNVLPEWVRVGLSATTGLYKETNTILSWSFTS- 113
Query: 254 GFRPVRPKLHPHNVSDSSVV 273
                  KL  ++++D++ +
Sbjct: 114 -------KLKTNSIADANAL 126

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F     LGRGA   VY+     +    A+K  K + + K     E+ ++  L H N+++L
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-VRTEIGVLLRLSHPNIIKL 113
Query: 410 LGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                   E+ LV E +  G L DR++    E G   S     + V  +  A+ YLH   
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIV----EKG-YYSERDAADAVKQILEAVAYLH--- 165
Query: 469 EQQVIHRDIKASNIML------------DANFNARLESSFTL--TAGTMGYLAPEYLQYG 514
           E  ++HRD+K  N++             D   +  +E    +    GT GY APE L+  
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC 225
Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERE 542
               + D++S G++   + CG  P   E
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDE 253

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 57/291 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV--------LLSWYHRLNIVVGLA 458
            LLG C + G  L+++ E+   G+L   L       V         L+  H +     +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTA-- 516
             + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G A  
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKI-XDFGLARDI--YKDPDYVRKGDARL 208
Query: 517 ---------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYA 560
                          T ++DV+S+GV++ E+ + G  P       +  V + +       
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFXRRLK 261
Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 262 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 303

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 354 RILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +ILG G FG+V +             +V  +K    S     EFL+E + +    H N++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 408 QLLGWCAEKG-----ELLLVYEYMPNGSLDR-MLYQDSENGVL-LSWYHRLNIVVGLASA 460
           +LLG C E       + +++  +M  G L   +LY   E G   +     L  +V +A  
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 461 LTYLHQECEQQVIHRDIKASNIML---------DANFNARLESSFTLTAGTMG-----YL 506
           + YL     +  +HRD+ A N ML         D   + ++ S      G +      ++
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVA 533
           A E L     T K+DV+++GV + E+A
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIA 243

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 68/310 (21%)
Query: 354 RILGRGAFGNVYKAY-FASSG----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           + LG G FG V KA  F   G    +  AVK  K   S     + L+E +++  + H ++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ--------------------DSENGVLLS 446
           ++L G C++ G LLL+ EY   GSL   L +                    D  +   L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT---- 502
               ++    ++  + YL    E +++HRD+ A NI++      ++ S F L+       
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKI-SDFGLSRDVYEED 204
Query: 503 -----------MGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVN 550
                      + ++A E L     T ++DV+S+GV++ E V  G  P        ++ N
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP-GIPPERLFN 263
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L+         G  +E  D         +EM RL+   L C   +   RP    VF  ++
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYRLM---LQCWKQEPDKRP----VFADIS 303
Query: 611 NEAEPLVVPK 620
            + E ++V +
Sbjct: 304 KDLEKMMVKR 313

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 352 SNRILGRGAFGNVYKAYFASSGSVAA---VKRSKHSHEGKTEFLAELSII----ACLRHK 404
           +++ LGRG F  V +    S+G   A   +K+ +   + + E L E++++    +C R  
Sbjct: 33  TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGS-----LDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
           NL ++        E++L+ EY   G      L  +    SEN V+        ++  +  
Sbjct: 93  NLHEVY---ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI-------RLIKQILE 142
Query: 460 ALTYLHQECEQQVIHRDIKASNIML------------DANFNARLESSFTL--TAGTMGY 505
            + YLHQ     ++H D+K  NI+L            D   + ++  +  L    GT  Y
Sbjct: 143 GVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEY 199
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
           LAPE L Y   T  TD+++ G++   +     P   E      +N+
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI 245

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 68/310 (21%)
Query: 354 RILGRGAFGNVYKAY-FASSG----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           + LG G FG V KA  F   G    +  AVK  K   S     + L+E +++  + H ++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ--------------------DSENGVLLS 446
           ++L G C++ G LLL+ EY   GSL   L +                    D  +   L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT---- 502
               ++    ++  + YL    E +++HRD+ A NI++      ++ S F L+       
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKI-SDFGLSRDVYEED 204
Query: 503 -----------MGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVN 550
                      + ++A E L     T ++DV+S+GV++ E V  G  P        ++ N
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP-GIPPERLFN 263
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L+         G  +E  D         +EM RL+   L C   +   RP    VF  ++
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYRLM---LQCWKQEPDKRP----VFADIS 303
Query: 611 NEAEPLVVPK 620
            + E ++V +
Sbjct: 304 KDLEKMMVKR 313

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 356 LGRGAFGNVYKAY-FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH------KNLVQ 408
           +G GA+G V+KA    + G   A+KR +     +   L+ +  +A LRH       N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 409 LLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           L   C       + +L LV+E++ +  L   L +  E GV        +++  L   L +
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDF 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQ 512
           LH     +V+HRD+K  NI++ ++   +L           + + T    T+ Y APE L 
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIER 541
             +     D++S G +  E+   R+P+ R
Sbjct: 193 QSSYATPVDLWSVGCIFAEM-FRRKPLFR 220

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG---KTEFLAELSIIACLRHKNLVQLLGW 412
           +G G++G V+K     +G + A+K+   S +    K   L E+ ++  L+H NLV LL  
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 413 CAEKGELLLVYEYMPNGSLDRM-LYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              K  L LV+EY  +  L  +  YQ      L+      +I      A+ + H+     
Sbjct: 71  FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCHK---HN 122
Query: 472 VIHRDIKASNIML---------DANFNARLESS----FTLTAGTMGYLAPEYL----QYG 514
            IHRD+K  NI++         D  F ARL +     +     T  Y +PE L    QYG
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGF-ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 515 TATEKTDVFSYGVVVLEVACG 535
                 DV++ G V  E+  G
Sbjct: 182 PP---VDVWAIGCVFAELLSG 199

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA----ELSIIACLRHKNLVQLLG 411
           LG G+FG V  A    +    A+K        K++       E+S +  LRH ++++L  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
                 ++++V EY      D ++ +       ++          +  A+ Y H+    +
Sbjct: 77  VITTPTDIVMVIEYAGGELFDYIVEKKR-----MTEDEGRRFFQQIICAIEYCHR---HK 128
Query: 472 VIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYGT-ATEK 519
           ++HRD+K  N++LD N N ++          + +F  T+ G+  Y APE +     A  +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 520 TDVFSYGVVVLEVACGRRPIERE 542
            DV+S G+V+  +  GR P + E
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDE 211

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 356 LGRGAFGNVYKAY-FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH------KNLVQ 408
           +G GA+G V+KA    + G   A+KR +     +   L+ +  +A LRH       N+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 409 LLGWCA-----EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           L   C       + +L LV+E++ +  L   L +  E GV        +++  L   L +
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDF 135
Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQ 512
           LH     +V+HRD+K  NI++ ++   +L           + + T    T+ Y APE L 
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIER 541
             +     D++S G +  E+   R+P+ R
Sbjct: 193 QSSYATPVDLWSVGCIFAEMF-RRKPLFR 220

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW 554
              E  DV+S G+V+  +  G  P ++ ++  +  +  DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS--DW 220

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 44/233 (18%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC 400
           +E++     F   +++GRGAFG V      ++  + A+K        K E L      AC
Sbjct: 67  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-----NKWEMLKRAET-AC 120
Query: 401 LRHKNLVQLLGWCA----------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWY 448
            R +  V + G C           ++  L LV +Y   G L  +L  ++D     +  +Y
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY 180
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------S 495
                +  +  A+  +HQ      +HRDIK  N++LD N + RL                
Sbjct: 181 -----IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ 232
Query: 496 FTLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
            ++  GT  Y++PE LQ      G    + D +S GV + E+  G  P   E+
Sbjct: 233 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           I  RG FG V+KA   +     AVK    + K S + + E  +       ++H+NL+Q +
Sbjct: 22  IKARGRFGCVWKAQLMND--FVAVKIFPLQDKQSWQSEREIFS----TPGMKHENLLQFI 75
Query: 411 GWCAEKG------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
              AEK       EL L+  +   GSL   L      G +++W    ++   ++  L+YL
Sbjct: 76  A--AEKRGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYL 128
Query: 465 HQE---CEQQ-----VIHRDIKASNIMLDANFNARLESSFTLT---------------AG 501
           H++   C  +     + HRD K+ N++L ++  A L + F L                 G
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVL-ADFGLAVRFEPGKPPGDTHGQVG 187
Query: 502 TMGYLAPEYLQYGT-----ATEKTDVFSYGVVVLEV 532
           T  Y+APE L+        A  + D+++ G+V+ E+
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 57/291 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV--------LLSWYHRLNIVVGLA 458
            LLG C + G  L+++ E+   G+L   L       V         L+  H +     +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTA-- 516
             + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G A  
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKGDARL 208
Query: 517 ---------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYA 560
                          T ++DV+S+GV++ E+ + G  P       +  V + +       
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRRLK 261
Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 262 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 303

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 122
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 123 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 124
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 125 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 68/310 (21%)
Query: 354 RILGRGAFGNVYKAY-FASSG----SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNL 406
           + LG G FG V KA  F   G    +  AVK  K   S     + L+E +++  + H ++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ--------------------DSENGVLLS 446
           ++L G C++ G LLL+ EY   GSL   L +                    D  +   L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT---- 502
               ++    ++  + YL    E  ++HRD+ A NI++      ++ S F L+       
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKI-SDFGLSRDVYEED 204
Query: 503 -----------MGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVN 550
                      + ++A E L     T ++DV+S+GV++ E V  G  P        ++ N
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP-GIPPERLFN 263
Query: 551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           L+         G  +E  D         +EM RL+   L C   +   RP    VF  ++
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYRLM---LQCWKQEPDKRP----VFADIS 303
Query: 611 NEAEPLVVPK 620
            + E ++V +
Sbjct: 304 KDLEKMMVKR 313

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 44/233 (18%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC 400
           +E++     F   +++GRGAFG V      ++  + A+K        K E L      AC
Sbjct: 83  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-----NKWEMLKRAET-AC 136
Query: 401 LRHKNLVQLLGWCA----------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWY 448
            R +  V + G C           ++  L LV +Y   G L  +L  ++D     +  +Y
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY 196
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------S 495
                +  +  A+  +HQ      +HRDIK  N++LD N + RL                
Sbjct: 197 -----IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ 248
Query: 496 FTLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
            ++  GT  Y++PE LQ      G    + D +S GV + E+  G  P   E+
Sbjct: 249 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 49/293 (16%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSK-------HSHEGKTE-FLAELSIIACLRHK 404
           N  LG+G F  ++K      G    +  ++        +H   +E F    S+++ L HK
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +LV   G C    E +LV E++  GSLD  L + ++N + + W  +L +   LA A+ +L
Sbjct: 73  HLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 465 HQECEQQVIHRDIKASNIML---------DANFNARLESSFTLTA-------GTMGYLAP 508
               E  +IH ++ A NI+L         +  F    +   ++T          + ++ P
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 509 EYLQYGTATE-KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA 567
           E ++        TD +S+G  + E+  G         G K ++ +D      ++ ++   
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFY 231
Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK 620
            D+    A    E+  L+    +C + +   RPS R + + LN+   P +VP+
Sbjct: 232 EDRHQLPAPKAAELANLI---NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 44/207 (21%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G++ AVK+ +HS  + + +F  E+ I+  L    +V+  
Sbjct: 18  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 411 G--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G  +   +  L LV EY+P+G L   L +           HR  +    +  L Y  Q C
Sbjct: 78  GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----------HRARLDA--SRLLLYSSQIC 124
Query: 469 E-------QQVIHRDIKASNIMLDANFNARLESSFTLT----------------AGTMGY 505
           +       ++ +HRD+ A NI++++  + ++ + F L                    + +
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKI-ADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
            APE L     + ++DV+S+GVV+ E+
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYEL 210

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 44/207 (21%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G++ AVK+ +HS  + + +F  E+ I+  L    +V+  
Sbjct: 19  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 411 G--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G  +   +  L LV EY+P+G L   L +           HR  +    +  L Y  Q C
Sbjct: 79  GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----------HRARLDA--SRLLLYSSQIC 125
Query: 469 E-------QQVIHRDIKASNIMLDANFNARLESSFTLT----------------AGTMGY 505
           +       ++ +HRD+ A NI++++  + ++ + F L                    + +
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKI-ADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
            APE L     + ++DV+S+GVV+ E+
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYEL 211

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIA-CLRHKNLVQLLG 411
           ++ LG G+F    K     S    AVK      E  T+   E++ +  C  H N+V+L  
Sbjct: 16  DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHE 73
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              ++    LV E +  G L   + +        + Y    I+  L SA++++H   +  
Sbjct: 74  VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY----IMRKLVSAVSHMH---DVG 126
Query: 472 VIHRDIKASNIML-DANFN----------ARLE----SSFTLTAGTMGYLAPEYLQYGTA 516
           V+HRD+K  N++  D N N          ARL+            T+ Y APE L     
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 517 TEKTDVFSYGVVVLEVACGRRPIERE---------TEGHKMVNLVDWVWGLYAEGRIIEA 567
            E  D++S GV++  +  G+ P +            E  K +   D+ +   A   + + 
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246
Query: 568 ADKRLNGAFNEDEMKRLLLVGL 589
           A   + G    D  KRL + GL
Sbjct: 247 AKDLIQGLLTVDPNKRLKMSGL 268

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 340 YRELRSATRGFHSNRILGRG-----AFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLA 393
           YR +R+  +G  +  IL        A     K+              K S + K  +F  
Sbjct: 33  YRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKN 92
Query: 394 ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL---DRMLYQDSENGVLLSWYHR 450
           EL II  ++++  +   G      E+ ++YEYM N S+   D   +   +N         
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 451 LN-IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----ESSFTL------T 499
           +  I+  + ++ +Y+H E  + + HRD+K SNI++D N   +L    ES + +      +
Sbjct: 153 IKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS 210
Query: 500 AGTMGYLAPEYLQYGTATE--KTDVFSYGVVV 529
            GT  ++ PE+    ++    K D++S G+ +
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 334 GPREFSYRELRSATRGFHSNRI--LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK--- 388
           GP   S     SAT      RI  LG G +G VYKA    +    A+KR +  HE +   
Sbjct: 18  GPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVP 77
Query: 389 TEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
              + E+S++  L+H+N+++L         L L++EY  N   D   Y D    V +   
Sbjct: 78  GTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVI 134
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLE------------ 493
              + +  L + + + H    ++ +HRD+K  N++L   DA+    L+            
Sbjct: 135 K--SFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
Query: 494 --SSFTLTAGTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEV 532
               FT    T+ Y  PE L     Y T+    D++S   +  E+
Sbjct: 190 PIRQFTHEIITLWYRPPEILLGSRHYSTS---VDIWSIACIWAEM 231

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 121/291 (41%), Gaps = 55/291 (18%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV----------LLSWYHRLNIVVG 456
            LLG C + G  L+++ E+   G+L   L       V           L+  H +     
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT-------------- 502
           +A  + +L     ++ IHRD+ A NI+L      ++   F L                  
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKI-CDFGLARDIXKDPDXVRKGDARL 212
Query: 503 -MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYA 560
            + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +       
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRRLK 265
Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 266 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307

>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY+     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYTGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 4   DTIVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 58
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 59  VAKRLSAVVSYSGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 60/229 (26%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F    ++G G FG V+KA     G    ++R K+++E K E   E+  +A L H N+V  
Sbjct: 14  FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-KAE--REVKALAKLDHVNIVHY 70
Query: 410 LG-WCAEKGELLLVYEYMPNGSLDRMLYQD-----------------------SENGVLL 445
            G W          ++Y P  S D +   D                        + G L 
Sbjct: 71  NGCWDG--------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 446 SWYHR-----------LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-- 492
            W  +           L +   +   + Y+H    +++IHRD+K SNI L      ++  
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 493 ---------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
                    +   T + GT+ Y++PE +      ++ D+++ G+++ E+
Sbjct: 180 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY+     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYTGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYSGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP   HIG+DI S+ S  TA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTAR-----WNMQTGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY+     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYTGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 4   DTIVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 58
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 59  VAKRLSAVVSYSGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 56/292 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 36  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRML---------YQDSEN--GVLLSWYHRLNIVV 455
            LLG C + G  L+++ E+   G+L   L         Y+  E+     L+  H +    
Sbjct: 96  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------------- 502
            +A  + +L     ++ IHRD+ A NI+L      ++   F L                 
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIXKDPDXVRKGDAR 211
Query: 503 --MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLY 559
             + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +      
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRRL 264
Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 265 KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 44/207 (21%)
Query: 356 LGRGAFGNV----YKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G FG+V    Y     ++G++ AVK+ +HS  + + +F  E+ I+  L    +V+  
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 411 G--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G  +   +  L LV EY+P+G L   L +           HR  +    +  L Y  Q C
Sbjct: 91  GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----------HRARLDA--SRLLLYSSQIC 137
Query: 469 E-------QQVIHRDIKASNIMLDANFNARLESSFTLT----------------AGTMGY 505
           +       ++ +HRD+ A NI++++  + ++ + F L                    + +
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKI-ADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEV 532
            APE L     + ++DV+S+GVV+ E+
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYEL 223

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 45/228 (19%)
Query: 346 ATRGFHSN----RILGRGAFGNVYKAYFASSGSVAAVK----------RSKHSHEGKTEF 391
           +T GF+ N     ILGRG    V +     +    AVK           ++   E +   
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 392 LAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
           L E+ I+  +  H N++QL           LV++ M  G L   L +     V LS    
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKET 126
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTLT 499
             I+  L   +  LH+     ++HRD+K  NI+LD + N +L                  
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 500 AGTMGYLAPEYLQ---------YGTATEKTDVFSYGVVVLEVACGRRP 538
            GT  YLAPE ++         YG   ++ D++S GV++  +  G  P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYG---KEVDMWSTGVIMYTLLAGSPP 228

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 61/295 (20%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRML---------YQDSENGV---LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L         Y+++   +    L+  H +   
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
             +A  + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKG 210
Query: 515 TA-----------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVW 556
            A                 T ++DV+S+GV++ E+ + G  P       +  V + +   
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFC 263
Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 264 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 309

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 45/228 (19%)
Query: 346 ATRGFHSN----RILGRGAFGNVYKAYFASSGSVAAVK----------RSKHSHEGKTEF 391
           +T GF+ N     ILGRG    V +     +    AVK           ++   E +   
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 392 LAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
           L E+ I+  +  H N++QL           LV++ M  G L   L +     V LS    
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKET 126
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTLT 499
             I+  L   +  LH+     ++HRD+K  NI+LD + N +L                  
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 500 AGTMGYLAPEYLQ---------YGTATEKTDVFSYGVVVLEVACGRRP 538
            GT  YLAPE ++         YG   ++ D++S GV++  +  G  P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYG---KEVDMWSTGVIMYTLLAGSPP 228

>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYSGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 36/298 (12%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-----RHKNLVQ 408
           R++GRG++  V       +  + A+K  K       E +  +     +      H  LV 
Sbjct: 15  RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V EY+  G L  M +   +    L   H       ++ AL YLH   
Sbjct: 75  LHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYLH--- 127
Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LD+  + +L              + +   GT  Y+APE L+    
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 517 TEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRI-------IEAA 568
               D ++ GV++ E+  GR P +   +  +   N  D+++ +  E +I       ++AA
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 247
Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
              L    N+D  +R L         D    P  R V   +  + +  VVP  KP ++
Sbjct: 248 -SVLKSFLNKDPKER-LGCHPQTGFADIQGHPFFRNVDWDMMEQKQ--VVPPFKPNIS 301

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 51/230 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G+G FG V+KA    +G   A+K+    +E +      L E+ I+  L+H+N+V L+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 413 CAE--------KGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           C          KG + LV+++  +   G L  +L +       LS   R  ++  L + L
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIKR--VMQMLLNGL 138
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTAG-----------TM 503
            Y+H+    +++HRD+KA+N+++        A+F   L  +F+L              T+
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNSQPNRYXNRVVTL 193
Query: 504 GYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV 549
            Y  PE L     YG      D++  G ++ E+      ++  TE H++ 
Sbjct: 194 WYRPPELLLGERDYGPP---IDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLA-ELSIIACLRHKNLVQ 408
           ++G+G F  V +     +G   AVK     +   S    TE L  E SI   L+H ++V+
Sbjct: 31  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           LL   +  G L +V+E+M    L   + + ++ G + S     + +  +  AL Y H   
Sbjct: 91  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 147
Query: 469 EQQVIHRDIKASNIMLDANFNA------------RLESSFTLTAGTMG---YLAPEYLQY 513
           +  +IHRD+K   ++L +  N+            +L  S  +  G +G   ++APE ++ 
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI----ERETEG 545
               +  DV+  GV++  +  G  P     ER  EG
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 243

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEGKTEFLA-ELSIIACLRHKNLVQ 408
           ++G+G F  V +     +G   AVK     +   S    TE L  E SI   L+H ++V+
Sbjct: 33  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           LL   +  G L +V+E+M    L   + + ++ G + S     + +  +  AL Y H   
Sbjct: 93  LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 149
Query: 469 EQQVIHRDIKASNIMLDANFNA------------RLESSFTLTAGTMG---YLAPEYLQY 513
           +  +IHRD+K   ++L +  N+            +L  S  +  G +G   ++APE ++ 
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 209
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI----ERETEG 545
               +  DV+  GV++  +  G  P     ER  EG
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 245

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 36/298 (12%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-----RHKNLVQ 408
           R++GRG++  V       +  + A+K  K       E +  +     +      H  LV 
Sbjct: 26  RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V EY+  G L  M +   +    L   H       ++ AL YLH   
Sbjct: 86  LHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYLH--- 138
Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LD+  + +L              + +   GT  Y+APE L+    
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 517 TEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRI-------IEAA 568
               D ++ GV++ E+  GR P +   +  +   N  D+++ +  E +I       ++AA
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAA 258
Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
              L    N+D  +RL  +       D    P  R V   +  + +  VVP  KP ++
Sbjct: 259 -SVLKSFLNKDPKERLGCLP-QTGFADIQGHPFFRNVDWDMMEQKQ--VVPPFKPNIS 312

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 61/295 (20%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
             +A  + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKG 208
Query: 515 TA-----------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVW 556
            A                 T ++DV+S+GV++ E+ + G  P       +  V + +   
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFC 261
Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 262 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 51/229 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G+G FG V+KA    +G   A+K+    +E +      L E+ I+  L+H+N+V L+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 413 CAE--------KGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           C          KG + LV+++  +   G L  +L + +     LS   R  ++  L + L
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKR--VMQMLLNGL 138
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTAG-----------TM 503
            Y+H+    +++HRD+KA+N+++        A+F   L  +F+L              T+
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNSQPNRYXNRVVTL 193
Query: 504 GYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
            Y  PE L     YG      D++  G ++ E+      ++  TE H++
Sbjct: 194 WYRPPELLLGERDYGPP---IDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239

>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG++I S+ S  T        D+++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYQHIGINIKSIRSKATTR-----WDVQNGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY      T  +  ++DL+  L   + VG SAST    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 51/229 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G+G FG V+KA    +G   A+K+    +E +      L E+ I+  L+H+N+V L+  
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 413 CAE--------KGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           C          KG + LV+++  +   G L  +L + +     LS   R  ++  L + L
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKR--VMQMLLNGL 137
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTAG-----------TM 503
            Y+H+    +++HRD+KA+N+++        A+F   L  +F+L              T+
Sbjct: 138 YYIHR---NKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNSQPNRYXNRVVTL 192
Query: 504 GYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
            Y  PE L     YG      D++  G ++ E+      ++  TE H++
Sbjct: 193 WYRPPELLLGERDYGPP---IDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 61/295 (20%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
             +A  + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKG 245
Query: 515 TA-----------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVW 556
            A                 T ++DV+S+GV++ E+ + G  P       +  V + +   
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFC 298
Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 299 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 344

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 36/298 (12%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-----RHKNLVQ 408
           R++GRG++  V       +  + A+K  K       E +  +     +      H  LV 
Sbjct: 11  RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V EY+  G L  M +   +    L   H       ++ AL YLH   
Sbjct: 71  LHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYLH--- 123
Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LD+  + +L              + +   GT  Y+APE L+    
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 517 TEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRI-------IEAA 568
               D ++ GV++ E+  GR P +   +  +   N  D+++ +  E +I       ++AA
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 243
Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
              L    N+D  +R L         D    P  R V   +  + +  VVP  KP ++
Sbjct: 244 -SVLKSFLNKDPKER-LGCHPQTGFADIQGHPFFRNVDWDMMEQKQ--VVPPFKPNIS 297

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 57/293 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------------ 502
             +A  + +L     ++ IHRD+ A NI+L      ++   F L                
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIXKDPDXVRKGDA 210
Query: 503 ---MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGL 558
              + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +     
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRR 263
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 264 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F    ++G G FG V+KA     G    +KR K+++E K E   E+  +A L H N+V  
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAE--REVKALAKLDHVNIVHY 69
Query: 410 LG-W---------------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
            G W                ++   L +  E+   G+L++ +  +   G  L     L +
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALEL 127
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT 502
              +   + Y+H    +++I+RD+K SNI L      ++           +     + GT
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGT 184
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
           + Y++PE +      ++ D+++ G+++ E+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 57/293 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------------ 502
             +A  + +L     ++ IHRD+ A NI+L      ++   F L                
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIYKDPDXVRKGDA 210
Query: 503 ---MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGL 558
              + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +     
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRR 263
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 264 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307

>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E D+  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 2   DTIVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY+     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYTGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 83
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 84  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 136
Query: 471 QVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++             E   TL  GT  Y+APE L     +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHS 195
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR----------HK 404
           ++GRG    V +    ++G   AVK  + + E  +    E    A  R          H 
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++ L+        + LV++ M  G L   L +     V LS     +I+  L  A+++L
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFL 216
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------------AGTMGYLAPEYLQ 512
           H      ++HRD+K  NI+LD N   RL S F  +             GT GYLAPE L+
Sbjct: 217 HA---NNIVHRDLKPENILLDDNMQIRL-SDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 513 ---------YGTATEKTDVFSYGVVVLEVACGRRP 538
                    YG   ++ D+++ GV++  +  G  P
Sbjct: 273 CSMDETHPGYG---KEVDLWACGVILFTLLAGSPP 304

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 44/233 (18%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC 400
           +++R     F   +++GRGAFG V      ++  V A+K        K E L      AC
Sbjct: 67  KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKIL-----NKWEMLKRAET-AC 120
Query: 401 LRHKNLVQLLG---WCA-------EKGELLLVYEYMPNGSLDRML--YQDSENGVLLSWY 448
            R +  V + G   W         +   L LV +Y   G L  +L  ++D     +  +Y
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY 180
Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES-------------S 495
                +  +  A+  +HQ      +HRDIK  NI++D N + RL                
Sbjct: 181 -----LAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232
Query: 496 FTLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
            ++  GT  Y++PE LQ      G    + D +S GV + E+  G  P   E+
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +     +G   A K     K S     +   E  I   L+H N+V+L   
Sbjct: 30  LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   L+++ +  G L    ++D       S     + +  +  A+ + HQ     V
Sbjct: 90  ISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGV 142
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HRD+K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + H++   +
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQI 236

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 83
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 84  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 136
Query: 471 QVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++             E   TL  GT  Y+APE L     +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHS 195
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 12  QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              E     L  EY   G L DR+     E  + +           L + + YLH     
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLHG---I 123
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT---------------AGTMGYLAPEYLQYGT 515
            + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE L+   
Sbjct: 124 GITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 516 -ATEKTDVFSYGVVVLEVACGRRPIERETE 544
              E  DV+S G+V+  +  G  P ++ ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 88  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 140
Query: 471 QVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++             E   TL  GT  Y+APE L     +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHS 199
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFE 222

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 76  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 127
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 76  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 127
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 61/295 (20%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
             +A  + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKG 199
Query: 515 TA-----------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVW 556
            A                 T ++DV+S+GV++ E+ + G  P       +  V + +   
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFC 252
Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 57/293 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 86  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------------ 502
             +A  + +L     ++ IHRD+ A NI+L      ++   F L                
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIXKDPDXVRKGDA 201
Query: 503 ---MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGL 558
              + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +     
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRR 254
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 255 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 44  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 104 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 155
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 156 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 213 NFRRFTSASDVWMFGVCMWEI 233

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 61/295 (20%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYG 514
             +A  + +L     ++ IHRD+ A NI+L      ++   F L      Y  P+Y++ G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDI--YKDPDYVRKG 199
Query: 515 TA-----------------TEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVW 556
            A                 T ++DV+S+GV++ E+ + G  P       +  V + +   
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFC 252
Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +G+GAF  V +     +G   A K     K S     +   E  I   L+H N+V+L   
Sbjct: 12  IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   LV++ +  G L    ++D       S     + +  +  A+ + HQ     V
Sbjct: 72  ISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGV 124
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HRD+K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + HK+   +
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQI 218

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 19  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 79  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 130
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 131 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 188 NFRRFTSASDVWMFGVCMWEI 208

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K     +G   A K     R   S  G  + E   E++I+  +RH N++ 
Sbjct: 20  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  +   + YLH   
Sbjct: 80  LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 133
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML D N  N R++             + F    GT  ++APE + Y
Sbjct: 134 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   ET+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 230

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +    +     A K     K S     +   E  I   L+H N+V+L   
Sbjct: 39  LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   LV++ +  G L    ++D       S     + +  +  ++ ++HQ     +
Sbjct: 99  ISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESVNHIHQ---HDI 151
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HRD+K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + HK+   +
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQI 245

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 57/293 (19%)
Query: 356 LGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLV 407
           LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 408 QLLGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLNIV 454
            LLG C + G  L+++ E+   G+L   L       V             L+  H +   
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGT------------ 502
             +A  + +L     ++ IHRD+ A NI+L      ++   F L                
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIXKDPDXVRKGDA 201
Query: 503 ---MGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGL 558
              + ++APE +     T ++DV+S+GV++ E+ + G  P       +  V + +     
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-------YPGVKIDEEFCRR 254
Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 255 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 13  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 73  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 124
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 125 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 182 NFRRFTSASDVWMFGVCMWEI 202

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K     +G   A K     R   S  G  + E   E++I+  +RH N++ 
Sbjct: 13  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  +   + YLH   
Sbjct: 73  LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 126
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML D N  N R++             + F    GT  ++APE + Y
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   ET+   + N+
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 223

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K     +G   A K     R   S  G  + E   E++I+  +RH N++ 
Sbjct: 34  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  +   + YLH   
Sbjct: 94  LHDIFENKTDVVLILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS-- 147
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML D N  N R++             + F    GT  ++APE + Y
Sbjct: 148 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   ET+   + N+
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 244

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 81  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 132
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 133 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 190 NFRRFTSASDVWMFGVCMWEI 210

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEF-LAELSIIACLRHKNLVQLL 410
           +LG+G+FG V  +    +  + AVK  K      +   E  + E  ++A       +  L
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 411 GWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             C +  + L  V EY+  G L   +Y   + G      H +     +A  L +L     
Sbjct: 87  HSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQS--- 139
Query: 470 QQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTA 516
           + +I+RD+K  N+MLD+  + ++ + F +               GT  Y+APE + Y   
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKI-ADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETE 544
            +  D +++GV++ E+  G+ P E E E
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDE 226

>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP+  HIG++I S+ S  T        +++ G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTR-----WNVQDGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY      T  +  ++DL+  L   + VG SAST    E + I SWSF +
Sbjct: 57  VAKRLSAIVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSASTGVYKETNTILSWSFTS 113

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 18  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    Y      ++L  Y        L++AL YL
Sbjct: 78  LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ-------LSTALAYL 129
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ +N   +L            + +  + G +   ++APE +
Sbjct: 130 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 187 NFRRFTSASDVWMFGVCMWEI 207

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 44/224 (19%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R+  R       +G+G +G V++  +   G   AVK      E       EL     LRH
Sbjct: 4   RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 404 KNLVQLLGWCAE-------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           +N+   LG+ A          +L L+  Y   GSL   L   + + V       L IV+ 
Sbjct: 62  ENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLS 113
Query: 457 LASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNA----------------RLESS 495
           +AS L +LH E      +  + HRD+K+ NI++  N                   +L+  
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 496 FTLTAGTMGYLAPEYLQYGTATE------KTDVFSYGVVVLEVA 533
                GT  Y+APE L      +      + D++++G+V+ EVA
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E ++  +    DP+  HIG+DI S+ S  TA       ++++G V T  I Y +
Sbjct: 2   DTIVAVELNSYPNTDIGDPNYPHIGIDIKSIRSKSTAR-----WNMQTGKVGTVHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SYS     T  +  ++DL+  L   + VG SA+T    E + I SWSF +
Sbjct: 57  VAKRLSAVVSYSGSSSTT--VSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + +G G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EYMP G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 76/306 (24%)
Query: 354 RILGRGAFGNVYKAYF--------ASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A          A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHM 87
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------LSWYHR 450
           N+V LLG C   G  L++ EY   G L   L +  ++ +               L     
Sbjct: 88  NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML-------------------DANF--- 488
           L+    +A  + +L     +  IHRD+ A NI+L                   D+N+   
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 489 -NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGH 546
            NARL          + ++APE +     T ++DV+SYG+ + E+ + G  P        
Sbjct: 205 GNARLP---------VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           K               ++I+   + L+      EM  ++    +C + D   RP+ +++ 
Sbjct: 256 KFY-------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIV 299
Query: 607 QILNNE 612
           Q++  +
Sbjct: 300 QLIEKQ 305

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 45/225 (20%)
Query: 349 GFHSN----RILGRGAFGNVYKAYFASSGSVAAVK----------RSKHSHEGKTEFLAE 394
           GF+ N     ILGRG    V +     +    AVK           ++   E +   L E
Sbjct: 1   GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 395 LSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
           + I+  +  H N++QL           LV++ M  G L   L +     V LS      I
Sbjct: 61  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKI 116
Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----------SSFTLTAGT 502
           +  L   +  LH+     ++HRD+K  NI+LD + N +L                   GT
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 173
Query: 503 MGYLAPEYLQ---------YGTATEKTDVFSYGVVVLEVACGRRP 538
             YLAPE ++         YG   ++ D++S GV++  +  G  P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYG---KEVDMWSTGVIMYTLLAGSPP 215

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    +      ++L  Y        L++AL YL
Sbjct: 76  LIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ-------LSTALAYL 127
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL---------ESSFTLTAGT----MGYLAPEYL 511
                ++ +HRDI A N+++ +N   +L         E S    A      + ++APE +
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + +G G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EYMP G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 78  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 131
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 78  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 131
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEF-LAELSIIACLRHKNLVQLL 410
           +LG+G+FG V  +    +  + AVK  K      +   E  + E  ++A       +  L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 411 GWCAEK-GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             C +    L  V EY+  G L   +Y   + G      H +     +A  L +L     
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQS--- 460
Query: 470 QQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTA 516
           + +I+RD+K  N+MLD+  + ++ + F +               GT  Y+APE + Y   
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKI-ADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETE 544
            +  D +++GV++ E+  G+ P E E E
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDE 547

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 76/306 (24%)
Query: 354 RILGRGAFGNVYKAYF--------ASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A          A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 52  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHM 110
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------LSWYHR 450
           N+V LLG C   G  L++ EY   G L   L +  ++ +               L     
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML-------------------DANF--- 488
           L+    +A  + +L     +  IHRD+ A NI+L                   D+N+   
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 489 -NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGH 546
            NARL          + ++APE +     T ++DV+SYG+ + E+ + G  P        
Sbjct: 228 GNARLP---------VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           K               ++I+   + L+      EM  ++    +C + D   RP+ +++ 
Sbjct: 279 KFY-------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIV 322
Query: 607 QILNNE 612
           Q++  +
Sbjct: 323 QLIEKQ 328

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 39/221 (17%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           LGRG FG V++    SS      K  K     +     E+SI+   RH+N++ L      
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN---IVVGLASALTYLHQECE--- 469
             EL++++E++                  L  + R+N     +     ++Y+HQ CE   
Sbjct: 73  MEELVMIFEFISG----------------LDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 470 ----QQVIHRDIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQ 512
                 + H DI+  NI+     ++ ++              +F L      Y APE  Q
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           +   +  TD++S G +V  +  G  P   ET    + N+++
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN 217

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 107
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 160
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++   F L               GT  Y+APE L     +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFE 242

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 76/306 (24%)
Query: 354 RILGRGAFGNVYKAYF--------ASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A          A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 45  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHM 103
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------LSWYHR 450
           N+V LLG C   G  L++ EY   G L   L +  ++ +               L     
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML-------------------DANF--- 488
           L+    +A  + +L     +  IHRD+ A NI+L                   D+N+   
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 489 -NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGH 546
            NARL          + ++APE +     T ++DV+SYG+ + E+ + G  P        
Sbjct: 221 GNARL---------PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           K               ++I+   + L+      EM  ++    +C + D   RP+ +++ 
Sbjct: 272 KFY-------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIV 315
Query: 607 QILNNE 612
           Q++  +
Sbjct: 316 QLIEKQ 321

>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP+  HIG++I S+ S  T        +++ G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTR-----WNVQDGKVGTAHISYNS 56
Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
             + L   +SY      T  +  ++DL+  L   + VG SAST    E + I SWSF +
Sbjct: 57  VAKRLSAIVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTS 113

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 44/224 (19%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R+  R       +G+G +G V++  +   G   AVK      E       EL     LRH
Sbjct: 33  RTVARQITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRH 90
Query: 404 KNLVQLLGWCAE-------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           +N+   LG+ A          +L L+  Y   GSL   L   + + V       L IV+ 
Sbjct: 91  ENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLS 142
Query: 457 LASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNA----------------RLESS 495
           +AS L +LH E      +  + HRD+K+ NI++  N                   +L+  
Sbjct: 143 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 202
Query: 496 FTLTAGTMGYLAPEYLQYGTATE------KTDVFSYGVVVLEVA 533
                GT  Y+APE L      +      + D++++G+V+ EVA
Sbjct: 203 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 105
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 158
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++   F L               GT  Y+APE L     +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFE 240

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 76/306 (24%)
Query: 354 RILGRGAFGNVYKAYF--------ASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A          A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 52  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHM 110
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------LSWYHR 450
           N+V LLG C   G  L++ EY   G L   L +  ++ +               L     
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML-------------------DANF--- 488
           L+    +A  + +L     +  IHRD+ A NI+L                   D+N+   
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 489 -NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGH 546
            NARL          + ++APE +     T ++DV+SYG+ + E+ + G  P        
Sbjct: 228 GNARLP---------VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           K               ++I+   + L+      EM  ++    +C + D   RP+ +++ 
Sbjct: 279 KFY-------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIV 322
Query: 607 QILNNE 612
           Q++  +
Sbjct: 323 QLIEKQ 328

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 36  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 151
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +GRG++G V  A    +    A K+  K+  E    F  E+ I+  L H N+++L     
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 415 EKGELLLVYEYMPNGSL-----DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +  ++ LV E    G L      + ++++S+            I+  + SA+ Y H+   
Sbjct: 77  DNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCHK--- 124
Query: 470 QQVIHRDIKASNIM------------LDANFNARLESSFTL--TAGTMGYLAPEYLQYGT 515
             V HRD+K  N +            +D    AR +    +    GT  Y++P+ L+ G 
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE-GL 183
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
              + D +S GV++  + CG  P    T+   M+ +
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 219

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 76/306 (24%)
Query: 354 RILGRGAFGNVYKAYF--------ASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHK 404
           + LG GAFG V +A          A + +V  +K S H  E +   ++EL +++ L  H 
Sbjct: 47  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-REALMSELKVLSYLGNHM 105
Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL--------------LSWYHR 450
           N+V LLG C   G  L++ EY   G L   L +  ++ +               L     
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIML-------------------DANF--- 488
           L+    +A  + +L     +  IHRD+ A NI+L                   D+N+   
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 489 -NARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGH 546
            NARL          + ++APE +     T ++DV+SYG+ + E+ + G  P        
Sbjct: 223 GNARL---------PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           K               ++I+   + L+      EM  ++    +C + D   RP+ +++ 
Sbjct: 274 KFY-------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIV 317
Query: 607 QILNNE 612
           Q++  +
Sbjct: 318 QLIEKQ 323

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +GRG++G V  A    +    A K+  K+  E    F  E+ I+  L H N+++L     
Sbjct: 34  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 415 EKGELLLVYEYMPNGSL-----DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +  ++ LV E    G L      + ++++S+            I+  + SA+ Y H+   
Sbjct: 94  DNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCHK--- 141
Query: 470 QQVIHRDIKASNIM------------LDANFNARLESSFTL--TAGTMGYLAPEYLQYGT 515
             V HRD+K  N +            +D    AR +    +    GT  Y++P+ L+ G 
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE-GL 200
Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
              + D +S GV++  + CG  P    T+   M+ +
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 236

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 51/229 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK---TEFLAELSIIACLRHKNLVQLLGW 412
           +G+G FG V+KA    +G   A+K+    +E +      L E+ I+  L+H+N+V L+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 413 CAE--------KGELLLVYEYMPN---GSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           C          K  + LV+++  +   G L  +L + +     LS   R  ++  L + L
Sbjct: 86  CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKR--VMQMLLNGL 138
Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFNARLESSFTLTAG-----------TM 503
            Y+H+    +++HRD+KA+N+++        A+F   L  +F+L              T+
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNSQPNRYXNRVVTL 193
Query: 504 GYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
            Y  PE L     YG      D++  G ++ E+      ++  TE H++
Sbjct: 194 WYRPPELLLGERDYGPP---IDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 36/298 (12%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-----RHKNLVQ 408
           R++GRG++  V       +  + A++  K       E +  +     +      H  LV 
Sbjct: 58  RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      +  L  V EY+  G L  M +   +    L   H       ++ AL YLH   
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK--LPEEHARFYSAEISLALNYLH--- 170
Query: 469 EQQVIHRDIKASNIMLDANFNARLES------------SFTLTAGTMGYLAPEYLQYGTA 516
           E+ +I+RD+K  N++LD+  + +L              + +   GT  Y+APE L+    
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 517 TEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWGLYAEGRI-------IEAA 568
               D ++ GV++ E+  GR P +   +  +   N  D+++ +  E +I       ++AA
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 290
Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
              L    N+D  +R L         D    P  R V   +  + +  VVP  KP ++
Sbjct: 291 -SVLKSFLNKDPKER-LGCHPQTGFADIQGHPFFRNVDWDMMEQKQ--VVPPFKPNIS 344

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 29  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 89  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 144
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPF 224

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 36  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 151
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     R+K S  G  + +   E+SI+  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      K +++L+ E +  G L   L +       L+       +  + + + YLH   
Sbjct: 79  LHEVYENKTDVILIGELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS-- 132
Query: 469 EQQVIHRDIKASNIML-DANF-NARLE-------------SSFTLTAGTMGYLAPEYLQY 513
             Q+ H D+K  NIML D N    R++             + F    GT  ++APE + Y
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
                + D++S GV+   +  G  P   +T+   + N+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 64  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 179
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHE 386
           +P  R++  +  R         R +G G FG+V++  + S  + A   A+K  K+  S  
Sbjct: 379 MPSTRDYEIQRER-----IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD-----RMLYQDSEN 441
            + +FL E   +    H ++V+L+G   E   + ++ E    G L      R    D  +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------- 492
            +L ++         L++AL YL     ++ +HRDI A N+++ +N   +L         
Sbjct: 493 LILYAY--------QLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 493 --ESSFTLTAGTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
              + +  + G +   ++APE + +   T  +DV+ +GV + E+
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           LG+G F   ++   A +  V A K    S     H+ + +   E+SI   L H+++V   
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 81
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+  +   + +V E     SL  +  +        + Y+   IV+G      YLH+    
Sbjct: 82  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHR---N 134
Query: 471 QVIHRDIKASNIMLDANFNARLESSFTLT-------------AGTMGYLAPEYLQYGTAT 517
           +VIHRD+K  N+ L+ +   ++   F L               GT  Y+APE L     +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKI-GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            + DV+S G ++  +  G+ P E
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE 216

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 44/212 (20%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G +G V++  +   G   AVK      E       EL     LRH+N+   LG+ A 
Sbjct: 16  VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIAS 70
Query: 416 -------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                    +L L+  Y   GSL   L   + + V       L IV+ +AS L +LH E 
Sbjct: 71  DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 469 -----EQQVIHRDIKASNIMLDANFNA----------------RLESSFTLTAGTMGYLA 507
                +  + HRD+K+ NI++  N                   +L+       GT  Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 508 PEYLQYGTATE------KTDVFSYGVVVLEVA 533
           PE L      +      + D++++G+V+ EVA
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK-----RSKHSHEG--KTEFLAELSIIACLRHKNLVQ 408
           LG G F  V K    S+G   A K     +S+ S  G  + E   E+SI+  + H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L      + +++L+ E +  G L   L Q       LS     + +  +   + YLH   
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT-- 133
Query: 469 EQQVIHRDIKASNIML-------------DANFNARLES--SFTLTAGTMGYLAPEYLQY 513
            +++ H D+K  NIML             D      +E    F    GT  ++APE + Y
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
                + D++S GV+   +  G  P   +T+   + N+ 
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +     +G   A K     K S     +   E  I   L+H N+V+L   
Sbjct: 12  LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   LV++ +  G L        E+ V   +Y   +    +   L  ++      +
Sbjct: 72  ISEEGFHYLVFDLVTGGEL-------FEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HRD+K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + H++   +
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQI 218

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +     +G   A K     K S     +   E  I   L+H N+V+L   
Sbjct: 12  LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   LV++ +  G L        E+ V   +Y   +    +   L  ++      +
Sbjct: 72  ISEEGFHYLVFDLVTGGEL-------FEDIVAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HRD+K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + H++   +
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQI 218

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
            + + +++G G+FG V++A    S  V A+K+       K     EL I+  ++H N+V 
Sbjct: 41  AYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNR---ELQIMRIVKHPNVVD 96
Query: 409 LLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV----VGLA 458
           L  +    G+      L LV EY+P       +Y+ S +   L     + ++      L 
Sbjct: 97  LKAFFYSNGDKKDEVFLNLVLEYVPE-----TVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNA----RLESSFTLTAG--------TMGYL 506
            +L Y+H      + HRDIK  N++LD            S+  L AG        +  Y 
Sbjct: 152 RSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 507 APEYLQYGTA--TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           APE L +G    T   D++S G V+ E+  G+     E+   ++V ++
Sbjct: 209 APE-LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII 255

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 49/218 (22%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSI--IACLRHKNLVQLLGW 412
           ++GRG +G VYK           V     S   +  F+ E +I  +  + H N+ + +  
Sbjct: 20  LIGRGRYGAVYKGSLDERPVAVKV----FSFANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 413 CAE-----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
                   + E LLV EY PNGSL + L   + +     W     +   +   L YLH E
Sbjct: 76  DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHTE 130
Query: 468 CEQ------QVIHRDIKASNIML---------DANFNARL-----------ESSFTLTAG 501
             +       + HRD+ + N+++         D   + RL           +++     G
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 502 TMGYLAPEYLQYG-------TATEKTDVFSYGVVVLEV 532
           T+ Y+APE L+         +A ++ D+++ G++  E+
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML----YQDSENGVLLSWYHRLNIVVGLASALTYL 464
           L+G   E   + ++ E    G L   L    +      ++L  Y        L++AL YL
Sbjct: 76  LIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ-------LSTALAYL 127
Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTM--GYLAPEYL 511
                ++ +HRDI A N+++ A    +L            + +  + G +   ++APE +
Sbjct: 128 ES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
            +   T  +DV+ +GV + E+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEI 205

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L +L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L +L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 40/220 (18%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--GKTEFLAELSIIACLRHKNLV 407
           F   + LGRG FG V++A         A+KR +  +    + + + E+  +A L H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 408 QLLGWCAEKG--ELLL-----VYEYMPNGSLDRMLYQDSENG-VLLSWYHR---LNIVVG 456
           +      EK   E L      VY Y+      +   +D  NG   +    R   L+I + 
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLT---- 499
           +A A+ +LH    + ++HRD+K SNI    +   ++             E    LT    
Sbjct: 127 IAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 500 -------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
                   GT  Y++PE +   + + K D+FS G+++ E+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + +G G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   R LG G+FG V       +G+  A+K   + K     + E  L E  I   +    
Sbjct: 44  FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 332 VPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA---AVKRSKH--SHE 386
           +P  R++  +  R         R +G G FG+V++  + S  + A   A+K  K+  S  
Sbjct: 379 MPSTRDYEIQRER-----IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 387 GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLD-----RMLYQDSEN 441
            + +FL E   +    H ++V+L+G   E   + ++ E    G L      R    D  +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------- 492
            +L ++         L++AL YL     ++ +HRDI A N+++ A    +L         
Sbjct: 493 LILYAY--------QLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 493 --ESSFTLTAGTM--GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
              + +  + G +   ++APE + +   T  +DV+ +GV + E+
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L +L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++      AGT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 76/203 (37%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         S  + AVK  +   +       E+     LRH N+V+       
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EY   G     L++   N    S          L S ++Y H     QV HR
Sbjct: 87  PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S    T GT  Y+APE L       K  D
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVAD 199
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEE 222

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 356 LGRGAFGNVYKAYFASSGSVAA---VKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +     +G   A   +   K S     +   E  I   L+H N+V+L   
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +E+G   L+++ +  G L    ++D       S     + +  +  A+ + HQ     V
Sbjct: 79  ISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGV 131
Query: 473 IHRDIKASNIMLD----------ANFNARLE-----SSFTLTAGTMGYLAPEYLQYGTAT 517
           +HR++K  N++L           A+F   +E      ++   AGT GYL+PE L+     
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           +  D+++ GV++  +  G  P   E + H++   +
Sbjct: 192 KPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQI 225

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 76/203 (37%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         S  + AVK  +   +       E+     LRH N+V+       
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EY   G     L++   N    S          L S ++Y H     QV HR
Sbjct: 87  PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S    T GT  Y+APE L       K  D
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVAD 199
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEE 222

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 44/224 (19%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R+  R       +G+G FG V++  +   G   AVK      E      AE+     LRH
Sbjct: 38  RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRH 95
Query: 404 KNLVQLLGWCAEKG-------ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
           +N+   LG+ A          +L LV +Y  +GSL      D  N   ++    + + + 
Sbjct: 96  ENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL-----FDYLNRYTVTVEGMIKLALS 147
Query: 457 LASALTYLHQEC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT---- 499
            AS L +LH E      +  + HRD+K+ NI++  N          A    S T T    
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 500 ----AGTMGYLAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
                GT  Y+APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R+  R       +G+G +G V++  +   G   AVK      E       E+     LRH
Sbjct: 4   RTVARQVALVECVGKGRYGEVWRGLW--HGESVAVKIFSSRDEQSWFRETEIYNTVLLRH 61
Query: 404 KNLVQLLGWCAE-------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
            N+   LG+ A          +L L+  Y  +GSL   L + +     L  +  L + V 
Sbjct: 62  DNI---LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT-----LEPHLALRLAVS 113
Query: 457 LASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNA----------------RLESS 495
            A  L +LH E      +  + HRD K+ N+++ +N                    L+  
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
Query: 496 FTLTAGTMGYLAPEYLQYGTATE------KTDVFSYGVVVLEVACGRRPI 539
                GT  Y+APE L     T+       TD++++G+V+ E+A  RR I
Sbjct: 174 NNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTI 221

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 37/229 (16%)
Query: 334 GPREFSYRELRSAT-----RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---- 384
           GPR   YR+  + T     +     R +G GA+G+V  AY A      AVK+        
Sbjct: 9   GPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL 68
Query: 385 -HEGKTEFLAELSIIACLRHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQ 437
            H  +T    EL ++  L+H+N++ LL          +  E+ LV   M    L+ ++  
Sbjct: 69  IHARRT--YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKS 125
Query: 438 DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI---------MLDANF 488
            +     LS  H   +V  L   L Y+H      +IHRD+K SN+         +LD   
Sbjct: 126 QA-----LSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGL 177
Query: 489 NARLESSFTLTAGTMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGR 536
             + +   T    T  Y APE  L +    +  D++S G ++ E+  G+
Sbjct: 178 ARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLV 407
           F    +LG GA+G V  A    +G + A+K+ +   +       L E+ I+   +H+N++
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 408 QLLGWCAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
            +             E+ ++ E M    L R++     +  +LS  H    +     A+ 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLSDDHIQYFIYQTLRAVK 126
Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------------------ESSFTLTA 500
            LH      VIHRD+K SN+++++N + ++                      +S  T   
Sbjct: 127 VLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 501 GTMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            T  Y APE  L     +   DV+S G ++ E+   RRPI
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 76/203 (37%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         S  + AVK  +   +       E+     LRH N+V+       
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EY   G     L++   N    S          L S ++Y H     QV HR
Sbjct: 87  PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S    T GT  Y+APE L       K  D
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVAD 199
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEE 222

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D              R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY P G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+M+D              R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 76/203 (37%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         S  + AVK  +   +       E+     LRH N+V+       
Sbjct: 26  IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EY   G     L++   N    S          L S ++Y H     QV HR
Sbjct: 86  PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHA---MQVCHR 138
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S    T GT  Y+APE L       K  D
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVAD 198
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 199 VWSCGVTLYVMLVGAYPFEDPEE 221

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 64  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 179
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++ +     GT  YLAPE +     
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 45/233 (19%)
Query: 342 ELRSATRGFHSNRI----------LGRGAFGNVY---KAYFASSGSVAAVKRSKHS---H 385
           ELR+A    H+ ++          LG GA+G V+   K     +G + A+K  K +    
Sbjct: 38  ELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ 97
Query: 386 EGKT--EFLAELSIIACLRHKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENG 442
           + KT      E  ++  +R    +  L +  + + +L L+ +Y+  G L   L Q     
Sbjct: 98  KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-- 155
Query: 443 VLLSWYHRLNIVVG-LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-- 499
                 H + I VG +  AL +LH+     +I+RDIK  NI+LD+N +  L + F L+  
Sbjct: 156 ---FTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVL-TDFGLSKE 208
Query: 500 ------------AGTMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGRRP 538
                        GT+ Y+AP+ ++ G +   +  D +S GV++ E+  G  P
Sbjct: 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +    ++G   A K     K S     +   E  I   L+H N+V+L   
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E+    LV++ +  G L    ++D       S     + +  +  ++ Y H      +
Sbjct: 74  IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYCHS---NGI 126
Query: 473 IHRDIKASNIMLD----------ANFNARLE----SSFTLTAGTMGYLAPEYLQYGTATE 518
           +HR++K  N++L           A+F   +E     ++   AGT GYL+PE L+    ++
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKM 548
             D+++ GV++  +  G  P   E + H++
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQ-HRL 215

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R+  R       +G+G FG V++  +   G   AVK      E      AE+     LRH
Sbjct: 25  RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRH 82
Query: 404 KNLVQLLGWCAEKG-------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIV 454
           +N+   LG+ A          +L LV +Y  +GSL   L  Y  +  G++        + 
Sbjct: 83  ENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------KLA 132
Query: 455 VGLASALTYLHQEC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT-- 499
           +  AS L +LH E      +  + HRD+K+ NI++  N          A    S T T  
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
Query: 500 ------AGTMGYLAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
                  GT  Y+APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 356 LGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +    ++G   +   +   K S     +   E  I   L+H N+V+L   
Sbjct: 13  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E+    LV++ +  G L    ++D       S     + +  +  ++ Y H      +
Sbjct: 73  IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYCHS---NGI 125
Query: 473 IHRDIKASNIMLD----------ANFNARLE----SSFTLTAGTMGYLAPEYLQYGTATE 518
           +HR++K  N++L           A+F   +E     ++   AGT GYL+PE L+    ++
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKM 548
             D+++ GV++  +  G  P   E + H++
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQ-HRL 214

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSV--AAVKRSKHSHEGK--TEFLAELSIIACLRHKNLVQLLG 411
           LG G FG+V +  +         A+K  K   E     E + E  I+  L +  +V+L+G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C  +  L+LV E    G L + L    E   + +    L+ V   +  + YL    E+ 
Sbjct: 78  VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLE---EKN 130
Query: 472 VIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMG-----YLAPEYLQYGT 515
            +HRD+ A N++L     A++ S F L           TA + G     + APE + +  
Sbjct: 131 FVHRDLAARNVLLVNRHYAKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 516 ATEKTDVFSYGVVVLE-VACGRRPIER 541
            + ++DV+SYGV + E ++ G++P ++
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKK 216

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLV 407
           F    +LG GA+G V  A    +G + A+K+ +   +       L E+ I+   +H+N++
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 408 QLLGWCAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
            +             E+ ++ E M    L R++     +  +LS  H    +     A+ 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLSDDHIQYFIYQTLRAVK 126
Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------------------ESSFTLTA 500
            LH      VIHRD+K SN+++++N + ++                      +S  T   
Sbjct: 127 VLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 501 GTMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            T  Y APE  L     +   DV+S G ++ E+   RRPI
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 30  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 90  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 145
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 146 S---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPF 225

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 356 LGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +    ++G   +   +   K S     +   E  I   L+H N+V+L   
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E+    LV++ +  G L    ++D       S     + +  +  ++ Y H      +
Sbjct: 74  IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYCHS---NGI 126
Query: 473 IHRDIKASNIMLD----------ANFNARLE----SSFTLTAGTMGYLAPEYLQYGTATE 518
           +HR++K  N++L           A+F   +E     ++   AGT GYL+PE L+    ++
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKM 548
             D+++ GV++  +  G  P   E + H++
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQ-HRL 215

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 356 LGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           LG+GAF  V +    ++G   +   +   K S     +   E  I   L+H N+V+L   
Sbjct: 37  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             E+    LV++ +  G L    ++D       S     + +  +  ++ Y H      +
Sbjct: 97  IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYCHS---NGI 149
Query: 473 IHRDIKASNIMLD----------ANFNARLE----SSFTLTAGTMGYLAPEYLQYGTATE 518
           +HR++K  N++L           A+F   +E     ++   AGT GYL+PE L+    ++
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKM 548
             D+++ GV++  +  G  P   E + H++
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQ-HRL 238

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLV---QL 409
           +G GA+G V  A    +G   A+K+  ++ +  T     L EL I+   +H N++    +
Sbjct: 63  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           L      GE   VY  +    ++  L+Q   +   L+  H    +  L   L Y+H    
Sbjct: 123 LRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--- 177
Query: 470 QQVIHRDIKASNIMLDANFNARL--------------ESSFTLT--AGTMGYLAPE-YLQ 512
            QVIHRD+K SN++++ N   ++              E  + +T    T  Y APE  L 
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 513 YGTATEKTDVFSYGVVVLEVACGRR 537
               T+  D++S G +  E+   R+
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 406 LVQLLGWCAEKGELLLVYEYM-PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +++LL W       +L+ E M P   L   +   +E G L     R +    +  A+ + 
Sbjct: 75  VIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELAR-SFFWQVLEAVRHC 130
Query: 465 HQECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQY 513
           H  C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y
Sbjct: 131 HN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 514 GTATEKT-DVFSYGVVVLEVACGRRPIERETE 544
                ++  V+S G+++ ++ CG  P E + E
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 355 ILGRG--AFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++G+G      V  A +  +G    V+R      S+E  T    EL +     H N+V  
Sbjct: 16  VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                   EL +V  +M  GS   ++   + D  N + +++     I+ G+  AL Y+H 
Sbjct: 76  RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH 130
Query: 467 ECEQQVIHRDIKASNIMLDAN---FNARLESSFTL----------------TAGTMGYLA 507
                 +HR +KAS+I++  +   + + L S+ ++                +   + +L+
Sbjct: 131 ---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 187
Query: 508 PEYLQYGTA--TEKTDVFSYGVVVLEVACGRRPIE 540
           PE LQ        K+D++S G+   E+A G  P +
Sbjct: 188 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 222

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G FG V++  +   G   AVK      E      AE+     LRH+N+   LG+ A 
Sbjct: 11  IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 65
Query: 416 KG-------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                    +L LV +Y  +GSL   L  Y  +  G++        + +  AS L +LH 
Sbjct: 66  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------KLALSTASGLAHLHM 118
Query: 467 EC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGY 505
           E      +  + HRD+K+ NI++  N          A    S T T         GT  Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 506 LAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
           +APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G FG V++  +   G   AVK      E      AE+     LRH+N+   LG+ A 
Sbjct: 14  IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 68
Query: 416 KG-------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                    +L LV +Y  +GSL   L  Y  +  G++        + +  AS L +LH 
Sbjct: 69  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------KLALSTASGLAHLHM 121
Query: 467 EC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGY 505
           E      +  + HRD+K+ NI++  N          A    S T T         GT  Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 506 LAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
           +APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G FG V++  +   G   AVK      E      AE+     LRH+N+   LG+ A 
Sbjct: 12  IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 66
Query: 416 KG-------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                    +L LV +Y  +GSL   L  Y  +  G++        + +  AS L +LH 
Sbjct: 67  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------KLALSTASGLAHLHM 119
Query: 467 EC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGY 505
           E      +  + HRD+K+ NI++  N          A    S T T         GT  Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 506 LAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
           +APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G+G FG V++  +   G   AVK      E      AE+     LRH+N+   LG+ A 
Sbjct: 17  IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 71
Query: 416 KG-------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                    +L LV +Y  +GSL   L  Y  +  G++        + +  AS L +LH 
Sbjct: 72  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------KLALSTASGLAHLHM 124
Query: 467 EC-----EQQVIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGY 505
           E      +  + HRD+K+ NI++  N          A    S T T         GT  Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 506 LAPEYL------QYGTATEKTDVFSYGVVVLEVA 533
           +APE L      ++  + ++ D+++ G+V  E+A
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 37/229 (16%)
Query: 334 GPREFSYRELRSAT-----RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---- 384
           GPR   YR+  + T     +     R +G GA+G+V  AY A      AVK+        
Sbjct: 9   GPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL 68
Query: 385 -HEGKTEFLAELSIIACLRHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQ 437
            H  +T    EL ++  L+H+N++ LL          +  E+ LV   M    L+ ++  
Sbjct: 69  IHARRT--YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKC 125
Query: 438 DSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI---------MLDANF 488
            +     LS  H   +V  L   L Y+H      +IHRD+K SN+         +LD   
Sbjct: 126 QA-----LSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGL 177
Query: 489 NARLESSFTLTAGTMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGR 536
             + +   T    T  Y APE  L +    +  D++S G ++ E+  G+
Sbjct: 178 ARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 44  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 159
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 355 ILGRG--AFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++G+G      V  A +  +G    V+R      S+E  T    EL +     H N+V  
Sbjct: 32  VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRML---YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                   EL +V  +M  GS   ++   + D  N + +++     I+ G+  AL Y+H 
Sbjct: 92  RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH 146
Query: 467 ECEQQVIHRDIKASNIMLDAN---FNARLESSFTL----------------TAGTMGYLA 507
                 +HR +KAS+I++  +   + + L S+ ++                +   + +L+
Sbjct: 147 ---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203
Query: 508 PEYLQYGTA--TEKTDVFSYGVVVLEVACGRRPIE 540
           PE LQ        K+D++S G+   E+A G  P +
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 391 FLAELSIIACLRHKNLVQLLGWCAEK---GEL-LLVYEYMPNGSLDRMLYQDSENGVLLS 446
           F  E    A L H  +V +      +   G L  +V EY+   +L  +++ +      ++
Sbjct: 59  FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MT 114
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ES 494
               + ++     AL + HQ     +IHRD+K +NIM+ A    ++             +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 495 SFTLTA---GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           S T TA   GT  YL+PE  +  +   ++DV+S G V+ EV  G  P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAA---VKRSKHSHEGKTEFLAELSIIACLRHKNLVQLL-G 411
           +GRG+F  VYK     +    A   ++  K +   +  F  E   +  L+H N+V+    
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 412 WCAE-KGE--LLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           W +  KG+  ++LV E   +G+L   L  ++  +  VL SW  ++         L +LH 
Sbjct: 94  WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 467 ECEQQVIHRDIKASNIML----------DANFNARLESSFTLTA-GTMGYLAPEYLQYGT 515
                +IHRD+K  NI +          D        +SF     GT  + APE  +   
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE-EK 205
Query: 516 ATEKTDVFSYGVVVLEVACGRRP 538
             E  DV+++G   LE A    P
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYP 228

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 352 SNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           ++ +LG GA+  V  A    +G   AVK    +  H     F    ++  C  +KN+++L
Sbjct: 17  TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 410 LGWCAEKGELLLVYEYMPNGS-LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           + +  +     LV+E +  GS L  +  Q   N    S      +V  +A+AL +LH   
Sbjct: 77  IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-----RVVRDVAAALDFLHT-- 129
Query: 469 EQQVIHRDIKASNIM--------------LDANFNARLESS--------FTLTAGTMGYL 506
            + + HRD+K  NI+               D     +L +S         T   G+  Y+
Sbjct: 130 -KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 507 APEYLQYGT--AT---EKTDVFSYGVVVLEVACGRRP 538
           APE ++  T  AT   ++ D++S GVV+  +  G  P
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLV---QL 409
           +G GA+G V  A    +G   A+K+  ++ +  T     L EL I+   +H N++    +
Sbjct: 62  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           L      GE   VY  +    ++  L+Q   +   L+  H    +  L   L Y+H    
Sbjct: 122 LRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--- 176
Query: 470 QQVIHRDIKASNIMLDANFNARL--------------ESSFTLT--AGTMGYLAPE-YLQ 512
            QVIHRD+K SN++++ N   ++              E  + +T    T  Y APE  L 
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 513 YGTATEKTDVFSYGVVVLEVACGRR 537
               T+  D++S G +  E+   R+
Sbjct: 237 LHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 38  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 98  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 153
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 154 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 210
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPF 233

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 391 FLAELSIIACLRHKNLVQLLGWCAEK---GEL-LLVYEYMPNGSLDRMLYQDSENGVLLS 446
           F  E    A L H  +V +      +   G L  +V EY+   +L  +++ +      ++
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MT 114
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ES 494
               + ++     AL + HQ     +IHRD+K +NIM+ A    ++             +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 495 SFTLTA---GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           S T TA   GT  YL+PE  +  +   ++DV+S G V+ EV  G  P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 391 FLAELSIIACLRHKNLVQLLGWCAEK---GEL-LLVYEYMPNGSLDRMLYQDSENGVLLS 446
           F  E    A L H  +V +      +   G L  +V EY+   +L  +++ +      ++
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MT 114
Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ES 494
               + ++     AL + HQ     +IHRD+K +NIM+ A    ++             +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 495 SFTLTA---GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           S T TA   GT  YL+PE  +  +   ++DV+S G V+ EV  G  P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LDA      +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 64  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 179
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-----EGKTEFLAELSIIACLRHKNLVQL 409
           +LG G++G V +   + +    AVK  K         G+     E+ ++  LRHKN++QL
Sbjct: 12  LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 410 LG--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +   +  EK ++ +V EY   G +  ML    E    +   H       L   L YLH  
Sbjct: 72  VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAH--GYFCQLIDGLEYLHS- 127
Query: 468 CEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQY 513
             Q ++H+DIK  N++L      ++              + +   + G+  +  PE +  
Sbjct: 128 --QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-IAN 184
Query: 514 GTAT---EKTDVFSYGVVVLEVACGRRPIE 540
           G  T    K D++S GV +  +  G  P E
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKAS 480
           +V EY+   +L  +++ +      ++    + ++     AL + HQ     +IHRD+K +
Sbjct: 93  IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPA 145
Query: 481 NIMLDANFNARLE------------SSFTLTA---GTMGYLAPEYLQYGTATEKTDVFSY 525
           NIM+ A    ++             +S T TA   GT  YL+PE  +  +   ++DV+S 
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 526 GVVVLEVACGRRP 538
           G V+ EV  G  P
Sbjct: 206 GCVLYEVLTGEPP 218

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       +G+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y APE +      E  D++S G ++ E+ C +
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 335 PREFSYRE-LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA 393
           P ++ YRE +  AT   H  R LGRG+FG V++     +G   AVK+       + E   
Sbjct: 83  PVDYEYREEVHWAT---HQLR-LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFR 132
Query: 394 ELSIIAC--LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL 451
              ++AC  L    +V L G   E   + +  E +  GSL +++    E G L     R 
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE--DRA 187
Query: 452 NIVVGLA-SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------- 497
              +G A   L YLH    ++++H D+KA N++L ++ +      F              
Sbjct: 188 LYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 498 -LTA----GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
            LT     GT  ++APE +   +   K DV+S   ++L +  G  P
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 335 PREFSYRE-LRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA 393
           P ++ YRE +  AT   H  R LGRG+FG V++     +G   AVK+       + E   
Sbjct: 64  PVDYEYREEVHWAT---HQLR-LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFR 113
Query: 394 ELSIIAC--LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL 451
              ++AC  L    +V L G   E   + +  E +  GSL +++    E G L     R 
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE--DRA 168
Query: 452 NIVVGLA-SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------- 497
              +G A   L YLH    ++++H D+KA N++L ++ +      F              
Sbjct: 169 LYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
Query: 498 -LTA----GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
            LT     GT  ++APE +   +   K DV+S   ++L +  G  P
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKAS 480
           +V EY+   +L  +++ +      ++    + ++     AL + HQ     +IHRD+K +
Sbjct: 110 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPA 162
Query: 481 NIMLDANFNARL------------ESSFTLTA---GTMGYLAPEYLQYGTATEKTDVFSY 525
           NIM+ A    ++             +S T TA   GT  YL+PE  +  +   ++DV+S 
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 526 GVVVLEVACGRRP 538
           G V+ EV  G  P
Sbjct: 223 GCVLYEVLTGEPP 235

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-------AELSIIACLRHKNLV 407
           ILG+GA  NV++     +G + A+K   +       FL        E  ++  L HKN+V
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNN-----ISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +L     E      +L+ E+ P GSL  +L + S N   L     L ++  +   + +L 
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 466 QECEQQVIHRDIKASNIMLD-----------ANFNARLE----SSFTLTAGTMGYLAPEY 510
              E  ++HR+IK  NIM              +F A  E      F    GT  YL P+ 
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 511 LQYGTATEK--------TDVFSYGVVVLEVACGRRPIERETEG 545
            +     +          D++S GV     A G  P  R  EG
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF-RPFEG 228

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 33/214 (15%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           ++G+G FG VY   +    ++  +   + + +    F  E+      RH+N+V  +G C 
Sbjct: 40  LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENG-VLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
               L ++          R LY    +  ++L       I   +   + YLH    + ++
Sbjct: 100 SPPHLAIITSLCKG----RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 474 HRDIKASNIMLD------ANFN----------ARLESSFTLTAGTMGYLAPEYL-QYGTA 516
           H+D+K+ N+  D       +F            R E    +  G + +LAPE + Q    
Sbjct: 153 HKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 517 TEK--------TDVFSYGVVVLEVACGRRPIERE 542
           TE+        +DVF+ G +  E+     P + +
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 36/241 (14%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTE---FLAELS 396
           +E+R     F   +++GRGAF  V       +G V A+K  +K     + E   F  E  
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVV 455
           ++     + + QL     ++  L LV EY   G L  +L +  E     ++ ++   IV+
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 456 GLASA--LTYLHQECEQQVIHRDIKASNIMLDANFNARLE---SSFTLTA---------- 500
            + S   L Y         +HRDIK  NI+LD   + RL    S   L A          
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 501 GTMGYLAPEYLQ-------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
           GT  YL+PE LQ        G+   + D ++ GV   E+  G+ P   ++       +V 
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 554 W 554
           +
Sbjct: 285 Y 285

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ ++A G  P 
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPF 238

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSV--AAVKRSKHSHEGK--TEFLAELSIIACLRHKNLVQLLG 411
           LG G FG+V +  +         A+K  K   E     E + E  I+  L +  +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C  +  L+LV E    G L + L    E   + +    L+ V   +  + YL    E+ 
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLE---EKN 456
Query: 472 VIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMG-----YLAPEYLQYGT 515
            +HR++ A N++L     A++ S F L           TA + G     + APE + +  
Sbjct: 457 FVHRNLAARNVLLVNRHYAKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 516 ATEKTDVFSYGVVVLE-VACGRRPIER 541
            + ++DV+SYGV + E ++ G++P ++
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKK 542

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 75/203 (36%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         +  + AVK  +           E+     LRH N+V+       
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L ++ EY   G L    Y+   N    S          L S ++Y H     Q+ HR
Sbjct: 88  PTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVSYCHS---MQICHR 140
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S    T GT  Y+APE L       K  D
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIAD 200
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 201 VWSCGVTLYVMLVGAYPFEDPEE 223

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 26  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 86  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLL 137
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 138 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y APE +      E  D++S G ++ E+ C +
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 75  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLL 126
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 127 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y APE +      E  D++S G ++ E+ C +
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 76  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 132
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 76  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 132
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 15  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 75  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 131
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 132 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--KTEFLAELSIIACLRHKNLV 407
           F    +LG GA+G V  A    +G + A+K+ +   +       L E+ I+   +H+N++
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 408 QLLGWCAEKG-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
            +             E+ ++ E M    L R++     +  +LS  H    +     A+ 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLSDDHIQYFIYQTLRAVK 126
Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------------------ESSFTLTA 500
            LH      VIHRD+K SN+++++N + ++                      +S      
Sbjct: 127 VLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 501 GTMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            T  Y APE  L     +   DV+S G ++ E+   RRPI
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 90  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 146
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 147 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y APE +      E  D++S G ++ E+ C +
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 71  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 127
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
                 V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 128 N---XGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 30  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 90  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 146
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 147 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD-------HERMSYLL 125
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 126 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 49/223 (21%)
Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELS 396
           E+R+  R       +G GA+G V  A    +G+  A+K+     +  +E  A     EL 
Sbjct: 22  EVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELR 76
Query: 397 IIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDR-------MLYQDSENGVLLSWYH 449
           ++  +RH+N++ LL              + P+ +LD        M +  ++ G L+  + 
Sbjct: 77  LLKHMRHENVIGLLD------------VFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HE 123
Query: 450 RLN------IVVGLASALTYLHQECEQQVIHRDIKASNI---------MLDANFNARLES 494
           +L       +V  +   L Y+H      +IHRD+K  N+         +LD     + +S
Sbjct: 124 KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 495 SFTLTAGTMGYLAPEY-LQYGTATEKTDVFSYGVVVLEVACGR 536
                  T  Y APE  L +   T+  D++S G ++ E+  G+
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 38  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 98  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 154
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 155 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 242

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 91  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 147
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 91  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 147
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 31  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 91  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 147
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 148 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 31/218 (14%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAEL 395
           R ++   RG    R LG+G F   Y+     +  V A K    S     H+ K +   E+
Sbjct: 39  RTMKRYMRG----RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEI 93
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +I   L + ++V   G+  +   + +V E     SL  +  +        + Y     + 
Sbjct: 94  AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGT 502
           G+     YLH     +VIHRD+K  N+ L+ + + ++             E   TL  GT
Sbjct: 154 GVQ----YLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-CGT 205
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
             Y+APE L     + + D++S G ++  +  G+ P E
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 166
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 167 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 71  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 127
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 128 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 48/226 (21%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFL-------AELSIIACLRHKNLV 407
           ILG+GA  NV++     +G + A+K   +       FL        E  ++  L HKN+V
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNN-----ISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +L     E      +L+ E+ P GSL  +L + S N   L     L ++  +   + +L 
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 466 QECEQQVIHRDIKASNIMLD-----------ANFNARLE----SSFTLTAGTMGYLAPEY 510
              E  ++HR+IK  NIM              +F A  E      F    GT  YL P+ 
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 511 LQ-----------YGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
            +           YG      D++S GV     A G  P  R  EG
Sbjct: 187 YERAVLRKDHQKKYGAT---VDLWSIGVTFYHAATGSLPF-RPFEG 228

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 174
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 175 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 159
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 16  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 76  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 132
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 133 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 71  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 127
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 128 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 14  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 74  VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 130
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 131 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 218

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 160
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 159
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 411 GW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  ++ LV   M    L+ ++         L+  H   ++  +   L Y+
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLM-GADLNNIV-----KCAKLTDDHVQFLIYQILRGLKYI 137
Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYG 514
           H      +IHRD+K SN+         +LD       +   T    T  Y APE  L + 
Sbjct: 138 HS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  GR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 49  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 106
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 107 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 159
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 160
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 43  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 159
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 160 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 160
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 44  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 160
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 161 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 84  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSG---SVAAVKRSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     ++  V++ + S  G+      + +   L  K       
Sbjct: 58  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 174
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 175 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 107
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 108 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 97
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 98  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 153
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK------N 405
           +LG G FG+VY     S     A+K   + + S  G+      + +   L  K       
Sbjct: 63  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +++LL W       +L+ E  P    D   +  +E G L     R +    +  A+ + H
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELAR-SFFWQVLEAVRHCH 179
Query: 466 QECEQQVIHRDIKASNIMLDANF----------NARLESS-FTLTAGTMGYLAPEYLQYG 514
             C   V+HRDIK  NI++D N            A L+ + +T   GT  Y  PE+++Y 
Sbjct: 180 N-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 236
Query: 515 TATEKT-DVFSYGVVVLEVACGRRPIERETE 544
               ++  V+S G+++ ++ CG  P E + E
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 267

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  ++ LV   M    L+ ++         L+  H   ++  +   L Y+
Sbjct: 88  DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-----LTDDHVQFLIYQILRGLKYI 141
Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYG 514
           H      +IHRD+K SN+         +LD       +   T    T  Y APE  L + 
Sbjct: 142 HS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  ++ LV   M    L+ ++         L+  H   ++  +   L Y+
Sbjct: 88  DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-----LTDDHVQFLIYQILRGLKYI 141
Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYG 514
           H      +IHRD+K SN+         +LD       +   T    T  Y APE  L + 
Sbjct: 142 HS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQ 408
           R +G GA+G+V  AY A      AVK+         H  +T    EL ++  L+H+N++ 
Sbjct: 26  RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT--YRELRLLKHLKHENVIG 83
Query: 409 LLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
           LL          +  E+ LV   M    L+ ++   +     LS  H   +V  L   L 
Sbjct: 84  LLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA-----LSDEHVQFLVYQLLRGLK 137
Query: 463 YLHQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQ 512
           Y+H      +IHRD+K SN+         +LD     + +   T    T  Y APE  L 
Sbjct: 138 YIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLN 194
Query: 513 YGTATEKTDVFSYGVVVLEVACGR 536
           +    +  D++S G ++ E+  G+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 35  IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 92
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 93  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 126
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 213

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT  YLAP  +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAEL 395
           R ++   RG    R LG+G F   Y+     +  V A K    S     H+ K +   E+
Sbjct: 23  RTMKRYMRG----RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEI 77
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +I   L + ++V   G+  +   + +V E     SL  +  +        + Y     + 
Sbjct: 78  AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 137
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGT 502
           G+     YLH     +VIHRD+K  N+ L+ + + ++   F L               GT
Sbjct: 138 GVQ----YLHN---NRVIHRDLKLGNLFLNDDMDVKI-GDFGLATKIEFDGERKKDLCGT 189
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
             Y+APE L     + + D++S G ++  +  G+ P E
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  ++ LV   M    L+ ++         L+  H   ++  +   L Y+
Sbjct: 88  DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQK-----LTDDHVQFLIYQILRGLKYI 141
Query: 465 HQECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYG 514
           H      +IHRD+K SN+         +LD       +   T    T  Y APE  L + 
Sbjct: 142 HS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 515 TATEKTDVFSYGVVVLEVACGR 536
              +  D++S G ++ E+  GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 126
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 213

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 125
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 126 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 20  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 80  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 131
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 132 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 188
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 218

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 84  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 133
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 134 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 220

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 84
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 85  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 93
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 94  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 84/214 (39%), Gaps = 32/214 (14%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRS-KHSHEGKTEFLAELSIIACLRHKNLVQLLGWC- 413
           LG G F  V        G   A+KR   H  + + E   E  +     H N+++L+ +C 
Sbjct: 37  LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 414 ---AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                K E  L+  +   G+L   + +  + G  L+    L +++G+   L  +H    +
Sbjct: 97  RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AK 153
Query: 471 QVIHRDIKASNIML---------------------DANFNARLESSFTLTAGTMGYLAPE 509
              HRD+K +NI+L                     + +  A     +     T+ Y APE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 510 YLQ---YGTATEKTDVFSYGVVVLEVACGRRPIE 540
                 +    E+TDV+S G V+  +  G  P +
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 75/203 (36%), Gaps = 21/203 (10%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE 415
           +G G FG         +  + AVK  +   +       E+     LRH N+V+       
Sbjct: 27  IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHR 475
              L +V EY   G L    ++   N    S          L S ++Y H     QV HR
Sbjct: 87  PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYAHA---MQVAHR 139
Query: 476 DIKASNIMLDANFNARLE-------------SSFTLTAGTMGYLAPEYLQYGTATEK-TD 521
           D+K  N +LD +   RL+             S      GT  Y+APE L       K  D
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVAD 199
Query: 522 VFSYGVVVLEVACGRRPIERETE 544
           V+S GV +  +  G  P E   E
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEE 222

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 133
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 134 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 220

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 85
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 86  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 141
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 200 QTVDIWSVGCIMAELLTGR 218

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 32/212 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACL 401
           +  + +   + +G GA G V  A+    G   AVK+     + +T       EL ++ C+
Sbjct: 19  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L ++++ + +       + R++ ++
Sbjct: 79  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELD-------HERMSYLL 130
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL---------ESSFTLT--AGTM 503
             +   + +LH      +IHRD+K SNI++ ++   ++          ++F +T    T 
Sbjct: 131 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR 187
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACG 535
            Y APE +      E  D++S G ++ E+  G
Sbjct: 188 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 84
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 85  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 50  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 107
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 108 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 98
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 99  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 89
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 90  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 170
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 171 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            Y APE +      E  D++S G ++ E+
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEM 256

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAEL 395
           R ++   RG    R LG+G F   Y+     +  V A K    S     H+ K +   E+
Sbjct: 39  RTMKRYMRG----RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEI 93
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +I   L + ++V   G+  +   + +V E     SL  +  +        + Y     + 
Sbjct: 94  AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGT 502
           G+     YLH     +VIHRD+K  N+ L+ + + ++   F L               GT
Sbjct: 154 GV----QYLHN---NRVIHRDLKLGNLFLNDDMDVKI-GDFGLATKIEFDGERKKDLCGT 205
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
             Y+APE L     + + D++S G ++  +  G+ P E
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 110
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 111 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 224
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 92
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 93  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 92
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 93  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 29  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 86
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 87  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 142
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 201 QTVDIWSVGCIMAELLTGR 219

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQLL 410
           +G GA+G+V  A    SG   A+K  K S   ++E  A     EL ++  ++H+N++ LL
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 411 GWCAEKGELLLVYEY---MP--NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                   L   Y++   MP     L +++      G+  S      +V  +   L Y+H
Sbjct: 90  DVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 466 QECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPEY-LQYGT 515
                 V+HRD+K  N+         +LD       ++  T    T  Y APE  L +  
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 516 ATEKTDVFSYGVVVLEVACGR 536
             +  D++S G ++ E+  G+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF---LAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 402 RHKNLVQLLG------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ LV E M + +L +++  + +       + R++ ++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD-------HERMSYLL 170
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 171 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVA 533
            Y APE +      E  D++S G ++ E+ 
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 86  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 139
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEM 217

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 92
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 93  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 49  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 106
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 107 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 89
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 90  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 80  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLE-- 132
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEM 211

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 76  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 129
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 98
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 99  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 76  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 129
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 94
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 95  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 89
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 90  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 99
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 100 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 93
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 94  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 99
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 100 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 93
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 94  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 89
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 90  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAEL 395
           R ++   RG    R LG+G F   Y+     +  V A K    S     H+ K +   E+
Sbjct: 39  RTMKRYMRG----RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEI 93
Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +I   L + ++V   G+  +   + +V E     SL  +  +        + Y     + 
Sbjct: 94  AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------------AGT 502
           G+     YLH     +VIHRD+K  N+ L+ + + ++   F L               GT
Sbjct: 154 GV----QYLHN---NRVIHRDLKLGNLFLNDDMDVKI-GDFGLATKIEFDGERKKXLCGT 205
Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE 540
             Y+APE L     + + D++S G ++  +  G+ P E
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 86  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 139
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEM 217

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 99
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 100 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P ++ YRE        H  R LGRG+FG V++     +G   AVK+       + E    
Sbjct: 62  PVDYEYRE--EVHWMTHQPR-LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRV 112
Query: 395 LSIIAC--LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
             ++AC  L    +V L G   E   + +  E +  GSL +++ Q    G L     R  
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRAL 167
Query: 453 IVVGLA-SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------- 497
             +G A   L YLH    ++++H D+KA N++L ++ +      F               
Sbjct: 168 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 224
Query: 498 LTA----GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           LT     GT  ++APE +       K D++S   ++L +  G  P
Sbjct: 225 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACG 535
            Y APE +      E  D++S G ++ E+  G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQLL 410
           +G GA+G+V  A    SG   A+K  K S   ++E  A     EL ++  ++H+N++ LL
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 411 GWCAEKGELLLVYEY---MP--NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                   L   Y++   MP     L +++      G+  S      +V  +   L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 466 QECEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPEY-LQYGT 515
                 V+HRD+K  N+         +LD       ++  T    T  Y APE  L +  
Sbjct: 162 SAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 516 ATEKTDVFSYGVVVLEVACGR 536
             +  D++S G ++ E+  G+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 355 ILGRGAFGNVYKAYFASSGSVAAVK---RSK--------HSHEGKTEFLAELSIIACLRH 403
           +LG+G FG V+  +  +     A+K   R++         S     E      + A   H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
             +++LL W   +   +LV E  P  + D   Y  +E G L     R      + +A+ +
Sbjct: 98  PGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYI-TEKGPLGEGPSRC-FFGQVVAAIQH 154
Query: 464 LHQECEQQVIHRDIKASNIMLDANFN-ARL----------ESSFTLTAGTMGYLAPEYL- 511
            H    + V+HRDIK  NI++D     A+L          +  +T   GT  Y  PE++ 
Sbjct: 155 CHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           ++        V+S G+++ ++ CG  P ER+ E
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 93
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 94  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAG----------TM 503
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAG          T 
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACG 535
            Y APE +      E  D++S G ++ E+  G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 80  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 133
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEM 211

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 31/211 (14%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSG------SVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           F   R+LG+G FG+V +A            +V  +K    +     EFL E + +    H
Sbjct: 25  FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 404 KNLVQLLGWCAE---KGEL---LLVYEYMPNGSLDRMLYQD--SENGVLLSWYHRLNIVV 455
            ++ +L+G       KG L   +++  +M +G L   L      EN   L     +  +V
Sbjct: 85  PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 456 GLASALTYLHQECEQQVIHRDIKASNIML---------DANFNARLESSFTLTAGT---- 502
            +A  + YL     +  IHRD+ A N ML         D   + ++ S      G     
Sbjct: 145 DIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 503 -MGYLAPEYLQYGTATEKTDVFSYGVVVLEV 532
            + +LA E L     T  +DV+++GV + E+
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEI 232

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 356 LGRGAFGNVYKAYF-ASSGSVA--AVKRSK----HSHEGKTEFLAELSIIACLRHKNLVQ 408
           LG G+FG V +  + A SG     AVK  K       E   +F+ E++ +  L H+NL++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 409 LLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           L G       + +V E  P GSL DR+  +  +   LL    R  + V  A  + YL   
Sbjct: 76  LYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQV--AEGMGYLES- 129
Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTLTAG----------------TMGYLAPEYL 511
             ++ IHRD+ A N++L      ++   F L                      + APE L
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 512 QYGTATEKTDVFSYGVVVLEV 532
           +  T +  +D + +GV + E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEM 207

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P ++ YRE        H  R+ GRG+FG V++     +G   AVK+ +       E    
Sbjct: 48  PVDYEYRE--EVHWMTHQPRV-GRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRV 98
Query: 395 LSIIAC--LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
             ++AC  L    +V L G   E   + +  E +  GSL +++ Q    G L     R  
Sbjct: 99  EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRAL 153
Query: 453 IVVGLA-SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------- 497
             +G A   L YLH    ++++H D+KA N++L ++ +      F               
Sbjct: 154 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210
Query: 498 LTA----GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           LT     GT  ++APE +       K D++S   ++L +  G  P
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF-LAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K   + K     + E  L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV+L     +   L +V EY+  G +   L +        + ++   IV+       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH 158
Query: 466 QECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA 516
                 +I+RD+K  N+++D           F  R++       GT   LAPE +     
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGY 215
Query: 517 TEKTDVFSYGVVVLEVACGRRPI 539
            +  D ++ GV++ E+A G  P 
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACL 401
           +  + + + + +G GA G V  AY A      A+K+     + +T       EL ++ C+
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 402 RHKNLVQLLGW------CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN-IV 454
            HKN++ LL          E  ++ +V E M + +L +++  + +       + R++ ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELD-------HERMSYLL 132
Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR-LESSFTLTAGTMGYLAPEYL-Q 512
             +   + +LH      +IHRD+K SNI++ ++   + L+     TAGT   + PE + +
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 513 YGTA---------TEKTDVFSYGVVVLEVACG 535
           Y  A          E  D++S G ++ E+  G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P ++ YRE        H  R+ GRG+FG V++     +G   AVK+ +       E    
Sbjct: 64  PVDYEYRE--EVHWMTHQPRV-GRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRV 114
Query: 395 LSIIAC--LRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
             ++AC  L    +V L G   E   + +  E +  GSL +++ Q    G L     R  
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRAL 169
Query: 453 IVVGLA-SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------- 497
             +G A   L YLH    ++++H D+KA N++L ++ +      F               
Sbjct: 170 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 226
Query: 498 LTA----GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           LT     GT  ++APE +       K D++S   ++L +  G  P
Sbjct: 227 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 107
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 108 DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +        T  Y APE  L +    
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 518 EKTDVFSYGVVVLEVACGR 536
           +  D++S G ++ E+  GR
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  A+   +G   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 88  DVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATE 518
               +IHRD+K SN+         +LD       +   T    T  Y APE +       
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 519 KT-DVFSYGVVVLEVACGR 536
           +T D++S G ++ E+  GR
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLL 410
           +G GA+G+V  +Y   SG   AVK+         H  +T    EL ++  ++H+N++ LL
Sbjct: 59  VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 116
Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV---LLSWYHRLNIVVGLASALTYLHQE 467
                   L    E+     +  ++  D  N V    L+  H   ++  +   L Y+H  
Sbjct: 117 DVFTPATSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 172
Query: 468 CEQQVIHRDIKASNI---------MLDANFNARLESSFTLTAGTMGYLAPE-YLQYGTAT 517
               +IHRD+K SN+         +LD       +   T    T  Y APE  L +    
Sbjct: 173 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 518 EKTDVFSYGVVVLEVACGR 536
              D++S G ++ E+  GR
Sbjct: 231 MTVDIWSVGCIMAELLTGR 249
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	645
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-121
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-108
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-105
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-64
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	6e-55
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	1e-54
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	5e-54
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	7e-54
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	2e-53
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	2e-53
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	4e-53
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	1e-52
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	3e-52
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	3e-51
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	1e-50
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	2e-50
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-50
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-50
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	4e-50
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	5e-50
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	2e-49
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	3e-49
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	5e-49
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	2e-48
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-48
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	2e-48
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-47
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	7e-47
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-46
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-46
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-45
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	3e-45
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	4e-45
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	7e-44
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-42
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-42
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-40
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-39
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-38
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-38
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-37
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-37
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-37
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-37
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-37
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-35
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-35
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-35
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-35
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-34
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-34
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-34
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-34
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-34
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-34
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-33
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-33
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-33
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-32
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-32
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-32
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-32
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-32
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-32
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-32
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-32
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-32
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-32
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-32
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-32
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	8e-32
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-31
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-31
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-31
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-31
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-31
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-31
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-31
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-31
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-31
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-31
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-31
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-31
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-31
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-31
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-31
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-30
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-30
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-30
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-30
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-30
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-30
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-30
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-29
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-29
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-29
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-29
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-29
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-29
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-29
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-29
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-29
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-28
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-28
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-28
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-28
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	5e-28
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	7e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-28
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-27
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-27
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-27
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-27
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-27
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-26
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-26
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-26
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	9e-26
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-25
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-25
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-25
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-25
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-25
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-25
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-24
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-24
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-24
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-24
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-24
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-24
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-24
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-24
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-24
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-24
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-24
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-23
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-23
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-23
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-23
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-23
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-23
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-23
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-23
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-23
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-23
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-22
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-22
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-21
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-21
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-21
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-21
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-20
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-20
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-20
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-20
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-19
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-19
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-19
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	1e-18
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-18
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-18
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-18
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-18
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-18
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-18
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-17
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-17
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-17
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-17
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-17
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-17
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-17
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-17
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-17
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-17
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-17
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-16
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-16
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-16
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-16
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-16
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-16
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-15
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-15
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-15
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-15
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	4e-15
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-15
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	5e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-15
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-14
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-14
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-14
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-14
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-14
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-14
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-14
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-13
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-13
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-12
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-11
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-11
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-11
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-10
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-08
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	2e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	8e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	9e-07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	8e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-05
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	3e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-05
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	9e-05
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	2e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  361 bits (928), Expect = e-121
 Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 19/296 (6%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEG-KTEFL 392
            + FS REL+ A+  F +  ILGRG FG VYK    + G++ AVKR  +   +G + +F 
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQ 75

Query: 393 AELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN 452
            E+ +I+   H+NL++L G+C    E LLVY YM NGS+   L +  E+   L W  R  
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------------TL 498
           I +G A  L YLH  C+ ++IHRD+KA+NI+LD  F A +   F              T 
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV-GDFGLAKLMDYKDTHVTTA 194

Query: 499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIE-RETEGHKMVNLVDWVWG 557
             GT+G++APEYL  G ++EKTDVF YGV++LE+  G+R  +         V L+DWV G
Sbjct: 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254

Query: 558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA 613
           L  E ++    D  L G + ++E+++L+ V L C       RP M  V ++L  + 
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  329 bits (845), Expect = e-108
 Identities = 101/290 (34%), Positives = 149/290 (51%), Gaps = 22/290 (7%)

Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAE 394
                 +L  AT  F    ++G G FG VYK      G+  A+KR    S +G  EF  E
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETE 85

Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
           +  ++  RH +LV L+G+C E+ E++L+Y+YM NG+L R LY      + +SW  RL I 
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------------TLT 499
           +G A  L YLH      +IHRD+K+ NI+LD NF  ++ + F               T+ 
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKI-TDFGISKKGTELDQTHLSTVV 201

Query: 500 AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY 559
            GT+GY+ PEY   G  TEK+DV+S+GVV+ EV C R  I + +   +MVNL +W    +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ-SLPREMVNLAEWAVESH 260

Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
             G++ +  D  L      + +++     + C    S  RPSM  V   L
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  320 bits (822), Expect = e-105
 Identities = 99/308 (32%), Positives = 154/308 (50%), Gaps = 39/308 (12%)

Query: 333 PGPREFSYRELRSATRGFHS------NRILGRGAFGNVYKAYFASSGSVAAVKR-----S 381
                FS+ EL++ T  F           +G G FG VYK Y   + +  AVK+      
Sbjct: 10  TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVD 67

Query: 382 KHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN 441
             + E K +F  E+ ++A  +H+NLV+LLG+ ++  +L LVY YMPNGSL   L    + 
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-CLDG 126

Query: 442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-- 499
              LSW+ R  I  G A+ + +LH+      IHRDIK++NI+LD  F A++ S F L   
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKI-SDFGLARA 182

Query: 500 -------------AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH 546
                         GT  Y+APE L+ G  T K+D++S+GVV+LE+  G   ++   E  
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241

Query: 547 KMVNLVDWVWGLYAEGRIIEA-ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRV 605
               L+D    +  E + IE   DK++N   +   ++ +  V   C +   + RP +++V
Sbjct: 242 ---LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297

Query: 606 FQILNNEA 613
            Q+L    
Sbjct: 298 QQLLQEMT 305

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  214 bits (547), Expect = 2e-64
 Identities = 62/312 (19%), Positives = 114/312 (36%), Gaps = 44/312 (14%)

Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAEL 395
            +     L   +       +  RG FG V+KA         AVK      +   +   E+
Sbjct: 12  VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNEYEV 69

Query: 396 SIIACLRHKNLVQLLGWCAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRL 451
             +  ++H+N++Q +G          +L L+  +   GSL   L  +      +SW    
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELC 124

Query: 452 NIVVGLASALTYLHQE-------CEQQVIHRDIKASNIMLDANFN--------ARLESSF 496
           +I   +A  L YLH++        +  + HRDIK+ N++L  N          A    + 
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184

Query: 497 TLT------AGTMGYLAPEYLQYG-----TATEKTDVFSYGVVVLEVACGRRPIERETEG 545
                     GT  Y+APE L+        A  + D+++ G+V+ E+A      +   + 
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244

Query: 546 HKMVNLVDWVWGLYAEGRIIEAADKRL------NGAFNEDEMKRLLLVGLSCANPDSSAR 599
           + M+   + +    +   + E    +       +       M  L      C + D+ AR
Sbjct: 245 Y-MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303

Query: 600 PSMRRVFQILNN 611
            S   V + +  
Sbjct: 304 LSAGCVGERITQ 315

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score =  186 bits (474), Expect = 6e-55
 Identities = 81/243 (33%), Positives = 118/243 (48%), Gaps = 16/243 (6%)

Query: 22  SNNMNFDFTSFNL--RNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFF 75
           +   +F F+ F     N+ L GD      GV+ LT          SS G   Y+ P+  +
Sbjct: 1   AEETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIW 60

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKN 134
           D  T   ASF + F F+I   N ++  DGLAFF++P      S GG LGL +S+   +  
Sbjct: 61  DSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTY 120

Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
           + VA+EFDT  +  F DP   HIG D++S+ SIKT         L +G      I Y + 
Sbjct: 121 QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVK-----WSLANGEAAKVLITYNSA 175

Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQ 251
           +++L   + Y +    + +L   +DLS  L   + VGFSA+T    G  E H + SWSF 
Sbjct: 176 VKLLVASLVYPS-SKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFA 234

Query: 252 TSG 254
           +  
Sbjct: 235 SKL 237

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score =  186 bits (472), Expect = 1e-54
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 16/254 (6%)

Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFDQE 78
           ++  +F F +FN  +  L GD+ + +  + LT+  G      SS G   Y++P+  +D+ 
Sbjct: 1   ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKS 60

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFV 137
           T   AS+ + F+ +I   N SS  DG+AF + P      S  G LG+ +S       + V
Sbjct: 61  TGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTV 120

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  + DP   HIG+D++S++SI+TA        L +G      I Y     +
Sbjct: 121 AVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTAS-----WGLANGQNAEILITYNAATSL 174

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTSG 254
           L   + + + +  + ++   +D++  L   + +GFSA+T   EG TE H + SWSF +  
Sbjct: 175 LVASLVHPS-RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKL 233

Query: 255 FRPVRPKLHPHNVS 268
             P      P +++
Sbjct: 234 --PDDSTTEPLDIA 245

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score =  184 bits (468), Expect = 5e-54
 Identities = 77/246 (31%), Positives = 127/246 (51%), Gaps = 15/246 (6%)

Query: 22  SNNMNFDFTSFN---LRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVPFF 75
           S++++F F +F      +I   GD+    G + L +          S+G  +Y++PV  +
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL---T 132
           D +T + ASF + F+F +     +   DGLAFF++P +  +  AG  LGL N S     +
Sbjct: 62  DNKTESVASFYTEFTFFLKI-TGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPS 120

Query: 133 KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
           KN+ VA+EFDT  +P+F +P   HIG++++S+ S+ T     +  D+ SG + TA I Y 
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--WEDSDIFSGKIATARISYD 178

Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTEL-HMIQSWSFQ 251
               +L V +SY        +L  ++D+   L  ++ VG SAST  +  L   I SW F 
Sbjct: 179 GSAEILTVVLSYP--DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236

Query: 252 TSGFRP 257
           ++    
Sbjct: 237 SNLQST 242

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score =  183 bits (466), Expect = 7e-54
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 15/239 (6%)

Query: 22  SNNMNFDFTSFNLRNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFFDQ 77
           SN++ F+F  FN  N+ L  D S   +G + LT           S G   Y+ P+  +D 
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 78  ETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFV 137
            T T ASF + F+F+I   N +   DGLAF + P        GG LGL + S  +    V
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSN-SNFHTV 119

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  + DP E HIG+D++S+ SIKT        D  +G      I Y +   +
Sbjct: 120 AVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRW-----DFVNGENAEVLITYDSSTNL 173

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           L   + Y + +  + ++   +DL   L   + VGFSA+T   +G+ E + + SWSF + 
Sbjct: 174 LVASLVYPS-QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASK 231

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score =  182 bits (462), Expect = 2e-53
 Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 16/240 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+ET
Sbjct: 1   TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRET 57

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
              A+F + F+F IN  N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA
Sbjct: 58  GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVA 117

Query: 139 IEFDTRLDPHFDDPDE-NHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  +   HIG+D++S++S+ T         L++G      I +     +
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKS-----WKLQNGEEANVVIAFNAATNV 172

Query: 198 LKVFMSYSN----LKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
           L V ++Y N     +  +  L   + L   +   + +GFSA+T      H + SWSF + 
Sbjct: 173 LTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSE 232

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score =  181 bits (461), Expect = 2e-53
 Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 14/237 (5%)

Query: 22  SNNMNFDFTSFNL--RNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQE 78
           +  ++F+F SF+     I   GD + L NG I LT       +S G ++Y  PV  +   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTN--LNKVNSVGRVLYAMPVRIWSSA 58

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNKFV 137
           T   ASF + FSF + ++      DG+ FFI+P++  + +     G +  S       FV
Sbjct: 59  TGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFV 118

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
            +EFDT  +  ++DP  +H+G+D++S++S+KT        +  SG V+   + Y +  + 
Sbjct: 119 GVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW-----NSVSGAVVKVTVIYDSSTKT 173

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-EGSTELHMIQSWSFQTS 253
           L V ++          +   +DL   L   +  GFSAS   G  ++H+I+SWSF ++
Sbjct: 174 LSVAVTND--NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score =  181 bits (461), Expect = 4e-53
 Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 19/243 (7%)

Query: 23  NNMNFDFTSF------NLRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVP 73
           N +NF +  F      N   IT LGD+    G + LT+         SS+G   Y+ PV 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 74  FFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-- 131
            +D  T   ASF + F+F + N    +  DGLAFF++P +  +   GG LGL        
Sbjct: 62  LWDS-TGKAASFYTSFTFLLKNYGAPT-ADGLAFFLAPVDSSVKDYGGFLGLFRHETAAD 119

Query: 132 -TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWID 190
            +KN+ VA+EFDT ++  ++DP   HIG+D++S+ S+ T     +  D    ++ TA I 
Sbjct: 120 PSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR--WENDDAYGSSIATAHIT 177

Query: 191 YKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
           Y    ++L V +SY +      +L   +DL+  L   + +GFSA   G  E+  I SW F
Sbjct: 178 YDARSKILTVLLSYEH--GRDYILSHVVDLAKVLPQKVRIGFSAGV-GYDEVTYILSWHF 234

Query: 251 QTS 253
            ++
Sbjct: 235 FST 237

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score =  179 bits (456), Expect = 1e-52
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 16/242 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLR-NGVIGLTRELGVPAS--SSGSLIYNNPVPFFD 76
           + +++F F  F  N   +   GD+ +   GV+ LT  +    S  S G  +Y  P   +D
Sbjct: 1   TGSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NK 135
             T   ASF + F+F I   NP++  DGLAFF++P +      GG LG+       K N+
Sbjct: 61  STTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQ 120

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +  +D P   H+G++++S+ESIKT        +  +G V   +I Y+   
Sbjct: 121 IVAVEFDTFSNGDWD-PKGRHLGINVNSIESIKTVP-----WNWTNGEVANVFISYEAST 174

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + L   + Y +    + ++   +D+   L   +  GFSA+T   +G  + + + SWSF++
Sbjct: 175 KSLTASLVYPS-LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFES 233

Query: 253 SG 254
           + 
Sbjct: 234 NL 235

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score =  179 bits (455), Expect = 3e-52
 Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 12/240 (5%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTR-ELGVPASSSGSLIYNNPVPFFDQ 77
           S++++F F +F  N ++++  G+ S +  GV+ L +    +P  + G   Y  P+  ++ 
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 78  ETNTTASFTSRFSFSIN-NVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLT-KNK 135
            T   ASF + FSF +  + NP +  DGL FF++P +  L  AGG  GL N ++     +
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQ 120

Query: 136 FVAIEFDTRLD-PHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
            VA+EFDT     +F DP   HIG+D++ ++SI               NV    I Y+  
Sbjct: 121 TVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERW---NKRYGLNNVANVEIIYEAS 177

Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-EGSTELHMIQSWSFQTS 253
            + L   ++Y +    +  +   +DL   L   + VGFS ST  G    H + +W F ++
Sbjct: 178 SKTLTASLTYPS-DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTST 236

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score =  175 bits (445), Expect = 3e-51
 Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 22  SNNMNFDFTSFNLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETN 80
           SN+ +F+  +FN  N+ L GD +    G + LT   G    S G   Y+ P+   D+  +
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 81  TTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAI 139
             ASF++ F+F IN  N  +   GLAF + P        G  LGL N++        VA+
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAV 120

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
            FDT           N I +D++S+  I T           +G      I Y +    L+
Sbjct: 121 VFDT---------VSNRIEIDVNSIRPIATESC---NFGHNNGEKAEVRITYDSPKNDLR 168

Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           V + Y +       +   + L   ++  + VGFSA++   + +TE H + SWSF ++
Sbjct: 169 VSLLYPS-SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN 224

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score =  174 bits (442), Expect = 1e-50
 Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 15/238 (6%)

Query: 26  NFDFTSF-NLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTA 83
           +F++T F +  ++   GD     +G + +  +  V   ++   +Y  PVP +D  T   A
Sbjct: 2   SFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVN-RTTSHALYATPVPIWDSATGNVA 60

Query: 84  SFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSSQLTKNKFVAIEF 141
           SF + FSF ++NV      DG+ FF++P    +   S GG LG+ +SS  ++N+FVA+EF
Sbjct: 61  SFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSSN-SQNQFVAVEF 119

Query: 142 DTRLDP-HFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKV 200
           D+  +         +HIG+D++S+ S+K  +      +  SG++  A I Y +D ++L V
Sbjct: 120 DSHPNVWDPKSLRSSHIGIDVNSIMSLKAVN-----WNRVSGSLEKATIIYDSDTKILTV 174

Query: 201 FMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG-STELHMIQSWSFQTSGFRP 257
            M++ N       +   IDL   L   + VGFSA+T     E H I SWSF ++   P
Sbjct: 175 VMTHQN--GQITTISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTSTLKEP 230

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score =  175 bits (444), Expect = 2e-50
 Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 14  LLNFSFVLSNNMNFDFTSFNL--RNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLI 67
           +L      +++++F F +F+   RN+   GD    RN ++ LTR         S+ G ++
Sbjct: 1   MLLNRANSTDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRIL 60

Query: 68  YNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL-GSAGGCLGLV 126
           ++  V  +++ TN  A+  ++FSF +++   +       F   PD  I  GSAGG LGL 
Sbjct: 61  HSAQVRLWEKSTNRVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLLGLF 120

Query: 127 NSSQL---TKNKFVAIEFDTRLDPH--FDDPDENHIGLDIDSLESIKTADPILQGIDLKS 181
           N       + N+ +A+EFDT    +    DP+  HIG+D++S+ S K         + + 
Sbjct: 121 NPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVR-----WERRE 175

Query: 182 GNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTE 241
           G  +   + Y    R + V  +Y +       L   +DL+  L   + VGFSA++    +
Sbjct: 176 GKTLNVLVTYNPSTRTIDVVATYPD--GQRYQLSHVVDLTTILPEWVRVGFSAASGEQFQ 233

Query: 242 LHMIQSWSFQTSGFRPVRPKLHPHNVSD 269
            H ++SWSF ++       K   +   D
Sbjct: 234 THNLESWSFTST-LLYTAQKEDEYLARD 260

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  176 bits (448), Expect = 2e-50
 Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 35/270 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
            ++GRGAFG V KA +       A+K+ +   E K  F+ EL  ++ + H N+V+L G C
Sbjct: 14  EVVGRGAFGVVCKAKW--RAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKLYGAC 70

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
                + LV EY   GSL  +L   +E     +  H ++  +  +  + YLH    + +I
Sbjct: 71  LNP--VCLVMEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127

Query: 474 HRDIKASNIMLDANFN---------AR-LESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K  N++L A            A  +++  T   G+  ++APE  +    +EK DVF
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 187

Query: 524 SYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR--IIEAADKRLNGAFNEDEM 581
           S+G+++ EV   R+P +              +W ++   R  +I+   K          +
Sbjct: 188 SWGIILWEVITRRKPFD-----EIGGPAFRIMWAVHNGTRPPLIKNLPK---------PI 233

Query: 582 KRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + L+     C + D S RPSM  + +I+ +
Sbjct: 234 ESLM---TRCWSKDPSQRPSMEEIVKIMTH 260

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  175 bits (447), Expect = 3e-50
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 41/276 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             +G G+FG V++A +   GS  AVK         E   EFL E++I+  LRH N+V  +
Sbjct: 43  EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G   +   L +V EY+  GSL R+L   S     L    RL++   +A  + YLH     
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNP 158

Query: 471 QVIHRDIKASNIMLDANFN--------ARLESSFTLT----AGTMGYLAPEYLQYGTATE 518
            ++HR++K+ N+++D  +         +RL++S  L+    AGT  ++APE L+   + E
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---IIEAADKRLNGA 575
           K+DV+S+GV++ E+A  ++P          +N    V  +  + +   I    +      
Sbjct: 219 KSDVYSFGVILWELATLQQP-------WGNLNPAQVVAAVGFKCKRLEIPRNLNP----- 266

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               ++  ++     C   +   RPS   +  +L  
Sbjct: 267 ----QVAAII---EGCWTNEPWKRPSFATIMDLLRP 295

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score =  173 bits (439), Expect = 4e-50
 Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 18/240 (7%)

Query: 26  NFDFTSFNL--RNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFFDQET 79
           +F F+ F     N+TL G     ++GV+ LT+          S+G  +Y  PV  +D  T
Sbjct: 5   SFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTT 64

Query: 80  NTTASFTSRFSFSINNVNPSSFGD-GLAFFISPDNQILGSAGGCLGLVN-SSQLTKNKFV 137
            T ASF +RFSFSI           GL FF+ P         G LG+ N S Q    + +
Sbjct: 65  GTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTL 124

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  +D P   HIG+D++S+ SIKT         L +G V    I Y    ++
Sbjct: 125 AVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQP-----FQLDNGQVANVVIKYDAPSKI 178

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTSG 254
           L V + Y +       +   +D+   L   + VG S +T     + E H + SWSFQ S 
Sbjct: 179 LHVVLVYPS-SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQASL 237

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score =  173 bits (440), Expect = 5e-50
 Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 17/244 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFF 75
           +  ++F +  F     N+ L GD     +G + L +         SS G  +Y+ P+  +
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNK 135
           D+ET + ASF + F+F+    +     DGLAFF++P +    +  G LGL N ++ + ++
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENE-SGDQ 119

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +    DP   HIG++++S+ SIKT        DL +  V    I Y    
Sbjct: 120 VVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTS-----WDLANNKVAKVLITYDAST 172

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST--EGSTELHMIQSWSFQTS 253
            +L   + Y + +  + +L   +DL   L   + +GFSA+T  +   E H + SWSF ++
Sbjct: 173 SLLVASLVYPS-QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASN 231

Query: 254 GFRP 257
               
Sbjct: 232 LPHA 235

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score =  171 bits (433), Expect = 2e-49
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 18/244 (7%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTREL--GVPASSSGSLIYNNPVPFFD 76
           S+ ++F   +F  N  ++   G+ S    GV+ LT+         S G  +Y  PV  + 
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSSQLT-K 133
             T + ASF++ F+F +   NP    DGLAF+++P +  +  GS    LGL N+S     
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSS 120

Query: 134 NKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDY 191
           N+ VA+EFDT     +D  DP+  HIG+D++ +ESIKT        D  +G V  A I Y
Sbjct: 121 NQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQW-----DWINGGVAFATITY 175

Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST--EGSTELHMIQSWS 249
               + L   + Y +    T  +  ++DL   L   + VGFSA+T      E H + SWS
Sbjct: 176 LAPNKTLIASLVYPS-NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS 234

Query: 250 FQTS 253
           F ++
Sbjct: 235 FTST 238

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score =  171 bits (433), Expect = 3e-49
 Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 23/242 (9%)

Query: 26  NFDFTSF--NLRNITLLGD-SYLRNGVIGLTREL--GVPASSSGSLIYNNPVPFFDQETN 80
           +F+F  F  N   + L  D     N V+ LT+ +      +S+G  +Y  PV  +D  T 
Sbjct: 5   SFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG 64

Query: 81  TTASFTSRFSFSINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
             ASF +RFSFSI    P     DGL FFI+P N   G  GG  G+ N    +   FVA+
Sbjct: 65  NVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL--SPYPFVAV 122

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDT  +    DP   HIG+D++S+ S KT         L +G +    I Y    ++L 
Sbjct: 123 EFDTFRNT--WDPQIPHIGIDVNSVISTKTVP-----FTLDNGGIANVVIKYDASTKILH 175

Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-------EGSTELHMIQSWSFQT 252
           V + + +       +   +DL   L  ++ VGFSA+T         +TE H I SWSF  
Sbjct: 176 VVLVFPS-LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFSA 234

Query: 253 SG 254
           S 
Sbjct: 235 SL 236

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score =  170 bits (431), Expect = 5e-49
 Identities = 75/242 (30%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 22  SNNMNFDFTSFNL--RNITLLGD-SYLRNGVIGLTRE--LGVPASSSGSLIYNNPVPFFD 76
           + + +F FT+FN    N+ L  D      G + LT          S G  +Y  P+   D
Sbjct: 1   TESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGL-VNSSQLTKNK 135
             T   ASFT+ FSF +     ++  DGLAFF++P +    + GG LGL  + +     +
Sbjct: 61  NTTL--ASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQ 118

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +    DP+  HIG+D + +ES KT        D+  G      I Y+   
Sbjct: 119 TVAVEFDTYSNA--WDPNYTHIGIDTNGIESKKTTP-----FDMVYGEKANIVITYQAST 171

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + L   + +      +  +   +DL   L   + VGFSA+T    G  E H I SWSF  
Sbjct: 172 KALAASLVFPV-SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAV 230

Query: 253 SG 254
           S 
Sbjct: 231 SL 232

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score =  169 bits (428), Expect = 2e-48
 Identities = 73/242 (30%), Positives = 119/242 (49%), Gaps = 17/242 (7%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELGVP---ASSSGSLIYNNPVPFF 75
           +N++ F FT F    +++   GD S   N  + LT+          S G  +Y  P+  +
Sbjct: 1   ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLW 60

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILG-SAGGCLGLVNSSQL--T 132
              ++  ASF + F+FSI+  + +       F  SPD +I   S G  LGL  SS    +
Sbjct: 61  QS-SSLVASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGS 119

Query: 133 KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
            N  V++EFDT  +    DP+  HIG+D++S+ S   +       D ++G   TA I Y 
Sbjct: 120 DNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASK-----WDWQNGKTATAHISYN 174

Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT 252
           +  + L V  SY N  P   ++  +++L+      + VGFSA+T   T+ + I +WSF++
Sbjct: 175 SASKRLSVVSSYPNSSP--VVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS 232

Query: 253 SG 254
           S 
Sbjct: 233 SL 234

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  169 bits (431), Expect = 2e-48
 Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 52/284 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-----EGKTEFLAELSIIACLRHKNLVQ 408
            I+G G FG VY+A++   G   AVK ++H       +       E  + A L+H N++ 
Sbjct: 13  EIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G C ++  L LV E+   G L+R+L         +     +N  V +A  + YLH E 
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-----IPPDILVNWAVQIARGMNYLHDEA 125

Query: 469 EQQVIHRDIKASNIMLDANFN----------------ARLESSFTLT--AGTMGYLAPEY 510
              +IHRD+K+SNI++                     AR     T    AG   ++APE 
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---IIEA 567
           ++    ++ +DV+SYGV++ E+  G  P        + ++ +   +G+        I   
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP-------FRGIDGLAVAYGVAMNKLALPIPST 238

Query: 568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             +            +L+     C NPD  +RPS   +   L  
Sbjct: 239 CPE---------PFAKLM---EDCWNPDPHSRPSFTNILDQLTT 270

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score =  168 bits (427), Expect = 2e-48
 Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 17/244 (6%)

Query: 21  LSNNMNFDFTSF--NLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQ 77
           LS++++F+F  F  N +NI   GD+ +   GV+ +T+      +S G  +Y  P+  +D 
Sbjct: 2   LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDS 61

Query: 78  ETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSSQ-LTKN 134
            T   ASF + FSF +   + S   DGLAFF++P N  +  GS+ G  GL +SS   + N
Sbjct: 62  ITGKVASFATSFSFVVKA-DKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSN 120

Query: 135 KFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYK 192
           + +A+EFDT     ++  DPD  HIG+D++S++SIKT        D ++G V    I Y+
Sbjct: 121 QIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKW-----DWRNGEVADVVITYR 175

Query: 193 NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWSF 250
              + L V +SY +    + ++  ++DL   L   + VGFS     +   E H + SW F
Sbjct: 176 APTKSLTVCLSYPS-DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234

Query: 251 QTSG 254
            ++ 
Sbjct: 235 TSNL 238

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  168 bits (426), Expect = 5e-47
 Identities = 63/333 (18%), Positives = 121/333 (36%), Gaps = 59/333 (17%)

Query: 337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELS 396
           E +  E            ++GRG +G VYK          AVK    ++     F+ E +
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKN 57

Query: 397 I--IACLRHKNLVQLLGWCAE-----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           I  +  + H N+ + +          + E LLV EY PNGSL + L   +       W  
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-----SDWVS 112

Query: 450 RLNIVVGLASALTYLHQECEQ------QVIHRDIKASNIMLDANFN--------ARLESS 495
              +   +   L YLH E  +       + HRD+ + N+++  +          +   + 
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172

Query: 496 FTLT------------AGTMGYLAPEYLQ-------YGTATEKTDVFSYGVVVLEVACGR 536
             L              GT+ Y+APE L+         +A ++ D+++ G++  E+   R
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-R 231

Query: 537 RPIERETEGHKMVNLV--DWVWGL--YAEGRIIEAADKR---LNGAFNEDEMKRLLLVGL 589
                  E      +     V     + + +++ + +K+      A+ E+ +    L   
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKET 291

Query: 590 --SCANPDSSARPSMRRVFQILNNEAEPLVVPK 620
              C + D+ AR + +   + +          K
Sbjct: 292 IEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score =  164 bits (416), Expect = 7e-47
 Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 22/241 (9%)

Query: 26  NFDFTSF--NLRNITLLGD-SYLRNGVIGLTR---ELGVPASSSGSLIYNNPVPFFDQET 79
           +F+F  F  N + + L    S   NGV+ LT+          S+G  +Y  P+  +D  T
Sbjct: 4   SFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTT 63

Query: 80  NTTASFTSRFSFSINNVNPSSF-GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVA 138
              ASF +RFSF+I          DGL FF+ P N   G  GG LG+        +   A
Sbjct: 64  GNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPP--EGDNAFA 121

Query: 139 IEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRML 198
           +EFDT  +    DP   HIG+D++S+ S KT         L++G V    I Y +  ++L
Sbjct: 122 VEFDTFQNT--WDPQVPHIGIDVNSIVSSKTLH-----FQLENGGVANVVIKYDSPTKIL 174

Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGN--MYVGFSAST---EGSTELHMIQSWSFQTS 253
            V +++ +       L   +DL      +  + VG SA+T   + + E H I SWSF +S
Sbjct: 175 NVVLAFHS-VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSS 233

Query: 254 G 254
            
Sbjct: 234 L 234

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  166 bits (422), Expect = 1e-46
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGW 412
            +LG+G FG   K     +G V  +K       E +  FL E+ ++ CL H N+++ +G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +   L  + EY+  G+L  ++           W  R++    +AS + YLH      +
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHS---MNI 129

Query: 473 IHRDIKASNIMLDANFN--------ARLES------------------SFTLTAGTMGYL 506
           IHRD+ + N ++  N N        ARL                          G   ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           APE +   +  EK DVFS+G+V+ E+      
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  165 bits (419), Expect = 1e-46
 Identities = 59/285 (20%), Positives = 113/285 (39%), Gaps = 50/285 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--------EGKTEFLAELSIIACLRHKN 405
           + +G+G FG V+K       SV A+K              E   EF  E+ I++ L H N
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V+L G         +V E++P G L   L         + W  +L +++ +A  + Y+ 
Sbjct: 85  IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQ 139

Query: 466 QECEQQVIHRDIKASNIMLDANFN-------------ARLES-SFTLTAGTMGYLAPEYL 511
                 ++HRD+++ NI L +                ++    S +   G   ++APE +
Sbjct: 140 N-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198

Query: 512 QY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---IIE 566
                + TEK D +S+ +++  +  G  P +  + G      + ++  +  EG    I E
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEGLRPTIPE 253

Query: 567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                         ++ ++     C + D   RP    + + L+ 
Sbjct: 254 DCPP---------RLRNVI---ELCWSGDPKKRPHFSYIVKELSE 286

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  161 bits (410), Expect = 2e-45
 Identities = 51/276 (18%), Positives = 96/276 (34%), Gaps = 42/276 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             L     G ++K  +   G+   VK       S     +F  E   +    H N++ +L
Sbjct: 16  TKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 411 GWCAE--KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           G C         L+  +MP GSL  +L+       ++     +   + +A  + +LH   
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKFALDMARGMAFLHT-L 130

Query: 469 EQQVIHRDIKASNIMLDANFNAR-------LESSFTLTAGTMGYLAPEYLQ---YGTATE 518
           E  +    + + ++M+D +  AR                    ++APE LQ     T   
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRR 190

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---IIEAADKRLNGA 575
             D++S+ V++ E+     P          ++ ++    +  EG    I           
Sbjct: 191 SADMWSFAVLLWELVTREVP-------FADLSNMEIGMKVALEGLRPTIPPGISP----- 238

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                + +L+     C N D + RP    +  IL  
Sbjct: 239 ----HVSKLM---KICMNEDPAKRPKFDMIVPILEK 267

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score =  159 bits (403), Expect = 3e-45
 Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 37/250 (14%)

Query: 22  SNNMNFDFTSFNLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETN 80
           +   +F   +FN  N+ L GD +   NG + L+        S     Y+ P+   D  T 
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTG 57

Query: 81  TTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIE 140
             ASF + F+ +I     ++   GL F + P                    +K   V +E
Sbjct: 58  NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPE----------------SKGDTVTVE 101

Query: 141 FDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKV 200
           FDT L         + I +D+++ +           +    G      I Y +  ++  V
Sbjct: 102 FDTFL---------SRISIDVNNNDIKSVP----WDVHDYDGQNAEVRITYNSSTKVFSV 148

Query: 201 FMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTSGFRP 257
            +S  +    +  +   ++L   +   + VGFSA++   + S E H + SWSF +     
Sbjct: 149 SLSNPS-TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSKFINL 207

Query: 258 VRPKLHPHNV 267
              K    N+
Sbjct: 208 KDQKSERSNI 217

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score =  157 bits (399), Expect = 4e-45
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 12/189 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQET 79
           +   +F  T F  + +N+   GD Y     + LT+ +    ++ G  +Y++P+  +D+ET
Sbjct: 1   TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRET 57

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTK-NKFVA 138
              A+F + F+F IN  N  +  DG  FFI+P +    + GG LG+ NS++  K  + VA
Sbjct: 58  GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVA 117

Query: 139 IEFDTRLDPHFDDPDE-NHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           +EFDT  +  +D  +   HIG+D++S++S+ T         L++G      I +     +
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKS-----WKLQNGEEANVVIAFNAATNV 172

Query: 198 LKVFMSYSN 206
           L V ++Y N
Sbjct: 173 LTVSLTYPN 181

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score =  156 bits (395), Expect = 7e-44
 Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 24/242 (9%)

Query: 22  SNNMNFDFTSFNLR-NITLLGD-SYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFD 76
           +   +F+F +F+    + L G+ +    G + LT           S G   Y++P+   D
Sbjct: 1   ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN-K 135
             +N  ASF + F+F I   N S    GLAF + P N         LG+ N++    N +
Sbjct: 61  --SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNAR 118

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+ F+T          +N I  D + ++     +         +G      I Y +  
Sbjct: 119 TVAVVFNTF---------KNRIDFDKNFIKPYVNENC---DFHKYNGEKTDVQITYDSSN 166

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
             L+VF+ ++    V   +   + L   +   + VGFS ++   E +TE H + SWSF +
Sbjct: 167 NDLRVFLHFTV-SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSS 225

Query: 253 SG 254
             
Sbjct: 226 KF 227

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  152 bits (386), Expect = 7e-42
 Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 42/278 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G G+FG VYK  +   G VA VK    +  + +    F  E+ ++   RH N++  +
Sbjct: 30  QRIGSGSFGTVYKGKW--HGDVA-VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G+     +L +V ++    SL   L+    +         ++I    A  + YLH    +
Sbjct: 87  GYS-TAPQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHA---K 139

Query: 471 QVIHRDIKASNIMLDANFN--------ARLE------SSFTLTAGTMGYLAPEYLQYGTA 516
            +IHRD+K++NI L  +          A  +        F   +G++ ++APE ++   +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199

Query: 517 ---TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN 573
              + ++DV+++G+V+ E+  G+ P         + N    +  +       + +  R N
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYS------NINNRDQIIEMVGRGSLSPDLSKVRSN 253

Query: 574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                  MKRL+     C       RPS  R+   +  
Sbjct: 254 ---CPKRMKRLM---AECLKKKRDERPSFPRILAEIEE 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  150 bits (380), Expect = 1e-40
 Identities = 51/288 (17%), Positives = 105/288 (36%), Gaps = 57/288 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
            ++G+G FG VY   +   G VA ++     + + +    F  E+      RH+N+V  +
Sbjct: 39  ELIGKGRFGQVYHGRW--HGEVA-IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           G C     L ++       +L  ++    +  ++L       I   +   + YLH    +
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVR---DAKIVLDVNKTRQIAQEIVKGMGYLHA---K 149

Query: 471 QVIHRDIKASNIMLD----------------ANFNARLESSFTLTAGTMGYLAPEYLQYG 514
            ++H+D+K+ N+  D                     R E    +  G + +LAPE ++  
Sbjct: 150 GILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209

Query: 515 TA---------TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR-- 563
           +          ++ +DVF+ G +  E+     P        K       +W +    +  
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWP-------FKTQPAEAIIWQMGTGMKPN 262

Query: 564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + +             E+  +L   L C   +   RP+  ++  +L  
Sbjct: 263 LSQIG--------MGKEISDIL---LFCWAFEQEERPTFTKLMDMLEK 299

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  143 bits (363), Expect = 1e-38
 Identities = 64/295 (21%), Positives = 110/295 (37%), Gaps = 46/295 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             +G+G +G V++  +   G   AVK      E       EL     LRH+N++  +   
Sbjct: 14  ECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71

Query: 414 ----AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                   +L L+  Y   GSL   L   +     L     L IV+ +AS L +LH E  
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 126

Query: 470 QQ-----VIHRDIKASNIMLDANFN--------ARLESS--------FTLTAGTMGYLAP 508
                  + HRD+K+ NI++  N          A + S              GT  Y+AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186

Query: 509 E------YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG 562
           E       +    + ++ D++++G+V+ EVA          +        D V    +  
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED--YKPPFYDVVPNDPSFE 244

Query: 563 RIIEA-ADKRL-----NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            + +     +      N  F++  +  L  +   C   + SAR +  R+ + L  
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  143 bits (362), Expect = 4e-38
 Identities = 62/294 (21%), Positives = 119/294 (40%), Gaps = 46/294 (15%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
            +G+G FG V++  +   G   AVK      E      AE+     LRH+N++  +    
Sbjct: 49  SIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADN 106

Query: 415 EKG----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
           +      +L LV +Y  +GSL   L + +     ++    + + +  AS L +LH E   
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVG 161

Query: 471 Q-----VIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGYLAPE 509
                 + HRD+K+ NI++  N          A    S T T         GT  Y+APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221

Query: 510 YL------QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR 563
            L      ++  + ++ D+++ G+V  E+A          +        D V    +   
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP--YYDLVPSDPSVEE 279

Query: 564 IIEA-ADKRL-----NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + +   +++L     N   + + ++ +  +   C   + +AR +  R+ + L+ 
Sbjct: 280 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  143 bits (362), Expect = 1e-37
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 32/221 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
             +GRG FG V+     +  ++ AVK  R     + K +FL E  I+    H N+V+L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C +K  + +V E +  G     L      G  L     L +V   A+ + YL     + 
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE---SKC 233

Query: 472 VIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTMGY----LAPEYLQYGTAT 517
            IHRD+ A N ++             +R   +  +  + G         APE L YG  +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293

Query: 518 EKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            ++DV+S+G+++ E    G  P          E   +G ++
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  141 bits (357), Expect = 1e-37
 Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 33/271 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           + +GRG F  VY+A     G   A+K+         + + + + E+ ++  L H N+++ 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                E  EL +V E    G L RM+    +   L+         V L SAL ++H    
Sbjct: 98  YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---S 154

Query: 470 QQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYGTAT 517
           ++V+HRDIK +N+ + A    +L           +++   +  GT  Y++PE +      
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
            K+D++S G ++ E+A  + P   +     + +L           +I +     L     
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCK---------KIEQCDYPPLPSDHY 263

Query: 578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
            +E+++L+     C NPD   RP +  V+ +
Sbjct: 264 SEELRQLV---NMCINPDPEKRPDVTYVYDV 291

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  141 bits (358), Expect = 2e-37
 Identities = 62/295 (21%), Positives = 114/295 (38%), Gaps = 46/295 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G+G +G V+   +   G   AVK    + E       E+     +RH+N++  +   
Sbjct: 43  KQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAAD 100

Query: 414 ----AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                   +L L+ +Y  NGSL   L   +     L     L +     S L +LH E  
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIF 155

Query: 470 QQ-----VIHRDIKASNIMLDANFN--------ARLESSFTLT--------AGTMGYLAP 508
                  + HRD+K+ NI++  N          A    S T           GT  Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215

Query: 509 E------YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG 562
           E         +  +    D++S+G+++ EVA  R       E +++    D V    +  
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVAR-RCVSGGIVEEYQLP-YHDLVPSDPSYE 273

Query: 563 RIIEA-ADKRL-----NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            + E    K+L     N   +++ ++++  +   C   + ++R +  RV + L  
Sbjct: 274 DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  144 bits (364), Expect = 4e-37
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 28/218 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +    ++ E+M  G+L   L     N   +S    L +   ++SA+ YL    ++  I
Sbjct: 286 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 340

Query: 474 HRDIKASNIMLD-------ANFN-ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HR++ A N ++        A+F  +RL +  T TA           APE L Y   + K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+++GV++ E+A  G  P          E   + ++M
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  140 bits (355), Expect = 6e-37
 Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 43/288 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G G+FG          G    +K    S+ S + + E   E++++A ++H N+VQ  
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               E G L +V +Y   G L + +    + GVL      L+  V +  AL ++H   ++
Sbjct: 90  ESFEENGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVH---DR 144

Query: 471 QVIHRDIKASNIMLDANFNARL-----------ESSFTLTA-GTMGYLAPEYLQYGTATE 518
           +++HRDIK+ NI L  +   +L                    GT  YL+PE  +      
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE 578
           K+D+++ G V+ E+   +       E   M NLV          +II  +   ++  ++ 
Sbjct: 205 KSDIWALGCVLYELCTLKHAF----EAGSMKNLVL---------KIISGSFPPVSLHYSY 251

Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLT 626
            +++ L+         +   RPS   V  IL       +  +++  L+
Sbjct: 252 -DLRSLV---SQLFKRNPRDRPS---VNSILEK---GFIAKRIEKFLS 289

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  138 bits (349), Expect = 8e-37
 Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 42/288 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             +G G++G   K    S G +   K       +   K   ++E++++  L+H N+V+  
Sbjct: 12  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71

Query: 411 GWCAEK--GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ-- 466
               ++    L +V EY   G L  ++ + ++    L     L ++  L  AL   H+  
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQYG 514
           +    V+HRD+K +N+ LD   N +L           ++SF  T  GT  Y++PE +   
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
           +  EK+D++S G ++ E+     P            L           +I E   +R+  
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPF----TAFSQKELAG---------KIREGKFRRIPY 238

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLK 622
            +++ E+  ++       N     RPS   V +IL N   PL++    
Sbjct: 239 RYSD-ELNEII---TRMLNLKDYHRPS---VEEILEN---PLILEHHH 276

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  133 bits (337), Expect = 2e-35
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            E+  + LV E+M +G L   L        L +    L + + +   + YL    E  VI
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYL---EEACVI 126

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD+ A N ++  N           R       T+ T         +PE   +   + K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+S+GV++ EV   G+ P         +E  + G ++
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 224

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  133 bits (338), Expect = 2e-35
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 28/218 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG G +G VY+  +       AVK  K       EFL E +++  ++H NLVQLLG C
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +    ++ E+M  G+L   L     N   +S    L +   ++SA+ YL    ++  I
Sbjct: 79  TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 133

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD+ A N ++  N          +RL +  T TA           APE L Y   + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+++GV++ E+A  G  P          E   + ++M
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  133 bits (336), Expect = 4e-35
 Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + LG G FG V    +     VA VK  K     + EF  E   +  L H  LV+  G C
Sbjct: 14  KELGSGQFGVVKLGKWKGQYDVA-VKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
           +++  + +V EY+ NG L   L     +G  L     L +   +   + +L      Q I
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFI 126

Query: 474 HRDIKASNIMLDANFN--------ARL--ESSFTLTAGTM---GYLAPEYLQYGTATEKT 520
           HRD+ A N ++D +           R   +  +  + GT     + APE   Y   + K+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+++G+++ EV   G+ P         + + ++GH++
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRL 224

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  132 bits (335), Expect = 7e-35
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  + ++ EYM NG L   L    E          L +   +  A+ YL     +Q +
Sbjct: 89  TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142

Query: 474 HRDIKASNIMLDANFN--------ARL--ESSFTLTAGTM---GYLAPEYLQYGTATEKT 520
           HRD+ A N +++            +R   +  +T + G+     +  PE L Y   + K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           D++++GV++ E+   G+ P          E   +G ++
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  131 bits (333), Expect = 1e-34
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG G FG V+  Y+     VA VK  K        FLAE +++  L+H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  + ++ EYM NGSL   L   + +G+ L+    L++   +A  + ++    E+  I
Sbjct: 78  TQEP-IYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD++A+NI++    +        ARL      TA           APE + YGT T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+S+G+++ E+   GR P         I+    G++M
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  132 bits (333), Expect = 2e-34
 Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 32/228 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           + LG G F  V        G   A+KR   H  + + E   E  +     H N+++L+ +
Sbjct: 35  QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94

Query: 413 CAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           C      K E  L+  +   G+L   + +  + G  L+    L +++G+   L  +H   
Sbjct: 95  CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152

Query: 469 EQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTA--------GTMGYLA 507
            +   HRD+K +NI+L       L             E S              T+ Y A
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211

Query: 508 PEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV 552
           PE      +    E+TDV+S G V+  +  G  P +   +    V L 
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  131 bits (332), Expect = 3e-34
 Identities = 67/280 (23%), Positives = 97/280 (34%), Gaps = 51/280 (18%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-RHKN 405
           F     LG G++G V+K      G + AVKRS     G  +    LAE+     + +H  
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     E G L L  E     SL +        G  L        +     AL +LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAHLH 174

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTA-GTMGYLAPEYLQYG 514
               Q ++H D+K +NI L      +L           +       G   Y+APE LQ G
Sbjct: 175 ---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ-G 230

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
           +     DVFS G+ +LEVAC            ++                       L  
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ-------------------GYLPP 271

Query: 575 AFNE---DEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            F      E++ +L   +    PD   R +      +L  
Sbjct: 272 EFTAGLSSELRSVL---VMMLEPDPKLRATAE---ALLAL 305

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  134 bits (339), Expect = 4e-34
 Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
           +E+  + +V EYM  GSL   L    E G  L     +++   +AS + Y+        +
Sbjct: 249 SEEP-IYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD++A+NI++  N          ARL      TA           APE   YG  T K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+S+G+++ E+   GR P         +++   G++M
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  131 bits (332), Expect = 4e-34
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 28/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G       A+K  R   S +   E L E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + YL   
Sbjct: 81  RLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLE-- 134

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTM---GYLAPEYLQY 513
            +++++HRD+ A N+++    +        A+L   E       G      ++A E + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRP 538
              T ++DV+SYGV V E+   G +P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  135 bits (342), Expect = 5e-34
 Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
           +E+  + +V EYM  GSL   L    E G  L     +++   +AS + Y+        +
Sbjct: 332 SEEP-IYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD++A+NI++  N          ARL      TA           APE   YG  T K+
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+S+G+++ E+   GR P         +++   G++M
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  130 bits (329), Expect = 5e-34
 Identities = 63/305 (20%), Positives = 108/305 (35%), Gaps = 61/305 (20%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACL-RHKN 405
           FH    +G G FG+V+K      G + A+KRSK    G  +    L E+   A L +H +
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +V+     AE   +L+  EY   GSL   + ++             ++++ +   L Y+H
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------------------- 500
                 ++H DIK SNI +         S                               
Sbjct: 133 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189

Query: 501 --GTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG 557
             G   +LA E LQ       K D+F+  + V+  A          + H++         
Sbjct: 190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ------- 242

Query: 558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV 617
               GR+      R+    ++ E   LL       +PD   RPS      ++ +    ++
Sbjct: 243 ----GRL-----PRIPQVLSQ-EFTELL---KVMIHPDPERRPS---AMALVKH---SVL 283

Query: 618 VPKLK 622
           +   +
Sbjct: 284 LSASR 288

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  132 bits (335), Expect = 1e-33
 Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 30/218 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + LG G FG V+ A +     VA VK  K        FLAE +++  L+H  LV+L    
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  + ++ E+M  GSL    +  S+ G        ++    +A  + ++    ++  I
Sbjct: 253 TKEP-IYIITEFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYI 306

Query: 474 HRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGTATEKT 520
           HRD++A+NI++ A+          AR+      TA           APE + +G+ T K+
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366

Query: 521 DVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           DV+S+G++++E+   GR P         I     G++M
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 404

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  130 bits (328), Expect = 2e-33
 Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 43/234 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSV--AAVKRSK--HSHEGKTEFLAELSIIACL-RHKNLVQ 408
            ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H N++ 
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRML------------YQDSENGVLLSWYHRLNIVVG 456
           LLG C  +G L L  EY P+G+L   L               +     LS    L+    
Sbjct: 91  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-------AGTMGYL--- 506
           +A  + YL    ++Q IHRD+ A NI++  N+ A++ + F L+         TMG L   
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKI-ADFGLSRGQEVYVKKTMGRLPVR 206

Query: 507 --APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
             A E L Y   T  +DV+SYGV++ E+   G  P          E+  +G+++
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 260

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  126 bits (320), Expect = 6e-33
 Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 30/216 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 27  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVI 83

Query: 414 -AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL   L   S    +L     L   + +  A+ YL        
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 138

Query: 473 IHRDIKASNIMLDANFNARLESSFTL-----TAGTMGYL-----APEYLQYGTATEKTDV 522
           +HRD+ A N+++  +  A++ S F L     +    G L     APE L+    + K+DV
Sbjct: 139 VHRDLAARNVLVSEDNVAKV-SDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197

Query: 523 FSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           +S+G+++ E+   GR P         + R  +G+KM
Sbjct: 198 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  126 bits (318), Expect = 1e-32
 Identities = 55/238 (23%), Positives = 91/238 (38%), Gaps = 46/238 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
             LG   FG VYK +             A+K  + K     + EF  E  + A L+H N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRML------------YQDSENGVLLSWYHRLNIV 454
           V LLG   +   L +++ Y  +G L   L              D      L     +++V
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGTMGY 505
             +A+ + YL       V+H+D+   N+++    N         R + ++          
Sbjct: 135 AQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191

Query: 506 L-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           L     APE + YG  +  +D++SYGVV+ EV   G +P         +E       +
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 249

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  127 bits (320), Expect = 2e-32
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 27/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           +I+G G  G V        G      A+K  ++ ++   + +FL+E SI+    H N+++
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G        ++V EYM NGSLD  L          +    + ++ G+ + + YL    
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLS--- 168

Query: 469 EQQVIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTMGYL-----APEYLQY 513
           +   +HRD+ A N+++D+N          +R+  +        T G +     APE + +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRP 538
            T +  +DV+S+GVV+ EV   G RP
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERP 254

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  125 bits (317), Expect = 2e-32
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 35/223 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  ++  S   + +FL E   +    H ++V+
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L+G   E   + ++ E    G L   L         L     +     L++AL YL    
Sbjct: 81  LIGVITEN-PVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE--- 133

Query: 469 EQQVIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTM---GYLAPEYLQYGT 515
            ++ +HRDI A N+++ +N          +R   +S++   +       ++APE + +  
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193

Query: 516 ATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            T  +DV+ +GV + E+   G +P         I R   G ++
Sbjct: 194 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 236

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  127 bits (320), Expect = 2e-32
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 28/207 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           +++G G FG VYK    +S        A+K  ++ ++ + + +FL E  I+    H N++
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +L G  ++   ++++ EYM NG+LD+ L    E     S    + ++ G+A+ + YL   
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLA-- 164

Query: 468 CEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGTMG------YLAPEYLQ 512
                +HRD+ A NI++++N          +R LE     T  T G      + APE + 
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223

Query: 513 YGTATEKTDVFSYGVVVLEVA-CGRRP 538
           Y   T  +DV+S+G+V+ EV   G RP
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERP 250

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  125 bits (317), Expect = 2e-32
 Identities = 58/267 (21%), Positives = 97/267 (36%), Gaps = 39/267 (14%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           +  +GRG+F  VYK     +    A       K +   +  F  E  ++  L+H N+V+ 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 410 LG----WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                     K  ++LV E M +G+L   L       V +      +    +   L +LH
Sbjct: 91  YDSWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKV-MKIKVLRSWCRQILKGLQFLH 146

Query: 466 QECEQQVIHRDIKASNIMLDAN----------FNARLESSFTLT-AGTMGYLAPEYLQYG 514
                 +IHRD+K  NI +                   +SF     GT  ++APE  +  
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK 205

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
              E  DV+++G+ +LE+A    P        ++   V         G    + DK    
Sbjct: 206 -YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV-------TSGVKPASFDKVAI- 256

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPS 601
                E+K ++     C   +   R S
Sbjct: 257 ----PEVKEII---EGCIRQNKDERYS 276

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  129 bits (326), Expect = 2e-32
 Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 30/216 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G+G FG+V    +   G+  AVK  K+       FLAE S++  LRH NLVQLLG  
Sbjct: 199 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQLLGVI 255

Query: 414 -AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             EKG L +V EYM  GSL    Y  S    +L     L   + +  A+ YL        
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVD--YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 310

Query: 473 IHRDIKASNIMLDANFNARLESSFTL-----TAGTMGYL-----APEYLQYGTATEKTDV 522
           +HRD+ A N+++  +  A++ S F L     +    G L     APE L+    + K+DV
Sbjct: 311 VHRDLAARNVLVSEDNVAKV-SDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369

Query: 523 FSYGVVVLEVA-CGRRP---------IERETEGHKM 548
           +S+G+++ E+   GR P         + R  +G+KM
Sbjct: 370 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  125 bits (316), Expect = 2e-32
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 26/204 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           RILG G FG VY+  + +        AVK  +   + + K +F++E  I+  L H ++V+
Sbjct: 18  RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L+G   E+    ++ E  P G L   L     N   L     +   + +  A+ YL    
Sbjct: 78  LIGII-EEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE--- 130

Query: 469 EQQVIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTM---GYLAPEYLQYGT 515
               +HRDI   NI++ +           +R   +  +   + T     +++PE + +  
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190

Query: 516 ATEKTDVFSYGVVVLEVA-CGRRP 538
            T  +DV+ + V + E+   G++P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  126 bits (318), Expect = 3e-32
 Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 28/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG G FG V+K  +   G        +K    K   +        +  I  L H ++V
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C     L LV +Y+P GSL   + Q       L     LN  V +A  + YL   
Sbjct: 79  RLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGA---LGPQLLLNWGVQIAKGMYYLE-- 132

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTM---GYLAPEYLQY 513
            E  ++HR++ A N++L +           A L   +    L +       ++A E + +
Sbjct: 133 -EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRP 538
           G  T ++DV+SYGV V E+   G  P
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP 217

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  126 bits (319), Expect = 3e-32
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 28/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++LG GAFG VYK  +   G       A+K  R   S +   E L E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +LLG C     + L+ + MP G L   + +  +N   +   + LN  V +A  + YL   
Sbjct: 81  RLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLE-- 134

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTM---GYLAPEYLQY 513
            +++++HRD+ A N+++    +        A+L   E       G      ++A E + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRP 538
              T ++DV+SYGV V E+   G +P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  126 bits (318), Expect = 3e-32
 Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 42/234 (17%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVA-----AVK--RSKHSHEGKTEFLAELSIIACLRHKN 405
           +R LG+G+FG VY+               A+K      S   + EFL E S++      +
Sbjct: 30  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLD------RMLYQDSENGVLLSWYHRLNIVVGLAS 459
           +V+LLG  ++    L++ E M  G L       R    ++      S    + +   +A 
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMGYL--- 506
            + YL+     + +HRD+ A N M+  +F  ++   F +T           G  G L   
Sbjct: 150 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKI-GDFGMTRDIYETDYYRKGGKGLLPVR 205

Query: 507 --APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
             +PE L+ G  T  +DV+S+GVV+ E+A    +P         +    EG  +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 259

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  125 bits (316), Expect = 3e-32
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
            ++GRG FG VY      +       AVK           ++FL E  I+    H N++ 
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 409 LLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           LLG C   +G  L+V  YM +G L   +  ++ N    +    +   + +A  + YL   
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN---PTVKDLIGFGLQVAKGMKYLA-- 145

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTMGYL-----APEYL 511
             ++ +HRD+ A N MLD  F         AR    +  +++   T   L     A E L
Sbjct: 146 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204

Query: 512 QYGTATEKTDVFSYGVVVLEVAC-GRRP 538
           Q    T K+DV+S+GV++ E+   G  P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPP 232

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  125 bits (317), Expect = 4e-32
 Identities = 62/232 (26%), Positives = 90/232 (38%), Gaps = 40/232 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +   +       AVK      S + + +FL E  II+   H+N+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L    R           L+    L++   +A    Y
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155

Query: 464 LHQECEQQVIHRDIKASNIMLDANFN-----------AR-LESSFTLTAGTMGYL----- 506
           L    E   IHRDI A N +L                AR +  +     G    L     
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            PE    G  T KTD +S+GV++ E+   G  P         +E  T G +M
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  124 bits (314), Expect = 6e-32
 Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)

Query: 351 HSNRILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKN 405
           HS+R++G+G FG VY   +          A+K        +    FL E  ++  L H N
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 406 LVQLLGWC-AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           ++ L+G     +G   ++  YM +G L + +     N    +    ++  + +A  + YL
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN---PTVKDLISFGLQVARGMEYL 140

Query: 465 HQECEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTMGYL-----AP 508
               EQ+ +HRD+ A N MLD +F         AR       +++       L     A 
Sbjct: 141 A---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVA-CGRRP 538
           E LQ    T K+DV+S+GV++ E+   G  P
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  126 bits (318), Expect = 8e-32
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           +++G G FG V               A+K  +  ++ + + +FL E SI+    H N+++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L G   +   +++V EYM NGSLD  L    ++    +    + ++ G+AS + YL    
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLS--- 164

Query: 469 EQQVIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTMGYL-----APEYLQY 513
           +   +HRD+ A NI++++N           R+  +          G +     +PE + Y
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224

Query: 514 GTATEKTDVFSYGVVVLEVA-CGRRP 538
              T  +DV+SYG+V+ EV   G RP
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP 250

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score =  119 bits (298), Expect = 8e-32
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+EFDT L+P + DP+  HIG+D++S+ S  TA       D ++G + TA I Y +
Sbjct: 1   SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKW-----DWQNGKIATAHISYNS 55

Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
             + L V   Y+  KP    L  +I+L   L   + VG SAST    E + + SWSF +S
Sbjct: 56  VSKRLSVTSYYAGSKP--ATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSS 113

Query: 254 GFRPVRPKLHPHNVSDSSVV 273
            +  V  K + +      V+
Sbjct: 114 LWTNVAKKENENKYITRGVL 133

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  124 bits (313), Expect = 1e-31
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 31/214 (14%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVA---AVKRSK---HSHEGKTEFLAELSIIACLRHKNL 406
            +ILG G FG+V +         +   AVK  K    S     EFL+E + +    H N+
Sbjct: 39  GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98

Query: 407 VQLLGWCAEKG-----ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLAS 459
           ++LLG C E       + +++  +M  G L   L   +       +     L  +V +A 
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGTMGYL---- 506
            + YL     +  +HRD+ A N ML  +          ++ + S      G +  +    
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215

Query: 507 -APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP 538
            A E L     T K+DV+++GV + E+A  G  P
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  123 bits (312), Expect = 1e-31
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 37/232 (15%)

Query: 329 ADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEG 387
            D      E+ Y    +  R      +LG+G +G VY     S+    A+K   +     
Sbjct: 8   GDCESDLLEYDYEYDENGDR-----VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY 62

Query: 388 KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRML------YQDSEN 441
                 E+++   L+HKN+VQ LG  +E G + +  E +P GSL  +L       +D+E 
Sbjct: 63  SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ 122

Query: 442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD--------ANFNA--R 491
              + +Y +  I+ GL     YLH   + Q++HRDIK  N++++        ++F    R
Sbjct: 123 --TIGFYTK-QILEGLK----YLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172

Query: 492 LESSFTLT---AGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRP 538
           L      T    GT+ Y+APE +  G     +  D++S G  ++E+A G+ P
Sbjct: 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  125 bits (316), Expect = 1e-31
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
            ++GRG FG VY      +       AVK           ++FL E  I+    H N++ 
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 409 LLGWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           LLG C       L+V  YM +G L   +  ++ N    +    +   + +A  + +L   
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN---PTVKDLIGFGLQVAKGMKFLA-- 209

Query: 468 CEQQVIHRDIKASNIMLDANFN--------ARL---ESSFTLTAGTMGYL-----APEYL 511
             ++ +HRD+ A N MLD  F         AR    +   ++   T   L     A E L
Sbjct: 210 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268

Query: 512 QYGTATEKTDVFSYGVVVLEVAC-GRRP 538
           Q    T K+DV+S+GV++ E+   G  P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPP 296

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  123 bits (311), Expect = 2e-31
 Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 37/239 (15%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGK 388
           P  F  R L+         R LG G FG V    +   G       AVK  + +      
Sbjct: 15  PTHFEKRFLKR-------IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI 67

Query: 389 TEFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLS 446
            +   E+ I+  L H+N+V+  G C E G   + L+ E++P+GSL   L ++      ++
Sbjct: 68  ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---IN 124

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------ARL--ESSF 496
              +L   V +   + YL     +Q +HRD+ A N+++++            +       
Sbjct: 125 LKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181

Query: 497 TLTAGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMV 549
             T            APE L        +DV+S+GV + E+               KM+
Sbjct: 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  123 bits (310), Expect = 2e-31
 Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)

Query: 356 LGRGAFGNVYKAYFASSGSVA--AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG+V +  +         A+K  +         E + E  I+  L +  +V+L+G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C  +  L+LV E    G L + L         +   +   ++  ++  + YL    E+ 
Sbjct: 78  VCQAE-ALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYL---EEKN 130

Query: 472 VIHRDIKASNIMLDANFN--------ARL--ESSFTLTAGTMGYL-----APEYLQYGTA 516
            +HRD+ A N++L             ++         TA + G       APE + +   
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190

Query: 517 TEKTDVFSYGVVVLEVA-CGRRP 538
           + ++DV+SYGV + E    G++P
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKP 213

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  123 bits (311), Expect = 2e-31
 Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 39/239 (16%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA----AVK--RSKHSHEGK 388
           P  F  R L+         R LG G FG V    +  +        AVK  ++    + +
Sbjct: 25  PTVFHKRYLKK-------IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR 77

Query: 389 TEFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLS 446
           + +  E+ I+  L H+++++  G C + G   L LV EY+P GSL   L + S     + 
Sbjct: 78  SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IG 132

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------ARL--ESSF 496
               L     +   + YLH    Q  IHRD+ A N++LD +          A+   E   
Sbjct: 133 LAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189

Query: 497 TLTAGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRPIERETEGHKMV 549
                  G       APE L+       +DV+S+GV + E+           T+  +++
Sbjct: 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  124 bits (313), Expect = 3e-31
 Identities = 62/232 (26%), Positives = 90/232 (38%), Gaps = 40/232 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           R LG GAFG VY+   +   +       AVK      S + + +FL E  II+   H+N+
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLD---RMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           V+ +G   +     ++ E M  G L    R           L+    L++   +A    Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196

Query: 464 LHQECEQQVIHRDIKASNIMLDANFN-----------AR-LESSFTLTAGTMGYL----- 506
           L    E   IHRDI A N +L                AR +  +     G    L     
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            PE    G  T KTD +S+GV++ E+   G  P         +E  T G +M
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 305

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  123 bits (310), Expect = 4e-31
 Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 34/216 (15%)

Query: 353 NRILGRGAFGNVYKAYFASSGS----VA--AVKRSKHSHEGKTEFLAELSIIACLRHKNL 406
            R+LG+G FG+V +A           VA   +K    +     EFL E + +    H ++
Sbjct: 28  GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87

Query: 407 VQLLGWCAEKG------ELLLVYEYMPNGSLDRML--YQDSENGVLLSWYHRLNIVVGLA 458
            +L+G              +++  +M +G L   L   +  EN   L     +  +V +A
Sbjct: 88  AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMGYL-- 506
             + YL     +  IHRD+ A N ML  +    + + F L+           G    L  
Sbjct: 148 CGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV-ADFGLSRKIYSGDYYRQGCASKLPV 203

Query: 507 ---APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP 538
              A E L     T  +DV+++GV + E+   G+ P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  122 bits (308), Expect = 4e-31
 Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVA--AVKRSKH---SHEGKTEFLAELSIIACLRHKNLV 407
           ++ LG G FG V K Y+     V   AVK  K+       K E LAE +++  L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +++G C  +   +LV E    G L++ L Q+      +   + + +V  ++  + YL  E
Sbjct: 82  RMIGICEAES-WMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYL--E 134

Query: 468 CEQQVIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMGYL-----APEYL 511
            E   +HRD+ A N++L     A++ S F L            A T G       APE +
Sbjct: 135 -ESNFVHRDLAARNVLLVTQHYAKI-SDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192

Query: 512 QYGTATEKTDVFSYGVVVLEVA-CGRRP 538
            Y   + K+DV+S+GV++ E    G++P
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  122 bits (307), Expect = 4e-31
 Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 41/230 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-------AVKRSKHSH-EGKTEFLAELSIIACLRHKN 405
             LG+G F  ++K      G           +K    +H      F    S+++ L HK+
Sbjct: 14  ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           LV   G C    E +LV E++  GSLD  L    +N   ++   +L +   LA+A+ +L 
Sbjct: 74  LVLNYGVCVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKLEVAKQLAAAMHFLE 130

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLESS-------FTLT---AGTMGY------LAPE 509
              E  +IH ++ A NI+L    + +  +          ++               + PE
Sbjct: 131 ---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187

Query: 510 YLQYGTA-TEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            ++        TD +S+G  + E+   G +P         ++   + H++
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  122 bits (309), Expect = 5e-31
 Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 36/227 (15%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA----AVKRSKHSH-EGKT 389
           P  F  R L+           LG+G FG+V    +   G       AVK+ +HS  + + 
Sbjct: 17  PTIFEERHLKYI-------SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69

Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L    +V+  G     G   L LV EY+P+G L   L +       L  
Sbjct: 70  DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDA 126

Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------ARL--ESSFT 497
              L     +   + YL     ++ +HRD+ A NI++++  +        A+L       
Sbjct: 127 SRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183

Query: 498 LTAGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP 538
                 G       APE L     + ++DV+S+GVV+ E+     + 
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  121 bits (307), Expect = 6e-31
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 45/237 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVKRSK-HSHEGKTEFLAELSIIACLRHKNLV 407
           R LG GAFG V+ A   +          AVK  K  +   + +F  E  ++  L+H+++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRML------------YQDSENGVLLSWYHRLNIVV 455
           +  G C +   L++V+EYM +G L++ L             Q  +    L     L+I  
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGTMGYL 506
            +AS + YL     Q  +HRD+   N ++ AN          +R + S+     G    L
Sbjct: 141 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197

Query: 507 -----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
                 PE + Y   T ++DV+S+GV++ E+   G++P         IE  T+G  +
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVL 254

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  123 bits (310), Expect = 7e-31
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 18/255 (7%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           LG G  G V+K     SG V A K    +     + + + EL ++       +V   G  
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
              GE+ +  E+M  GSLD++L    + G +        + + +   LTYL ++   +++
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGK-VSIAVIKGLTYLREK--HKIM 154

Query: 474 HRDIKASNIMLDAN---------FNARLESSFTLT-AGTMGYLAPEYLQYGTATEKTDVF 523
           HRD+K SNI++++           + +L  S   +  GT  Y++PE LQ    + ++D++
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 214

Query: 524 SYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKR 583
           S G+ ++E+A GR PI         +     V G  AE         R    F  D    
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP 274

Query: 584 LLLVGLSCANPDSSA 598
           + +  L     +   
Sbjct: 275 MAIFELLDYIVNEPP 289

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  127 bits (320), Expect = 7e-31
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S  + A   A+K  ++  S   + +FL E   +    H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L+G   E   + ++ E    G L   L         L     +     L++AL YL    
Sbjct: 456 LIGVITEN-PVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLE--- 508

Query: 469 EQQVIHRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYL-----APEYLQYGT 515
            ++ +HRDI A N+++ +N          +R     T    + G L     APE + +  
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568

Query: 516 ATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
            T  +DV+ +GV + E+   G +P         I R   G ++
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 611

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  121 bits (305), Expect = 7e-31
 Identities = 57/300 (19%), Positives = 112/300 (37%), Gaps = 63/300 (21%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F    ++G G FG V+KA     G    +KR K+++E   +   E+  +A L H N+V  
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE---KAEREVKALAKLDHVNIVHY 69

Query: 410 LG----------------WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI 453
            G                  ++   L +  E+   G+L++ + +    G  L     L +
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK--RRGEKLDKVLALEL 127

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGT 502
              +   + Y+H    +++I+RD+K SNI L      ++           +   T + GT
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGT 184

Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG 562
           + Y++PE +      ++ D+++ G+++ E+              +               
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT------AFETSKF----------- 227

Query: 563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLK 622
              +  D  ++  F+  + K LL       +     RP+     +IL       V  K  
Sbjct: 228 -FTDLRDGIISDIFD-KKEKTLL---QKLLSKKPEDRPNTS---EILRT---LTVWKKSP 276

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  121 bits (306), Expect = 7e-31
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHSHEGKT- 389
           P +F  R L+         + LG+G FG+V    +     ++G V AVK+ +HS E    
Sbjct: 4   PTQFEERHLKFL-------QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56

Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 57  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 113

Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------ARL--ESSFT 497
              L     +   + YL     ++ IHRD+   NI+++             ++  +    
Sbjct: 114 IKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170

Query: 498 LTAGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEV 532
                 G       APE L     +  +DV+S+GVV+ E+
Sbjct: 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  121 bits (305), Expect = 2e-30
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHSHEG-KT 389
           P +F  R L+         + LG+G FG+V    +     ++G V AVK+ +HS E    
Sbjct: 35  PTQFEERHLKFL-------QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 87

Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSW 447
           +F  E+ I+  L+H N+V+  G C   G   L L+ EY+P GSL   L +  E    +  
Sbjct: 88  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDH 144

Query: 448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------ARL--ESSFT 497
              L     +   + YL     ++ IHRD+   NI+++             ++  +    
Sbjct: 145 IKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201

Query: 498 LTAGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEV 532
                 G       APE L     +  +DV+S+GVV+ E+
Sbjct: 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  121 bits (305), Expect = 2e-30
 Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 35/218 (16%)

Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL 401
           E R           +GRG+FG V++     +G   AVK+ +           EL   A L
Sbjct: 52  EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV----EELVACAGL 107

Query: 402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLA 458
               +V L G   E   + +  E +  GSL +++ Q     E+     +Y     + GL 
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED--RALYYLG-QALEGLE 164

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDAN----------FNARLESSFTLTA-------- 500
               YLH    ++++H D+KA N++L ++              L+      +        
Sbjct: 165 ----YLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217

Query: 501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           GT  ++APE +       K D++S   ++L +  G  P
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  121 bits (305), Expect = 2e-30
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 44/236 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVKRSK-HSHEGKTEFLAELSIIACLRHKNLV 407
             LG GAFG V+ A   +          AVK  K  S   + +F  E  ++  L+H+++V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRML-----------YQDSENGVLLSWYHRLNIVVG 456
           +  G C E   LL+V+EYM +G L+R L             +      L     L +   
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGTMGYL- 506
           +A+ + YL        +HRD+   N ++             +R + S+     G    L 
Sbjct: 167 VAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223

Query: 507 ----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGHKM 548
                PE + Y   T ++DV+S+GVV+ E+   G++P         I+  T+G ++
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  120 bits (303), Expect = 3e-30
 Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 56/247 (22%)

Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           + LG G FG V KA        +  +  AVK  +   S     + L+E +++  + H ++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL--------------------DRMLYQDSENGVLLS 446
           ++L G C++ G LLL+ EY   GSL                          D  +   L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
               ++    ++  + YL    E +++HRD+ A NI++      ++ S F L+       
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKI-SDFGLSRDVYEED 204

Query: 500 ---AGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IER 541
                + G +     A E L     T ++DV+S+GV++ E+   G  P            
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264

Query: 542 ETEGHKM 548
              GH+M
Sbjct: 265 LKTGHRM 271

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  120 bits (304), Expect = 3e-30
 Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 48/239 (20%)

Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           + LG GAFG V +A         +    AVK  +S    + K   ++EL I++ L +H+N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL----------DRMLYQDSENGVLLSWYHRLNIVV 455
           +V LLG C   G +L++ EY   G L                 +      S    L+   
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMGY 505
            +A  + +L     +  IHRD+ A N++L     A++   F L                 
Sbjct: 172 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKI-GDFGLARDIMNDSNYIVKGNAR 227

Query: 506 L-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP----------IERETEGHKM 548
           L     APE +     T ++DV+SYG+++ E+   G  P           +   +G++M
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  118 bits (299), Expect = 6e-30
 Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 40/228 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA---AVKRSK----HSHEGKTEFLAELSIIACLRHKNL 406
             LG G+FG V +  + +        AVK  K       E   +F+ E++ +  L H+NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           ++L G       + +V E  P GSL   L +   +             V +A  + YL  
Sbjct: 84  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLE- 138

Query: 467 ECEQQVIHRDIKASNIMLDAN-------FN-ARL----ESSFTLTAGTM---GYLAPEYL 511
              ++ IHRD+ A N++L          F   R     +  + +         + APE L
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196

Query: 512 QYGTATEKTDVFSYGVVVLEVA-CGRRP---------IER-ETEGHKM 548
           +  T +  +D + +GV + E+   G+ P         + + + EG ++
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  119 bits (300), Expect = 8e-30
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 32/207 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSII-ACLRHKNLVQLLGW 412
           +GRGA+G+V K     SG + AVK  RS    + + + L +L ++        +VQ  G 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTYLHQ 466
              +G+  +  E M + S D+         V       +       I +    AL +L +
Sbjct: 90  LFREGDCWICMELM-STSFDKFYKY-----VYSVLDDVIPEEILGKITLATVKALNHLKE 143

Query: 467 ECEQQVIHRDIKASNIMLDAN-------F--NARLESSF--TLTAGTMGYLAPEYLQYGT 515
               ++IHRDIK SNI+LD +       F  + +L  S   T  AG   Y+APE +    
Sbjct: 144 --NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201

Query: 516 A----TEKTDVFSYGVVVLEVACGRRP 538
           +      ++DV+S G+ + E+A GR P
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFP 228

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  119 bits (301), Expect = 9e-30
 Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 56/247 (22%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNL 406
           R +G GAFG V++A           ++ AVK  + + S + + +F  E +++A   + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL--------------------DRMLYQDSENGVLLS 446
           V+LLG CA    + L++EYM  G L                           S     LS
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
              +L I   +A+ + YL    E++ +HRD+   N ++  N   ++ + F L+       
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI-ADFGLSRNIYSAD 228

Query: 500 ---AGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IER 541
              A     +      PE + Y   T ++DV++YGVV+ E+   G +P         I  
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288

Query: 542 ETEGHKM 548
             +G+ +
Sbjct: 289 VRDGNIL 295

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  120 bits (302), Expect = 1e-29
 Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 51/242 (21%)

Query: 354 RILGRGAFGNVYKAY-------FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RH 403
           + LG G FG V  A                AVK  +   + +  ++ ++E+ ++  + +H
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSL------------DRMLYQDSENGVLLSWYHRL 451
           KN++ LLG C + G L ++ EY   G+L            +     +      +++   +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AG 501
           +    LA  + YL     Q+ IHRD+ A N+++  N   ++ + F L             
Sbjct: 207 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKI-ADFGLARDINNIDYYKKT 262

Query: 502 TMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVAC-GRRP---------IERETEGH 546
           T G L     APE L     T ++DV+S+GV++ E+   G  P          +   EGH
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 322

Query: 547 KM 548
           +M
Sbjct: 323 RM 324

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  117 bits (296), Expect = 1e-29
 Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 21/203 (10%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSII-ACLRHKNLVQLLGW 412
           LGRGA+G V K     SG + AVK  R+  + + +   L +L I    +     V   G 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              +G++ +  E M + SLD+   Q  + G  +       I V +  AL +LH   +  V
Sbjct: 75  LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 131

Query: 473 IHRDIKASNIMLDAN-------F--NARLESSFTLT--AGTMGYLAPE----YLQYGTAT 517
           IHRD+K SN++++A        F  +  L         AG   Y+APE     L     +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191

Query: 518 EKTDVFSYGVVVLEVACGRRPIE 540
            K+D++S G+ ++E+A  R P +
Sbjct: 192 VKSDIWSLGITMIELAILRFPYD 214

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  118 bits (297), Expect = 2e-29
 Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 51/242 (21%)

Query: 354 RILGRGAFGNVYKAY-------FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RH 403
           + LG GAFG V  A                AVK  +   + +  ++ ++E+ ++  + +H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSL------------DRMLYQDSENGVLLSWYHRL 451
           KN++ LLG C + G L ++ EY   G+L            +     +      +++   +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AG 501
           +    LA  + YL     Q+ IHRD+ A N+++  N   ++ + F L             
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKI-ADFGLARDINNIDYYKKT 216

Query: 502 TMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEGH 546
           T G L     APE L     T ++DV+S+GV++ E+   G  P          +   EGH
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276

Query: 547 KM 548
           +M
Sbjct: 277 RM 278

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  116 bits (294), Expect = 4e-29
 Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 51/242 (21%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           + LGRGAFG V +A        ++    AVK  +   +H      ++EL I+  +  H N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 406 LVQLLGWCAEKGE-LLLVYEYMPNGSL------------DRMLYQDSENGVLLSWYHRLN 452
           +V LLG C + G  L+++ E+   G+L               +  +      L+  H + 
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGT 502
               +A  + +L     ++ IHRD+ A NI+L      ++   F L              
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIYKDPDYVRKG 208

Query: 503 MGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP----------IERETEGH 546
              L     APE +     T ++DV+S+GV++ E+   G  P            R  EG 
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268

Query: 547 KM 548
           +M
Sbjct: 269 RM 270

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  115 bits (291), Expect = 6e-29
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTE-FLAELSIIACLRHKNLVQL 409
           R LG+G FGNVY A    S  + A+K   +++    G       E+ I + LRH N+++L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTY 463
            G+  +   + L+ EY P G++ R L +            + +       +  LA+AL+Y
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKL----------SKFDEQRTATYITELANALSY 124

Query: 464 LHQECEQQVIHRDIKASNIMLDANFN---------ARLESSFTLTA-GTMGYLAPEYLQY 513
            H    ++VIHRDIK  N++L +                SS      GT+ YL PE ++ 
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERET 543
               EK D++S GV+  E   G+ P E  T
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  116 bits (293), Expect = 6e-29
 Identities = 58/242 (23%), Positives = 94/242 (38%), Gaps = 50/242 (20%)

Query: 354 RILGRGAFGNVYKAY-----FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           + LG GAFG V +A       + +    AVK  +       +   ++EL +++ L  H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRML--------------YQDSENGVLLSWYHRL 451
           +V LLG C   G  L++ EY   G L   L                  ++ + L     L
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLTAGT 502
           +    +A  + +L     +  IHRD+ A NI+L             AR +++        
Sbjct: 149 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205

Query: 503 MGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP----------IERETEGH 546
              L     APE +     T ++DV+SYG+ + E+   G  P           +   EG 
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265

Query: 547 KM 548
           +M
Sbjct: 266 RM 267

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  121 bits (304), Expect = 6e-29
 Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 29/204 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVA--AVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           LG G FG+V +  +         A+K  +         E + E  I+  L +  +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
            C  +  L+LV E    G L + L         +   +   ++  ++  + YL    E+ 
Sbjct: 404 VCQAE-ALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYL---EEKN 456

Query: 472 VIHRDIKASNIMLDANFNARLESSFTL-----------TAGTMGYL-----APEYLQYGT 515
            +HR++ A N++L     A++ S F L           TA + G       APE + +  
Sbjct: 457 FVHRNLAARNVLLVNRHYAKI-SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515

Query: 516 ATEKTDVFSYGVVVLEVA-CGRRP 538
            + ++DV+SYGV + E    G++P
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKP 539

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  118 bits (297), Expect = 6e-29
 Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 51/243 (20%)

Query: 353 NRILGRGAFGNVYKAY-------FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-R 402
            + LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSL------------DRMLYQDSENGVLLSWYHR 450
           HKN++ LLG C + G L ++ EY   G+L            +            LS    
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT----------A 500
           ++    +A  + YL     ++ IHRD+ A N+++  +   ++ + F L            
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKI-ADFGLARDIHHIDYYKK 249

Query: 501 GTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP---------IERETEG 545
            T G L     APE L     T ++DV+S+GV++ E+   G  P          +   EG
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 309

Query: 546 HKM 548
           H+M
Sbjct: 310 HRM 312

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  115 bits (290), Expect = 7e-29
 Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 33/210 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA-ELSIIACLRHKNLVQL 409
           R LG+G FGNVY A    +  + A+K   +S+   EG    L  E+ I + LRH N++++
Sbjct: 20  RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTY 463
             +  ++  + L+ E+ P G L + L +            R +       +  LA AL Y
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEELADALHY 129

Query: 464 LHQECEQQVIHRDIKASNIMLDAN---------FNARLESSFTLTA-GTMGYLAPEYLQY 513
            H+   ++VIHRDIK  N+++            ++    S    T  GT+ YL PE ++ 
Sbjct: 130 CHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEG 186

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERET 543
            T  EK D++  GV+  E   G  P +  +
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  116 bits (292), Expect = 1e-28
 Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 57/248 (22%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RHKN 405
           ++LG GAFG V  A              AVK  + K     +   ++EL ++  L  H+N
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSL-------------------DRMLYQDSENGVLLS 446
           +V LLG C   G + L++EY   G L                   ++   ++ E+  +L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT------- 499
           +   L     +A  + +L     +  +HRD+ A N+++      ++   F L        
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKI-CDFGLARDIMSDS 226

Query: 500 ---AGTMGYL-----APEYLQYGTATEKTDVFSYGVVVLEVA-CGRRP----------IE 540
                    L     APE L  G  T K+DV+SYG+++ E+   G  P           +
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK 286

Query: 541 RETEGHKM 548
               G KM
Sbjct: 287 LIQNGFKM 294

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  115 bits (289), Expect = 2e-28
 Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 31/229 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLA-ELSIIACLRHKNLV 407
           +  + ILG+GA  NV++     +G + A+K  +  S     +    E  ++  L HKN+V
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 408 QLLG--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           +L            +L+ E+ P GSL  +L ++  N   L     L ++  +   + +L 
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTA-GTMGYLAPEY 510
              E  ++HR+IK  NIM     + +               +    ++  GT  YL P+ 
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186

Query: 511 LQYGTA--------TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
            +                D++S GV     A G  P        +   +
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  119 bits (299), Expect = 2e-28
 Identities = 60/209 (28%), Positives = 86/209 (41%), Gaps = 26/209 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLL- 410
             LG G FG V +     +G   A+K  R + S + +  +  E+ I+  L H N+V    
Sbjct: 20  ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79

Query: 411 -----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                   A     LL  EY   G L + L    EN   L       ++  ++SAL YLH
Sbjct: 80  VPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSALRYLH 138

Query: 466 QECEQQVIHRDIKASNIMLDANFN-----------ARL--ESSFTLTA-GTMGYLAPEYL 511
              E ++IHRD+K  NI+L                A+   +        GT+ YLAPE L
Sbjct: 139 ---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIE 540
           +    T   D +S+G +  E   G RP  
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFL 224

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  113 bits (285), Expect = 5e-28
 Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 64/301 (21%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT--EFLAELSIIACLRHKNLV 407
           F   + LGRG FG V++A         A+KR +  +      + + E+  +A L H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 408 QLLGWCAEK------------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +      EK              L +  +     +L   +               L+I +
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-NGRCTIEERERSVCLHIFL 125

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------------- 492
            +A A+ +LH    + ++HRD+K SNI    +   ++                       
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182

Query: 493 -ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
             +  T   GT  Y++PE +   + + K D+FS G+++ E+     P   + E  + +  
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTD 239

Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           V          +      ++            ++       +P    RP       I+ N
Sbjct: 240 VR-------NLKFPPLFTQKY------PCEYVMV---QDMLSPSPMERPE---AINIIEN 280

Query: 612 E 612
            
Sbjct: 281 A 281

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score =  111 bits (279), Expect = 5e-28
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KT        ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKT-----AKWNMQNGKVGTAHIIYNS 56

Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
             + L   +SY N    +  +  ++DL   L   + VG SAST    E + I SWSF + 
Sbjct: 57  VDKRLSAVVSYPN--ADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114

Query: 254 GFRPVRPKLHPHN 266
                  + +  +
Sbjct: 115 LKSNSTHETNALH 127

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 70.7 bits (172), Expect = 7e-14
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 23  NNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFFDQET 79
           + M   F+      I     +   +G + LTR         SS G  ++  PV  ++  +
Sbjct: 127 HFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-S 185

Query: 80  NTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSS 129
              ASF + F+F I + +     DG+AFFIS  +  +  GS G  LGL   +
Sbjct: 186 AVVASFEATFTFLIKSPDSHP-ADGIAFFISNIDSSIPSGSTGRLLGLFPDA 236

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  114 bits (287), Expect = 8e-28
 Identities = 34/265 (12%), Positives = 64/265 (24%), Gaps = 47/265 (17%)

Query: 327 LRADLVPGPREFSYR-ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK----RS 381
           + A + P   E +    L    R       L  G    V+           A+K     +
Sbjct: 40  VTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGA 99

Query: 382 KHSHEGKTEFLAELSIIACLRHKNLVQLLGWC--------------------------AE 415
           ++S              A L  ++  +                                 
Sbjct: 100 ENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYA 159

Query: 416 KGELLLVYEYMP--NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
               LL+          L   L                 +   L      L     + ++
Sbjct: 160 VANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216

Query: 474 HRDIKASNIMLDAN---------FNARLESSFTLTAGTMGYLAPEYLQYGTA--TEKTDV 522
           H      N+ +  +            ++ +    ++  + Y   E+L   TA  T   + 
Sbjct: 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNA 276

Query: 523 FSYGVVVLEVACGRRPIERETEGHK 547
           +  G+ +  V C   P    T G K
Sbjct: 277 WQLGLSIYRVWCLFLPFGLVTPGIK 301

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  112 bits (282), Expect = 1e-27
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 25/202 (12%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSII-ACLRHKNLVQLLGW 412
           +G G  G V+K  F  +G V AVK  R   + E     L +L ++        +VQ  G 
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                ++ +  E M     +++  +    G +        + V +  AL YL ++    V
Sbjct: 93  FITNTDVFIAMELM-GTCAEKLKKR--MQGPIPERILG-KMTVAIVKALYYLKEK--HGV 146

Query: 473 IHRDIKASNIMLDAN---------FNARLESSF--TLTAGTMGYLAPEYLQYGTATE--- 518
           IHRD+K SNI+LD            + RL        +AG   Y+APE +     T+   
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206

Query: 519 --KTDVFSYGVVVLEVACGRRP 538
             + DV+S G+ ++E+A G+ P
Sbjct: 207 DIRADVWSLGISLVELATGQFP 228

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  111 bits (281), Expect = 2e-27
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 23/206 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSK-HSHEGKTEFLAELSIIACLRHKNLVQL 409
           R LG+G F   ++   A +  V A K   +S       + +   E+SI   L H+++V  
Sbjct: 21  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G+  +   + +V E     SL  +         L     R   +  +     YLH+   
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEAR-YYLRQIVLGCQYLHR--- 133

Query: 470 QQVIHRDIKASNIMLDANFN---------ARLE--SSFTLTA-GTMGYLAPEYLQYGTAT 517
            +VIHRD+K  N+ L+ +            ++E          GT  Y+APE L     +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193

Query: 518 EKTDVFSYGVVVLEVACGRRPIERET 543
            + DV+S G ++  +  G+ P E   
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSC 219

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  112 bits (282), Expect = 2e-27
 Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 23/206 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTE-FLAELSIIACLRHKNLVQL 409
           R LG+G F   ++   A +  V A K   +S      + E    E+SI   L H+++V  
Sbjct: 47  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G+  +   + +V E     SL  +         L     R   +  +     YLH+   
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEAR-YYLRQIVLGCQYLHR--- 159

Query: 470 QQVIHRDIKASNIMLDANFN---------ARLE--SSFTLTA-GTMGYLAPEYLQYGTAT 517
            +VIHRD+K  N+ L+ +            ++E          GT  Y+APE L     +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219

Query: 518 EKTDVFSYGVVVLEVACGRRPIERET 543
            + DV+S G ++  +  G+ P E   
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSC 245

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  111 bits (280), Expect = 2e-27
 Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 79/310 (25%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F    +LG+GAFG V KA  A      A+K+ +H+ E  +  L+E+ ++A L H+ +V+ 
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67

Query: 410 LG-------------WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVV 455
                             +K  L +  EY  NG+L D +        +         +  
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI----HSENLNQQRDEYWRLFR 123

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------------- 492
            +  AL+Y+H    Q +IHRD+K  NI +D + N ++                       
Sbjct: 124 QILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 493 ---ESSFTLTAGTMGYLAPEYLQ----YGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
                + T   GT  Y+A E L     Y    EK D++S G++  E+            G
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYN---EKIDMYSLGIIFFEMIYPFST------G 231

Query: 546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED---EMKRLLLVGLSCANPDSSARPSM 602
            + VN++          + + +        F+++     K+++       + D + RP  
Sbjct: 232 MERVNIL----------KKLRSVSIEFPPDFDDNKMKVEKKII---RLLIDHDPNKRPGA 278

Query: 603 RRVFQILNNE 612
           R    +LN+ 
Sbjct: 279 R---TLLNSG 285

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  110 bits (277), Expect = 4e-27
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSK-HSHEGKTEFLAELSIIACLRHKNLVQL 409
            +LG+G+F  VY+A    +G   A+K   +   +          E+ I   L+H ++++L
Sbjct: 17  NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             +  +   + LV E   NG ++R L              R + +  + + + YLH    
Sbjct: 77  YNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEAR-HFMHQIITGMLYLHS--- 130

Query: 470 QQVIHRDIKASNIMLDANFN---------ARLE--SSFTLTA-GTMGYLAPEYLQ---YG 514
             ++HRD+  SN++L  N N          +L+       T  GT  Y++PE      +G
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG 190

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERET 543
               ++DV+S G +   +  GR P + +T
Sbjct: 191 ---LESDVWSLGCMFYTLLIGRPPFDTDT 216

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  113 bits (283), Expect = 4e-27
 Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 33/230 (14%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLA-ELSIIACLRHKNLV 407
           +  + ILG+GA  NV++     +G + A+K  +  S     +    E  ++  L HKN+V
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 408 QLLGW--CAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +L            +L+ E+ P GSL   +  ++  N   L     L ++  +   + +L
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHL 128

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTA-GTMGYLAPE 509
               E  ++HR+IK  NIM     + +               +    ++  GT  YL P+
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185

Query: 510 YLQYGTA--------TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
             +                D++S GV     A G  P        +   +
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  110 bits (278), Expect = 6e-26
 Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 31/248 (12%)

Query: 317 KWKNMRTGICLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA 376
              + R  +  + DL   P  F   +    +  +   + LG GA+G V       +    
Sbjct: 6   HHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVER 65

Query: 377 AVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-D 432
           A+K   ++  S    ++ L E++++  L H N+++L  +  +K    LV E    G L D
Sbjct: 66  AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125

Query: 433 RMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-N 489
            ++++   +E            I+  + S +TYLH+     ++HRD+K  N++L++   +
Sbjct: 126 EIIHRMKFNEVDA-------AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKD 175

Query: 490 ARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR 536
           A +             +       GT  Y+APE L+     EK DV+S GV++  +  G 
Sbjct: 176 ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY 234

Query: 537 RPIERETE 544
            P   +T+
Sbjct: 235 PPFGGQTD 242

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  107 bits (270), Expect = 6e-26
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 28/209 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLA----ELSIIACLRHKNLV 407
           R++GRG  G+VY+A       + A+K      S +    F      E      L+  ++V
Sbjct: 40  RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD--PVFRTRMQREARTAGRLQEPHVV 97

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            +  +    G+L +    +    L  ML      G L +    + IV  + SAL   H  
Sbjct: 98  PIHDFGEIDGQLYVDMRLINGVDLAAML---RRQGPL-APPRAVAIVRQIGSALDAAHA- 152

Query: 468 CEQQVIHRDIKASNIMLDAN-------FN-ARLESSFTLTA-----GTMGYLAPEYLQYG 514
                 HRD+K  NI++ A+       F  A   +   LT      GT+ Y+APE     
Sbjct: 153 --AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES 210

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERET 543
            AT + D+++   V+ E   G  P + + 
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPYQGDQ 239

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  106 bits (268), Expect = 6e-26
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           R LG GAFG+V+     SSG    +K      S     +  AE+ ++  L H N++++  
Sbjct: 28  RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87

Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
              +   + +V E    G L +R++   +     LS  +   ++  + +AL Y H    Q
Sbjct: 88  VFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFHS---Q 143

Query: 471 QVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYLQ--YG 514
            V+H+D+K  NI+  D + ++ +             +   T  AGT  Y+APE  +    
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVT 203

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETE 544
               K D++S GVV+  +  G  P    + 
Sbjct: 204 ---FKCDIWSAGVVMYFLLTGCLPFTGTSL 230

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113

 Score =  101 bits (252), Expect = 9e-26
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 6/113 (5%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVPFFD 76
           + +++F FT F  N  ++   G +   N V+ +T+        +SS+G ++Y+ P+  ++
Sbjct: 1   AQSLSFSFTKFDPNQEDLIFQGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWE 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS 129
             +    SF +  +F I+    S   DGLAFFI+P + ++   GG LGL  ++
Sbjct: 61  D-SAVLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVISYHGGFLGLFPNA 112

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  107 bits (268), Expect = 1e-25
 Identities = 59/314 (18%), Positives = 108/314 (34%), Gaps = 77/314 (24%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLR-HKNLVQLLG 411
           R+L  G F  VY+A    SG   A+KR   +  E     + E+  +  L  H N+VQ   
Sbjct: 34  RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93

Query: 412 WCA--------EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
             +         + E LL+ E      ++ +  +  E+   LS    L I      A+ +
Sbjct: 94  AASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRGPLSCDTVLKIFYQTCRAVQH 151

Query: 464 LHQECEQQVIHRDIKASNIMLDANFN-----------ARLESSFTLTA------------ 500
           +H+  +  +IHRD+K  N++L                      ++ +A            
Sbjct: 152 MHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210

Query: 501 -GTMGYLAPE---YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW 556
             T  Y  PE           EK D+++ G ++  +   + P E   +G K+        
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE---DGAKL-------- 259

Query: 557 GLYAEGRIIEAADKRLNGAFNE-------DEMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
                 RI       +NG ++             L+    +    +   R S   + +++
Sbjct: 260 ------RI-------VNGKYSIPPHDTQYTVFHSLI---RAMLQVNPEERLS---IAEVV 300

Query: 610 NNEAEPLVVPKLKP 623
           +   E      + P
Sbjct: 301 HQLQEIAAARNVNP 314

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  109 bits (274), Expect = 2e-25
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 32/240 (13%)

Query: 326 CLRADLVPGPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK----RS 381
            +   L   P  F        +  +   R+LG+G+FG V       +G   AVK    R 
Sbjct: 4   SMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 63

Query: 382 KHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD-- 438
                 K   L E+ ++  L H N+++L  +  +KG   LV E    G L D ++ +   
Sbjct: 64  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123

Query: 439 SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML-DANFNARL----- 492
           SE            I+  + S +TY+H+    +++HRD+K  N++L   + +A +     
Sbjct: 124 SEVDA-------ARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDF 173

Query: 493 --------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                           GT  Y+APE L  GT  EK DV+S GV++  +  G  P     E
Sbjct: 174 GLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANE 232

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  105 bits (264), Expect = 2e-25
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 24/207 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA----ELSIIACLRHKNLVQL 409
             LG G    VY A         A+K        K E L     E+   + L H+N+V +
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +    E     LV EY+   +L   +     +G L S    +N    +   + + H    
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPL-SVDTAINFTNQILDGIKHAHD--- 129

Query: 470 QQVIHRDIKASNIMLDANFN--------ARLESSFTLTA-----GTMGYLAPEYLQYGTA 516
            +++HRDIK  NI++D+N          A+  S  +LT      GT+ Y +PE  +    
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERET 543
            E TD++S G+V+ E+  G  P   ET
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGET 216

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  106 bits (267), Expect = 4e-25
 Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 34/242 (14%)

Query: 327 LRADLVPGPREFSYRELRSATRGFHSN------RILGRGAFGNVYKAYFASSGSVAAVKR 380
           L  D+   P  F +R + +     +S        ILG G FG V+K    ++G   A K 
Sbjct: 62  LAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKI 121

Query: 381 -SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD 438
                 + K E   E+S++  L H NL+QL      K +++LV EY+  G L DR++   
Sbjct: 122 IKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII--- 178

Query: 439 SENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------ 492
            +    L+    +  +  +   + ++HQ     ++H D+K  NI+       ++      
Sbjct: 179 -DESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFG 234

Query: 493 -------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGV---VVLEVACGRRPIERE 542
                       +  GT  +LAPE + Y   +  TD++S GV   ++L    G  P   +
Sbjct: 235 LARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL---SGLSPFLGD 291

Query: 543 TE 544
            +
Sbjct: 292 ND 293

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  106 bits (266), Expect = 4e-25
 Identities = 35/271 (12%), Positives = 81/271 (29%), Gaps = 56/271 (20%)

Query: 327 LRADLVPGPREFSYRELRSA-TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK------ 379
           +   L    + F          R      +LG+       +A    +G    V       
Sbjct: 51  VSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE 110

Query: 380 -----------------------RSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK 416
                                  +++   +    F+    ++   + K ++++     + 
Sbjct: 111 RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM 170

Query: 417 GELLLVYEYM----PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             L   + Y        +   +L   S     L  + RL + + +   L  LH      +
Sbjct: 171 WVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227

Query: 473 IHRDIKASNIMLDANFNARL--------ESSFTLTAGTMGYLAPEYLQY----------- 513
           +H  ++  +I+LD      L        + +  +++ + G+  PE               
Sbjct: 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRR 287

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
              T   D ++ G+V+  + C   PI ++  
Sbjct: 288 TLMTFSFDAWALGLVIYWIWCADLPITKDAA 318

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  104 bits (261), Expect = 7e-25
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 35/213 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
            +LG+G+FG V K     +    AVK   ++   ++  +  L E+ ++  L H N+++L 
Sbjct: 28  CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQE 467
               +     +V E    G L D ++ +   SE+           I+  + S +TY+H+ 
Sbjct: 88  EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-------ARIIKQVFSGITYMHK- 139

Query: 468 CEQQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYLQ- 512
               ++HRD+K  NI+L     +  +              +      GT  Y+APE L+ 
Sbjct: 140 --HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197

Query: 513 -YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            Y    EK DV+S GV++  +  G  P   + E
Sbjct: 198 TYD---EKCDVWSAGVILYILLSGTPPFYGKNE 227

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  106 bits (266), Expect = 7e-25
 Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 26/228 (11%)

Query: 336 REFSYRELRSATRGFHSN----RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE 390
           +++  + +       +        LG GAFG V++    ++G V   K  +      K  
Sbjct: 35  KKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT 94

Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYH 449
              E+SI+  L H  L+ L     +K E++L+ E++  G L DR+          +S   
Sbjct: 95  VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA----AEDYKMSEAE 150

Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSF 496
            +N +      L ++H+     ++H DIK  NIM +    + +             +   
Sbjct: 151 VINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207

Query: 497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            +T  T  + APE +        TD+++ GV+   +  G  P   E +
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD 255

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  106 bits (265), Expect = 1e-24
 Identities = 33/270 (12%), Positives = 73/270 (27%), Gaps = 55/270 (20%)

Query: 327 LRADLVPGPREFSYRELRSA-TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK------ 379
           +   L    + F          R      +LG+       +A    +G    V       
Sbjct: 56  VSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE 115

Query: 380 ---------------RSKHSHEGKTEFLAE-----LSIIACLRHKNLVQL--LGWCAEKG 417
                          R +     K +  A+     +     ++     ++  +       
Sbjct: 116 RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM 175

Query: 418 ELLLVYEYMP-----NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            +L  +   P       +   +L   S     L  + RL + + +   L  LH      +
Sbjct: 176 WVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 232

Query: 473 IHRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYLAPEYL----------QYG 514
           +H  ++  +I+LD               + +  ++    G+  PE               
Sbjct: 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPT 292

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETE 544
             T   D ++ G+ +  + C   P   +  
Sbjct: 293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  103 bits (260), Expect = 1e-24
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR--SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G+G+FG V+K     +  V A+K    + + +   +   E+++++      + +  G  
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            +  +L ++ EY+  GS   +L    E G  L       I+  +   L YLH    ++ I
Sbjct: 90  LKDTKLWIIMEYLGGGSALDLL----EPGP-LDETQIATILREILKGLDYLH---SEKKI 141

Query: 474 HRDIKASNIMLDANFNARLE---SSFTLTA---------GTMGYLAPEYLQYGTATEKTD 521
           HRDIKA+N++L  +   +L     +  LT          GT  ++APE ++      K D
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 201

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G+  +E+A G  P
Sbjct: 202 IWSLGITAIELARGEPP 218

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  104 bits (262), Expect = 1e-24
 Identities = 42/225 (18%), Positives = 82/225 (36%), Gaps = 40/225 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-----------RSKHSHEGKTEFLA-------EL 395
           R L +G F  +            A+K               S+  K    +       EL
Sbjct: 37  RTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNEL 94

Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-----DRMLYQDSENGVLLSWYHR 450
            II  ++++  +   G      E+ ++YEYM N S+        +   +    +     +
Sbjct: 95  QIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK 154

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---------ARLESSFTLTA- 500
             I+  + ++ +Y+H   E+ + HRD+K SNI++D N             +       + 
Sbjct: 155 -CIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR 211

Query: 501 GTMGYLAPEYLQ--YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           GT  ++ PE+          K D++S G+ +  +     P   + 
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  106 bits (265), Expect = 1e-24
 Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 36/214 (16%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSI-IACLRHKNLV 407
           F    +LG GA G +       +  VA VKR              E+ +      H N++
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFDNRDVA-VKRILPECFSFADR---EVQLLRESDEHPNVI 81

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +      ++    +  E     +L   +    +          + ++    S L +LH  
Sbjct: 82  RYFCTEKDRQFQYIAIELCA-ATLQEYV---EQKDFAHLGLEPITLLQQTTSGLAHLH-- 135

Query: 468 CEQQVIHRDIKASNIML-----DANFNARL------------ESSFTLT---AGTMGYLA 507
               ++HRD+K  NI++          A +              SF+      GT G++A
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194

Query: 508 PEYLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
           PE L        T   D+FS G V   V      
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  107 bits (269), Expect = 1e-24
 Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 32/232 (13%)

Query: 335 PREFSYRELRSATRGFHS----NRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKT 389
            +++  + +             +  LG GAFG V++    ++G+  A K         K 
Sbjct: 140 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199

Query: 390 EFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD---SENGVLL 445
               E+  ++ LRH  LV L     +  E++++YE+M  G L +++  +    SE+    
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA-- 257

Query: 446 SWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------- 492
                +  +  +   L ++H   E   +H D+K  NIM     +  L             
Sbjct: 258 -----VEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309

Query: 493 ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           + S  +T GT  + APE  +       TD++S GV+   +  G  P   E +
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  103 bits (260), Expect = 1e-24
 Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LGRG FG V++    SS      K  K     +     E+SI+   RH+N++ L    
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 414 AEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
               EL++++E++    + +R+      +   L+    ++ V  +  AL +LH      +
Sbjct: 71  ESMEELVMIFEFISGLDIFERIN----TSAFELNEREIVSYVHQVCEALQFLHS---HNI 123

Query: 473 IHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
            H DI+  NI+     ++ +               +F L      Y APE  Q+   +  
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183

Query: 520 TDVFSYGV---VVLEVACGRRPIERETE 544
           TD++S G    V+L    G  P   ET 
Sbjct: 184 TDMWSLGTLVYVLL---SGINPFLAETN 208

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  102 bits (257), Expect = 2e-24
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 24/207 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQ 408
           +     LG GAFG VYKA    +G++AA K     S E   +++ E+ I+A   H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           LLG     G+L ++ E+ P G++D  +  + + G  L+      +   +  AL +LH   
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVD-AIMLELDRG--LTEPQIQVVCRQMLEALNFLHS-- 135

Query: 469 EQQVIHRDIKASNIMLDANFNARLE---SSFTLTA---------GTMGYLAPEYLQYGTA 516
            +++IHRD+KA N+++    + RL     S              GT  ++APE +   T 
Sbjct: 136 -KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194

Query: 517 TE-----KTDVFSYGVVVLEVACGRRP 538
            +     K D++S G+ ++E+A    P
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPP 221

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  101 bits (255), Expect = 3e-24
 Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 33/211 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             +GRG++G V  A    +    A K+  K+  E    F  E+ I+  L H N+++L   
Sbjct: 15  NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74

Query: 413 CAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQECE 469
             +  ++ LV E    G L +R++++    E+           I+  + SA+ Y H+   
Sbjct: 75  FEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-------ARIMKDVLSAVAYCHK--- 124

Query: 470 QQVIHRDIKASNIMLDANF-NARL-------------ESSFTLTAGTMGYLAPEYLQ--Y 513
             V HRD+K  N +   +  ++ L                     GT  Y++P+ L+  Y
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY 184

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           G    + D +S GV++  + CG  P    T+
Sbjct: 185 G---PECDEWSAGVMMYVLLCGYPPFSAPTD 212

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  103 bits (258), Expect = 4e-24
 Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 22/204 (10%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K      K S+E   + + E+  +  LRH N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            +Q  G    +    LV EY    + D +          L       +  G    L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLH 171

Query: 466 QECEQQVIHRDIKASNIMLDANFNARLE---SSFTLT-----AGTMGYLAPE---YLQYG 514
                 +IHRD+KA NI+L      +L    S+  +       GT  ++APE    +  G
Sbjct: 172 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEG 228

Query: 515 TATEKTDVFSYGVVVLEVACGRRP 538
               K DV+S G+  +E+A  + P
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPP 252

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  105 bits (263), Expect = 4e-24
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 35/213 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
            +LG+G+FG V K     +    AVK   ++   ++  +  L E+ ++  L H N+++L 
Sbjct: 28  CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQE 467
               +     +V E    G L D ++ +   SE+           I+  + S +TY+H+ 
Sbjct: 88  EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-------ARIIKQVFSGITYMHK- 139

Query: 468 CEQQVIHRDIKASNIMLDANF-NARL-------------ESSFTLTAGTMGYLAPEYLQ- 512
               ++HRD+K  NI+L++   +  +              +      GT  Y+APE L+ 
Sbjct: 140 --HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197

Query: 513 -YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            Y    EK DV+S GV++  +  G  P   + E
Sbjct: 198 TYD---EKCDVWSAGVILYILLSGTPPFYGKNE 227

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  102 bits (256), Expect = 5e-24
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +G G+ G V  A    SG   AVK       + +     E+ I+   +H N+V++     
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL ++ E++  G+L      D  + V L+      +   +  AL YLH    Q VIH
Sbjct: 113 VGEELWVLMEFLQGGAL-----TDIVSQVRLNEEQIATVCEAVLQALAYLHA---QGVIH 164

Query: 475 RDIKASNIMLDAN---------FNARLESSF----TLTAGTMGYLAPEYLQYGTATEKTD 521
           RDIK+ +I+L  +         F A++        +L  GT  ++APE +       + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL-VGTPYWMAPEVISRSLYATEVD 223

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G++V+E+  G  P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  102 bits (255), Expect = 5e-24
 Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 42/216 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAA--VKRSKHSHEGKTEFLAELSIIACLRHKNL--VQL 409
           + +G G    V++         A   V   +  ++    +  E++ +  L+  +   ++L
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYLHQ 466
             +      + +V E   N  L+  L +            W +       +  A+  +HQ
Sbjct: 94  YDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKN-------MLEAVHTIHQ 145

Query: 467 ECEQQVIHRDIKASNIMLD-----------ANFNARLESSFTLT--AGTMGYLAPEYLQY 513
                ++H D+K +N ++            AN      +S       GT+ Y+ PE ++ 
Sbjct: 146 ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202

Query: 514 GTA-----------TEKTDVFSYGVVVLEVACGRRP 538
            ++           + K+DV+S G ++  +  G+ P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  100 bits (252), Expect = 9e-24
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 23/197 (11%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCA 414
           +G+GA G VY A   ++G   A+++ +      K   + E+ ++   ++ N+V  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH 474
              EL +V EY+  GSL  ++ +       +       +      AL +LH     QVIH
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHS---NQVIH 139

Query: 475 RDIKASNIMLDAN---------FNARLESSF----TLTAGTMGYLAPEYLQYGTATEKTD 521
           RDIK+ NI+L  +         F A++        T+  GT  ++APE +       K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGPKVD 198

Query: 522 VFSYGVVVLEVACGRRP 538
           ++S G++ +E+  G  P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  101 bits (253), Expect = 2e-23
 Identities = 37/222 (16%), Positives = 82/222 (36%), Gaps = 42/222 (18%)

Query: 348 RGFHSNRILGRGAFGNVYKAYFASSGSVAA--VKRSKHSHEGKTEFLAELSIIACLRHKN 405
           R +   + +G G    V++         A   V   +  ++    +  E++ +  L+  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 406 L--VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASA 460
              ++L  +      + +V E   N  L+  L +            W +       +  A
Sbjct: 69  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKN-------MLEA 120

Query: 461 LTYLHQECEQQVIHRDIKASNIMLD-----------ANFNARLESSFTLT--AGTMGYLA 507
           +  +HQ     ++H D+K +N ++            AN      +S       GT+ Y+ 
Sbjct: 121 VHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177

Query: 508 PEYLQYGTA-----------TEKTDVFSYGVVVLEVACGRRP 538
           PE ++  ++           + K+DV+S G ++  +  G+ P
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  100 bits (250), Expect = 2e-23
 Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 31/209 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +G GA   V  AY A      A+KR           E L E+  ++   H N+V      
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLN------IVVGLASALTYLHQE 467
             K EL LV + +  GS+  ++      G   S    L+      I+  +   L YLH  
Sbjct: 83  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS--GVLDESTIATILREVLEGLEYLH-- 138

Query: 468 CEQQVIHRDIKASNIMLDAN---------FNARLESSFTLT--------AGTMGYLAPEY 510
            +   IHRD+KA NI+L  +          +A L +   +T         GT  ++APE 
Sbjct: 139 -KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197

Query: 511 LQYGTA-TEKTDVFSYGVVVLEVACGRRP 538
           ++       K D++S+G+  +E+A G  P
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAP 226

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  101 bits (253), Expect = 2e-23
 Identities = 36/223 (16%), Positives = 81/223 (36%), Gaps = 44/223 (19%)

Query: 348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHK 404
           R +   + +G G    V++        + A+K     +  ++    +  E++ +  L+  
Sbjct: 56  RIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114

Query: 405 NL--VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLAS 459
           +   ++L  +      + +V E   N  L+  L +            W +       +  
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKN-------MLE 166

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLD-----------ANFNARLESSFTLT--AGTMGYL 506
           A+  +HQ     ++H D+K +N ++            AN      +S       G + Y+
Sbjct: 167 AVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223

Query: 507 APEYLQ-----------YGTATEKTDVFSYGVVVLEVACGRRP 538
            PE ++               + K+DV+S G ++  +  G+ P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  102 bits (257), Expect = 3e-23
 Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 42/222 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--------------RSKHSHEGKTEFLAELSIIA 399
           R LG GA+G V      +  S  A+K               +K+  +   E   E+S++ 
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101

Query: 400 CLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVG 456
            L H N+++L     +K    LV E+   G L ++++ +    E           NI+  
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA-------ANIMKQ 154

Query: 457 LASALTYLHQECEQQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGT 502
           + S + YLH+     ++HRDIK  NI+L + N    +             +       GT
Sbjct: 155 ILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT 211

Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
             Y+APE L+     EK DV+S GV++  + CG  P   + +
Sbjct: 212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND 252

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  101 bits (252), Expect = 3e-23
 Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 31/209 (14%)

Query: 356 LGRGA--FGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           +G+G      V  A +  +G    V+R      S+E  T    EL +     H N+V   
Sbjct: 33  IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                  EL +V  +M  GS   ++     +G  ++      I+ G+  AL Y+H     
Sbjct: 93  ATFIADNELWVVTSFMAYGSAKDLICTHFMDG--MNELAIAYILQGVLKALDYIHH---M 147

Query: 471 QVIHRDIKASNIMLDANFNARL-------------------ESSFTLTAGTMGYLAPEYL 511
             +HR +KAS+I++  +    L                         +   + +L+PE L
Sbjct: 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207

Query: 512 QYGTA--TEKTDVFSYGVVVLEVACGRRP 538
           Q        K+D++S G+   E+A G  P
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVP 236

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  100 bits (251), Expect = 4e-23
 Identities = 36/240 (15%), Positives = 75/240 (31%), Gaps = 35/240 (14%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVA-----AVKRSKHSHEGKTEFL-AE 394
            E +  ++  + + +LG GAF  VY+A               +K  K ++  +       
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNI 453
           +  +        ++       +   +LV E    G+L + +    +    ++     ++ 
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF 177

Query: 454 VVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS------------------ 495
            + +   +  +H   + ++IH DIK  N +L   F  + +                    
Sbjct: 178 AMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK 234

Query: 496 -------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
                  FT    T G+   E L       + D F     V  +  G     +   G   
Sbjct: 235 LFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 99.2 bits (248), Expect = 4e-23
 Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 27/208 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
            +LG GAF  V+      +G + A+K   K      +    E++++  ++H+N+V L   
Sbjct: 15  EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74

Query: 413 CAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                   LV + +  G L DR+L +   +E            ++  + SA+ YLH   E
Sbjct: 75  YESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-------LVIQQVLSAVKYLH---E 124

Query: 470 QQVIHRDIKASNIMLDANF-NARL------------ESSFTLTAGTMGYLAPEYLQYGTA 516
             ++HRD+K  N++      N+++                +   GT GY+APE L     
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPY 184

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETE 544
           ++  D +S GV+   + CG  P   ETE
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETE 212

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 99.8 bits (249), Expect = 4e-23
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 29/207 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIA-CLRHKNLVQLLG--- 411
           +G G +G VYK     +G +AA+K    + + + E   E++++     H+N+    G   
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91

Query: 412 ---WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                    +L LV E+   GS+   L ++++    L       I   +   L++LH   
Sbjct: 92  KKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNT-LKEEWIAYICREILRGLSHLH--- 146

Query: 469 EQQVIHRDIKASNIMLDANFNARLE---SSFTLTA---------GTMGYLAPEYLQYGTA 516
           + +VIHRDIK  N++L  N   +L     S  L           GT  ++APE +     
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206

Query: 517 TE-----KTDVFSYGVVVLEVACGRRP 538
            +     K+D++S G+  +E+A G  P
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEGAPP 233

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 98.6 bits (246), Expect = 8e-23
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 19/201 (9%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
           F     LG G++G+VYKA    +G + A+K+     + + E + E+SI+      ++V+ 
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQCDSPHVVKY 89

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G   +  +L +V EY   GS+  ++         L+      I+      L YLH    
Sbjct: 90  YGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHF--- 143

Query: 470 QQVIHRDIKASNIMLDANFNARLE---SSFTLTA---------GTMGYLAPEYLQYGTAT 517
            + IHRDIKA NI+L+   +A+L     +  LT          GT  ++APE +Q     
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN 203

Query: 518 EKTDVFSYGVVVLEVACGRRP 538
              D++S G+  +E+A G+ P
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  102 bits (255), Expect = 9e-23
 Identities = 44/208 (21%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 354 RILGRGAFGNVYKAY-FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             +  G  G +Y A     +G    +K        E +   +AE   +A + H ++VQ+ 
Sbjct: 86  GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 411 -----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                          +V EY+   SL R   Q       L     +  ++ +  AL+YLH
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK------LPVAEAIAYLLEILPALSYLH 199

Query: 466 QECEQQVIHRDIKASNIMLDAN------FN-ARLESSFTLTAGTMGYLAPEYLQYGTATE 518
                 +++ D+K  NIML                +SF    GT G+ APE ++    T 
Sbjct: 200 ---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVR-TGPTV 255

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGH 546
            TD+++ G  +  +              
Sbjct: 256 ATDIYTVGRTLAALTLDLPTRNGRYVDG 283

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 97.7 bits (244), Expect = 2e-22
 Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 30/213 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA----ELSIIACLRHKNLVQL 409
            ILG G    V+ A         AVK  +        F      E    A L H  +V +
Sbjct: 18  EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77

Query: 410 LGWCAEKGELL----LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                 +        +V EY+   +L  ++      G + +    + ++     AL + H
Sbjct: 78  YDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPM-TPKRAIEVIADACQALNFSH 133

Query: 466 QECEQQVIHRDIKASNIMLDAN-------F---NARLESSFTLTA-----GTMGYLAPEY 510
              +  +IHRD+K +NIM+ A        F    A  +S  ++T      GT  YL+PE 
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERET 543
            +  +   ++DV+S G V+ EV  G  P   ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 98.0 bits (244), Expect = 2e-22
 Identities = 49/253 (19%), Positives = 86/253 (33%), Gaps = 65/253 (25%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
             +G+G++G V  A    + ++ A+K        + + +       E+ ++  L H N+ 
Sbjct: 32  GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91

Query: 408 QLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRL--------------- 451
           +L     ++  + LV E    G L D++     ++    +                    
Sbjct: 92  RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151

Query: 452 --------------------NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR 491
                               NI+  + SAL YLH    Q + HRDIK  N +   N +  
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFE 208

Query: 492 L------------------ESSFTLTAGTMGYLAPEYLQYGTA--TEKTDVFSYGVVVLE 531
           +                      T  AGT  ++APE L         K D +S GV++  
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268

Query: 532 VACGRRPIERETE 544
           +  G  P     +
Sbjct: 269 LLMGAVPFPGVND 281

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 97.9 bits (244), Expect = 7e-22
 Identities = 70/312 (22%), Positives = 112/312 (35%), Gaps = 84/312 (26%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSI-IACLRHKNLV 407
             S +ILG G+ G V     +  G   AVKR      +     L E+ +      H N++
Sbjct: 17  VVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVI 72

Query: 408 QLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYL 464
           +          L +  E   N +L D +  ++   EN  L   Y+ ++++  +AS + +L
Sbjct: 73  RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131

Query: 465 HQECEQQVIHRDIKASNIMLD-----------ANFNARL--------------ESSFTLT 499
           H     ++IHRD+K  NI++               N R+              +SSF   
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188

Query: 500 ----AGTMGYLAPEYLQYGTA-------TEKTDVFSYGVVVLEVAC-GRRPIERETEGHK 547
               +GT G+ APE L+           T   D+FS G V   +   G+ P   +     
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS--- 245

Query: 548 MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLS---------CANPDSSA 598
                        E  I       + G F+ DEMK L    L            + D   
Sbjct: 246 ------------RESNI-------IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLK 286

Query: 599 RPSMRRVFQILN 610
           RP+     ++L 
Sbjct: 287 RPTAM---KVLR 295

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 96.2 bits (240), Expect = 7e-22
 Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 35/200 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-------RSKHSHEGKTEFLAELSIIACLRHKNL 406
             LG G F  V K    S+G   A K       R+      + E   E+SI+  + H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTY 463
           + L      + +++L+ E +  G L D +  ++  SE           + +  +   + Y
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA-------TSFIKQILDGVNY 130

Query: 464 LHQECEQQVIHRDIKASNIML-DANFNARL--------------ESSFTLTAGTMGYLAP 508
           LH    +++ H D+K  NIML D N                      F    GT  ++AP
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187

Query: 509 EYLQYGTATEKTDVFSYGVV 528
           E + Y     + D++S GV+
Sbjct: 188 EIVNYEPLGLEADMWSIGVI 207

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 97.0 bits (242), Expect = 1e-21
 Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 37/215 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             LG+GAF  V +     +G   A       K S     +   E  I   L+H N+V+L 
Sbjct: 17  EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQE 467
              +E+G   L+++ +  G L + ++ ++  SE           + +  +  A+ + H  
Sbjct: 77  DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILEAVLHCH-- 127

Query: 468 CEQQVIHRDIKASNIML-DANFNARL--------------ESSFTLTAGTMGYLAPEYLQ 512
            +  V+HR++K  N++L      A +              + ++   AGT GYL+PE L+
Sbjct: 128 -QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186

Query: 513 YGTATEKTDVFSYGVVV---LEVACGRRPIERETE 544
                +  D+++ GV++   L    G  P   E +
Sbjct: 187 KDPYGKPVDLWACGVILYILL---VGYPPFWDEDQ 218

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 35/200 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-------RSKHSHEGKTEFLAELSIIACLRHKNL 406
             LG G F  V K    S+G   A K       R+      + E   E+SI+  + H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTY 463
           + L      + +++L+ E +  G L D +  ++  SE           + +  +   + Y
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA-------TSFIKQILDGVNY 130

Query: 464 LHQECEQQVIHRDIKASNIMLD--ANFNARL-------------ESSFTLTAGTMGYLAP 508
           LH    +++ H D+K  NIML         +                F    GT  ++AP
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187

Query: 509 EYLQYGTATEKTDVFSYGVV 528
           E + Y     + D++S GV+
Sbjct: 188 EIVNYEPLGLEADMWSIGVI 207

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 93.8 bits (234), Expect = 2e-21
 Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 41/219 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-------RSKHSHEGKTEFLAELSIIACLRHKNL 406
             LG G F  V K     +G   A K        S      + E   E++I+  +RH N+
Sbjct: 11  EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTY 463
           + L      K +++L+ E +  G L D +  ++  +E+            +  +   + Y
Sbjct: 71  ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QFLKQILDGVHY 123

Query: 464 LHQECEQQVIHRDIKASNIMLD--ANFNARL-------------ESSFTLTAGTMGYLAP 508
           LH    +++ H D+K  NIML      N R+              + F    GT  ++AP
Sbjct: 124 LHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180

Query: 509 EYLQYGTATEKTDVFSYGV---VVLEVACGRRPIERETE 544
           E + Y     + D++S GV   ++L    G  P   ET+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILL---SGASPFLGETK 216

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 93.8 bits (234), Expect = 2e-21
 Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 34/213 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             LG+GAF  V +    ++G   A K     K S     +   E  I   L+H N+V+L 
Sbjct: 12  EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRML----YQDSENGVLLSWYHRLNIVVGLASALTYLH 465
               E+    LV++ +  G L + ++    Y +++           + +  +  ++ Y H
Sbjct: 72  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---------HCIQQILESIAYCH 122

Query: 466 QECEQQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYL 511
                 ++HR++K  N++L      A +               ++   AGT GYL+PE L
Sbjct: 123 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           +    ++  D+++ GV++  +  G  P   E +
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 94.3 bits (235), Expect = 4e-21
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 40/216 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             LG+GAF  V +    ++G   A K     K S     +   E  I   L+H N+V+L 
Sbjct: 35  EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRML----YQDSENGVLLSWYHRLNIVVGLASALTYLH 465
               E+    LV++ +  G L + ++    Y +++           + +  +  ++ Y H
Sbjct: 95  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---------HCIQQILESIAYCH 145

Query: 466 QECEQQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYL 511
                 ++HR++K  N++L      A +               ++   AGT GYL+PE L
Sbjct: 146 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 202

Query: 512 QYGTATEKTDVFSYGVVV---LEVACGRRPIERETE 544
           +    ++  D+++ GV++   L    G  P   E +
Sbjct: 203 KKDPYSKPVDIWACGVILYILL---VGYPPFWDEDQ 235

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 93.9 bits (234), Expect = 4e-21
 Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 31/213 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRH-KNLVQL 409
           + LGRG F  V +    S+G   A K   + +   + + E L E++++   +    ++ L
Sbjct: 35  KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94

Query: 410 LGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                   E++L+ EY   G +    L + +E    +S    + ++  +   + YLH   
Sbjct: 95  HEVYENTSEIILILEYAAGGEIFSLCLPELAEM---VSENDVIRLIKQILEGVYYLH--- 148

Query: 469 EQQVIHRDIKASNIMLDANF-NARL-------------ESSFTLTAGTMGYLAPEYLQYG 514
           +  ++H D+K  NI+L + +    +                     GT  YLAPE L Y 
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208

Query: 515 TATEKTDVFSYGV---VVLEVACGRRPIERETE 544
             T  TD+++ G+   ++L       P   E  
Sbjct: 209 PITTATDMWNIGIIAYMLL---THTSPFVGEDN 238

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 93.5 bits (233), Expect = 6e-21
 Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 41/219 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-------RSKHSHEGKTEFLAELSIIACLRHKNL 406
             LG G F  V K    S+G   A K       +S      + +   E+SI+  ++H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTY 463
           + L      K +++L+ E +  G L D +  ++  +E     + + +  I+    + + Y
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA--TEFLK-QIL----NGVYY 129

Query: 464 LHQECEQQVIHRDIKASNIML--DANFNARL-------------ESSFTLTAGTMGYLAP 508
           LH     Q+ H D+K  NIML        R+              + F    GT  ++AP
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186

Query: 509 EYLQYGTATEKTDVFSYGV---VVLEVACGRRPIERETE 544
           E + Y     + D++S GV   ++L    G  P   +T+
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILL---SGASPFLGDTK 222

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 93.1 bits (232), Expect = 1e-20
 Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 32/210 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRHKNLV 407
            ++G+G F  V +     +G   AVK       +        +   E SI   L+H ++V
Sbjct: 30  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89

Query: 408 QLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           +LL   +  G L +V+E+M    L   ++ +     V  S     + +  +  AL Y H 
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYCH- 147

Query: 467 ECEQQVIHRDIKASNIML-DANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
             +  +IHRD+K   ++L     +A +                      GT  ++APE +
Sbjct: 148 --DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205

Query: 512 QYGTATEKTDVFSYGVVV---LEVACGRRP 538
           +     +  DV+  GV++   L    G  P
Sbjct: 206 KREPYGKPVDVWGCGVILFILL---SGCLP 232

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 92.8 bits (231), Expect = 1e-20
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 30/213 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             LGRGA   VY+     +    A+K   K   +       E+ ++  L H N+++L   
Sbjct: 59  SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKLKEI 116

Query: 413 CAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                E+ LV E +  G L DR++ +   SE           + V  +  A+ YLH   E
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-------DAVKQILEAVAYLH---E 166

Query: 470 QQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGT 515
             ++HRD+K  N++      +A L             +       GT GY APE L+   
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
              + D++S G++   + CG  P   E     M
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFM 259

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 90.0 bits (224), Expect = 5e-20
 Identities = 58/254 (22%), Positives = 92/254 (36%), Gaps = 58/254 (22%)

Query: 328 RADLVPGPREFSYRELRSATRGFHSN----RILGRGAFGNVYKAYFASSGSVAAVK---- 379
           R   +PG           +T GF+ N     ILGRG    V +     +    AVK    
Sbjct: 2   RDAALPGSH---------STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDV 52

Query: 380 ------RSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMPNGSL- 431
                  ++   E +   L E+ I+  +  H N++QL           LV++ M  G L 
Sbjct: 53  TGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112

Query: 432 DRML----YQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN 487
           D +       + E            I+  L   +  LH   +  ++HRD+K  NI+LD +
Sbjct: 113 DYLTEKVTLSEKETR---------KIMRALLEVICALH---KLNIVHRDLKPENILLDDD 160

Query: 488 FNARL-----------ESSFTLTAGTMGYLAPEYLQYGTATEKT------DVFSYGVVVL 530
            N +L                   GT  YLAPE ++              D++S GV++ 
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 531 EVACGRRPIERETE 544
            +  G  P     +
Sbjct: 221 TLLAGSPPFWHRKQ 234

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 89.4 bits (222), Expect = 6e-20
 Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 28/192 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
            G       ++A   +     A+     +     +   E L+    ++ +    + ++L 
Sbjct: 39  HGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLD 98

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               +   L+V E++  GSL  +     +     S    +  +  LA+A    H+     
Sbjct: 99  VVHTRAGGLVVAEWIRGGSLQEVA----DTS--PSPVGAIRAMQSLAAAADAAHR---AG 149

Query: 472 VIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLE 531
           V       S + +  + +  L             +         A  + D+   G  +  
Sbjct: 150 VALSIDHPSRVRVSIDGDVVL--------AYPATMPD-------ANPQDDIRGIGASLYA 194

Query: 532 VACGRRPIERET 543
           +   R P+    
Sbjct: 195 LLVNRWPLPEAG 206

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 88.4 bits (219), Expect = 4e-19
 Identities = 61/289 (21%), Positives = 98/289 (33%), Gaps = 95/289 (32%)

Query: 354 RILGRGAFGNVYKAY-----FASSGSVAAVKRSK--HSHEGKTEFLAELSIIACL-RHKN 405
           + LGRGAFG V +A        ++    AVK  K   +H      ++EL I+  +  H N
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87

Query: 406 LVQLLGWC-AEKGELLLVYEYMPNGSL-------------------DRMLYQDSENGVLL 445
           +V LLG C    G L+++ E+   G+L                        +D    + +
Sbjct: 88  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147

Query: 446 SWYHRLNIVVGLASALTYLHQEC------------------------------------- 468
               RL+ +    S+ +    E                                      
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207

Query: 469 ---EQQVIHRDIKASNIMLDANFNARLESSFTLT----------AGTMGYL-----APEY 510
               ++ IHRD+ A NI+L      ++   F L                 L     APE 
Sbjct: 208 FLASRKCIHRDLAARNILLSEKNVVKI-CDFGLARDIYKDPDYVRKGDARLPLKWMAPET 266

Query: 511 LQYGTATEKTDVFSYGVVVLEVAC-GRRP----------IERETEGHKM 548
           +     T ++DV+S+GV++ E+   G  P            R  EG +M
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 315

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 87.8 bits (218), Expect = 6e-19
 Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 44/223 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIACLR-H 403
            ++GRG    V +    ++G   AVK           +   E +     E  I+  +  H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSL-DRML----YQDSENGVLLSWYHRLNIVVGLA 458
            +++ L+        + LV++ M  G L D +       + E           +I+  L 
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR---------SIMRSLL 210

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLA 507
            A+++LH      ++HRD+K  NI+LD N   RL                   GT GYLA
Sbjct: 211 EAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267

Query: 508 PEYLQYGTATEKT------DVFSYGVVVLEVACGRRPIERETE 544
           PE L+              D+++ GV++  +  G  P     +
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 87.0 bits (216), Expect = 7e-19
 Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 43/220 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA----ELSIIACLRHK-- 404
            +LG G FG+VY     S     A+K   + + S  G+         E+ ++  +     
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108

Query: 405 NLVQLLGWCAEKGELLLVYEY-MPNGSL-DRMLYQDSENGVLLSWYHRLN------IVVG 456
            +++LL W       +L+ E   P   L D +    +E G        L           
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFI----TERG-------ALQEELARSFFWQ 157

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARL----------ESSFTLTAGTMGY 505
           +  A+ + H      V+HRDIK  NI++D N    +L          ++ +T   GT  Y
Sbjct: 158 VLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 214

Query: 506 LAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETE 544
             PE+++Y         V+S G+++ ++ CG  P E + E
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 88.1 bits (219), Expect = 7e-19
 Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 41/215 (19%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIACLRHKN 405
           F   R +G+G+FG V       +  + A+K  +K     + E      EL I+  L H  
Sbjct: 17  FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76

Query: 406 LVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASA 460
           LV L  W +  ++ ++ +V + +  G L   L Q+    E  V L  +     +  L  A
Sbjct: 77  LVNL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL--F-----ICELVMA 127

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT-AGTMGYLAPE 509
           L YL     Q++IHRD+K  NI+LD + +  +            +   T AGT  Y+APE
Sbjct: 128 LDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPE 184

Query: 510 YLQ------YGTATEKTDVFSYGVVVLEVACGRRP 538
                    Y  A    D +S GV   E+  GRRP
Sbjct: 185 MFSSRKGAGYSFA---VDWWSLGVTAYELLRGRRP 216

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 85.3 bits (210), Expect = 1e-18
 Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 31/244 (12%)

Query: 13  FLLNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPV 72
           F   +SF   + +  D T          G++      I +   L    S  GS+      
Sbjct: 30  FEYKYSFKGPHLVQSDGTV---PFWAHAGNAIPSADQIRIAPSL---KSQRGSVWTKTKA 83

Query: 73  PFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLT 132
            F         ++    +F +         DGLA + + +  + G   G   + N     
Sbjct: 84  AF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTENQGLDGPVFGSADMWNG---- 130

Query: 133 KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGID------LKSGNVIT 186
               V I FD+  +    +     +  +   +      D   Q +             + 
Sbjct: 131 ----VGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVR 186

Query: 187 AWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQ 246
           A I Y      L V ++                 +  +    + G SA+T G  + H + 
Sbjct: 187 AKITYYQK--TLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVL 244

Query: 247 SWSF 250
           S+  
Sbjct: 245 SFLT 248

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 87.1 bits (216), Expect = 2e-18
 Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 36/212 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIACLRHK 404
           + LG GA G V  A+   +    A++          S    +       E+ I+  L H 
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++++  +  +  +  +V E M  G L D+++     N  L     +      +  A+ Y
Sbjct: 201 CIIKIKNFF-DAEDYYIVLELMEGGELFDKVV----GNKRLKEATCK-LYFYQMLLAVQY 254

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTA-GTMGYLAPE 509
           LH   E  +IHRD+K  N++L +     L             E+S   T  GT  YLAPE
Sbjct: 255 LH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311

Query: 510 YLQYGTA---TEKTDVFSYGVVVLEVACGRRP 538
            L            D +S GV++     G  P
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 85.8 bits (213), Expect = 3e-18
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 41/199 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIA-CLRHKNLVQLLG 411
             +G G++    +    ++    AVK   K   +       E+ I+    +H N++ L  
Sbjct: 28  EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKD 83

Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQEC 468
              +   + +V E M  G L D++L Q   SE            ++  +   + YLH   
Sbjct: 84  VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA-------SAVLFTITKTVEYLH--- 133

Query: 469 EQQVIHRDIKASNIML-DANFNA--------------RLESSFTLTA-GTMGYLAPEYLQ 512
            Q V+HRD+K SNI+  D + N               R E+   +T   T  ++APE L+
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE 193

Query: 513 ---YGTATEKTDVFSYGVV 528
              Y       D++S GV+
Sbjct: 194 RQGYD---AACDIWSLGVL 209

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 85.1 bits (211), Expect = 3e-18
 Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 45/222 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA----ELSIIACLR---- 402
            +LG+G FG V+  +  +     A+K   R++               E++++  +     
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGS--LDRMLYQDSENGVLLSWYHRL------NIV 454
           H  +++LL W   +   +LV E         D +    +E G        L         
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI----TEKG-------PLGEGPSRCFF 145

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFN----------ARLESS-FTLTAGTM 503
             + +A+ + H    + V+HRDIK  NI++D              A L    +T   GT 
Sbjct: 146 GQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTR 202

Query: 504 GYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETE 544
            Y  PE++           V+S G+++ ++ CG  P ER+ E
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 59/233 (25%), Positives = 89/233 (38%), Gaps = 46/233 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK           E +  E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALTYL 464
              E     L  EY   G L DR+      +         +           L + + YL
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI----EPDI-------GMPEPDAQRFFHQLMAGVVYL 121

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPE 509
           H      + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177

Query: 510 YLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY 559
            L+   +    E  DV+S G+V+  +  G  P ++ ++        DW     
Sbjct: 178 LLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKT 226

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 86.8 bits (215), Expect = 5e-18
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   R+LGRG FG V+     ++G + A K+         +G    + E  I+A +  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246

Query: 406 LVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           +V L  +  E K +L LV   M  G +   +Y   E+         +     + S L +L
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ 512
           H   ++ +I+RD+K  N++LD + N R+             + T   AGT G++APE L 
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                   D F+ GV + E+   R P     E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 43/216 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA-ELSIIACLRHKNLVQL 409
             LG G FG V       +G   AVK   R K         +  E+  +   RH ++++L
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 410 LGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALT 462
               +   +  +V EY+  G L D +     ++G       R+  +        + SA+ 
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYI----CKHG-------RVEEMEARRLFQQILSAVD 125

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYLAPEY 510
           Y H+     V+HRD+K  N++LDA+ NA++ + F L+             G+  Y APE 
Sbjct: 126 YCHR---HMVVHRDLKPENVLLDAHMNAKI-ADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181

Query: 511 LQ---YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           +    Y     + D++S GV++  + CG  P + E 
Sbjct: 182 ISGRLYAGP--EVDIWSCGVILYALLCGTLPFDDEH 215

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 86.8 bits (215), Expect = 6e-18
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 26/220 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   R+LG+G FG V      ++G + A K+ +       +G+   L E  I+  +  + 
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSW---YHRLNIVVGLASALT 462
           +V L      K  L LV   M  G L   +Y   + G   +    Y        +   L 
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY-----AAEICCGLE 300

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLT-AGTMGYLAPEYL 511
            LH    +++++RD+K  NI+LD + + R+          E        GT+GY+APE +
Sbjct: 301 DLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL 551
           +    T   D ++ G ++ E+  G+ P ++  +  K   +
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 46/229 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK-RSKHSHEGKTEFLA-ELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK           E +  E+ I   L H+N+V+  G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 412 WCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALTYL 464
              E     L  EY   G L DR+      +         +           L + + YL
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRI----EPDI-------GMPEPDAQRFFHQLMAGVVYL 121

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGYLAPE 509
           H      + HRDIK  N++LD   N ++ S F L                 GT+ Y+APE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKI-SDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177

Query: 510 YLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV 555
            L+   +    E  DV+S G+V+  +  G  P ++ ++        DW 
Sbjct: 178 LLKRREF--HAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWK 222

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 83.2 bits (206), Expect = 2e-17
 Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 56/245 (22%)

Query: 332 VPGPREFSYRELRSATRGFHSN-----RILGRGAFGNVYKAYFASSGSVAAVK---RSKH 383
           +  P +    E  +A  G +S        LG GAFG V+ A          VK   + K 
Sbjct: 3   LEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV 62

Query: 384 SHEGKTEFLA------ELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ 437
             +   E         E++I++ + H N++++L     +G   LV E   +G        
Sbjct: 63  LEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-------- 114

Query: 438 DSENGVL---LSWYHRLN------IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF 488
                 L   +  + RL+      I   L SA+ YL     + +IHRDIK  NI++  +F
Sbjct: 115 ----LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDF 167

Query: 489 NARLESSFTLTA------------GTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVA 533
             +L   F   A            GT+ Y APE L    Y     + +++S GV +  + 
Sbjct: 168 TIKL-IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGP--ELEMWSLGVTLYTLV 224

Query: 534 CGRRP 538
               P
Sbjct: 225 FEENP 229

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 82.6 bits (205), Expect = 2e-17
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 33/202 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG----KTEFLAELSIIACLRHKNLVQLLG 411
           +G G++G V+K     +G + A+K+   S +     K   L E+ ++  L+H NLV LL 
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-LREIRMLKQLKHPNLVNLLE 69

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQ 470
               K  L LV+EY      D  +  + +     +  +   +I      A+ + H+    
Sbjct: 70  VFRRKRRLHLVFEYC-----DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---H 121

Query: 471 QVIHRDIKASNIMLDANFN--------ARLESS----FTLTAGTMGYLAPEYL----QYG 514
             IHRD+K  NI++  +          ARL +     +     T  Y +PE L    QYG
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181

Query: 515 TATEKTDVFSYGVVVLEVACGR 536
                 DV++ G V  E+  G 
Sbjct: 182 PP---VDVWAIGCVFAELLSGV 200

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 31/201 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGK-TEFLA--ELSIIACLRHKNLVQLLGW 412
           +G G++G V K     +G + A+K+   S + K  + +A  E+ ++  LRH+NLV LL  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
           C +K    LV+E++     D  +  D E     L +      +  + + + + H      
Sbjct: 93  CKKKKRWYLVFEFV-----DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS---HN 144

Query: 472 VIHRDIKASNIMLDANFN--------ARLESS----FTLTAGTMGYLAPEYL----QYGT 515
           +IHRDIK  NI++  +          AR  ++    +     T  Y APE L    +YG 
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204

Query: 516 ATEKTDVFSYGVVVLEVACGR 536
           A    DV++ G +V E+  G 
Sbjct: 205 A---VDVWAIGCLVTEMFMGE 222

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 42/215 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G+G F  V  A    +G   A+K   +++ +     +   E+ I+  L H N+V+L 
Sbjct: 21  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALTY 463
                +  L L+ EY   G + D +      +G       R+           + SA+ Y
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFDYL----VAHG-------RMKEKEARSKFRQIVSAVQY 129

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYLAPEYL 511
            HQ   ++++HRD+KA N++LDA+ N ++ + F  +             G   Y APE  
Sbjct: 130 CHQ---KRIVHRDLKAENLLLDADMNIKI-ADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185

Query: 512 Q---YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           Q   Y     + DV+S GV++  +  G  P + + 
Sbjct: 186 QGKKY--DGPEVDVWSLGVILYTLVSGSLPFDGQN 218

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 84.0 bits (208), Expect = 2e-17
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 33/208 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLL--- 410
           +++G G+FG VY+A    SG + A+K+     + K     EL I+  L H N+V+L    
Sbjct: 60  KVIGNGSFGVVYQAKLCDSGELVAIKKVL---QDKRFKNRELQIMRKLDHCNIVRLRYFF 116

Query: 411 ---GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
              G   ++  L LV +Y+P  ++ R+    S     L   +    +  L  +L Y+H  
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 174

Query: 468 CEQQVIHRDIKASNIMLDANFN---------AR-LESSFTLTA--GTMGYLAPEYL---- 511
               + HRDIK  N++LD +           A+ L       +   +  Y APE +    
Sbjct: 175 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            Y ++    DV+S G V+ E+    +PI
Sbjct: 233 DYTSS---IDVWSAGCVLAEL-LLGQPI 256

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 85.3 bits (211), Expect = 2e-17
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+K          +G+T  L E   LS+++   
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250

Query: 403 HKNLVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGL 457
              +V +    A     +L  + + M  G L   L Q    SE  +    Y        +
Sbjct: 251 CPFIVCM--SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF--Y-----AAEI 301

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLT-----------AGTMGYL 506
              L ++H    + V++RD+K +NI+LD + + R+ S   L             GT GY+
Sbjct: 302 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRI-SDLGLACDFSKKKPHASVGTHGYM 357

Query: 507 APEYLQYGTATEKT-DVFSYGVVVLEVACGRRP 538
           APE LQ G A + + D FS G ++ ++  G  P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 82.0 bits (203), Expect = 4e-17
 Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 32/233 (13%)

Query: 335 PREFSYRELRSATRGFH-----SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT 389
             E  ++               S ++LG G  G V + +   +G   A+K    S + + 
Sbjct: 11  GLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ 70

Query: 390 EFLAELSIIACLRHKNLVQLLGWC----AEKGELLLVYEYMPNGSL-DRMLYQDSENGVL 444
           E              ++V +L         K  LL++ E M  G L  R+  +  +    
Sbjct: 71  EVDHHWQ---ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA--- 124

Query: 445 LSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML-DANFNARL----------- 492
            +      I+  + +A+ +LH      + HRD+K  N++      +A L           
Sbjct: 125 FTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181

Query: 493 -ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
            +++      T  Y+APE L      +  D++S GV++  + CG  P    T 
Sbjct: 182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 81.0 bits (201), Expect = 5e-17
 Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 35/206 (16%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLRHKNLVQL 409
           +G G +G V+KA    +  + A+KR +     EG        L E+ ++  L+HKN+V+L
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG---VPSSALREICLLKELKHKNIVRL 66

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                   +L LV+E+      D   Y DS NG L       + +  L   L + H    
Sbjct: 67  HDVLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHS--- 119

Query: 470 QQVIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QY 513
           + V+HRD+K  N++++       ANF  AR        ++    T+ Y  P+ L     Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPI 539
            T+    D++S G +  E+A   RP+
Sbjct: 180 STS---IDMWSAGCIFAELANAGRPL 202

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 81.6 bits (202), Expect = 6e-17
 Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 31/214 (14%)

Query: 352 SNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSII-ACLRHKNLVQLL 410
            ++ LG G+F    K     S    AVK      E  T+   E++ +  C  H N+V+L 
Sbjct: 15  KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLH 72

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHRLNIVVGLASALTYLHQE 467
               ++    LV E +  G L +R+  +   SE            I+  L SA++++H  
Sbjct: 73  EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEA-------SYIMRKLVSAVSHMH-- 123

Query: 468 CEQQVIHRDIKASNIML-DANFNARL--------------ESSFTLTAGTMGYLAPEYLQ 512
            +  V+HRD+K  N++  D N N  +                       T+ Y APE L 
Sbjct: 124 -DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETEGH 546
                E  D++S GV++  +  G+ P +      
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 81.5 bits (201), Expect = 7e-17
 Identities = 46/306 (15%), Positives = 99/306 (32%), Gaps = 55/306 (17%)

Query: 336 REFSYRELRSATRGFHSNRILGRGAFGN-----VYKAYFASSGSVAAVKRSKHSHEGKTE 390
           RE   RE+++  +  H   +    A+         +          +      S      
Sbjct: 48  REKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDA 107

Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
              ++  +     KN V  L   + K  L +  +     +L   + +             
Sbjct: 108 PSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR-EHGVC 166

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------------ 492
           L+I + +A A+ +LH    + ++HRD+K SNI    +   ++                  
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223

Query: 493 ------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGH 546
                  ++ T   GT  Y++PE +     + K D+FS G+++ E+         + E  
Sbjct: 224 LTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERV 280

Query: 547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF 606
           +++  V          +      ++        +   ++       +P  + RP      
Sbjct: 281 RIITDVR-------NLKFPLLFTQKY------PQEHMMV---QDMLSPSPTERPE---AT 321

Query: 607 QILNNE 612
            I+ N 
Sbjct: 322 DIIENA 327

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 80.7 bits (200), Expect = 7e-17
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEF-LAELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H   E K  +   E  +++ L H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------LAS 459
            V+L     +  +L     Y  NG L   L         +      +          + S
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGEL---LKY-------IRKIGSFDETCTRFYTAEIVS 141

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLT-AGTMGY 505
           AL YLH    + +IHRD+K  NI+L+ + + ++             + +   +  GT  Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 198

Query: 506 LAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP 538
           ++PE L   +A + +D+++ G ++ ++  G  P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 80.8 bits (200), Expect = 8e-17
 Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 36/202 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---------RSKHSHEGKTEFLAELSIIACLRHK 404
           + LG GA G V  A+   +    A+K          S    +       E+ I+  L H 
Sbjct: 16  KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++++  +  +  +  +V E M  G L D+++     N  L     +      +  A+ Y
Sbjct: 76  CIIKIKNFF-DAEDYYIVLELMEGGELFDKVV----GNKRLKEATCK-LYFYQMLLAVQY 129

Query: 464 LHQECEQQVIHRDIKASNIMLDANF-NARL------------ESSFTLTA-GTMGYLAPE 509
           LH   E  +IHRD+K  N++L +   +  +            E+S   T  GT  YLAPE
Sbjct: 130 LH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186

Query: 510 YLQYGTA---TEKTDVFSYGVV 528
            L            D +S GV+
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVI 208

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 47/217 (21%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEF--LAELSIIACLRHKNLVQ 408
            +LG G++G V +   + +    AVK   + K       E     E+ ++  LRHKN++Q
Sbjct: 11  DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 409 LLG--WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------LASA 460
           L+   +  EK ++ +V EY   G  +  +              R  +         L   
Sbjct: 71  LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEK-------RFPVCQAHGYFCQLIDG 121

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA---------------GTMGY 505
           L YLH    Q ++H+DIK  N++L      ++ S+  +                 G+  +
Sbjct: 122 LEYLHS---QGIVHKDIKPGNLLLTTGGTLKI-SALGVAEALHPFAADDTCRTSQGSPAF 177

Query: 506 LAPEYLQ----YGTATEKTDVFSYGVVVLEVACGRRP 538
             PE       +     K D++S GV +  +  G  P
Sbjct: 178 QPPEIANGLDTFSGF--KVDIWSAGVTLYNITTGLYP 212

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 80.3 bits (199), Expect = 1e-16
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 28/199 (14%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  VYK     + ++ A+K  +  HE      A  E+S++  L+H N+V L    
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +  L LV+EY+     D   Y D   G +++ ++    +  L   L Y H+   Q+V+
Sbjct: 70  HTEKSLTLVFEYL---DKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHR---QKVL 122

Query: 474 HRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QYGTAT 517
           HRD+K  N++++       A+F  AR +S     +     T+ Y  P+ L     Y T  
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ- 181

Query: 518 EKTDVFSYGVVVLEVACGR 536
              D++  G +  E+A GR
Sbjct: 182 --IDMWGVGCIFYEMATGR 198

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 81.4 bits (201), Expect = 2e-16
 Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 43/216 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA-ELSIIACLRHKNLVQL 409
             LG G FG V       +G   AVK   R K         +  E+  +   RH ++++L
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 410 LGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALT 462
               +   ++ +V EY+  G L D +     +NG       RL+          + S + 
Sbjct: 82  YQVISTPSDIFMVMEYVSGGELFDYI----CKNG-------RLDEKESRRLFQQILSGVD 130

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYLAPEY 510
           Y H+     V+HRD+K  N++LDA+ NA++ + F L+             G+  Y APE 
Sbjct: 131 YCHR---HMVVHRDLKPENVLLDAHMNAKI-ADFGLSNMMSDGEFLRTSCGSPNYAAPEV 186

Query: 511 LQ---YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           +    Y     + D++S GV++  + CG  P + + 
Sbjct: 187 ISGRLYAGP--EVDIWSSGVILYALLCGTLPFDDDH 220

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 46/218 (21%), Positives = 85/218 (38%), Gaps = 46/218 (21%)

Query: 355 ILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSII-ACLRHKNLVQLLGW 412
           +LG GA   V       +    AVK   K     ++    E+ ++  C  H+N+++L+ +
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79

Query: 413 CAEKGELLLVYEYMPNGSL-DRMLYQD--SENGVLLSWYHR--LNIVVGLASALTYLHQE 467
             E+    LV+E M  GS+   +  +   +E              +V  +ASAL +LH  
Sbjct: 80  FEEEDRFYLVFEKMRGGSILSHIHKRRHFNE---------LEASVVVQDVASALDFLH-- 128

Query: 468 CEQQVIHRDIKASNIML----------------------DANFNARLESSFTLTAGTMGY 505
             + + HRD+K  NI+                       + + +           G+  Y
Sbjct: 129 -NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187

Query: 506 LAPEYLQYGTATEKT-----DVFSYGVVVLEVACGRRP 538
           +APE ++  +          D++S GV++  +  G  P
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 80.5 bits (199), Expect = 3e-16
 Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 32/206 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSII-ACLRHKNLVQLLG 411
           ++LG G  G V + +   +    A+K         +     E+ +     +  ++V+++ 
Sbjct: 68  QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCPHIVRIVD 122

Query: 412 WC----AEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
                 A +  LL+V E +  G L  R+  +  +     +      I+  +  A+ YLH 
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLH- 178

Query: 467 ECEQQVIHRDIKASNIML-DANFNARL-------------ESSFTLTAGTMGYLAPEYLQ 512
                + HRD+K  N++      NA L              +S T    T  Y+APE L 
Sbjct: 179 --SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 236

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRP 538
                +  D++S GV++  + CG  P
Sbjct: 237 PEKYDKSCDMWSLGVIMYILLCGYPP 262

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 79.7 bits (197), Expect = 5e-16
 Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 44/227 (19%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
            RE +Y   +          ++G G+FG V++A    S  V A+K+       K     E
Sbjct: 37  QREIAYTNCK----------VIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFK---NRE 82

Query: 395 LSIIACLRHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  ++H N+V L       G   ++  L LV EY+P  ++ R     ++    +   
Sbjct: 83  LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPML 141

Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---------AR-LESSFTL 498
                +  L  +L Y+H      + HRDIK  N++LD             A+ L +    
Sbjct: 142 LIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN 198

Query: 499 TA--GTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            +   +  Y APE +     Y T     D++S G V+ E+    +P+
Sbjct: 199 VSYICSRYYRAPELIFGATNYTTN---IDIWSTGCVMAEL-MQGQPL 241

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 78.4 bits (194), Expect = 7e-16
 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 41/208 (19%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLRHKNLVQL 409
           LG G +G VYKA    +    A+KR +  H  EG        + E+S++  L+H+N+++L
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG---VPGTAIREVSLLKELQHRNIIEL 98

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                    L L++EY      D   Y D      +S     + +  L + + + H    
Sbjct: 99  KSVIHHNHRLHLIFEYA---ENDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHS--- 150

Query: 470 QQVIHRDIKASNIMLDANFN-------------ARLESS----FTLTAGTMGYLAPEYL- 511
           ++ +HRD+K  N++L  +               AR        FT    T+ Y  PE L 
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILL 210

Query: 512 ---QYGTATEKTDVFSYGVVVLEVACGR 536
               Y T+    D++S   +  E+    
Sbjct: 211 GSRHYSTS---VDIWSIACIWAEMLMKT 235

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 38/212 (17%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSI---IACLRHKNL 406
           +G GA+G VYKA    SG   A+K  +  +   G        + E+++   +    H N+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 407 VQLL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           V+L+          + ++ LV+E++     D   Y D      L      +++      L
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133

Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFN-AR---LESSFTLTAGTMGYLAPEY 510
            +LH      ++HRD+K  NI++        A+F  AR    + + T    T+ Y APE 
Sbjct: 134 DFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190

Query: 511 L---QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           L    Y T     D++S G +  E+   R+P+
Sbjct: 191 LLQSTYATP---VDMWSVGCIFAEMFR-RKPL 218

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 44/219 (20%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE---FLAELSIIACLRHKN 405
           F   +++GRGAFG V      ++  V A+K  +K     + E   F  E  ++     K 
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135

Query: 406 LVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------L 457
           +  L    A  +   L LV +Y   G L  +L +            RL   +       +
Sbjct: 136 ITTL--HYAFQDDNNLYLVMDYYVGGDLLTLLSKFE---------DRLPEEMARFYLAEM 184

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTA-GTMG 504
             A+  +HQ      +HRDIK  NI++D N + RL             +  +  A GT  
Sbjct: 185 VIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 241

Query: 505 YLAPEYLQYGTATEKT-----DVFSYGVVVLEVACGRRP 538
           Y++PE LQ     +       D +S GV + E+  G  P
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 78/247 (31%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA----------------- 393
             +G+G++G V  AY  +  +  A+K   + K   +                        
Sbjct: 19  DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78

Query: 394 -------ELSIIACLRHKNLVQLLG--WCAEKGELLLVYEYMPNGSL-D----------- 432
                  E++I+  L H N+V+L+       +  L +V+E +  G + +           
Sbjct: 79  PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138

Query: 433 -RMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-- 489
            R  +QD                  L   + YLH    Q++IHRDIK SN+++  + +  
Sbjct: 139 ARFYFQD------------------LIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIK 177

Query: 490 -------ARLESSFTL---TAGTMGYLAPEYLQYGTAT---EKTDVFSYGVVVLEVACGR 536
                     + S  L   T GT  ++APE L         +  DV++ GV +     G+
Sbjct: 178 IADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

Query: 537 RPIERET 543
            P   E 
Sbjct: 238 CPFMDER 244

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 77.2 bits (191), Expect = 2e-15
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 49/214 (22%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEF------LAELSIIACLRHKNLVQL 409
           LG G F  VYKA   ++  + A+K+ K  H  + +       L E+ ++  L H N++ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLL-----SWYHRLNIVVGLASALTYL 464
           L     K  + LV+++M     D  +     + VL      ++             L YL
Sbjct: 78  LDAFGHKSNISLVFDFME---TDLEVIIKDNSLVLTPSHIKAYMLM------TLQGLEYL 128

Query: 465 HQECEQQVIHRDIKASNIMLDANFN--------ARLESSF-----TLTAG--TMGYLAPE 509
           HQ     ++HRD+K +N++LD N          A+   SF       T    T  Y APE
Sbjct: 129 HQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRAYTHQVVTRWYRAPE 182

Query: 510 YL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            L     YG      D+++ G ++ E+   R P 
Sbjct: 183 LLFGARMYGVG---VDMWAVGCILAEL-LLRVPF 212

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 44/216 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLA-ELSIIACLRHKNLVQL 409
             LG G+FG V  A    +    A+K   R           +  E+S +  LRH ++++L
Sbjct: 15  ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 410 LGWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALT 462
                   ++++V EY   G L D +     E         R+    G      +  A+ 
Sbjct: 75  YDVITTPTDIVMVIEYA-GGELFDYI----VEKK-------RMTEDEGRRFFQQIICAIE 122

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTA------------GTMGYLAPEY 510
           Y H+    +++HRD+K  N++LD N N ++ + F L+             G+  Y APE 
Sbjct: 123 YCHR---HKIVHRDLKPENLLLDDNLNVKI-ADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178

Query: 511 LQ---YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           +    Y     + DV+S G+V+  +  GR P + E 
Sbjct: 179 INGKLYAGP--EVDVWSCGIVLYVMLVGRLPFDDEF 212

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 77.4 bits (191), Expect = 2e-15
 Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 51/221 (23%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE---FLAELSIIACLRHKN 405
           +   +++GRGAFG V      S+  V A+K  SK     +++   F  E  I+A      
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130

Query: 406 LVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------L 457
           +VQL  + A  +   L +V EYMP G L  ++             + +           +
Sbjct: 131 VVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEV 177

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTA-GTMG 504
             AL  +H       IHRD+K  N++LD + + +L                  TA GT  
Sbjct: 178 VLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234

Query: 505 YLAPEYLQ-------YGTATEKTDVFSYGVVVLEVACGRRP 538
           Y++PE L+       YG      D +S GV + E+  G  P
Sbjct: 235 YISPEVLKSQGGDGYYGRE---CDWWSVGVFLYEMLVGDTP 272

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 54/216 (25%), Positives = 79/216 (36%), Gaps = 45/216 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G G FG         +  + AVK   R     E   +   E+     LRH N+V+  
Sbjct: 26  KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE-NVQ--REIINHRSLRHPNIVRFK 82

Query: 411 GWCAEKGELLLVYEYMPNGSL-DRMLYQDSENGVLLSWYHRLNIVVG------LASALTY 463
                   L ++ EY   G L +R+       G       R +          L S ++Y
Sbjct: 83  EVILTPTHLAIIMEYASGGELYERI----CNAG-------RFSEDEARFFFQQLLSGVSY 131

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARLE-SSFTLTA------------GTMGYLAPEY 510
            H     Q+ HRD+K  N +LD +   RL+   F  +             GT  Y+APE 
Sbjct: 132 CHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 188

Query: 511 LQ---YGTATEKTDVFSYGVVVLEVACGRRPIERET 543
           L    Y       DV+S GV +  +  G  P E   
Sbjct: 189 LLRQEYDGK--IADVWSCGVTLYVMLVGAYPFEDPE 222

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 74.9 bits (183), Expect = 4e-15
 Identities = 37/232 (15%), Positives = 69/232 (29%), Gaps = 33/232 (14%)

Query: 28  DFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTS 87
              S ++      G + L +  + LT +     S  GS+  + P             +  
Sbjct: 18  GVGSSSMPLWDFQGSTILTSQYVRLTPD---ERSKEGSIWNHQPCFL--------KDWEM 66

Query: 88  RFSFSINNVNPSS-FGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLD 146
              F ++     +  GDG+A + + D  + G   G     +         +AI  DT  +
Sbjct: 67  HVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHG--------LAIFLDTYPN 118

Query: 147 PHFDDPDENHIGLDI--DSLESIKTADPILQGID------LKSGNVITAWIDYKNDLRML 198
               +    +I + +   SL    + D     +           +     + Y      L
Sbjct: 119 DETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRG--RL 176

Query: 199 KVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
            V     +       + +       L    Y G SA T   ++ H I S   
Sbjct: 177 TVMTDLEDKNEWKNCIDIT---GVRLPTGYYFGASAGTGDLSDNHDIISMKL 225

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 76.7 bits (189), Expect = 4e-15
 Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 50/232 (21%)

Query: 341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE---FLAELS 396
           +E+R     F   +++GRGAF  V       +G V A+K  +K     + E   F  E  
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113

Query: 397 IIACLRHKNLVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLS-----WYH 449
           ++     + + QL    A  ++  L LV EY   G L   L   S+ G  +      +Y 
Sbjct: 114 VLVNGDRRWITQL--HFAFQDENYLYLVMEYYVGGDL---LTLLSKFGERIPAEMARFY- 167

Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFT 497
               +  +  A+  +H+      +HRDIK  NI+LD   + RL             +  +
Sbjct: 168 ----LAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220

Query: 498 LTA-GTMGYLAPEYLQ----------YGTATEKTDVFSYGVVVLEVACGRRP 538
           L A GT  YL+PE LQ          YG      D ++ GV   E+  G+ P
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPE---CDWWALGVFAYEMFYGQTP 269

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 75.3 bits (186), Expect = 5e-15
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 31/203 (15%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA--ELSIIACLRHKNLVQLLGWC 413
           LG G +  VYK    ++G   A+K  K   E  T   A  E+S++  L+H+N+V+L    
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG----LASALTYLHQECE 469
             + +L LV+E+M     D   Y DS           LN+V      L   L + H+   
Sbjct: 73  HTENKLTLVFEFM---DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE--- 126

Query: 470 QQVIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QY 513
            +++HRD+K  N++++        +F  AR        F+    T+ Y AP+ L     Y
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186

Query: 514 GTATEKTDVFSYGVVVLEVACGR 536
            T+    D++S G ++ E+  G+
Sbjct: 187 STS---IDIWSCGCILAEMITGK 206

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 75.0 bits (185), Expect = 9e-15
 Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 29/219 (13%)

Query: 344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH 403
           R     F   R+ G+G FG V      S+G   A+K+       +   L  +  +A L H
Sbjct: 19  RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH 78

Query: 404 KNLVQLL-----GWCAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
            N+VQL          ++ +  L +V EY+P+ +L R         V          +  
Sbjct: 79  PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQ 137

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFN---------AR-LESSFTLTA--GTMG 504
           L  ++  LH      V HRDIK  N++++             A+ L  S    A   +  
Sbjct: 138 LIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196

Query: 505 YLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           Y APE +     Y TA    D++S G +  E+     PI
Sbjct: 197 YRAPELIFGNQHYTTA---VDIWSVGCIFAEM-MLGEPI 231

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 74.6 bits (184), Expect = 2e-14
 Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 40/212 (18%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           F   + LG G+FG V       SG+  A+K        K +     L E  I+  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------LAS 459
           LV+L     +   L +V EY+  G +   L +            R +          +  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFYAAQIVL 152

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPE 509
              YLH      +I+RD+K  N+++D     ++            ++TL  GT   LAPE
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-CGTPEALAPE 208

Query: 510 YLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
            +    Y  A    D ++ GV++ E+A G  P
Sbjct: 209 IILSKGYNKA---VDWWALGVLIYEMAAGYPP 237

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 73.3 bits (181), Expect = 2e-14
 Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 36/203 (17%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLRHKNLVQL 409
           +G G +G VYKA   + G   A+K+ +     EG        + E+SI+  L+H N+V+L
Sbjct: 10  IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEG---IPSTTIREISILKELKHSNIVKL 65

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                 K  L+LV+E++     D     D   G L S     + ++ L + + Y H    
Sbjct: 66  YDVIHTKKRLVLVFEHL---DQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYCHD--- 118

Query: 470 QQVIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QY 513
           ++V+HRD+K  N++++       A+F  AR        +T    T+ Y AP+ L    +Y
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178

Query: 514 GTATEKTDVFSYGVVVLEVACGR 536
            T     D++S G +  E+  G 
Sbjct: 179 STT---IDIWSVGCIFAEMVNGT 198

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 74.4 bits (183), Expect = 3e-14
 Identities = 61/211 (28%), Positives = 87/211 (41%), Gaps = 22/211 (10%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K   K     K E    L E  ++   RH  
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L    +  S   V      R      + SAL YLH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYG-AEIVSALDYLH 265

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQY 513
              E+ V++RD+K  N+MLD + + ++           + +   T  GT  YLAPE L+ 
Sbjct: 266 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                  D +  GVV+ E+ CGR P   +  
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 354

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 48/218 (22%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLRHKNLVQL 409
           +G+G FG V+KA    +G   A+K+    +  EG   F    L E+ I+  L+H+N+V L
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG---FPITALREIKILQLLKHENVVNL 81

Query: 410 LGWCAEK--------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASAL 461
           +  C  K        G + LV+++      D      +   V  +      ++  L + L
Sbjct: 82  IEICRTKASPYNRCKGSIYLVFDFC---EHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGL 137

Query: 462 TYLHQECEQQVIHRDIKASNIMLD-------ANFN-ARL------ESSFTLTAG--TMGY 505
            Y+H+    +++HRD+KA+N+++        A+F  AR             T    T+ Y
Sbjct: 138 YYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 194

Query: 506 LAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
             PE L     YG      D++  G ++ E+   R PI
Sbjct: 195 RPPELLLGERDYGPP---IDLWGAGCIMAEM-WTRSPI 228

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 74.5 bits (183), Expect = 3e-14
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 35/215 (16%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHEGKTEFLAELSIIACL 401
            + + + + +G GA G V  AY A      A+K+        +H  +     EL ++ C+
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCV 118

Query: 402 RHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            HKN++ LL          E  ++ LV E M   +L +++  +      L       ++ 
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME------LDHERMSYLLY 171

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-AR-LESSFTLT--AGTMG 504
            +   + +LH      +IHRD+K SNI++ ++       F  AR   +SF +T    T  
Sbjct: 172 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 228

Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           Y APE +      E  D++S G ++ E+    + +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKIL 262

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 40/212 (18%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKN 405
           F   R LG G+FG V+      +G   A+K  K     + +       E  +++ + H  
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG------LAS 459
           ++++ G   +  ++ ++ +Y+  G L             L    R    V       +  
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGEL--FSL--------LRKSQRFPNPVAKFYAAEVCL 117

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPE 509
           AL YLH    + +I+RD+K  NI+LD N + ++          + ++TL  GT  Y+APE
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-CGTPDYIAPE 173

Query: 510 YLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
            +    Y  +    D +S+G+++ E+  G  P
Sbjct: 174 VVSTKPYNKS---IDWWSFGILIYEMLAGYTP 202

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 37/198 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSI-IACLRHKNLVQLLG 411
           ++LG G  G V + +   +    A+K         +     E+ +     +  ++V+++ 
Sbjct: 24  QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCPHIVRIVD 78

Query: 412 WC----AEKGELLLVYEYMPNGSL-DRMLYQD----SENGVLLSWYHRLNIVVGLASALT 462
                 A +  LL+V E +  G L  R+  +     +E            I+  +  A+ 
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA-------SEIMKSIGEAIQ 131

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLAPEYLQ--YGTATEKT 520
           YLH      + HRD+K  N++  +        +  L     G  A E     Y    +  
Sbjct: 132 YLH---SINIAHRDVKPENLLYTSK-----RPNAILKLTDFG-FAKETTGEKYD---KSC 179

Query: 521 DVFSYGVVVLEVACGRRP 538
           D++S GV++  + CG  P
Sbjct: 180 DMWSLGVIMYILLCGYPP 197

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 73.1 bits (180), Expect = 5e-14
 Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 36/215 (16%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHEGKTEFLAELSIIACL 401
            + + S   +G GA+G+V  A    SG   A+K+            +     EL ++  +
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHM 80

Query: 402 RHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +H+N++ LL             +  LV  +M    L +++          S      +V 
Sbjct: 81  QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLK------FSEEKIQYLVY 133

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSFTLTA--GTMGY 505
            +   L Y+H      V+HRD+K  N+ ++ +       F  AR   +  +T    T  Y
Sbjct: 134 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA-EMTGYVVTRWY 189

Query: 506 LAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
            APE  L +    +  D++S G ++ E+    + +
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTL 223

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 72.2 bits (178), Expect = 5e-14
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 36/203 (17%)

Query: 356 LGRGAFGNVYKAYFASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLRHKNLVQL 409
           +G G +G VYKA   S G + A+KR +     EG        + E+S++  L H N+V L
Sbjct: 29  VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEG---IPSTAIREISLLKELHHPNIVSL 84

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
           +     +  L LV+E+M     D     D     L         +  L   + + HQ   
Sbjct: 85  IDVIHSERCLTLVFEFME---KDLKKVLDENKTGLQD-SQIKIYLYQLLRGVAHCHQ--- 137

Query: 470 QQVIHRDIKASNIMLD-------ANFN-ARLESS----FTLTAGTMGYLAPEYL----QY 513
            +++HRD+K  N++++       A+F  AR        +T    T+ Y AP+ L    +Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197

Query: 514 GTATEKTDVFSYGVVVLEVACGR 536
            T+    D++S G +  E+  G+
Sbjct: 198 STS---VDIWSIGCIFAEMITGK 217

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 73.3 bits (180), Expect = 5e-14
 Identities = 45/215 (20%), Positives = 83/215 (38%), Gaps = 39/215 (18%)

Query: 356 LGRGAFGNVYKAYFAS--SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           +GRG +G+VYKA           A+K+ + +    +    E++++  L+H N++ L    
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA-CREIALLRELKHPNVISLQKVF 87

Query: 414 AEKGE--LLLVYEYMPN---GSLDRMLYQDSEN-GVLLSWYHRLNIVVGLASALTYLHQE 467
               +  + L+++Y  +     +       +    V L      +++  +   + YLH  
Sbjct: 88  LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA- 146

Query: 468 CEQQVIHRDIKASNIMLDANFNAR---------LESSF-----TLTAG-----TMGYLAP 508
               V+HRD+K +NI++      R             F      L        T  Y AP
Sbjct: 147 --NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204

Query: 509 EYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
           E L     Y  A    D+++ G +  E+     PI
Sbjct: 205 ELLLGARHYTKA---IDIWAIGCIFAEL-LTSEPI 235

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 72.8 bits (179), Expect = 7e-14
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 35/215 (16%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHEGKTEFLAELSIIACL 401
            + + + + +G GA G V  AY A      A+K+        +H  +     EL ++ C+
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCV 81

Query: 402 RHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            HKN++ LL          E  ++ +V E M   +L +++  +      L       ++ 
Sbjct: 82  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME------LDHERMSYLLY 134

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR-LESSFTLT--AGTMG 504
            +   + +LH      +IHRD+K SNI++ ++          AR   +SF +T    T  
Sbjct: 135 QMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191

Query: 505 YLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           Y APE +      E  D++S G ++ E+      +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVL 225

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 70.7 bits (174), Expect = 3e-13
 Identities = 63/217 (29%), Positives = 91/217 (41%), Gaps = 35/217 (16%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K   K     K E    + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALT 462
           L  L         L  V EY   G L   L ++   +E       Y        + SAL 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF--Y-----GAEIVSALE 119

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEY 510
           YLH    + V++RDIK  N+MLD + + ++           + +   T  GT  YLAPE 
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176

Query: 511 LQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           L+   YG A    D +  GVV+ E+ CGR P   +  
Sbjct: 177 LEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDH 210

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 70.4 bits (173), Expect = 3e-13
 Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 33/214 (15%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACL 401
              + +   +G GA+G+V  A+   +G   AVK  K S   ++   A     EL ++  +
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM 85

Query: 402 RHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           +H+N++ LL          E  ++ LV   M    L+ ++         L+  H   ++ 
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQK-----LTDDHVQFLIY 139

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSF-TLTAGTMGYL 506
            +   L Y+H      +IHRD+K SN+ ++ +       F  AR  +   T    T  Y 
Sbjct: 140 QILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYR 196

Query: 507 APE-YLQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           APE  L +    +  D++S G ++ E+    R +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTL 229

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 69.9 bits (172), Expect = 4e-13
 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 41/215 (19%)

Query: 350 FHSNRILGRGAFGNVY---KAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRH 403
           F   ++LG+G+FG V+   K   + +  + A+K  K +      +     E  I+  + H
Sbjct: 26  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85

Query: 404 KNLVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLA 458
             +V+L    A   +G+L L+ +++  G L   L ++   +E  V    Y     +  LA
Sbjct: 86  PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF--Y-----LAELA 136

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYL 506
            AL +LH      +I+RD+K  NI+LD   + +L                 +  GT+ Y+
Sbjct: 137 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193

Query: 507 APEYLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
           APE +    +  +    D +S+GV++ E+  G  P
Sbjct: 194 APEVVNRRGHTQS---ADWWSFGVLMFEMLTGTLP 225

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 69.9 bits (172), Expect = 4e-13
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 42/213 (19%)

Query: 356 LGRGAFGNVYKAY-FASSGSVAAVKRSK--HSHEGKTEF----LAELSIIACLR---HKN 405
           +G GA+G V+KA    + G   A+KR +     EG        + E++++  L    H N
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPN 75

Query: 406 LVQLL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA 460
           +V+L           + +L LV+E++     D   Y D      +      +++  L   
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132

Query: 461 LTYLHQECEQQVIHRDIKASNIMLD-------ANFN-AR---LESSFTLTAGTMGYLAPE 509
           L +LH     +V+HRD+K  NI++        A+F  AR    + + T    T+ Y APE
Sbjct: 133 LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189

Query: 510 YL---QYGTATEKTDVFSYGVVVLEVACGRRPI 539
            L    Y T     D++S G +  E+   R+P+
Sbjct: 190 VLLQSSYATP---VDLWSVGCIFAEMFR-RKPL 218

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 70.0 bits (172), Expect = 4e-13
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 33/214 (15%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACL 401
              +   + +G GA+G V  A    +G+  A+K  K     ++E  A     EL ++  +
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHM 81

Query: 402 RHKNLVQLL------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
           RH+N++ LL          +  +  LV  +M    L +++  +      L       +V 
Sbjct: 82  RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEK-----LGEDRIQFLVY 135

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSF-TLTAGTMGYL 506
            +   L Y+H      +IHRD+K  N+ ++ +       F  AR   S  T    T  Y 
Sbjct: 136 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYR 192

Query: 507 APEY-LQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           APE  L +   T+  D++S G ++ E+    + +
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTL 225

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 70.4 bits (172), Expect = 8e-13
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 24/212 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIAC-LRHK 404
           F+   +LG+G+FG V  +    +  + AVK  K       +     + E  ++A   +  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            L QL         L  V EY+  G L   +Y   + G     +        +A  L +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVF-YAAEIAIGLFFL 458

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ 512
                + +I+RD+K  N+MLD+  + ++           +   T T  GT  Y+APE + 
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA 515

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           Y    +  D +++GV++ E+  G+ P E E E
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 68.4 bits (168), Expect = 1e-12
 Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 34/205 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLG- 411
           R LGRG +  V++A   ++     VK  K   + K     E+ I+  LR   N++ L   
Sbjct: 42  RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI--KREIKILENLRGGPNIITLADI 99

Query: 412 -WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                     LV+E++ N    + LYQ       L+ Y     +  +  AL Y H     
Sbjct: 100 VKDPVSRTPALVFEHVNNTDFKQ-LYQT------LTDYDIRFYMYEILKALDYCHS---M 149

Query: 471 QVIHRDIKASNIMLDANFN---------ARL---ESSFTLTAGTMGYLAPE----YLQYG 514
            ++HRD+K  N+M+D             A        + +   +  +  PE    Y  Y 
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209

Query: 515 TATEKTDVFSYGVVVLEVACGRRPI 539
            +    D++S G ++  +   + P 
Sbjct: 210 YS---LDMWSLGCMLASMIFRKEPF 231

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 36/214 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAA--VKRSKHSHEGKTEF---------LAELSIIACLR 402
           R +  G++G V     +    VA   V  +                   L E+ ++    
Sbjct: 28  RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87

Query: 403 HKNLVQLL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
           H N++ L             +L LV E M    L ++++      +++S  H    +  +
Sbjct: 88  HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD---QRIVISPQHIQYFMYHI 143

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-AR-LESSFTLTA--GTMGYL 506
              L  LH   E  V+HRD+   NI+L  N       FN AR   +    T       Y 
Sbjct: 144 LLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYR 200

Query: 507 APEY-LQYGTATEKTDVFSYGVVVLEVACGRRPI 539
           APE  +Q+   T+  D++S G V+ E+   R+ +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQ 408
            ++G G++G+V +AY      V A+K  K     +          E++I+  L H ++V+
Sbjct: 59  HLIGTGSYGHVCEAYDKLEKRVVAIK--KILRVFEDLIDCKRILREIAILNRLNHDHVVK 116

Query: 409 LL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           +L         +  EL +V E       D    +     V L+  H   ++  L   + Y
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIA-----DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY 171

Query: 464 LHQECEQQVIHRDIKASNIMLDAN 487
           +H      ++HRD+K +N +++ +
Sbjct: 172 VH---SAGILHRDLKPANCLVNQD 192

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 65/240 (27%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLL--- 410
           + LG G+FG V + +   SG   A+K  K   + + +   EL I+  L H N+++L+   
Sbjct: 13  KTLGTGSFGIVCEVFDIESGKRFALK--KVLQDPRYK-NRELDIMKVLDHVNIIKLVDYF 69

Query: 411 -----------------------------------GWCAEKGELLLVYEYMPNGSLDRML 435
                                                 ++   L ++ EY+P+ +L ++L
Sbjct: 70  YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVL 128

Query: 436 YQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN------ 489
                +G  +        +  L  A+ ++H      + HRDIK  N+++++  N      
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCD 185

Query: 490 ---AR-LESSFTLTA--GTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              A+ L  S    A   +  Y APE +    +Y  +    D++S G V  E+    +P+
Sbjct: 186 FGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPS---IDLWSIGCVFGEL-ILGKPL 241

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 67.2 bits (165), Expect = 3e-12
 Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVK--RSKHSHEGKTEF---LAELSIIACLRHKN 405
           R+LG+G +G V+   K   A++G + A+K  +         +     AE +I+  ++H  
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82

Query: 406 LVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASA 460
           +V L+   A    G+L L+ EY+  G L   L ++    E+      Y     +  ++ A
Sbjct: 83  IVDLI--YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF--Y-----LAEISMA 133

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAP 508
           L +LH   ++ +I+RD+K  NIML+   + +L           + + T T  GT+ Y+AP
Sbjct: 134 LGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190

Query: 509 EYLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
           E L    +  A    D +S G ++ ++  G  P
Sbjct: 191 EILMRSGHNRA---VDWWSLGALMYDMLTGAPP 220

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 65.3 bits (160), Expect = 1e-11
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 30/215 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGK--TEFLAELSIIA-CLRHK 404
           F   R+LG+G+FG V  A    +G + AVK  +     +       + E  I++    H 
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            L QL         L  V E++  G L   ++   ++        R      + SAL +L
Sbjct: 85  FLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARF-YAAEIISALMFL 140

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ 512
           H   ++ +I+RD+K  N++LD   + +L               T T  GT  Y+APE LQ
Sbjct: 141 H---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ 197

Query: 513 ---YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
              YG A    D ++ GV++ E+ CG  P E E E
Sbjct: 198 EMLYGPA---VDWWAMGVLLYEMLCGHAPFEAENE 229

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 52/223 (23%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + LG G  G V+ A         A+K+   +          L E+ II  L H N+V++ 
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA--LREIKIIRRLDHDNIVKVF 74

Query: 411 --------------GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVG 456
                         G   E   + +V EYM    L  +L Q       L   H    +  
Sbjct: 75  EILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGP-----LLEEHARLFMYQ 128

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDAN--------FN-ARLESSFTLTAGTMG--- 504
           L   L Y+H      V+HRD+K +N+ ++          F  AR+        G +    
Sbjct: 129 LLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185

Query: 505 ----YLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
               Y +P  L     Y  A    D+++ G +  E+    + +
Sbjct: 186 VTKWYRSPRLLLSPNNYTKA---IDMWAAGCIFAEML-TGKTL 224

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 37/218 (16%)

Query: 347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLR 402
              + +   +G GA+G V  AY   +    A+K+       ++  +T  L E+ I+   R
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 83

Query: 403 HKNLVQLL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGL 457
           H+N++ +          +  ++ +V + M    L ++L         LS  H    +  +
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH-----LSNDHICYFLYQI 137

Query: 458 ASALTYLHQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSFTLTAGTMG----- 504
              L Y+H      V+HRD+K SN++L+         F  AR+        G +      
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194

Query: 505 --YLAPEY-LQYGTATEKTDVFSYGVVVLEVACGRRPI 539
             Y APE  L     T+  D++S G ++ E+    RPI
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPI 231

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIAC-LRHK 404
           F+   +LG+G+FG V  +    +  + AVK  K     + +     + E  ++A   +  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            L QL         L  V EY+  G L   +Y   + G     +        +A  L +L
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVF-YAAEIAIGLFFL 137

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ 512
                + +I+RD+K  N+MLD+  + ++           +   T T  GT  Y+APE + 
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA 194

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           Y    +  D +++GV++ E+  G+ P E E E
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 63.8 bits (156), Expect = 5e-11
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 28/214 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIA-CLRHK 404
           F  +++LG+G+FG V+ A F  +    A+K   K       +    + E  +++    H 
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 405 NLVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
            L  +  +C    K  L  V EY+  G L   +Y                    +   L 
Sbjct: 79  FLTHM--FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATF-YAAEIILGLQ 132

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEY 510
           +LH    + +++RD+K  NI+LD + + ++             + T T  GT  Y+APE 
Sbjct: 133 FLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 189

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
           L         D +S+GV++ E+  G+ P   + E
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 64.0 bits (156), Expect = 5e-11
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLA-----ELSIIACLRHKNLVQ 408
            ++GRG++G VY AY  ++    A+K  K +   +          E++I+  L+   +++
Sbjct: 32  HLIGRGSYGYVYLAYDKNTEKNVAIK--KVNRMFEDLIDCKRILREITILNRLKSDYIIR 89

Query: 409 LL-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
           L          +  EL +V E       D  L +  +  + L+  H   I+  L     +
Sbjct: 90  LYDLIIPDDLLKFDELYIVLEIA-----DSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144

Query: 464 LHQECEQQVIHRDIKASNIMLDAN 487
           +H   E  +IHRD+K +N +L+ +
Sbjct: 145 IH---ESGIIHRDLKPANCLLNQD 165

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 63.0 bits (154), Expect = 8e-11
 Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 24/206 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGK--TEFLAELSIIA-CLRHK 404
           F   R++GRG++  V       +  + A+K  + +  ++ +       E  +      H 
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            LV L      +  L  V EY+  G L   ++       L   + R      ++ AL YL
Sbjct: 71  FLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALNYL 126

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPEYLQ 512
           H   E+ +I+RD+K  N++LD+  + +L               T T  GT  Y+APE L+
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 183

Query: 513 YGTATEKTDVFSYGVVVLEVACGRRP 538
                   D ++ GV++ E+  GR P
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSP 209

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 63.1 bits (154), Expect = 9e-11
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 47/224 (20%)

Query: 354 RILGRGAFGNVY---KAYFASSGSVAAVKR-SKHSHEGKTEF----LAELSIIACLRHKN 405
           ++LG GA+G V+   K     +G + A+K   K +   K +       E  ++  +R   
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119

Query: 406 -LVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLAS 459
            LV L    A   + +L L+ +Y+  G L   L Q    +E+ V    Y     V  +  
Sbjct: 120 FLVTL--HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV--QIY-----VGEIVL 170

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLT-AGTMGYL 506
           AL +LH   +  +I+RDIK  NI+LD+N +  L            E+       GT+ Y+
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227

Query: 507 APEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEG 545
           AP+ ++     +  A    D +S GV++ E+  G  P   + E 
Sbjct: 228 APDIVRGGDSGHDKA---VDWWSLGVLMYELLTGASPFTVDGEK 268

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 63.1 bits (154), Expect = 1e-10
 Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 30/209 (14%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGK--TEFLAELSIIA-CLRHK 404
           F   R++GRG++  V       +  + A++  + +  ++ +       E  +      H 
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASAL 461
            LV L      +  L  V EY+  G L   + +     E       Y        ++ AL
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--Y-----SAEISLAL 166

Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLAPE 509
            YLH   E+ +I+RD+K  N++LD+  + +L               T T  GT  Y+APE
Sbjct: 167 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223

Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRP 538
            L+        D ++ GV++ E+  GR P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 252

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 58/225 (25%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKNLVQL 409
            +LG GA+G V  A    +G + A+K+     K     +T  L E+ I+   +H+N++ +
Sbjct: 17  SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFKHENIITI 74

Query: 410 L-----GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL----LSWYHRLNIVVGLASA 460
                        E+ ++ E M        L++     V+    LS  H    +     A
Sbjct: 75  FNIQRPDSFENFNEVYIIQELM-----QTDLHR-----VISTQMLSDDHIQYFIYQTLRA 124

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDAN-------FN-ARLESSFTLTAG----------- 501
           +  LH      VIHRD+K SN+++++N       F  AR+                    
Sbjct: 125 VKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181

Query: 502 ---TMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPI 539
              T  Y APE +    +Y  A    DV+S G ++ E+   RRPI
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRA---MDVWSCGCILAELF-LRRPI 222

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 40/214 (18%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEF---LAELSIIA-CLRHK 404
           FH  +++G+G+FG V  A   +     AVK   K +   K E    ++E +++   ++H 
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99

Query: 405 NLVQLLGWCA--EKGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLAS 459
            LV L    +     +L  V +Y+  G L   L ++    E       Y        +AS
Sbjct: 100 FLVGLH--FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF--Y-----AAEIAS 150

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLT-AGTMGYLA 507
           AL YLH      +++RD+K  NI+LD+  +  L            +S T T  GT  YLA
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLA 207

Query: 508 PEYLQ---YGTATEKTDVFSYGVVVLEVACGRRP 538
           PE L    Y       D +  G V+ E+  G  P
Sbjct: 208 PEVLHKQPYDRT---VDWWCLGAVLYEMLYGLPP 238

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 41/216 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR----------- 402
           R LG G F  V+ A    + +  A+K  +           E+ ++  +            
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84

Query: 403 HKNLVQLLGWCAEKGE----LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
             ++++LL     KG     +++V+E +   +L  ++ +    G+ L +  +  I   L 
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ--ISKQLL 141

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------------FTLTAGTM 503
             L Y+H+ C   +IH DIK  N++++   +                     +T +  T 
Sbjct: 142 LGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199

Query: 504 GYLAPE---YLQYGTATEKTDVFSYGVVVLEVACGR 536
            Y +PE      +G      D++S   ++ E+  G 
Sbjct: 200 EYRSPEVLLGAPWGCG---ADIWSTACLIFELITGD 232

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 57.2 bits (137), Expect = 6e-09
 Identities = 41/238 (17%), Positives = 74/238 (31%), Gaps = 54/238 (22%)

Query: 334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVK-------------R 380
           GP  FS+      T        +G G FG V++    +  +  A+K              
Sbjct: 9   GPVPFSHC---LPTEKLQRCEKIGEGVFGEVFQTI--ADHTPVAIKIIAIEGPDLVNGSH 63

Query: 381 SKHSHEGKTEF-----LAELSIIACLRHKNLVQLLGWCAEKG----ELLLVYEYMP--NG 429
            K   E   E      L+ LS   C R +  + L      +G     LL  +++     G
Sbjct: 64  QKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKG 123

Query: 430 SLDRMLYQDSENGV-------------------LLSWYHRLNIVVGLASALTYLHQECEQ 470
           S +       ++ +                   L S     +I+  L ++L         
Sbjct: 124 SANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL-- 181

Query: 471 QVIHRDIKASNIMLDANFNARLESSF---TLTAGTMGYLAPEYLQYGTATEKTDVFSY 525
           +  HRD+   N++L      +L  +    + T  + G      + Y  +  + D    
Sbjct: 182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVS-IIDYTLSRLERDGIVV 238

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 29/203 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK------NLV 407
           +++G+G+FG V KAY        A+K  ++      +   E+ I+  LR +      N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            +L     +  + + +E + + +L  ++ ++   G  L    +      +   L  LH+ 
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALHK- 218

Query: 468 CEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAGTMGYL------APE---YLQY 513
              ++IH D+K  NI+L     + ++     SS         Y+      APE     +Y
Sbjct: 219 --NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARY 276

Query: 514 GTATEKTDVFSYGVVVLEVACGR 536
           G      D++S G ++ E+  G 
Sbjct: 277 GMP---IDMWSLGCILAELLTGY 296

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 211 TPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
           +  L   + L   +   + +GFSA+T      H + SWSF + 
Sbjct: 3   SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSE 45

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 54.7 bits (132), Expect = 4e-08
 Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 35/211 (16%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRH-- 403
           +  + ++G+G+FG V KAY        A+K    +    ++ +     E+ ++  +    
Sbjct: 56  YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI----EVRLLELMNKHD 111

Query: 404 ----KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLAS 459
                 +V L      +  L LV+E + + +L  +L   +  GV L+   +      + +
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRK--FAQQMCT 168

Query: 460 ALTYLHQECEQQVIHRDIKASNIMLDANFNARLE-----SSFTLTAGTMGYL------AP 508
           AL +L    E  +IH D+K  NI+L     + ++     SS  L      Y+      +P
Sbjct: 169 ALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSP 227

Query: 509 E---YLQYGTATEKTDVFSYGVVVLEVACGR 536
           E    + Y  A    D++S G +++E+  G 
Sbjct: 228 EVLLGMPYDLA---IDMWSLGCILVEMHTGE 255

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 54.7 bits (132), Expect = 4e-08
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-----SKHSHEGKTEFLAELSIIACLR-HKNLV 407
           + LG+GA+G V+K+    +G V AVK+        +   +T    E+ I+  L  H+N+V
Sbjct: 15  KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT--FREIMILTELSGHENIV 72

Query: 408 QLLGWCAEKG--ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            LL         ++ LV++YM    L  ++  +      L   H+  +V  L   + YLH
Sbjct: 73  NLLNVLRADNDRDVYLVFDYMET-DLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLH 126

Query: 466 QECEQQVIHRDIKASNIMLDAN 487
                 ++HRD+K SNI+L+A 
Sbjct: 127 ---SGGLLHRDMKPSNILLNAE 145

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 50.7 bits (121), Expect = 8e-07
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 31/153 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR--------HKN 405
           R LG G F  V+ ++        A+K  K +       L E+ ++  +R         + 
Sbjct: 43  RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 102

Query: 406 LVQLLGWCAEKGE----LLLVYEYMPNG-SLDRMLYQDSENGVLLSWYHRL------NIV 454
           +VQLL      G     + +V+E +  G  L + + +        S Y  L       I+
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVL--GHHLLKWIIK--------SNYQGLPLPCVKKII 152

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDAN 487
             +   L YLH +C  ++IH DIK  NI+L  N
Sbjct: 153 QQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 50.4 bits (121), Expect = 9e-07
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 19/140 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRH-----K 404
           R +G G FG V       +    AVK      K++   K     E  I+  +++      
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI----EADILKKIQNDDINNN 96

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           N+V+  G       + L++E +   SL  ++ +++ NG  +         + +  AL YL
Sbjct: 97  NIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIE--DIKLYCIEILKALNYL 153

Query: 465 HQECEQQVIHRDIKASNIML 484
               +  + H D+K  NI+L
Sbjct: 154 R---KMSLTHTDLKPENILL 170

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 30/154 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVKRSKHSH-----EGKT-EFLAELSIIACLR 402
             +G+G FG +Y A   SS SV       VK     +     E K  +  A+   I    
Sbjct: 41  LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWI 100

Query: 403 HKNLVQLLG-----WCAEKGELLLVYEYM------PNGSLDRMLYQDSENGVLLSWYHRL 451
               ++ LG           +    Y +M          L ++      N    S    L
Sbjct: 101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS--DLQKIY---EANAKRFSRKTVL 155

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLD 485
            + + +   L Y+H   E + +H DIKASN++L+
Sbjct: 156 QLSLRILDILEYIH---EHEYVHGDIKASNLLLN 186

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 29/152 (19%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAA-----VKRSKHS---HEGKTE-FLAELSIIACLRHK 404
           + +G G FG +Y A+  +     A     V+  ++     E K    +A+   I     +
Sbjct: 43  KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIER 102

Query: 405 NLVQLLG-----WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNI--VVGL 457
             +  LG                Y +M    ++R L  D +   +           V+ L
Sbjct: 103 KQLDYLGIPLFYGSGLTEFKGRSYRFM---VMER-LGIDLQK--ISGQNGTFKKSTVLQL 156

Query: 458 A----SALTYLHQECEQQVIHRDIKASNIMLD 485
                  L Y+H   E + +H DIKA+N++L 
Sbjct: 157 GIRMLDVLEYIH---ENEYVHGDIKAANLLLG 185

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 21/145 (14%)

Query: 354 RILGRGAFGNVYKAY-FASSGSVAAVK--RSKHS--HEGKTEFLAELSIIACLRHK---- 404
             LG G FG V +    A   S  A+K  R+        +     E++++  ++ K    
Sbjct: 25  GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL----EINVLKKIKEKDKEN 80

Query: 405 --NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
               V +  W    G + + +E +   +    L +++     L       +   L  AL 
Sbjct: 81  KFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRH--MAYQLCHALR 137

Query: 463 YLHQECEQQVIHRDIKASNIMLDAN 487
           +LH   E Q+ H D+K  NI+   +
Sbjct: 138 FLH---ENQLTHTDLKPENILFVNS 159

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Length = 226

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 44/241 (18%), Positives = 71/241 (29%), Gaps = 41/241 (17%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
            N  + L N +        L   TL     L  G   LT       ++ GSL        
Sbjct: 7   WNKGYSLPNLLEVTDQQKELSQWTLGDKVKLEEGRFVLTP----GKNTKGSLWLKPEYSI 62

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN 134
            D       + T  ++F       S+   GLAF++   N+   +             +  
Sbjct: 63  KD-------AMTIEWTFRSFGFRGST-KGGLAFWLKQGNEGDSTE--------LFGGSSK 106

Query: 135 KF--VAIEFDTRLDPHFDDPDENHIGLDID--SLESIKTADPILQGIDLK---SGNVITA 187
           KF  + I          DD     +   ++  + +    + P       +   S    T 
Sbjct: 107 KFNGLMILLRL------DDKLGESVTAYLNDGTKDLDIESSPYFASCLFQYQDSMVPSTL 160

Query: 188 WIDY-KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQ 246
            + Y   D  +LK+ M     +      KV    S        +G SA  + S E   I 
Sbjct: 161 RLTYNPLDNHLLKLQMDN---RVCFQTRKVKFMGSSPF----RIGTSAINDASKESFEIL 213

Query: 247 S 247
            
Sbjct: 214 K 214

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 21/142 (14%)

Query: 354 RILGRGAFGNVYKAY-FASSGSVAAVK----RSKHSHEGKTEFLAELSIIACLRHK---- 404
             LG GAFG V +     + G   AVK      ++    ++    E+ ++  L       
Sbjct: 20  DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS----EIQVLEHLNTTDPNS 75

Query: 405 --NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
               VQ+L W    G + +V+E +   S    + ++      L   H   +   +  ++ 
Sbjct: 76  TFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVN 132

Query: 463 YLHQECEQQVIHRDIKASNIML 484
           +LH     ++ H D+K  NI+ 
Sbjct: 133 FLH---SNKLTHTDLKPENILF 151

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Length = 256

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 40/240 (16%), Positives = 65/240 (27%), Gaps = 49/240 (20%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
           L+  + L + +N         N      + L  G I LT       +S GSL        
Sbjct: 14  LSSDYSLPDLINTRKVP---NNWQTGEQASLEEGRIVLTS----NQNSKGSLWLKQGFDL 66

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAG---------GCLGL 125
            D       SFT  ++F            G++F+   D+ I              G   L
Sbjct: 67  KD-------SFTMEWTFRSVG-YSGQTDGGISFWFVQDSNIPRDKQLYNGPVNYDGLQLL 118

Query: 126 VNSSQLTKNKFVAIEFD-TRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNV 184
           V+++            D  +        D++     +   +S                  
Sbjct: 119 VDNNGPLGPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDS---------------SVP 163

Query: 185 ITAWIDY-KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELH 243
            T  + Y   D  +LKV +     K      KV      Y      +G +A         
Sbjct: 164 STIRVTYDLEDDNLLKVQVDN---KVCFQTRKVRFPSGSY-----RIGVTAQNGAVNNNA 215

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Length = 222

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 39/239 (16%), Positives = 66/239 (27%), Gaps = 47/239 (19%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
           L+  + L + +N         N      + L  G I LT       +S GSL        
Sbjct: 7   LSSDYSLPDLINTRKVP---NNWQTGEQASLEEGRIVLTS----NQNSKGSLWLKQGFDL 59

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN 134
            D       SFT  ++F            G++F+   D+ I                   
Sbjct: 60  KD-------SFTMEWTFRSVG-YSGQTDGGISFWFVQDSNIPRDK--------QLYNGPV 103

Query: 135 KF--VAIEFDTRLDPHFDDPDENHIGLDID----SLESIKTADPILQGIDLK---SGNVI 185
            +  + +  D       + P    +   ++     ++  K  D       +    S    
Sbjct: 104 NYDGLQLLVDN------NGPLGPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPS 157

Query: 186 TAWIDY-KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELH 243
           T  + Y   D  +LKV +     K      KV      Y      +G +A         
Sbjct: 158 TIRVTYDLEDDNLLKVQVDN---KVCFQTRKVRFPSGSY-----RIGVTAQNGAVNNNA 208

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           R +G G+FG +++     +    A+K      +       E      L     +  + + 
Sbjct: 16  RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ-LRDEYRTYKLLAGCTGIPNVYYF 74

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR---LNIVVGLA----SALTYLHQ 466
            ++G     +  +    L   L        LL    R   +  V   A    + +  +H 
Sbjct: 75  GQEGL----HNVLVIDLLGPSLED------LLDLCGRKFSVKTVAMAAKQMLARVQSIH- 123

Query: 467 ECEQQVIHRDIKASNIML 484
             E+ +++RDIK  N ++
Sbjct: 124 --EKSLVYRDIKPDNFLI 139

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 41.3 bits (97), Expect = 7e-04
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 28/153 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA--------AVKRSKHSHEGKTEF-----LAELSIIAC 400
               R   G +Y+A   S+ +          ++K          E       A+   +  
Sbjct: 48  SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNK 107

Query: 401 LRHKNLVQLLG-----WCAEKGEL--LLVYEYMPNG-SLDRMLYQDSENGVLLSWYHRLN 452
            +      LL            +    LV   +  G SL   L  D     +LS    L 
Sbjct: 108 WKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSAL--DVSPKHVLSERSVLQ 163

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLD 485
           +   L  AL +LH   E + +H ++ A NI +D
Sbjct: 164 VACRLLDALEFLH---ENEYVHGNVTAENIFVD 193

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	645
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	100.0
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	100.0
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	100.0
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	100.0
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	100.0
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	100.0
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	100.0
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	100.0
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	100.0
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	100.0
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	100.0
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	100.0
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	100.0
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	100.0
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	100.0
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	100.0
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	100.0
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	100.0
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	100.0
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	100.0
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	100.0
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	100.0
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	99.95
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.92
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.89
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.83
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.75
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.64
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.5
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.44
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.13
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.89
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.74
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.57
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.25
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.09
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.99
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.94
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.79
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.6
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.59
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.47
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.22
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.79
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.65
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.42
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.33
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.32
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.03
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.01
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.99
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.96
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.55
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.37
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	92.49
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.11
3mes_A	424	Choline kinase; malaria, structural genomics, stru	89.72
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	88.29
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	86.2
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	84.51

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=100.00  E-value=2.1e-63  Score=498.05  Aligned_cols=237  Identities=32%  Similarity=0.517  Sum_probs=205.7

Q ss_pred             HHHHHHhh-cccCCceeEEeCCCCCCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEE
Q 041096           11 SIFLLNFS-FVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFT   86 (645)
Q Consensus        11 ~~~~~~~~-~~~~~~~~f~~~~f~~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~   86 (645)
                      ++||+++. ...+..++|+|++|+..||+|+|||.+.+|.|+||+.+..   ..+++|||+|++||+|||+++|+++||+
T Consensus        12 ~~fl~l~~~~~sa~~~sF~f~~F~~~nL~l~GdA~i~~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFs   91 (281)
T 3ujo_A           12 VLFLILLTKAASANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWA   91 (281)
T ss_dssp             ------------CEEEEEEESSCCSTTEEECSSCCCBTTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEE
T ss_pred             HHHHHHHcccCcCCcceEEcCCCCccCEEEecceEEeCCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEE
Confidence            34444443 3446789999999999999999999999999999997432   1358999999999999999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcc
Q 041096           87 SRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLE  165 (645)
Q Consensus        87 t~F~f~i~~~~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~  165 (645)
                      |+|+|.|.+++...+||||||||+|.+..+++.||||||+|.++ ++.+|+|||||||++|++| ||++|||||||||+.
T Consensus        92 TsFsF~I~~~~~~~~gdGlAF~laP~~~~p~~~gg~LGL~n~~~~~~~n~~vAVEFDT~~N~e~-Dp~~nHVGIDvNSi~  170 (281)
T 3ujo_A           92 TSFTFNLQAPNAASPADGLAFALVPVGSQPKDKGGFLGLFDSKNYASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIK  170 (281)
T ss_dssp             EEEEEECCCSSTTSCCEEEEEEEEETTCCCCCCGGGTTTCSCSSCCTTSCCEEEEECCSCCCSS-CCSSSEEEEEESSSC
T ss_pred             EEEEEEEecCCCCCCCCceEEEEecCCCCCCCCcceeeeccccCCCccCcEEEEEEeccccccC-CCCCCeEEEEcCCCC
Confidence            99999999887788999999999999876678899999998764 4558999999999999988 999999999999999


Q ss_pred             cccccCCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC---ccce
Q 041096          166 SIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG---STEL  242 (645)
Q Consensus       166 s~~~~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~---~~~~  242 (645)
                      |.++.+|     ++.+|+.++|||+||+.+++|+|+|++.+. +..|+|+..|||+++|||+||||||||||.   ..|.
T Consensus       171 S~~t~~~-----~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~-~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~~~e~  244 (281)
T 3ujo_A          171 SIKTTSW-----DFANGENAEVLITYDSSTNLLVASLVHPSQ-KTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGYVET  244 (281)
T ss_dssp             CSCEEEC-----CCCSSCCEEEEEEECTTTCEEEEEEECTTT-CCCEEEEEECCSTTTSCSEEEEEEEEEECSSTTSCCC
T ss_pred             ccccccc-----cccCCCEEEEEEEEeCCCCEEEEEEecCCC-CCCceEEEEechHHhccCcEEEEEEeecCCCCcccce
Confidence            9998876     467899999999999999999999997663 558899999999999999999999999996   5899


Q ss_pred             eeeeeeeeeecC
Q 041096          243 HMIQSWSFQTSG  254 (645)
Q Consensus       243 ~~i~sw~f~~~~  254 (645)
                      |+|++|+|++..
T Consensus       245 H~IlsWSFss~l  256 (281)
T 3ujo_A          245 NEVLSWSFASKL  256 (281)
T ss_dssp             CEEEEEEEEEEE
T ss_pred             eEEEEEEEEEEc
Confidence            999999999863

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=100.00  E-value=6.2e-62  Score=482.44  Aligned_cols=226  Identities=36%  Similarity=0.547  Sum_probs=205.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      ..++|+|++|.  ..||+|+|||.+ .+|.|+||+.+..   ..+++|||+|++||+|||+++|+++||+|+|+|.|.++
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~GdA~v~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~   81 (251)
T 3ipv_A            2 EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAP   81 (251)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             cceEEEeCCCCCCCCCeEEeccEEecCCCeEEcCCCCCCCcccCCcEEEEEECCCEEeecCCCCceeeEEEEEEEEEeCC
Confidence            46899999998  789999999999 6899999997432   13489999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCcc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQ  175 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~  175 (645)
                      +...+||||||||+|....++..||||||+|.++ +..+|+|||||||++|.+|+||++|||||||||+.|.++.+|   
T Consensus        82 ~~~~~gdGlAF~lap~~~~~~~~gg~LGL~n~~~~~~~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNsi~S~~t~~~---  158 (251)
T 3ipv_A           82 NIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKW---  158 (251)
T ss_dssp             STTSCCEEEEEEEEETTCCCCCCGGGTTTCSSSSCCTTSCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC---
T ss_pred             CCCCCCCceEEEEecCCCCCCCCCceeeeccccCCCccCcEEEEEEecccccccCCCCCCeEEEEcCCCccccccee---
Confidence            7788999999999999876667899999998764 345899999999999999999999999999999999998875   


Q ss_pred             ccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeee
Q 041096          176 GIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQT  252 (645)
Q Consensus       176 ~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~  252 (645)
                        ++.+|+.++|||+||+.+++|+|+|++.+. +..|+|+..|||+.+|+|+|||||||+||..   .|.|+|++|+|++
T Consensus       159 --~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~e~h~IlsWsF~s  235 (251)
T 3ipv_A          159 --SLANGEAAKVLITYNSAVKLLVASLVYPSS-KTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFAS  235 (251)
T ss_dssp             --CCCTTCEEEEEEEEETTTTEEEEEEECTTT-CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEE
T ss_pred             --EecCCCEEEEEEEEeCCCCEEEEEEecCCC-CccceEEEEechHHhCCCcEEEEEEEecCCCccccceeEEEEEEEEE
Confidence              478999999999999999999999997664 5688999999999999999999999999998   9999999999998


Q ss_pred             cC
Q 041096          253 SG  254 (645)
Q Consensus       253 ~~  254 (645)
                      ..
T Consensus       236 ~l  237 (251)
T 3ipv_A          236 KL  237 (251)
T ss_dssp             EE
T ss_pred             EC
Confidence            63

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=100.00  E-value=3.4e-61  Score=478.51  Aligned_cols=228  Identities=32%  Similarity=0.539  Sum_probs=203.6

Q ss_pred             hcccCCceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEE
Q 041096           18 SFVLSNNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSF   91 (645)
Q Consensus        18 ~~~~~~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f   91 (645)
                      ....+..++|+|++|.  ..||+|+|||.+ .+|.|+||+.+.+   ..+++|||+|++||+|||+.+|+++||+|+|+|
T Consensus         5 ~~~sa~~~sF~f~~F~~~~~~l~l~GdA~i~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pv~l~d~~tg~vaSFsT~F~F   84 (261)
T 3zyr_A            5 RANSTDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTNRVANLQTQFSF   84 (261)
T ss_dssp             ---CCEEEEEEESSCCSCCTTEEEEETCEECTTSCEECSCBCTTSCBCSSEEEEEEESSCEECBCTTTCCBEEEEEEEEE
T ss_pred             ccCcCcccEEEcCCCCCCCCCeEEeccEEecCCCeEEeCCCCCCCccccCCEEEEEECCCEEeecCCCCCceeEEEEEEE
Confidence            4455678999999998  789999999999 6899999997421   137899999999999999999999999999999


Q ss_pred             EEeeCCCCCCCCceEEEEecCCCC--CCCCCCccccccCCCCC---CCcEEEEEeeCC---CCCCCCCCCCCeeeeecCC
Q 041096           92 SINNVNPSSFGDGLAFFISPDNQI--LGSAGGCLGLVNSSQLT---KNKFVAIEFDTR---LDPHFDDPDENHIGLDIDS  163 (645)
Q Consensus        92 ~i~~~~~~~~g~G~aF~l~p~~~~--~~~~g~~lGl~~~~~~~---~~~~vAVEFDt~---~n~~~~d~~~~Hvgi~vns  163 (645)
                      .|.+. ...+||||||||+|.+..  .+++||||||+|.++++   .+|+|||||||+   +|.+| ||++|||||||||
T Consensus        85 ~I~~~-~~~~gdGlAF~lap~~~~~p~~~~g~~LGL~n~~~~g~~~~n~~vAVEFDT~~~~~n~~~-Dp~~nHVGIdvNs  162 (261)
T 3zyr_A           85 FLSSP-LSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTW-DPNYQHIGIDVNS  162 (261)
T ss_dssp             EEECS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCCTTTTTCGGGCCCEEEEEECCCCTTTCTT-SCSSCEEEEEESS
T ss_pred             EEecC-CCCCCccEEEEEccCCCCCCCCCCCceeeeecccccCCCccCcEEEEEEeccccccCcCC-CCCCCeEEEEcCC
Confidence            99987 677899999999998763  47889999999987653   379999999999   99888 9999999999999


Q ss_pred             cccccccCCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCcccee
Q 041096          164 LESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELH  243 (645)
Q Consensus       164 ~~s~~~~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~  243 (645)
                      +.|.++.+|     .+.+|+.++|||+||+.+++|+|+|++.+.+  .|+|+..|||+.+|||+|||||||+||...|.|
T Consensus       163 i~S~~s~~~-----~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~e~h  235 (261)
T 3zyr_A          163 IRSSKVVRW-----ERREGKTLNVLVTYNPSTRTIDVVATYPDGQ--RYQLSHVVDLTTILPEWVRVGFSAASGEQFQTH  235 (261)
T ss_dssp             SSCSEEEEC-----CCCTTCCEEEEEEEETTTTEEEEEEECTTCC--EEEEEEECCGGGTSCSEEEEEEEEEESSSCCEE
T ss_pred             CCccccccc-----cccCCceEEEEEEEcCCCCEEEEEEEcCCCC--CeEEEEEechHHhCcCcEEEEEEecCCCccceE
Confidence            999998876     4678999999999999999999999976633  889999999999999999999999999999999


Q ss_pred             eeeeeeeeecC
Q 041096          244 MIQSWSFQTSG  254 (645)
Q Consensus       244 ~i~sw~f~~~~  254 (645)
                      +|++|+|++..
T Consensus       236 ~IlsWsF~s~l  246 (261)
T 3zyr_A          236 NLESWSFTSTL  246 (261)
T ss_dssp             EEEEEEEEEEE
T ss_pred             EEEEEEEEEEc
Confidence            99999999863

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=100.00  E-value=6.9e-60  Score=466.22  Aligned_cols=224  Identities=31%  Similarity=0.558  Sum_probs=200.9

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCC-CC-CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTREL-GV-PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~-~~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+. +|.|+||++. +. ..+++|||+|++||+|||+.+|+++||+|+|+|+|.+++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~~   81 (237)
T 1fny_A            2 GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEeccCCeEEecCCcCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            35789999998  6899999999994 7999999864 11 157899999999999999999999999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      ...+||||||||+|....+++.||||||+|.++ ++.+++|||||||++|.+| ||++|||||||||+.|.++.+|    
T Consensus        82 ~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~n~~~-Dp~~nHVGIdvNsi~S~~~~~~----  156 (237)
T 1fny_A           82 PATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPW----  156 (237)
T ss_dssp             TTSCCEEEEEEEEETTCCCCCCGGGTTTCC---CCTTSCCEEEEEECSCCTTT-CCSSSEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCCEEEEeccCCCCCCCCCCcccccccCCCCccccEEEEEeecccCccc-CCCCCceEEecCCccccccccc----
Confidence            778899999999998776778899999998653 4458999999999999985 9999999999999999998876    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~  253 (645)
                       ++.+|+.++|||+||+.+++|+|+|++.+ .|..|+|+..|||+.+||++|||||||+||..   .|.|+|++|+|++.
T Consensus       157 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~s~  234 (237)
T 1fny_A          157 -NWTNGEVANVFISYEASTKSLTASLVYPS-LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             -CCCTTCCEEEEEEEEGGGTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEeCCCcEEEEEEecCC-CCCcceEEEEechHHhCCCcEEEEEEEeeCCCCcccceeEEEEEEEEEe
Confidence             48899999999999999999999999765 36679999999999999999999999999998   99999999999875

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=100.00  E-value=2.9e-59  Score=462.89  Aligned_cols=224  Identities=35%  Similarity=0.565  Sum_probs=201.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      .+++|+|++|.  ..||+|+|||.+. +|.|+||++..+   ..+++|||+|++||+||++.+|+++||+|+|+|+|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~   81 (239)
T 1gzc_A            2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEcccEEEcCCCcEEeCCCCcCCcccCCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCC
Confidence            35789999998  6899999999995 799999997422   14789999999999999999999999999999999987


Q ss_pred             C-CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCc
Q 041096           97 N-PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL  174 (645)
Q Consensus        97 ~-~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~  174 (645)
                      + ...+||||||||+|....+++.||||||+|.++ ++.+++|||||||++|. |+||++|||||||||+.|.++.+|  
T Consensus        82 ~~~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~n~-~dDp~~nHVGIdvns~~S~~~~~~--  158 (239)
T 1gzc_A           82 YTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPF--  158 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCCCCCCGGGTTTCSSSSCCGGGCCEEEEEECSCCT-TSCSSSSEEEEEESSSSCSEEEEC--
T ss_pred             CCCCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCccccEEEEEEeccccc-CCCCCCCeEEEecCCccccccccc--
Confidence            6 677899999999998776778999999998653 33489999999999998 888999999999999999998875  


Q ss_pred             cccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC---ccceeeeeeeeee
Q 041096          175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG---STELHMIQSWSFQ  251 (645)
Q Consensus       175 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~sw~f~  251 (645)
                         ++.+|+.++|||+||+.+++|+|+|++.+ .|..|+|+..+||+.+||++|||||||+||.   ..|.|+|++|+|+
T Consensus       159 ---~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~  234 (239)
T 1gzc_A          159 ---QLDNGQVANVVIKYDAPSKILHVVLVYPS-SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ  234 (239)
T ss_dssp             ---CCCTTCEEEEEEEEETTTTEEEEEEECTT-TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             ---cccCCCEEEEEEEEeCCCcEEEEEEecCC-CCccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEeE
Confidence               48899999999999999999999999765 3567999999999999999999999999997   4899999999998


Q ss_pred             ec
Q 041096          252 TS  253 (645)
Q Consensus       252 ~~  253 (645)
                      +.
T Consensus       235 s~  236 (239)
T 1gzc_A          235 AS  236 (239)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=100.00  E-value=6.3e-59  Score=460.82  Aligned_cols=225  Identities=29%  Similarity=0.492  Sum_probs=202.5

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCCCCCceEE-EEeCCCcccccCCCCceeeEEEEEEEEEeeC-C
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGVPASSSGS-LIYNNPVPFFDQETNTTASFTSRFSFSINNV-N   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr-~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+. +|.|+||++.....+++|| |+|++||+||++.+|+++||+|+|+|+|.++ +
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gr~a~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~   81 (242)
T 1fx5_A            2 DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSAN   81 (242)
T ss_dssp             CEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESSC
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEeccCCcEEecCCCCcccCCccCEEEeCCCEEeecCCCCCccceEEEEEEEEecCCC
Confidence            46799999998  6899999999995 7999999974222578999 9999999999999999999999999999987 5


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCC-CCCCCCeeeeecCCcccccccCCCcc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHF-DDPDENHIGLDIDSLESIKTADPILQ  175 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~-~d~~~~Hvgi~vns~~s~~~~~~~~~  175 (645)
                      ...+||||||||+|....+++.||||||+|.++ ++.+++|||||||++|.++ +||++|||||||||+.|.++.++   
T Consensus        82 ~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~n~~vAVEFDT~~N~~~~~Dp~~nHVGIdvNs~~S~~~~~~---  158 (242)
T 1fx5_A           82 PKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERW---  158 (242)
T ss_dssp             GGGCCCEEEEEEECTTCCCCBCGGGTTTBSSSCCCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEEC---
T ss_pred             CCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCccCcEEEEEeccccCcccccCCCCCeEEEecCCccccceecc---
Confidence            667899999999998776778899999998654 3348999999999999986 69999999999999999998875   


Q ss_pred             ccccCCC--CeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEecc--CCccceeeeeeeeee
Q 041096          176 GIDLKSG--NVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST--EGSTELHMIQSWSFQ  251 (645)
Q Consensus       176 ~~~~~~g--~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsast--g~~~~~~~i~sw~f~  251 (645)
                        ++.+|  +.++|||+||+.+++|+|+|++... |..|+|+..+||+.+||++|||||||+|  |.. |.|+|++|+|+
T Consensus       159 --~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~  234 (242)
T 1fx5_A          159 --NKRYGLNNVANVEIIYEASSKTLTASLTYPSD-QTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQ-ATHEVLNWYFT  234 (242)
T ss_dssp             --CCCCSGGGCEEEEEEEETTTTEEEEEEEETTT-TEEEEEEEECCGGGTSCSEEEEEEEEEEETTSC-EEEEEEEEEEE
T ss_pred             --cccCCCceeEEEEEEEeCCCCEEEEEEecCCC-CccceeeEEechHHhCCccEEEEEEecccCCCc-ceeEEEEEEeE
Confidence              47899  9999999999999999999998653 5679999999999999999999999999  999 99999999999


Q ss_pred             ecC
Q 041096          252 TSG  254 (645)
Q Consensus       252 ~~~  254 (645)
                      +..
T Consensus       235 s~l  237 (242)
T 1fx5_A          235 STF  237 (242)
T ss_dssp             EES
T ss_pred             eec
Confidence            863

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=100.00  E-value=3e-59  Score=462.77  Aligned_cols=224  Identities=34%  Similarity=0.560  Sum_probs=201.2

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCC-CC-CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTREL-GV-PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~-~~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+. +|.|+||++. +. ..+++|||+|++||+|||+.+|+++||+|+|+|+|.+++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~   81 (239)
T 1dbn_A            2 DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAPN   81 (239)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEecCCCcEEeCCCCCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            46799999998  6899999999994 7999999864 11 157899999999999999999999999999999999887


Q ss_pred             CCCCCCceEEEEecCCCC--CCCCCCccccccCCC-CCCCcEEEEEeeCCCC---CCCCCCCCCeeeeecCCcccccccC
Q 041096           98 PSSFGDGLAFFISPDNQI--LGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLD---PHFDDPDENHIGLDIDSLESIKTAD  171 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~--~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n---~~~~d~~~~Hvgi~vns~~s~~~~~  171 (645)
                      ...+||||||||+|....  .++.||||||+|.++ ++.+++|||||||++|   .+| ||++|||||||||+.|.++.+
T Consensus        82 ~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~n~~~~~~-Dp~~nHVGIdvNs~~S~~~~~  160 (239)
T 1dbn_A           82 PDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSSNQIVAVEFDTYFAHSYDPW-DPNYRHIGIDVNGIESIKTVQ  160 (239)
T ss_dssp             TTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSCCCTTSCCEEEEEECCCCTTTCTT-SCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCCCCccccEEEEEEeccccCccccc-CCCCCcEEEecCCccccceEc
Confidence            778899999999998763  468899999998653 3458999999999999   774 999999999999999999887


Q ss_pred             CCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc--cceeeeeeee
Q 041096          172 PILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS--TELHMIQSWS  249 (645)
Q Consensus       172 ~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~sw~  249 (645)
                      +     ++.+|+.++|||+||+.+++|+|+|++.. .+..|+|+..|||+.+|+++|||||||+||..  .|.|+|++|+
T Consensus       161 ~-----~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWs  234 (239)
T 1dbn_A          161 W-----DWINGGVAFATITYLAPNKTLIASLVYPS-NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS  234 (239)
T ss_dssp             C-----CCCTTCCEEEEEEEEGGGTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEE
T ss_pred             c-----cccCCCEEEEEEEEeCCCcEEEEEEccCC-CCCcceEEEEechHHhCCccEEEEEEeccCCCccceeeEEEEEE
Confidence            6     48899999999999999999999999865 35679999999999999999999999999999  9999999999


Q ss_pred             eeec
Q 041096          250 FQTS  253 (645)
Q Consensus       250 f~~~  253 (645)
                      |+++
T Consensus       235 F~s~  238 (239)
T 1dbn_A          235 FTST  238 (239)
T ss_dssp             EEEE
T ss_pred             eEec
Confidence            9874

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=100.00  E-value=1.6e-58  Score=460.28  Aligned_cols=223  Identities=32%  Similarity=0.528  Sum_probs=202.9

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      .+++|+|++|.  ..||+|+|||.+ .+|.|+||++..+   ..+++|||+|++||+|||+.+|+++||+|+|+|+|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~GdA~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~   81 (253)
T 1sbf_A            2 ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAP   81 (253)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEcCCCeEEeCCCccCCcccCCCeEEEEECCCEecccCCCCcccceEEEEEEEEeCC
Confidence            45799999998  689999999999 5899999997422   14789999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      +...+||||||||+|....+++.||||||+|.+ ++.+++|||||||++|.  +||++|||||||||+.|.++.++    
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~~~g~~LGL~n~~-~~~n~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~t~~~----  154 (253)
T 1sbf_A           82 DTKRLADGLAFFLAPIDTKPQTHAGYLGLFNEN-ESGDQVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTSW----  154 (253)
T ss_dssp             STTSCCEEEEEEEEETTCCCCCCGGGTTTCCTT-SCCCSCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCCcEEEEEecCCCCCCCCCCccccccCC-CcccceEEEEeccccCC--CCCCCCcEEEEcCCccccceecc----
Confidence            777889999999999877677889999999876 67799999999999998  49999999999999999998875    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc--cceeeeeeeeeeecC
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS--TELHMIQSWSFQTSG  254 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~sw~f~~~~  254 (645)
                       ++.+|+.++|||+||+.+++|+|+|++... |..|+|+..+||+.+||++|||||||+||..  .|.|+|++|+|++..
T Consensus       155 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~H~IlsWsF~s~l  232 (253)
T 1sbf_A          155 -DLANNKVAKVLITYDASTSLLVASLVYPSQ-RTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNL  232 (253)
T ss_dssp             -CCCTTCCEEEEEEEETTTTEEEEEEEETTT-TEEEEEEEECCHHHHSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             -cccCCCeeEEEEEEeCCCcEEEEEEecCCC-CCcceEEEEechHHhCCCceEEEEEeccCCCccceeeEEEEEEeEeec
Confidence             478999999999999999999999998653 5679999999999999999999999999999  999999999999863

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=100.00  E-value=1e-58  Score=456.34  Aligned_cols=219  Identities=32%  Similarity=0.596  Sum_probs=200.1

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      .+++|+|++|+  ..||+|+|||.+ .+|.|+||++.  ..+++|||+|++||+|||+.+|+++||+|+|+|+|.+++..
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~--~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~~~   79 (232)
T 1v6i_A            2 ETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLN--KVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDY   79 (232)
T ss_dssp             EEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTT--STTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEccCCcEEeCCCC--CCCceEEEEeCCCEEeecCCCCCccceEEEEEEEEecCCCC
Confidence            35799999998  689999999999 57999999861  35789999999999999999999999999999999988777


Q ss_pred             CCCCceEEEEecCCC--CCCC-CCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096          100 SFGDGLAFFISPDNQ--ILGS-AGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~--~~~~-~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      .+||||||||+|...  +.++ .||||||+|.  ++.+++|||||||++|.+++||++|||||||||+.|.++.++    
T Consensus        80 ~~gdGlAF~l~p~~~~~p~~~~~g~~LGl~n~--~~~~~~vAVEFDT~~n~~~~Dp~~nHVGIdvns~~S~~~~~~----  153 (232)
T 1v6i_A           80 DPADGIIFFIAPEDTQIPAGSIGGGTLGVSDT--KGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW----  153 (232)
T ss_dssp             BCCCEEEEEEEETTCCCCTTCCCGGGTTTSCT--TSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEEC----
T ss_pred             CCCCCEEEEEecCCCCCCCCcCCCcccccccC--CCcccEEEEEeecccccccCCCCCCeEEEEcCCccccccccc----
Confidence            889999999999875  3456 8999999986  566899999999999998789999999999999999998876    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC--ccceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG--STELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~--~~~~~~i~sw~f~~~  253 (645)
                       ++.+|+.++|||+||+.+++|+|+|++ + .|..|+|+..|||+.+||++|||||| +||.  ..|.|+|++|+|++.
T Consensus       154 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~-~~~~~~ls~~vdL~~~l~e~v~VGFS-sTG~~~~~~~h~IlsWsF~s~  228 (232)
T 1v6i_A          154 -NSVSGAVVKVTVIYDSSTKTLSVAVTN-D-NGDITTIAQVVDLKAKLPERVKFGFS-ASGSLGGRQIHLIRSWSFTST  228 (232)
T ss_dssp             -CCCTTCEEEEEEEEETTTTEEEEEEEC-T-TSCEEEEEEECCHHHHSCSEEEEEEE-EECCSSBCCEEEEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEeCCCcEEEEEEec-C-CCCcceEEEEechHHhCCccEEEEEE-ecCCCccccEEEEEEEEEEee
Confidence             488999999999999999999999998 4 57789999999999999999999999 9998  699999999999886

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=100.00  E-value=1.5e-58  Score=461.13  Aligned_cols=225  Identities=32%  Similarity=0.492  Sum_probs=203.9

Q ss_pred             CceeEEeCCCCCCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           23 NNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        23 ~~~~f~~~~f~~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      .+++|+|++|...||+|+|||.+.+|.|+||++..+   ..+++|||+|++||+|||+.+|+++||+|+|+|+|.+++..
T Consensus         2 ~~~~F~f~~F~~~~l~l~GdA~v~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~   81 (253)
T 1g7y_A            2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKS   81 (253)
T ss_dssp             EEEEEEESSCCSSCEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSSGG
T ss_pred             cceEEEcCCCCcCCEEEecceEEeCCEEEeCCCCCCCccccCCeEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCC
Confidence            457999999999999999999999999999997422   15789999999999999999999999999999999987667


Q ss_pred             CCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccc
Q 041096          100 SFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGID  178 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~  178 (645)
                      .+||||||||+|....+++.|+||||+|.++ ++.+++|||||||++|.+| ||++|||||||||+.|.++.++     +
T Consensus        82 ~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~n~~vAVEFDT~~N~~~-Dp~~nHVGIdvns~~S~~t~~~-----~  155 (253)
T 1g7y_A           82 SSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASW-----G  155 (253)
T ss_dssp             GCCCEEEEEEEETTCCCCCCGGGTTTCSCSSCCGGGCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEEEC-----C
T ss_pred             CCCCcEEEEEecCCCCCCCCCCcccccccCCCCccCceEEEEecceeccCc-CCCCCcEeeccCCccccceecc-----c
Confidence            7899999999998776778899999998753 3348999999999999984 9999999999999999998875     4


Q ss_pred             cCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeecC
Q 041096          179 LKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTSG  254 (645)
Q Consensus       179 ~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~~  254 (645)
                      +.+|+.++|||+||+.+++|+|+|++.. .|..|+|+..+||+.+||++|||||||+||..   .|.|+|++|+|++..
T Consensus       156 l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~l  233 (253)
T 1g7y_A          156 LANGQNAEILITYNAATSLLVASLVHPS-RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKL  233 (253)
T ss_dssp             CCTTSEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEEEEE
T ss_pred             cCCCCeEEEEEEEeCCCCEEEEEEecCC-CCCcceEEEEechHHhCCCceEEEEEeCcCCCCcccceeEEEEEEEEeeC
Confidence            7899999999999999999999999865 35679999999999999999999999999999   999999999999863

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=100.00  E-value=2.6e-58  Score=460.39  Aligned_cols=228  Identities=33%  Similarity=0.528  Sum_probs=203.4

Q ss_pred             CceeEEeCCCC---CCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN---LRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~---~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      ..++|+|++|.   ..||+|+|||.+.+|.|+||++..+   ..++.|||+|++||+|||+.+|+++||+|+|+|+|.++
T Consensus         3 ~~~~F~f~~F~~~~~~~l~l~GdA~v~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vasFsT~F~F~I~~~   82 (257)
T 1hql_A            3 DSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT   82 (257)
T ss_dssp             -CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC
T ss_pred             cceEEEcCCCCCCCCCCEEEccceEecCCcEEecCCccCCcccCCCeEEEEECCCEecccCCCCCeeceEEEEEEEEecC
Confidence            46799999998   6799999999999999999997422   15789999999999999999999999999999999987


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCC---CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCC
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ---LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPI  173 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~---~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~  173 (645)
                       ...+||||||||+|....+++.|+||||+|.++   ++.+++|||||||++|.+|+||++|||||||||+.|.++.++.
T Consensus        83 -~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHVGIdvNs~~S~~s~~~~  161 (257)
T 1hql_A           83 -GNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWE  161 (257)
T ss_dssp             -SSCCCCEEEEEEECTTCCCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEECC
T ss_pred             -CCCCCCcEEEEEecCCCCCCCCCccccccccccccCCccCceEEEEecccccccccCCCCCceeeeeCCccccceeccC
Confidence             677899999999998776778899999998764   2348999999999999999999999999999999999988873


Q ss_pred             ccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccC-Cccceeeeeeeeeee
Q 041096          174 LQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE-GSTELHMIQSWSFQT  252 (645)
Q Consensus       174 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg-~~~~~~~i~sw~f~~  252 (645)
                      .  .+|.+|+.++|||+||+.+++|+|+|++...  ..|+|+..+||+.+||++|||||||+|| ...|.|+|++|+|++
T Consensus       162 ~--~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~~~H~IlsWsF~s  237 (257)
T 1hql_A          162 D--SDIFSGKIATARISYDGSAEILTVVLSYPDG--SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSS  237 (257)
T ss_dssp             H--HHHTSCSCEEEEEEEETTTTEEEEEEEETTT--EEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEE
T ss_pred             c--ccccCCceEEEEEEEeCCCCEEEEEEecCCC--CceeeEEeechHHhcCCceEEEEEeccCCCccceeEEEEEEeEe
Confidence            2  1255699999999999999999999998654  5689999999999999999999999999 899999999999998


Q ss_pred             cCC
Q 041096          253 SGF  255 (645)
Q Consensus       253 ~~~  255 (645)
                      ...
T Consensus       238 ~~~  240 (257)
T 1hql_A          238 NLQ  240 (257)
T ss_dssp             EC-
T ss_pred             cCC
Confidence            753

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=100.00  E-value=1.4e-58  Score=460.99  Aligned_cols=224  Identities=34%  Similarity=0.532  Sum_probs=204.1

Q ss_pred             CceeEEeCCCCCCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCC
Q 041096           23 NNMNFDFTSFNLRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP   98 (645)
Q Consensus        23 ~~~~f~~~~f~~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   98 (645)
                      .+++|+|++|...||+|+|||.+ .+|.|+||++..+   ..++.|||+|++||+|||+.+|+++||+|+|+|+|.+++.
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~   81 (252)
T 1fat_A            2 NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPNN   81 (252)
T ss_dssp             CCEEEEESSCCGGGEEEEETCEECTTSCEECSCCC-CCCCCTTCEEEEEEEEEEECEETTTTEEEEEEEEEEEECCCCSS
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEeCCCCCCCccccCCEEEEEECCCEecccCCCCcccceEEEEEEEEeCCCC
Confidence            46899999999899999999999 5799999997421   1578999999999999999999999999999999998876


Q ss_pred             CCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccc
Q 041096           99 SSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGID  178 (645)
Q Consensus        99 ~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~  178 (645)
                      ..+||||||||+|....+++.|+||||+|.+ ++.+++|||||||++|.+| ||++|||||||||+.|.++.++     +
T Consensus        82 ~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~-~~~~~~vAVEFDT~~N~~~-Dp~~nHVGIdvNs~~S~~~~~~-----~  154 (252)
T 1fat_A           82 AGPADGLAFALVPVGSQPKDKGGFLGLFDGS-NSNFHTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRW-----D  154 (252)
T ss_dssp             CBCCEEEEEEEEETTCCCCCSGGGTTTCCSS-CCCCCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEEEC-----C
T ss_pred             CCCCCcEEEEEccCCCCCCCCCccccccccC-CccCcEEEEEeecccCCCC-CCCCCeEEEecCCccccceecc-----c
Confidence            7789999999999877677889999999876 6779999999999999984 9999999999999999998875     4


Q ss_pred             cCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeecC
Q 041096          179 LKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTSG  254 (645)
Q Consensus       179 ~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~~  254 (645)
                      +.+|+.++|||+||+.+++|+|+|++... |..|+|+..+||+.+||++|||||||+||..   .|.|+|++|+|++..
T Consensus       155 l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~l  232 (252)
T 1fat_A          155 FVNGENAEVLITYDSSTNLLVASLVYPSQ-KTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASKL  232 (252)
T ss_dssp             CCTTCEEEEEEEEETTTTEEEEEEEETTT-TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEEEEE
T ss_pred             ccCCCEEEEEEEEeCCCCEEEEEEecCCC-CCcceEEEEechHHhCCCceEEEEEeccCCCCcccceEEEEEEEEEeeC
Confidence            78899999999999999999999998653 5679999999999999999999999999999   999999999999863

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=100.00  E-value=7.4e-58  Score=450.33  Aligned_cols=218  Identities=34%  Similarity=0.589  Sum_probs=198.6

Q ss_pred             eeEEeCCCC-CCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCC
Q 041096           25 MNFDFTSFN-LRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFG  102 (645)
Q Consensus        25 ~~f~~~~f~-~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g  102 (645)
                      ++|+|++|. ..||+|+|||.+. +|.|+||++. ...+++|||+|++||+||++.+|+++||+|+|+|+|.+++...+|
T Consensus         1 ~sF~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~-~~~~~~Gra~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~~~~g   79 (234)
T 2eig_A            1 VSFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDP-LVNRTTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPPT   79 (234)
T ss_dssp             CEEEESSCCSSSSEEEEETCEEEGGGEEESSSCG-GGSSEEEEEEESSCEECBCTTTCCBCEEEEEEEEEEEECTTSCCC
T ss_pred             CeEEcCCCCCCCCeEEcccEEEcCCCCeeeCCCC-CccCceEEEEeCCCEEeecCCCCCccceEEEEEEEEeCCCCCCCC
Confidence            479999998 8899999999995 7999999861 124689999999999999999999999999999999988777899


Q ss_pred             CceEEEEecCCC--CCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCC---CeeeeecCCcccccccCCCcccc
Q 041096          103 DGLAFFISPDNQ--ILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDE---NHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus       103 ~G~aF~l~p~~~--~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~---~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      |||||||+|...  +.++.|+||||+|.+ ++.+++|||||||++|. | ||++   |||||||||+.|.++.++     
T Consensus        80 dGlAF~l~p~~~~~p~~~~g~~LGl~n~~-~~~~~~vAVEFDT~~N~-~-Dp~~~~~nHVGIdvNsi~S~~~~~~-----  151 (234)
T 2eig_A           80 DGVVFFLAPWGTEIPPNSQGGYLGITDSS-NSQNQFVAVEFDSHPNV-W-DPKSLRSSHIGIDVNSIMSLKAVNW-----  151 (234)
T ss_dssp             CEEEEEEEETTCCCCTTCCGGGTTTCCTT-CSCCCCEEEEEECSCCT-T-SCTTTCSSEEEEEESSSSCSEEEEC-----
T ss_pred             CcEEEEEecCCCCCCcCCCCCccccccCC-CccccEEEEEeccccCc-c-CCCCCCCCceEEecCCccccceecc-----
Confidence            999999999875  446889999999876 67799999999999998 4 9999   999999999999988875     


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEecc--CCccceeeeeeeeeeecC
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST--EGSTELHMIQSWSFQTSG  254 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsast--g~~~~~~~i~sw~f~~~~  254 (645)
                      ++.+|+.++|||+||+.+++|+|+|++ + .|..|+|+..+||+.+||++|||||||+|  |.. |.|+|++|+|++..
T Consensus       152 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~-~~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s~l  227 (234)
T 2eig_A          152 NRVSGSLEKATIIYDSDTKILTVVMTH-Q-NGQITTISQEIDLKTVLPEKVSVGFSATTWNPER-ERHDIYSWSFTSTL  227 (234)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEE-T-TSCEEEEEEECCHHHHSCSEEEEEEEEEECSSCC-EEEEEEEEEEEEEC
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEec-C-CCCcceEeEeechHHhcCCceEEEEEeeecCCCc-ceeEEEEEEEEecC
Confidence            478999999999999999999999999 4 57789999999999999999999999999  998 99999999999863

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=100.00  E-value=7.1e-58  Score=454.09  Aligned_cols=222  Identities=34%  Similarity=0.561  Sum_probs=200.4

Q ss_pred             CceeEEeCCC----C--CCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEE
Q 041096           23 NNMNFDFTSF----N--LRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSI   93 (645)
Q Consensus        23 ~~~~f~~~~f----~--~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i   93 (645)
                      .+++|+|++|    .  ..||+|+|||.+.+|.|+||++...   ..++.|||+|++||+||+ .+|+++||+|+|+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~~~~~l~l~GdA~i~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~-~tg~vasFsT~F~F~I   80 (243)
T 1gsl_A            2 NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWD-STGKAASFYTSFTFLL   80 (243)
T ss_dssp             CCCEEEESCCCCTTCCTTSSEEEEETCEEETTEEECSCBCTTSCBCSSEEEEEEESSCEECBC-TTSCBCEEEEEEEEEE
T ss_pred             cceEEEcCCCccccCCCCCCEEEccceEecCCcEEecCCccCCcccCCCeEEEEECCCEEccC-CCCCcCceEEEEEEEE
Confidence            4579999999    6  5799999999999999999997421   157899999999999999 9999999999999999


Q ss_pred             eeCCCCCCCCceEEEEecCCCCCCCCCCccccccCCCC---CCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCccccccc
Q 041096           94 NNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL---TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA  170 (645)
Q Consensus        94 ~~~~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~---~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~  170 (645)
                      .++ ...+||||||||+|....+++.|+||||+|.+++   +.+++|||||||++|.+|+||++||||||+||+.|.++.
T Consensus        81 ~~~-~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHvGIdvns~~S~~~~  159 (243)
T 1gsl_A           81 KNY-GAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATT  159 (243)
T ss_dssp             EES-SSSCBCEEEEEEEETTCCCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEE
T ss_pred             ecC-CCCCCCCEEEEEecCCCCCCCCCCcccccccccccCCccCcEEEEEeccccccccCCCCCCceeeccCCcccccee
Confidence            987 6778999999999987767788999999987642   348999999999999999999999999999999999888


Q ss_pred             CCCccccccCC---CCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeee
Q 041096          171 DPILQGIDLKS---GNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQS  247 (645)
Q Consensus       171 ~~~~~~~~~~~---g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~s  247 (645)
                      ++     ++.+   |+.++|||+||+.+++|+|+|++...  ..|+|+..+||+.+||++|||||||+|| ..|.|+|++
T Consensus       160 ~~-----~l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~ls~~vdL~~~l~~~~~vGFSAsTG-~~~~h~Ils  231 (243)
T 1gsl_A          160 RW-----ENDDAYGSSIATAHITYDARSKILTVLLSYEHG--RDYILSHVVDLAKVLPQKVRIGFSAGVG-YDEVTYILS  231 (243)
T ss_dssp             EC-----CHHHHTSCCEEEEEEEEETTTTEEEEEEEETTS--CEEEEEEECCHHHHSCSEEEEEEEEEEC-BSEEEEEEE
T ss_pred             ee-----EEeccCCCcEEEEEEEEeCCCCEEEEEEecCCC--CceeEEEEechHHhCCCceEEEEEeccC-CcceeEEEE
Confidence            76     3666   99999999999999999999998654  5789999999999999999999999999 999999999


Q ss_pred             eeeeecC
Q 041096          248 WSFQTSG  254 (645)
Q Consensus       248 w~f~~~~  254 (645)
                      |+|++..
T Consensus       232 WsF~s~l  238 (243)
T 1gsl_A          232 WHFFSTL  238 (243)
T ss_dssp             EEEEEEC
T ss_pred             EEEEeec
Confidence            9999863

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=100.00  E-value=1.1e-57  Score=451.92  Aligned_cols=224  Identities=35%  Similarity=0.604  Sum_probs=200.6

Q ss_pred             CCceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCC
Q 041096           22 SNNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP   98 (645)
Q Consensus        22 ~~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   98 (645)
                      +..++|+|++|.  ..||+|+|||.+. +|.|+||++.....+++|||+|++||+||++.+|+++||+|+|+|+|.++ .
T Consensus         3 ~~~~~F~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~tg~vasFsT~F~F~I~~~-~   81 (242)
T 1qnw_A            3 SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKAD-K   81 (242)
T ss_dssp             CCSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBS-S
T ss_pred             ccceEEEcCCCCCCCCCeEEccceEEccCCcEEecCCCCcccCCeEEEEeCCCEeeecCCCCCcccEEEEEEEEEecC-C
Confidence            457899999998  6899999999995 79999999742125789999999999999999999999999999999987 6


Q ss_pred             CCCCCceEEEEecCCC--CCCCCCCccccccCCC-CCCCcEEEEEeeCC----CCCCCCCCCCCeeeeecCCcccccccC
Q 041096           99 SSFGDGLAFFISPDNQ--ILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTR----LDPHFDDPDENHIGLDIDSLESIKTAD  171 (645)
Q Consensus        99 ~~~g~G~aF~l~p~~~--~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~----~n~~~~d~~~~Hvgi~vns~~s~~~~~  171 (645)
                      ..+||||||||+|...  +.++.||||||+|.++ ++.+++|||||||+    +|.  +||++|||||||||+.|.++.+
T Consensus        82 ~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~~~~~N~--~Dp~~nHVGIdvNs~~S~~~~~  159 (242)
T 1qnw_A           82 SDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYNP--WDPDFKHIGIDVNSIKSIKTVK  159 (242)
T ss_dssp             SCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSSCCTTSCCEEEEEECCCCTTTCT--TSCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCEEEEEecCCCCCCcCCCCCcccccccCCCCccccEEEEEeecccccccCC--CCCCCCcEEEecCCccccceec
Confidence            7789999999999875  4468899999998654 34589999999999    997  4999999999999999999887


Q ss_pred             CCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc--cceeeeeeee
Q 041096          172 PILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS--TELHMIQSWS  249 (645)
Q Consensus       172 ~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~sw~  249 (645)
                      |     ++.+|+.++|||+||+.+++|+|+|++.. .|..|+|+..+||+.+||++|||||||+||..  .|.|+|++|+
T Consensus       160 ~-----~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWs  233 (242)
T 1qnw_A          160 W-----DWRNGEVADVVITYRAPTKSLTVCLSYPS-DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWY  233 (242)
T ss_dssp             C-----CCCTTCCEEEEEEEEGGGTEEEEEEECTT-TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEE
T ss_pred             c-----cccCCCEEEEEEEEeCCCcEEEEEEecCC-CCcceeEEEeechHHhcCCceEEEEEeccCCCccceEEEEEEEE
Confidence            5     47899999999999999999999999765 36679999999999999999999999999999  9999999999


Q ss_pred             eeecC
Q 041096          250 FQTSG  254 (645)
Q Consensus       250 f~~~~  254 (645)
                      |++..
T Consensus       234 F~s~l  238 (242)
T 1qnw_A          234 FTSNL  238 (242)
T ss_dssp             EEEEC
T ss_pred             eEeec
Confidence            99863

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=100.00  E-value=1.7e-57  Score=450.54  Aligned_cols=221  Identities=33%  Similarity=0.525  Sum_probs=200.7

Q ss_pred             ceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC-
Q 041096           24 NMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV-   96 (645)
Q Consensus        24 ~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-   96 (645)
                      +++|+|++|.  ..||+|+|||.+. +|.|+||++..+   ..++.|||+|++||+|||+.+|+++||+|+|+|+|.++ 
T Consensus         2 ~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~~g~vasFsT~F~F~I~~~~   81 (238)
T 1f9k_A            2 TQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPY   81 (238)
T ss_dssp             EEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCC
T ss_pred             CeEEEcCCCCCCCCCeEEccceEECcCCcEEecCccccCccccCCEEEEEECCCEEeecCCCCCeeeEEEEEEEEEecCC
Confidence            5789999998  6899999999994 799999997421   14789999999999999999999999999999999987 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      +...+||||||||+|....+++.|+||||+|.+ ++ +++|||||||++|.  +||++||||||||++.|.++.++    
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~-~~-~~~vAVEFDT~~N~--~Dp~~nHVgIdvns~~S~~s~~~----  153 (238)
T 1f9k_A           82 AYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPP-EG-DNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTLHF----  153 (238)
T ss_dssp             SSSCCCEEEEEEEECTTCCCCCSGGGTTTCCSS-CC-SCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCCcEEEEEccCCCCCCCCCCcccccccC-CC-CcEEEEEEecccCC--CCCCCCeEEEecCCccccceEee----
Confidence            667789999999999877677889999999876 66 99999999999998  49999999999999999988775    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCC--ccEEeEEeccCCc---cceeeeeeeeee
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKG--NMYVGFSASTEGS---TELHMIQSWSFQ  251 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~--~~~vGfsastg~~---~~~~~i~sw~f~  251 (645)
                       ++.+|+.++|||+||+.+++|+|+|++.. .|..|+|+..|||+.+||+  +||||||||||..   .|.|+|++|+|+
T Consensus       154 -~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~~~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~  231 (238)
T 1f9k_A          154 -QLENGGVANVVIKYDSPTKILNVVLAFHS-VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFT  231 (238)
T ss_dssp             -CCCTTCCEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEeCCCCEEEEEEecCC-CCCceeEEEEechHHhCCCCceEEEEEEeCcCCCCcccceEEEEEeEeE
Confidence             58899999999999999999999999865 3567899999999999999  9999999999999   999999999999


Q ss_pred             ecC
Q 041096          252 TSG  254 (645)
Q Consensus       252 ~~~  254 (645)
                      +..
T Consensus       232 s~~  234 (238)
T 1f9k_A          232 SSL  234 (238)
T ss_dssp             EEC
T ss_pred             eec
Confidence            863

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=100.00  E-value=1.1e-57  Score=452.01  Aligned_cols=222  Identities=37%  Similarity=0.594  Sum_probs=200.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCC-CC-CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC-
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTREL-GV-PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV-   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~-~~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-   96 (645)
                      .+++|+|++|.  ..||+|+|||.+ .+|.|+||+.. +. ..+++|||+|++||+|||+.+|+++||+|+|+|+|.++ 
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~   81 (242)
T 1wbf_A            2 KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPF   81 (242)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSC
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEecCcccCCcccCCeEEEEECCCEecccCCCCCeeeEEEEEEEEEeCCC
Confidence            45799999998  689999999999 57999999863 11 15789999999999999999999999999999999987 


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      +...+||||||||+|....+++.|+||||+|.+  +.+++|||||||++|.  +||++|||||||||+.|.++.++    
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~~~~g~~LGl~n~~--~~~~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~~~~~----  153 (242)
T 1wbf_A           82 PRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL--SPYPFVAVEFDTFRNT--WDPQIPHIGIDVNSVISTKTVPF----  153 (242)
T ss_dssp             CSSCCCEEEEEEEECSSCCCCCCGGGTTTCCTT--SCCCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCCcEEEEEecCCCCCCCCCCccccccCC--CcCcEEEEEeccccCC--CCCCCCeEEEECCCccccceeee----
Confidence            567789999999999877677889999999865  6799999999999998  49999999999999999988775    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEecc----CCc---cceeeeeeee
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST----EGS---TELHMIQSWS  249 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsast----g~~---~~~~~i~sw~  249 (645)
                       ++.+|+.++|||+||+.+++|+|+|++... |..|+|+..|||+.+||++|||||||+|    |..   .|.|+|++|+
T Consensus       154 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~v~VGFSAsTg~~~G~~~~~~~~h~IlsWs  231 (242)
T 1wbf_A          154 -TLDNGGIANVVIKYDASTKILHVVLVFPSL-GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS  231 (242)
T ss_dssp             -CCCTTSCEEEEEEEETTTTEEEEEEEETTT-TEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEEE
T ss_pred             -EecCCCEEEEEEEEeCCCCEEEEEEccCCC-CCcceEEEEechHHhcCCceEEEEEEeecCcCCccccccceEEEEEEE
Confidence             588999999999999999999999998653 5678999999999999999999999999    888   8999999999


Q ss_pred             eeecC
Q 041096          250 FQTSG  254 (645)
Q Consensus       250 f~~~~  254 (645)
                      |++..
T Consensus       232 F~s~l  236 (242)
T 1wbf_A          232 FSASL  236 (242)
T ss_dssp             EEEEC
T ss_pred             eEecC
Confidence            99863

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=100.00  E-value=3.4e-57  Score=448.13  Aligned_cols=222  Identities=31%  Similarity=0.559  Sum_probs=201.0

Q ss_pred             CceeEEeCCCC--CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSS  100 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  100 (645)
                      .+++|+|++|+  ..||+|+|||...+|.|+||++   ..++.|||+|++||+|||+.+|+++||+|+|+|+|.+++...
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~~~~g~l~LT~~---~~~~~G~a~y~~Pv~l~~~~~~~~~sFst~F~F~I~~~~~~~   78 (234)
T 2bqp_A            2 ETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKA---VKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYN   78 (234)
T ss_dssp             EEEEEEESSBCTTCTTEEEEETCEEETBEEEEECS---CTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTS
T ss_pred             cceEEEcCCCCCCCCCEEEeeceecCCCEEEeCCC---CCCCEEEEEECCCEEcccCCCCceeeEEEEEEEEEeCCCCCC
Confidence            45799999998  6899999999977899999997   457999999999999999999999999999999999887778


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCC--CCeeeeecCCcccccccCCCcccc
Q 041096          101 FGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPD--ENHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus       101 ~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~--~~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      +||||||+|+|....+++.|++|||+|.++ ++.+++|||||||++|.+| ||+  +||||||||++.|.++.++     
T Consensus        79 ~gdGlAF~l~p~~~~p~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~N~~~-Dp~~~~nHVgIdvns~~S~~s~~~-----  152 (234)
T 2bqp_A           79 VADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAW-DPSNRDRHIGIDVNSIKSVNTKSW-----  152 (234)
T ss_dssp             CCCEEEEEEEETTCCCCCCGGGTTTCSCSSCCGGGCCEEEEEECSCCTTT-SCTTCCCEEEEEESSSSCSEEEEC-----
T ss_pred             CCCcEEEEEecCCCCCCCCCCccccccccCCCCCCcEEEEEEecccCccc-CCCCCCCceeEeeCCccccceEee-----
Confidence            999999999998775668899999998753 3348999999999999885 999  9999999999999988775     


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeCCC----CCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeec
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYSNL----KPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS  253 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~----~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~  253 (645)
                      ++.+|+.++|||+||+.+++|+|+|++...    +|..|+|+..+||+.+||++|||||||+||...|.|+|++|+|+++
T Consensus       153 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s~  232 (234)
T 2bqp_A          153 KLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSE  232 (234)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEE
T ss_pred             EEcCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEEEEEeccCCCcccEEEEEEEEEee
Confidence            477899999999999999999999997643    4678999999999999999999999999999999999999999875

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=100.00  E-value=3.9e-57  Score=446.46  Aligned_cols=221  Identities=33%  Similarity=0.529  Sum_probs=197.5

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCC-C-CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELG-V-PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~-~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+ .+|.|+||++.. . ..++.|||+|++||+|||+.+  ++||+|+|+|+|.+++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~~--~~sFsT~F~F~I~~~~   79 (233)
T 1n47_A            2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT--LASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSSC--BCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEeccCcCCCccCCCeEEEEECCCEeccCCCC--cCCEEEEEEEEEeCCC
Confidence            45799999998  689999999999 579999999742 1 147899999999999999877  9999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      ...+||||||||+|....+++.|+||||+|.++ ++.+++|||||||++|. | ||++||||||+||+.|.++.++    
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~~~g~~LGl~n~~~~~~~n~~vAVEFDT~~N~-~-Dp~~nHvGIdvns~~S~~~~~~----  153 (233)
T 1n47_A           80 AAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQTVAVEFDTYSNA-W-DPNYTHIGIDTNGIESKKTTPF----  153 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCCCCCGGGTTTCSSSSCCGGGCCEEEEEECSCCT-T-SCSSCEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCccCceEEEEeccccCC-C-CCCCCcEEEccCCccccccccc----
Confidence            778899999999998765668899999998753 33489999999999998 4 9999999999999999988775    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~  253 (645)
                       ++.+|+.++|||+||+.+++|+|+|++... +..|+|+..+||+.+||++|||||||+||..   .|.|+|++|+|+++
T Consensus       154 -~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~s~  231 (233)
T 1n47_A          154 -DMVYGEKANIVITYQASTKALAASLVFPVS-QTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             -CCCTTSCEEEEEEEETTTTEEEEEEEETTT-TEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEeCCCCEEEEEEecCCC-CCcceEEEEechHHhCCCceEEEEEeccCCCccccceeEEEEEEEEee
Confidence             577999999999999999999999998653 3578999999999999999999999999998   99999999999875

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=100.00  E-value=8.2e-57  Score=446.64  Aligned_cols=222  Identities=32%  Similarity=0.536  Sum_probs=198.9

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      .+++|+|++|.  ..||+|+|||.+. +|.|+||++..+   ..++.|||+|++||+|||+ +|+++||+|+|+|+|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~G~a~y~~Pv~l~~~-~g~~~sFst~F~F~I~~~   80 (240)
T 2fmd_A            2 NSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SSLVASFETTFTFSISQG   80 (240)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TCSEEEEEEEEEEECCBS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEcCCCCEEeCCCCcCCcccCCCeEEEEECCCEEeeCC-CCCcCcEEEEEEEEEecC
Confidence            46799999998  6899999999994 799999997421   1378999999999999999 999999999999999987


Q ss_pred             CCCCCCCceEEEEecCCCCCC--CCCCccccccCCC--CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCC
Q 041096           97 NPSSFGDGLAFFISPDNQILG--SAGGCLGLVNSSQ--LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADP  172 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~--~~g~~lGl~~~~~--~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~  172 (645)
                       ...+||||||+|+|....++  +.|++|||+|.++  ++.+++|||||||++|.+++||++||||||+|++.|.++.++
T Consensus        81 -~~~~gdGlAF~l~p~~~~p~~g~~g~~LGl~n~~~~~~~~n~~vAVEfDT~~N~~~~Dp~~nHvgIdvns~~S~~s~~~  159 (240)
T 2fmd_A           81 -SSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKW  159 (240)
T ss_dssp             -SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSCCC----CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC
T ss_pred             -CCCCCCcEEEEEecCCCCCCccCCCCcccccccCcCCCCcCcEEEEEeccccccccCCCCCCceeeccccccccceeEE
Confidence             67789999999999877543  7899999998764  345899999999999998679999999999999999988775


Q ss_pred             CccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeee
Q 041096          173 ILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT  252 (645)
Q Consensus       173 ~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~  252 (645)
                           ++.+|+.++|||+||+.+++|+|+|++...  ..|+|+..+||+.+||++|||||||+||...|.|+|++|+|++
T Consensus       160 -----~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s  232 (240)
T 2fmd_A          160 -----DWQNGKTATAHISYNSASKRLSVVSSYPNS--SPVVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS  232 (240)
T ss_dssp             -----CCCSSCEEEEEEEEETTTTEEEEEEECTTS--CCEEEEEECCGGGTSCSEEEEEEEEECCSSCBCCEEEEEEEEE
T ss_pred             -----EeeCCCEEEEEEEEeCCCCEEEEEEecCCC--CceEEEEEechHHhCCCceEEEEEeccCCccccEEEEEEEeEe
Confidence                 477899999999999999999999997654  5789999999999999999999999999999999999999988


Q ss_pred             c
Q 041096          253 S  253 (645)
Q Consensus       253 ~  253 (645)
                      .
T Consensus       233 ~  233 (240)
T 2fmd_A          233 S  233 (240)
T ss_dssp             E
T ss_pred             c
Confidence            6

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=5.5e-57  Score=442.85  Aligned_cols=218  Identities=30%  Similarity=0.459  Sum_probs=195.6

Q ss_pred             CceeEEeCCCCCCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCC
Q 041096           23 NNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSF  101 (645)
Q Consensus        23 ~~~~f~~~~f~~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  101 (645)
                      ..++|+|++|...||+|+|||.+. +|.|+||++.....+++|||+|++||+|||+.+|+++||+|+|+|+|.+++...+
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~~g~vaSFsT~F~F~I~~~~~~~~   81 (226)
T 1avb_A            2 NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIENS   81 (226)
T ss_dssp             EEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTSC
T ss_pred             cceEEEcCCCCccCEEEeccEEECCCCEEEeCCCCCCccCCeEEEEeCCCEEeecCCCCCcccEEEEEEEEEeCCCCCCC
Confidence            357899999999999999999995 8999999874223578999999999999999999999999999999999877789


Q ss_pred             CCceEEEEecCCCCCCCCCCccccccCCCC-CCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccC
Q 041096          102 GDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLK  180 (645)
Q Consensus       102 g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~-~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~  180 (645)
                      ||||||||+|....+++.|+||||+|.+++ ..+++|||||||+         +|||||||||+.|.++.++   +..+.
T Consensus        82 gdGlAF~l~p~~~~p~~~g~~LGl~n~~~~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~~---~~~l~  149 (226)
T 1avb_A           82 AYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAVVFDTV---------SNRIEIDVNSIRPIATESC---NFGHN  149 (226)
T ss_dssp             CEEEEEEEEETTCCCCCCGGGTTTCSCSSCCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEEC---CSGGG
T ss_pred             CCcEEEEEecCCCCCCCCCCcccccccCCCCCcccEEEEEecCc---------CCccceeecCcccCccccC---Ccccc
Confidence            999999999987756688999999987533 3489999999998         5999999999999998887   35677


Q ss_pred             CCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeec
Q 041096          181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTS  253 (645)
Q Consensus       181 ~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~  253 (645)
                      +|+.++|||+||+.+++|+|+|++.+. +..|+|+..+||+.+||++|||||||+||..   .|.|+|++|+|+++
T Consensus       150 ~g~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~h~IlsWsF~s~  224 (226)
T 1avb_A          150 NGEKAEVRITYDSPKNDLRVSLLYPSS-EEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             TTCEEEEEEEEEGGGTEEEEEEEETTT-TEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEEEE
T ss_pred             CCCeEEEEEEEeCCCcEEEEEEeecCC-CccceEEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEEee
Confidence            999999999999999999999997653 3479999999999999999999999999999   99999999999874

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=1.7e-55  Score=435.71  Aligned_cols=217  Identities=26%  Similarity=0.401  Sum_probs=193.2

Q ss_pred             CceeEEeCCCCCCC-eEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFNLRN-ITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~~~~-~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|...| |+|+|||.+. +|.|+||++..+   ..++.|||+|++||+|||+.  +++||+|+|+|+|.+++
T Consensus         2 ~~~~F~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pi~l~d~~--~vaSFsT~F~F~I~~~~   79 (240)
T 1ioa_A            2 TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN--NVASFNTNFTFIIRAKN   79 (240)
T ss_dssp             CCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCSS--CBEEEEEEEEEECCBSC
T ss_pred             cceEEEcCCCCCCCcEEEccceEECCCCeEEeCCCCCCCccccCceEEEEECCCEEccCCC--ccccEEEEEEEEEeCCC
Confidence            46799999999999 9999999995 899999987431   12689999999999999986  89999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      ...+||||||||+|....+++.|+||||+|.++ +..+++|||||||+         +|||||||||+.|.++.+|   +
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~~~g~~LGL~n~~~~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~~---~  147 (240)
T 1ioa_A           80 QSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNARTVAVVFNTF---------KNRIDFDKNFIKPYVNENC---D  147 (240)
T ss_dssp             TTSCCEEEEEEEEETTCCCCCCGGGTTTCCCSSCCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEEC---C
T ss_pred             CCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCCcCcEEEEEecCc---------CCceeeeeCCccccccccC---C
Confidence            778999999999998775668899999998753 23489999999998         5999999999999998886   3


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~  253 (645)
                      ..+.+|+.++|||+||+.+++|+|+|++.+. +..|+|+..+||+.+||++|||||||+||..   .|.|+|++|+|++.
T Consensus       148 ~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~H~IlsWsF~s~  226 (240)
T 1ioa_A          148 FHKYNGEKTDVQITYDSSNNDLRVFLHFTVS-QVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSSK  226 (240)
T ss_dssp             HHHHCSSCEEEEEEEETTTTEEEEEEEETTT-CCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEEEE
T ss_pred             ccccCCCEEEEEEEEeCCCcEEEEEEecCCC-CccceeEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEEee
Confidence            5677899999999999999999999997653 4489999999999999999999999999999   99999999999986


Q ss_pred             C
Q 041096          254 G  254 (645)
Q Consensus       254 ~  254 (645)
                      .
T Consensus       227 ~  227 (240)
T 1ioa_A          227 F  227 (240)
T ss_dssp             E
T ss_pred             C
Confidence            3

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=100.00  E-value=4.1e-52  Score=405.98  Aligned_cols=199  Identities=25%  Similarity=0.383  Sum_probs=175.1

Q ss_pred             CceeEEeCCCCCCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCC
Q 041096           23 NNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSF  101 (645)
Q Consensus        23 ~~~~f~~~~f~~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  101 (645)
                      ..++|+|++|...||+|+|||.+. +|.|+||+.   ..++.|||+|++||+|||+.+|+++||+|+|+|+|.+++...+
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~---~~~~~Gra~y~~Pi~l~~~~~g~vaSFsT~F~F~I~~~~~~~~   78 (223)
T 1dhk_B            2 TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANS   78 (223)
T ss_dssp             CCCEEEESSCCGGGEEEESSEEECTTSCEEESSS---CSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---C
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEcCCC---CCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEeCCCCCCC
Confidence            457999999999999999999995 899999986   4679999999999999999999999999999999998877788


Q ss_pred             CCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccCC
Q 041096          102 GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKS  181 (645)
Q Consensus       102 g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~~  181 (645)
                      ||||||||+|....++                +++|||||||+         +||||||+||+ |.++.+|   +..+.+
T Consensus        79 gdGlAF~l~p~~~~p~----------------~~~vAVEFDT~---------~nHVGIdvNsi-S~~~~~~---~~~l~~  129 (223)
T 1dhk_B           79 AVGLDFVLVPVQPESK----------------GDTVTVEFDTF---------LSRISIDVNNN-DIKSVPW---DVHDYD  129 (223)
T ss_dssp             CSEEEEEEEEC----------------------CCEEEEEETT---------TTEEEEEETTE-EEEEEEC---CGGGTT
T ss_pred             CCceEEEEecCCCCCC----------------ccEEEEEecCC---------CCcccccCCcc-ccccccC---CccccC
Confidence            9999999999765321                34899999998         59999999999 9988876   456779


Q ss_pred             CCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeecC
Q 041096          182 GNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTSG  254 (645)
Q Consensus       182 g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~~  254 (645)
                      |+.++|||+||+.+++|+|+|++.+. +..|+++..+||+.+||++|||||||+||..   .|.|+|++|+|++..
T Consensus       130 g~~~~v~I~Yd~~~~~L~V~l~~~~~-~~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~~  204 (223)
T 1dhk_B          130 GQNAEVRITYNSSTKVFSVSLSNPST-GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSKF  204 (223)
T ss_dssp             TSCEEEEEEEETTTTEEEEEEECTTT-CCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEEEC
T ss_pred             CCEEEEEEEEeCCCCEEEEEEecCCC-CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEEEecc
Confidence            99999999999999999999997653 3489999999999999999999999999999   999999999999863

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.2e-52  Score=435.56  Aligned_cols=249  Identities=24%  Similarity=0.406  Sum_probs=209.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...++||+|+||+||+|++..     ++..||||+++.. ....++|.+|+++|++++|||||+++|+|.+.+.+||
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            356677899999999999998753     5789999999764 4456789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCC-----------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          422 VYEYMPNGSLDRMLYQDSEN-----------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      |||||++|+|.++|+.....           ..+++|.+++.|+.|||+||+|||+   ++|+||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence            99999999999999865321           2359999999999999999999999   999999999999999999999


Q ss_pred             eeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      ||+|..              ....||+.|||||++.+..++.++|||||||+||||+| |+.||......    .++.  
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~--  271 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAID--  271 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHH--
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHH--
Confidence            998822              22468999999999999999999999999999999999 89999764321    1111  


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                                 .+....+...+..++..+.+|+..||+.||++||||+||++.|+.+.+.|
T Consensus       272 -----------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          272 -----------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             -----------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             -----------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence                       11122223445566778899999999999999999999999999776543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.1e-52  Score=432.69  Aligned_cols=246  Identities=25%  Similarity=0.435  Sum_probs=205.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...+.||+|+||+||+|++..     ++..||||+++.. ....++|.+|+++|++++|||||+++|+|.+++..||
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            467778999999999999998753     5788999999763 4456789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcC---------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          422 VYEYMPNGSLDRMLYQDS---------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      |||||++|+|.++|+...         .....++|.+++.|+.|||+||+|||+   ++|+||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence            999999999999997643         223459999999999999999999999   99999999999999999999999


Q ss_pred             eccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHh
Q 041096          493 ESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       493 ~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      +|..              ....||++|||||++.++.|+.++|||||||+||||+| |+.||......    .+..    
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~----  241 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIE----  241 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH----
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH----
Confidence            8821              12358999999999999999999999999999999999 89999765321    1111    


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                               .+........+..++..+.+++..||+.||++||||++|++.|+++.
T Consensus       242 ---------~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          242 ---------CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             ---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------HHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                     11122223445566778899999999999999999999999998654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=9e-52  Score=429.80  Aligned_cols=244  Identities=25%  Similarity=0.387  Sum_probs=204.4

Q ss_pred             CCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +++..+.||+|+||+||+|.+.     .++..||||+++..  ....++|.+|+.++++++|||||+++|+|.+.+.++|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3455788999999999999974     35689999998763  3346789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC
Q 041096          422 VYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN  489 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~  489 (645)
                      |||||++|+|.++|......            ...++|.++++|+.|||+||+|||+   ++|+||||||+||||++++.
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCC
Confidence            99999999999999754321            2359999999999999999999999   99999999999999999999


Q ss_pred             eeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHH
Q 041096          490 ARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       490 ~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~  554 (645)
                      +||+|..              +...||++|||||++.++.++.++|||||||+||||+| |+.||......    .+.  
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----~~~--  257 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----DVV--  257 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH----HHH--
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH----HHH--
Confidence            9998821              22468999999999999999999999999999999998 89999765321    122  


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                                 +.+........+.+++..+.+++..||+.||++||||+||++.|+..
T Consensus       258 -----------~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          258 -----------EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             -----------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             -----------HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                       12222222345566778899999999999999999999999999854

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.7e-50  Score=416.30  Aligned_cols=244  Identities=23%  Similarity=0.403  Sum_probs=197.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +++...++||+|+||+||+|++..   .||||+++.   ..+..+.|.+|++++++++|||||+++|+|.+ +.++||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            467778999999999999998753   589998865   33446789999999999999999999999865 56899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      ||++|+|.++|+....   .++|.+++.|+.|||+||+|||+   ++|+||||||+||||++++.+||+|..        
T Consensus       112 y~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             cCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            9999999999976543   39999999999999999999999   999999999999999999999998822        


Q ss_pred             ------cccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ------TLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                            ...+||+.|||||++.+   +.|+.++|||||||+||||+||+.||.......   .+...+.....       
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~---~~~~~~~~~~~-------  255 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVGRGYA-------  255 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHTTCC-------
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH---HHHHHHhcCCC-------
Confidence                  22479999999999864   468999999999999999999999997643211   11111111110       


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                       .+.+ ...+.+++..+.+++..||+.||++||||.||++.|+.+.
T Consensus       256 -~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          256 -SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             -CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             -CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence             1111 1234456678889999999999999999999999887553

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*

Probab=100.00  E-value=4.6e-48  Score=364.79  Aligned_cols=174  Identities=32%  Similarity=0.607  Sum_probs=157.8

Q ss_pred             CceeEEeCCCC--CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSS  100 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  100 (645)
                      .+++|+|++|.  ..||+|+|||...+|.|+||+.   ...++|||+|++||+||++.+|+++||+|+|+|.|.+.+...
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~~~~g~l~LT~~---~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~~   78 (181)
T 2ltn_A            2 ETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKA---VKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYN   78 (181)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEECSSSEEEECS---CSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTS
T ss_pred             cceEEEcCCCCCCCCCEEEeccccCCCCCeEcCCC---CCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCCC
Confidence            45799999998  6899999999966899999997   357899999999999999999999999999999999887778


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCC--CCeeeeecCCcccccccCCCcccc
Q 041096          101 FGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPD--ENHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus       101 ~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~--~~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      +||||||||+|....+++.||||||+|.++ ++.+++|||||||++|.+| ||+  +|||||||||+.|.++.+|     
T Consensus        79 ~gdGlAF~l~p~~~~p~~~g~~LGL~n~~~~~~~n~~vAVEFDT~~n~~~-Dp~~~~nHVGIdvNs~~S~~t~~~-----  152 (181)
T 2ltn_A           79 VADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAW-DPSNRDRHIGIDVNSIKSVNTKSW-----  152 (181)
T ss_dssp             CCCEEEEEEEETTCCCCCCGGGTTTCSCSSCCTTSCCEEEEEECSCCTTT-SCTTCCCEEEEEESSSSCSEEEEC-----
T ss_pred             CCCceEEEEecCCCCCCCCCccccccccCCCCccccEEEEEecccccccc-CCCCCCCEEEEEcCCccccceecc-----
Confidence            899999999998775568899999998753 3458999999999999984 999  9999999999999998886     


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeC
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYS  205 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~  205 (645)
                      ++.+|+.++|||+||+.+++|+|+|+|+
T Consensus       153 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~  180 (181)
T 2ltn_A          153 KLQNGEEANVVIAFNAATNVLTVSLTYP  180 (181)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             ccCCCCEEEEEEEEECCCCEEEEEEecC
Confidence            4779999999999999999999999875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.5e-49  Score=417.52  Aligned_cols=253  Identities=24%  Similarity=0.358  Sum_probs=208.1

Q ss_pred             HHHHHHhcCCCcCceeccCCceEEEEEEECCC-----CeEEEEEeccCC--cchhHhHHHHHHHHhhcCC-CCeeeeeee
Q 041096          341 RELRSATRGFHSNRILGRGAFGNVYKAYFASS-----GSVAAVKRSKHS--HEGKTEFLAELSIIACLRH-KNLVQLLGW  412 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H-~niv~l~g~  412 (645)
                      .+++...++|+..+.||+|+||+||+|.+...     ++.||||++...  ....++|.+|+++|.+++| ||||+++|+
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            34444557889999999999999999997643     368999998763  3345679999999999975 899999999


Q ss_pred             eeeC-CeEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 041096          413 CAEK-GELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKA  479 (645)
Q Consensus       413 ~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp  479 (645)
                      |.+. +.++||||||++|+|.++|+....            ....++|.+++.++.|||+||+|||+   ++|+||||||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~  213 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA  213 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCc
Confidence            9764 578999999999999999976432            12458999999999999999999999   9999999999


Q ss_pred             CcEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccc
Q 041096          480 SNIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETE  544 (645)
Q Consensus       480 ~NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~  544 (645)
                      +||||++++.+||+|..              +..+||+.|||||++.++.|+.++|||||||+||||+| |+.||.....
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999998822              12368999999999999999999999999999999998 9999976432


Q ss_pred             ccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          545 GHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       545 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...   +             ...+....+...+..+...+.+++..||+.||++||||.||++.|+.+
T Consensus       294 ~~~---~-------------~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          294 DEE---F-------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             SHH---H-------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHH---H-------------HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            211   1             122222233344555667888999999999999999999999998765

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.3e-48  Score=410.63  Aligned_cols=238  Identities=24%  Similarity=0.333  Sum_probs=195.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||+||+|+...+++.||||++...   ....+.+.+|+++|++|+|||||++++++.+.+.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999999999999999998653   3345679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      ||++|+|.++|.....  ..+++.+.+.++.||+.||+|||+   ++|+||||||+||||+.++.+||.|..        
T Consensus       104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            9999999999975432  347899999999999999999999   999999999999999999999998832        


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...+||+.|||||++.+..|+.++|||||||+||||++|+.||...+..    .+...+            +....
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~~i------------~~~~~  242 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK----NLVLKI------------ISGSF  242 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHH------------HHTCC
T ss_pred             cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHH------------HcCCC
Confidence                2246999999999999999999999999999999999999999764321    111111            11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       ...+......+.+++..||+.||++|||++|+++
T Consensus       243 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          243 -PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1122334556788999999999999999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.5e-48  Score=405.63  Aligned_cols=253  Identities=23%  Similarity=0.309  Sum_probs=195.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----eEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----ELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~  423 (645)
                      +++...++||+|+||+||+|++.  |+.||||++.........+..|+..+.+++|||||+++|+|.+.+    ++||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            45677889999999999999985  899999998764443344456677778899999999999998764    689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      |||++|+|.++|+...     ++|.++++++.|+|+||+|||+.+     .++|+||||||+|||||.++.+||+|..  
T Consensus        81 Ey~~~gsL~~~l~~~~-----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             ECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             cCCCCCcHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            9999999999997643     899999999999999999999731     2499999999999999999999998832  


Q ss_pred             --------------cccccCCcccCcccccCC------CCCcchhHHHHHHHHHHHHcCCCCCCccccccchh-h-----
Q 041096          497 --------------TLTAGTMGYLAPEYLQYG------TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV-N-----  550 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~~------~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~-~-----  550 (645)
                                    ...+||+.|||||++.+.      .++.++|||||||+||||+||+.|+.......... .     
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence                          123699999999999764      36789999999999999999988775433211100 0     


Q ss_pred             -HHHHHHhhhccCchhHHhhhhccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          551 -LVDWVWGLYAEGRIIEAADKRLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       551 -l~~~~~~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                       ......        ....+..++...+     .+++..+.+++..||+.||++||||.||++.|+.+.+.
T Consensus       236 ~~~~~~~--------~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          236 PSVEEMR--------KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCHHHHH--------HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             chHHHHH--------HHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence             000000        0111222222222     35677899999999999999999999999999876543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.4e-48  Score=406.00  Aligned_cols=243  Identities=23%  Similarity=0.301  Sum_probs=202.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +.|+..+.||+|+||+||+|+...+|+.||||++... ....+.+.+|+++|++++|||||++++++.+.+.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4588889999999999999999999999999998653 334567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------  495 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------  495 (645)
                      ++|+|.+++.+..     +++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||.|.           
T Consensus       154 ~gg~L~~~l~~~~-----l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          154 EGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             TTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             CCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence            9999999997532     8999999999999999999999   99999999999999999999999882           


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                       ....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+..    .+...+..         ...+.+  
T Consensus       226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~---------~~~~~~--  290 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRD---------NLPPRL--  290 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH---------SSCCCC--
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHc---------CCCCCC--
Confidence             23357999999999999999999999999999999999999999764321    11111111         000111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      .........+.+++..||+.||++|||++|+++  +|.+..
T Consensus       291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence            112233456788899999999999999999987  455443

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.5e-48  Score=402.99  Aligned_cols=239  Identities=22%  Similarity=0.229  Sum_probs=201.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +.|...++||+|+||+||+|++..+++.||||+++...    ...+|+.++++++|||||++++++.+++.+|||||||+
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            46778889999999999999999999999999987532    23579999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~----------  496 (645)
                      +|+|.++|.+...    +++.++..++.||+.||+|||+   ++|+||||||+||||+.++ .+||.|..          
T Consensus       134 gg~L~~~l~~~~~----l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          134 GGSLGQLIKQMGC----LPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             TCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             CCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            9999999986543    9999999999999999999999   9999999999999999987 59998832          


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...+||+.|||||++.+..|+.++|||||||+||||++|+.||...........+..       ..       
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~-------~~-------  272 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS-------EP-------  272 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH-------SC-------
T ss_pred             ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc-------CC-------
Confidence                   113699999999999999999999999999999999999999986544332221111       00       


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +. ....+.+....+.+++..||+.||++|||+.|+++.|...
T Consensus       273 ~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          273 PP-IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             CG-GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            00 0123344556788889999999999999999999887643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.8e-48  Score=395.98  Aligned_cols=234  Identities=22%  Similarity=0.356  Sum_probs=189.7

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEEEEE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELLLVY  423 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~  423 (645)
                      +..+.||+|+||+||+|.+..++..||+|++..   .....+.|.+|++++++|+|||||+++++|.+    ++.+||||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            456779999999999999999999999998865   33445679999999999999999999999865    34689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEcC-CCCeeeecc-----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLDA-NFNARLESS-----  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld~-~~~~kl~d~-----  495 (645)
                      |||++|+|.++|.+...    +++..+..++.||++||+|||+   ++  |+||||||+||||+. ++.+||+|.     
T Consensus       109 Ey~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             eCCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence            99999999999986543    8999999999999999999998   66  999999999999985 789999882     


Q ss_pred             -----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....+||+.|||||++.+ +|+.++|||||||+||||+||+.||......   ..+...+    ..+...    .
T Consensus       182 ~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---~~~~~~i----~~~~~~----~  249 (290)
T 3fpq_A          182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQIYRRV----TSGVKP----A  249 (290)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HHHHHHH----TTTCCC----G
T ss_pred             CCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---HHHHHHH----HcCCCC----C
Confidence                 223479999999998864 6999999999999999999999999754321   1111111    111000    0


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          .++......+.+++..||+.||++|||++|+++
T Consensus       250 ----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                111112345778889999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.5e-47  Score=407.27  Aligned_cols=242  Identities=23%  Similarity=0.302  Sum_probs=203.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +.|+..+.||+|+||.||+|....+|+.||||++... ....+.+.+|+.+|++++|||||++++++.+.+.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5688899999999999999999999999999998763 344567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------  495 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------  495 (645)
                      ++|+|.+++....     +++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||.|.           
T Consensus       231 ~gG~L~~~i~~~~-----l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          231 EGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             TTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             CCCcHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence            9999999997542     8999999999999999999999   99999999999999999999999882           


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                       ....+||+.|||||++.+..|+.++|||||||++|||++|+.||......    .+...+..         ...+.+  
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~---------~~~~~~--  367 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRD---------NLPPRL--  367 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH---------SCCCCC--
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHc---------CCCCCC--
Confidence             22357999999999999999999999999999999999999999764321    11111111         001111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .........+.+++..||+.||++|||++|+++  +|.+.
T Consensus       368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence            111223456778889999999999999999987  46544

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.6e-47  Score=395.94  Aligned_cols=234  Identities=22%  Similarity=0.299  Sum_probs=199.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..++||+|+||+||+|+...+++.||||++.+.    ....+.+.+|+++|++++|||||++++++.+.+.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4688999999999999999999999999999998652    234567999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      |||++|+|.+++.+...    +++.+...++.||+.||+|||+   ++|+||||||+||||+.++.+||.|..       
T Consensus       112 Ey~~gG~L~~~i~~~~~----l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~  184 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  184 (311)
T ss_dssp             CCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             ecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence            99999999999986543    9999999999999999999999   999999999999999999999998821       


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...+||+.|||||++.+..|+.++||||+||+||||++|+.||...+..    .+...+            ..
T Consensus       185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i------------~~  248 (311)
T 4aw0_A          185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKI------------IK  248 (311)
T ss_dssp             TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HH
T ss_pred             CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH------------Hc
Confidence                   2347999999999999999999999999999999999999999764321    111111            11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF  606 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl  606 (645)
                      ..  -.++......+.+++..|++.||++|||++|++
T Consensus       249 ~~--~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          249 LE--YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             TC--CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CC--CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            11  122333345678889999999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=8.1e-47  Score=385.19  Aligned_cols=238  Identities=23%  Similarity=0.355  Sum_probs=191.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||+|....+++.||||++.+.    ....+.+.+|++++++++|||||++++++.+.+..||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999999999999999998653    233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+ +|+|.+++.++..    +++.+...++.||+.||+|||+   ++|+||||||+||||+.++.+||+|..       
T Consensus        93 Ey~-~g~L~~~l~~~~~----l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             ECC-CEEHHHHHHHSCS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             eCC-CCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            999 7899999976543    9999999999999999999999   999999999999999999999998822       


Q ss_pred             ----cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ...+||+.|||||++.+..+ +.++||||+||++|||++|+.||...+..    .+...+            ....
T Consensus       165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~----~~~~~i------------~~~~  228 (275)
T 3hyh_A          165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLFKNI------------SNGV  228 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHTC
T ss_pred             CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHHHH------------HcCC
Confidence                23579999999999998876 57999999999999999999999764321    111111            0111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                        ..++......+.+++..||+.||++|||++|+++  .++.
T Consensus       229 --~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          229 --YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence              1222333456778899999999999999999987  4543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=7.1e-47  Score=390.85  Aligned_cols=235  Identities=22%  Similarity=0.292  Sum_probs=192.0

Q ss_pred             cCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..+.||+|+||+||+|+..   .+++.||||++...   ......+.+|+++|++++|||||++++++.+.+.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46899999999999999999873   45789999998763   2334568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc------
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS------  495 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~------  495 (645)
                      |||||++|+|.++|.+...    +++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||.|.      
T Consensus       104 vmEy~~gg~L~~~l~~~~~----l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             EEEcCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            9999999999999987543    9999999999999999999999   99999999999999999999999882      


Q ss_pred             ------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 ------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            ....+||+.|||||++.+..|+.++||||+||+||||++|+.||...+..+    +...+            ..
T Consensus       177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~i------------~~  240 (304)
T 3ubd_A          177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTMI------------LK  240 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH------------HH
T ss_pred             cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHHH------------Hc
Confidence                  223579999999999999999999999999999999999999997643221    11111            11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      ..  ..++......+.+++..||+.||++|||     ++|+++
T Consensus       241 ~~--~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          241 AK--LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CC--CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            11  1233334556788999999999999998     467764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.8e-45  Score=381.10  Aligned_cols=238  Identities=23%  Similarity=0.340  Sum_probs=189.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--------
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--------  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--------  417 (645)
                      ++|+..+.||+|+||+||+|+...+++.||||++...  ....+.+.+|+++|++|+|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4588899999999999999999999999999988653  334567999999999999999999999987644        


Q ss_pred             ----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          418 ----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       418 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                          .+|||||||++|+|.+++..... ....++..++.++.||++||+|||+   ++|+||||||+||||+.++.+||+
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~  160 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVG  160 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEc
Confidence                37999999999999999976543 2336778889999999999999999   999999999999999999999998


Q ss_pred             ccc------------------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh
Q 041096          494 SSF------------------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV  549 (645)
Q Consensus       494 d~~------------------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~  549 (645)
                      |..                        +..+||+.|||||++.+..|+.++|||||||++|||++   ||....+   ..
T Consensus       161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~  234 (299)
T 4g31_A          161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RV  234 (299)
T ss_dssp             CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HH
T ss_pred             cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HH
Confidence            832                        11369999999999999999999999999999999996   7754211   00


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCH---HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNE---DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~---~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ..+..            .    ....++.   +....+.+++..||+.||++|||+.|+++  .+++
T Consensus       235 ~~~~~------------~----~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          235 RTLTD------------V----RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             HHHHH------------H----HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             HHHHH------------H----hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence            11100            0    0112222   22344667899999999999999999987  4543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.4e-43  Score=371.76  Aligned_cols=282  Identities=40%  Similarity=0.707  Sum_probs=244.0

Q ss_pred             CCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeee
Q 041096          334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLG  411 (645)
Q Consensus       334 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g  411 (645)
                      ....++++++..++++|+..+.||+|+||.||+|... ++..||||++....  .....+.+|++++++++||||+++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            4567899999999999999999999999999999865 48899999987632  23447899999999999999999999


Q ss_pred             eeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       412 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      +|...+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            99999999999999999999999987766566799999999999999999999993333999999999999999999999


Q ss_pred             eecccc-------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc-cccchhhHHHHHHh
Q 041096          492 LESSFT-------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET-EGHKMVNLVDWVWG  557 (645)
Q Consensus       492 l~d~~~-------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~-~~~~~~~l~~~~~~  557 (645)
                      |.|...             ...||+.|+|||.+.+..++.++|||||||++|||++|+.||.... .......+.+|+..
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            987321             2348999999999998899999999999999999999999996432 12233456778877


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ...........+..+...+..++...+.+++..||+.||.+|||+++|+++|++.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~  313 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE  313 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred             HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence            77777788888888888899999999999999999999999999999999999754443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=378.41  Aligned_cols=267  Identities=22%  Similarity=0.272  Sum_probs=203.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeee------CCe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAE------KGE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~------~~~  418 (645)
                      ++|+..+.||+|+||+||+|.+..+|+.||||++....   ...+.+.+|+++|++++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            57899999999999999999999999999999987632   335678899999999999999999998754      367


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      +|||||||. |+|.+++....    .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++..|+.|..  
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeeccee
Confidence            999999995 78999997643    39999999999999999999999   999999999999999999999998722  


Q ss_pred             --------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh--
Q 041096          497 --------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY--  559 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~--  559 (645)
                                    ...+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....+........  
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~  285 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA  285 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence                          234799999999998875 569999999999999999999999987543322222221110000  


Q ss_pred             -----ccCchhHHhhhhccC--CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCCCCCCC
Q 041096          560 -----AEGRIIEAADKRLNG--AFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVPKLKP  623 (645)
Q Consensus       560 -----~~~~~~~~~d~~l~~--~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~p~~~~  623 (645)
                           ........+ ..+..  ..+     ......+.+++..||+.||++|||++|+++  +|++..++...|...+
T Consensus       286 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~~p~~~~  362 (398)
T 4b99_A          286 VIQAVGAERVRAYI-QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP  362 (398)
T ss_dssp             GTC-----CHHHHH-HSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGGSCCCSS
T ss_pred             Hhhhhhhhhhhhhh-hcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCccccCCCC
Confidence                 000000000 00000  000     011345678899999999999999999987  5766554444444333

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.1e-43  Score=367.62  Aligned_cols=272  Identities=36%  Similarity=0.675  Sum_probs=233.5

Q ss_pred             ccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      .+.+.++..++++|+..+.||+|+||.||+|.+. ++..||||++... ....+.+.+|++++++++||||++++++|.+
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            3445556667899999999999999999999975 5889999987763 4456789999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      .+..++||||+++|+|.+++.........++|.+++.++.|+++||+|||+   .+++||||||+|||++.++.+|+.|.
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence            999999999999999999997665444569999999999999999999999   99999999999999999999999873


Q ss_pred             c--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          496 F--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       496 ~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                      .              ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .......|.......
T Consensus       184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~  262 (321)
T 2qkw_B          184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNN  262 (321)
T ss_dssp             TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTT
T ss_pred             ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhcccc
Confidence            2              1234899999999999899999999999999999999999999765432 334556666555566


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      +.+.+.+++.+......+....+.+++..||+.||++|||++++++.|+...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            6666777777777788899999999999999999999999999999998653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.2e-42  Score=365.29  Aligned_cols=188  Identities=25%  Similarity=0.351  Sum_probs=164.8

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEE
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~  420 (645)
                      ...+.|+..++||+|+||+||+|+.+   .+++.||+|.+.... ....+.+|+++|..+ +|||||++++++.+.+++|
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            34578999999999999999999874   357889999887643 345688999999998 6999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeecccc--
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESSFT--  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~~~--  497 (645)
                      ||||||++|+|.+++..       +++.+...++.|++.||+|||+   ++|+||||||+||||+.+ +..||.|...  
T Consensus        97 lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             EEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999999842       8999999999999999999999   999999999999999877 6788877321  


Q ss_pred             --------------------------------------ccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCC
Q 041096          498 --------------------------------------LTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRP  538 (645)
Q Consensus       498 --------------------------------------~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P  538 (645)
                                                            ..+||+.|||||++.+. .++.++||||+||++|||++|+.|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence                                                  13699999999999875 589999999999999999999999


Q ss_pred             CCccc
Q 041096          539 IERET  543 (645)
Q Consensus       539 ~~~~~  543 (645)
                      |....
T Consensus       247 f~~~~  251 (361)
T 4f9c_A          247 FYKAS  251 (361)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            97543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=6.1e-42  Score=385.45  Aligned_cols=241  Identities=22%  Similarity=0.289  Sum_probs=199.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|..+.+|..||+|.+.... ...+.+.+|+++|++++|||||++++++.+.+.+||||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            368999999999999999999999999999999987643 3456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC--CCeeeeccc-------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN--FNARLESSF-------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~--~~~kl~d~~-------  496 (645)
                      |++|+|.++|.....   .+++.++..++.||+.||+|||+   ++|+||||||+||||+.+  +..||.|..       
T Consensus       236 ~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~  309 (573)
T 3uto_A          236 MSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  309 (573)
T ss_dssp             CCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred             cCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence            999999999965432   38999999999999999999999   999999999999999865  788998722       


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...+||+.|||||++.+..|+.++||||+||++|||++|+.||.......    ....+...          +..+
T Consensus       310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~----~~~~i~~~----------~~~~  375 (573)
T 3uto_A          310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRNVKSC----------DWNM  375 (573)
T ss_dssp             TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHTT----------CCCC
T ss_pred             CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHHHhC----------CCCC
Confidence                23479999999999999999999999999999999999999997654321    11111100          0000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...........+.+++..||+.||.+|||+.|+++
T Consensus       376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00111122345678889999999999999999988

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.4e-41  Score=349.63  Aligned_cols=246  Identities=23%  Similarity=0.402  Sum_probs=206.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|...++||+|+||+||+|.+..++..+|+|++.. .....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            567888999999999999999999999999998765 4455678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+|+.|...         
T Consensus        90 ~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           90 KGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             TTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             CCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            99999999987433   38999999999999999999999   9999999999999999999999987321         


Q ss_pred             -----------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          498 -----------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       498 -----------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                                       ...||+.|+|||.+.+..++.++||||||+++|||++|..|+...........          
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~----------  233 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG----------  233 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS----------
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh----------
Confidence                             34689999999999999999999999999999999999999875432211100          


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                       .......+..    .+...+..+.+++..||+.||++|||++++++.|+.+..
T Consensus       234 -~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          234 -LNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             -BCHHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -hhhhcccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence             0111122222    223344568889999999999999999999999986643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.8e-41  Score=352.27  Aligned_cols=255  Identities=28%  Similarity=0.434  Sum_probs=203.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ..++|+..+.||+|+||+||+|...  +..||||++....   ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3467888999999999999999874  7889999987633   3346789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      |||+++|+|.+++..... ...+++..++.++.|+++||+|||+   .+  |+||||||+|||++.++.+||.|..    
T Consensus       113 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             EECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             EecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            999999999999975432 2348999999999999999999998   78  9999999999999999999998732    


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......    ....+            .
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~----~~~~~------------~  252 (309)
T 3p86_A          189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ----VVAAV------------G  252 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHH------------H
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHH------------H
Confidence                    23468999999999999999999999999999999999999997643211    11111            0


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCCCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLK  622 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~~~  622 (645)
                      ........+......+.+++..||+.+|.+|||++++++.|+.......+|..+
T Consensus       253 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~~  306 (309)
T 3p86_A          253 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR  306 (309)
T ss_dssp             HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--------
T ss_pred             hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCCc
Confidence            011112334445567889999999999999999999999999887666555443

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.8e-41  Score=377.84  Aligned_cols=238  Identities=24%  Similarity=0.308  Sum_probs=194.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHH---HHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLA---ELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~---Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..++||+|+||+||+|+...+|..||||++.+.    ........+   ++.+++.++|||||++++++.+.+.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            5799999999999999999999999999999998652    122223333   466677889999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ||||||+||+|..+|.+...    +++..+..++.||+.||+|||+   ++|+||||||+|||||.++.+||.|.     
T Consensus       269 lVmEy~~GGdL~~~l~~~~~----l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGV----FSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeee
Confidence            99999999999999987543    8999999999999999999999   99999999999999999999999882     


Q ss_pred             -----ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           ....+||+.|||||++.. ..|+.++||||+||+||||++|+.||........ ..+....            ..
T Consensus       342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i------------~~  408 (689)
T 3v5w_A          342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMT------------LT  408 (689)
T ss_dssp             CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHH------------HH
T ss_pred             cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhh------------cC
Confidence                 234589999999999975 5799999999999999999999999976433221 1111111            11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .  ...++......+.+++..||+.||.+|++     ++||++
T Consensus       409 ~--~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          409 M--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             C--CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             C--CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            1  11233344556788899999999999998     688765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=5.3e-40  Score=341.28  Aligned_cols=269  Identities=34%  Similarity=0.569  Sum_probs=223.2

Q ss_pred             CcccCHHHHHHHhcCCCcC------ceeccCCceEEEEEEECCCCeEEEEEeccCC-----cchhHhHHHHHHHHhhcCC
Q 041096          335 PREFSYRELRSATRGFHSN------RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRH  403 (645)
Q Consensus       335 ~~~~~~~~l~~~~~~f~~~------~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l~H  403 (645)
                      ...|++.++..++++|...      +.||+|+||.||+|...  +..+|+|++...     ....+.+.+|+.++++++|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            4679999999999999988      89999999999999874  788999987652     2345679999999999999


Q ss_pred             CCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       404 ~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                      |||+++++++.+.+..++||||+++++|.+++..... ...++|..++.++.|++.||+|||+   .+++||||||+||+
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil  165 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL  165 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence            9999999999999999999999999999999975432 2358999999999999999999999   99999999999999


Q ss_pred             EcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh
Q 041096          484 LDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV  549 (645)
Q Consensus       484 ld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~  549 (645)
                      ++.++.+++.|..              ....||+.|+|||.+.+ .++.++||||||+++|||++|+.||..........
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  244 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL  244 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence            9999999998732              12368999999998864 58999999999999999999999998755443333


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .+.....  .....+.+.+++.+ ...+......+.+++..||+.+|.+|||+++|++.|+++.
T Consensus       245 ~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          245 DIKEEIE--DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHH--TTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHhh--hhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            3222111  11223344444444 3457788899999999999999999999999999998653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-41  Score=361.16  Aligned_cols=250  Identities=24%  Similarity=0.334  Sum_probs=204.9

Q ss_pred             cCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|...+.||+|+||.||+|.+.     .++..||||++..  .......+.+|+.++++++||||+++++++.+.+..+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            56888899999999999999953     4577899999875  3445567999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCC---CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeec
Q 041096          421 LVYEYMPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLES  494 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d  494 (645)
                      +||||+++|+|.+++.....   ....+++.+++.++.||++||+|||+   .+|+||||||+||||+.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence            99999999999999987542   22358999999999999999999999   9999999999999999554   489987


Q ss_pred             cc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhh
Q 041096          495 SF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       495 ~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                      ..              ....||+.|+|||++.+..++.++|||||||++|||++ |+.||......    .+.       
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~-------  296 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVL-------  296 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHH-------
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH-------
Confidence            21              22457889999999999999999999999999999998 99999764321    111       


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                            +.+........+......+.+++..||+.+|++|||+.+|++.|+.....+.
T Consensus       297 ------~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          297 ------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             ------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             ------HHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence                  1111212223344455678899999999999999999999999987765543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4.5e-41  Score=352.57  Aligned_cols=256  Identities=24%  Similarity=0.315  Sum_probs=201.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----eEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----ELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV  422 (645)
                      .++|+..++||+|+||+||+|++.  +..||||++.........+..|+.++.+++||||+++++++.+..    .+++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            467888999999999999999886  789999999776656667778999999999999999999998754    47999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC----------CeeeCCCCCCcEEEcCCCCeee
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ----------QVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~----------~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      |||+++|+|.+++....     ++|..++.++.|+++||+|||+   .          +|+||||||+|||++.++.+||
T Consensus       101 ~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             EECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred             EecCCCCCHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence            99999999999997643     8999999999999999999998   7          9999999999999999999999


Q ss_pred             eccc--------------cccccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          493 ESSF--------------TLTAGTMGYLAPEYLQYG-----TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       493 ~d~~--------------~~~~gt~~y~APE~~~~~-----~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                      +|..              ....||+.|+|||++.+.     .++.++|||||||++|||++|+.||......... ....
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~  251 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML-PFEE  251 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC-TTHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc-chhh
Confidence            8732              124689999999999863     4567899999999999999999999765432211 1111


Q ss_pred             HHHhhhccCchhHHh-hhhccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          554 WVWGLYAEGRIIEAA-DKRLNGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~-d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ..........+.+.+ ........     .......+.+++..||+.||++|||+++|++.|+.+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            100000000111111 11111111     2245677999999999999999999999999998653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.2e-40  Score=343.33  Aligned_cols=238  Identities=24%  Similarity=0.315  Sum_probs=199.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||+||+|....++..||||++... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            35799999999999999999999888999999988653 33456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++|+|.+++....     +++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..         
T Consensus        99 ~~~~~L~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           99 LAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CTTCBHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            99999999997642     8999999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||+.|+|||.+.+..++.++|||||||++|||++|+.||.........   ...    ..        .....
T Consensus       171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~----~~--------~~~~~  235 (297)
T 3fxz_A          171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL---YLI----AT--------NGTPE  235 (297)
T ss_dssp             CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHH----HH--------HCSCC
T ss_pred             cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHH----Hh--------CCCCC
Confidence               2346899999999999999999999999999999999999999764321111   000    00        00001


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+......+.+++..||+.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1223334566888999999999999999999986

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=5.4e-41  Score=352.56  Aligned_cols=245  Identities=25%  Similarity=0.417  Sum_probs=203.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.+..+   +..||||++..  .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            4677789999999999999999744   45699999876  334467899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+++|+|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+||||+.++.+||.|...     
T Consensus       129 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             eeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            999999999999975433   39999999999999999999999   9999999999999999999999987321     


Q ss_pred             ----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 ----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 ----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ...+|..|+|||++.+..++.++|||||||++|||++ |+.||......    .+.             +
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~-------------~  265 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVI-------------S  265 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHH-------------H
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHH-------------H
Confidence                      1234668999999999999999999999999999999 99999764321    111             1


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .+........+......+.+++..||+.||.+|||+++|++.|+.+...
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          266 SVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            1222222234445567788999999999999999999999999876543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=4.6e-41  Score=360.47  Aligned_cols=243  Identities=25%  Similarity=0.398  Sum_probs=204.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|...+.||+|+||.||+|.+..++..||||.+...  ....+.|.+|++++++++||||++++++|.+.+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            35678889999999999999999888999999998763  2345679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |+++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+++||||||+||||+.++.+||.|...       
T Consensus       193 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             CCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             cCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            9999999999976432   38999999999999999999999   9999999999999999999999988321       


Q ss_pred             -------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          498 -------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       498 -------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...++..|+|||.+..+.++.++|||||||++|||++ |+.||......    ..             .+.+.
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~-------------~~~~~  329 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QT-------------REFVE  329 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HH-------------HHHHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HH-------------HHHHH
Confidence                   1124667999999999999999999999999999998 99999764321    11             11222


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...+...+..++..+.+++..||+.||++|||++++++.|+.+
T Consensus       330 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            2222233445567788999999999999999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=5.1e-41  Score=359.61  Aligned_cols=245  Identities=27%  Similarity=0.458  Sum_probs=201.7

Q ss_pred             cCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|++.   ..+..||||++...  ....+.|.+|+.++++++||||++++++|.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            57888999999999999999886   45678999998763  33456899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccc----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL----  498 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~----  498 (645)
                      |||+++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+|+||||||+||||+.++.+|+.|....    
T Consensus       125 ~e~~~~~sL~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             EECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            999999999999976432   38999999999999999999999   99999999999999999999999873211    


Q ss_pred             -----------cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          499 -----------TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       499 -----------~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ..++..|+|||++.+..++.++|||||||++|||++ |+.||......    .             +.+
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~-------------~~~  261 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----D-------------VIK  261 (373)
T ss_dssp             ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----H-------------HHH
T ss_pred             cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----H-------------HHH
Confidence                       124668999999999999999999999999999998 99999764321    1             112


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .+........+..++..+.+++..||+.+|++||+|++|++.|+.....
T Consensus       262 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          262 AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            2223333334445667889999999999999999999999999876443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.8e-40  Score=353.46  Aligned_cols=247  Identities=24%  Similarity=0.383  Sum_probs=204.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-------CCCeEEEEEeccCCc--chhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-------SSGSVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-------~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      .++|...+.||+|+||.||+|.+.       ..+..||||++....  ...+.+.+|+++++++ +||||++++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            367888999999999999999864       245689999987642  3456799999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +..|+||||+++|+|.+++......            ...+++.+++.++.||++||+|||+   .+|+||||||+||||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence            9999999999999999999865421            2348999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++.+||.|..              ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......    
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----  312 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----  312 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence            999999998732              11245678999999999999999999999999999999 99999764321    


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .+.             ..+........+..+...+.+++..||+.+|.+||++.|+++.|+.+.
T Consensus       313 ~~~-------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          313 ELF-------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             GHH-------------HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH-------------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111             112222222344455677889999999999999999999999998653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=4.3e-40  Score=345.12  Aligned_cols=250  Identities=23%  Similarity=0.288  Sum_probs=206.4

Q ss_pred             CcccCHHHHHHHhcC----------CCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCC
Q 041096          335 PREFSYRELRSATRG----------FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRH  403 (645)
Q Consensus       335 ~~~~~~~~l~~~~~~----------f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H  403 (645)
                      +..+++++++.+++.          |+..+.||+|+||.||+|....++..||||++... ....+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            456889999988875          66678999999999999999888999999998763 3445678999999999999


Q ss_pred             CCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       404 ~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                      |||+++++++...+..++||||+++++|.+++...     .+++..+..++.|++.||+|||+   .+|+||||||+|||
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIl  173 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSIL  173 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEE
Confidence            99999999999999999999999999999998643     28999999999999999999999   99999999999999


Q ss_pred             EcCCCCeeeeccc------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          484 LDANFNARLESSF------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       484 ld~~~~~kl~d~~------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                      ++.++.+|+.|..            ....||+.|+|||++.+..++.++||||||+++|||++|+.||......    ..
T Consensus       174 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~  249 (321)
T 2c30_A          174 LTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QA  249 (321)
T ss_dssp             ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HH
T ss_pred             ECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH
Confidence            9999999998732            2246899999999999999999999999999999999999999764321    11


Q ss_pred             HHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       552 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......         ...+.+  .........+.+++..||+.||++|||++++++
T Consensus       250 ~~~~~~---------~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          250 MKRLRD---------SPPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHH---------SSCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHhc---------CCCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111110         000111  111223456788899999999999999999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=8.2e-41  Score=351.39  Aligned_cols=243  Identities=24%  Similarity=0.400  Sum_probs=196.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeE----EEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSV----AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..++||+|+||+||+|.+..++..    ||+|.+..  .....+.+.+|+.++++++||||++++++|.+.. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            5688899999999999999998766654    58887755  2345678999999999999999999999998764 789


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      |+||+++|+|.+++.....   .+++..++.++.|+++||+|||+   .+|+||||||+||||+.++.+||.|..     
T Consensus        94 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            9999999999999987543   38999999999999999999999   899999999999999999999998832     


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....||..|+|||++.+..++.++|||||||++|||++ |+.||.......                 +.+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~~  230 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------ISS  230 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------HHH
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----------------HHH
Confidence                     12245778999999999999999999999999999999 999997643221                 112


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+........+..+...+.+++..||+.+|.+||+++++++.|+....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          231 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            222222223344556678899999999999999999999999976544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.4e-40  Score=369.51  Aligned_cols=247  Identities=26%  Similarity=0.381  Sum_probs=211.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ..+|...+.||+|+||.||+|.+..++..||||.+.......++|.+|+.+|++++||||++++++|.+.+..+|||||+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            45678889999999999999999988999999999876667788999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++|+|.+++.....  ..+++..++.++.||++||+|||+   ++|+||||||+||||+.++.+||.|...         
T Consensus       299 ~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          299 TYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             TTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            99999999976432  348999999999999999999999   9999999999999999999999987321         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...++..|+|||++....++.++|||||||+||||++ |+.||......    .             +.+.+....
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~-------------~~~~~~~~~  436 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----Q-------------VYELLEKDY  436 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G-------------HHHHHHTTC
T ss_pred             eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----H-------------HHHHHHcCC
Confidence                1234678999999999999999999999999999999 99999764321    1             112222333


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      +...+..++..+.+++..||+.||++||||++|++.|+...+.
T Consensus       437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            3344555667889999999999999999999999999977543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.2e-40  Score=337.65  Aligned_cols=242  Identities=25%  Similarity=0.413  Sum_probs=204.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|.... +..||+|++.......+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecC-CCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            467888999999999999999874 7789999998877677889999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +++|.+++.....   .+++..++.++.|+++||+|||+   .+++||||||+||+++.++.+++.|..           
T Consensus        89 ~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  162 (269)
T 4hcu_A           89 HGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  162 (269)
T ss_dssp             TCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence            9999999976443   38999999999999999999999   999999999999999999999998732           


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        ....+|..|+|||.+.+..++.++||||||+++|||++ |+.||......    ....             .+.....
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~-------------~~~~~~~  225 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVE-------------DISTGFR  225 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH-------------HHHTTCC
T ss_pred             cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHH-------------HHhcCcc
Confidence              12345678999999999999999999999999999999 99999764321    1111             1111112


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ...+......+.+++..||+.+|++|||++++++.|+++.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          226 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            2223334566888999999999999999999999998654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.4e-40  Score=334.42  Aligned_cols=245  Identities=23%  Similarity=0.342  Sum_probs=204.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||.||+|.... +..||+|++.......+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            4578889999999999999998874 678999999887667788999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++.....   .+++.+++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|...         
T Consensus        86 ~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           86 SNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             TTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred             CCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence            99999999976533   38999999999999999999999   9999999999999999999999987321         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...+|..|+|||.+.+..++.++||||||+++|||++ |+.||.......    ...             .+....
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~-------------~~~~~~  222 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----VVL-------------KVSQGH  222 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHH-------------HHHTTC
T ss_pred             hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH----HHH-------------HHHcCC
Confidence                1235667999999998889999999999999999999 999997643211    111             111111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      ....+......+.+++..||+.+|++|||++++++.|+.+.+.
T Consensus       223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            1122223345688899999999999999999999999977653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.5e-40  Score=344.35  Aligned_cols=236  Identities=22%  Similarity=0.323  Sum_probs=199.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||.||+|.+..++..||||++...   ....+.+.+|++++++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46799999999999999999999889999999998653   334567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+|+.|..       
T Consensus        94 e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             CCCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             ECCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            99999999999976543    8999999999999999999999   999999999999999999999998732       


Q ss_pred             ----cccccCCcccCcccccCCCCC-cchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTAT-EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t-~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ...+||+.|+|||++.+..+. .++|||||||++|||++|+.||......    .+...+            ....
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i------------~~~~  230 (328)
T 3fe3_A          167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRERV------------LRGK  230 (328)
T ss_dssp             SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHCC
T ss_pred             CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH------------HhCC
Confidence                234689999999999988775 7999999999999999999999764321    111111            0111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ...+......+.+++..||+.||.+|||++|+++
T Consensus       231 --~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          231 --YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             --CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             --CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              1122334456778899999999999999999987

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.6e-40  Score=351.44  Aligned_cols=257  Identities=24%  Similarity=0.368  Sum_probs=208.4

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEE-----ECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeee
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAY-----FASSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQL  409 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~-----~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l  409 (645)
                      +...++....++|...+.||+|+||.||+|.     ...++..||||++...  ....+.+.+|++++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            4455666677899999999999999999998     4456689999998763  23456799999999999 79999999


Q ss_pred             eeeeeeCC-eEEEEEecCCCCCHhHHhhhcCCC-----------------------------------------------
Q 041096          410 LGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSEN-----------------------------------------------  441 (645)
Q Consensus       410 ~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~-----------------------------------------------  441 (645)
                      +++|.+.+ ..++||||+++|+|.+++......                                               
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            99998765 489999999999999999865421                                               


Q ss_pred             ---------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          442 ---------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       442 ---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                                     ...+++..++.++.|+++||+|||+   .+|+||||||+||||+.++.+||+|..          
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                           1228999999999999999999999   999999999999999999999998732          


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ....||+.|+|||++.+..++.++|||||||++|||++ |+.||........   +             ...+...
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~-------------~~~~~~~  312 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---F-------------CRRLKEG  312 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH---H-------------HHHHHHT
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH---H-------------HHHHHcC
Confidence                12357888999999999999999999999999999998 9999976433211   1             1111122


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .....+......+.+++..||+.||.+|||++++++.|+.+.
T Consensus       313 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            222333344567888999999999999999999999998653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.5e-40  Score=360.84  Aligned_cols=247  Identities=24%  Similarity=0.415  Sum_probs=207.0

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ...++|...+.||+|+||.||+|.+.. +..||||+++......+.|.+|++++++++||||+++++++. .+..++|||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            345678889999999999999999864 678999999886667889999999999999999999999987 567899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------  497 (645)
                      |+++|+|.+++.....  ..+++..++.++.||+.||+|||+   ++|+||||||+||||+.++.+||.|...       
T Consensus       263 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             CCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             ecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence            9999999999975431  238899999999999999999999   9999999999999999999999988321       


Q ss_pred             ------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          498 ------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       498 ------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ...++..|+|||++..+.++.++|||||||+||||++ |+.||......    .+.             +.+..
T Consensus       338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~-------------~~i~~  400 (454)
T 1qcf_A          338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVI-------------RALER  400 (454)
T ss_dssp             HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHH-------------HHHHH
T ss_pred             ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHH-------------HHHHc
Confidence                  1235678999999999999999999999999999999 99999764321    111             11222


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      ..+...+..++..+.+++..||+.||++||||++|++.|+.....
T Consensus       401 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          401 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            222233445667889999999999999999999999999987543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.1e-40  Score=335.96  Aligned_cols=244  Identities=19%  Similarity=0.324  Sum_probs=201.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV  422 (645)
                      ++|...+.||+|+||.||+|++.  +..+|||++...   ....+.+.+|+.++++++||||+++++++.+.  +..++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            56888899999999999999986  788999998763   33456799999999999999999999999877  788999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEcCCCCeeeec------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLDANFNARLES------  494 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld~~~~~kl~d------  494 (645)
                      |||+++|+|.+++.....  ..+++.+++.++.|+++||+|||+   .+  ++||||||+|||++.++.+++.+      
T Consensus        88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             EECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             ecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            999999999999976442  348999999999999999999998   77  99999999999999999999865      


Q ss_pred             -cccccccCCcccCcccccCCCCCc---chhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          495 -SFTLTAGTMGYLAPEYLQYGTATE---KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       495 -~~~~~~gt~~y~APE~~~~~~~t~---ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                       ......||+.|+|||.+.+..++.   ++||||||+++|||++|+.||........    .            ......
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~------------~~~~~~  226 (271)
T 3kmu_A          163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----G------------MKVALE  226 (271)
T ss_dssp             TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----H------------HHHHHS
T ss_pred             ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----H------------HHHHhc
Confidence             223356899999999998765544   89999999999999999999976432111    0            111112


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ......+......+.+++..||+.||++|||++++++.|+.+.+
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          227 GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            22223344456678899999999999999999999999986543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=5.6e-40  Score=346.40  Aligned_cols=251  Identities=26%  Similarity=0.393  Sum_probs=206.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      ..++|...+.||+|+||.||+|....     ++..||||.+...  ....+.+.+|+.++++++||||++++++|.+.+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            45788899999999999999999863     4589999998763  3345679999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC--------------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCC
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN--------------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIK  478 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk  478 (645)
                      .++||||+++|+|.+++......                    ...+++.+++.++.||++||+|||+   .+|+|||||
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlk  201 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA  201 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            99999999999999999864321                    1458999999999999999999999   999999999


Q ss_pred             CCcEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccc
Q 041096          479 ASNIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERET  543 (645)
Q Consensus       479 p~NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~  543 (645)
                      |+|||++.++.+|+.|..              ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  281 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  281 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence            999999999999998732              12357888999999999999999999999999999999 999997643


Q ss_pred             cccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          544 EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       544 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ..    .+...             +........+...+..+.+++..||+.||++||++.++++.|+++.+..
T Consensus       282 ~~----~~~~~-------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          282 HE----EVIYY-------------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HH----HHHHH-------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             hH----HHHHH-------------HhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            21    11111             1111111233445567889999999999999999999999999876643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6.6e-40  Score=339.22  Aligned_cols=251  Identities=23%  Similarity=0.285  Sum_probs=204.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..+.||+|+||.||+|....++..||+|.+...    ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35788999999999999999999988999999987542    23356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....    +++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..      
T Consensus        90 ~e~~~g~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             EECCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             EeCCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999999976543    8999999999999999999999   999999999999999999999998732      


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........       ........ ..    
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~-~~----  230 (294)
T 4eqm_A          163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-------AIKHIQDS-VP----  230 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-------HHHHHSSC-CC----
T ss_pred             cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhhcc-CC----
Confidence                   123589999999999999999999999999999999999999976432111       00111100 00    


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHcCCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARP-SMRRVFQILNNEAEPLV  617 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~~vl~~L~~~~~~~~  617 (645)
                       ........+.+..+.+++..|++.||++|| +++++.+.|+.......
T Consensus       231 -~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          231 -NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             -CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             -CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence             000112223456788899999999999998 89999999997765543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.3e-39  Score=334.43  Aligned_cols=243  Identities=23%  Similarity=0.379  Sum_probs=202.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||.||+|.+. ++..||+|++.......+++.+|++++.+++|+||+++++++.+.+..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            457888899999999999999887 4778999999887667788999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---------  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---------  497 (645)
                      ++++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+++.|...         
T Consensus       102 ~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  175 (283)
T 3gen_A          102 ANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  175 (283)
T ss_dssp             TTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred             CCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence            99999999976433   38999999999999999999999   9999999999999999999999988321         


Q ss_pred             ----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          498 ----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       498 ----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ...+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......    ..             +.+....
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~----~~-------------~~~~~~~  238 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TA-------------EHIAQGL  238 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HH-------------HHHHTTC
T ss_pred             ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH----HH-------------HHHhccc
Confidence                2245678999999999999999999999999999998 999997643211    11             1111222


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ....+......+.+++..||+.+|.+|||++++++.|+++.
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            22223334567888999999999999999999999997653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2e-39  Score=355.98  Aligned_cols=241  Identities=28%  Similarity=0.411  Sum_probs=203.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-eEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-ELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|.+.  +..||||+++... ..+.|.+|++++++++||||++++++|.+.+ ..++||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            356788899999999999999986  7899999987643 5678999999999999999999999987765 79999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++|+|.+++.....  ..+++..++.++.||++||+|||+   .+++||||||+||||+.++.+||.|..         
T Consensus       269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            999999999986542  237999999999999999999999   999999999999999999999998832         


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+    +             .+.+....+..
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----~-------------~~~i~~~~~~~  406 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----V-------------VPRVEKGYKMD  406 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT----H-------------HHHHHTTCCCC
T ss_pred             cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----H-------------HHHHHcCCCCC
Confidence            12356789999999999999999999999999999998 999997654321    1             11222222234


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .+..++..+.+++..||+.||++|||++++++.|+.+
T Consensus       407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            4555677889999999999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1e-39  Score=337.40  Aligned_cols=255  Identities=24%  Similarity=0.355  Sum_probs=204.4

Q ss_pred             cCCCcCceeccCCceEEEEEE----ECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAY----FASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~----~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~  420 (645)
                      ++|+..+.||+|+||.||+|.    ...++..||||++... ....+.+.+|++++++++||||++++++|...  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            578889999999999999998    4557899999998764 34457899999999999999999999998653  5689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---  497 (645)
                      +||||+++|+|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|...   
T Consensus        90 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            99999999999999976543   38999999999999999999999   9999999999999999999999987321   


Q ss_pred             ------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh----cc
Q 041096          498 ------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY----AE  561 (645)
Q Consensus       498 ------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~----~~  561 (645)
                                  ...++..|+|||.+.+..++.++||||||+++|||++|..|+......     .........    ..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~  238 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-----FMRMIGNDKQGQMIV  238 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH-----HHHHHCTTCCTHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH-----HHhhhcCccccchhH
Confidence                        123566799999999999999999999999999999999998653210     111000000    00


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ..+.+.+........+..++..+.+++..||+.||++|||++++++.|+.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            0122223333333445566778999999999999999999999999998654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-39  Score=339.81  Aligned_cols=242  Identities=21%  Similarity=0.277  Sum_probs=203.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|...+.||+|+||.||+|....++..+|+|.+.........+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            46788999999999999999999999999999998876666778999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC--CCCeeeeccc--------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA--NFNARLESSF--------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~--~~~~kl~d~~--------  496 (645)
                      ++|+|.+++.....   .+++.++..++.|++.||+|||+   .+|+||||||+|||++.  ++.+|+.|..        
T Consensus        84 ~g~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           84 SGLDIFERINTSAF---ELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCBHHHHHTSSSC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            99999999975432   38999999999999999999999   99999999999999997  7888998732        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    +...+.            .... 
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~------------~~~~-  220 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ----IIENIM------------NAEY-  220 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHH------------HTCC-
T ss_pred             CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH----HHHHHH------------cCCC-
Confidence               22458999999999998889999999999999999999999997643211    111110            0000 


Q ss_pred             CCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          574 GAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       574 ~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                       .++.    +....+.+++..||+.||.+|||+.|+++  .+.+.
T Consensus       221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence             1111    12456788999999999999999999998  45544

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-39  Score=337.88  Aligned_cols=265  Identities=21%  Similarity=0.238  Sum_probs=209.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--eEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--ELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~  423 (645)
                      ++|...++||+|+||+||+|....++..||||++...  ....+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            5688899999999999999999999999999998753  234567889999999999999999999988755  789999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----cCCCCeeeeccc---
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML----DANFNARLESSF---  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll----d~~~~~kl~d~~---  496 (645)
                      ||+++++|.+++..... ...+++.+++.++.|+++||+|||+   .+|+||||||+||||    +.++.+||.|..   
T Consensus        89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            99999999999986543 2238999999999999999999999   999999999999999    777788887722   


Q ss_pred             --------cccccCCcccCccccc--------CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQ--------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~--------~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                              ....||..|+|||++.        +..++.++|||||||++|||++|+.||............+..+.....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence                    2346899999999886        577899999999999999999999999764433333333322221111


Q ss_pred             cCchhHH---------hhh--hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          561 EGRIIEA---------ADK--RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       561 ~~~~~~~---------~d~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      .......         ..+  .............+.+++..||+.||++|||++|+++..++.+.+-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~  311 (319)
T 4euu_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG  311 (319)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred             cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence            0000000         000  1112456778889999999999999999999999999988765543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=5.6e-40  Score=360.55  Aligned_cols=248  Identities=24%  Similarity=0.389  Sum_probs=206.4

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|...+.||+|+||.||+|.+.. +..||||++.......++|.+|++++++++||||+++++++.+ +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            44678889999999999999999975 5679999998766667789999999999999999999999976 678999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      +++|+|.+++.....  ..+++.+++.++.|++.||+|||+   ++|+||||||+||||+.++.+||.|...        
T Consensus       260 ~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  334 (452)
T 1fmk_A          260 MSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  334 (452)
T ss_dssp             CTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             hcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence            999999999975421  238999999999999999999999   9999999999999999999999988321        


Q ss_pred             -----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          498 -----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       498 -----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...++..|+|||.+..+.++.++|||||||++|||++ |+.||......    .+.             +.+...
T Consensus       335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~-------------~~i~~~  397 (452)
T 1fmk_A          335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVL-------------DQVERG  397 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHH-------------HHHHTT
T ss_pred             eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHH-------------HHHHcC
Confidence                 1235678999999999999999999999999999999 99999764321    111             112222


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      .+...+..++..+.+++..||+.+|++|||++++++.|+.......
T Consensus       398 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence            2233445567788999999999999999999999999998765443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.3e-39  Score=333.11  Aligned_cols=244  Identities=25%  Similarity=0.431  Sum_probs=199.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch--------hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG--------KTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~--------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      .++|+..+.||+|+||.||+|.+..++..||+|++......        .+.+.+|++++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36788899999999999999999988999999988652211        167899999999999999999999997765 


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEcCCCC-----ee
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLDANFN-----AR  491 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld~~~~-----~k  491 (645)
                       ++||||+++|+|.+++.....   .+++..++.++.|++.||+|||+   .+  ++||||||+|||++.++.     +|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k  169 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK  169 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred             -eEEEEecCCCCHHHHHhcccC---CccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence             699999999999999876443   49999999999999999999998   78  999999999999988776     88


Q ss_pred             eeccc---------cccccCCcccCccccc--CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          492 LESSF---------TLTAGTMGYLAPEYLQ--YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       492 l~d~~---------~~~~gt~~y~APE~~~--~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      +.|..         ....||+.|+|||.+.  ...++.++|||||||++|||++|+.||........  ....       
T Consensus       170 l~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~-------  240 (287)
T 4f0f_A          170 VADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFIN-------  240 (287)
T ss_dssp             ECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHH-------
T ss_pred             eCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHH-------
Confidence            98732         2356899999999984  45678999999999999999999999976433211  1111       


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                           ...........+......+.+++..||+.||++|||++++++.|+++
T Consensus       241 -----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          241 -----MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             -----HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             -----HHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                 11122223334455567889999999999999999999999999863

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4e-40  Score=343.63  Aligned_cols=233  Identities=27%  Similarity=0.342  Sum_probs=189.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..++||+|+||+||+|.+..++..||||++....   .....+..|+..+.++ +|+||++++++|.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999999889999999876532   2344566666666665 8999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+ +++|.+++.....   .++|..++.++.|++.||+|||+   .+|+||||||+||||+.++.+||+|..       
T Consensus       137 e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             ECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             ecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            999 7899999876543   39999999999999999999999   899999999999999999999998832       


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||++|+|||++.+ .++.++|||||||++|||++|..|+.....           +.....+.....     
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~~~~~-----  272 (311)
T 3p1a_A          210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQGYLPPE-----  272 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTTCCCHH-----
T ss_pred             CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhccCCCcc-----
Confidence                22458999999998875 799999999999999999999877654211           011111111111     


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                         ++......+.+++..||+.||++|||++++++
T Consensus       273 ---~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          273 ---FTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence               11123456888999999999999999999986

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.1e-40  Score=338.03  Aligned_cols=246  Identities=26%  Similarity=0.383  Sum_probs=210.2

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|+..+.||+|+||.||+|.+..++..||+|.+.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            45778889999999999999999998899999999988777778899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      +++++|.+++.....  ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|...        
T Consensus        91 ~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           91 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             CTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             CCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            999999999976432  348999999999999999999999   8999999999999999999999987321        


Q ss_pred             -----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          498 -----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       498 -----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......    +             .+.+...
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~-------------~~~~~~~  228 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----V-------------YELLEKD  228 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----H-------------HHHHHTT
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----H-------------HHHHhcc
Confidence                 1245778999999999999999999999999999999 999997643221    1             1222222


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .....+...+..+.+++..|++.||.+|||++++++.|+...
T Consensus       229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            223334455677889999999999999999999999997543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=5.8e-40  Score=337.78  Aligned_cols=249  Identities=23%  Similarity=0.383  Sum_probs=197.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC-------eEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG-------SVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-------~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      ++|...+.||+|+||.||+|....++       ..||+|.+... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            56888899999999999999987655       57999998663 34567799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC--------ee
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--------AR  491 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~--------~k  491 (645)
                      ++||||+++|+|.+++.....   .+++..++.++.|+++||+|||+   .+|+||||||+|||++.++.        +|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             EEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceee
Confidence            999999999999999986543   38999999999999999999999   99999999999999999887        78


Q ss_pred             eecccc--------ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          492 LESSFT--------LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       492 l~d~~~--------~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                      +.|...        ...||..|+|||.+.+ ..++.++||||||+++|||++|..|+.......   .....        
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~~--------  230 (289)
T 4fvq_A          162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ---RKLQF--------  230 (289)
T ss_dssp             ECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHH--------
T ss_pred             eccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH---HHHHH--------
Confidence            877322        2357899999999987 678999999999999999999655544322111   11110        


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCC
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK  620 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~  620 (645)
                           ...  ....+......+.+++..||+.||++|||++++++.|+.+..+...+.
T Consensus       231 -----~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~  281 (289)
T 4fvq_A          231 -----YED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR  281 (289)
T ss_dssp             -----HHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred             -----hhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence                 000  011122224457889999999999999999999999998877655443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2e-39  Score=338.45  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=203.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~l  421 (645)
                      .++|+..+.||+|+||.||++....++..||||++.. .....+.+.+|++++++++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            3578889999999999999999988899999998765 34456789999999999999999999999873    347899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----  497 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----  497 (645)
                      ||||+++|+|.+++.........+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+++.|...    
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            999999999999998754444569999999999999999999999   8999999999999999999999987431    


Q ss_pred             -----------------ccccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh
Q 041096          498 -----------------LTAGTMGYLAPEYLQYGT---ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       498 -----------------~~~gt~~y~APE~~~~~~---~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                                       ...||+.|+|||.+....   ++.++||||||+++|||++|+.||........          
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----------  254 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD----------  254 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS----------
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc----------
Confidence                             124689999999987654   68999999999999999999999964221111          


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVP  619 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p  619 (645)
                           .....................+.+++..||+.||.+|||++++++.|+.+.+++..+
T Consensus       255 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~  311 (317)
T 2buj_A          255 -----SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ  311 (317)
T ss_dssp             -----CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred             -----hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence                 011111111111222334567889999999999999999999999999876555433

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.7e-39  Score=338.17  Aligned_cols=247  Identities=22%  Similarity=0.363  Sum_probs=204.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|...+.||+|+||.||+|...     .++..||||++...  ....+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            467888999999999999999873     44589999998763  33457789999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCC--------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 041096          420 LLVYEYMPNGSLDRMLYQDSE--------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKA  479 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp  479 (645)
                      ++||||+++++|.+++.....                    ....+++.+++.++.|+++||+|||+   .+|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence            999999999999999986543                    12348999999999999999999999   9999999999


Q ss_pred             CcEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccc
Q 041096          480 SNIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETE  544 (645)
Q Consensus       480 ~NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~  544 (645)
                      +|||++.++.+|+.|..              ....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999998732              12246778999999999899999999999999999999 9999976433


Q ss_pred             ccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          545 GHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       545 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ..    +.             +.+........+......+.+++..||+.||++||++.++++.|+.+.
T Consensus       259 ~~----~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          259 ER----LF-------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             GG----HH-------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HH----HH-------------HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            21    11             111122222334445667889999999999999999999999998653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.5e-40  Score=342.89  Aligned_cols=243  Identities=25%  Similarity=0.384  Sum_probs=197.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeE----EEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSV----AAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..++||+|+||.||+|.+..++..    ||+|.+...  ....+.+.+|+.++++++||||++++++|. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4688889999999999999998776654    778876542  334567889999999999999999999986 457899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++.....   .+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..     
T Consensus        92 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGG---GSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             EEEeCCCCCHHHHHHHccc---cCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccccc
Confidence            9999999999999976432   48999999999999999999999   999999999999999999999998732     


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....||..|+|||.+.++.++.++|||||||++|||++ |+.||.......    +.             +
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~-------------~  228 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE----VP-------------D  228 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH----HH-------------H
T ss_pred             CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH----HH-------------H
Confidence                     22346779999999999999999999999999999999 999997643221    11             1


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+........+......+.+++..||+.||.+||+++++++.|+....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          229 LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            111111222233344567889999999999999999999999987654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.3e-39  Score=339.95  Aligned_cols=240  Identities=24%  Similarity=0.300  Sum_probs=196.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..+.||+|+||.||+|....+++.||||++...  ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            36789999999999999999999989999999998653  2334678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++|+|.+++....    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..        
T Consensus        86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            999999999997543    38999999999999999999999   999999999999999999999998732        


Q ss_pred             ------cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||........  ....+...            
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~------------  224 (323)
T 3tki_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKEK------------  224 (323)
T ss_dssp             TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHHTT------------
T ss_pred             CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHhcc------------
Confidence                  23468999999999987765 7899999999999999999999976443211  11111100            


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                       .............+.+++..||+.||++|||++|+++.
T Consensus       225 -~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          225 -KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             -CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence             00001112234566788999999999999999999873

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.6e-39  Score=340.36  Aligned_cols=235  Identities=25%  Similarity=0.325  Sum_probs=199.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||+|....++..||+|++...    ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5788899999999999999999999999999998652    234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|..++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..       
T Consensus        85 E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           85 EYANGGELFFHLSRERV----FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999999976543    8999999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..    .+...+            ....
T Consensus       158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i------------~~~~  221 (337)
T 1o6l_A          158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELI------------LMEE  221 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHCC
T ss_pred             CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHHHH------------HcCC
Confidence                 2346899999999999999999999999999999999999999764321    111110            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                        ..++......+.+++..||+.||++||     +++++++
T Consensus       222 --~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             --CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence              123333456678889999999999999     8999976

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=4e-39  Score=343.39  Aligned_cols=242  Identities=21%  Similarity=0.233  Sum_probs=195.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||.||++....++..||||++.......+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            46789999999999999999999989999999999876666678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC--eeeeccc--------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--ARLESSF--------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~--~kl~d~~--------  496 (645)
                      ++|+|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+||||+.++.  +||.|..        
T Consensus        99 ~~~~L~~~l~~~~~----~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           99 SGGELYERICNAGR----FSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             CSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             CCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            99999999976543    8999999999999999999999   99999999999999988776  8887732        


Q ss_pred             ---cccccCCcccCcccccCCCCCcc-hhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEK-TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~k-sDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....||+.|+|||++.+..++.+ +|||||||++|||++|+.||................            .....
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~------------~~~~~  239 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI------------LSVKY  239 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHH------------HTTCC
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHH------------hcCCC
Confidence               23468999999999988887665 899999999999999999998654433222222111            11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...........+.+++..||+.||++|||++|+++
T Consensus       240 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            11111123456788999999999999999999987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.4e-39  Score=330.03  Aligned_cols=239  Identities=28%  Similarity=0.467  Sum_probs=193.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.+.  +..+|||++....     ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            57888999999999999999985  7899999886532     2346789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC---eeeCCCCCCcEEEcC--------CCCee
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ---VIHRDIKASNIMLDA--------NFNAR  491 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~---ivHrDlkp~NIlld~--------~~~~k  491 (645)
                      |||+++++|.+++...     .+++..++.++.|+++||+|||+   .+   ++||||||+|||++.        ++.++
T Consensus        85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceE
Confidence            9999999999999533     38999999999999999999999   66   999999999999986        66788


Q ss_pred             eeccc----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          492 LESSF----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       492 l~d~~----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                      +.|..          ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......    ..         
T Consensus       157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~---------  223 (271)
T 3dtc_A          157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----VA---------  223 (271)
T ss_dssp             ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH----HH---------
T ss_pred             EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH---------
Confidence            87732          22468999999999999999999999999999999999999997643211    00         


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                         ............+......+.+++..||+.+|.+|||++++++.|+.+
T Consensus       224 ---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          224 ---YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ---HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ---HhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence               011111222233444567788999999999999999999999999753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-39  Score=342.24  Aligned_cols=251  Identities=25%  Similarity=0.373  Sum_probs=203.6

Q ss_pred             HhcCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      ..++|...+.||+|+||.||+|.+     ...+..||+|++...  ....+.+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            456888999999999999999997     235678999998753  33457899999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCC-------------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCC
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSEN-------------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIK  478 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk  478 (645)
                      ..++||||+++|+|.+++......                   ...+++..++.++.|++.||+|||+   .+|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence            999999999999999999765321                   1248999999999999999999999   999999999


Q ss_pred             CCcEEEcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccc
Q 041096          479 ASNIMLDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERET  543 (645)
Q Consensus       479 p~NIlld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~  543 (645)
                      |+||||+.++.++|+|...              ...||+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999987321              2346778999999999999999999999999999998 999997654


Q ss_pred             cccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          544 EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       544 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      ....   +             ...+........+......+.+++..||+.||.+|||+.++++.|+.....
T Consensus       280 ~~~~---~-------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          280 VDAN---F-------------YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CSHH---H-------------HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             cHHH---H-------------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            3211   1             111222222233444567788999999999999999999999999876543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.1e-39  Score=341.97  Aligned_cols=238  Identities=22%  Similarity=0.313  Sum_probs=197.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC------cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS------HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      +.|+..+.||+|+||.||+|....++..||||++...      ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            5688899999999999999999999999999987531      2245679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC---eeeecc---
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESS---  495 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~---~kl~d~---  495 (645)
                      ||||+++++|.+++......+..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.   +|+.|.   
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            999999999998887654434458999999999999999999999   99999999999999987655   888772   


Q ss_pred             ---------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          496 ---------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       496 ---------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....     .+...+           
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~i-----------  244 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGI-----------  244 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----HHHHHH-----------
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----HHHHHH-----------
Confidence                     1234689999999999999999999999999999999999999976321     111111           


Q ss_pred             HhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .....  ..+.    .....+.+++..||+.||++|||+.++++
T Consensus       245 -~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          245 -IKGKY--KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             -HHTCC--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HcCCC--CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             00000  0111    12456788999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=3.7e-39  Score=333.60  Aligned_cols=246  Identities=24%  Similarity=0.372  Sum_probs=192.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhh--cCCCCeeeeeeeeeeC----CeEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC--LRHKNLVQLLGWCAEK----GELL  420 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~----~~~~  420 (645)
                      .++|+..+.||+|+||+||+|...  +..||||++...  ....+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEET--TEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEEC--CEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            467899999999999999999884  899999998653  34556667777666  7999999999987653    4689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH--------QECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      +||||+++|+|.+++...     .+++..++.++.|+++||+|||        +   ++|+||||||+||||+.++.+||
T Consensus        83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEE
T ss_pred             EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEE
Confidence            999999999999999543     3899999999999999999999        6   89999999999999999999999


Q ss_pred             ecccc----------------ccccCCcccCcccccCC------CCCcchhHHHHHHHHHHHHcC----------CCCCC
Q 041096          493 ESSFT----------------LTAGTMGYLAPEYLQYG------TATEKTDVFSYGVVVLEVACG----------RRPIE  540 (645)
Q Consensus       493 ~d~~~----------------~~~gt~~y~APE~~~~~------~~t~ksDV~SfGvvl~El~tG----------~~P~~  540 (645)
                      .|...                ...||+.|+|||.+.+.      .++.++|||||||++|||++|          +.||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            87321                12789999999999876      455799999999999999999          78886


Q ss_pred             ccccccchhhHHHHHHhhhccCchhHHhhhhcc-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          541 RETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN-GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       541 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...............  ......     .+.+. ...+......+.+++..||+.||++|||+.+|++.|++
T Consensus       235 ~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          235 DVVPNDPSFEDMRKV--VCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TTSCSSCCHHHHHHH--HTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCCCCcchhhhhHH--HhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            543322211111110  000000     01110 01233567889999999999999999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.8e-39  Score=339.66  Aligned_cols=236  Identities=23%  Similarity=0.287  Sum_probs=196.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|...+.||+|+||.||+|....++..||+|.+....       ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            356888999999999999999999999999999876532       1356799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeecc
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF----NARLESS  495 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d~  495 (645)
                      ++||||+++++|.+++....    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++    .+|+.|.
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  162 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF  162 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence            99999999999999997543    38999999999999999999999   9999999999999999887    7888772


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .           ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    ....+...      
T Consensus       163 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~~~~~------  232 (326)
T 2y0a_A          163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVSAV------  232 (326)
T ss_dssp             TTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHHT------
T ss_pred             CCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHHhc------
Confidence            2           23468999999999999999999999999999999999999997643211    11111000      


Q ss_pred             hHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                              ...++.    .....+.+++..||+.||++|||++++++
T Consensus       233 --------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          233 --------NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             --------CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --------CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    001111    12356778899999999999999999987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.7e-39  Score=334.95  Aligned_cols=246  Identities=27%  Similarity=0.451  Sum_probs=197.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|...  +..||+|.+... ...+.|.+|++++++++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            46788899999999999999986  788999998653 346789999999999999999999999874  4799999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-eeeeccc---------c
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-ARLESSF---------T  497 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-~kl~d~~---------~  497 (645)
                      +|+|.+++..... ...+++..++.++.|+++||+|||+...++|+||||||+|||++.++. +|+.|..         .
T Consensus        83 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~  161 (307)
T 2eva_A           83 GGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT  161 (307)
T ss_dssp             TCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc
Confidence            9999999976432 234789999999999999999999854468999999999999998886 6897732         2


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      ...||+.|+|||.+.+..++.++||||||+++|||++|+.||.......  ..+. +  ..          .........
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~-~--~~----------~~~~~~~~~  226 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIM-W--AV----------HNGTRPPLI  226 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HHHH-H--HH----------HTTCCCCCB
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HHHH-H--HH----------hcCCCCCcc
Confidence            3468999999999999999999999999999999999999997543211  1111 1  10          111111222


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       578 ~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ...+..+.+++..||+.||++|||++++++.|+.+.+
T Consensus       227 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            3345668889999999999999999999999986643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.9e-40  Score=361.76  Aligned_cols=255  Identities=22%  Similarity=0.256  Sum_probs=205.2

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      +.+++++..+++|+..++||+|+||+||+|+...++..||+|++...    ......+.+|+.++..++||||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            34566666778999999999999999999999999999999998652    22334589999999999999999999999


Q ss_pred             eeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       414 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                      .+.+..|||||||++|+|.+++.....   .+++..+..++.|++.||+|||+   .+|+||||||+||||+.++.+||.
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~---~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFED---RLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence            999999999999999999999976432   38999999999999999999999   999999999999999999999998


Q ss_pred             ccc-------------cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH
Q 041096          494 SSF-------------TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       494 d~~-------------~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~  555 (645)
                      |..             ...+||+.|+|||++.     .+.++.++|||||||++|||++|+.||...+..+....+..+.
T Consensus       218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~  297 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK  297 (437)
T ss_dssp             CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred             chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc
Confidence            832             1247999999999987     5678999999999999999999999998654322211111110


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH--HHcC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA--RPSMRRVFQ--ILNN  611 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~--~L~~  611 (645)
                      ..            ..+ ..........+.+++..|+..+|++  ||+++|+++  .+++
T Consensus       298 ~~------------~~~-p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          298 ER------------FQF-PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             HH------------CCC-CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             cc------------ccC-CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            00            000 0111123455677888888888888  999999987  3543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.9e-39  Score=327.46  Aligned_cols=242  Identities=25%  Similarity=0.396  Sum_probs=203.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||.||+|... ++..||+|++.......+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            56788899999999999999987 47889999998876667889999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +++|.+++.....   .+++..++.++.|+++||+|||+   .+++||||||+||+++.++.+++.|..           
T Consensus        87 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           87 HGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             TCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence            9999999976543   38999999999999999999999   999999999999999999999998732           


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......    .....             +.....
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~-------------i~~~~~  223 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED-------------ISTGFR  223 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH-------------HHTTCC
T ss_pred             ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH----HHHHH-------------HhcCCc
Confidence              12345678999999998999999999999999999999 89999764321    11111             111111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ...+......+.+++..||+.+|++||+++++++.|+++.
T Consensus       224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1223334567888999999999999999999999998654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.2e-39  Score=345.81  Aligned_cols=250  Identities=24%  Similarity=0.359  Sum_probs=205.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-------CCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-------SGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      .++|...+.||+|+||.||+|....       .+..||||++...  ....+.+.+|+++++++ +||||++++++|.+.
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            4678889999999999999999642       3468999998763  33457799999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +..++||||+++|+|.+++......            ...+++.+++.++.|+++||+|||+   .+|+||||||+||||
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence            9999999999999999999875421            2348999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++.+||+|..              ....+|..|+|||++.+..++.++|||||||++|||++ |+.||......    
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~----  300 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----  300 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence            999999998732              12246778999999999999999999999999999999 99999764321    


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      .+.             +.+........+......+.+++..||+.+|++|||+++|++.|+.+....
T Consensus       301 ~~~-------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          301 ELF-------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             HHH-------------HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             HHH-------------HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            111             112222222333445567889999999999999999999999998775443

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.6e-39  Score=332.39  Aligned_cols=252  Identities=14%  Similarity=0.138  Sum_probs=204.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..||||++... ...+.+.+|+.++.++ +|+|++++++++.+....++||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            35788999999999999999999888999999988653 2345688999999999 799999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-----eeeeccc----
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-----ARLESSF----  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-----~kl~d~~----  496 (645)
                      + +++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.     +|+.|..    
T Consensus        88 ~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           88 L-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             c-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            9 9999999986533   38999999999999999999998   99999999999999988776     8987721    


Q ss_pred             ---------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          497 ---------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       497 ---------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                     ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ....+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~  239 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-KYERIGEKKQS  239 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-HHHHHHHHHHH
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-HHHHHHhhccC
Confidence                           22358999999999999999999999999999999999999998754322211 11111000000


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ...     +.+    ....+..+.+++..||+.+|++||++++|++.|++.....
T Consensus       240 ~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          240 TPL-----REL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             SCH-----HHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccH-----HHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            000     011    1123467888999999999999999999999998775543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3e-39  Score=336.24  Aligned_cols=248  Identities=25%  Similarity=0.384  Sum_probs=205.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccCCc--chhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      .++|...+.||+|+||.||+|++     ..++..||+|++....  ...+.+.+|+.++.++ +||||+++++++.+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            46788899999999999999985     3467899999987643  3457799999999999 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCC--------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSEN--------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      .++||||+++|+|.+++......              ...+++.+++.++.|+++||+|||+   .+++||||||+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence            99999999999999999865421              2248999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++.+|+.|..              ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||......... 
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-  257 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-  257 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-
Confidence            999999998732              12345678999999999999999999999999999999 99999765432111 


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                                     .+.+........+......+.+++..||+.||.+|||++++++.|++..
T Consensus       258 ---------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          258 ---------------YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             ---------------HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------------HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence                           1112222222233345567889999999999999999999999998654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.6e-39  Score=343.54  Aligned_cols=236  Identities=23%  Similarity=0.299  Sum_probs=197.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .+.|...+.||+|+||.||+|....++..||+|.+.....       ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            4678899999999999999999999999999998865321       346789999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeecc
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF----NARLESS  495 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d~  495 (645)
                      ++||||+++|+|.+++....    .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++    .+|+.|.
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            99999999999999997543    38999999999999999999999   9999999999999998877    6888772


Q ss_pred             -----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 -----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 -----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......    +...+..       
T Consensus       164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~----~~~~i~~-------  232 (361)
T 2yab_A          164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANITA-------  232 (361)
T ss_dssp             SSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHT-------
T ss_pred             CCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHh-------
Confidence                       233469999999999999999999999999999999999999997643211    1111100       


Q ss_pred             hHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           .  ...++.    .....+.+++..||..||.+|||+.|+++
T Consensus       233 -----~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          233 -----V--SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             -----T--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -----c--CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                 0  001121    12356788899999999999999999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.9e-39  Score=338.40  Aligned_cols=257  Identities=23%  Similarity=0.330  Sum_probs=196.9

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCe---EEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGS---VAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~---~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~  418 (645)
                      ...++|+..+.||+|+||.||+|.+..++.   .||||++...   ....+.+.+|++++++++||||+++++++...+.
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345689999999999999999999876554   7999998763   3456789999999999999999999999987765


Q ss_pred             E------EEEEecCCCCCHhHHhhhcCC--CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          419 L------LLVYEYMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       419 ~------~lV~Ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      .      ++||||+++|+|.+++.....  ....+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCE
Confidence            4      999999999999999975432  22248999999999999999999999   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      |+.|...              ...+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......    +... 
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~-  251 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IYNY-  251 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH-
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HHHH-
Confidence            9987321              1235678999999999999999999999999999999 999997644321    1111 


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCCC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKL  621 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~~  621 (645)
                                  +........+......+.+++..||+.||++|||+.++++.|+++...+.....
T Consensus       252 ------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          252 ------------LIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             ------------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             ------------HhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence                        111111223344556788999999999999999999999999988776655443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=4.5e-39  Score=330.27  Aligned_cols=243  Identities=22%  Similarity=0.350  Sum_probs=197.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..+.||+|+||.||+|.+..   .+..||+|.....  ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            4678889999999999999999854   3567999988763  334567999999999999999999999985 457899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++++|.+++.....   .+++..++.++.|++.||+|||+   .+++||||||+|||++.++.+|+.|..     
T Consensus        93 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTT---TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEecCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccccc
Confidence            9999999999999976542   38999999999999999999999   999999999999999999999998732     


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                              ....+|+.|+|||.+....++.++||||||+++|||++ |+.||.......    ....             
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~----~~~~-------------  229 (281)
T 1mp8_A          167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIGR-------------  229 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH-------------
T ss_pred             CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH----HHHH-------------
Confidence                    12245678999999999999999999999999999997 999997644321    1111             


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      +........+...+..+.+++..||+.||++|||+.++++.|+.+.
T Consensus       230 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          230 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1111112233445677889999999999999999999999998653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=341.02  Aligned_cols=245  Identities=24%  Similarity=0.384  Sum_probs=202.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeE----EEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSV----AAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|+..++||+|+||.||+|.+..++..    +++|.+..  .....+.+.+|+.++++++||||++++++|.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            5788899999999999999998766654    57777654  3345678999999999999999999999998764 889


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----  497 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----  497 (645)
                      |+||+++|+|.+++.....   .+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||.|...    
T Consensus        94 v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            9999999999999987543   38999999999999999999999   9999999999999999999999987321    


Q ss_pred             ----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 ----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 ----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ...+|..|+|||.+.+..++.++|||||||++|||++ |+.||.......    +             .+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~-------------~~  230 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----I-------------SS  230 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----H-------------HH
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----H-------------HH
Confidence                      1235778999999999999999999999999999999 999997643321    1             12


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      .+........+......+.+++..||+.||.+||+++++++.|+.....+
T Consensus       231 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          231 ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            22222222334445567889999999999999999999999999876654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=7.4e-39  Score=344.61  Aligned_cols=261  Identities=20%  Similarity=0.284  Sum_probs=200.6

Q ss_pred             hcCCCcCceeccC--CceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRG--AFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G--~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..++||+|  +||.||+|....++..||||++...   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4678899999999  9999999999989999999998753   3345678889999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++.....  ..+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+|+.|..     
T Consensus       104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999976532  238999999999999999999999   999999999999999999999998731     


Q ss_pred             --------------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          497 --------------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                                    ....||+.|+|||++.+  ..++.++|||||||++|||++|+.||.....................
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence                          11368889999999987  67899999999999999999999999765432221111110000000


Q ss_pred             ------cC-------------chhHHhh---h------hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hc
Q 041096          561 ------EG-------------RIIEAAD---K------RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LN  610 (645)
Q Consensus       561 ------~~-------------~~~~~~d---~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~  610 (645)
                            ..             ...+.+.   +      .............+.+++..||+.||++|||++|+++.  ++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence                  00             0000000   0      00001222334568889999999999999999999863  55


Q ss_pred             CC
Q 041096          611 NE  612 (645)
Q Consensus       611 ~~  612 (645)
                      +.
T Consensus       339 ~~  340 (389)
T 3gni_B          339 QI  340 (389)
T ss_dssp             GC
T ss_pred             HH
Confidence            44

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=7.3e-39  Score=340.64  Aligned_cols=204  Identities=22%  Similarity=0.258  Sum_probs=181.4

Q ss_pred             CCcccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-----CCCeee
Q 041096          334 GPREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-----HKNLVQ  408 (645)
Q Consensus       334 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-----H~niv~  408 (645)
                      ....+++++-....++|...++||+|+||.||+|....++..||||++.......+.+..|++++.+++     ||||++
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            344566666666778999999999999999999999888999999999876666778889999999997     999999


Q ss_pred             eeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC--
Q 041096          409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA--  486 (645)
Q Consensus       409 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~--  486 (645)
                      +++++...+..++||||+ +++|.+++.....  ..+++.++..++.||+.||+|||+   .+|+||||||+||||+.  
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~  174 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPY  174 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTT
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEcccc
Confidence            999999999999999999 9999999986543  238999999999999999999999   99999999999999975  


Q ss_pred             -----------------------CCCeeeeccc---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc
Q 041096          487 -----------------------NFNARLESSF---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC  534 (645)
Q Consensus       487 -----------------------~~~~kl~d~~---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t  534 (645)
                                             ++.+||+|..         ....||+.|+|||++.+..++.++|||||||++|||++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  254 (360)
T 3llt_A          175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT  254 (360)
T ss_dssp             CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             ccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence                                   7788887732         33468999999999999999999999999999999999


Q ss_pred             CCCCCCccc
Q 041096          535 GRRPIERET  543 (645)
Q Consensus       535 G~~P~~~~~  543 (645)
                      |+.||....
T Consensus       255 g~~pf~~~~  263 (360)
T 3llt_A          255 GSLLFRTHE  263 (360)
T ss_dssp             SSCSCCCSS
T ss_pred             CCCCCCCCc
Confidence            999997654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=8.6e-39  Score=330.07  Aligned_cols=250  Identities=20%  Similarity=0.260  Sum_probs=194.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||+||+|....++..||+|++...   ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5788899999999999999999999999999998753   2334678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++ +|.+++.....   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..        
T Consensus        82 ~~~~-~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSE-EHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred             cCCC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence            9965 66666654332   39999999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc---Cch---h
Q 041096          497 ----TLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE---GRI---I  565 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~---~~~---~  565 (645)
                          ....||+.|+|||++.+.. ++.++|||||||++|||++|+.|+.......   .....+......   ...   .
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH---HHHHHHHHHHCCCCTTTCTTGG
T ss_pred             cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHHhCCCChhhhhhhc
Confidence                2346799999999998765 7999999999999999999988865432211   111211111110   000   0


Q ss_pred             HHhhh---------hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADK---------RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +..+.         .............+.+++..|++.||++|||++|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            00000         0000111234456788999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.6e-39  Score=341.91  Aligned_cols=251  Identities=25%  Similarity=0.381  Sum_probs=204.6

Q ss_pred             HHHHhcCCCcCceeccCCceEEEEEEECCCC-----eEEEEEeccCCc--chhHhHHHHHHHHhhc-CCCCeeeeeeeee
Q 041096          343 LRSATRGFHSNRILGRGAFGNVYKAYFASSG-----SVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKNLVQLLGWCA  414 (645)
Q Consensus       343 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~-----~~vavK~~~~~~--~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~  414 (645)
                      +....++|...+.||+|+||.||+|.....+     ..||+|.+....  ...+.+.+|+.+++++ +||||++++++|.
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            3344578999999999999999999986544     379999987633  3456799999999999 8999999999999


Q ss_pred             eCCeEEEEEecCCCCCHhHHhhhcCC----------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          415 EKGELLLVYEYMPNGSLDRMLYQDSE----------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       415 ~~~~~~lV~Ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +.+..++||||+++|+|.+++.....          ....+++..++.++.|++.||+|||+   .+|+||||||+|||+
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLL  197 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEE
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEE
Confidence            99999999999999999999975421          12348999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++.+||.|..              ....||+.|+|||.+.+..++.++|||||||++|||++ |..||......... 
T Consensus       198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~-  276 (333)
T 2i1m_A          198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF-  276 (333)
T ss_dssp             EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH-
T ss_pred             CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH-
Confidence            999999998732              12345778999999999999999999999999999998 99999764332211 


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                                     .+.+........+...+..+.+++..||+.||.+|||+.++++.|+..
T Consensus       277 ---------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          277 ---------------YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             ---------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence                           111122222222333456788899999999999999999999999754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.5e-39  Score=338.58  Aligned_cols=259  Identities=24%  Similarity=0.355  Sum_probs=210.2

Q ss_pred             ccCHHHHHHHhcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeee
Q 041096          337 EFSYRELRSATRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQL  409 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l  409 (645)
                      .+..+++....++|...+.||+|+||.||+|...     .++..||+|.+....  .....+.+|++++++++||||+++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            3444555666788999999999999999999876     346789999987633  345578999999999999999999


Q ss_pred             eeeeeeCCeEEEEEecCCCCCHhHHhhhcCC------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSE------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       410 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                      ++++.+.+..++||||+++|+|.+++.....      ....+++..++.++.|++.||+|||+   .+|+||||||+|||
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIl  170 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM  170 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEE
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEE
Confidence            9999999999999999999999999975321      11347999999999999999999999   99999999999999


Q ss_pred             EcCCCCeeeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccch
Q 041096          484 LDANFNARLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKM  548 (645)
Q Consensus       484 ld~~~~~kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~  548 (645)
                      ++.++.+|+.|...              ...||+.|+|||.+.+..++.++||||||+++|||++ |+.||......   
T Consensus       171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---  247 (322)
T 1p4o_A          171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---  247 (322)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---
T ss_pred             EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---
Confidence            99999999987321              1245788999999999999999999999999999999 88998764321   


Q ss_pred             hhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          549 VNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       549 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                       .+...+             ........+......+.+++..||+.+|.+|||+.++++.|++...+
T Consensus       248 -~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          248 -QVLRFV-------------MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             -HHHHHH-------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             -HHHHHH-------------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence             111111             11111122334556788899999999999999999999999987663

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=6.4e-39  Score=337.19  Aligned_cols=247  Identities=15%  Similarity=0.144  Sum_probs=200.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.... ..+.+.+|+++++++ +|+||+++++++...+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            367889999999999999999998889999999886532 345689999999999 999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC-----eeeeccc----
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN-----ARLESSF----  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~-----~kl~d~~----  496 (645)
                      + +++|.+++.....   .+++..++.++.|++.||+|||+   .+|+||||||+||||+.++.     +||.|..    
T Consensus        87 ~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           87 L-GPSLEDLFDLCDR---TFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             C-CCCHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            9 9999999986432   39999999999999999999999   99999999999999998887     8998721    


Q ss_pred             ---------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          497 ---------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       497 ---------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                     ....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+......
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~  238 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-ERYQKIGDTKRA  238 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-HHHHHHHHHHHH
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-HHHHHHHhhhcc
Confidence                           2346899999999999999999999999999999999999999875432211 111111000000


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                           ...+.+.    ...+ .+.+++..||+.+|.+||++++|.+.|++.
T Consensus       239 -----~~~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          239 -----TPIEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             -----SCHHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             -----CCHHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence                 0000010    1123 788899999999999999999999988754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.4e-39  Score=331.46  Aligned_cols=247  Identities=21%  Similarity=0.296  Sum_probs=202.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeee--eCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCA--EKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~--~~~~~~l  421 (645)
                      .++|+..+.||+|+||.||++....++..||+|.+...   ....+.+.+|++++++++||||+++++++.  ..+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            46788899999999999999999988999999998653   334567999999999999999999999875  4678999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ-----VIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      ||||+++++|.+++.........+++..++.++.|++.||+|||+   .+     ++||||||+|||++.++.+|+.|..
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            999999999999998755444559999999999999999999999   67     9999999999999999999998732


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ....||..|+|||.+.+..++.++||||||+++|||++|+.||......    .+..           
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-----------  226 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAG-----------  226 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH-----------
T ss_pred             hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHH-----------
Confidence                        1235899999999999999999999999999999999999999764321    1111           


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                        .+........+......+.+++..||+.||++||+++++++.+....
T Consensus       227 --~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          227 --KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             --HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             --HHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence              11111111233344567888999999999999999999998775443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.9e-38  Score=331.82  Aligned_cols=253  Identities=19%  Similarity=0.291  Sum_probs=186.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..+.||+|+||.||+|....++..||+|++...  ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46788899999999999999999988999999988653  2345678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCC--CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          425 YMPNGSLDRMLYQDSE--NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |++ |+|.+++.....  ....+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..      
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            997 699999876432  12348999999999999999999999   999999999999999999999998732      


Q ss_pred             ------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----hc-----
Q 041096          497 ------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----YA-----  560 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~~-----  560 (645)
                            ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.+.....    +.     
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence                  23468999999999976 468999999999999999999999998654322221121111000    00     


Q ss_pred             -----------cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 -----------EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 -----------~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                 ...+.+.+.+.....    ....+.+++..||+.||++|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEP----LDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSC----CCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcccccccccchhHHHhhccccccc----CCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                       001111122211112    2346888999999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.8e-38  Score=336.79  Aligned_cols=235  Identities=22%  Similarity=0.242  Sum_probs=199.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..||+|++...    ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5788899999999999999999989999999998652    233567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++.++..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..       
T Consensus       121 e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             ECCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccC
Confidence            99999999999986543    8999999999999999999999   999999999999999999999998732       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.......    +...            +....  .
T Consensus       194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~------------i~~~~--~  255 (350)
T 1rdq_E          194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ----IYEK------------IVSGK--V  255 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH------------HHHCC--C
T ss_pred             CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH----HHHH------------HHcCC--C
Confidence              23479999999999999999999999999999999999999997643211    1110            11111  1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .++......+.+++..||+.||.+||+     ++++++
T Consensus       256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            233344566888999999999999998     888875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.4e-39  Score=339.87  Aligned_cols=251  Identities=23%  Similarity=0.341  Sum_probs=201.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|...+.||+|+||.||+|.+     ..++..||||.+..  .......+.+|+.++++++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46788899999999999999984     45677899999865  334566799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCC---CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeee
Q 041096          420 LLVYEYMPNGSLDRMLYQDSEN---GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLE  493 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~  493 (645)
                      ++||||+++++|.+++......   ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++.   +..++++
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence            9999999999999999875421   2348999999999999999999999   99999999999999994   4458887


Q ss_pred             ccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhh
Q 041096          494 SSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       494 d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      |..              ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||......    .+...    
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~----  257 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF----  257 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH----
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHH----
Confidence            721              22356889999999999999999999999999999998 99999754321    11111    


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                               +........+......+.+++..||+.||.+||++.++++.|+.....+.
T Consensus       258 ---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          258 ---------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             ---------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             ---------HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence                     11111122333445678899999999999999999999999987655543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.3e-39  Score=349.23  Aligned_cols=246  Identities=24%  Similarity=0.296  Sum_probs=201.5

Q ss_pred             HHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          340 YRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       340 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      +++++...++|+..++||+|+||+||+|....++..||+|++...    ....+.+.+|+.+++.++||||++++++|.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            345556678999999999999999999999999999999998652    2334568899999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      .+..||||||+++|+|.+++....     +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|.
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~-----~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DF  212 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF  212 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecc
Confidence            999999999999999999997542     8999999999999999999999   99999999999999999999999873


Q ss_pred             c-------------cccccCCcccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 F-------------TLTAGTMGYLAPEYLQYGT----ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ~-------------~~~~gt~~y~APE~~~~~~----~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .             ...+||+.|+|||++....    ++.++|||||||++|||++|+.||...+.......+..+.   
T Consensus       213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~---  289 (410)
T 3v8s_A          213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK---  289 (410)
T ss_dssp             TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH---
T ss_pred             ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc---
Confidence            1             2356999999999998765    7899999999999999999999997643322111111110   


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSA--RPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~~vl~  607 (645)
                                 ..+.-.........+.+++..|++.+|.+  ||+++||++
T Consensus       290 -----------~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          290 -----------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             -----------HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             -----------ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence                       00111111123456778889999999988  999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.6e-39  Score=331.46  Aligned_cols=237  Identities=22%  Similarity=0.283  Sum_probs=189.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------------------------hhHhHHHHHHHHh
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------------------------GKTEFLAELSIIA  399 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~Ei~~l~  399 (645)
                      .++|...+.||+|+||.||+|....++..||||++.....                           ..+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3678899999999999999999999999999998865321                           2356899999999


Q ss_pred             hcCCCCeeeeeeeeee--CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCC
Q 041096          400 CLRHKNLVQLLGWCAE--KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDI  477 (645)
Q Consensus       400 ~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl  477 (645)
                      +++||||+++++++.+  .+..++||||+++++|.+++..     ..+++.++..++.|+++||+|||+   .+|+||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dl  163 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDI  163 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCC
Confidence            9999999999999986  5689999999999999886543     238999999999999999999999   99999999


Q ss_pred             CCCcEEEcCCCCeeeeccc------------cccccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          478 KASNIMLDANFNARLESSF------------TLTAGTMGYLAPEYLQYGT---ATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       478 kp~NIlld~~~~~kl~d~~------------~~~~gt~~y~APE~~~~~~---~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                      ||+|||++.++.+||.|..            ....||+.|+|||.+.+..   ++.++|||||||++|||++|+.||...
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            9999999999999998732            2346899999999998765   378999999999999999999999753


Q ss_pred             ccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          543 TEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       543 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...    .+...+            ....+...........+.+++..||+.||++|||+.|+++
T Consensus       244 ~~~----~~~~~~------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          244 RIM----CLHSKI------------KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SHH----HHHHHH------------HHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cHH----HHHHHH------------hcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            211    111110            0011111111223456888999999999999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9e-39  Score=336.74  Aligned_cols=245  Identities=25%  Similarity=0.457  Sum_probs=200.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC----CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS----GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ++|...+.||+|+||.||+|....+    +..||||.+...  ......+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            4566778999999999999988654    346999998763  3345679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT----  497 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~----  497 (645)
                      ||||+++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+|+.|...    
T Consensus       124 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            9999999999999976533   38999999999999999999999   9999999999999999999999987321    


Q ss_pred             -----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          498 -----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       498 -----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                 ...+|..|+|||.+.+..++.++|||||||++|||++ |+.||......    .+.             
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~-------------  260 (333)
T 1mqb_A          198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVM-------------  260 (333)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHH-------------
T ss_pred             ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHH-------------
Confidence                       1234678999999999999999999999999999999 99999754321    111             


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      +.+........+......+.+++..||+.+|++||++.++++.|+.....
T Consensus       261 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             HHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            11111112223344566788999999999999999999999999866443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-38  Score=332.34  Aligned_cols=235  Identities=22%  Similarity=0.296  Sum_probs=198.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||++....++..||+|++...    ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5788899999999999999999989999999998652    233566889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..       
T Consensus        86 e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQR----FPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             CCCCSCBHHHHHHHTSS----CCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             eCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            99999999999986543    8999999999999999999998   999999999999999999999998732       


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.......    ...            .++...+  
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~------------~i~~~~~--  220 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----TYE------------KILNAEL--  220 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH------------HHHHCCC--
T ss_pred             ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----HHH------------HHHhCCC--
Confidence              23579999999999999999999999999999999999999997643211    111            1111111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      .++......+.+++..|++.||++||     +++++++
T Consensus       221 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            22333445678888999999999999     8999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.2e-38  Score=328.38  Aligned_cols=251  Identities=21%  Similarity=0.312  Sum_probs=193.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|.. .++..+|+|++.....   ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            4688899999999999999998 4688999998865332   24678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++ +|.+++.....   .+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+|+.|..        
T Consensus        81 ~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             CCSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ecCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            9974 99999876433   38999999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc---hh--H
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---II--E  566 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~---~~--~  566 (645)
                          ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+...... .....   ..  .
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  232 (288)
T 1ob3_A          154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT-PNSKNWPNVTELP  232 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCTTTSTTGGGST
T ss_pred             ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCC-CChhhchhhhccc
Confidence                22368999999999976 45899999999999999999999999765432221111111000 00000   00  0


Q ss_pred             Hhhhhcc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLN-------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..++...       ..........+.+++..||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0011100       0111223456788999999999999999999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=4.6e-39  Score=360.49  Aligned_cols=247  Identities=24%  Similarity=0.393  Sum_probs=206.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|+..++||+|+||.||+|.+.. +..||||+++......++|.+|+++|++++|+||++++++|.+ +..+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            44678888999999999999999975 5779999998766667789999999999999999999999976 678999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--------  497 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--------  497 (645)
                      +++|+|.++|.....  ..+++.+++.|+.||++||+|||+   ++|+||||||+||||+.++.+||.|...        
T Consensus       343 ~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  417 (535)
T 2h8h_A          343 MSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  417 (535)
T ss_dssp             CTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred             hcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence            999999999975421  238999999999999999999999   9999999999999999999999988321        


Q ss_pred             -----ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          498 -----LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       498 -----~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...++..|+|||++....++.++|||||||+||||++ |+.||......    .+.             +.+...
T Consensus       418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~-------------~~i~~~  480 (535)
T 2h8h_A          418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVL-------------DQVERG  480 (535)
T ss_dssp             HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHH-------------HHHHTT
T ss_pred             eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHH-------------HHHHcC
Confidence                 2235678999999999999999999999999999999 99999764321    111             112222


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      .+...+..+...+.+++..||+.||++|||+++|++.|+......
T Consensus       481 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          481 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            222334456678889999999999999999999999999876543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-38  Score=332.54  Aligned_cols=256  Identities=23%  Similarity=0.352  Sum_probs=198.0

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhh--cCCCCeeeeeeeeeeC---
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC--LRHKNLVQLLGWCAEK---  416 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~---  416 (645)
                      .-....++|+..+.||+|+||.||+|...  +..||||++.....  ..+..|.+++..  ++||||+++++++...   
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            33445578999999999999999999986  89999999865433  344455555544  4899999999999887   


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCCCcEEEcCCCCe
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NIlld~~~~~  490 (645)
                       ...++||||+++|+|.+++....     +++..++.++.|++.||+|||+.+     .++|+||||||+|||++.++.+
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  181 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC  181 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred             CCceEEEEeccCCCcHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence             78999999999999999996542     899999999999999999999810     1299999999999999999999


Q ss_pred             eeecccc----------------ccccCCcccCcccccCCCCCcc------hhHHHHHHHHHHHHcC----------CCC
Q 041096          491 RLESSFT----------------LTAGTMGYLAPEYLQYGTATEK------TDVFSYGVVVLEVACG----------RRP  538 (645)
Q Consensus       491 kl~d~~~----------------~~~gt~~y~APE~~~~~~~t~k------sDV~SfGvvl~El~tG----------~~P  538 (645)
                      ||.|...                ...||+.|+|||.+.+...+.+      +|||||||++|||++|          +.|
T Consensus       182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p  261 (337)
T 3mdy_A          182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP  261 (337)
T ss_dssp             EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence            9988321                2368999999999988776655      9999999999999999          566


Q ss_pred             CCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          539 IERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       539 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      |................           .....+....+     .++...+.+++..||+.||++|||+.+|++.|+.+.
T Consensus       262 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          262 YHDLVPSDPSYEDMREI-----------VCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             TTTTSCSSCCHHHHHHH-----------HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCCchhhhHHH-----------HhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            65432222111111100           00111122222     267788999999999999999999999999998776


Q ss_pred             CCCC
Q 041096          614 EPLV  617 (645)
Q Consensus       614 ~~~~  617 (645)
                      +...
T Consensus       331 ~~~~  334 (337)
T 3mdy_A          331 ESQD  334 (337)
T ss_dssp             HTTT
T ss_pred             hhcc
Confidence            5543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.2e-39  Score=340.11  Aligned_cols=261  Identities=22%  Similarity=0.311  Sum_probs=206.3

Q ss_pred             cCCCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeee--eCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCA--EKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~--~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|.+    ..++..||||++... ....+.+.+|++++++++|+||+++++++.  +.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5788889999999999999994    567899999998764 344567999999999999999999999886  456799


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+++++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..    
T Consensus       103 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             EEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccccee
Confidence            99999999999999976433   38999999999999999999999   999999999999999999999998722    


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                 ....||..|+|||.+.+..++.++||||||+++|||++|+.||........  ....+.........+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~  254 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCERDVPALSRLL  254 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC----CCHHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccccccccHHHHH
Confidence                       123467779999999998999999999999999999999999875322100  0000000000011223


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      +.+........+......+.+++..||+.||++|||++++++.|+......
T Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            333444444455566778899999999999999999999999999775544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=8.8e-39  Score=339.18  Aligned_cols=241  Identities=22%  Similarity=0.285  Sum_probs=190.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|+..+.||+|+||.||+|....++..||||++.... ..+.+.+|++++.+++||||++++++|.+.+..++||||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            3567899999999999999999999889999999987643 346788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~~------  496 (645)
                      +++|+|.+++....    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||.|..      
T Consensus       130 ~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          130 VTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            99999999997643    38999999999999999999999   99999999999999975   8889998732      


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   .+...+.    ...      ..
T Consensus       203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~i~----~~~------~~  269 (349)
T 2w4o_A          203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFRRIL----NCE------YY  269 (349)
T ss_dssp             ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHHHHH----TTC------CC
T ss_pred             cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHHHHH----hCC------Cc
Confidence                 23468999999999999999999999999999999999999997543211   1111110    000      00


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .......+....+.+++..||+.||++|||+.++++
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            001111234556788999999999999999999987

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=9.6e-39  Score=334.77  Aligned_cols=235  Identities=20%  Similarity=0.303  Sum_probs=191.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC-------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG-------  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-------  417 (645)
                      .++|+..+.||+|+||.||+|+...++..||||++..  .....+.+.+|++++++++||||++++++|.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            4578889999999999999999998899999999875  3345678999999999999999999999986543       


Q ss_pred             --------------------------------------------------eEEEEEecCCCCCHhHHhhhcCCCCccCCH
Q 041096          418 --------------------------------------------------ELLLVYEYMPNGSLDRMLYQDSENGVLLSW  447 (645)
Q Consensus       418 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~  447 (645)
                                                                        ..++||||+++++|.+++..... ....++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~  163 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH  163 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence                                                              38999999999999999986543 334678


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc------------------------ccccCC
Q 041096          448 YHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT------------------------LTAGTM  503 (645)
Q Consensus       448 ~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~------------------------~~~gt~  503 (645)
                      ..++.++.|++.||+|||+   .+|+||||||+||||+.++.+||+|...                        ...||+
T Consensus       164 ~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            8899999999999999999   9999999999999999999999987321                        135899


Q ss_pred             cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC---HHH
Q 041096          504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN---EDE  580 (645)
Q Consensus       504 ~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~---~~~  580 (645)
                      .|+|||.+.+..++.++|||||||++|||++|..|+....      .....                ......+   ...
T Consensus       241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~~----------------~~~~~~~~~~~~~  298 (332)
T 3qd2_B          241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIITD----------------VRNLKFPLLFTQK  298 (332)
T ss_dssp             GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHHH----------------HHTTCCCHHHHHH
T ss_pred             CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHHH----------------hhccCCCcccccC
Confidence            9999999999999999999999999999999877643210      11100                0011111   233


Q ss_pred             HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          581 MKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       581 ~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+.+++..||+.||++|||++|+++
T Consensus       299 ~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          299 YPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            456688999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=7.2e-39  Score=341.62  Aligned_cols=258  Identities=18%  Similarity=0.218  Sum_probs=201.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCC-----CeEEEEEeccCCcch------------hHhHHHHHHHHhhcCCCCeee
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASS-----GSVAAVKRSKHSHEG------------KTEFLAELSIIACLRHKNLVQ  408 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~~~~~~~~------------~~~~~~Ei~~l~~l~H~niv~  408 (645)
                      ..++|...+.||+|+||.||+|.+..+     +..||||++......            ...+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            356899999999999999999998764     478999987654311            123445666777888999999


Q ss_pred             eeeeeeeC----CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          409 LLGWCAEK----GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       409 l~g~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +++++...    ...+|||||+ +++|.+++.....   .+++.+++.++.||+.||+|||+   .+|+||||||+||||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill  185 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK---RFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLL  185 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEE
Confidence            99998765    4589999999 9999999986533   39999999999999999999999   999999999999999


Q ss_pred             c--CCCCeeeecccc-------------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 041096          485 D--ANFNARLESSFT-------------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERET  543 (645)
Q Consensus       485 d--~~~~~kl~d~~~-------------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~  543 (645)
                      +  .++.+||.|...                   ...||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            9  889999987321                   1239999999999999999999999999999999999999998643


Q ss_pred             cccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          544 EGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       544 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      ....   ......... ...+.+.+++.+..   ...+..+.+++..||+.+|.+||++++|++.|++......
T Consensus       266 ~~~~---~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          266 KDPK---YVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             TCHH---HHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cCHH---HHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            3221   111111111 11344445544421   2234667888899999999999999999999987655443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=7.8e-39  Score=341.28  Aligned_cols=241  Identities=20%  Similarity=0.273  Sum_probs=197.3

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ..++|...+.||+|+||.||+|....++..||+|++...   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            346799999999999999999999999999999998653   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeeccc---
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLESSF---  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d~~---  496 (645)
                      |||+++|+|.+++....    .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++   .+||.|..   
T Consensus       107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            99999999999997543    38999999999999999999999   9999999999999998654   48887722   


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .+...+..    +..    
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~i~~----~~~----  247 (362)
T 2bdw_A          180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQIKA----GAY----  247 (362)
T ss_dssp             CCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH----TCC----
T ss_pred             EecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHh----CCC----
Confidence                    2347899999999999999999999999999999999999999764321    11111100    000    


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        .............+.+++..||+.||++|||+.++++
T Consensus       248 --~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          248 --DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             --CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              0000000123456788999999999999999999976

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.4e-39  Score=335.30  Aligned_cols=254  Identities=21%  Similarity=0.312  Sum_probs=201.3

Q ss_pred             cCCCcCceeccCCceEEEEEE----ECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAY----FASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~----~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~  419 (645)
                      +.|+..+.||+|+||.||+|.    ...++..||+|++...  ....+.+.+|++++++++||||+++++++.+.  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            457888999999999999999    4567899999998753  33457899999999999999999999999876  678


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+++.|..   
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTK  174 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccc
Confidence            999999999999999966543   38999999999999999999999   999999999999999999999998722   


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh---cc
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY---AE  561 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~---~~  561 (645)
                                  ....||..|+|||.+.+..++.++||||||+++|||++|+.|+.....     ..........   ..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~  249 (302)
T 4e5w_A          175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA-----LFLKMIGPTHGQMTV  249 (302)
T ss_dssp             ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----HHHHHHCSCCGGGHH
T ss_pred             cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh-----HHhhccCCcccccCH
Confidence                        123467789999999999999999999999999999999998653210     0000000000   00


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ..+...+........+......+.+++..||+.||.+|||++++++.|+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            112222233333344555667889999999999999999999999999754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.6e-38  Score=342.06  Aligned_cols=244  Identities=23%  Similarity=0.311  Sum_probs=197.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..++||+|+||+||+|+...++..+|+|++++.    ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            35788999999999999999999999999999998752    23345688999999887 89999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|..++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..     
T Consensus       131 V~E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEcCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999999986543    8999999999999999999999   999999999999999999999998732     


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccch-hhHHHHHHhhhccCchhHHh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM-VNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+....        .+.
T Consensus       204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~--------~i~  275 (396)
T 4dc2_A          204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------VIL  275 (396)
T ss_dssp             CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH--------HHH
T ss_pred             ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH--------HHh
Confidence                   2346899999999999999999999999999999999999999753221110 000011100        011


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM------RRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~~vl~  607 (645)
                      ...  ..++......+.+++..||+.||++||++      +|+++
T Consensus       276 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          276 EKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             HCC--CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             ccc--cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence            111  12344455677889999999999999995      56655

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=8.5e-39  Score=333.68  Aligned_cols=253  Identities=20%  Similarity=0.259  Sum_probs=195.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||+||+|.... +..||+|++....   ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            4678899999999999999999864 8899999987532   23467899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||++ ++|.+++.....   .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..       
T Consensus        99 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           99 EFME-KDLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             ECCS-EEHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             cCCC-CCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            9997 588888876443   38999999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc-----Cchh
Q 041096          497 -----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE-----GRII  565 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~-----~~~~  565 (645)
                           ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+..........     ..+.
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  251 (311)
T 3niz_A          172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP  251 (311)
T ss_dssp             CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred             CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence                 22367999999999876 568999999999999999999999998765443332222211100000     0000


Q ss_pred             HHhhhhcc--CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLN--GAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~--~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+....  ...     .......+.+++..||+.||++|||++|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00000000  000     0112346788999999999999999999987

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3.5e-39  Score=342.63  Aligned_cols=236  Identities=25%  Similarity=0.343  Sum_probs=197.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..++||+|+||+||+|+...++..||||++...    ....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            47899999999999999999999999999999998752    23445688999999988 69999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|..++.....    +++.++..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..     
T Consensus       102 v~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999999987543    8999999999999999999999   999999999999999999999998832     


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    +...            +..
T Consensus       175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~------------i~~  238 (353)
T 3txo_A          175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----LFEA------------ILN  238 (353)
T ss_dssp             CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH------------HHH
T ss_pred             ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----HHHH------------HHc
Confidence                   22468999999999998899999999999999999999999997643221    1111            111


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM------RRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~~vl~  607 (645)
                      ..  ..++......+.+++..|++.||++||++      +++++
T Consensus       239 ~~--~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          239 DE--VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CC--CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            11  12333345567888999999999999998      77765

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.5e-38  Score=325.94  Aligned_cols=241  Identities=29%  Similarity=0.421  Sum_probs=201.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|++...    ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46788899999999999999999999999999988652    22345788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+++.|..      
T Consensus        88 ~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            999999999999976543    8999999999999999999998   999999999999999999999998832      


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......    .....              ...
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~--------------~~~  222 (279)
T 3fdn_A          161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE----TYKRI--------------SRV  222 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHH--------------HHT
T ss_pred             cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH----HHHHH--------------HhC
Confidence                23468999999999999999999999999999999999999997543211    11100              001


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ....+......+.+++..||+.||.+|||++|+++  .+...
T Consensus       223 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          223 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence            11233334566788999999999999999999997  44443

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.2e-39  Score=338.32  Aligned_cols=240  Identities=20%  Similarity=0.301  Sum_probs=199.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|...+.||+|+||.||+|.+..++..||+|++...    ......+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36788999999999999999999889999999988642    22345789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+ +|+|.+++.....    +++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|..      
T Consensus        88 ~E~~-~g~l~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             ECCC-CEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             EECC-CCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            9999 7899999876543    8999999999999999999999   899999999999999999999998732      


Q ss_pred             -----cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ...+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...........                 +..
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~-----------------i~~  222 (336)
T 3h4j_B          160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK-----------------VNS  222 (336)
T ss_dssp             TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC-----------------CCS
T ss_pred             CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH-----------------HHc
Confidence                 23468999999999988776 7899999999999999999999976432211110                 000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      . ....+......+.+++..||+.||.+|||++|+++  .+...
T Consensus       223 ~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          223 C-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             S-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             C-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            0 01123334456788999999999999999999987  45543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=7.7e-39  Score=333.17  Aligned_cols=253  Identities=24%  Similarity=0.363  Sum_probs=201.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++..    .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            568889999999999999999988899999998875    2334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.........+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|..       
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            9999999999997644334458999999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....|+..|+|||.+.+..++.++||||||+++|||++|+.||......  ...+...+.            ...
T Consensus       189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~------------~~~  254 (310)
T 2wqm_A          189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIE------------QCD  254 (310)
T ss_dssp             ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC--HHHHHHHHH------------TTC
T ss_pred             CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh--HHHHHHHhh------------ccc
Confidence                 1235889999999999999999999999999999999999999753221  111111110            000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      ............+.+++..||+.||.+|||+++|++.|+.+.....
T Consensus       255 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            1111112345578889999999999999999999999987654443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.3e-38  Score=335.44  Aligned_cols=248  Identities=24%  Similarity=0.384  Sum_probs=202.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-------CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-------SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-------~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~  416 (645)
                      .++|...+.||+|+||.||+|...       .++..||+|++...  ....+.+.+|+++++++ +||||++++++|.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            467888999999999999999975       34678999998763  33456799999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      +..++||||+++|+|.+++......            ...+++.+++.++.|+++||+|||+   .+|+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence            9999999999999999999865421            1248999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchh
Q 041096          485 DANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~  549 (645)
                      +.++.+|+.|..              ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......    
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----  266 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----  266 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----
Confidence            999999998732              12245678999999998889999999999999999999 99999764321    


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .+..             .+........+......+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       267 ~~~~-------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          267 ELFK-------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHH-------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHH-------------HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            1111             111111222334455678899999999999999999999999986643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=347.56  Aligned_cols=241  Identities=21%  Similarity=0.251  Sum_probs=196.7

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ..++|+..+.||+|+||.||+|....++..+|+|++....   ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            3567899999999999999999999999999999987633   3356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeeccc---
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESSF---  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~~---  496 (645)
                      |||+++|+|.+++.....    +++.++..++.||+.||+|||+   .+|+||||||+|||++.   ++.+||.|..   
T Consensus        89 ~E~~~gg~L~~~i~~~~~----~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSC----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            999999999999986543    8999999999999999999999   99999999999999984   5678887722   


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ....||+.|+|||++.+..++.++||||+||++|||++|+.||.......    +...+..    +.    
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~----~~~~i~~----~~----  229 (444)
T 3soa_A          162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR----LYQQIKA----GA----  229 (444)
T ss_dssp             CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHH----TC----
T ss_pred             EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHh----CC----
Confidence                     22468999999999999999999999999999999999999997643211    1111100    00    


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ..............+.+++..||+.||++|||+.|+++
T Consensus       230 --~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          230 --YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             --CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --CCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              00000011123456788899999999999999999987

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.2e-38  Score=334.69  Aligned_cols=250  Identities=30%  Similarity=0.450  Sum_probs=202.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEE--EEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVA--AVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~v--avK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...+.||+|+||.||+|....++..+  |+|.+..  .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            57888999999999999999998777755  8998765  334456799999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcC------------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          423 YEYMPNGSLDRMLYQDS------------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      |||+++++|.+++....            .....+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            99999999999997653            223358999999999999999999999   999999999999999999999


Q ss_pred             eeeccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhh
Q 041096          491 RLESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       491 kl~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      |+.|..           ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......    .+.      
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~------  251 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELY------  251 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHH------
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HHH------
Confidence            998732           22346788999999998889999999999999999998 99999764321    111      


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                             +.+........+......+.+++..||+.+|.+|||++++++.|+...+...
T Consensus       252 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          252 -------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             -------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             -------HHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence                   1111112222333455678899999999999999999999999987655443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-38  Score=341.93  Aligned_cols=242  Identities=21%  Similarity=0.236  Sum_probs=199.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|.+... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46799999999999999999999999999999998764 33456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC--CCCeeeeccc-------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA--NFNARLESSF-------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~--~~~~kl~d~~-------  496 (645)
                      +++|+|.+++.....   .+++.++..++.||+.||+|||+   .+|+||||||+|||++.  ++.+||.|..       
T Consensus       130 ~~gg~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          130 LSGGELFDRIAAEDY---KMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             CCCCBHHHHTTCTTC---CBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             CCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            999999999975432   38999999999999999999999   99999999999999984  4668888732       


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .....+...          ....
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~~----------~~~~  269 (387)
T 1kob_A          204 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKRC----------DWEF  269 (387)
T ss_dssp             TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHHC----------CCCC
T ss_pred             CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHHHhC----------CCCC
Confidence                2346899999999999999999999999999999999999999764321    111111000          0001


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                      ...........+.+++..||+.||++|||+.++++.
T Consensus       270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            111112334567889999999999999999999973

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-39  Score=329.03  Aligned_cols=247  Identities=21%  Similarity=0.339  Sum_probs=201.0

Q ss_pred             cCCCcCc-eeccCCceEEEEEEEC--CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNR-ILGRGAFGNVYKAYFA--SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~-~lG~G~fg~Vy~g~~~--~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...+ .||+|+||.||+|.+.  .++..||+|++...  ....+.+.+|++++++++||||+++++++ +.+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3455555 8999999999999864  45788999998773  34567899999999999999999999999 55679999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....   .+++.+++.++.|+++||+|||+   .+++||||||+||+++.++.+++.|..      
T Consensus        88 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             EECCTTEEHHHHHTTCTT---TSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEeCCCCCHHHHHHhCCc---cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            999999999999975433   38999999999999999999999   999999999999999999999998732      


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||......    .+..             
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~-------------  224 (287)
T 1u59_A          162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMA-------------  224 (287)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHH-------------
T ss_pred             cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHH-------------
Confidence                     11235788999999998889999999999999999998 99999764321    1111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVV  618 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~  618 (645)
                      .+........+...+..+.+++..||+.+|++||++.++++.|+........
T Consensus       225 ~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          225 FIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence            1111122234445567888999999999999999999999999876544433

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=7.9e-39  Score=327.77  Aligned_cols=243  Identities=25%  Similarity=0.433  Sum_probs=201.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||.||+|... ++..||+|.+.......+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence            467888999999999999999986 46789999998766667889999999999999999999999874 4689999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++++|.+++.....  ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+++.|..          
T Consensus        90 ~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T 1qpc_A           90 ENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (279)
T ss_dssp             TTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             CCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence            99999999975421  238999999999999999999999   999999999999999999999998732          


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......    .+..             .+....
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~-------------~~~~~~  227 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQ-------------NLERGY  227 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHH-------------HHHTTC
T ss_pred             ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHH-------------HHhccc
Confidence               12245678999999998889999999999999999999 89999764321    1111             111111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ....+......+.+++..||+.+|++|||++++++.|++..
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            22233344567889999999999999999999999998653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.4e-38  Score=326.36  Aligned_cols=239  Identities=23%  Similarity=0.315  Sum_probs=194.9

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  421 (645)
                      ..++|+..+.||+|+||.||+|....++..||+|++...   ......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            346788999999999999999999988999999988752   34567789999999999 99999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC--------------
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN--------------  487 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~--------------  487 (645)
                      ||||+++++|.+++.........+++.+++.++.|++.||+|||+   ++|+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            999999999999998654323448999999999999999999999   999999999999999844              


Q ss_pred             -----CCeeeeccc--------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          488 -----FNARLESSF--------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       488 -----~~~kl~d~~--------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                           ...+++|..        ....||..|+|||.+.+. .++.++|||||||++|||++|..|+.....       ..
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-------~~  238 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-------WH  238 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-------HH
T ss_pred             ccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-------HH
Confidence                 467887622        234689999999999876 567899999999999999999887643210       00


Q ss_pred             HHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                   .+........+......+.+++..||+.||++|||+.++++
T Consensus       239 -------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          239 -------------EIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             -------------HHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -------------HHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence                         00111111223334567888999999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=330.06  Aligned_cols=260  Identities=21%  Similarity=0.266  Sum_probs=197.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++.....   ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            578899999999999999999998899999998866332   35678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+++.|..        
T Consensus        83 ~~~~~~l~~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           83 YCDHTVLHELDRYQRG----VPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             CCSEEHHHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             eCCCchHHHHHhhhcC----CCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            9999999998865433    8999999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh-------hccCch
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL-------YAEGRI  564 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~-------~~~~~~  564 (645)
                          ....||..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.......       +.....
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (311)
T 4agu_A          156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY  235 (311)
T ss_dssp             ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred             ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence                23468899999999976 668999999999999999999999997654322221111110000       000000


Q ss_pred             hHHhh-hhccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          565 IEAAD-KRLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       565 ~~~~d-~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      ..... +......+     .+....+.+++..||+.||++|||++|+++  .+++..+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            00000 00000000     123455788999999999999999999986  3454433

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=6.3e-39  Score=339.53  Aligned_cols=238  Identities=22%  Similarity=0.321  Sum_probs=198.0

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      ....++|...++||+|+||.||+|+.+.+++.||+|++...    ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            34567899999999999999999999999999999998753    23455678899999887 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .|+||||+++|+|.+++.....    +++.++..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..  
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a  165 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMC  165 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence            9999999999999999986543    8999999999999999999999   999999999999999999999998732  


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    +...+           
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~i-----------  230 (345)
T 1xjd_A          166 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE----LFHSI-----------  230 (345)
T ss_dssp             BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH-----------
T ss_pred             hhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH----HHHHH-----------
Confidence                      23468999999999999999999999999999999999999997643211    11111           


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR-RVF  606 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-~vl  606 (645)
                       ...  ...++......+.+++..||+.||++||++. +++
T Consensus       231 -~~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          231 -RMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             -HHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -HhC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence             000  0122333446678889999999999999997 665

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=360.40  Aligned_cols=234  Identities=22%  Similarity=0.353  Sum_probs=195.4

Q ss_pred             eeccCCceEEEEEEEC--CCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCC
Q 041096          355 ILGRGAFGNVYKAYFA--SSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       355 ~lG~G~fg~Vy~g~~~--~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      .||+|+||.||+|.+.  .++..||||+++..  ....++|.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999875  34677999998763  3456789999999999999999999999976 56999999999999


Q ss_pred             HhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-------------
Q 041096          431 LDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-------------  497 (645)
Q Consensus       431 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-------------  497 (645)
                      |.+++.....   .+++.+++.++.||++||+|||+   .+|+||||||+||||+.++.+||.|...             
T Consensus       422 L~~~l~~~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  495 (613)
T 2ozo_A          422 LHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA  495 (613)
T ss_dssp             HHHHHTTCTT---TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred             HHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence            9999975433   48999999999999999999999   9999999999999999999999988321             


Q ss_pred             --ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          498 --LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       498 --~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ...++..|+|||++....++.++|||||||++|||++ |+.||......+    +.             +.+....+.
T Consensus       496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~----~~-------------~~i~~~~~~  558 (613)
T 2ozo_A          496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE----VM-------------AFIEQGKRM  558 (613)
T ss_dssp             ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH----HH-------------HHHHTTCCC
T ss_pred             ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HH-------------HHHHcCCCC
Confidence              1124578999999999999999999999999999998 999998654321    11             122222233


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ..+..++..+.+++..||+.+|++||++++|++.|+..
T Consensus       559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            44556678899999999999999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.6e-38  Score=336.08  Aligned_cols=238  Identities=25%  Similarity=0.339  Sum_probs=198.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..||+|++...    ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999999999999999988652    234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ||+++|+|..++....    .+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|.        
T Consensus        95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            9999999999997643    38999999999999999999999   99999999999999999999999872        


Q ss_pred             ---ccccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 ---FTLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                         ....+||+.|+|||++..   ..++.++|||||||++|||++|+.||........ ..+...             +.
T Consensus       168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~-------------~~  233 (384)
T 4fr4_A          168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHT-------------FE  233 (384)
T ss_dssp             TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHH-------------HH
T ss_pred             CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHH-------------Hh
Confidence               233579999999999974   4589999999999999999999999975433211 111111             11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-MRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~~vl~  607 (645)
                      . ....++......+.+++..||+.||.+||+ ++++.+
T Consensus       234 ~-~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          234 T-TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             H-CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             h-cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            1 112334445567888999999999999999 777764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=7.5e-39  Score=330.32  Aligned_cols=241  Identities=25%  Similarity=0.369  Sum_probs=197.0

Q ss_pred             hcCCCcCc-eeccCCceEEEEEEE--CCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          347 TRGFHSNR-ILGRGAFGNVYKAYF--ASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       347 ~~~f~~~~-~lG~G~fg~Vy~g~~--~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      .++|...+ .||+|+||.||+|.+  ...+..||||++....   ...+.+.+|++++++++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35677777 899999999999954  5567899999987632   2356799999999999999999999999 567789


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---  497 (645)
                      +||||+++++|.+++.....    +++..++.++.|++.||+|||+   .+++||||||+|||++.++.+++.|...   
T Consensus        94 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEeCCCCCHHHHHHhCcC----CCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            99999999999999986543    8999999999999999999999   9999999999999999999999987321   


Q ss_pred             ------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          498 ------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       498 ------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ...++..|+|||.+.+..++.++||||||+++|||++ |+.||......    .+.            
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~------------  230 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVT------------  230 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHH------------
T ss_pred             eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHH------------
Confidence                        1235678999999998889999999999999999999 99999764321    111            


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                       +.+........+......+.+++..||+.||.+||++.++++.|+..
T Consensus       231 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          231 -AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             -HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             11111112233445567788999999999999999999999999854

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-38  Score=327.91  Aligned_cols=245  Identities=24%  Similarity=0.337  Sum_probs=196.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCC---eEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE-EEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL-LLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~lV  422 (645)
                      .|...++||+|+||.||+|.+..++   ..+|+|.+....  ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3555688999999999999975443   379999987633  3457799999999999999999999999876655 999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-----  497 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-----  497 (645)
                      |||+.+|+|.+++.....   .+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+|+.|...     
T Consensus       102 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQR---NPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             EecccCCCHHHHHhcccc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            999999999999976433   38999999999999999999999   9999999999999999999999987321     


Q ss_pred             -----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 -----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 -----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                 ...++..|+|||.+.+..++.++||||||+++|||++|+.|+.......   .+..             
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~~-------------  239 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLTH-------------  239 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHHH-------------
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHHH-------------
Confidence                       2346788999999999999999999999999999999666654332211   1111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .+........+......+.+++..||+.+|.+|||++++++.|+++...
T Consensus       240 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          240 FLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            1111112223334456788999999999999999999999999876443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.2e-38  Score=323.94  Aligned_cols=245  Identities=20%  Similarity=0.268  Sum_probs=200.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||.||+|....++..||+|++...   ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46899999999999999999999999999999988653   334567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC---eeeeccc----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESSF----  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~---~kl~d~~----  496 (645)
                      ||+++++|.+++.....    +++..+..++.|++.||+|||+   .+++||||||+||+++.++.   +|+.|..    
T Consensus        85 e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             CCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             ecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence            99999999999876543    8999999999999999999999   99999999999999987665   8887722    


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......    .......    +.      
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~----~~------  223 (284)
T 3kk8_A          158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----LYAQIKA----GA------  223 (284)
T ss_dssp             CCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHH----TC------
T ss_pred             cccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH----HHHHHHh----cc------
Confidence                   22468999999999999999999999999999999999999997643211    1111000    00      


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ..............+.+++..||+.||++|||++|+++  .|.+.
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            00000111123456788999999999999999999987  45544

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.3e-38  Score=337.72  Aligned_cols=237  Identities=27%  Similarity=0.339  Sum_probs=194.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.|...+.||+|+||.||+|....++..||||++....    ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            45888899999999999999998889999999986532    23457899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+. |+|.+++.....   .+++.++..++.|+++||+|||+   .+|+||||||+||||+.++.+||+|..       
T Consensus       134 e~~~-g~l~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             ECCS-EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ecCC-CCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            9996 788888865433   38999999999999999999999   899999999999999999999998832       


Q ss_pred             -cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 -TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 -~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                       ....||+.|+|||++.   .+.++.++|||||||++|||++|+.||........   +    .....         ...
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~---~----~~~~~---------~~~  270 (348)
T 1u5q_A          207 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---L----YHIAQ---------NES  270 (348)
T ss_dssp             BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---H----HHHHH---------SCC
T ss_pred             CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---H----HHHHh---------cCC
Confidence             2346899999999984   56789999999999999999999999976432111   1    11110         001


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...........+.+++..||+.||++|||++++++
T Consensus       271 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          271 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            11112233456788899999999999999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-38  Score=340.14  Aligned_cols=244  Identities=26%  Similarity=0.381  Sum_probs=194.9

Q ss_pred             CCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV  422 (645)
                      .|...++||+|+||.||+|++...   +..+|+|.+...  ....+.|.+|+.++++++||||++++++|.+ .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            355678999999999999987532   246899988652  3456789999999999999999999998765 4578999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+|+||||||+||||+.++.+||.|..      
T Consensus       170 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             EECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccc
Confidence            999999999999975433   38899999999999999999999   999999999999999999999998732      


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                ....+|..|+|||.+.+..++.++|||||||++|||++ |..||......+    +....          
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~----~~~~~----------  309 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYL----------  309 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC----HHHHH----------
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH----HHHHH----------
Confidence                      12245678999999999999999999999999999999 677776543221    11111          


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                         ........+...+..+.+++..||+.+|++|||++++++.|+.+...
T Consensus       310 ---~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          310 ---LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             ---HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ---HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence               11111122334456788999999999999999999999999876443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.6e-38  Score=327.73  Aligned_cols=246  Identities=23%  Similarity=0.414  Sum_probs=195.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..++||+|+||.||+|....   .+|+|++...   ....+.+.+|++++++++|+||+++++++. .+..++||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~   98 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT   98 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence            4678999999999999999998753   4899988653   334567999999999999999999999764 45689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.....   .+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+++.|..       
T Consensus        99 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           99 QWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             EecCCCcHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence            99999999999965433   38999999999999999999999   999999999999999999999998732       


Q ss_pred             -------cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 -------TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                             ....||+.|+|||.+.   ...++.++||||||+++|||++|+.||.......   .+...+..    +..  
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~----~~~--  243 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD---QIIEMVGR----GSL--  243 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH---HHHHHHHH----TSC--
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH---HHHHHhcc----ccc--
Confidence                   1235899999999987   5678999999999999999999999997643321   11111111    000  


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                        .+.+ .......+..+.+++..||+.+|.+|||++++++.|+++..
T Consensus       244 --~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          244 --SPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             --CCCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             --Ccch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence              0000 11223455778899999999999999999999999997754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.6e-38  Score=324.39  Aligned_cols=242  Identities=24%  Similarity=0.382  Sum_probs=198.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .++|...+.||+|+||.||+|.+..   .+..||+|.+...  ....+.+.+|+.++++++||||+++++++.++ ..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence            4678889999999999999998753   3456999998763  33467899999999999999999999998754 5689


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++++|.+++.....   .+++..++.++.|+++||+|||+   .+++||||||+|||++.++.+|+.|..     
T Consensus        90 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             EEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence            9999999999999976543   38999999999999999999999   999999999999999999999998732     


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                              ....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......    ...             .
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~-------------~  226 (281)
T 3cc6_A          164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIG-------------V  226 (281)
T ss_dssp             ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHH-------------H
T ss_pred             ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHH-------------H
Confidence                    12346778999999998999999999999999999998 999997543321    111             1


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +........+......+.+++..||+.+|++||++.++++.|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          227 LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            111111122333456788899999999999999999999999854

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=9e-39  Score=342.15  Aligned_cols=239  Identities=25%  Similarity=0.327  Sum_probs=190.6

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      .+.||+|+||.||+|....++..||+|++.... ...+.+.+|++++++++||||++++++|.+.+..+|||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            567999999999999999889999999987643 4567899999999999999999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE--cCCCCeeeeccc-----------cc
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML--DANFNARLESSF-----------TL  498 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll--d~~~~~kl~d~~-----------~~  498 (645)
                      .+++.....   .+++..++.++.||++||+|||+   .+|+||||||+|||+  +.++.+||.|..           ..
T Consensus       174 ~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~  247 (373)
T 2x4f_A          174 FDRIIDESY---NLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV  247 (373)
T ss_dssp             HHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred             HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence            999875432   38999999999999999999999   999999999999999  567788998722           23


Q ss_pred             cccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCH
Q 041096          499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNE  578 (645)
Q Consensus       499 ~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  578 (645)
                      ..||+.|+|||++....++.++|||||||++|||++|+.||...........+..   ..+.           +......
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~---~~~~-----------~~~~~~~  313 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA---CRWD-----------LEDEEFQ  313 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCCC-----------SCSGGGT
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---ccCC-----------CChhhhc
Confidence            4589999999999999999999999999999999999999976543211111110   0000           0000011


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          579 DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       579 ~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      .....+.+++..||+.||.+|||++|+++  .|.+
T Consensus       314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            23456788999999999999999999987  5543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3.6e-38  Score=333.85  Aligned_cols=243  Identities=24%  Similarity=0.315  Sum_probs=197.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|+...++..||+|++...    ....+.+.+|..++.++ +||||+++++++.+.+..|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5688899999999999999999999999999998753    23345688999999988 899999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..      
T Consensus        89 ~e~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             EeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            999999999999976543    8999999999999999999999   999999999999999999999998732      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccch-hhHHHHHHhhhccCchhHHhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM-VNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .........        .+..
T Consensus       162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------~i~~  233 (345)
T 3a8x_A          162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------VILE  233 (345)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH--------HHHH
T ss_pred             CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH--------HHHc
Confidence                  2246899999999999999999999999999999999999999753221100 000000000        0111


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM------RRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~~vl~  607 (645)
                      ..  ..++......+.+++..||+.||++||++      +++++
T Consensus       234 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          234 KQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             CC--CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence            11  12334445678889999999999999995      66654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=9.4e-39  Score=332.88  Aligned_cols=257  Identities=23%  Similarity=0.362  Sum_probs=206.8

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEE-----CCCCeEEEEEeccCCc--chhHhHHHHHHHHhhc-CCCCeeee
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKNLVQL  409 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l-~H~niv~l  409 (645)
                      +...++....++|...+.||+|+||.||+|..     ..++..||||++....  ...+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            44455555668899999999999999999985     3457899999987633  3456799999999999 79999999


Q ss_pred             eeeeeeCC-eEEEEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCC
Q 041096          410 LGWCAEKG-ELLLVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRD  476 (645)
Q Consensus       410 ~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD  476 (645)
                      +++|...+ ..++||||+++|+|.+++......            ...+++..++.++.|+++||+|||+   .+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence            99988754 589999999999999999865432            1237899999999999999999999   9999999


Q ss_pred             CCCCcEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 041096          477 IKASNIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIER  541 (645)
Q Consensus       477 lkp~NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~  541 (645)
                      |||+|||++.++.+|+.|..              ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            99999999999999998732              12346788999999999999999999999999999998 9999976


Q ss_pred             cccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          542 ETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       542 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ......   +.             ..+........+......+.+++..||+.||.+|||+.++++.|+.+.
T Consensus       254 ~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          254 VKIDEE---FC-------------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             CCCSHH---HH-------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhHH---HH-------------HHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            432211   11             111111112223334567888999999999999999999999998653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.3e-38  Score=334.42  Aligned_cols=247  Identities=21%  Similarity=0.271  Sum_probs=181.1

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      .+.||+|+||.||+|....++..||||++..  .....+.+|+.++.+++ ||||+++++++.+.+..++||||+++|+|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG--GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh--hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            4789999999999999999999999999864  34567889999999997 99999999999999999999999999999


Q ss_pred             hHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeeccc------------
Q 041096          432 DRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLESSF------------  496 (645)
Q Consensus       432 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d~~------------  496 (645)
                      .+++....    .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++   .+||.|..            
T Consensus        94 ~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  166 (325)
T 3kn6_A           94 FERIKKKK----HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL  166 (325)
T ss_dssp             HHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence            99998754    38999999999999999999999   9999999999999997765   68887732            


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC-
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA-  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-  575 (645)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.............+             .+.....+. 
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-------------~~~~i~~~~~  233 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-------------IMKKIKKGDF  233 (325)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-------------HHHHHTTTCC
T ss_pred             cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-------------HHHHHHcCCC
Confidence            234579999999999999999999999999999999999999976543211111111             111111111 


Q ss_pred             -CC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCCCCC
Q 041096          576 -FN----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVVPKL  621 (645)
Q Consensus       576 -~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~p~~  621 (645)
                       ++    ......+.+++..||+.||++|||++++++  .+++..+.+..|..
T Consensus       234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~~  286 (325)
T 3kn6_A          234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLM  286 (325)
T ss_dssp             CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCCS
T ss_pred             CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCCC
Confidence             11    123467888999999999999999999985  46655544444433

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.8e-38  Score=324.44  Aligned_cols=257  Identities=18%  Similarity=0.192  Sum_probs=203.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeee-eeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC-AEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~-~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.... ..+.+.+|+.++..++|++++..++++ .+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence            468999999999999999999998889999999876533 335689999999999998877766665 556788999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~------  496 (645)
                      + +++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||+   +.++.+|++|..      
T Consensus        87 ~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           87 L-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             c-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9 9999999975433   38999999999999999999999   999999999999999   588889998721      


Q ss_pred             -------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          497 -------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                   ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.........   
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---  236 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS---  236 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH---
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC---
Confidence                         2346899999999999999999999999999999999999999865432222111111100000   


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCCC
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKL  621 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~~  621 (645)
                         ...+.+.    ...+..+.+++..||+.||.+|||++++++.|+........+..
T Consensus       237 ---~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~  287 (296)
T 3uzp_A          237 ---TPIEVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD  287 (296)
T ss_dssp             ---SCHHHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred             ---CchHHHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence               0001111    12345688899999999999999999999999977655554433

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-38  Score=335.05  Aligned_cols=252  Identities=23%  Similarity=0.256  Sum_probs=199.2

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC------CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH------SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~------~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      ++....++|+..+.||+|+||.||+|....++..+|+|++..      .....+.+.+|++++++++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            445667889999999999999999999999999999998754      23445789999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCC------------------------------------CccCCHHHHHHHHHHHHH
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSEN------------------------------------GVLLSWYHRLNIVVGLAS  459 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~  459 (645)
                      .+..++||||+++|+|.+++......                                    ...+++..+..++.|++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            99999999999999999998531110                                    112467778899999999


Q ss_pred             HHHHHhhcCCCCeeeCCCCCCcEEEcCCC--Ceeeeccc----------------cccccCCcccCcccccC--CCCCcc
Q 041096          460 ALTYLHQECEQQVIHRDIKASNIMLDANF--NARLESSF----------------TLTAGTMGYLAPEYLQY--GTATEK  519 (645)
Q Consensus       460 gL~yLH~~~~~~ivHrDlkp~NIlld~~~--~~kl~d~~----------------~~~~gt~~y~APE~~~~--~~~t~k  519 (645)
                      ||+|||+   .+|+||||||+||||+.++  .+||+|..                ....||+.|+|||.+.+  ..++.+
T Consensus       180 ~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            9999999   8999999999999998776  78987732                23468999999999975  678999


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC--CCCHHHHHHHHHHHHHccCCCCC
Q 041096          520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG--AFNEDEMKRLLLVGLSCANPDSS  597 (645)
Q Consensus       520 sDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~  597 (645)
                      +|||||||++|||++|+.||...........                ........  .........+.+++..||+.+|.
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQ----------------VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----------------HHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHH----------------HHhcccccCCcccccCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999976543211111                11111100  00112345678899999999999


Q ss_pred             CCCCHHHHHH--HHcCC
Q 041096          598 ARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       598 ~RPt~~~vl~--~L~~~  612 (645)
                      +||++.++++  .+++.
T Consensus       321 ~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          321 ERFDAMRALQHPWISQF  337 (345)
T ss_dssp             TSCCHHHHHHSHHHHTT
T ss_pred             HCCCHHHHhcChhhccC
Confidence            9999999987  45544

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.3e-38  Score=325.45  Aligned_cols=256  Identities=18%  Similarity=0.199  Sum_probs=199.8

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeee-eeCCeEEEEEe
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC-AEKGELLLVYE  424 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~-~~~~~~~lV~E  424 (645)
                      ..++|+..+.||+|+||.||+|....++..||||+..... ....+.+|++++..++|++++..++++ .+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            4578999999999999999999998889999999865532 334688999999999988877777766 56678899999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc-----
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF-----  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~-----  496 (645)
                      |+ +++|.+++.....   .+++.+++.++.|++.||+|||+   .+|+||||||+|||+   +.++.+||+|..     
T Consensus        86 ~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             CC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             cc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            99 9999999975433   38999999999999999999999   999999999999999   788899998722     


Q ss_pred             --------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          497 --------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                    ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-  237 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-
Confidence                          13368999999999999999999999999999999999999998754333222221111100000 


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCC
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVP  619 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p  619 (645)
                      .     .+.+.    ...+..+.+++..||+.+|++|||++++++.|++..+....+
T Consensus       238 ~-----~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~  285 (296)
T 4hgt_A          238 P-----IEVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS  285 (296)
T ss_dssp             C-----HHHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             h-----hhhhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            0     00111    112457888999999999999999999999998776544433

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=3.3e-38  Score=334.01  Aligned_cols=252  Identities=17%  Similarity=0.219  Sum_probs=193.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCCcc------------hhHhHHHHHHHHhhcCCCCeeeeeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHSHE------------GKTEFLAELSIIACLRHKNLVQLLGW  412 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~~~------------~~~~~~~Ei~~l~~l~H~niv~l~g~  412 (645)
                      ++|...+.||+|+||.||+|....   .+..+|+|+......            ....+.+|+..+..++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            578889999999999999999976   678999998876432            12346788899999999999999999


Q ss_pred             eee----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          413 CAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       413 ~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      +..    ....++||||+ +++|.+++....    .+++.+++.++.|++.||+|||+   .+|+||||||+||||+.++
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCC
Confidence            987    67899999999 999999997654    39999999999999999999999   9999999999999999887


Q ss_pred             --Ceeeeccc-------------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc
Q 041096          489 --NARLESSF-------------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK  547 (645)
Q Consensus       489 --~~kl~d~~-------------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~  547 (645)
                        .+||.|..                   ....||..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence              89998722                   223689999999999999999999999999999999999999965322111


Q ss_pred             hhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          548 MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       548 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .  ... ....... .+.+.+.....   ....+..+.+++..||+.||++||++++|++.|+....
T Consensus       269 ~--~~~-~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          269 A--VQT-AKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             H--HHH-HHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             H--HHH-HHHhhcc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            1  111 1110000 11111111110   11234578889999999999999999999999997543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=345.59  Aligned_cols=249  Identities=23%  Similarity=0.277  Sum_probs=202.1

Q ss_pred             cCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          338 FSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      +.+++++...++|+..++||+|+||+||++..+.+++.||||++.+.    ....+.+.+|..++.+++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            34556666678999999999999999999999989999999998652    22345688999999999999999999999


Q ss_pred             eeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       414 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                      .+.+..||||||+++|+|.+++.+...   .+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~  204 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLA  204 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEe
Confidence            999999999999999999999986532   38999999999999999999999   999999999999999999999998


Q ss_pred             ccc-------------cccccCCcccCccccc-------CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHH
Q 041096          494 SSF-------------TLTAGTMGYLAPEYLQ-------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD  553 (645)
Q Consensus       494 d~~-------------~~~~gt~~y~APE~~~-------~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~  553 (645)
                      |..             ...+||+.|+|||++.       ...++.++|||||||++|||++|+.||...........+..
T Consensus       205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  284 (412)
T 2vd5_A          205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH  284 (412)
T ss_dssp             CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            721             1247999999999987       45689999999999999999999999976543221111111


Q ss_pred             HHHhhhccCchhHHhhhhcc-CCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 041096          554 WVWGLYAEGRIIEAADKRLN-GAFNEDEMKRLLLVGLSCANPDSSAR---PSMRRVFQ  607 (645)
Q Consensus       554 ~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~~vl~  607 (645)
                      +.              ..+. ...+......+.+++..||. +|.+|   |+++|+++
T Consensus       285 ~~--------------~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          285 YK--------------EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HH--------------HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             cc--------------cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            10              0010 11112345667888899999 99998   68999976

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.1e-38  Score=323.64  Aligned_cols=242  Identities=20%  Similarity=0.310  Sum_probs=198.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----------
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----------  415 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----------  415 (645)
                      ..++|+..+.||+|+||.||+|....++..||+|++....   ..+.+|++++++++||||+++++++..          
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            3457889999999999999999998889999999987643   467899999999999999999998854          


Q ss_pred             ------CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC
Q 041096          416 ------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN  489 (645)
Q Consensus       416 ------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~  489 (645)
                            ....++||||+++++|.+++.....  ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCC
Confidence                  4458999999999999999976532  248999999999999999999999   99999999999999999999


Q ss_pred             eeeeccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          490 ARLESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       490 ~kl~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      +++.|..           ....||+.|+|||.+.+..++.++||||||+++|||++|..|+....      ...    . 
T Consensus       161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~----~-  229 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFF----T-  229 (284)
T ss_dssp             EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHH----H-
T ss_pred             EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHH----H-
Confidence            9998732           23468999999999999999999999999999999999998864311      010    0 


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                             ...+..+    +......+.+++..||+.||.+|||+.++++.|......+.
T Consensus       230 -------~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          230 -------DLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             -------HHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             -------Hhhcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence                   0111111    22233457788899999999999999999999987665544

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2.5e-38  Score=325.63  Aligned_cols=241  Identities=24%  Similarity=0.292  Sum_probs=194.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|...+.||+|+||.||++....++..+|+|++...  ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            5688899999999999999999988999999988663  33457899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~------  496 (645)
                      +++|+|.+++.........+++..++.++.|+++||+|||+   .+|+||||||+|||+   +.++.+||.|..      
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            99999999997653333459999999999999999999999   999999999999999   455778887732      


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||+.|+|||.+. +.++.++||||||+++|||++|+.||.......    .......  .        .+.
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~----~~~~~~~--~--------~~~  243 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE----VQQKATY--K--------EPN  243 (285)
T ss_dssp             --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHH--C--------CCC
T ss_pred             CcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH----HHhhhcc--C--------Ccc
Confidence                 2346899999999886 568999999999999999999999997643211    1111000  0        000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ... ........+.+++..||+.||++|||++|+++
T Consensus       244 ~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          244 YAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000 00112456778899999999999999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6.2e-38  Score=320.74  Aligned_cols=235  Identities=21%  Similarity=0.282  Sum_probs=196.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            45788999999999999999999998999999988663 34467899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~------  496 (645)
                      +++++|.+++.....    +++.++..++.|++.||+|||+   .+++||||||+|||+   +.++.+++.|..      
T Consensus        88 ~~~~~L~~~~~~~~~----~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           88 CTGGELFERVVHKRV----FRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             cCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            999999999976543    8999999999999999999999   999999999999999   788889998732      


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||+.|+|||.+.+. ++.++||||||+++|||++|+.||.......    .....             ...
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~-------------~~~  222 (277)
T 3f3z_A          161 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----VMLKI-------------REG  222 (277)
T ss_dssp             TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH-------------HHC
T ss_pred             CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH----HHHHH-------------HhC
Confidence                 234689999999998754 8999999999999999999999997643211    11100             000


Q ss_pred             ccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          572 LNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      . ...+.    .....+.+++..|++.||++|||+.++++
T Consensus       223 ~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          223 T-FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             C-CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             C-CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 01122    12457888999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3e-38  Score=330.75  Aligned_cols=236  Identities=22%  Similarity=0.290  Sum_probs=197.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|.+.....       ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            4568889999999999999999998899999998765321       356799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeecc
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF----NARLESS  495 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d~  495 (645)
                      ++||||+++++|.+++....    .+++..++.++.|++.||+|||+   .+|+||||||+|||++.++    .+++.|.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Df  163 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence            99999999999999997643    38999999999999999999999   9999999999999999888    6888772


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .           ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......    ........      
T Consensus       164 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~~~------  233 (321)
T 2a2a_A          164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANITSV------  233 (321)
T ss_dssp             TTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHTT------
T ss_pred             ccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhc------
Confidence            2           23468999999999999999999999999999999999999997643211    11111000      


Q ss_pred             hHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 IEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 ~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                              ....+.    .....+.+++..||+.||++|||++++++
T Consensus       234 --------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          234 --------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             --------CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             --------ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                    001111    12356788999999999999999999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.4e-38  Score=359.79  Aligned_cols=233  Identities=26%  Similarity=0.393  Sum_probs=193.9

Q ss_pred             ceeccCCceEEEEEEE--CCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYF--ASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~--~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      +.||+|+||.||+|.+  ...+..||||+++..   ....+++.+|++++++++|||||+++++|.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999965  445688999998763   2335789999999999999999999999964 568999999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|.+++.....    +++.+++.|+.||+.||+|||+   .+|+||||||+||||+.++.+||.|..            
T Consensus       454 g~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          454 GPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  526 (635)
T ss_dssp             EEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred             CCHHHHHhhCCC----CCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence            999999976443    8999999999999999999999   999999999999999999999998832            


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....+|..|+|||++....++.++|||||||++|||++ |+.||.......                 +.+.+....
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~~~i~~~~  589 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------VTAMLEKGE  589 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHHTTC
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcCC
Confidence               11235678999999999999999999999999999998 999997643211                 112222222


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ....+..++..+.+++..||+.||++||++++|++.|++
T Consensus       590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            334455567788999999999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.2e-38  Score=326.73  Aligned_cols=255  Identities=24%  Similarity=0.299  Sum_probs=194.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC------cchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS------HEGKTEFLAELSIIACLR---HKNLVQLLGWCAEK  416 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~------~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~  416 (645)
                      .+++|+..+.||+|+||+||+|....++..||||++...      ......+.+|+.++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999999888999999987642      122346778888877765   99999999999876


Q ss_pred             C-----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          417 G-----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       417 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      .     ..++||||+. ++|.+++.....  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+|
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~k  160 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVK  160 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEE
Confidence            5     5899999996 699999976543  238999999999999999999999   9999999999999999999999


Q ss_pred             eeccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          492 LESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       492 l~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      |.|..           ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.+.. ....
T Consensus       161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~  239 (308)
T 3g33_A          161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI-GLPP  239 (308)
T ss_dssp             ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHH-CCCC
T ss_pred             EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCC
Confidence            98832           23468999999999999999999999999999999999999997654332222221111 0000


Q ss_pred             cCchhH---Hhhhhcc--CC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 EGRIIE---AADKRLN--GA-----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 ~~~~~~---~~d~~l~--~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ......   .......  ..     ...+....+.+++..||+.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            000000   0000000  00     01123456788999999999999999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=7.3e-38  Score=321.58  Aligned_cols=242  Identities=24%  Similarity=0.361  Sum_probs=201.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||+|....++..||+|.+...    ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5788899999999999999999988999999988652    223467899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.....    +++..+..++.|+++||+|||+   .+++||||||+||+++.++.+++.|..       
T Consensus        94 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGR----FDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             CCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            99999999999986543    8999999999999999999998   999999999999999999999998732       


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....|++.|+|||.+.+..++.++||||||+++|||++|+.||.......    ...            .+...  .
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~------------~~~~~--~  228 (284)
T 2vgo_A          167 LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----THR------------RIVNV--D  228 (284)
T ss_dssp             SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH------------HHHTT--C
T ss_pred             cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----HHH------------HHhcc--c
Confidence               23468999999999999999999999999999999999999997643211    111            01111  1


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      ..++......+.+++..|++.||.+||+++++++  .+.....
T Consensus       229 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            1223334556788999999999999999999987  5554433

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.9e-38  Score=335.44  Aligned_cols=237  Identities=24%  Similarity=0.331  Sum_probs=198.4

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~  420 (645)
                      ..++|+..++||+|+||.||+|....++..||+|++...    ....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            346899999999999999999999988999999998752    23456688999999988 7999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+++|+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..    
T Consensus        98 lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999999986543    8999999999999999999999   999999999999999999999998732    


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    +...            +.
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~------------i~  234 (353)
T 2i0e_A          171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQS------------IM  234 (353)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH------------HH
T ss_pred             cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH----HHHH------------HH
Confidence                    23468999999999999999999999999999999999999997643211    1111            11


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      ...  ..++......+.+++..||+.||.+||+     ++++++
T Consensus       235 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          235 EHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HCC--CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             hCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            111  1233344567888999999999999995     577765

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.2e-38  Score=323.73  Aligned_cols=235  Identities=23%  Similarity=0.302  Sum_probs=195.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|....++..+|+|.+....       ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46888999999999999999999889999999876522       13567999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC----Ceeeeccc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF----NARLESSF  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~----~~kl~d~~  496 (645)
                      +||||+++++|.+++.....    +++.+++.++.|++.||+|||+   .+++||||||+||+++.++    .+++.|..
T Consensus        85 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEeecCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            99999999999999976443    8999999999999999999999   9999999999999998877    78887732


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                 ....|++.|+|||.+.+..++.++||||||+++|||++|+.||.......    .......    .   
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~----~---  226 (283)
T 3bhy_A          158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNISA----V---  226 (283)
T ss_dssp             TCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHT----T---
T ss_pred             cceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH----HHHHhHh----c---
Confidence                       22358999999999999999999999999999999999999997643211    1110000    0   


Q ss_pred             HHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                             ....+.    .....+.+++..||+.||++|||+.++++
T Consensus       227 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          227 -------NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -------CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -------ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence                   001111    12456788999999999999999999987

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=7e-38  Score=324.83  Aligned_cols=236  Identities=23%  Similarity=0.350  Sum_probs=198.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .+.|...+.||+|+||.||+|....++..||+|++...  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35688899999999999999999888999999998653  3446789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++...     .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..        
T Consensus       101 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  172 (303)
T 3a7i_A          101 YLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  172 (303)
T ss_dssp             CCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred             eCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence            99999999999642     38999999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||..|+|||.+.+..++.++||||||+++|||++|+.||......    .....             +....
T Consensus       173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~-------------~~~~~  235 (303)
T 3a7i_A          173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFL-------------IPKNN  235 (303)
T ss_dssp             BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH-------------HHHSC
T ss_pred             ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHHH-------------hhcCC
Confidence                2245889999999999999999999999999999999999999754321    11111             11111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ....+......+.+++..||+.+|.+|||+.++++
T Consensus       236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11222233456888999999999999999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=341.45  Aligned_cols=264  Identities=22%  Similarity=0.254  Sum_probs=208.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--eEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--ELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~  423 (645)
                      ++|...++||+|+||.||+|.+..++..||||++...  ....+.+.+|++++++++||||+++++++.+.+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            5688899999999999999999999999999998753  234567889999999999999999999988755  789999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----cCCCCeeeeccc---
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML----DANFNARLESSF---  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll----d~~~~~kl~d~~---  496 (645)
                      ||+++|+|.+++..... ...+++..++.++.|++.||+|||+   .+|+||||||+||||    +.++.+||+|..   
T Consensus        89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            99999999999976543 2238999999999999999999999   999999999999999    777778887722   


Q ss_pred             --------cccccCCcccCcccccC--------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY--------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~--------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                              ....||..|+|||++..        ..++.++|||||||++|||++|+.||............+..+.....
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p  244 (396)
T 4eut_A          165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (396)
T ss_dssp             ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred             EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence                    23468999999999865        46788999999999999999999999764433322222222211110


Q ss_pred             cCchh---HH------h--hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          561 EGRII---EA------A--DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       561 ~~~~~---~~------~--d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .....   ..      .  +..............+..++..||+.||++||+++++++.++.+.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            00000   00      0  00111234577888999999999999999999999999998876554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.6e-38  Score=329.91  Aligned_cols=235  Identities=23%  Similarity=0.309  Sum_probs=191.8

Q ss_pred             cCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCCc-----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHSH-----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~  419 (645)
                      ++|+..+.||+|+||.||++...   .++..+|+|++....     .....+.+|++++++++||||+++++++...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            57888999999999999999984   578999999987632     2345688999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||+++++|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..   
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGI----FMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEeCCCCCcHHHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            999999999999999976543    8899999999999999999999   999999999999999999999998732   


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......    ....            +
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~------------i  233 (327)
T 3a62_A          170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----TIDK------------I  233 (327)
T ss_dssp             ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHH------------H
T ss_pred             ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----HHHH------------H
Confidence                     22468999999999999999999999999999999999999997643211    1111            1


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ....  ..++......+.+++..||+.||++||     +++++++
T Consensus       234 ~~~~--~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          234 LKCK--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHTC--CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HhCC--CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            1111  122333456778899999999999999     7888876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.1e-38  Score=327.99  Aligned_cols=249  Identities=20%  Similarity=0.225  Sum_probs=199.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|...+.||+|+||.||+|....++..||+|++....    ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            478999999999999999999999889999999987532    2246789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....    +++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+++.|..      
T Consensus       113 ~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGP----LAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EECCCCEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEecCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            999999999999986543    8999999999999999999999   999999999999999999999998732      


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ....|++.|+|||.+.+..++.++||||||+++|||++|+.||......    .+....    ....      
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~----~~~~------  251 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VMGAHI----NQAI------  251 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HHHHHH----HSCC------
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HHHHHh----ccCC------
Confidence                   1236889999999999999999999999999999999999999764321    111100    0000      


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHcCCCCCCC
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARP-SMRRVFQILNNEAEPLV  617 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~~vl~~L~~~~~~~~  617 (645)
                      + .........+..+.+++..||+.||++|| +++++++.|+.......
T Consensus       252 ~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          252 P-RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             C-CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             C-CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            0 00112233445688899999999999999 99999999987765554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.2e-38  Score=333.56  Aligned_cols=254  Identities=24%  Similarity=0.374  Sum_probs=202.8

Q ss_pred             CCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC--CeEEE
Q 041096          350 FHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEK--GELLL  421 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~l  421 (645)
                      |+..+.||+|+||+||++.+    ..++..||||++....  ...+.+.+|++++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47889999999999988865    3468899999987643  3456799999999999999999999999874  67899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++....     +++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.++|.|..     
T Consensus       113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  184 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccc
Confidence            999999999999997543     8999999999999999999999   999999999999999999999998732     


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ....||..|+|||.+.+..++.++||||||+++|||++|+.||......  ......+.........+.+
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK--FLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH--HHHHHCSCCHHHHHHHHHH
T ss_pred             cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh--hhhhhcccccchhHHHHHH
Confidence                      1234677899999999989999999999999999999999998753211  0000000000111112333


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .+........+......+.+++..||+.||++|||++++++.|+.+.
T Consensus       263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            44444444555666778999999999999999999999999998653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=7.9e-38  Score=319.44  Aligned_cols=239  Identities=24%  Similarity=0.308  Sum_probs=197.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..+.||+|+||.||+|....++..||+|.+..  .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            4578889999999999999999998899999998864  23445789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|.+++....    .+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..        
T Consensus        86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence            999999999996543    38999999999999999999999   999999999999999999999998722        


Q ss_pred             ------cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                            ....||..|+|||.+.+..+ +.++||||||+++|||++|+.||........  .+..+...            
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~------------  224 (276)
T 2yex_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKEK------------  224 (276)
T ss_dssp             TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHHHTT------------
T ss_pred             cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHhhhc------------
Confidence                  22358899999999987665 7899999999999999999999976443211  11111110            


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .............+.+++..||+.||++|||++++++
T Consensus       225 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          225 -KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             -CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence             0000011123456778999999999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=6.3e-38  Score=326.70  Aligned_cols=250  Identities=24%  Similarity=0.358  Sum_probs=197.3

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG  417 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~  417 (645)
                      ....++|...+.||+|+||.||+|....   ++..||+|++...   ....+.+.+|+.++++++||||+++++++.+.+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            3345678888999999999999998764   4568999998753   233567899999999999999999999998755


Q ss_pred             -----eEEEEEecCCCCCHhHHhhhcC--CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          418 -----ELLLVYEYMPNGSLDRMLYQDS--ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       418 -----~~~lV~Ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                           ..++||||+++++|.+++....  .....+++..++.++.|+++||.|||+   .+|+||||||+|||++.++.+
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCE
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcE
Confidence                 3599999999999999986432  223459999999999999999999999   999999999999999999999


Q ss_pred             eeecccc--------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHH
Q 041096          491 RLESSFT--------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWV  555 (645)
Q Consensus       491 kl~d~~~--------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~  555 (645)
                      |+.|...              ...+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......    +... 
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~~~-  261 (313)
T 3brb_A          187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE----MYDY-  261 (313)
T ss_dssp             EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHHH-
T ss_pred             EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HHHH-
Confidence            9987321              2245778999999999999999999999999999999 888987643321    1111 


Q ss_pred             HhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       556 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                                  +........+......+.+++..||+.+|.+|||+.++++.|+.+.
T Consensus       262 ------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          262 ------------LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             ------------HHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ------------HHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                        1111112233345567889999999999999999999999998654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-38  Score=322.49  Aligned_cols=237  Identities=22%  Similarity=0.336  Sum_probs=178.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|...+.||+|+||.||+|....++..||+|.+....    ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            357888999999999999999998889999999986522    2246789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....   .+++.+++.++.|+++||+|||+   .+++||||||+||+++.++.+++.|..      
T Consensus        90 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVK---PFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EECCTTEEHHHHHHTCSS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCcHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            999999999999976533   38999999999999999999999   999999999999999999999998732      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........    .            .....
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~------------~~~~~  227 (278)
T 3cok_A          164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----N------------KVVLA  227 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSS
T ss_pred             CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----H------------HHhhc
Confidence                  1245889999999999989999999999999999999999999764322110    0            00000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .  ...+......+.+++..||+.||++|||++++++
T Consensus       228 ~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          228 D--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             c--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            0  0122233456788999999999999999999986

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.7e-38  Score=332.42  Aligned_cols=231  Identities=24%  Similarity=0.303  Sum_probs=195.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------GKTEFLAELSIIACLRHKNLVQLLGWCAEKG  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~  417 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.....         ....+.+|++++++++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            4679999999999999999999999999999998876321         3446888999999999999999999999999


Q ss_pred             eEEEEEecCCCC-CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          418 ELLLVYEYMPNG-SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       418 ~~~lV~Ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      ..++||||+.+| +|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~----l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPR----LDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCC----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecc
Confidence            999999999777 99999976543    8999999999999999999999   999999999999999999999998732


Q ss_pred             -----------cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......                  
T Consensus       176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------------------  237 (335)
T 3dls_A          176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------------------  237 (335)
T ss_dssp             TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT------------------
T ss_pred             cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH------------------
Confidence                       22458999999999988776 889999999999999999999997532110                  


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                          ....  ..+......+.+++..||+.||++|||++++++.
T Consensus       238 ----~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          238 ----EAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ----TTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ----hhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                0000  1111134567888999999999999999999984

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=4.7e-38  Score=334.51  Aligned_cols=253  Identities=23%  Similarity=0.309  Sum_probs=200.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++...  ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            5788899999999999999999989999999998763  33456799999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      +++++|.+++.....    +++..+..++.|++.||+|||+   . +|+||||||+|||++.++.++|.|..        
T Consensus       113 ~~~~~L~~~l~~~~~----~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             CTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             CCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            999999999986543    8999999999999999999998   5 89999999999999999999998832        


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHH----------------------
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLV----------------------  552 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~----------------------  552 (645)
                        ....||+.|+|||++.+..++.++|||||||++|||++|+.||.............                      
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence              23478999999999999999999999999999999999999997643211100000                      


Q ss_pred             HHHHhhhccCchhHHhhhhccC---CC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          553 DWVWGLYAEGRIIEAADKRLNG---AF-NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       553 ~~~~~~~~~~~~~~~~d~~l~~---~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .+...........+.++.....   .. .......+.+++..||+.||++|||++++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            0000000001111222211111   11 1123456888999999999999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=6.4e-38  Score=324.16  Aligned_cols=244  Identities=26%  Similarity=0.367  Sum_probs=193.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~l  421 (645)
                      .+|+..++||+|+||.||+|.+..+   ...+|+|.+...  ....+.+.+|+.++++++||||++++++|.+ ++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4577789999999999999997543   346899988763  3345679999999999999999999998654 567899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++|+|.+++.....   .+++.+++.++.|+++||+|||+   .+++||||||+|||++.++.+|+.|..     
T Consensus       105 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             EEeCCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccc
Confidence            9999999999999975433   38999999999999999999999   999999999999999999999998732     


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC-CCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACG-RRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG-~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....||+.|+|||.+.+..++.++||||||+++|||++| ..||.......    ....          
T Consensus       179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~----~~~~----------  244 (298)
T 3f66_A          179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVY----------  244 (298)
T ss_dssp             SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT----HHHH----------
T ss_pred             cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH----HHHH----------
Confidence                       123466789999999999999999999999999999995 55554432211    1111          


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                         +........+...+..+.+++..||+.+|++|||++++++.|+.+..
T Consensus       245 ---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          245 ---LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             ---HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence               11111112233345678889999999999999999999999986543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.4e-38  Score=330.82  Aligned_cols=255  Identities=19%  Similarity=0.286  Sum_probs=190.4

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ....++|+..++||+|+||+||+|....++..||||++....   ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            344578999999999999999999999999999999987532   23456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc-----CCCCeeeecc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-----ANFNARLESS  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld-----~~~~~kl~d~  495 (645)
                      +||||++ |+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+     .++.+||.|.
T Consensus       110 lv~e~~~-~~L~~~~~~~~~----~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df  181 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNPD----VSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF  181 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred             EEEecCC-CCHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence            9999997 599999976543    8999999999999999999999   9999999999999994     4455898873


Q ss_pred             c------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          496 F------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       496 ~------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                      .            ....||..|+|||++.+. .++.++|||||||++|||++|+.||...........+.... ......
T Consensus       182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~  260 (329)
T 3gbz_A          182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL-GLPDDT  260 (329)
T ss_dssp             THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCTT
T ss_pred             CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh-CCCchh
Confidence            2            234679999999999874 48999999999999999999999997654322221111110 000000


Q ss_pred             chhHH-----hh---hhccCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEA-----AD---KRLNGA-----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~-----~d---~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .....     ..   +.....     ........+.+++..||+.||++|||++|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00000     00   000000     00112356788999999999999999999987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.1e-38  Score=323.30  Aligned_cols=241  Identities=29%  Similarity=0.425  Sum_probs=197.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-CeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-GELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|...  +..||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            467888999999999999999885  7899999987643 556799999999999999999999997654 478999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....  ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|..         
T Consensus        97 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A           97 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             CTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             CCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            999999999976432  237899999999999999999999   999999999999999999999998732         


Q ss_pred             cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCC
Q 041096          497 TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA  575 (645)
Q Consensus       497 ~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  575 (645)
                      ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......    .+..             .+.......
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~-------------~~~~~~~~~  234 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVP-------------RVEKGYKMD  234 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHH-------------HHTTTCCCC
T ss_pred             cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH-------------HHhcCCCCC
Confidence            22357889999999999999999999999999999998 99999764321    1111             111112223


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       576 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .+......+.+++..||+.||++||++.++++.|+.+
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            3444567788999999999999999999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=8.4e-38  Score=326.07  Aligned_cols=256  Identities=20%  Similarity=0.262  Sum_probs=195.3

Q ss_pred             cCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      +.|... ++||+|+||.||+|....++..||||++... ....+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            456663 7899999999999999888999999998763 34467799999999985 79999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC---eeeecccc----
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESSFT----  497 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~---~kl~d~~~----  497 (645)
                      |+++|+|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||++.++.   +|+.|...    
T Consensus        92 ~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             CCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             cCCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            9999999999987543    8999999999999999999999   99999999999999998776   88877311    


Q ss_pred             ---------------ccccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh
Q 041096          498 ---------------LTAGTMGYLAPEYLQY-----GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       498 ---------------~~~gt~~y~APE~~~~-----~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                                     ...||+.|+|||++..     ..++.++|||||||++|||++|+.||............... ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~  243 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA-CP  243 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C-CH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc-ch
Confidence                           2248999999999875     55789999999999999999999999765432211000000 00


Q ss_pred             hhccCchhHHhhhhccCCCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          558 LYAEGRIIEAADKRLNGAFNED----EMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      . ....+.+.+.... ..++..    ....+.+++..||+.||++|||++|+++  .+++..
T Consensus       244 ~-~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          244 A-CQNMLFESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             H-HHHHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             h-HHHHHHHHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            0 0000111111110 112221    2456889999999999999999999998  455443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.9e-38  Score=336.98  Aligned_cols=259  Identities=23%  Similarity=0.322  Sum_probs=191.5

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCC--e
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKG--E  418 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~--~  418 (645)
                      ...++|+..+.||+|+||.||+|.+..++..||||++...   ....+.+.+|+.++.++. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3457899999999999999999999999999999988652   334567889999999997 999999999997543  7


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-  497 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-  497 (645)
                      .|+|||||+ ++|..++...     .+++..+..++.|++.||+|||+   .+|+||||||+||||+.++.+||.|... 
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a  156 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLS  156 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence            899999996 6999999763     28999999999999999999999   9999999999999999999999987321 


Q ss_pred             --------------------------------ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          498 --------------------------------LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       498 --------------------------------~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                                                      ..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                                            1368999999999986 6789999999999999999999999986543


Q ss_pred             ccchhhHHHHHHhhhcc--------CchhHHhh---hh-------ccC------------CCCHHHHHHHHHHHHHccCC
Q 041096          545 GHKMVNLVDWVWGLYAE--------GRIIEAAD---KR-------LNG------------AFNEDEMKRLLLVGLSCANP  594 (645)
Q Consensus       545 ~~~~~~l~~~~~~~~~~--------~~~~~~~d---~~-------l~~------------~~~~~~~~~l~~l~~~Cl~~  594 (645)
                      ......+... ......        ......+.   ..       ...            .........+.+++..||+.
T Consensus       237 ~~~~~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~  315 (388)
T 3oz6_A          237 MNQLERIIGV-IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF  315 (388)
T ss_dssp             HHHHHHHHHH-HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHh-cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence            2222111110 000000        00000000   00       000            00012245678899999999


Q ss_pred             CCCCCCCHHHHHHH--HcCCC
Q 041096          595 DSSARPSMRRVFQI--LNNEA  613 (645)
Q Consensus       595 dP~~RPt~~~vl~~--L~~~~  613 (645)
                      ||++|||++|+++.  |....
T Consensus       316 dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          316 NPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             SGGGSCCHHHHTTSTTTTTTC
T ss_pred             CcccCCCHHHHhCCHHHHHhc
Confidence            99999999999875  55443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=7.5e-38  Score=344.66  Aligned_cols=242  Identities=21%  Similarity=0.347  Sum_probs=201.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||+|....++..||||++....    .....+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            57888999999999999999999899999999986522    23457899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++....    .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||.|..       
T Consensus        96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            9999999999997543    38999999999999999999999   999999999999999999999998721       


Q ss_pred             ----cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||......    .+...+            .+..
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i------------~~~~  232 (476)
T 2y94_A          169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFKKI------------CDGI  232 (476)
T ss_dssp             TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHHHH------------HTTC
T ss_pred             cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHHHH------------hcCC
Confidence                23468999999999998765 78999999999999999999999764321    111111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      .  ..+......+.+++..||+.||.+|||++++++  .+....+
T Consensus       233 ~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          233 F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            1  122223456788899999999999999999997  5665443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.8e-37  Score=345.93  Aligned_cols=243  Identities=25%  Similarity=0.320  Sum_probs=201.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...++||+|+||.||+|+...+++.||+|++...    ....+.+.+|++++++++||||+++++++.+.+.+|+||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            5688889999999999999999989999999998652    233467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|..++.........+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..       
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            9999999999998765444569999999999999999999999   999999999999999999999998721       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+            ....
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i------------~~~~  409 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV------------LEQA  409 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH------------HHCC
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH------------hhcc
Confidence                 22379999999999999999999999999999999999999997653322211121111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSM-----RRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~~vl~  607 (645)
                        ..++......+.+++..||+.||++||++     +++++
T Consensus       410 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          410 --VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             --CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             --cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence              12334445677888999999999999975     66654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.3e-38  Score=322.85  Aligned_cols=242  Identities=21%  Similarity=0.321  Sum_probs=201.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|...+.||+|+||.||++....++..+|+|.+...    ....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35788899999999999999999999999999987652    23456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....    +++.+++.++.|+++||+|||+   .+++||||||+|||++.++.+++.|..      
T Consensus        94 ~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKA----LTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             EECCTTCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            999999999999876543    8999999999999999999999   999999999999999999999998722      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......    ...            .....
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~------------~~~~~  230 (294)
T 2rku_A          167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYL------------RIKKN  230 (294)
T ss_dssp             STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH------------HHHTT
T ss_pred             cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHH------------HHhhc
Confidence                  22358899999999999899999999999999999999999997643211    100            00000


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      .  ...+......+.+++..||+.||++|||++++++  .+.+..
T Consensus       231 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          231 E--YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             c--CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            0  1122233456788899999999999999999997  455443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=6.3e-38  Score=343.68  Aligned_cols=237  Identities=26%  Similarity=0.324  Sum_probs=191.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..++||+|+||.||+|....++..||||++..    .......+.+|+.++++++||||++++++|.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            3578889999999999999999999999999998864    233456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|..++.....    +++..+..++.|++.||+|||+.  .+|+||||||+||||+.++.+||.|..      
T Consensus       227 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999976543    89999999999999999999952  789999999999999999999998832      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......    .+...+            ...
T Consensus       301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i------------~~~  364 (446)
T 4ejn_A          301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI------------LME  364 (446)
T ss_dssp             C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHC
T ss_pred             CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHH------------HhC
Confidence                  2346899999999999999999999999999999999999999764321    111111            011


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      .  ..++......+.+++..||+.||.+||     +++|+++
T Consensus       365 ~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          365 E--IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             C--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             C--CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            1  122333456678899999999999999     9999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.5e-38  Score=329.83  Aligned_cols=243  Identities=23%  Similarity=0.268  Sum_probs=192.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----e
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----E  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~  418 (645)
                      .++|+..+.||+|+||.||+|....++..||||++....    .....+.+|+.++.+++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            467899999999999999999998899999999987632    23457889999999999999999999987654    3


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc-
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT-  497 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~-  497 (645)
                      .++||||+++++|.+++.....    +++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||.|... 
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             cEEEEecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence            5999999999999999976543    8999999999999999999999   9999999999999999999999987321 


Q ss_pred             --------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          498 --------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       498 --------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                    ...||+.|+|||.+.+..++.++||||||+++|||++|+.||........       .........
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~~  236 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-------AYQHVREDP  236 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------HHHHHHCCC
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhcCCC
Confidence                          13589999999999999999999999999999999999999976432111       111111110


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHc
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ-ILN  610 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~-~L~  610 (645)
                      ...   ...    .......+.+++..||+.||++||++.++++ .|.
T Consensus       237 ~~~---~~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  277 (311)
T 3ork_A          237 IPP---SAR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  277 (311)
T ss_dssp             CCH---HHH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCc---ccc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence            000   000    1113456788899999999999997665543 443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.2e-37  Score=328.23  Aligned_cols=241  Identities=22%  Similarity=0.320  Sum_probs=200.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|...+.||+|+||.||++....++..+|+|.+...    ....+.+.+|+.++++++|+||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            5678889999999999999999999999999987652    234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++++|.+++.....    +++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+||.|..       
T Consensus       121 e~~~~~~L~~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKA----LTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             CCCTTCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ecCCCCCHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            99999999999876543    8999999999999999999999   999999999999999999999998732       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ....||..|+|||.+.+..++.++||||||+++|||++|+.||.......    ....            .....
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~------------~~~~~  257 (335)
T 2owb_A          194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLR------------IKKNE  257 (335)
T ss_dssp             TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHH------------HHHTC
T ss_pred             CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HHHH------------HhcCC
Confidence                 22458999999999999999999999999999999999999997643211    1100            00000


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                        ...+......+.+++..||+.||++|||++++++  .+....
T Consensus       258 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          258 --YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             --CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence              1122233456778899999999999999999997  565543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.2e-37  Score=321.10  Aligned_cols=236  Identities=22%  Similarity=0.349  Sum_probs=191.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELLL  421 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~l  421 (645)
                      .|...+.||+|+||.||+|....++..||+|.+..   .....+.+.+|+.++++++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            36677889999999999999999999999998765   33445679999999999999999999998865    356899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEc-CCCCeeeeccc--
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLD-ANFNARLESSF--  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld-~~~~~kl~d~~--  496 (645)
                      ||||+++++|.+++.....    +++..++.++.|++.||+|||+   .+  ++||||||+|||++ .++.+++.|..  
T Consensus       107 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             EEEecCCCCHHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            9999999999999976543    8999999999999999999998   77  99999999999998 78899998732  


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....||+.|+|||.+. +.++.++||||||+++|||++|+.||.......   ......    ..+..    
T Consensus       180 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~----~~~~~----  247 (290)
T 1t4h_A          180 TLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYRRV----TSGVK----  247 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHHHH----TTTCC----
T ss_pred             ccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH---HHHHHH----hccCC----
Confidence                    2346899999999887 459999999999999999999999997643211   111111    11000    


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ....+......+.+++..||+.||.+|||++++++
T Consensus       248 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          248 ----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                00111122346888999999999999999999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=319.88  Aligned_cols=240  Identities=24%  Similarity=0.365  Sum_probs=194.5

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      +|....+||+|+||.||+|....++..||+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            345566899999999999999888999999988763 3446779999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-CCCeeeeccc----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-NFNARLESSF----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-~~~~kl~d~~----------  496 (645)
                      +++|.+++..... ...+++..+..++.|++.||+|||+   .+++||||||+||+++. ++.+++.|..          
T Consensus       103 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          103 GGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             EEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            9999999976532 2346789999999999999999999   99999999999999987 8899998732          


Q ss_pred             --cccccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 --TLTAGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~--~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                        ....||..|+|||++....  ++.++||||||+++|||++|+.||........  ...             .......
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~-------------~~~~~~~  243 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--AMF-------------KVGMFKV  243 (295)
T ss_dssp             --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH--HHH-------------HHHHHCC
T ss_pred             cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH--HHH-------------hhccccc
Confidence              2236889999999997643  89999999999999999999999975432111  000             0001111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ....+......+.+++..||+.||++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            22334445567888999999999999999999986

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=332.50  Aligned_cols=260  Identities=20%  Similarity=0.281  Sum_probs=191.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee-----CCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE-----KGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-----~~~~~l  421 (645)
                      .++|+..+.||+|+||.||+|...  +..||||++............|+..+..++|+||+++++++..     ....++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEEC--CeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            367888999999999999999874  7999999987543332223344444556899999999985432     336799


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC---------CeeeCCCCCCcEEEcCCCCeee
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ---------QVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~---------~ivHrDlkp~NIlld~~~~~kl  492 (645)
                      ||||+++|+|.+++....     .++..++.++.|+++||+|||+   .         +|+||||||+||||+.++.+||
T Consensus        90 v~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             EEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEE
Confidence            999999999999997543     6899999999999999999998   6         9999999999999999999999


Q ss_pred             ecccc--------------------ccccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHcCCCCCCccccc
Q 041096          493 ESSFT--------------------LTAGTMGYLAPEYLQY-------GTATEKTDVFSYGVVVLEVACGRRPIERETEG  545 (645)
Q Consensus       493 ~d~~~--------------------~~~gt~~y~APE~~~~-------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~  545 (645)
                      +|...                    ...||+.|+|||++.+       ..++.++|||||||++|||++|+.|+......
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            87321                    2258999999999986       35677999999999999999998876543322


Q ss_pred             cchhhHHH-HHHhhhccCchhHHh-hhhccCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          546 HKMVNLVD-WVWGLYAEGRIIEAA-DKRLNGAF------NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       546 ~~~~~l~~-~~~~~~~~~~~~~~~-d~~l~~~~------~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ........ ..............+ ....+..+      .......+.+++..||+.||++|||++|+++.|+.+...-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            21111110 000000000000001 11111111      2246678999999999999999999999999998765443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5e-38  Score=329.71  Aligned_cols=260  Identities=20%  Similarity=0.259  Sum_probs=196.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|...+.||+|+||.||+|....++..||+|++....  .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57888999999999999999999889999999887532  2233567899999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      ++ |+|.+++.....   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|..         
T Consensus        82 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  154 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT  154 (324)
T ss_dssp             CS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred             cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence            96 699999876543   38999999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh---
Q 041096          497 ---TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD---  569 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d---  569 (645)
                         ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.... .............   
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL-GTPTEETWPGILSNEE  233 (324)
T ss_dssp             --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCHH
T ss_pred             cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChHhchhhhcchh
Confidence               22367999999999876 568999999999999999999999998654322211111110 0000000000000   


Q ss_pred             ------hhccCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCC
Q 041096          570 ------KRLNGA----FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEP  615 (645)
Q Consensus       570 ------~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~  615 (645)
                            +.....    ........+.+++..||+.||++|||++|+++  .+.+..+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence                  000000    00112356778999999999999999999988  56655443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=330.52  Aligned_cols=255  Identities=25%  Similarity=0.367  Sum_probs=202.3

Q ss_pred             cccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeee
Q 041096          336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCA  414 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~  414 (645)
                      ..+++.++....++|+..+.||+|+||.||+|....++..||||++.......+.+.+|+.++.++ +||||+++++++.
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            344555666678899999999999999999999988899999999887666678899999999999 7999999999997


Q ss_pred             e------CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC
Q 041096          415 E------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF  488 (645)
Q Consensus       415 ~------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~  488 (645)
                      .      .+..++||||+++++|.+++....  ...+++..+..++.|++.||+|||+   .+++||||||+|||++.++
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~  166 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENA  166 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTC
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCC
Confidence            7      468999999999999999998653  2348999999999999999999999   9999999999999999999


Q ss_pred             Ceeeeccc------------cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          489 NARLESSF------------TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       489 ~~kl~d~~------------~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                      .+++.|..            ....||+.|+|||.+.     ...++.++|||||||++|||++|+.||.......    .
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~  242 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----A  242 (326)
T ss_dssp             CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----H
T ss_pred             CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH----H
Confidence            99998732            1235899999999987     5678999999999999999999999997543211    1


Q ss_pred             HHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       552 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ...   .         ................+.+++..||+.||.+||+++++++  .+.+
T Consensus       243 ~~~---~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          243 LFL---I---------PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             HHH---H---------HHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred             HHH---h---------hcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence            100   0         0000001111223456788899999999999999999987  4543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.1e-38  Score=337.73  Aligned_cols=232  Identities=24%  Similarity=0.318  Sum_probs=186.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHH-HhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSI-IACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..++||+|+||.||+|+...++..||+|++....    .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            56888999999999999999999999999999986532    234456677776 5778999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..      
T Consensus       118 ~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERC----FLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            999999999999986543    8899999999999999999999   999999999999999999999998722      


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+...    +..            .++..
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~------------~i~~~  254 (373)
T 2r5t_A          191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYD------------NILNK  254 (373)
T ss_dssp             CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----HHH------------HHHHS
T ss_pred             cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----HHH------------HHHhc
Confidence                  23468999999999999999999999999999999999999997643211    111            11111


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      .+  .++......+.+++..||+.||.+||++.+
T Consensus       255 ~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          255 PL--QLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             cc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            11  122334456788889999999999999853

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.6e-37  Score=325.82  Aligned_cols=253  Identities=23%  Similarity=0.364  Sum_probs=201.6

Q ss_pred             HHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhh--cCCCCeeeeeeeeeeCC
Q 041096          340 YRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC--LRHKNLVQLLGWCAEKG  417 (645)
Q Consensus       340 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~  417 (645)
                      ...-....++|...+.||+|+||.||+|...  +..||||++..  .....+.+|++++..  ++||||+++++++...+
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~--~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECG--GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCc--hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            3333455678999999999999999999984  89999999864  334567889988887  78999999999998876


Q ss_pred             ----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeeeCCCCCCcEEEc
Q 041096          418 ----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH--------QECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NIlld  485 (645)
                          ..++||||+++|+|.+++.+..     +++.+++.++.|++.||+|||        +   .+|+||||||+||||+
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~  181 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVK  181 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEEC
T ss_pred             CccceeEEEEeecCCCcHHHHHhccC-----ccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEEC
Confidence                7999999999999999997542     899999999999999999999        6   8999999999999999


Q ss_pred             CCCCeeeeccc----------------cccccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcC--------
Q 041096          486 ANFNARLESSF----------------TLTAGTMGYLAPEYLQYGT------ATEKTDVFSYGVVVLEVACG--------  535 (645)
Q Consensus       486 ~~~~~kl~d~~----------------~~~~gt~~y~APE~~~~~~------~t~ksDV~SfGvvl~El~tG--------  535 (645)
                      .++.+||.|..                ....||+.|+|||.+.+..      ++.++|||||||++|||++|        
T Consensus       182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~  261 (342)
T 1b6c_B          182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  261 (342)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred             CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence            99999998722                2236899999999998753      34789999999999999999        


Q ss_pred             --CCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          536 --RRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       536 --~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        +.||...........  .+. ..        .....+....     ..+....+.+++..||+.||++|||+++|++.
T Consensus       262 ~~~~p~~~~~~~~~~~~--~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          262 DYQLPYYDLVPSDPSVE--EMR-KV--------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCTTTTTSCSSCCHH--HHH-HH--------HTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             ccccCccccCcCcccHH--HHH-HH--------HHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence              678765432221111  111 00        1111112222     23677889999999999999999999999999


Q ss_pred             HcCCCCC
Q 041096          609 LNNEAEP  615 (645)
Q Consensus       609 L~~~~~~  615 (645)
                      |+.+.+.
T Consensus       331 L~~i~~~  337 (342)
T 1b6c_B          331 LSQLSQQ  337 (342)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            9876543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.4e-38  Score=331.54  Aligned_cols=237  Identities=19%  Similarity=0.302  Sum_probs=192.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCC--CCeeeeeeeeeeCCeEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRH--KNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~l  421 (645)
                      .++|+..+.||+|+||.||++... ++..||||++...   ....+.+.+|+.++.+++|  +||+++++++.+.+..++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            356888999999999999999885 4889999988653   2334678999999999987  999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||| +.+++|.+++....    .+++.++..++.|++.||+|||+   .+|+||||||+||||+ ++.+||.|..     
T Consensus        87 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EEC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EEe-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            999 45889999998754    38999999999999999999999   9999999999999997 5678988732     


Q ss_pred             ---------cccccCCcccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQY-----------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~-----------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                               ....||+.|+|||++.+           ..++.++|||||||++|||++|+.||......      ..   
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~---  228 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------IS---  228 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HH---
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------HH---
Confidence                     13468999999999864           67899999999999999999999999753221      00   


Q ss_pred             hhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       557 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                            .+...+++.....++......+.+++..||+.||.+|||+.++++.
T Consensus       229 ------~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          229 ------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             ------HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence                  1122333333334444445678889999999999999999999873

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.5e-38  Score=328.44  Aligned_cols=254  Identities=25%  Similarity=0.381  Sum_probs=201.1

Q ss_pred             cCCCcCceeccCCceEEEEEEE----CCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC--eEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF----ASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG--ELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~  420 (645)
                      ++|+..+.||+|+||.||+|.+    ..++..||||++... ....+.+.+|++++++++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4678889999999999999984    457899999998764 344578999999999999999999999987654  689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+++++|.+++.....   .+++.+++.++.|+++||+|||+   .+++||||||+|||++.++.+|+.|..    
T Consensus       121 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            99999999999999986543   38999999999999999999999   999999999999999999999998722    


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh----cc
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY----AE  561 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~----~~  561 (645)
                                 ....++..|+|||.+.+..++.++||||||+++|||++|+.|+.....     ...+......    ..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~  269 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-----EFMRMIGNDKQGQMIV  269 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH-----HHHHHHCTTCCTHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH-----HHHHhhccccchhhhH
Confidence                       112456679999999988899999999999999999999999764311     0000000000    00


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ..+.+.+........+...+..+.+++..||+.||++|||++++++.|+.+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          270 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            012222222222233445667889999999999999999999999999865

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.5e-37  Score=332.37  Aligned_cols=253  Identities=20%  Similarity=0.255  Sum_probs=200.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC--------CCCeeeeeeeee----
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR--------HKNLVQLLGWCA----  414 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~--------H~niv~l~g~~~----  414 (645)
                      .++|+..++||+|+||+||+|....++..||||++.......+.+.+|++++++++        |+||+++++++.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            36799999999999999999999999999999999877666788999999999996        788999999987    


Q ss_pred             eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCC-----
Q 041096          415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANF-----  488 (645)
Q Consensus       415 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~-----  488 (645)
                      +....++||||+ +++|.+++.....  ..+++..++.++.||+.||+|||+   + +|+||||||+||||+.++     
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhh
Confidence            456899999999 6677777665432  248999999999999999999999   7 999999999999999775     


Q ss_pred             --------------------------------------------Ceeeeccc---------cccccCCcccCcccccCCC
Q 041096          489 --------------------------------------------NARLESSF---------TLTAGTMGYLAPEYLQYGT  515 (645)
Q Consensus       489 --------------------------------------------~~kl~d~~---------~~~~gt~~y~APE~~~~~~  515 (645)
                                                                  .+|+.|..         ....||+.|+|||++.+..
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~  269 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG  269 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence                                                        68887732         3346899999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCccccccchh--hHHHHHHhhhccC------------------------------c
Q 041096          516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV--NLVDWVWGLYAEG------------------------------R  563 (645)
Q Consensus       516 ~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~--~l~~~~~~~~~~~------------------------------~  563 (645)
                      ++.++|||||||++|||++|+.||..........  .............                              .
T Consensus       270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence            9999999999999999999999997654322111  1111111111000                              0


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+.+...  ...+.+....+.+++..||+.||++|||++|+++
T Consensus       350 ~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          350 LFEVLVEK--YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHT--SCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhHhhhhh--cccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            01111111  1346777889999999999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.7e-38  Score=332.10  Aligned_cols=254  Identities=23%  Similarity=0.283  Sum_probs=188.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcC-CCCeeeeeeeee--------eC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLR-HKNLVQLLGWCA--------EK  416 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~--------~~  416 (645)
                      ..+|+..++||+|+||.||+|....++..||||++.. .....+.+.+|+.++.++. ||||+++++++.        ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            3578889999999999999999988899999998755 3344667899999999996 999999999984        34


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEcCCCCeeeec
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                      ...++||||+. |+|.+++..... ...+++.+++.++.|++.||+|||+   .+  |+||||||+||||+.++.+||.|
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEec
Confidence            46899999995 899999875332 2349999999999999999999998   77  99999999999999999999988


Q ss_pred             ccc------------------------ccccCCcccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccc
Q 041096          495 SFT------------------------LTAGTMGYLAPEYL---QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHK  547 (645)
Q Consensus       495 ~~~------------------------~~~gt~~y~APE~~---~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~  547 (645)
                      ...                        ...||+.|+|||.+   .+..++.++|||||||++|||++|+.||....... 
T Consensus       182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-  260 (337)
T 3ll6_A          182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-  260 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence            321                        23489999999998   56678999999999999999999999996532211 


Q ss_pred             hhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCCCCCcc
Q 041096          548 MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCL  625 (645)
Q Consensus       548 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~~~~~~  625 (645)
                         +                +...............+.+++..||+.||.+|||++++++.|+........+...+..
T Consensus       261 ---~----------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~~~~~~  319 (337)
T 3ll6_A          261 ---I----------------VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPIT  319 (337)
T ss_dssp             ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCTTSCCH
T ss_pred             ---h----------------hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCCCccHH
Confidence               1                1111111111122344778899999999999999999999999876655555555443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.3e-37  Score=322.43  Aligned_cols=240  Identities=25%  Similarity=0.347  Sum_probs=194.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..+|+|.+... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            46788999999999999999999988999999988763 34567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....   .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+++.|..         
T Consensus        98 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           98 CPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             CTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999999876433   38999999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccc-----cCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 ---TLTAGTMGYLAPEYL-----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~-----~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                         ....||..|+|||++     ....++.++||||||+++|||++|+.||........   +....    ....     
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~----~~~~-----  239 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIA----KSDP-----  239 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHH----HSCC-----
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---HHHHh----ccCC-----
Confidence               234689999999998     467789999999999999999999999976432111   11100    0000     


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       +  ....+......+.+++..||+.||.+|||+.++++
T Consensus       240 -~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          240 -P--TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -C--CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -c--ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             0  00112233456888999999999999999999875

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.7e-37  Score=335.38  Aligned_cols=247  Identities=17%  Similarity=0.244  Sum_probs=189.8

Q ss_pred             cCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhh-cCCCCeeeeeeeeee----CCeEEE
Q 041096          348 RGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIAC-LRHKNLVQLLGWCAE----KGELLL  421 (645)
Q Consensus       348 ~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~----~~~~~l  421 (645)
                      ++|... ++||+|+||+||+|....++..||||++..    ...+.+|++++.+ .+||||+++++++..    .+.+||
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            456555 689999999999999999999999999864    2457788888754 589999999999875    567899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeeccc--
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESSF--  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~~--  496 (645)
                      ||||+++|+|.+++.....  ..+++.++..++.||+.||+|||+   .+|+||||||+||||+.   ++.+||+|..  
T Consensus       137 v~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccc
Confidence            9999999999999976432  348999999999999999999999   99999999999999998   7889998732  


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...............+..    +.    
T Consensus       212 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~----~~----  283 (400)
T 1nxk_A          212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM----GQ----  283 (400)
T ss_dssp             EECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH----TC----
T ss_pred             cccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc----Cc----
Confidence                     2346899999999999999999999999999999999999999765432211111111100    00    


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                        ..+...........+.+++..||+.||++|||+.++++  .+.+..
T Consensus       284 --~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          284 --YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             --CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             --ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence              00000001223456788999999999999999999998  355443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.7e-38  Score=331.48  Aligned_cols=253  Identities=21%  Similarity=0.332  Sum_probs=197.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++....   ...+.+.+|++++++++||||++++++|.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            57888899999999999999999999999999876532   234568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      |+++++|..++.....    +++..+..++.|++.||+|||+   .+++||||||+|||++.++.++|.|..        
T Consensus       105 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A          105 FVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             CCSEEHHHHHHHSTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             cCCcchHHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            9999999888764432    8999999999999999999999   999999999999999999999998732        


Q ss_pred             ----cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh-------hhccCch
Q 041096          497 ----TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG-------LYAEGRI  564 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~-------~~~~~~~  564 (645)
                          ....||..|+|||.+.+. .++.++|||||||++|||++|+.||...........+......       .+.....
T Consensus       178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence                224689999999999875 7899999999999999999999999775433222222111100       0000000


Q ss_pred             -hHHhhhhccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          565 -IEAADKRLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       565 -~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .....+.+....+     ......+.+++..||+.||++|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             0000000111111     123567889999999999999999999876

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5e-38  Score=323.29  Aligned_cols=242  Identities=25%  Similarity=0.324  Sum_probs=189.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc--h-hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--G-KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||.||+|....++..||+|++.....  . .+.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            4678889999999999999999988899999999876322  2 233445555688889999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      ||++ |+|.+++.........+++..++.++.|++.||+|||+   . +++||||||+|||++.++.+|+.|..      
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9996 69988887543334459999999999999999999998   7 99999999999999999999998732      


Q ss_pred             -----cccccCCcccCcccc----cCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 -----TLTAGTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~----~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                           ....||+.|+|||.+    ....++.++||||||+++|||++|+.||.......  ..+.             +.
T Consensus       162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~-------------~~  226 (290)
T 3fme_A          162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQLK-------------QV  226 (290)
T ss_dssp             --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--HHHH-------------HH
T ss_pred             ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH--HHHH-------------HH
Confidence                 223689999999996    55678999999999999999999999997532211  1111             11


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ................+.+++..||+.||++|||++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1111111112234556888999999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.1e-37  Score=323.52  Aligned_cols=245  Identities=23%  Similarity=0.353  Sum_probs=199.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|...+.||+|+||.||++....++..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            357888999999999999999999889999999987643 3446788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~------  496 (645)
                      +++++|.+++.....    +++..+..++.|++.||+|||+   .+++||||||+||++   +.++.+++.|..      
T Consensus        88 ~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           88 VSGGELFDRILERGV----YTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CCCccHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            999999999976543    8999999999999999999999   999999999999999   788889998732      


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||+.|+|||.+.+..++.++||||||+++|||++|+.||......    .+......    +.      ...
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~----~~------~~~  226 (304)
T 2jam_A          161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFEKIKE----GY------YEF  226 (304)
T ss_dssp             CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH----CC------CCC
T ss_pred             CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHc----CC------CCC
Confidence                1235899999999999999999999999999999999999999764321    11111100    00      000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ...........+.+++..||+.||++|||++++++  .+++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            11112234567888999999999999999999987  56544

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7e-38  Score=331.26  Aligned_cols=240  Identities=20%  Similarity=0.297  Sum_probs=193.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.....   ...+|++++.++ +||||+++++++.+.+..|+||||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            4678899999999999999999999999999999876432   356788898888 799999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-C---Ceeeeccc-----
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-F---NARLESSF-----  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~---~~kl~d~~-----  496 (645)
                      +++|+|.+++....    .+++..+..++.||+.||+|||+   .+|+||||||+|||+..+ +   ..|+.|..     
T Consensus        98 ~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           98 MKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             CCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            99999999997644    38999999999999999999999   999999999999998543 2   37887721     


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+...+    ..+.      
T Consensus       171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~i----~~~~------  239 (342)
T 2qr7_A          171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILARI----GSGK------  239 (342)
T ss_dssp             BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-HHHHHHHH----HHCC------
T ss_pred             cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-HHHHHHHH----ccCC------
Confidence                   23468999999999988889999999999999999999999997532211 11111111    0000      


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+...........+.+++..||+.||++|||+.++++
T Consensus       240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          240 FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            01111112234566788899999999999999999987

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.1e-37  Score=335.69  Aligned_cols=235  Identities=18%  Similarity=0.304  Sum_probs=191.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC--CCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR--HKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|.... +..||||++...   ....+.+.+|+.++.+++  |+||+++++++...+..+||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            358889999999999999999875 889999988653   334577999999999997  59999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      || +.+++|.+++....    .+++.++..++.||+.||+|||+   .+|+||||||+||||+ ++.+||.|..      
T Consensus       135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            99 56899999998654    38999999999999999999999   9999999999999996 5788998731      


Q ss_pred             --------cccccCCcccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQY-----------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-----------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                              ...+||+.|+|||++.+           ..++.++|||||||++|||++|+.||......      ..    
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~----  275 (390)
T 2zmd_A          206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------IS----  275 (390)
T ss_dssp             --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HH----
T ss_pred             CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH------HH----
Confidence                    23469999999999865           46899999999999999999999999753221      01    


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           .+...+++.....++......+.+++..||+.||.+|||+.|+++
T Consensus       276 -----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          276 -----KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             -----HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence                 112223333222333333556788999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.5e-37  Score=336.03  Aligned_cols=192  Identities=20%  Similarity=0.278  Sum_probs=171.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc------CCCCeeeeeeeeeeCCeEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL------RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l------~H~niv~l~g~~~~~~~~~  420 (645)
                      ..+|+..++||+|+||.||+|....++..||||++.......+.+.+|++++..+      +|+||+++++++...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            4578999999999999999999999999999999987766677888999998887      4679999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC--eeeeccc--
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN--ARLESSF--  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~--~kl~d~~--  496 (645)
                      +||||+. ++|.+++.....  ..+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.  +||.|..  
T Consensus       176 lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence            9999995 799999986543  238999999999999999999999   89999999999999999887  8998732  


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETE  544 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~  544 (645)
                             ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          250 CYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             EETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             eecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence                   234689999999999999999999999999999999999999987543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.3e-37  Score=336.38  Aligned_cols=238  Identities=21%  Similarity=0.279  Sum_probs=187.8

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---------chhHhHHHHHHHHhhcCCCCeeeeeeeeee
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---------EGKTEFLAELSIIACLRHKNLVQLLGWCAE  415 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~  415 (645)
                      ...++|...+.||+|+||.||+|....++..||||++....         .....+.+|++++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            45678999999999999999999999999999999876421         12345889999999999999999999975 


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceee
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARL  492 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl  492 (645)
                      .+..++||||+++|+|.+++....    .+++.++..++.|++.||+|||+   .+|+||||||+||||+.++   .+||
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             cCceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence            456899999999999999987543    38999999999999999999999   9999999999999997544   4888


Q ss_pred             eccc-----------cccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          493 ESSF-----------TLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       493 ~d~~-----------~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .|..           ....||+.|+|||++..   ..++.++|||||||++|||++|+.||.........   ....   
T Consensus       284 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~---~~~i---  357 (419)
T 3i6u_A          284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQI---  357 (419)
T ss_dssp             CCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH---HHHH---
T ss_pred             eecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH---HHHH---
Confidence            8732           23468999999999863   67889999999999999999999999764332211   1111   


Q ss_pred             hccCchhHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                ..... ....    .....+.+++..||+.||++|||++|+++
T Consensus       358 ----------~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          358 ----------TSGKY-NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             ----------HTTCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ----------hcCCC-CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                      11000 1111    12456888999999999999999999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.2e-37  Score=348.40  Aligned_cols=242  Identities=24%  Similarity=0.339  Sum_probs=201.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..++||+|+||.||+|....++..||+|++...    ......+.+|++++.+++||||+++++++.+.+..|+|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            35688899999999999999999999999999998652    23356688999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|.+++.....  ..+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..      
T Consensus       263 mEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence            999999999999976442  238999999999999999999999   999999999999999999999998721      


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                           ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+.              .
T Consensus       338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--------------~  403 (576)
T 2acx_A          338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--------------E  403 (576)
T ss_dssp             TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--------------H
T ss_pred             cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--------------c
Confidence                 235789999999999999999999999999999999999999986543221111111110              0


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      ....++......+.+++..||+.||.+||     +++|+++
T Consensus       404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            11223334456788899999999999999     7888875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.2e-37  Score=327.34  Aligned_cols=251  Identities=20%  Similarity=0.309  Sum_probs=201.7

Q ss_pred             cCHHHHHHHhcCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC-CCCeeeeeee
Q 041096          338 FSYRELRSATRGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR-HKNLVQLLGW  412 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~g~  412 (645)
                      ..++......+.|... +.||+|+||.||+|....++..||+|++...   ......+.+|+.++.+++ ||||++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3344445556677776 8899999999999999999999999988762   334678999999999995 6999999999


Q ss_pred             eeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCC
Q 041096          413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFN  489 (645)
Q Consensus       413 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~  489 (645)
                      +.+.+..++||||+++|+|.+++....  ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++.   ++.
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~  172 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGD  172 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCC
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCc
Confidence            999999999999999999999986532  2348999999999999999999999   99999999999999998   788


Q ss_pred             eeeeccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          490 ARLESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       490 ~kl~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      +||.|..           ....||+.|+|||++.+..++.++||||||+++|||++|+.||...........+.    . 
T Consensus       173 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~-  247 (327)
T 3lm5_A          173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS----Q-  247 (327)
T ss_dssp             EEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----H-
T ss_pred             EEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH----h-
Confidence            9998732           22468999999999999999999999999999999999999997643221111000    0 


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                               ................+.+++..||+.||++|||++++++
T Consensus       248 ---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          248 ---------VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             ---------TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ---------cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence                     0011111122234566888999999999999999999987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.2e-37  Score=316.31  Aligned_cols=242  Identities=21%  Similarity=0.344  Sum_probs=193.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|...+.||+|+||.||+|....++..||||.+...    ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            35788899999999999999999888999999988652    22345788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++++|.+++.....    +++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|..      
T Consensus        90 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGR----VEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             EECCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             EeccCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            999999999999976543    8999999999999999999999   899999999999999999999998732      


Q ss_pred             -----cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....|++.|+|||.+.+..+ +.++||||||+++|||++|+.||......    .+.+.+             ..
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~-------------~~  225 (276)
T 2h6d_A          163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----TLFKKI-------------RG  225 (276)
T ss_dssp             C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH-------------HH
T ss_pred             CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHh-------------hc
Confidence                 22357899999999987765 68999999999999999999999753221    111111             11


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      .. ...+......+.+++..||+.||.+|||++++++  .+++..
T Consensus       226 ~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          226 GV-FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             CC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             Cc-ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            10 1122233456788999999999999999999998  355443

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-37  Score=329.80  Aligned_cols=241  Identities=22%  Similarity=0.266  Sum_probs=196.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC---CCCeEEEEEeccCC-----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA---SSGSVAAVKRSKHS-----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      .++|+..+.||+|+||.||++...   .++..||||++...     ....+.+.+|++++.++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            357889999999999999999984   47899999998752     23356688999999999 6999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..+|||||+++|+|.+++.....    +++..+..++.|+++||+|||+   .+|+||||||+||||+.++.+||.|.. 
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~  205 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRER----FTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL  205 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred             eEEEEeecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence            99999999999999999986543    8999999999999999999999   999999999999999999999998732 


Q ss_pred             ------------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          497 ------------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                  ....||+.|+|||++.+  ..++.++|||||||++|||++|+.||...........+.....      
T Consensus       206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~------  279 (355)
T 1vzo_A          206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL------  279 (355)
T ss_dssp             EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH------
T ss_pred             CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh------
Confidence                        12368999999999986  3478999999999999999999999976443322222211110      


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQI  608 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~~  608 (645)
                            .  ....++.+....+.+++..||+.||.+||     +++++++.
T Consensus       280 ------~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          280 ------K--SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             ------H--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ------c--cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence                  0  01223344456788899999999999999     99999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=7.2e-37  Score=317.18  Aligned_cols=245  Identities=24%  Similarity=0.331  Sum_probs=195.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-----cchhHhHHHHHHHHhhcCCCCeeeeeeeee--eCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRHKNLVQLLGWCA--EKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~--~~~~~  419 (645)
                      .++|...+.||+|+||.||++....++..+|+|++...     ....+.+.+|++++++++|+||+++++++.  +.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            47899999999999999999999988999999998653     234577999999999999999999999984  45688


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ++||||++++ |.+++.....  ..+++..+..++.|+++||+|||+   .+++||||||+|||++.++..++.|..   
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccc
Confidence            9999999876 7777765432  348999999999999999999999   999999999999999999999998722   


Q ss_pred             -----------cccccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGT--ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~--~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                 ....||..|+|||.+.+..  ++.++||||||+++|||++|+.||......    .+...         
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~---------  224 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY----KLFEN---------  224 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHH---------
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHHH---------
Confidence                       1235899999999998654  378999999999999999999999764321    11111         


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCC
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEP  615 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~  615 (645)
                          +... ....+.+....+.+++..||+.||.+|||++++++  .+.+....
T Consensus       225 ----i~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          225 ----IGKG-SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             ----HHHC-CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             ----HhcC-CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence                0000 01223334567788999999999999999999997  56655443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1e-36  Score=325.26  Aligned_cols=241  Identities=24%  Similarity=0.359  Sum_probs=197.3

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------hhHhHHHHHHHHhhc-CCCCeeeeee
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------GKTEFLAELSIIACL-RHKNLVQLLG  411 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------~~~~~~~Ei~~l~~l-~H~niv~l~g  411 (645)
                      ......++|...+.||+|+||.||+|.+..+|..||||++.....         ..+.+.+|+.++.++ +||||+++++
T Consensus        88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            334556789999999999999999999988899999998765321         145678999999999 7999999999


Q ss_pred             eeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       412 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      ++...+..++||||+++++|.+++.....    +++..+..++.||+.||.|||+   .+++||||||+|||++.++.++
T Consensus       168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          168 SYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEEBSSEEEEEECCCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEE
T ss_pred             EEeeCCEEEEEEEeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEE
Confidence            99999999999999999999999976543    8999999999999999999999   9999999999999999999999


Q ss_pred             eeccc-----------cccccCCcccCcccccC------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          492 LESSF-----------TLTAGTMGYLAPEYLQY------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       492 l~d~~-----------~~~~gt~~y~APE~~~~------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                      +.|..           ....||+.|+|||++.+      ..++.++|||||||++|||++|+.||......    .....
T Consensus       241 l~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~  316 (365)
T 2y7j_A          241 LSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----LMLRM  316 (365)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH
T ss_pred             EEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----HHHHH
Confidence            98732           23468999999999863      35789999999999999999999999754321    11111


Q ss_pred             HHhhhccCchhHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +..            ...  ..+.    .....+.+++..||+.||++|||++++++
T Consensus       317 i~~------------~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          317 IME------------GQY--QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHH------------TCC--CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHh------------CCC--CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            100            000  0111    12345788999999999999999999987

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.6e-37  Score=336.93  Aligned_cols=251  Identities=21%  Similarity=0.215  Sum_probs=193.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~  417 (645)
                      .++|+..+.||+|+||+||+|....++..||||++...   ....+.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46899999999999999999999999999999998753   33456788999999999999999999998654      4


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..||||||+++ +|.+.+..      .+++.++..++.|++.||+|||+   .+|+||||||+||||+.++.+||.|.. 
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence            68999999965 57666642      28999999999999999999999   999999999999999999999998832 


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----hc--
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----YA--  560 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~~--  560 (645)
                                ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+++....-    +.  
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~  290 (464)
T 3ttj_A          211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  290 (464)
T ss_dssp             C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred             eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence                      33578999999999999999999999999999999999999998654322221111110000    00  


Q ss_pred             ---------------cCchhHHhhhhccCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 ---------------EGRIIEAADKRLNGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 ---------------~~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                     ...........+....   .......+.+++..||+.||++|||++|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                           0000000000000000   0112567889999999999999999999987

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.9e-38  Score=336.00  Aligned_cols=253  Identities=20%  Similarity=0.255  Sum_probs=192.4

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee--------
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE--------  415 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--------  415 (645)
                      ....++|...+.||+|+||.||+|....++..||||++....   ....+|+++++.++||||+++++++..        
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~   79 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP   79 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence            455678999999999999999999999999999999886532   233479999999999999999999844        


Q ss_pred             ------------------------------CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHh
Q 041096          416 ------------------------------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH  465 (645)
Q Consensus       416 ------------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH  465 (645)
                                                    ....++||||++ |+|.+.+......+..+++..+..++.|+++||+|||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                          334899999997 6888888754333445999999999999999999999


Q ss_pred             hcCCCCeeeCCCCCCcEEEc-CCCCeeeeccc-----------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHH
Q 041096          466 QECEQQVIHRDIKASNIMLD-ANFNARLESSF-----------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEV  532 (645)
Q Consensus       466 ~~~~~~ivHrDlkp~NIlld-~~~~~kl~d~~-----------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El  532 (645)
                      +   .+|+||||||+|||++ .++.+||.|..           ....||+.|+|||.+.+. .++.++||||+||++|||
T Consensus       159 ~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          159 S---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             T---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             H---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence            8   9999999999999998 57889998732           224678999999998865 489999999999999999


Q ss_pred             HcCCCCCCccccccchhhHHHHHHhhhccCchhHH--hhhh-------------ccCCCCHHHHHHHHHHHHHccCCCCC
Q 041096          533 ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA--ADKR-------------LNGAFNEDEMKRLLLVGLSCANPDSS  597 (645)
Q Consensus       533 ~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~d~~-------------l~~~~~~~~~~~l~~l~~~Cl~~dP~  597 (645)
                      ++|+.||......+....++..    .......++  +++.             ....++......+.+++..||+.||+
T Consensus       236 l~g~~pf~~~~~~~~~~~i~~~----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  311 (383)
T 3eb0_A          236 ILGKPLFSGETSIDQLVRIIQI----MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD  311 (383)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHH----HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred             HhCCCCCCCCChHHHHHHHHHH----hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence            9999999875432222222111    111000000  0000             00012223455688999999999999


Q ss_pred             CCCCHHHHHH
Q 041096          598 ARPSMRRVFQ  607 (645)
Q Consensus       598 ~RPt~~~vl~  607 (645)
                      +|||+.|+++
T Consensus       312 ~R~t~~e~l~  321 (383)
T 3eb0_A          312 LRINPYEAMA  321 (383)
T ss_dssp             GSCCHHHHHT
T ss_pred             hCCCHHHHhc
Confidence            9999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=4.4e-37  Score=320.33  Aligned_cols=240  Identities=25%  Similarity=0.338  Sum_probs=193.6

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|+..+.||+|+||.||+|....++..||+|.+.... ..+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            3467999999999999999999999889999999987633 456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      +++++|.+++.....   .+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+++.|..         
T Consensus       106 ~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          106 CGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             CTTEEHHHHHHHHTC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             CCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            999999999974332   38999999999999999999999   999999999999999999999998732         


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||..|+|||.+.+..++.++||||||+++|||++|+.||........    .   ......      ..+.+ 
T Consensus       180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~---~~~~~~------~~~~~-  245 (314)
T 3com_A          180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA----I---FMIPTN------PPPTF-  245 (314)
T ss_dssp             SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----H---HHHHHS------CCCCC-
T ss_pred             cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH----H---HHHhcC------CCccc-
Confidence               224688999999999999999999999999999999999999975432110    0   000000      00000 


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       ..+......+.+++..||+.||.+|||+.++++
T Consensus       246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence             112223456888999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.2e-38  Score=332.78  Aligned_cols=256  Identities=16%  Similarity=0.143  Sum_probs=199.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECC--------CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeee-----------
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS--------SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQ-----------  408 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~--------~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~-----------  408 (645)
                      ++|...+.||+|+||.||+|....        .+..||+|++...    +.+.+|++++++++||||++           
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence            678889999999999999999976        3789999998754    46889999999999999998           


Q ss_pred             ----eeeeeee-CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          409 ----LLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       409 ----l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                          +++++.. .+..++||||+ +++|.+++....  ...+++.+++.++.||+.||+|||+   .+|+||||||+|||
T Consensus       118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl  191 (352)
T 2jii_A          118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF  191 (352)
T ss_dssp             SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred             CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence                5667765 67899999999 999999998652  2349999999999999999999999   99999999999999


Q ss_pred             EcCCC--Ceeeeccc-------------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 041096          484 LDANF--NARLESSF-------------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERE  542 (645)
Q Consensus       484 ld~~~--~~kl~d~~-------------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~  542 (645)
                      ++.++  .+||.|..                   ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            99988  88887722                   1236899999999999999999999999999999999999999865


Q ss_pred             ccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCCCCC
Q 041096          543 TEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK  620 (645)
Q Consensus       543 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~~p~  620 (645)
                      ....  ..+...........  ....+...   ........+.+++..||+.||++||+++++++.|+++........
T Consensus       272 ~~~~--~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~  342 (352)
T 2jii_A          272 LPNT--EDIMKQKQKFVDKP--GPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP  342 (352)
T ss_dssp             TTCH--HHHHHHHHHHHHSC--CCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred             CcCH--HHHHHHHHhccCCh--hhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence            3211  11111111110000  00000000   001224668888999999999999999999999987765554443

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.4e-37  Score=326.59  Aligned_cols=261  Identities=18%  Similarity=0.245  Sum_probs=194.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~  417 (645)
                      .++|+..+.||+|+||.||+|....++..||||++...   ....+.+.+|++++++++||||+++++++...      .
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788899999999999999999989999999998653   23356788999999999999999999998765      3


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--  495 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--  495 (645)
                      ..|+||||+ +++|.+++...     .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++.+||.|.  
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~  174 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL  174 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeec
Confidence            569999999 88999999763     28999999999999999999999   99999999999999999999999873  


Q ss_pred             -------ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-------hhhc
Q 041096          496 -------FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-------GLYA  560 (645)
Q Consensus       496 -------~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-------~~~~  560 (645)
                             ....+||+.|+|||++.+ ..++.++||||+||+++||++|+.||...+.......+.....       ....
T Consensus       175 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          175 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             ccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence                   233578999999999887 6799999999999999999999999986543222111111100       0000


Q ss_pred             cCchhHHhhh--hc-c---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          561 EGRIIEAADK--RL-N---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       561 ~~~~~~~~d~--~l-~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                      .......+..  .. .   ..........+.+++..|++.||++|||++++++  .+++..+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE  318 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCc
Confidence            0000000000  00 0   0111233456788999999999999999999998  566654443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5e-37  Score=317.31  Aligned_cols=241  Identities=23%  Similarity=0.306  Sum_probs=196.9

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----------chhHhHHHHHHHHhhcC-CCCeeeeeeeee
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----------EGKTEFLAELSIIACLR-HKNLVQLLGWCA  414 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----------~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~  414 (645)
                      ..++|+..+.||+|+||.||+|....++..||||++....          ...+.+.+|++++.+++ ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            3578999999999999999999999899999999986532          22456889999999996 999999999999


Q ss_pred             eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          415 EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       415 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                      ..+..++||||+++++|.+++.....    +++..+..++.|++.||+|||+   .+++||||||+||+++.++.+++.|
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEec
Confidence            99999999999999999999986533    8999999999999999999999   9999999999999999999999987


Q ss_pred             cc-----------cccccCCcccCccccc------CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh
Q 041096          495 SF-----------TLTAGTMGYLAPEYLQ------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG  557 (645)
Q Consensus       495 ~~-----------~~~~gt~~y~APE~~~------~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~  557 (645)
                      ..           ....|++.|+|||.+.      ...++.++||||||+++|||++|+.||.......    .......
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~  243 (298)
T 1phk_A          168 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML----MLRMIMS  243 (298)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHH
T ss_pred             ccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH----HHHHHhc
Confidence            32           2246899999999885      4568999999999999999999999997543211    1110000


Q ss_pred             hhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       558 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          +.      ..............+.+++..||+.||++|||+.++++
T Consensus       244 ----~~------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          244 ----GN------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             ----TC------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ----CC------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                00      00000111234567889999999999999999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=8.1e-37  Score=340.07  Aligned_cols=240  Identities=26%  Similarity=0.390  Sum_probs=195.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc--------------chhHhHHHHHHHHhhcCCCCeeeeeee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--------------EGKTEFLAELSIIACLRHKNLVQLLGW  412 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--------------~~~~~~~~Ei~~l~~l~H~niv~l~g~  412 (645)
                      .++|...++||+|+||+||+|....++..+|+|++....              ...+.+.+|+.++++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            467888999999999999999999999999999886532              335678999999999999999999999


Q ss_pred             eeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---C
Q 041096          413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---N  489 (645)
Q Consensus       413 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~  489 (645)
                      |.+.+..++||||+++|+|.+++.....    +++..+..++.||+.||+|||+   .+|+||||||+|||++.++   .
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSS
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCcc
Confidence            9999999999999999999999976543    8999999999999999999999   9999999999999998776   5


Q ss_pred             eeeecc-----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          490 ARLESS-----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       490 ~kl~d~-----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      +||.|.           .....||+.|+|||++. +.++.++||||+||++|||++|+.||.......    +...+.  
T Consensus       188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~--  260 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD----IIKKVE--  260 (504)
T ss_dssp             EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHH--
T ss_pred             EEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHH--
Confidence            788772           23346999999999987 569999999999999999999999997643211    111110  


Q ss_pred             hccCchhHHhhhhccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          559 YAEGRIIEAADKRLNGAFNE----DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                        .+        ..  .++.    .....+.+++..||+.||.+|||++|+++  .+++.
T Consensus       261 --~~--------~~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          261 --KG--------KY--YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             --HC--------CC--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             --cC--------CC--CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence              00        00  1111    12356788999999999999999999986  45543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2e-38  Score=339.84  Aligned_cols=234  Identities=14%  Similarity=0.140  Sum_probs=183.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC----CcchhHhHHHHH---HHHhhcCCCCeeeee-------ee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH----SHEGKTEFLAEL---SIIACLRHKNLVQLL-------GW  412 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~Ei---~~l~~l~H~niv~l~-------g~  412 (645)
                      .++|...+.||+|+||.||+|+...++..||||++..    .....+.+.+|+   +++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            4668888999999999999999988899999999863    233457789999   555566899999998       55


Q ss_pred             eeeCC-----------------eEEEEEecCCCCCHhHHhhhcCC---CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 041096          413 CAEKG-----------------ELLLVYEYMPNGSLDRMLYQDSE---NGVLLSWYHRLNIVVGLASALTYLHQECEQQV  472 (645)
Q Consensus       413 ~~~~~-----------------~~~lV~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  472 (645)
                      +.+.+                 ..+|||||+ +|+|.+++.....   ....+++..++.|+.||++||+|||+   .+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            44442                 289999999 7899999986432   12235578999999999999999999   999


Q ss_pred             eeCCCCCCcEEEcCCCCeeeeccc---------cccccCCcccCcccccCC-----------CCCcchhHHHHHHHHHHH
Q 041096          473 IHRDIKASNIMLDANFNARLESSF---------TLTAGTMGYLAPEYLQYG-----------TATEKTDVFSYGVVVLEV  532 (645)
Q Consensus       473 vHrDlkp~NIlld~~~~~kl~d~~---------~~~~gt~~y~APE~~~~~-----------~~t~ksDV~SfGvvl~El  532 (645)
                      +||||||+||||+.++.+||+|..         ....| +.|+|||++.+.           .++.++|||||||++|||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el  306 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI  306 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence            999999999999999999998832         23457 999999999887           899999999999999999


Q ss_pred             HcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          533 ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       533 ~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ++|+.||..........                 .+.+.     .......+.+++..||+.||++|||+.++++
T Consensus       307 ltg~~Pf~~~~~~~~~~-----------------~~~~~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          307 WCADLPITKDAALGGSE-----------------WIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHSSCCC------CCSG-----------------GGGSS-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHCCCCCcccccccchh-----------------hhhhh-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999997643221111                 00000     0122456788889999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.5e-36  Score=324.05  Aligned_cols=263  Identities=19%  Similarity=0.249  Sum_probs=203.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-----------CCCeeeeeeeeee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-----------HKNLVQLLGWCAE  415 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-----------H~niv~l~g~~~~  415 (645)
                      .++|...+.||+|+||.||+|....++..||||++.......+.+.+|++++.+++           |+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            35788999999999999999999888999999999876666778999999999886           8999999999886


Q ss_pred             CC----eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcC----
Q 041096          416 KG----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDA----  486 (645)
Q Consensus       416 ~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~----  486 (645)
                      .+    ..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||+   + +|+||||||+||||+.    
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence            54    789999999 9999999986442  238999999999999999999999   7 9999999999999953    


Q ss_pred             --CCCeeeecc---------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccch--hhHHH
Q 041096          487 --NFNARLESS---------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM--VNLVD  553 (645)
Q Consensus       487 --~~~~kl~d~---------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~--~~l~~  553 (645)
                        .+.+||.|.         .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........  .....
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence              346788773         23357899999999999999999999999999999999999999864321110  00111


Q ss_pred             HHHhhhcc--------C----------------------chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 041096          554 WVWGLYAE--------G----------------------RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR  603 (645)
Q Consensus       554 ~~~~~~~~--------~----------------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~  603 (645)
                      ........        +                      .+.+.....  ..++......+.+++..||+.||++|||++
T Consensus       252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK--YKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHT--TCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhc--ccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            11110000        0                      001111111  245677888999999999999999999999


Q ss_pred             HHHH--HHcCCCCCCC
Q 041096          604 RVFQ--ILNNEAEPLV  617 (645)
Q Consensus       604 ~vl~--~L~~~~~~~~  617 (645)
                      |+++  .+.+......
T Consensus       330 ell~hp~f~~~~~~~~  345 (373)
T 1q8y_A          330 GLVNHPWLKDTLGMEE  345 (373)
T ss_dssp             HHHTCGGGTTCTTCTT
T ss_pred             HHhhChhhhcccCccc
Confidence            9998  5666544443

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.4e-36  Score=318.76  Aligned_cols=245  Identities=21%  Similarity=0.277  Sum_probs=193.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeee--CCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAE--KGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~--~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||.||+|....++..||||++...  ..+.+.+|++++++++ ||||+++++++.+  ....++|||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            5688899999999999999999888999999998753  3567899999999997 9999999999987  667999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc-------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF-------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~-------  496 (645)
                      |+++++|.+++..       +++.++..++.|++.||+|||+   .+|+||||||+|||++.++ .+||.|..       
T Consensus       114 ~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          114 HVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             CCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             ccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999842       8899999999999999999999   9999999999999999776 78887732       


Q ss_pred             ----cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh-
Q 041096          497 ----TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK-  570 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-  570 (645)
                          ....||..|+|||.+.+ ..++.++|||||||++|||++|+.||........  .+.. ...........+.++. 
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~--~l~~-~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVR-IAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHH-HHHHHCHHHHHHHHHHT
T ss_pred             CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH--HHHH-HHHhcCCchhhhHHHHh
Confidence                23468899999999987 6789999999999999999999999965332111  1111 1111111111111110 


Q ss_pred             ----------------------hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 ----------------------RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ----------------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                            .............+.+++..||+.||++|||++|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                                  0111111123567888999999999999999999987

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3e-37  Score=327.90  Aligned_cols=268  Identities=20%  Similarity=0.230  Sum_probs=194.1

Q ss_pred             HHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe--
Q 041096          341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE--  418 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--  418 (645)
                      .+.....++|...+.||+|+||.||+|....++..||||++.........+.+|++.+..++||||+++++++...+.  
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            456677899999999999999999999999889999999987765556678889999999999999999999876433  


Q ss_pred             -----EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHh--hcCCCCeeeCCCCCCcEEEcC-CCCe
Q 041096          419 -----LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH--QECEQQVIHRDIKASNIMLDA-NFNA  490 (645)
Q Consensus       419 -----~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlkp~NIlld~-~~~~  490 (645)
                           .++||||+++ +|...+.........+++..+..++.|++.||.|||  +   .+|+||||||+||||+. ++.+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcE
Confidence                 8999999975 666555443333345899999999999999999999  7   99999999999999997 8899


Q ss_pred             eeeccc-----------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          491 RLESSF-----------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       491 kl~d~~-----------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      ||.|..           ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+...... 
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-  250 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC-  250 (360)
T ss_dssp             EECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC-
T ss_pred             EEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC-
Confidence            998732           234689999999998765 4899999999999999999999999875433222222111000 


Q ss_pred             hccCchhHHhhhh----------------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          559 YAEGRIIEAADKR----------------LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       559 ~~~~~~~~~~d~~----------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                      . .......+++.                +...........+.+++..||+.||.+|||+.|+++  .+++..+
T Consensus       251 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          251 P-SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             C-CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             C-CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence            0 00011111110                011122224567889999999999999999999997  4665543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.1e-37  Score=341.62  Aligned_cols=239  Identities=23%  Similarity=0.349  Sum_probs=191.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||+||+|....++..+|+|++...   ......+.+|+.+++.++||||++++++|.+.+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            35688899999999999999999989999999998763   334677899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC---CCeeeeccc----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN---FNARLESSF----  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~---~~~kl~d~~----  496 (645)
                      ||+++|+|.+++.....    +++.++..++.||++||+|||+   .+|+||||||+|||++.+   +.+||.|..    
T Consensus       116 e~~~~g~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMK----FNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             ecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            99999999999876543    8999999999999999999999   999999999999999764   448887722    


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ....||+.|+|||++. +.++.++||||+||++|||++|+.||......    .+...+..    +..     
T Consensus       189 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~----~~~-----  254 (494)
T 3lij_A          189 FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ----EILRKVEK----GKY-----  254 (494)
T ss_dssp             CBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH----TCC-----
T ss_pred             CCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHh----CCC-----
Confidence                   2346899999999886 56999999999999999999999999764321    11111100    000     


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .............+.+++..||+.+|.+|||+.++++
T Consensus       255 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          255 -TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             -CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence             0000000123456778899999999999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.6e-36  Score=318.51  Aligned_cols=254  Identities=20%  Similarity=0.281  Sum_probs=200.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEE-CCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC------eeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYF-ASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN------LVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~-~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~  419 (645)
                      .++|+..+.||+|+||.||+|.. ..++..||||++.......+.+.+|++++..++|+|      ++++++++...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            35788999999999999999998 557899999999876666778999999999997664      99999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-------------
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-------------  486 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-------------  486 (645)
                      ++||||+ +++|.+++.....  ..+++.++..++.|+++||+|||+   .+|+||||||+|||++.             
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence            9999999 8999999976542  248899999999999999999999   99999999999999987             


Q ss_pred             ------CCCeeeeccc---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          487 ------NFNARLESSF---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       487 ------~~~~kl~d~~---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                            ++.+|+.|..         ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+....... 
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-  245 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-  245 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-
T ss_pred             ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-
Confidence                  5678887732         234689999999999999999999999999999999999999976543221111 


Q ss_pred             HHHHHhhhcc--------C--------------c----hhHHhhhhc-cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          552 VDWVWGLYAE--------G--------------R----IIEAADKRL-NGAFNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       552 ~~~~~~~~~~--------~--------------~----~~~~~d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      +.........        .              .    ..+...+.. ...........+.+++..||+.||.+|||++|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            1111000000        0              0    000000000 01223456778999999999999999999999


Q ss_pred             HHH
Q 041096          605 VFQ  607 (645)
Q Consensus       605 vl~  607 (645)
                      +++
T Consensus       326 ll~  328 (339)
T 1z57_A          326 ALK  328 (339)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1e-37  Score=321.12  Aligned_cols=244  Identities=23%  Similarity=0.322  Sum_probs=190.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-CC--eEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-SG--SVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-~~--~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|.+.. ++  ..||+|++...    ....+.+.+|++++++++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            578889999999999999998643 22  36899988752    234578999999999999999999999998765 89


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +|+||+++++|.+++.....   .+++.++..++.|+++||+|||+   .+++||||||+|||++.++.+++.|..    
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeEecccCCCHHHHHHhccC---CcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccc
Confidence            99999999999999986532   38999999999999999999999   999999999999999999999998732    


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....+|..|+|||.+.+..++.++||||||+++|||++ |+.||......    .+....         
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~~---------  237 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILHKI---------  237 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHH---------
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----HHHHHH---------
Confidence                       12346778999999998889999999999999999999 99999764321    111111         


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                         .........+......+.+++..||+.+|++|||+.++++.|++..+
T Consensus       238 ---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          238 ---DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             ---HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ---HccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence               11111112233455678899999999999999999999999986644

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=3.3e-37  Score=318.58  Aligned_cols=239  Identities=28%  Similarity=0.433  Sum_probs=191.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee-----------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE-----------  415 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-----------  415 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.......+.+.+|+.++++++||||+++++++.+           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            467889999999999999999998889999999997666667789999999999999999999998865           


Q ss_pred             --CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeee
Q 041096          416 --KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE  493 (645)
Q Consensus       416 --~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~  493 (645)
                        .+..++||||+++|+|.+++....   ..+++..++.++.|+++||+|||+   .+++||||||+|||++.++..++.
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEe
Confidence              357899999999999999998643   237889999999999999999999   999999999999999999999998


Q ss_pred             ccc--------------------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccccc
Q 041096          494 SSF--------------------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGH  546 (645)
Q Consensus       494 d~~--------------------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~  546 (645)
                      |..                          ....||..|+|||.+.+. .++.++|||||||++|||++   ||.....  
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--  233 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--  233 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh--
Confidence            732                          123578899999999864 78999999999999999998   5543211  


Q ss_pred             chhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          547 KMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       547 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .........          .....+...++......+.+++..||+.||.+|||++++++
T Consensus       234 -~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          234 -RVNILKKLR----------SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             -HHHHHHHHH----------STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHhcc----------ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence             111111110          01111223344455667889999999999999999999986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.1e-37  Score=322.66  Aligned_cols=251  Identities=24%  Similarity=0.316  Sum_probs=181.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ..++|...+.||+|+||.||+|....++..||||++...  ....+++.+|+.++++++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            357899999999999999999999888999999988653  334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcC----CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---
Q 041096          424 EYMPNGSLDRMLYQDS----ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---  496 (645)
                      ||+++++|.+++....    .....+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+++.|..   
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            9999999999987421    112348999999999999999999999   999999999999999999999998731   


Q ss_pred             --------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          497 --------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                                    ....||+.|+|||.+.. ..++.++||||||+++|||++|+.||........   + .........
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~-~~~~~~~~~  245 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---L-MLTLQNDPP  245 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---H-HHHHTSSCC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH---H-HHHhccCCC
Confidence                          12358999999999876 5689999999999999999999999976433211   1 111000000


Q ss_pred             CchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       562 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .......++..    .......+.+++..||+.||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          246 SLETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             CTTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            00000111111    1223456788899999999999999999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-37  Score=327.08  Aligned_cols=257  Identities=23%  Similarity=0.302  Sum_probs=191.7

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE------GKTEFLAELSIIACLRHKNLVQLLGWCAEKG  417 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~  417 (645)
                      ....++|...+.||+|+||.||+|....++..||||++.....      ..+.+.+|++++++++||||+++++++.+.+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            3456789999999999999999999998899999999875221      2356889999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++||||+++ +|..++.....   .+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|.. 
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCCS---SCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             ceEEEEEcCCC-CHHHHHHhcCc---CCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            99999999975 89988876432   38889999999999999999999   999999999999999999999998732 


Q ss_pred             -----------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc-
Q 041096          497 -----------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR-  563 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~-  563 (645)
                                 ....||+.|+|||.+.+. .++.++|||||||++|||++|..||...........+..... ...... 
T Consensus       159 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~-~~~~~~~  237 (346)
T 1ua2_A          159 AKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG-TPTEEQW  237 (346)
T ss_dssp             GSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCTTTS
T ss_pred             ceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcC-CCChhhh
Confidence                       224689999999999764 589999999999999999999999876543222111111100 000000 


Q ss_pred             --hhHHhhh---hccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 041096          564 --IIEAADK---RLNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQI  608 (645)
Q Consensus       564 --~~~~~d~---~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~  608 (645)
                        .....+.   ......+     ......+.+++..||+.||++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence              0000000   0000011     1234678899999999999999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.1e-37  Score=340.17  Aligned_cols=245  Identities=22%  Similarity=0.307  Sum_probs=198.2

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ..++|+..++||+|+||+||+|....++..||||++..   .......+.+|++++++++||||+++++++.+.+..++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            34679999999999999999999998899999999864   233467799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc---CCCCeeeeccc---
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD---ANFNARLESSF---  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld---~~~~~kl~d~~---  496 (645)
                      |||+++|+|.+++.....    +++.++..++.|++.||+|||+   .+|+||||||+|||++   .++.+||.|..   
T Consensus       100 ~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             ECCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EEcCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            999999999999876543    8999999999999999999999   9999999999999995   45568887732   


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....||+.|+|||++.+ .++.++||||+||++|||++|+.||.......    +...+..    +..    
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~----~~~----  239 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILKRVET----GKY----  239 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHH----TCC----
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHh----CCC----
Confidence                    23468999999999875 59999999999999999999999997643211    1111100    000    


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                        .............+.+++..||+.+|.+|||+.++++  .+++.
T Consensus       240 --~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          240 --AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             --CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             --CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence              0000001123456788999999999999999999998  35544

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=3.7e-37  Score=326.34  Aligned_cols=260  Identities=22%  Similarity=0.280  Sum_probs=199.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----CeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~  419 (645)
                      .++|...+.||+|+||.||+|....++..||||++...  ......+.+|++++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46889999999999999999999988999999998753  23356788999999999999999999988764     678


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc--
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT--  497 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~--  497 (645)
                      ++||||+. ++|.+++...     .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|...  
T Consensus        90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            99999996 6999998763     28999999999999999999999   9999999999999999999999987321  


Q ss_pred             --------------------ccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH
Q 041096          498 --------------------LTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW  556 (645)
Q Consensus       498 --------------------~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~  556 (645)
                                          ...||+.|+|||++.. ..++.++|||||||++|||++|+.||...........+.... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-  239 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII-  239 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-
T ss_pred             ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh-
Confidence                                1257899999998764 778999999999999999999999998654321111111100 


Q ss_pred             hhhc-cC--------chhHHhhhhcc-CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCC
Q 041096          557 GLYA-EG--------RIIEAADKRLN-GAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPL  616 (645)
Q Consensus       557 ~~~~-~~--------~~~~~~d~~l~-~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~  616 (645)
                      .... ..        ...+....... ...     .......+.+++..||+.||++|||++++++  .++....+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence            0000 00        00111100000 000     0123456788999999999999999999998  566554433

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.3e-36  Score=318.30  Aligned_cols=241  Identities=21%  Similarity=0.267  Sum_probs=190.0

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---------EGKTEFLAELSIIACLRHKNLVQLLGWCAEK  416 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~  416 (645)
                      ..++|...+.||+|+||.||+|....++..||||.+....         .....+.+|++++++++||||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3467899999999999999999999999999999886522         2234688999999999999999999998765


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC---eeee
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLE  493 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~---~kl~  493 (645)
                      + .++||||+++++|.+++....    .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.   +|+.
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             c-eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEc
Confidence            4 899999999999999997543    38999999999999999999999   99999999999999987665   8887


Q ss_pred             cccc-----------ccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh
Q 041096          494 SSFT-----------LTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       494 d~~~-----------~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                      |...           ...||+.|+|||++.   ...++.++|||||||++|||++|+.||.........   ...+....
T Consensus       160 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~  236 (322)
T 2ycf_A          160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---KDQITSGK  236 (322)
T ss_dssp             CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH---HHHHHHTC
T ss_pred             cCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH---HHHHHhCc
Confidence            7321           235899999999974   567899999999999999999999999764432211   11110000


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        ....    +...    ......+.+++..||+.||++||++.++++
T Consensus       237 --~~~~----~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          237 --YNFI----PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             --CCCC----HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --cccC----chhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence              0000    0000    112456788999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=8.6e-37  Score=323.65  Aligned_cols=252  Identities=21%  Similarity=0.303  Sum_probs=192.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--------C
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--------K  416 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--------~  416 (645)
                      ++|+..+.||+|+||.||+|....++..||+|++...   ......+.+|++++++++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5788999999999999999999988999999987653   2234578899999999999999999999887        3


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF  496 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~  496 (645)
                      +..++||||++ ++|.+.+.....   .+++.++..++.|++.||+|||+   .+|+||||||+||||+.++.+||.|..
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ceEEEEEeccC-CCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccch
Confidence            46899999996 588888765433   38999999999999999999999   999999999999999999999998732


Q ss_pred             ----------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh
Q 041096          497 ----------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       497 ----------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                                      ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.... ...
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~  248 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSI  248 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCC
Confidence                            22357899999999876 458999999999999999999999998754322221111111 100


Q ss_pred             ccCchhHHhh----hhc----cCCCC-HHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 AEGRIIEAAD----KRL----NGAFN-EDE------MKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ~~~~~~~~~d----~~l----~~~~~-~~~------~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ........-.    ..+    ..... .+.      ...+.+++..||+.||++|||++|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            0000000000    000    00000 011      235788999999999999999999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=324.00  Aligned_cols=248  Identities=19%  Similarity=0.331  Sum_probs=194.4

Q ss_pred             HHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          344 RSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       344 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ....++|+..+.||+|+||.||+|....   .+|+|.+...   ....+.+.+|+.++++++|+||+++++++.+.+..+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            3345788899999999999999999864   3889987652   334467889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+++++|.+++....   ..+++.+++.++.|++.||+|||+   .+++||||||+|||++ ++.+++.|..    
T Consensus       106 iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             EEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence            9999999999999997643   238999999999999999999999   9999999999999998 6788887732    


Q ss_pred             -------------cccccCCcccCcccccC---------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          497 -------------TLTAGTMGYLAPEYLQY---------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~---------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                                   ....||+.|+|||.+..         ..++.++||||||+++|||++|+.||.......    ....
T Consensus       179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~  254 (319)
T 2y4i_B          179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA----IIWQ  254 (319)
T ss_dssp             ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH----HHHH
T ss_pred             cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH
Confidence                         12348899999999874         457899999999999999999999997643211    1110


Q ss_pred             HHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCCC
Q 041096          555 VWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLV  617 (645)
Q Consensus       555 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~~  617 (645)
                      .    ..+     ..+.+   ........+.+++..||+.+|++|||++++++.|+.+.....
T Consensus       255 ~----~~~-----~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          255 M----GTG-----MKPNL---SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             H----HTT-----CCCCC---CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             h----ccC-----CCCCC---CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence            0    000     00111   111234567889999999999999999999999998876543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.1e-37  Score=333.25  Aligned_cols=244  Identities=14%  Similarity=0.043  Sum_probs=177.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhc--CCCCeeeee-------eeee
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACL--RHKNLVQLL-------GWCA  414 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l--~H~niv~l~-------g~~~  414 (645)
                      .+|...+.||+|+||.||+|.+..++..||||++....    ...+.+.+|+.++..|  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45788899999999999999999889999999988743    3345677886555555  699988755       3333


Q ss_pred             eC-----------------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHH------HHHHHHHHHHHHHHhhcCCCC
Q 041096          415 EK-----------------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR------LNIVVGLASALTYLHQECEQQ  471 (645)
Q Consensus       415 ~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~  471 (645)
                      ..                 ...+|||||++ |+|.+++.....   .+.+..+      +.++.||++||+|||+   ++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~  214 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQS---KG  214 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHH---CC
Confidence            22                 34899999998 899999986532   2455666      7888999999999999   99


Q ss_pred             eeeCCCCCCcEEEcCCCCeeeecccc---------ccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 041096          472 VIHRDIKASNIMLDANFNARLESSFT---------LTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIE  540 (645)
Q Consensus       472 ivHrDlkp~NIlld~~~~~kl~d~~~---------~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~  540 (645)
                      |+||||||+||||+.++.+||+|...         ...+|+.|+|||++.+  ..++.++|||||||++|||++|+.||.
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999988321         3467799999999987  679999999999999999999999998


Q ss_pred             ccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          541 RETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       541 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ........         .+............+...........+.+++..||+.||++|||+.++++
T Consensus       295 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          295 LVTPGIKG---------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             BCCTTCTT---------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CcCccccc---------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            75322110         00000000000111111111234567888999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.3e-37  Score=341.46  Aligned_cols=239  Identities=26%  Similarity=0.361  Sum_probs=196.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      .++|+..++||+|+||.||+|....++..||||++...    ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            35688899999999999999999989999999998652    33467799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc---
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF---  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~---  496 (645)
                      |||+.+|+|.+++.....    +++..+..++.|++.||+|||+   .+|+||||||+|||+   +.++.+||.|..   
T Consensus       105 ~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSC----CBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            999999999999976543    8999999999999999999999   999999999999999   467889998732   


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ....||+.|+|||++.+ .++.++||||+||++|||++|+.||......    .+...+..    +..    
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~----~~~----  244 (484)
T 3nyv_A          178 HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----DILKKVEK----GKY----  244 (484)
T ss_dssp             HBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH----CCC----
T ss_pred             EcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHc----CCC----
Confidence                    23468999999999876 6999999999999999999999999764321    11111110    000    


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        .............+.+++..||+.+|.+|||++++++
T Consensus       245 --~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          245 --TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             --CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence              0000001123456788999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.3e-36  Score=323.52  Aligned_cols=270  Identities=20%  Similarity=0.226  Sum_probs=202.6

Q ss_pred             CHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc------------hhHhHHHHHHHHhhcCCCCe
Q 041096          339 SYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE------------GKTEFLAELSIIACLRHKNL  406 (645)
Q Consensus       339 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~------------~~~~~~~Ei~~l~~l~H~ni  406 (645)
                      ...++....++|...+.||+|+||.||+|.... +..||||++.....            ..+.+.+|++++++++||||
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            457888899999999999999999999999865 88999998754211            12678999999999999999


Q ss_pred             eeeeeeeee-----CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          407 VQLLGWCAE-----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       407 v~l~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      +++++++..     ....++||||+. |+|.+++.....   .+++..+..++.|++.||+|||+   .+|+||||||+|
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N  164 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI---VISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN  164 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence            999999844     346899999997 789888875432   48999999999999999999999   999999999999


Q ss_pred             EEEcCCCCeeeeccc-----------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchh
Q 041096          482 IMLDANFNARLESSF-----------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMV  549 (645)
Q Consensus       482 Illd~~~~~kl~d~~-----------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~  549 (645)
                      ||++.++.+||.|..           ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..........
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            999999999998732           22468899999999887 678999999999999999999999998654322222


Q ss_pred             hHHHHHHhh-------hccCchhHHhhhhccCC-------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          550 NLVDWVWGL-------YAEGRIIEAADKRLNGA-------FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       550 ~l~~~~~~~-------~~~~~~~~~~d~~l~~~-------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      .+.......       .......+.....+...       ........+.+++..||+.||++|||++++++  .+++..
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            221111000       00000111111111100       01122456888999999999999999999997  456554


Q ss_pred             CCC
Q 041096          614 EPL  616 (645)
Q Consensus       614 ~~~  616 (645)
                      ++.
T Consensus       325 ~~~  327 (362)
T 3pg1_A          325 DPL  327 (362)
T ss_dssp             CGG
T ss_pred             Ccc
Confidence            433

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=5.2e-36  Score=319.51  Aligned_cols=260  Identities=18%  Similarity=0.221  Sum_probs=199.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----Ce
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GE  418 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~  418 (645)
                      ..++|+..+.||+|+||.||+|....++..||||++...  ....+.+.+|++++.+++||||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            356899999999999999999999989999999998753  33347789999999999999999999998754     46


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .++||||+. |+|.+++....     +++.++..++.|++.||+|||+   .+|+||||||+||||+.++.+||.|..  
T Consensus       105 ~~iv~e~~~-~~L~~~l~~~~-----~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKTQH-----LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEcccC-cCHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcce
Confidence            899999996 69999997532     8999999999999999999999   999999999999999999999998722  


Q ss_pred             -------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----
Q 041096          497 -------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----  558 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----  558 (645)
                                   ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.......    
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED  255 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence                         22378999999998754 458999999999999999999999997754433222222110000    


Q ss_pred             ---hccCchhHHhhhhc-cCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          559 ---YAEGRIIEAADKRL-NGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       559 ---~~~~~~~~~~d~~l-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                         .............. ....+     ......+.+++..||+.||++|||++|+++  .+++...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence               00000000000000 00011     122356788999999999999999999997  4555433

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=6.3e-37  Score=326.68  Aligned_cols=242  Identities=18%  Similarity=0.161  Sum_probs=195.1

Q ss_pred             HHhcCCCcCceeccCCceEEEEEE-----ECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeC
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAY-----FASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR---HKNLVQLLGWCAEK  416 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~-----~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~  416 (645)
                      ...++|...++||+|+||.||+|.     ...++..||||++...  ...++..|++++..++   |+||+++++++...
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            345778999999999999999994     4566889999998763  3557888888888887   99999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCC-CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---------
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSE-NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---------  486 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---------  486 (645)
                      +..+|||||+++|+|.+++..... ....+++..++.++.||++||+|||+   .+|+||||||+||||+.         
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~  216 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDED  216 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC----
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccc
Confidence            999999999999999999975432 23459999999999999999999999   99999999999999998         


Q ss_pred             --CCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhh
Q 041096          487 --NFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN  550 (645)
Q Consensus       487 --~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~  550 (645)
                        ++.+||+|..              ...+||++|+|||++.+..++.++|||||||++|||++|+.||.........  
T Consensus       217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--  294 (365)
T 3e7e_A          217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK--  294 (365)
T ss_dssp             --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--
T ss_pred             cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--
Confidence              8999998832              2235899999999999999999999999999999999999999654322110  


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHcCCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSAR-PSMRRVFQILNNEA  613 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Pt~~~vl~~L~~~~  613 (645)
                                       +...+....   ..+.+.+++..|++.+|.+| |+++++.+.|++..
T Consensus       295 -----------------~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          295 -----------------PEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             -----------------ECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             -----------------echhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence                             001111111   13455667788999999998 67888888777543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.1e-36  Score=323.51  Aligned_cols=255  Identities=21%  Similarity=0.224  Sum_probs=194.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------  417 (645)
                      .++|...+.||+|+||.||+|....++..||||++...   ....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46788999999999999999999989999999998653   234567889999999999999999999987654      


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++||||++ ++|.+++..      .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|.. 
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  173 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ceEEEEEcCC-CCHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeec
Confidence            7899999996 578888852      28899999999999999999999   999999999999999999999998832 


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH-------HH---
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW-------VW---  556 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~-------~~---  556 (645)
                                ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+...       .+   
T Consensus       174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  253 (371)
T 2xrw_A          174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  253 (371)
T ss_dssp             ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred             ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence                      2346899999999999999999999999999999999999999765432111111100       00   


Q ss_pred             -----hhhc------cCchhHHhhhhccCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          557 -----GLYA------EGRIIEAADKRLNGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       557 -----~~~~------~~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                           ....      .....+.....+....   .......+.+++..||+.||++|||++|+++  .++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence                 0000      0000000000000000   1223567899999999999999999999988  4554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.6e-36  Score=334.64  Aligned_cols=248  Identities=18%  Similarity=0.192  Sum_probs=198.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..++||+|+||.||+|.+..++..||||++.... ...++..|++++..++| +++..+..++.+.+..+|||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            467999999999999999999998889999999876533 23468899999999987 5666666677778899999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---cCCCCeeeeccc------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---DANFNARLESSF------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---d~~~~~kl~d~~------  496 (645)
                      + +++|.+++.....   .+++.+++.|+.||+.||+|||+   .+|+||||||+||||   +.++.+||.|..      
T Consensus        85 ~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           85 L-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             C-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            9 9999999975433   39999999999999999999999   999999999999999   688899998721      


Q ss_pred             -------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          497 -------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       497 -------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                   ....||..|+|||.+.+..++.++|||||||+||||++|+.||...........+........ ...
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-~~~  236 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-ATS  236 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-HSC
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-ccc
Confidence                         134689999999999999999999999999999999999999987544322221111111000 000


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +.     .+..    ..+..+.+++..||+.+|++||++.+|++.|+.+
T Consensus       237 ~~-----~l~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          237 IE-----ALCR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HH-----HHHT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HH-----HHhc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            00     1111    2245788999999999999999999999988765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.8e-36  Score=333.25  Aligned_cols=181  Identities=24%  Similarity=0.379  Sum_probs=148.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----Ce
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~  418 (645)
                      .++|+..++||+|+||+||+|....++..||||++...   ....+.+.+|++++++++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36789999999999999999999989999999988653   23456789999999999999999999998443     57


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .|+||||+ +++|.+++....    .+++..+..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..  
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla  203 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLA  203 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccc
Confidence            99999998 679999997543    38999999999999999999999   999999999999999999999998732  


Q ss_pred             -------------------------------------cccccCCcccCcccc-cCCCCCcchhHHHHHHHHHHHHcC
Q 041096          497 -------------------------------------TLTAGTMGYLAPEYL-QYGTATEKTDVFSYGVVVLEVACG  535 (645)
Q Consensus       497 -------------------------------------~~~~gt~~y~APE~~-~~~~~t~ksDV~SfGvvl~El~tG  535 (645)
                                                           ...+||+.|+|||++ ....++.++|||||||+||||++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence                                                 123579999999986 456799999999999999999993

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.1e-36  Score=321.17  Aligned_cols=259  Identities=20%  Similarity=0.217  Sum_probs=200.6

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CC-----CeeeeeeeeeeCCe
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HK-----NLVQLLGWCAEKGE  418 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~-----niv~l~g~~~~~~~  418 (645)
                      ...++|+..+.||+|+||+||+|....++..||||++........++..|+.++..++ |+     +|+++++++...+.
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            3467899999999999999999999989999999999876666677888999998885 54     49999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc--CCCCeeeeccc
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD--ANFNARLESSF  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld--~~~~~kl~d~~  496 (645)
                      .+|||||+. ++|.+++.....  ..+++..+..++.|++.||+|||+. ..+|+||||||+||||+  .++.+||.|..
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             eEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            999999995 699999986542  2389999999999999999999941 27899999999999994  47778998732


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh----hhcc-C
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG----LYAE-G  562 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~----~~~~-~  562 (645)
                               ....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......    .... .
T Consensus       207 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (382)
T 2vx3_A          207 SSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP  286 (382)
T ss_dssp             TCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCT
T ss_pred             CceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhH
Confidence                     3357899999999999999999999999999999999999999865432222222111000    0000 0


Q ss_pred             chhHHhhhh----------------------------c-------------cCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 041096          563 RIIEAADKR----------------------------L-------------NGAFNEDEMKRLLLVGLSCANPDSSARPS  601 (645)
Q Consensus       563 ~~~~~~d~~----------------------------l-------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  601 (645)
                      ...+.++..                            +             .......+...+.+++..||+.||++|||
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpt  366 (382)
T 2vx3_A          287 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQ  366 (382)
T ss_dssp             THHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCC
T ss_pred             HHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCC
Confidence            000000000                            0             00122344567899999999999999999


Q ss_pred             HHHHHH
Q 041096          602 MRRVFQ  607 (645)
Q Consensus       602 ~~~vl~  607 (645)
                      ++|+++
T Consensus       367 a~e~L~  372 (382)
T 2vx3_A          367 PYYALQ  372 (382)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.3e-36  Score=324.75  Aligned_cols=259  Identities=20%  Similarity=0.261  Sum_probs=189.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~  417 (645)
                      .++|...+.||+|+||.||+|....++..||||++...   ....+.+.+|+++++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            36788899999999999999999999999999998653   23456788999999999999999999998654      5


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                      ..++|+||+ +++|.+++...     .+++..+..++.||++||+|||+   .+|+||||||+||||+.++.+||.|.. 
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred             eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence            689999999 78999988652     38999999999999999999999   999999999999999999999998732 


Q ss_pred             --------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh-------hhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG-------LYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~-------~~~  560 (645)
                              ....||..|+|||++.+ ..++.++|||||||++|||++|+.||...+.......+......       ...
T Consensus       179 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          179 ARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             cccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence                    33478999999999887 67899999999999999999999999765432221111111000       000


Q ss_pred             cCchhHHhhhhcc--CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCC
Q 041096          561 EGRIIEAADKRLN--GAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEP  615 (645)
Q Consensus       561 ~~~~~~~~d~~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~  615 (645)
                      .......+. .+.  ....     ......+.+++..||+.||++|||++++++  .+++...+
T Consensus       259 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          259 SESARNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  321 (367)
T ss_dssp             CHHHHHHHH-TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             hHHHHHHHh-ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCC
Confidence            000001110 010  0001     112356788999999999999999999987  45554443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3.9e-36  Score=328.05  Aligned_cols=186  Identities=23%  Similarity=0.353  Sum_probs=162.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----Ce
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~  418 (645)
                      .++|...+.||+|+||.||+|....++..||||++...   ....+.+.+|++++++++|+||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46899999999999999999999999999999998763   23456789999999999999999999999776     57


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .|+||||+. ++|.+++....    .+++..+..++.||++||+|||+   .+|+||||||+||||+.++.+||+|..  
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence            999999995 69999997543    38999999999999999999999   999999999999999999999998721  


Q ss_pred             --------------------------------cccccCCcccCcccc-cCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 041096          497 --------------------------------TLTAGTMGYLAPEYL-QYGTATEKTDVFSYGVVVLEVACGRRPIE  540 (645)
Q Consensus       497 --------------------------------~~~~gt~~y~APE~~-~~~~~t~ksDV~SfGvvl~El~tG~~P~~  540 (645)
                                                      ...+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                                            345689999999986 55679999999999999999998655554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=8.8e-37  Score=314.70  Aligned_cols=232  Identities=14%  Similarity=0.123  Sum_probs=186.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|....+++.||||++....    ...+.+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            57888999999999999999999889999999987642    23477999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccccccCC
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTM  503 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt~  503 (645)
                      ||+++++|.+++...      ....+..+++.|++.||+|||+   ++|+||||||+||||+.++.+|++        +.
T Consensus       111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~--------~~  173 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLA--------YP  173 (286)
T ss_dssp             ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEEC--------SC
T ss_pred             EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEE--------ec
Confidence            999999999999532      3455788999999999999999   999999999999999999999985        45


Q ss_pred             cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHH
Q 041096          504 GYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKR  583 (645)
Q Consensus       504 ~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  583 (645)
                      +|++|       ++.++|||||||++|||++|+.||..............    .. .+....  ...+    ..+.+..
T Consensus       174 ~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~----~~-~~~~~~--~~~~----~~~~~~~  235 (286)
T 3uqc_A          174 ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER----DT-AGQPIE--PADI----DRDIPFQ  235 (286)
T ss_dssp             CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB----CT-TSCBCC--HHHH----CTTSCHH
T ss_pred             cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH----Hh-ccCCCC--hhhc----ccCCCHH
Confidence            66664       78999999999999999999999987543221100000    00 000000  0001    1123456


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          584 LLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       584 l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      +.+++..||+.||++| |+.++++.|+.....
T Consensus       236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            8889999999999999 999999999875443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.5e-37  Score=335.11  Aligned_cols=254  Identities=22%  Similarity=0.292  Sum_probs=190.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------CeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------GELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~l  421 (645)
                      .+|...++||+|+||.||+|++..++..||||++....   ..+.+|++++++++|+||++++++|...      ..+++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            35778899999999999999999889999999886532   2345799999999999999999988542      24679


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeeccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESSF----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~~----  496 (645)
                      ||||+++ +|.+.+.........+++..+..++.||++||+|||+   .+|+||||||+||||+.+ +..||.|..    
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            9999975 6777665433333459999999999999999999998   999999999999999966 456898732    


Q ss_pred             -------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch--hH
Q 041096          497 -------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI--IE  566 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~--~~  566 (645)
                             ....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....++.    .......  ..
T Consensus       207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~----~lg~p~~~~~~  282 (420)
T 1j1b_A          207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK----VLGTPTREQIR  282 (420)
T ss_dssp             CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----HHCSCCHHHHH
T ss_pred             cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH----HhCCCCHHHHH
Confidence                   234689999999999764 789999999999999999999999987543222222211    1110000  00


Q ss_pred             Hhhhhcc--------C-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          567 AADKRLN--------G-----AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       567 ~~d~~l~--------~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .+.+...        .     .++......+.+++..||+.||.+|||+.|+++  ++++.
T Consensus       283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence            0111100        0     011223467889999999999999999999986  45543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.4e-36  Score=348.75  Aligned_cols=237  Identities=24%  Similarity=0.333  Sum_probs=200.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~  420 (645)
                      ..++|+..++||+|+||.||+|....+++.||||++...    ....+.+..|..++..+ +|+||+++++++.+.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            356899999999999999999999999999999998752    23456788899999988 7999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      |||||+++|+|..++.....    +++.++..++.||+.||+|||+   .+|+||||||+||||+.++.+||.|..    
T Consensus       419 lV~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EEEeCcCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999999999987543    8999999999999999999999   999999999999999999999998732    


Q ss_pred             --------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 --------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                              ...+||+.|+|||++.+..++.++|||||||+||||++|+.||...+...    +...            ++
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~~------------i~  555 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQS------------IM  555 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH------------HH
T ss_pred             cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----HHHH------------HH
Confidence                    23468999999999999999999999999999999999999998643211    1111            11


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSM-----RRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~~vl~  607 (645)
                      ...  ..++......+.+++..||+.||++||++     +||++
T Consensus       556 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          556 EHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             SSC--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             hCC--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            111  12344455678889999999999999997     77764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-36  Score=315.28  Aligned_cols=256  Identities=19%  Similarity=0.218  Sum_probs=189.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeee-----------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCA-----------  414 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~-----------  414 (645)
                      .++|...+.||+|+||.||+|....++..||+|++... ....+.+.+|++++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            35788899999999999999999988999999988764 344678999999999999999999998873           


Q ss_pred             ---eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc-CCCCe
Q 041096          415 ---EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-ANFNA  490 (645)
Q Consensus       415 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld-~~~~~  490 (645)
                         +.+..++||||++ |+|.+++...     .+++..+..++.|++.||+|||+   .+|+||||||+|||++ .++.+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~  160 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVL  160 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeE
Confidence               4468899999997 6999999642     38999999999999999999999   9999999999999997 56688


Q ss_pred             eeeccc---------------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHH
Q 041096          491 RLESSF---------------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDW  554 (645)
Q Consensus       491 kl~d~~---------------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~  554 (645)
                      |+.|..               ....+|..|+|||.+.. ..++.++|||||||++|||++|+.||...........+...
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  240 (320)
T 2i6l_A          161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES  240 (320)
T ss_dssp             EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            987732               12346888999998865 67899999999999999999999999865432211111110


Q ss_pred             HHhhhccCchh-------HHhhhhcc-CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          555 VWGLYAEGRII-------EAADKRLN-GAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       555 ~~~~~~~~~~~-------~~~d~~l~-~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      . .........       ..+..... ...     .......+.+++..||+.||++|||++++++  .++..
T Consensus       241 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          241 I-PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             S-CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             c-CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence            0 000000000       00011110 000     1123467889999999999999999999987  56543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7e-36  Score=315.98  Aligned_cols=254  Identities=19%  Similarity=0.238  Sum_probs=198.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCC-eEEEEEeccCCcchhHhHHHHHHHHhhcCCCC------eeeeeeeeeeCCeE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSG-SVAAVKRSKHSHEGKTEFLAELSIIACLRHKN------LVQLLGWCAEKGEL  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~  419 (645)
                      .++|+..+.||+|+||.||+|....++ ..||+|++.......+.+.+|+.++++++|++      ++.+++++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            468999999999999999999987665 79999999876666778999999999998766      99999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---------------
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML---------------  484 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll---------------  484 (645)
                      ++||||+ +++|.+++.....  ..+++.++..++.||+.||+|||+   .+|+||||||+||||               
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccc
Confidence            9999999 7778787765432  248999999999999999999998   999999999999999               


Q ss_pred             ----cCCCCeeeeccc---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhH
Q 041096          485 ----DANFNARLESSF---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNL  551 (645)
Q Consensus       485 ----d~~~~~kl~d~~---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l  551 (645)
                          +.++.+||.|..         ....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM  251 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                567888887732         3347899999999999999999999999999999999999999865432211111


Q ss_pred             HHHHHhhhcc--------C--------------chhHHhhhhc-----cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          552 VDWVWGLYAE--------G--------------RIIEAADKRL-----NGAFNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       552 ~~~~~~~~~~--------~--------------~~~~~~d~~l-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      .. .......        .              ..........     .......+...+.+++..||+.||++|||++|
T Consensus       252 ~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          252 EK-ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HH-HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HH-HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            11 1000000        0              0000000000     01122345668899999999999999999999


Q ss_pred             HHH
Q 041096          605 VFQ  607 (645)
Q Consensus       605 vl~  607 (645)
                      +++
T Consensus       331 ~l~  333 (355)
T 2eu9_A          331 ALL  333 (355)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            985

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.3e-36  Score=318.26  Aligned_cols=261  Identities=23%  Similarity=0.311  Sum_probs=197.9

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEEC-CCCeEEEEEeccCC---cchhHhHHHHHHHHhhc---CCCCeeeeeeeee---
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFA-SSGSVAAVKRSKHS---HEGKTEFLAELSIIACL---RHKNLVQLLGWCA---  414 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~---  414 (645)
                      .+.++|+..+.||+|+||.||+|... .++..||+|++...   ......+.+|+.+++.+   +||||++++++|.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            35678999999999999999999984 67899999987642   22234677888887776   8999999999987   


Q ss_pred             --eCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeee
Q 041096          415 --EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL  492 (645)
Q Consensus       415 --~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl  492 (645)
                        .....++||||+. |+|.+++.....  ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+|+
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence              4567899999997 699999976543  238999999999999999999999   99999999999999999999999


Q ss_pred             eccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhcc
Q 041096          493 ESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE  561 (645)
Q Consensus       493 ~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~  561 (645)
                      .|..           ....||..|+|||.+.+..++.++|||||||++|||++|+.||...........+.+.. .....
T Consensus       162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~  240 (326)
T 1blx_A          162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI-GLPGE  240 (326)
T ss_dssp             CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCG
T ss_pred             ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc-CCCCc
Confidence            8732           23467999999999999999999999999999999999999998654322211111110 00000


Q ss_pred             Cchh-------HHhhh---hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          562 GRII-------EAADK---RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       562 ~~~~-------~~~d~---~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ....       .....   .....+.......+.+++..||+.||++|||+.++++  .+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence            0000       00000   0000112234566788999999999999999999995  35443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.6e-36  Score=347.32  Aligned_cols=244  Identities=22%  Similarity=0.348  Sum_probs=199.4

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECC---CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFAS---SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ..++|+..+.||+|+||.||+|.+..   .+..||+|.+...  ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence            34678888999999999999999854   3567999988763  3345779999999999999999999999854 5689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecccc---
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFT---  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~---  497 (645)
                      +||||+++|+|.+++.....   .+++..++.++.|+++||+|||+   .+|+||||||+|||++.++.+||.|...   
T Consensus       467 lv~E~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             EEEEcCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence            99999999999999976532   38999999999999999999999   9999999999999999999999988321   


Q ss_pred             ----------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          498 ----------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       498 ----------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ...+|+.|+|||.+.+..++.++|||||||++|||++ |..||.......    ...             
T Consensus       541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~~~-------------  603 (656)
T 2j0j_A          541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIG-------------  603 (656)
T ss_dssp             CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHH-------------
T ss_pred             cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH----HHH-------------
Confidence                      1245678999999999999999999999999999997 999997643211    111             


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      .+........+...+..+.+++..||+.||++|||+.++++.|+.+.
T Consensus       604 ~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          604 RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            11111122334455677889999999999999999999999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.9e-36  Score=309.35  Aligned_cols=241  Identities=23%  Similarity=0.321  Sum_probs=195.0

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ...++|+..+.||+|+||.||+|....++..||+|++...   ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            3456899999999999999999999888999999997652   3346779999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC---Ceeeeccc--
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF---NARLESSF--  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~---~~kl~d~~--  496 (645)
                      |+||+++++|.+++.....    +++.+++.++.|++.||+|||+   .+++||||||+||+++.++   .+|+.|..  
T Consensus        99 v~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             EEEccCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            9999999999999876543    8999999999999999999999   9999999999999997643   58887732  


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ....||+.|+|||.+.+ .++.++||||||+++|||++|+.||......    .+...+    ..+...  
T Consensus       172 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~----~~~~~~--  240 (287)
T 2wei_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKRV----ETGKYA--  240 (287)
T ss_dssp             GTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHCCCC--
T ss_pred             eeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHHH----HcCCCC--
Confidence                     12347889999998875 4899999999999999999999999764321    111111    000000  


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ............+.+++..||+.||++|||+.++++
T Consensus       241 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          241 ----FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             ----CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence                000000123456788999999999999999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=6.3e-36  Score=319.82  Aligned_cols=255  Identities=18%  Similarity=0.230  Sum_probs=197.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeE----
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGEL----  419 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~----  419 (645)
                      .++|...+.||+|+||.||+|....++..||||++...   ....+.+.+|+.++++++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46788899999999999999999999999999998763   22356788999999999999999999999877654    


Q ss_pred             --EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          420 --LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       420 --~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                        ++||||+. ++|.+++..      .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||.|.. 
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence              99999996 688888732      28999999999999999999999   999999999999999999999998832 


Q ss_pred             --------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-------hhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-------GLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-------~~~~  560 (645)
                              ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.....       ....
T Consensus       191 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (371)
T 4exu_A          191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  270 (371)
T ss_dssp             C--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred             ccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence                    33468999999999987 6789999999999999999999999986543222211111100       0000


Q ss_pred             cCchhHHhhhhccCC-------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          561 EGRIIEAADKRLNGA-------FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~-------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      ........ ..+...       ........+.+++..||+.||++|||++|+++  .++..
T Consensus       271 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          271 DKAAKSYI-QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             CHHHHHHH-HHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhhhh-hccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            00000000 001000       01122467889999999999999999999987  35543

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=100.00  E-value=9.7e-36  Score=299.01  Aligned_cols=192  Identities=18%  Similarity=0.215  Sum_probs=151.7

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCC-CCCCCceEEEEecC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP-SSFGDGLAFFISPD  112 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~-~~~g~G~aF~l~p~  112 (645)
                      ..++.++|+|.+.+|.|+||++   ..++.||+||+.|+++        +||+|+|+|+|.+++. ..+||||||+|+|.
T Consensus        24 i~~~~l~G~a~i~~g~l~LT~~---~~~~~G~~w~~~pi~~--------~sF~t~F~F~I~~~~~~~~~gdGlAF~l~~~   92 (253)
T 2dur_A           24 MPLWDFQGSTILTSQYVRLTPD---ERSKEGSIWNHQPCFL--------KDWEMHVHFKVHGTGKKNLHGDGIALWYTRD   92 (253)
T ss_dssp             CCSEEEEETCEECSSCEEEECS---SSSEEEEEEESSCBCC--------SSEEEEEEEEEECCCCTTCCCCEEEEEEESC
T ss_pred             cCCEEEccceEEECCEEEECCC---CCCCEEEEEeCCCCcc--------CcEEEEEEEEEecCCCCCcCCCcEEEEEECC
Confidence            3699999999999999999997   4578999999999997        5899999999998765 57899999999997


Q ss_pred             CCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCc-----------ccccc-C
Q 041096          113 NQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL-----------QGIDL-K  180 (645)
Q Consensus       113 ~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~-----------~~~~~-~  180 (645)
                      ...   .|++||+.+     .++.|||||||+.|.++.|    |++++|+++.+..+..+..           ...++ +
T Consensus        93 ~~~---~G~~lG~~~-----~~~gvAVefDT~~n~~~~~----~~~~~I~~~~n~gs~~~d~~~dg~~~~~~~c~~~~~n  160 (253)
T 2dur_A           93 RLV---PGPVFGSKD-----NFHGLAIFLDTYPNDETTE----RVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRN  160 (253)
T ss_dssp             CSC---EETBTEECS-----SCEEEEEEEECSCCCTTCC----SCSSEEEEEEEESCCCCCGGGTTGGGCCEEEECCCBT
T ss_pred             CCC---CCcccCcCC-----CCCEEEEEEECCCCCCCCC----CCCcEEEEEecCCceeeeccCCCcccccccccHhhcc
Confidence            653   579999733     3688999999999976533    5555555555544333310           01133 3


Q ss_pred             CCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeec
Q 041096          181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS  253 (645)
Q Consensus       181 ~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~  253 (645)
                      .|..++|||+|++.  +|+|.+++.+..+..++++  ++ ...||+++||||||+||...+.|+|++|+|.+-
T Consensus       161 ~g~~~~v~I~Y~~~--~L~V~l~~~~~~~~~~~~~--~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~sl  228 (253)
T 2dur_A          161 RDHDTFLAVRYSRG--RLTVMTDLEDKNEWKNCID--IT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL  228 (253)
T ss_dssp             CSSCEEEEEEEETT--EEEEEEECSSSSCCEEEEE--EC-CEECCSSBEEEEEEEESSSCCEEEEEEEEEEEC
T ss_pred             CCCCeEEEEEEECC--EEEEEEeCCCCCCceEEEE--eC-CcccCCCcEEEEEeccCCCcceEEEEEEEEEec
Confidence            48899999999975  8999999765445555654  34 446899999999999999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.9e-36  Score=319.41  Aligned_cols=254  Identities=19%  Similarity=0.240  Sum_probs=174.8

Q ss_pred             HhcCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEE
Q 041096          346 ATRGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELL  420 (645)
Q Consensus       346 ~~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~  420 (645)
                      ..++|... ++||+|+||.||+|....+++.||||++.......+   +....+..++||||+++++++..    ....+
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            35678884 469999999999999998999999999876432222   22334566799999999999876    44689


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC---CCeeeeccc-
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN---FNARLESSF-  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~---~~~kl~d~~-  496 (645)
                      +||||+++|+|.+++.....  ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.+   +.+||.|.. 
T Consensus       103 lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence            99999999999999986542  348999999999999999999999   999999999999999864   448887732 


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEA  567 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  567 (645)
                               ....||+.|+|||++....++.++||||||+++|||++|+.||...............          ...
T Consensus       178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------~~~  247 (336)
T 3fhr_A          178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR----------IRL  247 (336)
T ss_dssp             CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred             ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh----------hhc
Confidence                     2346799999999998888999999999999999999999999764332111100000          000


Q ss_pred             hhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCC
Q 041096          568 ADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLV  617 (645)
Q Consensus       568 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~  617 (645)
                      ....+...........+.+++..||+.||.+|||++++++  .+.+....+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  299 (336)
T 3fhr_A          248 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ  299 (336)
T ss_dssp             ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCC
T ss_pred             cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCC
Confidence            0001111111234556788999999999999999999998  6665544433

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-36  Score=316.16  Aligned_cols=239  Identities=23%  Similarity=0.374  Sum_probs=188.3

Q ss_pred             HHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhc----CCCCeeeeeeee
Q 041096          345 SATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACL----RHKNLVQLLGWC  413 (645)
Q Consensus       345 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l----~H~niv~l~g~~  413 (645)
                      ...++|+..+.||+|+||.||+|....++..||||++....       .....+.+|+.++.++    +|+||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            44578999999999999999999998889999999986532       2334577899999999    899999999999


Q ss_pred             eeCCeEEEEEec-CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc-CCCCee
Q 041096          414 AEKGELLLVYEY-MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-ANFNAR  491 (645)
Q Consensus       414 ~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld-~~~~~k  491 (645)
                      ...+..++|+|| +.+++|.+++.....    +++..++.++.|+++||+|||+   .+|+||||||+||+++ .++.++
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGP----LGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence            999999999999 789999999986543    8999999999999999999999   8999999999999999 788899


Q ss_pred             eeccc----------cccccCCcccCcccccCCCCC-cchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhc
Q 041096          492 LESSF----------TLTAGTMGYLAPEYLQYGTAT-EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA  560 (645)
Q Consensus       492 l~d~~----------~~~~gt~~y~APE~~~~~~~t-~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~  560 (645)
                      +.|..          ....||..|+|||++.+..+. .++||||||+++|||++|+.||.....      .         
T Consensus       181 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~---------  245 (312)
T 2iwi_A          181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------I---------  245 (312)
T ss_dssp             ECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------H---------
T ss_pred             EEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------H---------
Confidence            98732          234689999999999877664 599999999999999999999965311      0         


Q ss_pred             cCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCC
Q 041096          561 EGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAE  614 (645)
Q Consensus       561 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~  614 (645)
                             ....  ..++......+.+++..||+.+|++|||++++++  .++...+
T Consensus       246 -------~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          246 -------LEAE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             -------HHTC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             -------hhhc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence                   0011  1122334556788999999999999999999998  4544433

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1e-36  Score=317.65  Aligned_cols=247  Identities=18%  Similarity=0.293  Sum_probs=194.9

Q ss_pred             cccCHHHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcC--CCCeeeee
Q 041096          336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLR--HKNLVQLL  410 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~--H~niv~l~  410 (645)
                      +.+.++.+....++|+..+.||+|+||.||++.... +..||||.+...   ....+.+.+|++++.+++  |+||++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            344444455556789999999999999999999865 888999988653   334567899999999997  59999999


Q ss_pred             eeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       411 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      +++.+.+..++||| +.+++|.+++....    .+++.+++.++.|+++||+|||+   .+++||||||+|||++. +.+
T Consensus        95 ~~~~~~~~~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~  165 (313)
T 3cek_A           95 DYEITDQYIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GML  165 (313)
T ss_dssp             EEEECSSEEEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEE
T ss_pred             EEeecCCEEEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeE
Confidence            99999999999999 56899999998654    38999999999999999999999   99999999999999964 788


Q ss_pred             eeeccc--------------cccccCCcccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCccccc
Q 041096          491 RLESSF--------------TLTAGTMGYLAPEYLQY-----------GTATEKTDVFSYGVVVLEVACGRRPIERETEG  545 (645)
Q Consensus       491 kl~d~~--------------~~~~gt~~y~APE~~~~-----------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~  545 (645)
                      |+.|..              ....||+.|+|||.+.+           ..++.++||||||+++|||++|+.||......
T Consensus       166 kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  245 (313)
T 3cek_A          166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ  245 (313)
T ss_dssp             EECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred             EEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence            987732              12358999999999875           46889999999999999999999999754221


Q ss_pred             cchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       546 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .      .         .+...+++.....++......+.+++..||+.||.+||+++++++
T Consensus       246 ~------~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          246 I------S---------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             H------H---------HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H------H---------HHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            0      0         011222222222333333567888999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.3e-36  Score=317.03  Aligned_cols=245  Identities=26%  Similarity=0.364  Sum_probs=175.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHH-HHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELS-IIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|...+.||+|+||.||+|....++..||||++...  .....++..|+. +++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            36788889999999999999999988999999998763  233445666666 677789999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcC-CCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          424 EYMPNGSLDRMLYQDS-ENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||++ ++|.+++.... .....+++..+..++.|++.||.|||+   . +++||||||+|||++.++.+||+|..     
T Consensus       101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            9997 48888776321 112348999999999999999999999   7 99999999999999999999998732     


Q ss_pred             ------cccccCCcccCcccc----cCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ------TLTAGTMGYLAPEYL----QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~----~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                            ....||+.|+|||.+    .+..++.++||||||+++|||++|+.||.......      +.....      ..
T Consensus       177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~------~~  244 (327)
T 3aln_A          177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF------DQLTQV------VK  244 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCC------CC
T ss_pred             ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH------HHHHHH------hc
Confidence                  123689999999998    45678999999999999999999999997532210      000000      00


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ...+.+...........+.+++..||+.||++|||++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            00011111111234567888999999999999999999976

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3.3e-36  Score=318.30  Aligned_cols=252  Identities=19%  Similarity=0.278  Sum_probs=194.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcch------------------hHhHHHHHHHHhhcCCCCeee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEG------------------KTEFLAELSIIACLRHKNLVQ  408 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~------------------~~~~~~Ei~~l~~l~H~niv~  408 (645)
                      .++|...+.||+|+||.||+|..  ++..||+|++......                  .+.+.+|+.++++++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46889999999999999999998  6899999987652111                  178999999999999999999


Q ss_pred             eeeeeeeCCeEEEEEecCCCCCHhHH------hhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 041096          409 LLGWCAEKGELLLVYEYMPNGSLDRM------LYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNI  482 (645)
Q Consensus       409 l~g~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  482 (645)
                      +++++.+.+..++||||+++++|.++      +....  ...+++..++.++.|++.||+|||+  ..+++||||||+||
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNI  183 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGE
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhE
Confidence            99999999999999999999999999      54321  3459999999999999999999996  37999999999999


Q ss_pred             EEcCCCCeeeeccc----------cccccCCcccCcccccCC-CCCc-chhHHHHHHHHHHHHcCCCCCCccccccchhh
Q 041096          483 MLDANFNARLESSF----------TLTAGTMGYLAPEYLQYG-TATE-KTDVFSYGVVVLEVACGRRPIERETEGHKMVN  550 (645)
Q Consensus       483 lld~~~~~kl~d~~----------~~~~gt~~y~APE~~~~~-~~t~-ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~  550 (645)
                      |++.++.++++|..          ....||..|+|||.+.+. .++. ++||||||+++|||++|+.||.......   .
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~  260 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV---E  260 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH---H
T ss_pred             EEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH---H
Confidence            99999999998732          234689999999999887 6666 9999999999999999999997654311   1


Q ss_pred             HHHHHHhhhcc-C----chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          551 LVDWVWGLYAE-G----RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       551 l~~~~~~~~~~-~----~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +...+...... .    .......+.............+.+++..||+.||.+|||++++++
T Consensus       261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11111110000 0    000000000000011234567888999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.6e-36  Score=316.11  Aligned_cols=231  Identities=22%  Similarity=0.365  Sum_probs=193.1

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcC--CCCeeeeeeeeeeC
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLR--HKNLVQLLGWCAEK  416 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~  416 (645)
                      ..++|+..+.||+|+||.||+|....++..||||++....       ...+.+.+|+.++++++  |+||+++++++.+.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            4567999999999999999999998899999999886532       12356788999999996  59999999999999


Q ss_pred             CeEEEEEecCCC-CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc-CCCCeeeec
Q 041096          417 GELLLVYEYMPN-GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-ANFNARLES  494 (645)
Q Consensus       417 ~~~~lV~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld-~~~~~kl~d  494 (645)
                      +..++|+||+.+ ++|.+++.....    +++..++.++.|+++||+|||+   .+|+||||||+|||++ .++.+||.|
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITERGA----LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             CcEEEEEEcCCCCccHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEee
Confidence            999999999976 899999986543    8999999999999999999999   9999999999999999 778899987


Q ss_pred             cc----------cccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          495 SF----------TLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       495 ~~----------~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                      ..          ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....      ..           
T Consensus       194 fg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~-----------  256 (320)
T 3a99_A          194 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------II-----------  256 (320)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH-----------
T ss_pred             CccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hh-----------
Confidence            32          23468999999999987665 7889999999999999999999965311      00           


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                           ....  .++......+.+++..||+.||++|||++++++
T Consensus       257 -----~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          257 -----RGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -----HCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----cccc--cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 0000  112223456788999999999999999999987

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.7e-36  Score=327.00  Aligned_cols=256  Identities=22%  Similarity=0.279  Sum_probs=187.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------eEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------ELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~l  421 (645)
                      .+|...++||+|+||.||+|....++. +|+|++.....   ...+|+++++.++||||+++++++...+      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            457888999999999999999987555 77777654322   2347999999999999999999986543      3889


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc-CCCCeeeeccc----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD-ANFNARLESSF----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld-~~~~~kl~d~~----  496 (645)
                      ||||++++ +...+.........+++..+..++.|+++||+|||+   .+|+||||||+||||+ .++.+||.|..    
T Consensus       116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            99999764 444443322223358999999999999999999999   9999999999999999 78889998732    


Q ss_pred             -------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 -------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.... ..... .....+
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~-g~p~~-~~~~~~  269 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVL-GTPSR-EQIKTM  269 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCH-HHHHHH
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCCH-HHHHhh
Confidence                   234678999999998765 58999999999999999999999998754322222222110 00000 000011


Q ss_pred             hhhcc-------------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          569 DKRLN-------------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       569 d~~l~-------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                      .+...             ..+.......+.+++..||+.||.+|||+.|+++  .+++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            11100             0011223457889999999999999999999997  366543

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=100.00  E-value=4.2e-36  Score=266.69  Aligned_cols=114  Identities=39%  Similarity=0.568  Sum_probs=106.0

Q ss_pred             CcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcce
Q 041096          134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPL  213 (645)
Q Consensus       134 ~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~  213 (645)
                      ||+|||||||++|.+++||++|||||||||+.|.++.++     ++.+|+.++|||+||+.+++|+|+|++.+.+  .|+
T Consensus         1 n~~vAVEFDT~~N~e~~Dp~~nHVGIdvNsi~S~~s~~~-----~l~sG~~~~v~I~Yd~~~~~L~V~l~~~~~~--~p~   73 (133)
T 1qmo_E            1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKW-----DWQNGKIATAHISYNSVSKRLSVTSYYAGSK--PAT   73 (133)
T ss_dssp             CCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC-----CCCTTSCEEEEEEEETTTTEEEEEEECSSSC--CEE
T ss_pred             CCEEEEEEeCCcCccccCCCCCeeEEecccccccceeee-----EEcCCCEEEEEEEEeCCCcEEEEEEccCCCc--cce
Confidence            578999999999998779999999999999999998875     4789999999999999999999999976543  799


Q ss_pred             EEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeecC
Q 041096          214 LKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSG  254 (645)
Q Consensus       214 l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~~  254 (645)
                      |+.++||+++|+++||||||||||...|.|+|++|+|++..
T Consensus        74 ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~l  114 (133)
T 1qmo_E           74 LSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSL  114 (133)
T ss_dssp             EEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred             EEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEeeC
Confidence            99999999999999999999999999999999999999863

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=319.97  Aligned_cols=257  Identities=18%  Similarity=0.231  Sum_probs=180.4

Q ss_pred             CCc-CceeccCCceEEEEEEEC--CCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEEEe
Q 041096          350 FHS-NRILGRGAFGNVYKAYFA--SSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLVYE  424 (645)
Q Consensus       350 f~~-~~~lG~G~fg~Vy~g~~~--~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E  424 (645)
                      |.. .++||+|+||.||+|...  .++..||||++.... ....+.+|+.++++++||||+++++++..  ....++|||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e  100 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD  100 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence            444 457999999999999976  457899999987643 34568899999999999999999999954  678999999


Q ss_pred             cCCCCCHhHHhhhcC-----CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----cCCCCeeeecc
Q 041096          425 YMPNGSLDRMLYQDS-----ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML----DANFNARLESS  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll----d~~~~~kl~d~  495 (645)
                      |+. ++|.+++....     .....+++..++.++.||+.||+|||+   .+|+||||||+||||    +.++.+||+|.
T Consensus       101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  176 (405)
T 3rgf_A          101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADM  176 (405)
T ss_dssp             CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred             CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence            995 68888876332     112248999999999999999999999   999999999999999    77789999873


Q ss_pred             c---------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccccc-----chhhHHHH
Q 041096          496 F---------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGH-----KMVNLVDW  554 (645)
Q Consensus       496 ~---------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~-----~~~~l~~~  554 (645)
                      .               ...+||+.|+|||++.+. .++.++|||||||++|||++|+.||.......     .....+..
T Consensus       177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~  256 (405)
T 3rgf_A          177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR  256 (405)
T ss_dssp             TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred             CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence            2               224689999999999874 58999999999999999999999997543210     00111111


Q ss_pred             HHhhhc---cCc---------hhHHhhhhcc---CCCC---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--H
Q 041096          555 VWGLYA---EGR---------IIEAADKRLN---GAFN---------EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--I  608 (645)
Q Consensus       555 ~~~~~~---~~~---------~~~~~d~~l~---~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~  608 (645)
                      +.....   ...         ..........   ....         ......+.+++..||+.||.+|||++|+++  .
T Consensus       257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~  336 (405)
T 3rgf_A          257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY  336 (405)
T ss_dssp             HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence            111110   000         0000000000   0000         011345778999999999999999999998  4


Q ss_pred             HcC
Q 041096          609 LNN  611 (645)
Q Consensus       609 L~~  611 (645)
                      +.+
T Consensus       337 f~~  339 (405)
T 3rgf_A          337 FLE  339 (405)
T ss_dssp             GTS
T ss_pred             hcc
Confidence            543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=315.09  Aligned_cols=256  Identities=18%  Similarity=0.218  Sum_probs=195.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe-----
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE-----  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----  418 (645)
                      .++|...+.||+|+||.||+|....++..||||++....   ...+.+.+|+.++++++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            357888999999999999999999999999999987632   235678899999999999999999999987653     


Q ss_pred             -EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-
Q 041096          419 -LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-  496 (645)
Q Consensus       419 -~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-  496 (645)
                       .++||||+. ++|.+++..      .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+|+.|.. 
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  172 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL  172 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred             eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccc
Confidence             599999996 688887742      28999999999999999999999   999999999999999999999998732 


Q ss_pred             --------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHH-------hhhc
Q 041096          497 --------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVW-------GLYA  560 (645)
Q Consensus       497 --------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~-------~~~~  560 (645)
                              ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.....       ....
T Consensus       173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  252 (353)
T 3coi_A          173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  252 (353)
T ss_dssp             TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred             ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence                    22468999999999887 6789999999999999999999999986543221111111000       0000


Q ss_pred             cCchhHHhhh---hcc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          561 EGRIIEAADK---RLN---GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       561 ~~~~~~~~d~---~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .......+..   ...   ..........+.+++..|++.||++|||++++++  .++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            0000000000   000   0112234567888999999999999999999986  45543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.7e-35  Score=308.53  Aligned_cols=240  Identities=23%  Similarity=0.327  Sum_probs=176.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc--h-hHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE--G-KTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~--~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..+.||+|+||.||+|....++..||||++.....  . .+.+.++..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            3568888999999999999999998899999999876432  2 233445556688889999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ-QVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      ||+ ++.+..+......   .+++..+..++.|+++||+|||+   . +++||||||+|||++.++.+||.|..      
T Consensus       104 e~~-~~~~~~l~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             CCC-SEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             ecc-CCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            999 5555555543222   38999999999999999999998   5 99999999999999999999998732      


Q ss_pred             -----cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 -----TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                           ....||+.|+|||.+.     ...++.++||||||+++|||++|+.||.......   ......   ....    
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~---~~~~----  246 (318)
T 2dyl_A          177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTKV---LQEE----  246 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHH---HHSC----
T ss_pred             CCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---HHHHHH---hccC----
Confidence                 1236899999999994     4568999999999999999999999997532211   111110   0000    


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        .+.+.  ........+.+++..||+.||.+||+++++++
T Consensus       247 --~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 --PPLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             --CCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             --CCCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence              00010  01123456788899999999999999999976

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=100.00  E-value=1.2e-34  Score=291.67  Aligned_cols=203  Identities=17%  Similarity=0.183  Sum_probs=156.9

Q ss_pred             eeEEeCCCC-----CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           25 MNFDFTSFN-----LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        25 ~~f~~~~f~-----~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      .||..+.+.     ..++.++|||.+.++.|+||++   ..++.||+||+.|+++        +||+|+|+|+|.+++ .
T Consensus        34 ~Sf~~P~~~~~~~~i~~w~~~G~a~i~~~~IrLT~~---~~~~~G~~w~~~p~~~--------~sF~t~F~F~I~~~~-~  101 (260)
T 1gv9_A           34 YSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPS---LKSQRGSVWTKTKAAF--------ENWEVEVTFRVTGRG-R  101 (260)
T ss_dssp             GCEECSSCSCTTSCBTTEEEEETCEECSSCEEEECS---STTCEEEEEESSCBCC--------SSEEEEEEEEEECSS-S
T ss_pred             eeEcCccccCCCCccCCeEEcccEEeeCCEEEeCCC---CCCCEEEEEECCCccc--------cCEEEEEEEEEecCC-C
Confidence            456555443     3689999999999999999997   4578999999999964        799999999999765 4


Q ss_pred             CCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCC-CC------CCCeeeeecCC-cccccccC
Q 041096          100 SFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFD-DP------DENHIGLDIDS-LESIKTAD  171 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~-d~------~~~Hvgi~vns-~~s~~~~~  171 (645)
                      .+||||||+|+|....   .|+++|+.     ..++.|||||||+.|.++. +|      +++|+|||+|+ +.|.....
T Consensus       102 ~~gdGlAF~l~~~~~~---~g~~~G~~-----~~~~gvaVefDT~~N~~~~~~p~I~~~indg~~~~d~~~d~~s~~~~~  173 (260)
T 1gv9_A          102 IGADGLAIWYTENQGL---DGPVFGSA-----DMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALAS  173 (260)
T ss_dssp             CCCCEEEEEEESSCCC---EEEETTEC-----SCCEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHCSEE
T ss_pred             CCCCeEEEEEecCCCC---CCCccCCC-----CCCCEEEEEEECCCCCCCCCCCceEEEeCCCceEeecCCCcccceeec
Confidence            6799999999997543   68889983     3467899999999997642 23      46788888875 55544333


Q ss_pred             CCcccccc-CCCCeEEEEEEecCCCceEEEEEEeCCC-CCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeee
Q 041096          172 PILQGIDL-KSGNVITAWIDYKNDLRMLKVFMSYSNL-KPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWS  249 (645)
Q Consensus       172 ~~~~~~~~-~~g~~~~~~I~Y~~~~~~l~v~~~~~~~-~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~  249 (645)
                      +.   ..+ ++|..++|||+|++.  +|+|.+.+... ......+...+| ...||+++||||||+||...+.|+|++|+
T Consensus       174 c~---~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~~~~vGfSAaTG~~~e~hdIlsw~  247 (260)
T 1gv9_A          174 CQ---RDFRNKPYPVRAKITYYQK--TLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFL  247 (260)
T ss_dssp             EC---CCCBSCSSCEEEEEEEETT--EEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEE
T ss_pred             cC---hhhccCCCcEEEEEEEECC--EEEEEEeeccCCCCCcceEEEEEc-ccccCCCcEEEEEEeCCCCcceEEEEEEE
Confidence            21   123 358999999999986  89999986421 111235777888 67899999999999999999999999999


Q ss_pred             eeec
Q 041096          250 FQTS  253 (645)
Q Consensus       250 f~~~  253 (645)
                      |..-
T Consensus       248 ~~~l  251 (260)
T 1gv9_A          248 TFQL  251 (260)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.6e-34  Score=315.46  Aligned_cols=239  Identities=21%  Similarity=0.285  Sum_probs=178.8

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      .|...++||+|+||+||.+.. .++..||||++...  ..+.+.+|+.++.++ +||||+++++++.+.+..+|||||+.
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            345568899999999976544 35899999988652  245678999999987 89999999999999999999999995


Q ss_pred             CCCHhHHhhhcCCCCcc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-------------CCee
Q 041096          428 NGSLDRMLYQDSENGVL---LSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-------------FNAR  491 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-------------~~~k  491 (645)
                       |+|.+++.........   ..+..++.++.||+.||+|||+   .+|+||||||+||||+.+             +.+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             7999999865432211   2334567899999999999999   999999999999999754             4688


Q ss_pred             eeccc----------------cccccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCccccccc
Q 041096          492 LESSF----------------TLTAGTMGYLAPEYLQY-------GTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHK  547 (645)
Q Consensus       492 l~d~~----------------~~~~gt~~y~APE~~~~-------~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~  547 (645)
                      |+|..                ....||+.|+|||++.+       ..++.++|||||||++|||++ |+.||....... 
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-  247 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-  247 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence            87721                12368999999999975       678999999999999999999 999996532211 


Q ss_pred             hhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          548 MVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       548 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          ..........        +.+...........+.+++..||+.||.+|||+.+|++
T Consensus       248 ----~~i~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 ----SNIIRGIFSL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ----HHHHHTCCCC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----HHHhcCCCCc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                1111111110        01111224556778999999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=4.5e-35  Score=330.90  Aligned_cols=248  Identities=24%  Similarity=0.287  Sum_probs=190.2

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeee------CCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAE------KGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~------~~~  418 (645)
                      .++|+..+.||+|+||.||+|....++..||||++...  ....+.+.+|++++++++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            47899999999999999999999888999999998763  3445679999999999999999999999765      667


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC---eeeecc
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN---ARLESS  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~---~kl~d~  495 (645)
                      .++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.   +++.|.
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccc
Confidence            8999999999999999986442 2348899999999999999999999   99999999999999997665   778762


Q ss_pred             c-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          496 F-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       496 ~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                      .           ....||..|+|||.+.+..++.++|||||||++|||++|+.||......      ..|..........
T Consensus       169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------~~~~~~i~~~~~~  242 (676)
T 3qa8_A          169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVREKSNE  242 (676)
T ss_dssp             CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH------HHSSTTCC-----
T ss_pred             ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch------hhhhhhhhcccch
Confidence            1           2346899999999999999999999999999999999999999753211      1110000000000


Q ss_pred             hHHhh----------hh--ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 041096          565 IEAAD----------KR--LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRR  604 (645)
Q Consensus       565 ~~~~d----------~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~  604 (645)
                      .....          ..  ............+.+++..||+.||++|||+++
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            00000          00  011234456788999999999999999999866

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.2e-34  Score=311.73  Aligned_cols=235  Identities=21%  Similarity=0.245  Sum_probs=177.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .+|...++||+|+||+||.... .++..||||++....  ...+.+|+++++++ +||||+++++++.+.+..||||||+
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~  100 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC  100 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence            4588889999999999553333 347899999986532  23467899999999 7999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-----CCCeeeeccc-----
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-----NFNARLESSF-----  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-----~~~~kl~d~~-----  496 (645)
                      . |+|.+++......   +.+..++.++.||++||+|||+   .+|+||||||+||||+.     ...+||+|..     
T Consensus       101 ~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          101 A-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             S-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             C-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            5 6999999765432   4445567899999999999999   99999999999999953     2346677621     


Q ss_pred             ----------cccccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccC
Q 041096          497 ----------TLTAGTMGYLAPEYLQ---YGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~---~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                ....||+.|+|||++.   ...++.++|||||||++|||++ |+.||......     .....   ....
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-----~~~~~---~~~~  245 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-----QANIL---LGAC  245 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-----HHHHH---TTCC
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-----HHHHH---hccC
Confidence                      1245899999999997   4567889999999999999999 89998643211     11100   0000


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      . .    ..  ..........+.+++..||+.||.+|||+++|++
T Consensus       246 ~-~----~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          246 S-L----DC--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             C-C----TT--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             C-c----cc--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            0 0    00  0112234456788999999999999999999984

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=5.3e-34  Score=295.38  Aligned_cols=239  Identities=15%  Similarity=0.218  Sum_probs=183.2

Q ss_pred             hcCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHH-hhcCCCCeeeeeeeeee----CCeEE
Q 041096          347 TRGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSII-ACLRHKNLVQLLGWCAE----KGELL  420 (645)
Q Consensus       347 ~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~----~~~~~  420 (645)
                      .++|... ++||+|+||.||+|....++..||+|++..    ...+.+|++++ +.++||||+++++++..    ....+
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            3556666 779999999999999998899999999864    34577888887 55689999999999887    66899


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeecccc
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESSFT  497 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~~~  497 (645)
                      +||||+++|+|.+++.....  ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.   ++.+++.|...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            99999999999999987542  348999999999999999999999   99999999999999998   78899987432


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN  577 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  577 (645)
                      .          +...+..++.++|||||||++|||++|+.||...........             ....+... ....+
T Consensus       167 a----------~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------------~~~~~~~~-~~~~~  222 (299)
T 3m2w_A          167 A----------KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------------MKTRIRMG-QYEFP  222 (299)
T ss_dssp             C----------EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------------SCCSSCTT-CCSSC
T ss_pred             c----------cccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------------HHHHHhhc-cccCC
Confidence            1          223346788999999999999999999999976432111000             00000000 00111


Q ss_pred             ----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCCC
Q 041096          578 ----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVV  618 (645)
Q Consensus       578 ----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~~  618 (645)
                          ......+.+++..||+.||.+|||++|+++  .+.+....+..
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~  269 (299)
T 3m2w_A          223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT  269 (299)
T ss_dssp             HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCC
T ss_pred             chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCC
Confidence                123456888999999999999999999998  56655444443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.4e-34  Score=328.02  Aligned_cols=229  Identities=22%  Similarity=0.279  Sum_probs=184.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCe-----
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGE-----  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----  418 (645)
                      .++|+..+.||+|+||.||+|.+.. ++..||||++...  ......+.+|++++.+++||||++++++|...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            3689999999999999999999875 6899999988653  3345678999999999999999999999987665     


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .||||||+++++|.+++..      .++|.+++.++.||++||.|||+   .+|+||||||+||||+.+ .+||.|..  
T Consensus       159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a  228 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAV  228 (681)
T ss_dssp             EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred             eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccc
Confidence            7999999999999987753      38999999999999999999999   999999999999999986 78887732  


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....||++|+|||++.++. +.++|||||||++|||++|..||.........            .         
T Consensus       229 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------~---------  286 (681)
T 2pzi_A          229 SRINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------E---------  286 (681)
T ss_dssp             EETTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------T---------
T ss_pred             hhcccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc------------c---------
Confidence                  3456999999999987654 89999999999999999999887653211100            0         


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHc
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPS-MRRVFQILN  610 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~~vl~~L~  610 (645)
                         ..........+.+++..||+.||.+||+ ++++.+.|.
T Consensus       287 ---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          287 ---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             ---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             ---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence               0000122356788999999999999995 566655554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.3e-34  Score=312.12  Aligned_cols=233  Identities=16%  Similarity=0.102  Sum_probs=175.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCC-CCeeeeeee---------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRH-KNLVQLLGW---------  412 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H-~niv~l~g~---------  412 (645)
                      +++|...++||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.++| +|......+         
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34577788999999999999999989999999988742    2235679999999999987 322111111         


Q ss_pred             ------------eee-----CCeEEEEEecCCCCCHhHHhhhc---CCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 041096          413 ------------CAE-----KGELLLVYEYMPNGSLDRMLYQD---SENGVLLSWYHRLNIVVGLASALTYLHQECEQQV  472 (645)
Q Consensus       413 ------------~~~-----~~~~~lV~Ey~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  472 (645)
                                  +..     ....+++|+++ +++|.+++...   ......+++..++.++.|+++||+|||+   ++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence                        111     12467777766 78999888521   2223458899999999999999999999   999


Q ss_pred             eeCCCCCCcEEEcCCCCeeeeccc---------cccccCCcccCcccc----------cCCCCCcchhHHHHHHHHHHHH
Q 041096          473 IHRDIKASNIMLDANFNARLESSF---------TLTAGTMGYLAPEYL----------QYGTATEKTDVFSYGVVVLEVA  533 (645)
Q Consensus       473 vHrDlkp~NIlld~~~~~kl~d~~---------~~~~gt~~y~APE~~----------~~~~~t~ksDV~SfGvvl~El~  533 (645)
                      +||||||+||||+.++.+||.|..         ...+| +.|+|||++          ....++.++|||||||++|||+
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999998832         23467 999999999          5556889999999999999999


Q ss_pred             cCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 041096          534 CGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF  606 (645)
Q Consensus       534 tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl  606 (645)
                      +|+.||..........                ..+..  ...    .+..+.+++..||+.||++||++.+++
T Consensus       312 tg~~Pf~~~~~~~~~~----------------~~~~~--~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          312 CADLPNTDDAALGGSE----------------WIFRS--CKN----IPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HSSCCCCTTGGGSCSG----------------GGGSS--CCC----CCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HCCCCCCCcchhhhHH----------------HHHhh--ccc----CCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999997643221110                00100  012    235688899999999999999976663

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.98  E-value=1.7e-32  Score=269.73  Aligned_cols=114  Identities=37%  Similarity=0.482  Sum_probs=107.0

Q ss_pred             CcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcce
Q 041096          134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPL  213 (645)
Q Consensus       134 ~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~  213 (645)
                      +|+|||||||++|.+|+||++|||||||||+.|.++.+|     ++.+|+.++|||+||+.+++|+|+|++.+.  ..|+
T Consensus         2 n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNs~~S~~~~~~-----~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~   74 (237)
T 1nls_A            2 DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW-----NMQNGKVGTAHIIYNSVDKRLSAVVSYPNA--DSAT   74 (237)
T ss_dssp             CCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC-----CCCTTCEEEEEEEEETTTTEEEEEEECTTS--CCEE
T ss_pred             CCEEEEEEeCCCCcccCCCCCCeeeEecCCccccccccc-----cccCCCEEEEEEEEeCCCCEEEEEEecCCC--Ccce
Confidence            689999999999999999999999999999999998876     478999999999999999999999997653  6799


Q ss_pred             EEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeecC
Q 041096          214 LKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSG  254 (645)
Q Consensus       214 l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~~  254 (645)
                      |++.|||+++|+|+|||||||+||...|.|+|++|+|++..
T Consensus        75 ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~  115 (237)
T 1nls_A           75 VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             EEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             EEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEecc
Confidence            99999999999999999999999999999999999999874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=1.2e-32  Score=290.03  Aligned_cols=234  Identities=15%  Similarity=0.125  Sum_probs=174.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---------chhHhHHHHHHHHhhcC---------CCCeee
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---------EGKTEFLAELSIIACLR---------HKNLVQ  408 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---------~~~~~~~~Ei~~l~~l~---------H~niv~  408 (645)
                      .++|+..+.||+|+||+||+|+.  ++..||||++....         ...+.+.+|+.++++++         |+||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35688899999999999999998  47999999987532         12367899999999886         555555


Q ss_pred             eee-----------------eeee-------------CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHH
Q 041096          409 LLG-----------------WCAE-------------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA  458 (645)
Q Consensus       409 l~g-----------------~~~~-------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia  458 (645)
                      +.+                 ++.+             .+..||||||+++|++.+.+.+     ..+++.++..++.||+
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT  171 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence            554                 4443             6789999999999987777743     2389999999999999


Q ss_pred             HHHHHHh-hcCCCCeeeCCCCCCcEEEcCCC--------------------Ceeeeccc-------cccccCCcccCccc
Q 041096          459 SALTYLH-QECEQQVIHRDIKASNIMLDANF--------------------NARLESSF-------TLTAGTMGYLAPEY  510 (645)
Q Consensus       459 ~gL~yLH-~~~~~~ivHrDlkp~NIlld~~~--------------------~~kl~d~~-------~~~~gt~~y~APE~  510 (645)
                      .||+||| +   .+|+||||||+||||+.++                    .+||.|..       ...+||+.|+|||+
T Consensus       172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~  248 (336)
T 2vuw_A          172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDL  248 (336)
T ss_dssp             HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGG
T ss_pred             HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhh
Confidence            9999999 8   8999999999999999887                    88998832       23479999999999


Q ss_pred             ccCCCCCcchhHHHHHHH-HHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHH
Q 041096          511 LQYGTATEKTDVFSYGVV-VLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGL  589 (645)
Q Consensus       511 ~~~~~~t~ksDV~SfGvv-l~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  589 (645)
                      +.+.. +.++||||++++ .+++++|..||.....   ...+.+.......       ................+.+++.
T Consensus       249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~s~~~~dli~  317 (336)
T 2vuw_A          249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW---LHYLTDKMLKQMT-------FKTKCNTPAMKQIKRKIQEFHR  317 (336)
T ss_dssp             GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH---HHHHHHHHHHTCC-------CSSCCCSHHHHHHHHHHHHHHH
T ss_pred             hcCCC-ccceehhhhhCCCCcccccccCCCcchhh---hhHHHHhhhhhhc-------cCcccchhhhhhcCHHHHHHHH
Confidence            98766 899999998777 7778889999843100   0001110000000       0000001112346778999999


Q ss_pred             HccCCCCCCCCCHHHHH
Q 041096          590 SCANPDSSARPSMRRVF  606 (645)
Q Consensus       590 ~Cl~~dP~~RPt~~~vl  606 (645)
                      .||+.|     |++|++
T Consensus       318 ~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          318 TMLNFS-----SATDLL  329 (336)
T ss_dssp             HGGGSS-----SHHHHH
T ss_pred             HHhccC-----CHHHHH
Confidence            999866     999988

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.95  E-value=2.8e-28  Score=211.49  Aligned_cols=106  Identities=29%  Similarity=0.606  Sum_probs=93.8

Q ss_pred             CceeEEeCCCC--CCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+.+|.|+||+.+.+   ..+++|||+|++||+|||+ +++++||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~nl~l~G~A~v~~g~l~LT~~~~~g~~~~~s~Gra~Y~~Pv~l~d~-tg~vaSFsT~F~F~I~~~~   80 (113)
T 1qmo_A            2 QSLSFSFTKFDPNQEDLIFQGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED-SAVLTSFDTIINFEISTPY   80 (113)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEEEECSS
T ss_pred             cceEEEcCCCCCCCCCeEEecceEcCCCceEeCCCCCCCcccCCcEEEEEeCCCEEeeCC-CCCEEeeEEEEEEEEecCC
Confidence            45799999998  6899999999998899999997431   1368999999999999999 9999999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCC
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSS  129 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~  129 (645)
                      ...+||||||||+|....+++.||||||+|.+
T Consensus        81 ~~~~gdGlAF~lap~~~~p~s~g~~LGL~n~~  112 (113)
T 1qmo_A           81 TSRIADGLAFFIAPPDSVISYHGGFLGLFPNA  112 (113)
T ss_dssp             SSCCCCEEEEEEECTTCCCCCCGGGTTTCSSC
T ss_pred             CCCCCCeEEEEecCCCCCCCCCccccccccCC
Confidence            77889999999999877555889999999864

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.93  E-value=3.7e-25  Score=221.41  Aligned_cols=187  Identities=19%  Similarity=0.202  Sum_probs=143.4

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.++|+|.+.++.|+||++    .++.|++|.+.|+++       .++|+|+|+|+|.++. ..+||||||++++..
T Consensus        30 i~~w~~~G~a~v~~~~IrLTp~----~~s~G~iW~~~p~~~-------~~~f~~~f~FrI~g~~-~~~gdGlAfwlt~~~   97 (256)
T 2a6y_A           30 PNNWQTGEQASLEEGRIVLTSN----QNSKGSLWLKQGFDL-------KDSFTMEWTFRSVGYS-GQTDGGISFWFVQDS   97 (256)
T ss_dssp             CTTEEEEETCEEETBEEECCCS----TTCEEEEEESSCEEE-------SSCEEEEEEEEEESCC-SCCSCEEEEEEEECS
T ss_pred             cCCeEEccceEEeCCEEEECCC----CCceEEEeeCCCCcc-------cCCEEEEEEEEEecCC-CCCCCeEEEEEeCCC
Confidence            4689999999999999999997    256899877777764       3689999999999764 337999999999976


Q ss_pred             CCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCC------CCeeeeecCCcccccccCCCccccccCCCCeEEE
Q 041096          114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPD------ENHIGLDIDSLESIKTADPILQGIDLKSGNVITA  187 (645)
Q Consensus       114 ~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~------~~Hvgi~vns~~s~~~~~~~~~~~~~~~g~~~~~  187 (645)
                      ..+ ..|+.+|..+     ..+.+||||||+.|.   .|.      +.|+++|.+++.+.....+.. .+ .++|.+.++
T Consensus        98 ~~~-~~g~~~G~~~-----~f~GlaV~fDT~~n~---~p~i~~~~Ndg~~~~d~~~~~~~~~~~c~~-~~-rn~~~~~~v  166 (256)
T 2a6y_A           98 NIP-RDKQLYNGPV-----NYDGLQLLVDNNGPL---GPTLRGQLNDGQKPVDKTKIYDQSFASCLM-GY-QDSSVPSTI  166 (256)
T ss_dssp             SSC-CCCTBTTBCT-----TCEEEEEEEESCSTT---CSEEEEEEEESSSCCCGGGHHHHCSEEEEC-CC-TTCSSCEEE
T ss_pred             Ccc-cCCcccCcCC-----CCCEEEEEEECCCCC---CceEEEEECCCceecccCCCcccceeccee-ec-ccCCCcEEE
Confidence            532 5678888853     356699999999873   343      678888888744443333211 11 147889999


Q ss_pred             EEEec-CCCceEEEEEEeCCCCCCcceEEEeecCCcc-CCCcc-EEeEEeccC---Cccceeeeeeeeeeec
Q 041096          188 WIDYK-NDLRMLKVFMSYSNLKPVTPLLKVNIDLSGY-LKGNM-YVGFSASTE---GSTELHMIQSWSFQTS  253 (645)
Q Consensus       188 ~I~Y~-~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~-l~~~~-~vGfsastg---~~~~~~~i~sw~f~~~  253 (645)
                      ||.|+ +..+.|+|.+.+      ..++    ++..+ ||+++ ||||||+||   ...+.|.|++|+|...
T Consensus       167 ~I~Y~~~~~~~L~V~i~~------~~c~----~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIls~~~~~~  228 (256)
T 2a6y_A          167 RVTYDLEDDNLLKVQVDN------KVCF----QTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNG  228 (256)
T ss_dssp             EEEEEGGGTSEEEEEETT------EEEE----EESCEECCSEEEEEEEEEECCSGGGCCCEEEEEEEEEEES
T ss_pred             EEEEecCCCcEEEEEEcC------EEEE----EECcEEeCCCCeEEEEEEeCCCCCCCcceEEEEEEEEEec
Confidence            99999 878899999954      2233    34444 78887 699999999   7899999999999984

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.92  E-value=4.2e-26  Score=256.49  Aligned_cols=172  Identities=20%  Similarity=0.076  Sum_probs=121.6

Q ss_pred             eccCCceEEEEEEECCCCeEEEEEeccCC-----------cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEEE
Q 041096          356 LGRGAFGNVYKAYFASSGSVAAVKRSKHS-----------HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       356 lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-----------~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .+.|++|.+..+...-.|+.+++|.+...           ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            45555655555444444788999987652           12346799999999999 6999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||++|++|.++|.....    ++..   +|+.||+.||+|||+   ++|+||||||+||||+.++.+||.|..       
T Consensus       322 Eyv~G~~L~d~i~~~~~----l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGEE----IDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             ECCCSEEHHHHHHTTCC----CCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             ecCCCCcHHHHHHhCCC----CCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            99999999999976543    5553   589999999999999   999999999999999999999998832       


Q ss_pred             -----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC
Q 041096          497 -----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP  538 (645)
Q Consensus       497 -----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P  538 (645)
                           ...+||++|||||.+.+ .+..++|+||+|++++++.++..+
T Consensus       392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence                 22468999999999875 467789999999998887665444

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.89  E-value=2.3e-23  Score=204.79  Aligned_cols=105  Identities=34%  Similarity=0.575  Sum_probs=90.7

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      ..++|.|+.|.  ..||+|+|||.+ .+|.|+||+.+.+   ..+++|||+|++||+|||+ +++++||+|+|+|.|.+.
T Consensus       124 ~~~~F~~~~F~~~~~nl~l~G~A~v~~~g~l~LT~~~~n~~~~~~~~Gra~Y~~Pv~lwd~-~~~vaSFsT~F~F~I~~~  202 (237)
T 1nls_A          124 NALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKSP  202 (237)
T ss_dssp             EEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCCS
T ss_pred             ccchhhhccccccCCCeEEccceEecCCCceEecCCccCCccccCceEEEEeCCCEEeecC-CCCEeeeEEEEEEEEecC
Confidence            45799999998  469999999999 5899999997521   2468999999999999997 889999999999999986


Q ss_pred             CCCCCCCceEEEEecCCC--CCCCCCCccccccCC
Q 041096           97 NPSSFGDGLAFFISPDNQ--ILGSAGGCLGLVNSS  129 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~--~~~~~g~~lGl~~~~  129 (645)
                      . ..+||||||||+|...  +.+++||||||+|.+
T Consensus       203 ~-~~~g~GlAF~lap~~~~~p~~~~g~~LGL~n~~  236 (237)
T 1nls_A          203 D-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             S-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             C-CCCCccEEEEECCCCCCCCCCCCcCeeccccCC
Confidence            4 4689999999999874  457899999999865

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=6.9e-24  Score=237.06  Aligned_cols=171  Identities=13%  Similarity=0.143  Sum_probs=136.3

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---------chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---------EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ...++||+|+||.||+|...  +..+++|+.....         ...+.+.+|++++++++||||+++..++...++.+|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            44678999999999999554  6778888654311         113458999999999999999977777777778899


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+++++|.+++..            +..++.|+++||+|||+   ++|+||||||+|||++.  .+||.|..     
T Consensus       417 VmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          417 MMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             EEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             EEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence            9999999999999965            35799999999999999   99999999999999998  89998721     


Q ss_pred             --------------cccccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 041096          497 --------------TLTAGTMGYLAPEYLQY--GTATEKTDVFSYGVVVLEVACGRRPIE  540 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~--~~~t~ksDV~SfGvvl~El~tG~~P~~  540 (645)
                                    ....||+.|||||++..  ..|+.++|+||..+-.++-+.++.+|.
T Consensus       480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence                          23468999999999986  668889999999999999888877663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.83  E-value=1.2e-20  Score=193.47  Aligned_cols=151  Identities=14%  Similarity=0.124  Sum_probs=121.6

Q ss_pred             HHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------------------chhHhHHHHHHHHhhc
Q 041096          341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------------------EGKTEFLAELSIIACL  401 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------------------~~~~~~~~Ei~~l~~l  401 (645)
                      ..+......|...+.||+|+||.||+|.. .++..||+|.+....                   .....+.+|+++++++
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            34444455677779999999999999999 679999999986422                   1345689999999999


Q ss_pred             CCCCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 041096          402 RHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASN  481 (645)
Q Consensus       402 ~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  481 (645)
                      +  | +++.+++.. +..++||||+++++|.+ +..          .....++.|+++||+|||+   .+|+||||||+|
T Consensus       162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~N  223 (282)
T 1zar_A          162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYN  223 (282)
T ss_dssp             T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTS
T ss_pred             c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHH
Confidence            9  5 677775544 45699999999999998 521          1234699999999999999   999999999999


Q ss_pred             EEEcCCCCeeeeccccccccCCcccCccccc
Q 041096          482 IMLDANFNARLESSFTLTAGTMGYLAPEYLQ  512 (645)
Q Consensus       482 Illd~~~~~kl~d~~~~~~gt~~y~APE~~~  512 (645)
                      |||+ ++.++|.| ++....+..++|||++.
T Consensus       224 ILl~-~~~vkl~D-FG~a~~~~~~~a~e~l~  252 (282)
T 1zar_A          224 VLVS-EEGIWIID-FPQSVEVGEEGWREILE  252 (282)
T ss_dssp             EEEE-TTEEEECC-CTTCEETTSTTHHHHHH
T ss_pred             EEEE-CCcEEEEE-CCCCeECCCCCHHHHHH
Confidence            9999 99999977 45566778899999875

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.75  E-value=2.4e-17  Score=161.34  Aligned_cols=185  Identities=17%  Similarity=0.180  Sum_probs=129.2

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|+|.+.++.|+||++   . ++.|.+|.+.|+++.+       +|+++|+|+|..+. ..+||||||.+++..
T Consensus        23 ~~~W~~~G~a~i~~~~IrLTp~---~-~~~G~iWs~~p~~~~~-------~weie~~Fri~g~~-~~~gdGlA~W~t~~~   90 (222)
T 2a6z_A           23 PNNWQTGEQASLEEGRIVLTSN---Q-NSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYS-GQTDGGISFWFVQDS   90 (222)
T ss_dssp             CTTEEEEETCEEETTEEESCCS---T-TCEEEEEESSCEECCS-------CEEEEEEEEEESCC-SCCSCEEEEEEEECS
T ss_pred             cCCcEEcccEEEcCCEEEECCC---C-CCeEEEEeCCCCCCCC-------CEEEEEEEEEeCCC-CCCCCEEEEEEECCC
Confidence            4689999999999999999997   2 4589999999998643       69999999999764 347999999999875


Q ss_pred             CCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcc-cccc-----cCCCcccccc-CCCCeEE
Q 041096          114 QILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLE-SIKT-----ADPILQGIDL-KSGNVIT  186 (645)
Q Consensus       114 ~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~-s~~~-----~~~~~~~~~~-~~g~~~~  186 (645)
                      .. ...|..+|..     ....-+||+|||+.|.      ..+|.+.+|.-. +-..     .....-.... +.+.+.+
T Consensus        91 ~~-~~~g~~~G~~-----~~f~GL~I~~Dt~~n~------~p~i~~~~ndG~~~yd~~~~~~~~~~~C~~~~rn~~~~~~  158 (222)
T 2a6z_A           91 NI-PRDKQLYNGP-----VNYDGLQLLVDNNGPL------GPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPST  158 (222)
T ss_dssp             SS-CCCCTBTTBC-----TTCEEEEEEEESCSTT------SSEEEEEEEESSSCCCGGGHHHHCSEEEECCCTTEEEEEE
T ss_pred             cc-cCCCcccCCC-----CCCCEEEEEEECCCCC------CceEEEEECCCCeeeccCCCccccccccceeccCCCCcEE
Confidence            42 1245555552     2344579999998773      245655543321 1000     1111000112 3567899


Q ss_pred             EEEEec-CCCceEEEEEEeCCCCCCcceEEEe-ecCCccCCCc-cEEeEEeccC---Cccceeeeeeeeeee
Q 041096          187 AWIDYK-NDLRMLKVFMSYSNLKPVTPLLKVN-IDLSGYLKGN-MYVGFSASTE---GSTELHMIQSWSFQT  252 (645)
Q Consensus       187 ~~I~Y~-~~~~~l~v~~~~~~~~~~~~~l~~~-vdl~~~l~~~-~~vGfsastg---~~~~~~~i~sw~f~~  252 (645)
                      ++|.|+ ...+.|+|.++.      ..|+... |+    ||.. .|+||||+||   ...+.|.|++|++..
T Consensus       159 ~rI~Y~~~~~~~l~v~id~------~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hdil~~~~~~  220 (222)
T 2a6z_A          159 IRVTYDLEDDNLLKVQVDN------KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFN  220 (222)
T ss_dssp             EEEEEEGGGTSEEEEEETT------EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEEEEEEEEEE
T ss_pred             EEEEEEcCCCcEEEEEEcC------eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEEEEEEEEEc
Confidence            999998 667788888842      3343332 33    4555 4799999999   788999999999854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.64  E-value=2.1e-16  Score=159.70  Aligned_cols=130  Identities=16%  Similarity=0.128  Sum_probs=99.6

Q ss_pred             CCcCceeccCCceEEEEEEECCCCeE--EEEEeccCCcch-------------------------hHhHHHHHHHHhhcC
Q 041096          350 FHSNRILGRGAFGNVYKAYFASSGSV--AAVKRSKHSHEG-------------------------KTEFLAELSIIACLR  402 (645)
Q Consensus       350 f~~~~~lG~G~fg~Vy~g~~~~~~~~--vavK~~~~~~~~-------------------------~~~~~~Ei~~l~~l~  402 (645)
                      |...+.||+|+||.||+|....+|..  ||||+++.....                         ...+.+|+..+.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            55678999999999999998556888  999986542111                         136889999999998


Q ss_pred             CCCe--eeeeeeeeeCCeEEEEEecCCC-C----CHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHh-hcCCCCeee
Q 041096          403 HKNL--VQLLGWCAEKGELLLVYEYMPN-G----SLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH-QECEQQVIH  474 (645)
Q Consensus       403 H~ni--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH  474 (645)
                      |+++  ...+++    +..+|||||+.+ |    +|.++...       .++.....++.|++.||.||| +   .+|+|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~---~givH  194 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQE---AELVH  194 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHT---SCEEC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHH---CCEEe
Confidence            8764  333332    246899999942 4    67666432       223456789999999999999 7   99999


Q ss_pred             CCCCCCcEEEcCCCCeeeecc
Q 041096          475 RDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       475 rDlkp~NIlld~~~~~kl~d~  495 (645)
                      |||||+|||++.  .+++.|.
T Consensus       195 rDlkp~NILl~~--~~~liDF  213 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDM  213 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCC
T ss_pred             CCCCHHHEEEcC--cEEEEEC
Confidence            999999999998  8888774

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.50  E-value=1.8e-14  Score=152.35  Aligned_cols=127  Identities=11%  Similarity=0.094  Sum_probs=87.4

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc---------------hhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE---------------GKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~---------------~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      -|++.+.||+|++|.||+|... +|..||||+++....               .......++++.....|+|+++++...
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3888999999999999999986 488999998653211               011222333333333344444443221


Q ss_pred             eeC------CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC
Q 041096          414 AEK------GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN  487 (645)
Q Consensus       414 ~~~------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~  487 (645)
                      ...      ...+|||||+++++|..+...          .....++.|++.+|.|||+   .+||||||||.||||+.+
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCC
Confidence            111      123799999999888765421          1234678999999999999   899999999999999887


Q ss_pred             CC
Q 041096          488 FN  489 (645)
Q Consensus       488 ~~  489 (645)
                      +.
T Consensus       242 gd  243 (397)
T 4gyi_A          242 KD  243 (397)
T ss_dssp             EC
T ss_pred             CC
Confidence            63

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.44  E-value=4.1e-14  Score=103.49  Aligned_cols=44  Identities=27%  Similarity=0.388  Sum_probs=41.5

Q ss_pred             cceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeecC
Q 041096          211 TPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSG  254 (645)
Q Consensus       211 ~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~~  254 (645)
                      .|+|+.++||+++|+|+|||||||+||...|.|+|++|+|++..
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~   46 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL   46 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEE
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeec
Confidence            47899999999999999999999999999999999999999864

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.40  E-value=1.7e-11  Score=119.27  Aligned_cols=184  Identities=19%  Similarity=0.197  Sum_probs=122.9

Q ss_pred             CCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCCC
Q 041096           35 RNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQ  114 (645)
Q Consensus        35 ~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~~  114 (645)
                      .++.+.|+|.+.++.|+||++    +++.|.+|-+.|+.+-       .+|+.+|+|+|+.... .+||||||.++....
T Consensus        27 ~~W~~~G~t~v~~~~IrLTp~----~s~~G~lWs~~p~~~~-------~~weiev~Fri~G~~~-~~gdGlA~Wyt~~~~   94 (226)
T 2a6v_A           27 SQWTLGDKVKLEEGRFVLTPG----KNTKGSLWLKPEYSIK-------DAMTIEWTFRSFGFRG-STKGGLAFWLKQGNE   94 (226)
T ss_dssp             TTEEEEETCEEETTEEESCCS----TTCEEEEEESSCBCCS-------SCEEEEEEEEEESCCS-CCSCEEEEEEECSCC
T ss_pred             CCcEEcCCeEEeCCEEEECCC----CCceEEEeeCCCCCCC-------CCeEEEEEEEEecCCC-CCCCEEEEEEECCCC
Confidence            689999999999999999997    4689999999999861       2599999999997653 379999999997543


Q ss_pred             CCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCc-cccccc-CCCccc--cc-cCCCCeEEEEE
Q 041096          115 ILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSL-ESIKTA-DPILQG--ID-LKSGNVITAWI  189 (645)
Q Consensus       115 ~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~-~s~~~~-~~~~~~--~~-~~~g~~~~~~I  189 (645)
                      .  ..|..+|-.    .....-+||.|||+.|.      ...|.+-+|.- .+-... .....+  .. .+.+.+.+++|
T Consensus        95 ~--~~g~vfGg~----~d~f~GlgI~~Dt~~n~------~p~i~~~~NDGt~~yd~~~~~~~g~C~~~~rn~~~~t~~ri  162 (226)
T 2a6v_A           95 G--DSTELFGGS----SKKFNGLMILLRLDDKL------GESVTAYLNDGTKDLDIESSPYFASCLFQYQDSMVPSTLRL  162 (226)
T ss_dssp             C--CCCTBTTTB----CSSCEEEEEEEEEETTT------EEEEEEEEEESSSCCCTTTSCCSEEEECCCSSCSSCEEEEE
T ss_pred             C--CCccccccc----CCCccEEEEEEECCCCC------CceEEEEECCCCcccCCCCCcccceEeEeccCCCCCEEEEE
Confidence            2  233333210    11234589999998762      12233333221 111111 111111  11 24567889999


Q ss_pred             Eec-CCCceEEEEEEeCCCCCCcceEEE-eecCCccCCCc--cEEeEEeccCCccceeeeeeeeeee
Q 041096          190 DYK-NDLRMLKVFMSYSNLKPVTPLLKV-NIDLSGYLKGN--MYVGFSASTEGSTELHMIQSWSFQT  252 (645)
Q Consensus       190 ~Y~-~~~~~l~v~~~~~~~~~~~~~l~~-~vdl~~~l~~~--~~vGfsastg~~~~~~~i~sw~f~~  252 (645)
                      .|. ...+.|+|.++.      ..|+.. .|+    ||..  +|+||||+||...+.|.|++..+-.
T Consensus       163 ~Y~~~~~~~l~v~id~------~~Cf~~~~v~----LP~g~~~yfGiSAaTg~~~D~hdils~~~~~  219 (226)
T 2a6v_A          163 TYNPLDNHLLKLQMDN------RVCFQTRKVK----FMGSSPFRIGTSAINDASKESFEILKMKLYD  219 (226)
T ss_dssp             EEEGGGTSEEEEEETT------EEEEEESCCC----GGGTSCBEEEEEEECCTTCCEEEEEEEEEES
T ss_pred             EEEccCCCEEEEEEcC------CeeEEECCee----cCCCCccEEEEEEcCCCCcccEEEEEEEEEe
Confidence            996 446789998842      234442 133    3444  4999999999999999999987643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.13  E-value=2e-10  Score=115.59  Aligned_cols=143  Identities=14%  Similarity=0.053  Sum_probs=110.1

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeE
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~  419 (645)
                      .+.....+|.....++.|+.+.||+....  +..+++|+..... .....+.+|+++++.+. |.++.++++++.+.+..
T Consensus         8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~   85 (263)
T 3tm0_A            8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence            34555678888888898999999999754  5789999876421 23446899999999995 67788999999988899


Q ss_pred             EEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhc--------------------------------
Q 041096          420 LLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE--------------------------------  467 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------  467 (645)
                      |+||||++|.+|.+.+..         ..+...++.+++++|+.||+.                                
T Consensus        86 ~lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             EEEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred             EEEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence            999999999999876421         112346889999999999981                                


Q ss_pred             ------------------------CCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          468 ------------------------CEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       468 ------------------------~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                                              ....++|+|+++.|||++.+....+.|.
T Consensus       157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDw  208 (263)
T 3tm0_A          157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDL  208 (263)
T ss_dssp             GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCC
T ss_pred             cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEc
Confidence                                    0145899999999999987544456563

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.89  E-value=2.5e-09  Score=106.83  Aligned_cols=134  Identities=19%  Similarity=0.149  Sum_probs=94.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E  424 (645)
                      ..++....+.+.|..+.||+.... +|..+++|.....  ....+.+|+.+++.+++.+  +.++++++..++..++|||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             cCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            344544333345566999999764 4667899987653  3356889999999996544  4568888888788999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC------------------------------------  468 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------  468 (645)
                      |+++.+|.  ...       ..   ...++.++++.|+.||+..                                    
T Consensus        96 ~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           96 EVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             CCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             ecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            99998884  211       11   1256778888888888621                                    


Q ss_pred             -------------------CCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          469 -------------------EQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       469 -------------------~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                                         ...++|+|++|.|||++.+....+.|.
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~  209 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDC  209 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCC
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcc
Confidence                               122999999999999987654556563

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.74  E-value=3.3e-08  Score=104.14  Aligned_cols=134  Identities=13%  Similarity=0.205  Sum_probs=100.2

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEecc--CCc--chhHhHHHHHHHHhhcC--CCCeeeeeeeeeeC---CeEEEEE
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSK--HSH--EGKTEFLAELSIIACLR--HKNLVQLLGWCAEK---GELLLVY  423 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~--~~~--~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~---~~~~lV~  423 (645)
                      .+.|+.|.++.||+....  +..+++|+..  ...  .....+.+|+.+++.|.  +..+.++++++.+.   +..++||
T Consensus        43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            467899999999999875  4577888776  322  23457889999999997  45688899988776   4589999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC-----------------------------------  468 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----------------------------------  468 (645)
                      ||+++..+.+...      ..++..++..++.++++.|+.||+..                                   
T Consensus       121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            9999988754211      12678888999999999999999721                                   


Q ss_pred             --------------------CCCeeeCCCCCCcEEEcCCCC--eeeec
Q 041096          469 --------------------EQQVIHRDIKASNIMLDANFN--ARLES  494 (645)
Q Consensus       469 --------------------~~~ivHrDlkp~NIlld~~~~--~kl~d  494 (645)
                                          ...++|+|+++.|||++.+..  ..+.|
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viD  242 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLD  242 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECC
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEEC
Confidence                                257999999999999997754  35656

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.57  E-value=8.6e-08  Score=98.52  Aligned_cols=176  Identities=16%  Similarity=0.137  Sum_probs=116.6

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCC--eeeeeeeeeeCC---eEEEEEecC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKN--LVQLLGWCAEKG---ELLLVYEYM  426 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~Ey~  426 (645)
                      .+.++.|....||+..     ..+++|+... ......+.+|.++++.+. +..  +.+.+.++...+   ..|+|||++
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            3568999999999863     3577887543 234567889999999884 322  344555544333   348899999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE---------------------------------------  467 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------  467 (645)
                      +|.+|......      .++..++..++.++++.|+.||+.                                       
T Consensus        99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            99888754331      167777888888888888888861                                       


Q ss_pred             ----------------CCCCeeeCCCCCCcEEEcCC--CCeeeeccccccccCC--------cc---cCcccccC-----
Q 041096          468 ----------------CEQQVIHRDIKASNIMLDAN--FNARLESSFTLTAGTM--------GY---LAPEYLQY-----  513 (645)
Q Consensus       468 ----------------~~~~ivHrDlkp~NIlld~~--~~~kl~d~~~~~~gt~--------~y---~APE~~~~-----  513 (645)
                                      ....++|+|+++.||+++.+  ....+.|......|.+        .+   ..|+....     
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y  252 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY  252 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence                            02458999999999999984  4455656333333322        11   23332210     


Q ss_pred             CCCC---------cchhHHHHHHHHHHHHcCCCCCC
Q 041096          514 GTAT---------EKTDVFSYGVVVLEVACGRRPIE  540 (645)
Q Consensus       514 ~~~t---------~ksDV~SfGvvl~El~tG~~P~~  540 (645)
                      +..+         ...+.|+++.++|++.+|..+|.
T Consensus       253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            1111         12689999999999999987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.09  E-value=1.4e-05  Score=80.04  Aligned_cols=130  Identities=20%  Similarity=0.187  Sum_probs=91.6

Q ss_pred             eeccCCce-EEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEecCCCCCHh
Q 041096          355 ILGRGAFG-NVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLD  432 (645)
Q Consensus       355 ~lG~G~fg-~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  432 (645)
                      .+..|..| .||+.....++..+++|+....  ...++.+|...|+.|. +--+.++++++.+.+..++|||++++.++.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            34455555 6999887777778899976542  3456888999999885 434677889999999999999999998887


Q ss_pred             HHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 041096          433 RMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC--------------------------------------------  468 (645)
Q Consensus       433 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------  468 (645)
                      +......        .....+..+++..|+-||...                                            
T Consensus       109 ~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          109 QVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             HHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             ccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            7653221        122345566666666666420                                            


Q ss_pred             -----------CCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          469 -----------EQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       469 -----------~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                                 ...++|+|+.+.|||++.+...-+.|
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viD  217 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCID  217 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECC
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEE
Confidence                       12379999999999998765444555

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.99  E-value=3.8e-05  Score=78.84  Aligned_cols=102  Identities=18%  Similarity=0.126  Sum_probs=65.9

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCC---Ceeeeeeeee-eCCeEEEEEecCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHK---NLVQLLGWCA-EKGELLLVYEYMPN  428 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~-~~~~~~lV~Ey~~~  428 (645)
                      .+.++.|....||+.     +..+++|+.. .......+.+|.++|..|.+.   .+.+.+.++. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            356788888899987     3557778743 233456789999999999753   3556666664 34567899999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhh
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ  466 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~  466 (645)
                      .+|.......      ++..++..++.++++.|+.||+
T Consensus        98 ~~l~~~~~~~------l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           98 QILGEDGMAV------LPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             EECHHHHHTT------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eECchhhhhh------CCHHHHHHHHHHHHHHHHHHhc
Confidence            8887632110      3344444445555555555543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.60  E-value=0.00017  Score=76.64  Aligned_cols=75  Identities=12%  Similarity=0.055  Sum_probs=48.9

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCc--------chhHhHHHHHHHHhhcCC--CC-eeeeeeeeeeCCeEEE
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH--------EGKTEFLAELSIIACLRH--KN-LVQLLGWCAEKGELLL  421 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~Ei~~l~~l~H--~n-iv~l~g~~~~~~~~~l  421 (645)
                      .+.||.|..+.||++....++..++||......        .....+..|.+++..+..  +. +.+++.+.  .+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence            457899999999999776556789999754311        123456789888888742  33 34555443  344689


Q ss_pred             EEecCCCC
Q 041096          422 VYEYMPNG  429 (645)
Q Consensus       422 V~Ey~~~g  429 (645)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.59  E-value=0.00014  Score=75.99  Aligned_cols=80  Identities=5%  Similarity=-0.025  Sum_probs=56.1

Q ss_pred             cee-ccCCceEEEEEEEC---C---CCeEEEEEeccCCc---c-hhHhHHHHHHHHhhcC-C--CCeeeeeeeeeeC---
Q 041096          354 RIL-GRGAFGNVYKAYFA---S---SGSVAAVKRSKHSH---E-GKTEFLAELSIIACLR-H--KNLVQLLGWCAEK---  416 (645)
Q Consensus       354 ~~l-G~G~fg~Vy~g~~~---~---~~~~vavK~~~~~~---~-~~~~~~~Ei~~l~~l~-H--~niv~l~g~~~~~---  416 (645)
                      +.| +.|....+|+....   +   ++..+++|+.....   . ....+.+|+.+++.|. +  -.+.++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            557 78888999998764   1   14678888765422   1 2356788999998885 3  3567788887665   


Q ss_pred             CeEEEEEecCCCCCHhH
Q 041096          417 GELLLVYEYMPNGSLDR  433 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~  433 (645)
                      +..++||||+++..+.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            35689999999877653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.47  E-value=0.0013  Score=67.72  Aligned_cols=73  Identities=15%  Similarity=0.265  Sum_probs=42.4

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC--CCeeeeee------eeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH--KNLVQLLG------WCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g------~~~~~~~~~lV~Ey  425 (645)
                      +.|+.|..+.||+....  +..+++|+.....   .....|..++..|..  -.+.+++.      +....+..+++|||
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            34666778899999875  3458899887532   334455565555531  12333333      12345678999999


Q ss_pred             CCCCCH
Q 041096          426 MPNGSL  431 (645)
Q Consensus       426 ~~~gsL  431 (645)
                      +++..+
T Consensus       113 i~G~~~  118 (346)
T 2q83_A          113 IEGRPF  118 (346)
T ss_dssp             CCCBCC
T ss_pred             ecCccC
Confidence            998654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.22  E-value=0.0013  Score=67.45  Aligned_cols=75  Identities=20%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC---CCCeeeeeeeeeeCCeEEEEEecCCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR---HKNLVQLLGWCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~g  429 (645)
                      .+.|+.|....+|+....  +..+++|+....  ....+..|.+.|+.|.   ...+.+.++++...+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDE--VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEESS--SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEEC--CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            456899999999998763  567888876542  3567889999998884   356888888888888899999999987


Q ss_pred             CH
Q 041096          430 SL  431 (645)
Q Consensus       430 sL  431 (645)
                      .+
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.79  E-value=0.009  Score=60.15  Aligned_cols=78  Identities=19%  Similarity=0.188  Sum_probs=55.0

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCC---CeeeeeeeeeeCCeEEEEEe
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHK---NLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~lV~E  424 (645)
                      .....+.+|.|..+.||+.++.+ |+.+++|+..... .....|..|...|+.|.-.   -+.+++++.    .-++|||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CeEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            34456779999999999999875 7788999865432 2344678999999988522   344455543    2378999


Q ss_pred             cCCCCCH
Q 041096          425 YMPNGSL  431 (645)
Q Consensus       425 y~~~gsL  431 (645)
                      |++.+..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.65  E-value=0.0061  Score=65.09  Aligned_cols=67  Identities=13%  Similarity=0.129  Sum_probs=43.9

Q ss_pred             CCCeeeCCCCCCcEEEcCCCCeeeeccccccccC-------------CcccCcccccCC---CCCcchhHHHHHHHHHHH
Q 041096          469 EQQVIHRDIKASNIMLDANFNARLESSFTLTAGT-------------MGYLAPEYLQYG---TATEKTDVFSYGVVVLEV  532 (645)
Q Consensus       469 ~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt-------------~~y~APE~~~~~---~~t~ksDV~SfGvvl~El  532 (645)
                      ...++|+|+++.|||++.+. ..+.|......|.             ..|++|+.....   ......++......+|+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            47899999999999999876 7777743333332             235666655321   112345666888888887


Q ss_pred             HcCC
Q 041096          533 ACGR  536 (645)
Q Consensus       533 ~tG~  536 (645)
                      ++++
T Consensus       310 y~~~  313 (420)
T 2pyw_A          310 FNKR  313 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.42  E-value=0.047  Score=52.22  Aligned_cols=104  Identities=15%  Similarity=0.044  Sum_probs=68.1

Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccccccccCCcccC
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTLTAGTMGYLA  507 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~~~~~gt~~y~A  507 (645)
                      .-||.++|.....   ++...+++.++.|.+++|.-+-... .. ..+=+.|..|+|..+|++........ .....+.|
T Consensus        32 ~vSL~eIL~~~~~---PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~~~s~-~~~~~~~~  105 (229)
T 2yle_A           32 ALSLEEILRLYNQ---PINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAPAADD-AGEPPPVA  105 (229)
T ss_dssp             EEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECCC------------
T ss_pred             cccHHHHHHHcCC---CcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccccccc-ccccCCCC
Confidence            3479999987654   4999999999999999987762100 11 12234468999999999988653321 23345778


Q ss_pred             cccccCCCCCcchhHHHHHHHHHHHHcCCCC
Q 041096          508 PEYLQYGTATEKTDVFSYGVVVLEVACGRRP  538 (645)
Q Consensus       508 PE~~~~~~~t~ksDV~SfGvvl~El~tG~~P  538 (645)
                      ||... ...+.+.=|||+|+++|.-+-=..|
T Consensus       106 pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          106 GKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             -CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             hhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence            88763 3557899999999999998864433

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.33  E-value=0.0069  Score=61.47  Aligned_cols=71  Identities=11%  Similarity=0.027  Sum_probs=44.5

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEecC-CCCC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEYM-PNGS  430 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~-~~gs  430 (645)
                      .+.|+.|....+|+.      ..+++|+............+|...++.+....+ .++++++.+  .-++++||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence            567888999999998      346788766532222334578888777753222 455555433  347899999 6555


Q ss_pred             H
Q 041096          431 L  431 (645)
Q Consensus       431 L  431 (645)
                      |
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.32  E-value=0.016  Score=59.10  Aligned_cols=156  Identities=14%  Similarity=0.141  Sum_probs=85.4

Q ss_pred             ccCHHHHHHHhcCCCcC-----ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eeee
Q 041096          337 EFSYRELRSATRGFHSN-----RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQL  409 (645)
Q Consensus       337 ~~~~~~l~~~~~~f~~~-----~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l  409 (645)
                      .++.+++......|...     +.|+.|....+|+....+ + .+++|..... .....+..|+.++..|....  +.++
T Consensus         6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            35566777777767652     346678888999998753 3 5788887652 22345667888877774222  2333


Q ss_pred             eee------eeeCCeEEEEEecCCCCCHhH--------------HhhhcCC----CC----ccCCHHHHHH---------
Q 041096          410 LGW------CAEKGELLLVYEYMPNGSLDR--------------MLYQDSE----NG----VLLSWYHRLN---------  452 (645)
Q Consensus       410 ~g~------~~~~~~~~lV~Ey~~~gsL~~--------------~l~~~~~----~~----~~l~~~~~~~---------  452 (645)
                      +..      ....+..+++++|+++..+..              .++....    ..    ....|...+.         
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            321      122356799999998865421              1121110    00    0112433111         


Q ss_pred             ---HHHHHHHHHHHHhhc----CCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          453 ---IVVGLASALTYLHQE----CEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       453 ---i~~~ia~gL~yLH~~----~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                         +...+.+.++.+++.    ....++|+|+.+.|||++.+....+.|.
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf  212 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDF  212 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCC
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecc
Confidence               011244455666532    2357999999999999987644445553

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.03  E-value=0.12  Score=52.49  Aligned_cols=94  Identities=12%  Similarity=0.047  Sum_probs=57.8

Q ss_pred             cccCHHHHHHHhcCCCc-----CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC--eee
Q 041096          336 REFSYRELRSATRGFHS-----NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN--LVQ  408 (645)
Q Consensus       336 ~~~~~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~  408 (645)
                      ...+.+++..+...|..     ...++ |....||+....+ |..+++|...........+..|..++..|....  +.+
T Consensus         9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~   86 (328)
T 1zyl_A            9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDED-RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAA   86 (328)
T ss_dssp             CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTT-CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred             CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCC-CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecc
Confidence            34455566555544432     23466 7788999886643 557889988643334556777888888774222  344


Q ss_pred             eeee-----eeeCCeEEEEEecCCCCCH
Q 041096          409 LLGW-----CAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       409 l~g~-----~~~~~~~~lV~Ey~~~gsL  431 (645)
                      ++..     ....+..+++|||+++..+
T Consensus        87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~  114 (328)
T 1zyl_A           87 PVAFNGQTLLNHQGFYFAVFPSVGGRQF  114 (328)
T ss_dssp             CCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred             eeecCCcEEEEECCEEEEEEEecCCCCC
Confidence            4433     1224567899999987543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.01  E-value=0.01  Score=63.70  Aligned_cols=73  Identities=18%  Similarity=0.260  Sum_probs=50.0

Q ss_pred             ceeccCCceEEEEEEECC-------CCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFAS-------SGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.|+.|....+|+.....       .+..+++|+.... .....+..|..++..|...++ .++++.+.+    .+|+||
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~  153 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY  153 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence            457888889999998753       2467888887432 112456689999988853333 566776543    289999


Q ss_pred             CCCCCH
Q 041096          426 MPNGSL  431 (645)
Q Consensus       426 ~~~gsL  431 (645)
                      +++.+|
T Consensus       154 l~G~~l  159 (429)
T 1nw1_A          154 IPSRPL  159 (429)
T ss_dssp             CCEEEC
T ss_pred             eCCccc
Confidence            986444

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.99  E-value=0.02  Score=61.90  Aligned_cols=75  Identities=16%  Similarity=0.094  Sum_probs=49.2

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      .+.|+.|-...+|+....+.+..+++|+........-+..+|..++..|...++ .++++.+..    .+||||+++.+|
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l  188 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL  188 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence            356888888999999886545788898875422222223689999998865444 467776632    259999987554

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.96  E-value=0.012  Score=61.82  Aligned_cols=137  Identities=15%  Similarity=0.115  Sum_probs=76.7

Q ss_pred             ceeccCCceEEEEEEECC-------CCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFAS-------SGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~-------~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.|..|-...+|+....+       .+..+++|+............+|..+++.|. +.-..++++++.++    +||||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e~  131 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQY  131 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEEC
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEEE
Confidence            456667778899988742       3467889886443334556778999998885 33335667666542    99999


Q ss_pred             CCCCCHhHH-----------------hhhcC-CCCccC--CHHHHHHHHHHHH-------------------HHHHHHhh
Q 041096          426 MPNGSLDRM-----------------LYQDS-ENGVLL--SWYHRLNIVVGLA-------------------SALTYLHQ  466 (645)
Q Consensus       426 ~~~gsL~~~-----------------l~~~~-~~~~~l--~~~~~~~i~~~ia-------------------~gL~yLH~  466 (645)
                      +++.+|..-                 |+.-. ......  -|.+..+...++.                   ..+..|.+
T Consensus       132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~  211 (379)
T 3feg_A          132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK  211 (379)
T ss_dssp             CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred             ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence            988665321                 11111 001112  2444444443332                   12333332


Q ss_pred             -----cCCCCeeeCCCCCCcEEEcCC----CCeeeec
Q 041096          467 -----ECEQQVIHRDIKASNIMLDAN----FNARLES  494 (645)
Q Consensus       467 -----~~~~~ivHrDlkp~NIlld~~----~~~kl~d  494 (645)
                           .....++|+|+.+.|||++.+    ....+.|
T Consensus       212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~ID  248 (379)
T 3feg_A          212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVD  248 (379)
T ss_dssp             HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECC
T ss_pred             HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEe
Confidence                 123568999999999999876    4555555

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.55  E-value=0.024  Score=59.25  Aligned_cols=74  Identities=9%  Similarity=0.104  Sum_probs=44.8

Q ss_pred             ceeccCCceEEEEEEECCC--------CeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEe
Q 041096          354 RILGRGAFGNVYKAYFASS--------GSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~--------~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E  424 (645)
                      +.|+.|..-.+|+....+.        +..+++|+.........+...|..+++.|...++ .++++..  .  -++|||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e  114 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE  114 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence            4577787889999987531        2578888776533322234678888888853343 3566543  2  268999


Q ss_pred             cCCCCCH
Q 041096          425 YMPNGSL  431 (645)
Q Consensus       425 y~~~gsL  431 (645)
                      |+++.++
T Consensus       115 ~i~G~~l  121 (369)
T 3c5i_A          115 WLYGDPL  121 (369)
T ss_dssp             CCCSEEC
T ss_pred             EecCCcC
Confidence            9987544

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.37  E-value=0.12  Score=52.78  Aligned_cols=76  Identities=13%  Similarity=0.130  Sum_probs=39.8

Q ss_pred             eeccCCceE-EEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC--CCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          355 ILGRGAFGN-VYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH--KNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       355 ~lG~G~fg~-Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      .|+.|.... +|+....+ +..+++|......  ..++..|+.++..+..  -.+.+++.++.+.+  +++||++.+..+
T Consensus        25 ~l~gg~s~~~~~r~~~~~-~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l   99 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPT-GAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF   99 (333)
T ss_dssp             C--------CCEEEECTT-CCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred             ECCCCCCCceEEEEEcCC-CCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence            455554443 66765432 4556677544322  1345567777777642  23456666654444  789999977776


Q ss_pred             hHHh
Q 041096          432 DRML  435 (645)
Q Consensus       432 ~~~l  435 (645)
                      .+++
T Consensus       100 ~~~l  103 (333)
T 3csv_A          100 TEVI  103 (333)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            5544

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.11  E-value=0.66  Score=47.61  Aligned_cols=66  Identities=20%  Similarity=0.134  Sum_probs=41.9

Q ss_pred             CCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC---CCeeeeeee------eeeCCeEEEEEecCCCC
Q 041096          359 GAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH---KNLVQLLGW------CAEKGELLLVYEYMPNG  429 (645)
Q Consensus       359 G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H---~niv~l~g~------~~~~~~~~lV~Ey~~~g  429 (645)
                      |....||+....+ + .+++|+......     ..|+..+..|..   +++.+.+..      +...+..+++|||+++.
T Consensus        34 g~~N~vy~v~~~~-g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~  106 (339)
T 3i1a_A           34 DTNAFAYQADSES-K-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP  106 (339)
T ss_dssp             CSSCEEEEEECSS-C-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred             ccccceEEEEeCC-C-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence            3357899998654 4 788997665331     356666666632   224454432      23356789999999987


Q ss_pred             CH
Q 041096          430 SL  431 (645)
Q Consensus       430 sL  431 (645)
                      .+
T Consensus       107 ~~  108 (339)
T 3i1a_A          107 NG  108 (339)
T ss_dssp             BT
T ss_pred             cC
Confidence            65

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=89.72  E-value=1.2  Score=47.33  Aligned_cols=74  Identities=8%  Similarity=0.036  Sum_probs=47.8

Q ss_pred             ceeccCCceEEEEEEECCC-------CeEEEEEeccCCcchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFASS-------GSVAAVKRSKHSHEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~-------~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.|..|-...+|+......       +..+++|+........-+..+|..+++.+.- .-..++++.+.    -++||||
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ef  151 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEF  151 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEEC
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEE
Confidence            4566777889999987531       4678888865433223344678888888853 22345555332    2789999


Q ss_pred             CCCCCH
Q 041096          426 MPNGSL  431 (645)
Q Consensus       426 ~~~gsL  431 (645)
                      +++.+|
T Consensus       152 I~G~~l  157 (424)
T 3mes_A          152 IDGEPL  157 (424)
T ss_dssp             CCSEEC
T ss_pred             eCCccC
Confidence            998664

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=88.29  E-value=0.06  Score=37.31  Aligned_cols=29  Identities=14%  Similarity=0.248  Sum_probs=16.7

Q ss_pred             eeeecchhHHHHHHHHHhheeeeEEeecc
Q 041096          292 GLGLGIAGPAFFCVVLAVFGYISIKKWKN  320 (645)
Q Consensus       292 ~i~~~i~~~~~~~~~~~~~~~~~~rk~~~  320 (645)
                      .|+.+++++++++++++++.++++||++.
T Consensus        12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~   40 (44)
T 2ks1_B           12 SIATGMVGALLLLLVVALGIGLFMRRRHI   40 (44)
T ss_dssp             SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence            46667776666655555555555554443

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=86.20  E-value=0.076  Score=36.69  Aligned_cols=29  Identities=14%  Similarity=0.248  Sum_probs=16.0

Q ss_pred             eeeecchhHHHHHHHHHhheeeeEEeecc
Q 041096          292 GLGLGIAGPAFFCVVLAVFGYISIKKWKN  320 (645)
Q Consensus       292 ~i~~~i~~~~~~~~~~~~~~~~~~rk~~~  320 (645)
                      .|+.+++++++++++++++.++++||++.
T Consensus        11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~   39 (44)
T 2l2t_A           11 LIAAGVIGGLFILVIVGLTFAVYVRRKSI   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             eEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence            46666666666555555554555554443

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=84.51  E-value=0.1  Score=56.34  Aligned_cols=58  Identities=5%  Similarity=0.028  Sum_probs=16.1

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEE------EeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeee
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAV------KRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWC  413 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vav------K~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~  413 (645)
                      .+.||   ||.||+|.+.....+||+      |..+.   +.+....|.+|..+++.++|+|+++.+++.
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            45566   999999999765567888      65544   233345788999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	645
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-57
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-56
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	1e-55
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	8e-55
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-54
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-54
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-54
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	2e-54
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-54
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-54
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	2e-53
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	3e-53
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	5e-53
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	5e-53
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-53
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	1e-52
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-52
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-52
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-51
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	3e-51
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-51
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-50
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-50
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	4e-50
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	1e-49
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-49
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-49
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-49
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	9e-49
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	1e-48
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	2e-48
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-48
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	2e-48
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	3e-48
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-48
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-47
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-47
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-47
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-47
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-47
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-47
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-47
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-46
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	3e-46
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-45
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-45
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-45
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-45
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-44
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-43
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-42
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-42
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-41
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-40
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-40
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	2e-40
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-40
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-39
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-39
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-39
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-39
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-38
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-37
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-37
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-37
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-36
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-36
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-36
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-35
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-35
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-35
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	3e-34
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	7e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-34
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-33
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-31
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-31
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-31
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-30
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-29
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-27
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-27
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-27
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	7e-27
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-25
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	2e-17
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-15
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	4e-11

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 2e-57
 Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 38/284 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G G+FG VYK  +    +V  +  +  + +    F  E+ ++   RH N++  +G+ 
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
               +L +V ++    SL   L+              ++I    A  + YLH +    +I
Sbjct: 74  -TAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---II 126

Query: 474 HRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQY---GTA 516
           HRD+K++NI L  +   ++                 F   +G++ ++APE ++       
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
           + ++DV+++G+V+ E+  G+ P           N  D +  +   G +     K  +   
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI-------NNRDQIIFMVGRGYLSPDLSKVRSNC- 238

Query: 577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPK 620
               MKRL+     C       RP   ++   +   A  L  PK
Sbjct: 239 -PKAMKRLM---AECLKKKRDERPLFPQILASIELLARSL--PK 276

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  190 bits (484), Expect = 3e-56
 Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 55/305 (18%)

Query: 338 FSYRELRSATRGFHSN---------RILGRGAFGNVYKAYFASSGS---VAAVKR--SKH 383
           F++ +   A R F            +++G G FG V   +    G      A+K   S +
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 384 SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGV 443
           + + + +FL+E SI+    H N++ L G   +   ++++ E+M NGSLD  L Q+     
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 444 LLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------- 492
             +    + ++ G+A+ + YL        +HRD+ A NI++++N   ++           
Sbjct: 126 --TVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180

Query: 493 ------ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEG 545
                  +S       + + APE +QY   T  +DV+SYG+V+ E ++ G RP    T  
Sbjct: 181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT-- 238

Query: 546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRV 605
                             +I A ++        D    L  + L C   D + RP   ++
Sbjct: 239 ---------------NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 283

Query: 606 FQILN 610
              L+
Sbjct: 284 VNTLD 288

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  187 bits (475), Expect = 1e-55
 Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 15/240 (6%)

Query: 24  NMNFDFTSFN---LRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVPFFDQ 77
           +++F F +F      +I   GD+    G + L +          S+G  +Y++PV  +D 
Sbjct: 1   SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 60

Query: 78  ETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS---QLTKN 134
           +T + ASF + F+F +     +   DGLAFF++P +  +  AG  LGL N S   Q +KN
Sbjct: 61  KTESVASFYTEFTFFLKI-TGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKN 119

Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
           + VA+EFDT  +P+F +P   HIG++++S+ S+ T     +  D+ SG + TA I Y   
Sbjct: 120 QVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--WEDSDIFSGKIATARISYDGS 177

Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTEL-HMIQSWSFQTS 253
             +L V +SY        +L  ++D+   L  ++ VG SAST  +  L   I SW F ++
Sbjct: 178 AEILTVVLSYP--DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSN 235

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  184 bits (468), Expect = 8e-55
 Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 15/239 (6%)

Query: 22  SNNMNFDFTSFNLRNITLLGD-SYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFDQ 77
           SN++ F+F  FN  N+ L  D S   +G + LT   G       S G   Y+ P+  +D 
Sbjct: 1   SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 78  ETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFV 137
            T T ASF + F+F+I   N +   DGLAF + P        GG LGL + S  +    V
Sbjct: 61  TTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSN-SNFHTV 119

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  + DP E HIG+D++S+ SIKT        D  +G      I Y +   +
Sbjct: 120 AVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRW-----DFVNGENAEVLITYDSSTNL 173

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           L   + Y + +  + ++   +DL   L   + VGFSA+T   +G+ E + + SWSF + 
Sbjct: 174 LVASLVYPS-QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASK 231

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 2e-54
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 36/274 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G G FG V+  Y+ +   VA +K  +     + +F+ E  ++  L H  LVQL G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            E+  + LV+E+M +G L            L +    L + + +      +    E  VI
Sbjct: 70  LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVI 123

Query: 474 HRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           HRD+ A N ++  N   ++              +S T T   + + +PE   +   + K+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           DV+S+GV++ EV    +         ++V  +   + LY                     
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY----------------KPRLA 227

Query: 581 MKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE 614
              +  +   C       RP+  R+ + L   AE
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  185 bits (471), Expect = 2e-54
 Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 34/290 (11%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P   +Y +             LG G +G VY+  +       AVK  K       EFL E
Sbjct: 4   PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 63

Query: 395 LSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIV 454
            +++  ++H NLVQLLG C  +    ++ E+M  G+L   L +   N   +S    L + 
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMA 121

Query: 455 VGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAG 501
             ++SA+ YL +   +  IHRD+ A N ++  N   ++              ++      
Sbjct: 122 TQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178

Query: 502 TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE 561
            + + APE L Y   + K+DV+++GV++ E+A          +  ++  L+         
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL--------- 229

Query: 562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                  +K       E   +++  +  +C   + S RPS   + Q    
Sbjct: 230 -------EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  183 bits (465), Expect = 2e-54
 Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 16/236 (6%)

Query: 22  SNNMNFDFTSFNLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETN 80
           SN+ +F+  +FN  N+ L GD +    G + LT   G    S G   Y+ P+   D+  +
Sbjct: 1   SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 81  TTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIE 140
             ASF++ F+F IN  N  +   GLAF + P        G  LGL N+           +
Sbjct: 61  NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNT--------TNYD 112

Query: 141 FDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKV 200
            D        D   N I +D++S+  I T           +G      I Y +    L+V
Sbjct: 113 RDAHTVAVVFDTVSNRIEIDVNSIRPIATESC---NFGHNNGEKAEVRITYDSPKNDLRV 169

Query: 201 FMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
            + Y +       +   + L   ++  + VGFSA++   + +TE H + SWSF ++
Sbjct: 170 SLLYPS-SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN 224

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  183 bits (466), Expect = 2e-54
 Identities = 78/240 (32%), Positives = 116/240 (48%), Gaps = 18/240 (7%)

Query: 26  NFDFTSFNL--RNITLLGDSYL-RNGVIGLTRE---LGVPASSSGSLIYNNPVPFFDQET 79
           +F F+ F     N+TL G + + ++GV+ LT+          S+G  +Y  PV  +D  T
Sbjct: 5   SFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTT 64

Query: 80  NTTASFTSRFSFSINNVNPSSFG-DGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFV 137
            T ASF +RFSFSI          DGL FF+ P         G LG+ N+S+     + +
Sbjct: 65  GTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTL 124

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +P +D P   HIG+D++S+ SIKT         L +G V    I Y    ++
Sbjct: 125 AVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPF-----QLDNGQVANVVIKYDAPSKI 178

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTSG 254
           L V + Y +       +   +D+   L   + VG S +T     + E H + SWSFQ S 
Sbjct: 179 LHVVLVYPS-SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQASL 237

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 3e-54
 Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 47/312 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLV 407
           F     LG G  G V+K     SG V A K    +     + + + EL ++       +V
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
              G     GE+ +  E+M  GSLD++L +       +       + + +   LTYL ++
Sbjct: 68  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREK 123

Query: 468 CEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTAT 517
              +++HRD+K SNI++++    +L          +S      GT  Y++PE LQ    +
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
            ++D++S G+ ++E+A GR PI         +     V G  AE         R   ++ 
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241

Query: 578 EDEMKRLLLVGL--------------------------SCANPDSSARPSMRRVFQ---I 608
            D    + +  L                           C   + + R  ++++     I
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

Query: 609 LNNEAEPLVVPK 620
             ++AE +    
Sbjct: 302 KRSDAEEVDFAG 313

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 4e-54
 Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 36/271 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LG G FG V+  Y+ +  +  AVK  K        FLAE +++  L+H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
             +  + ++ EYM NGSL   L     +G+ L+    L++   +A  + ++    E+  I
Sbjct: 78  -TQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131

Query: 474 HRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           HRD++A+NI++    + ++              ++       + + APE + YGT T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           DV+S+G+++ E+    R         +++  ++  + +                    +E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC-------------PEE 238

Query: 581 MKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           + +L+     C       RP+   +  +L +
Sbjct: 239 LYQLM---RLCWKERPEDRPTFDYLRSVLED 266

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score =  181 bits (460), Expect = 2e-53
 Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 19/243 (7%)

Query: 23  NNMNFDFTSF------NLRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVP 73
           N +NF +  F      N   IT LGD+    G + LT+         SS+G   Y+ PV 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 74  FFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-- 131
            +D  T   ASF + F+F +     +   DGLAFF++P +  +   GG LGL        
Sbjct: 62  LWDS-TGKAASFYTSFTF-LLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAAD 119

Query: 132 -TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWID 190
            +KN+ VA+EFDT ++  ++DP   HIG+D++S+ S+ T     +  D    ++ TA I 
Sbjct: 120 PSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR--WENDDAYGSSIATAHIT 177

Query: 191 YKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
           Y    ++L V +SY        +L   +DL+  L   + +GFSA   G  E+  I SW F
Sbjct: 178 YDARSKILTVLLSYE--HGRDYILSHVVDLAKVLPQKVRIGFSAGV-GYDEVTYILSWHF 234

Query: 251 QTS 253
            ++
Sbjct: 235 FST 237

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  180 bits (458), Expect = 3e-53
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 12/240 (5%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTREL-GVPASSSGSLIYNNPVPFFDQ 77
           S++++F F +F  N ++++  G+ S +  GV+ L +    +P  + G   Y  P+  ++ 
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 78  ETNTTASFTSRFSF-SINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNK 135
            T   ASF + FSF    + NP +  DGL FF++P +  L  AGG  GL N ++  +  +
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQ 120

Query: 136 FVAIEFDTRLDP-HFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
            VA+EFDT   P +F DP   HIG+D++ ++SI               NV    I Y+  
Sbjct: 121 TVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAER---WNKRYGLNNVANVEIIYEAS 177

Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-EGSTELHMIQSWSFQTS 253
            + L   ++Y +    +  +   +DL   L   + VGFS ST  G    H + +W F ++
Sbjct: 178 SKTLTASLTYPS-DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTST 236

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  180 bits (458), Expect = 5e-53
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 14/239 (5%)

Query: 22  SNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFDQE 78
           ++  +F F +FN  +  L GD+ + +  + LT+  G      SS G   Y++P+  +D+ 
Sbjct: 1   ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKS 60

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLT-KNKFV 137
           T   AS+ + F+ +I   N SS  DG+AF + P      S  G LG+ +S       + V
Sbjct: 61  TGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTV 120

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
           A+EFDT  +  + DP   HIG+D++S++SI+TA        L +G      I Y     +
Sbjct: 121 AVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASW-----GLANGQNAEILITYNAATSL 174

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
           L   + + + +  + ++   +D++  L   + +GFSA+T   EG TE H + SWSF + 
Sbjct: 175 LVASLVHPS-RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASK 232

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score =  179 bits (456), Expect = 5e-53
 Identities = 80/242 (33%), Positives = 128/242 (52%), Gaps = 17/242 (7%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQE 78
           S++++F+F  F  N +NI   GD S    GV+ +T+      +S G  +Y  P+  +D  
Sbjct: 1   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 60

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSS-QLTKNK 135
           T   ASF + FSF +   + S   DGLAFF++P N  +  GS+ G  GL +SS   + N+
Sbjct: 61  TGKVASFATSFSFVVKA-DKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQ 119

Query: 136 FVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
            +A+EFDT     ++  DPD  HIG+D++S++SIKT        D ++G V    I Y+ 
Sbjct: 120 IIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVK-----WDWRNGEVADVVITYRA 174

Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWSFQ 251
             + L V +SY +    + ++  ++DL   L   + VGFS     +   E H + SW F 
Sbjct: 175 PTKSLTVCLSYPS-DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFT 233

Query: 252 TS 253
           ++
Sbjct: 234 SN 235

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 8e-53
 Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 34/268 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + +G+G FG+V    +   G+  AVK  K+    +  FLAE S++  LRH NLVQLLG  
Sbjct: 13  QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVI 69

Query: 414 AE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            E KG L +V EYM  GSL   L   S    +L     L   + +  A+ YL        
Sbjct: 70  VEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNF 124

Query: 473 IHRDIKASNIMLDANFNAR---------LESSFTLTAGTMGYLAPEYLQYGTATEKTDVF 523
           +HRD+ A N+++  +  A+           S+       + + APE L+    + K+DV+
Sbjct: 125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 184

Query: 524 SYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKR 583
           S+G+++ E+    R          +V  V+       +G  ++A D           +  
Sbjct: 185 SFGILLWEIYSFGRVPYPRIPLKDVVPRVE-------KGYKMDAPDGC------PPAVYE 231

Query: 584 LLLVGLSCANPDSSARPSMRRVFQILNN 611
           ++    +C + D++ RPS  ++ + L +
Sbjct: 232 VM---KNCWHLDAAMRPSFLQLREQLEH 256

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (456), Expect = 2e-52
 Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 36/273 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE---FLAELSIIACLRHKNLVQLL 410
             +G G++G   K    S G +   K   +    + E    ++E++++  L+H N+V+  
Sbjct: 10  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69

Query: 411 GWCAEK--GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ-- 466
               ++    L +V EY   G L  ++ + ++    L     L ++  L  AL   H+  
Sbjct: 70  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 129

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYG 514
           +    V+HRD+K +N+ LD   N +L             S      GT  Y++PE +   
Sbjct: 130 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 189

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
           +  EK+D++S G ++ E+     P    ++                 G+I E   +R+  
Sbjct: 190 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA-------------GKIREGKFRRIPY 236

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
            ++ DE+  ++       N     RPS+  + +
Sbjct: 237 RYS-DELNEII---TRMLNLKDYHRPSVEEILE 265

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (454), Expect = 9e-52
 Identities = 68/308 (22%), Positives = 112/308 (36%), Gaps = 44/308 (14%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIACLRHKN 405
           F   R +G G+FG VY A    +  V A+K+     K S+E   + + E+  +  LRH N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            +Q  G    +    LV EY    + D +          L       +  G    L YLH
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLH 132

Query: 466 QECEQQVIHRDIKASNIMLDANFN--------ARLESSFTLTAGTMGYLAPEYLQ---YG 514
                 +IHRD+KA NI+L             A + +      GT  ++APE +     G
Sbjct: 133 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEG 189

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
               K DV+S G+  +E+A  + P+        + +             I +     L  
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-------------IAQNESPALQS 236

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPLVVPKLKPCLTFSSVSLTL 634
               +  +  +    SC       RP+      +L +     V+ +  P +    +  T 
Sbjct: 237 GHWSEYFRNFV---DSCLQKIPQDRPTSE---VLLKH---RFVLRERPPTVIMDLIQRTK 287

Query: 635 EDIVSEDE 642
           + +   D 
Sbjct: 288 DAVRELDN 295

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 1e-51
 Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 38/270 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           + LG G FG V    +     VA +K  K     + EF+ E  ++  L H+ LVQL G C
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
            ++  + ++ EYM NG L   L +             L +   +  A+ YL     +Q +
Sbjct: 69  TKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFL 122

Query: 474 HRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           HRD+ A N +++     ++              +S   +   + +  PE L Y   + K+
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182

Query: 521 DVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
           D++++GV++ E+ + G+ P ER T                      E   + L       
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSE-----------------TAEHIAQGLRLYRPHL 225

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQIL 609
             +++  +  SC +  +  RP+ + +   +
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNI 255

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score =  175 bits (444), Expect = 3e-51
 Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 23/242 (9%)

Query: 26  NFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELGVPAS--SSGSLIYNNPVPFFDQETN 80
           +F+F  F  N   + L  D     N V+ LT+ +    +  S+G  +Y  PV  +D  T 
Sbjct: 4   SFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG 63

Query: 81  TTASFTSRFSFSINNVNPSSFG-DGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
             ASF +RFSFSI    P     DGL FFI+P N   G  GG  G+ N    +   FVA+
Sbjct: 64  NVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL--SPYPFVAV 121

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDT  +    DP   HIG+D++S+ S KT         L +G +    I Y    ++L 
Sbjct: 122 EFDTFRNT--WDPQIPHIGIDVNSVISTKTVP-----FTLDNGGIANVVIKYDASTKILH 174

Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-------EGSTELHMIQSWSFQT 252
           V + + +       +   +DL   L  ++ VGFSA+T         +TE H I SWSF  
Sbjct: 175 VVLVFPS-LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFSA 233

Query: 253 SG 254
           S 
Sbjct: 234 SL 235

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 7e-51
 Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 42/293 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             +G+G FG V++  +   G   AVK      E      AE+     LRH+N++  +   
Sbjct: 9   ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66

Query: 414 AEKG----ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC- 468
            +      +L LV +Y  +GSL   L + +     ++    + + +  AS L +LH E  
Sbjct: 67  NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 121

Query: 469 ----EQQVIHRDIKASNIMLDANFNARL----------------ESSFTLTAGTMGYLAP 508
               +  + HRD+K+ NI++  N    +                + +     GT  Y+AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181

Query: 509 EYLQ------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM---VNLVDWVWGLY 559
           E L       +  + ++ D+++ G+V  E+A          +       +   D      
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241

Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLL-VGLSCANPDSSARPSMRRVFQILNN 611
            +    +     +   +   E  R++  +   C   + +AR +  R+ + L+ 
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 2e-50
 Identities = 57/282 (20%), Positives = 115/282 (40%), Gaps = 43/282 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSK--HSHEGKTEFLAELSIIACLRH 403
               +++G G FG VYK    +S        A+K  K  ++ + + +FL E  I+    H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            N+++L G  ++   ++++ EYM NG+   +     E     S    + ++ G+A+ + Y
Sbjct: 69  HNIIRLEGVISKYKPMMIITEYMENGA---LDKFLREKDGEFSVLQLVGMLRGIAAGMKY 125

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAP 508
           L        +HRD+ A NI++++N   ++                 + +     + + AP
Sbjct: 126 LA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 182

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA 568
           E + Y   T  +DV+S+G+V+ EV         E   H+++  +                
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---------------- 226

Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
           +         D    +  + + C   + + RP    +  IL+
Sbjct: 227 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 3e-50
 Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 36/275 (13%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQL 409
                 LG+G FG V+   +  +  VA +K  K        FL E  ++  LRH+ LVQL
Sbjct: 19  LRLEVKLGQGCFGEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 77

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                 +  + +V EYM  GSL    +   E G  L     +++   +AS + Y+ +   
Sbjct: 78  YAVV-SEEPIYIVTEYMSKGSLL--DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN- 133

Query: 470 QQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTA 516
              +HRD++A+NI++  N   ++              ++       + + APE   YG  
Sbjct: 134 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 191

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
           T K+DV+S+G+++ E+    R         ++++ V                ++      
Sbjct: 192 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV----------------ERGYRMPC 235

Query: 577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             +  + L  +   C   +   RP+   +   L +
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score =  172 bits (436), Expect = 4e-50
 Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 16/242 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLR-NGVIGLTRELGVPAS--SSGSLIYNNPVPFFD 76
           + +++F F  F  N   +   GD+ +   GV+ LT  +    S  S G  +Y  P   +D
Sbjct: 1   TGSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSS-QLTKNK 135
             T   ASF + F+F I   NP++  DGLAFF++P +      GG LG+         N+
Sbjct: 61  STTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQ 120

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +  + DP   H+G++++S+ESIKT        +  +G V   +I Y+   
Sbjct: 121 IVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPW-----NWTNGEVANVFISYEAST 174

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + L   + Y +    + ++   +D+   L   +  GFSA+T   +G  + + + SWSF++
Sbjct: 175 KSLTASLVYPS-LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFES 233

Query: 253 SG 254
           + 
Sbjct: 234 NL 235

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  170 bits (432), Expect = 1e-49
 Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 14/237 (5%)

Query: 22  SNNMNFDFTSFNLRN--ITLLGD-SYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQE 78
           +  ++F+F SF+  N  I   GD + L NG I LT       +S G ++Y  PV  +   
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTN--LNKVNSVGRVLYAMPVRIWSSA 58

Query: 79  TNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFV 137
           T   ASF + FSF + ++      DG+ FFI+P++  + +     G +  S       FV
Sbjct: 59  TGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFV 118

Query: 138 AIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRM 197
            +EFDT  +  ++DP  +H+G+D++S++S+KT        +  SG V+   + Y +  + 
Sbjct: 119 GVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW-----NSVSGAVVKVTVIYDSSTKT 173

Query: 198 LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST-EGSTELHMIQSWSFQTS 253
           L V ++          +   +DL   L   +  GFSAS   G  ++H+I+SWSF ++
Sbjct: 174 LSVAVTND--NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (438), Expect = 2e-49
 Identities = 66/297 (22%), Positives = 117/297 (39%), Gaps = 44/297 (14%)

Query: 336 REFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGS---VAAVKRSKH--SHEGKTE 390
           +   +  +  ++   H N ++GRG FG VY      +       AVK           ++
Sbjct: 15  QAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ 74

Query: 391 FLAELSIIACLRHKNLVQLLGWCAE-KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYH 449
           FL E  I+    H N++ LLG C   +G  L+V  YM +G L   +  ++ N    +   
Sbjct: 75  FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN---PTVKD 131

Query: 450 RLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL----------------E 493
            +   + +A  +        ++ +HRD+ A N MLD  F  ++                 
Sbjct: 132 LIGFGLQVAKGM---KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188

Query: 494 SSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVD 553
            + T     + ++A E LQ    T K+DV+S+GV++ E+     P   +       N  D
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV------NTFD 242

Query: 554 WVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
               L    R+       L   +  D +  ++   L C +P +  RPS   +   ++
Sbjct: 243 ITVYLLQGRRL-------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 289

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 4e-49
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 39/272 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             LG GAFG VYKA    +  +AA K     S E   +++ E+ I+A   H N+V+LL  
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
              +  L ++ E+   G++D ++    E    L+      +      AL YLH   + ++
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNKI 131

Query: 473 IHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTA---- 516
           IHRD+KA NI+   + + +L                    GT  ++APE +   T+    
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 191

Query: 517 -TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
              K DV+S G+ ++E+A    P         ++ +        A+     +  K     
Sbjct: 192 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDF--- 248

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
                +K+ L         +  AR +  ++ Q
Sbjct: 249 -----LKKCL-------EKNVDARWTTSQLLQ 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 5e-49
 Identities = 78/317 (24%), Positives = 127/317 (40%), Gaps = 50/317 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGS--VAAVKRSK--HSHEGKTEFLAELSIIACL-RHK 404
                ++G G FG V KA     G    AA+KR K   S +   +F  EL ++  L  H 
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------------DSENGVLLSWYHRLN 452
           N++ LLG C  +G L L  EY P+G+L   L +             +     LS    L+
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAG 501
               +A  + YL    ++Q IHRD+ A NI++  N+ A++               T+   
Sbjct: 132 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 188

Query: 502 TMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE 561
            + ++A E L Y   T  +DV+SYGV++ E+              ++   +        +
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-------Q 241

Query: 562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN---EAEPLVV 618
           G  +E           +DE+  L+     C       RPS  ++   LN    E +  V 
Sbjct: 242 GYRLEKPLNC------DDEVYDLM---RQCWREKPYERPSFAQILVSLNRMLEERKTYVN 292

Query: 619 PKLKPCLTFSSVSLTLE 635
             L    T++ +  + E
Sbjct: 293 TTLYEKFTYAGIDCSAE 309

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score =  168 bits (426), Expect = 9e-49
 Identities = 75/239 (31%), Positives = 111/239 (46%), Gaps = 22/239 (9%)

Query: 27  FDFTSF--NLRNITLLGD-SYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFDQETN 80
           F+F  F  N + + L    S   NGV+ LT+          S+G  +Y  P+  +D  T 
Sbjct: 5   FNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTG 64

Query: 81  TTASFTSRFSFSINNVNP-SSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAI 139
             ASF +RFSF+I          DGL FF+ P N   G  GG LG+        +   A+
Sbjct: 65  NVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPP--EGDNAFAV 122

Query: 140 EFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLK 199
           EFDT  +    DP   HIG+D++S+ S KT         L++G V    I Y +  ++L 
Sbjct: 123 EFDTFQN--TWDPQVPHIGIDVNSIVSSKTLH-----FQLENGGVANVVIKYDSPTKILN 175

Query: 200 VFMSYSNLKPVTPLLKVNIDLSGYLKGN--MYVGFSAST---EGSTELHMIQSWSFQTS 253
           V +++ +       L   +DL      +  + VG SA+T   + + E H I SWSF +S
Sbjct: 176 VVLAFHS-VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSS 233

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score =  168 bits (425), Expect = 1e-48
 Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 18/242 (7%)

Query: 23  NNMNFDFTSF--NLRNITLLGDSYLRNGVIGLTRELGVP---ASSSGSLIYNNPVPFFDQ 77
           ++++F F +F  + +N+   GD+ ++N  + LT+        AS+ G ++++  V  +++
Sbjct: 2   DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61

Query: 78  ETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQI-LGSAGGCLGLVNSSQL---TK 133
            ++  A+F S+FSFS+ +   +       F   PD  I  GS GG LGL         + 
Sbjct: 62  SSSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSA 121

Query: 134 NKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDY 191
           N+ +A+EFDT      +  DP+  HIG+D++S+ S+KT        D + G  +   + +
Sbjct: 122 NQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK-----WDRRDGQSLNVLVTF 176

Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ 251
               R L V  +YS        +   +D+   L   + VGFSA++    + H ++SWSF 
Sbjct: 177 NPSTRNLDVVATYS--DGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFT 234

Query: 252 TS 253
           ++
Sbjct: 235 ST 236

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score =  167 bits (424), Expect = 2e-48
 Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 19/241 (7%)

Query: 22  SNNMNFDFTSF--NLRNITLLGDSYLR-NGVIGLTREL--GVPASSSGSLIYNNPVPFFD 76
           + + +F FT+F  N  N+ L  D+ +   G + LT          S G  +Y  P+   D
Sbjct: 1   TESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVN-SSQLTKNK 135
             T   ASFT+ FSF +     ++  DGLAFF++P +    + GG LGL    +     +
Sbjct: 61  NTT--LASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQ 118

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT    +  DP+  HIG+D + +ES KT        D+  G      I Y+   
Sbjct: 119 TVAVEFDTYS--NAWDPNYTHIGIDTNGIESKKTTP-----FDMVYGEKANIVITYQAST 171

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
           + L   + +      +  +   +DL   L   + VGFSA+T    G  E H I SWSF  
Sbjct: 172 KALAASLVFPV-SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAV 230

Query: 253 S 253
           S
Sbjct: 231 S 231

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 2e-48
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 39/268 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT----EFLAELSIIACLRHKNLVQL 409
           R LG+G FGNVY A    S  + A+K    +   K     +   E+ I + LRH N+++L
Sbjct: 12  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G+  +   + L+ EY P G++ R L + S+             +  LA+AL+Y H    
Sbjct: 72  YGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCH---S 124

Query: 470 QQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           ++VIHRDIK  N++L +    ++           S  T   GT+ YL PE ++     EK
Sbjct: 125 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 184

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
            D++S GV+  E   G+ P E  T                   + I   +        E 
Sbjct: 185 VDLWSLGVLCYEFLVGKPPFEANTYQETY--------------KRISRVEFTFPDFVTE- 229

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQ 607
             + L+         + S RP +R V +
Sbjct: 230 GARDLI---SRLLKHNPSQRPMLREVLE 254

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  167 bits (424), Expect = 3e-48
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 17/244 (6%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFF 75
           +  ++F +  F     N+ L GD     +G + L +         SS G  +Y+ P+  +
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNK 135
           D+ET + ASF + F+F+    +     DGLAFF++P +    +  G LGL N ++ + ++
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENE-SGDQ 119

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+EFDT  +    DP   HIG++++S+ SIKT        DL +  V    I Y    
Sbjct: 120 VVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTSW-----DLANNKVAKVLITYDAST 172

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWSFQTS 253
            +L   + Y + +  + +L   +DL   L   + +GFSA+T      E H + SWSF ++
Sbjct: 173 SLLVASLVYPS-QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASN 231

Query: 254 GFRP 257
               
Sbjct: 232 LPHA 235

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 5e-48
 Identities = 59/295 (20%), Positives = 111/295 (37%), Gaps = 54/295 (18%)

Query: 354 RILGRGAFGNVYKAYF-----ASSGSVAAVKRSKHSH--EGKTEFLAELSIIACL-RHKN 405
           + LG GAFG V +A       + +    AVK  K S     +   ++EL +++ L  H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ--------------DSENGVLLSWYHRL 451
           +V LLG C   G  L++ EY   G L   L +                ++ + L     L
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFT 497
           +    +A  + +L     +  IHRD+ A NI+L      ++                   
Sbjct: 149 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205

Query: 498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG 557
                + ++APE +     T ++DV+SYG+ + E+                        G
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPG 250

Query: 558 LYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE 612
           +  + +  +   +       E     +  +  +C + D   RP+ +++ Q++  +
Sbjct: 251 MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (422), Expect = 1e-47
 Identities = 55/278 (19%), Positives = 99/278 (35%), Gaps = 39/278 (14%)

Query: 348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHK 404
           R    +  +GRG+F  VYK     +    A       K +   +  F  E  ++  L+H 
Sbjct: 9   RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 68

Query: 405 NLVQLLGWCAE----KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA 460
           N+V+           K  ++LV E M +G+L   L +       +      +    +   
Sbjct: 69  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKG 124

Query: 461 LTYLHQECEQQVIHRDIKASNIMLDANFN---------ARLESSFTLT--AGTMGYLAPE 509
           L +LH      +IHRD+K  NI +              A L+ +       GT  ++APE
Sbjct: 125 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPE 183

Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD 569
             +     E  DV+++G+ +LE+A    P        ++              R+     
Sbjct: 184 MYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR------------RVTSGVK 230

Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
                     E+K ++     C   +   R S++ +  
Sbjct: 231 PASFDKVAIPEVKEII---EGCIRQNKDERYSIKDLLN 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  166 bits (422), Expect = 2e-47
 Identities = 68/306 (22%), Positives = 123/306 (40%), Gaps = 60/306 (19%)

Query: 350 FHSNRILGRGAFGNVYKAYF-----ASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLR 402
               R +G GAFG V++A           ++ AVK  + + S + + +F  E +++A   
Sbjct: 15  IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 74

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------------ 444
           + N+V+LLG CA    + L++EYM  G L+  L   S + V                   
Sbjct: 75  NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 134

Query: 445 --LSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL---------- 492
             LS   +L I   +A+ + YL    E++ +HRD+   N ++  N   ++          
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 191

Query: 493 ----ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM 548
                 +    A  + ++ PE + Y   T ++DV++YGVV+ E+              ++
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251

Query: 549 VNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI 608
           +  V        +G I+            E+    L  +   C +   + RPS   + +I
Sbjct: 252 IYYV-------RDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 295

Query: 609 LNNEAE 614
           L    E
Sbjct: 296 LQRMCE 301

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 2e-47
 Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 46/280 (16%)

Query: 353 NRILGRGAFGNVYKAYFA--SSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLV 407
           ++ LG G FG V K Y+         AVK      +    K E LAE +++  L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
           +++G C E    +LV E    G L++ L Q+      +   + + +V  ++  + YL + 
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEE- 125

Query: 468 CEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEYLQ 512
                +HRD+ A N++L     A++                 + T     + + APE + 
Sbjct: 126 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183

Query: 513 YGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
           Y   + K+DV+S+GV++ E  + G++P                         +    +K 
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----------------GSEVTAMLEKG 226

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                     + +  +   C   D   RP    V   L N
Sbjct: 227 ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 4e-47
 Identities = 60/271 (22%), Positives = 98/271 (36%), Gaps = 39/271 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK--RSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
           + LG GA+G V  A    +    AVK    K + +       E+ I   L H+N+V+  G
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
              E     L  EY   G L   +  D    + +           L + + YLH      
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH---GIG 123

Query: 472 VIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYGT-A 516
           + HRDIK  N++LD   N ++              E       GT+ Y+APE L+     
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
            E  DV+S G+V+  +  G  P ++ ++  +  +               E          
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS------------DWKEKKTYLNPWKK 231

Query: 577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
            +     LL         + SAR ++  + +
Sbjct: 232 IDSAPLALL---HKILVENPSARITIPDIKK 259

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 5e-47
 Identities = 58/291 (19%), Positives = 114/291 (39%), Gaps = 45/291 (15%)

Query: 341 RELRSATRGFH-SNRILGRGAFGNVYKAYFASSGS--VAAVKRSKHSHEGKT--EFLAEL 395
           ++L         ++  LG G FG+V +  +         A+K  K   E     E + E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 396 SIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVV 455
            I+  L +  +V+L+G C +   L+LV E    G L + L    E    +   +   ++ 
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLH 116

Query: 456 GLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE---------------SSFTLTA 500
            ++  + YL +   +  +HRD+ A N++L     A++                ++ +   
Sbjct: 117 QVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173

Query: 501 GTMGYLAPEYLQYGTATEKTDVFSYGVVVLEV-ACGRRPIERETEGHKMVNLVDWVWGLY 559
             + + APE + +   + ++DV+SYGV + E  + G++P ++             V    
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMAFI 225

Query: 560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN 610
            +G+ +E   +         E+  L+     C       RP    V Q + 
Sbjct: 226 EQGKRMECPPECP------PELYALM---SDCWIYKWEDRPDFLTVEQRMR 267

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 6e-47
 Identities = 65/287 (22%), Positives = 116/287 (40%), Gaps = 45/287 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             +G+GA G VY A   ++G   A+++ +      K   + E+ ++   ++ N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
                EL +V EY+  GSL  ++ +               +      AL +LH     QV
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLHS---NQV 137

Query: 473 IHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           IHRDIK+ NI+L  + + +L            +S  +   GT  ++APE +       K 
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           D++S G++ +E+  G  P   E     +  +          G       ++L+       
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLS-----AI 245

Query: 581 MKRLLLVGLSCANPDSSARPSMRRVFQILNNE----AEPLVVPKLKP 623
            +  L     C + D   R S +   ++L ++    A+PL    L P
Sbjct: 246 FRDFL---NRCLDMDVEKRGSAK---ELLQHQFLKIAKPL--SSLTP 284

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  166 bits (422), Expect = 9e-47
 Identities = 60/289 (20%), Positives = 109/289 (37%), Gaps = 39/289 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE-FLAELSIIACLRHKNLVQLLGW 412
             LG GAFG V++    ++G+  A K     HE   E    E+  ++ LRH  LV L   
Sbjct: 32  EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 91

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +  E++++YE+M  G L   +         +S    +  +  +   L ++H   E   
Sbjct: 92  FEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMH---ENNY 145

Query: 473 IHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           +H D+K  NIM     +  L             + S  +T GT  + APE  +       
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 205

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
           TD++S GV+   +  G  P   E +   + N+    W       + ++A   ++     +
Sbjct: 206 TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW------NMDDSAFSGIS-----E 254

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRV-----FQILNNEAEPLVVPKLKP 623
           + K  +         D + R ++ +          N       +P  + 
Sbjct: 255 DGKDFI---RKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRY 300

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 1e-46
 Identities = 62/301 (20%), Positives = 107/301 (35%), Gaps = 61/301 (20%)

Query: 354 RILGRGAFGNVYKAYFASSGSVA-----AVKR--SKHSHEGKTEFLAELSIIA-CLRHKN 405
           ++LG GAFG V  A              AVK    K     +   ++EL ++     H+N
Sbjct: 43  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 102

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLY-------------------QDSENGVLLS 446
           +V LLG C   G + L++EY   G L   L                    ++ E+  +L+
Sbjct: 103 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 162

Query: 447 WYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL-------------- 492
           +   L     +A  + +L     +  +HRD+ A N+++      ++              
Sbjct: 163 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 219

Query: 493 ESSFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVNL 551
                     + ++APE L  G  T K+DV+SYG+++ E  + G  P            L
Sbjct: 220 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL 279

Query: 552 VDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
           +                             + + ++  SC   DS  RPS   +   L  
Sbjct: 280 I----------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323

Query: 612 E 612
           +
Sbjct: 324 Q 324

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score =  161 bits (409), Expect = 3e-46
 Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 18/244 (7%)

Query: 22  SNNMNFDFTSF--NLRNITLLGD-SYLRNGVIGLTRELG--VPASSSGSLIYNNPVPFFD 76
           S+ ++F   +F  N  ++   G+ S    GV+ LT+         S G  +Y  PV  + 
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILG--SAGGCLGLVNSSQ-LTK 133
             T + ASF++ F+F +   NP    DGLAF+++P +  +   S    LGL N+S   + 
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSS 120

Query: 134 NKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDY 191
           N+ VA+EFDT     +D  DP+  HIG+D++ +ESIKT        D  +G V  A I Y
Sbjct: 121 NQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQW-----DWINGGVAFATITY 175

Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWS 249
               + L   + Y +    T  +  ++DL   L   + VGFSA+T   T  E H + SWS
Sbjct: 176 LAPNKTLIASLVYPS-NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS 234

Query: 250 FQTS 253
           F ++
Sbjct: 235 FTST 238

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  163 bits (414), Expect = 1e-45
 Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 34/268 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
             LG GAFG V++    ++G V   K  +      K     E+SI+  L H  L+ L   
Sbjct: 35  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 94

Query: 413 CAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
             +K E++L+ E++  G L   +         +S    +N +      L ++H   E  +
Sbjct: 95  FEDKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMH---EHSI 148

Query: 473 IHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEK 519
           +H DIK  NIM +    + +             +    +T  T  + APE +        
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 208

Query: 520 TDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNED 579
           TD+++ GV+   +  G  P   E +   + N+         +    E A   ++      
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV------KRCDWEFDEDAFSSVS-----P 257

Query: 580 EMKRLLLVGLSCANPDSSARPSMRRVFQ 607
           E K  +    +    +   R ++    +
Sbjct: 258 EAKDFI---KNLLQKEPRKRLTVHDALE 282

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 1e-45
 Identities = 64/327 (19%), Positives = 118/327 (36%), Gaps = 57/327 (17%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVK------RSKHSHEGKTEFLAELSIIACLRH 403
           F   ++LG GAFG VYK  +   G    +       R   S +   E L E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTY 463
            ++ +LLG C     + L+ + MP G L   + +  +N       + LN  V +A  + Y
Sbjct: 71  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNY 126

Query: 464 LHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPE 509
           L     ++++HRD+ A N+++    + ++              E         + ++A E
Sbjct: 127 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183

Query: 510 YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD 569
            + +   T ++DV+SYGV V E+                       +       I    +
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKP----------------YDGIPASEISSILE 227

Query: 570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQIL--------------NNEAEP 615
           K             + ++ + C   D+ +RP  R +                   +E   
Sbjct: 228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 287

Query: 616 LVVPKLKPCLTFSSVSLTLEDIVSEDE 642
           L  P              ++D+V  DE
Sbjct: 288 LPSPTDSNFYRALMDEEDMDDVVDADE 314

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 1e-45
 Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 46/293 (15%)

Query: 350 FHSNRILGRGAFGNVYKAYF-----ASSGSVAAVKRSK--HSHEGKTEFLAELSIIACLR 402
              +R LG+G+FG VY+            +  A+K      S   + EFL E S++    
Sbjct: 22  ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQ------DSENGVLLSWYHRLNIVVG 456
             ++V+LLG  ++    L++ E M  G L   L        ++      S    + +   
Sbjct: 82  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141

Query: 457 LASALTYLHQECEQQVIHRDIKASNIMLDANFNARLE--------------SSFTLTAGT 502
           +A  + YL      + +HRD+ A N M+  +F  ++                        
Sbjct: 142 IADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198

Query: 503 MGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG 562
           + +++PE L+ G  T  +DV+S+GVV+ E+A       +     +++  V        EG
Sbjct: 199 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEG 251

Query: 563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP 615
            +++  D         D +  L+     C   +   RPS   +   +  E EP
Sbjct: 252 GLLDKPDNCP------DMLFELM---RMCWQYNPKMRPSFLEIISSIKEEMEP 295

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 4e-45
 Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 33/267 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
             LGRG FG V++    SS      K  K     +     E+SI+   RH+N++ L    
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 414 AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVI 473
               EL++++E++    +   +   + +   L+    ++ V  +  AL +LH      + 
Sbjct: 71  ESMEELVMIFEFISGLDIFERI---NTSAFELNEREIVSYVHQVCEALQFLH---SHNIG 124

Query: 474 HRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           H DI+  NI+     ++ +               +F L      Y APE  Q+   +  T
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           D++S G +V  +  G  P   ET    + N+++      AE    E A K ++      E
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMN------AEYTFDEEAFKEIS-----IE 233

Query: 581 MKRLLLVGLSCANPDSSARPSMRRVFQ 607
               +         +  +R +     Q
Sbjct: 234 AMDFV---DRLLVKERKSRMTASEALQ 257

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score =  156 bits (395), Expect = 2e-44
 Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 24/241 (9%)

Query: 22  SNNMNFDFTSFNLR-NITLLGD-SYLRNGVIGLTRELG---VPASSSGSLIYNNPVPFFD 76
           +   +F+F +F+    + L G+ +    G + LT           S G   Y++P+   D
Sbjct: 1   ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60

Query: 77  QETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNK 135
             +N  ASF + F+F I   N S    GLAF + P N         LG+ N++      +
Sbjct: 61  --SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNAR 118

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDL 195
            VA+ F+T    +  D D+N I   ++                  +G      I Y +  
Sbjct: 119 TVAVVFNT--FKNRIDFDKNFIKPYVNENCD----------FHKYNGEKTDVQITYDSSN 166

Query: 196 RMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQT 252
             L+VF+ ++    V   +   + L   +   + VGFS ++   E +TE H + SWSF +
Sbjct: 167 NDLRVFLHFTV-SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSS 225

Query: 253 S 253
            
Sbjct: 226 K 226

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 1e-43
 Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 57/295 (19%)

Query: 354 RILGRGAFGNVYKAY-------FASSGSVAAVK--RSKHSHEGKTEFLAELSIIACL-RH 403
           + LG GAFG V  A          +  +  AVK  +S  + +  ++ ++E+ ++  + +H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVL------------LSWYHRL 451
           KN++ LLG C + G L ++ EY   G+L   L      G+             LS    +
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138

Query: 452 NIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFT 497
           +    +A  + YL     ++ IHRD+ A N+++  +   ++                  T
Sbjct: 139 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195

Query: 498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLE-VACGRRPIERETEGHKMVNLVDWVW 556
                + ++APE L     T ++DV+S+GV++ E    G  P             V+ ++
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEELF 247

Query: 557 GLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
            L  EG  ++            +    L ++   C +   S RP+ +++ + L+ 
Sbjct: 248 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (388), Expect = 1e-42
 Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 25/213 (11%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKN 405
           F   +ILG G+F  V  A   ++    A+K  +  H            E  +++ L H  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
            V+L     +  +L     Y  NG L + + +                   + SAL YLH
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 125

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYL 511
               + +IHRD+K  NI+L+ + + ++              ++      GT  Y++PE L
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETE 544
              +A + +D+++ G ++ ++  G  P     E
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (386), Expect = 1e-42
 Identities = 59/283 (20%), Positives = 105/283 (37%), Gaps = 45/283 (15%)

Query: 354 RILGRGAFGNVYKAYFASS---GSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKNL 406
             LG G+FG V +  + +        AVK  K       E   +F+ E++ +  L H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           ++L G       + +V E  P GSL   L +   +             V +A  + YL  
Sbjct: 74  IRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLE- 128

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEYL 511
              ++ IHRD+ A N++L      ++                           + APE L
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
           +  T +  +D + +GV + E+    +       G ++++              I+   +R
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK-------------IDKEGER 233

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE 614
           L     ED  + +  V + C       RP+   +   L  EA+
Sbjct: 234 L--PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL-LEAQ 273

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 1e-41
 Identities = 53/276 (19%), Positives = 105/276 (38%), Gaps = 41/276 (14%)

Query: 354 RILGRGAFGNVYKAYFAS---SGSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQ 408
           R +G G FG+V++  + S        A+K  K+  S   + +FL E   +    H ++V+
Sbjct: 13  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           L+G    +  + ++ E    G L   L     +   L     +     L++AL YL    
Sbjct: 73  LIGVI-TENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE--- 125

Query: 469 EQQVIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGT 515
            ++ +HRDI A N+++ +N   +L                 +     + ++APE + +  
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185

Query: 516 ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
            T  +DV+ +GV + E+        +  + + ++  ++    L                 
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC----------- 234

Query: 576 FNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
                +  L+     C   D S RP    +   L+ 
Sbjct: 235 --PPTLYSLM---TKCWAYDPSRRPRFTELKAQLST 265

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  148 bits (374), Expect = 1e-40
 Identities = 58/294 (19%), Positives = 110/294 (37%), Gaps = 45/294 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE-FLAELSIIACLRHKNLVQLLG 411
            +LG GAF  V  A    +  + A+K  +K + EGK      E++++  ++H N+V L  
Sbjct: 15  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
                G L L+ + +  G L   + +        +      ++  +  A+ YL    +  
Sbjct: 75  IYESGGHLYLIMQLVSGGELFDRIVEKG----FYTERDASRLIFQVLDAVKYL---HDLG 127

Query: 472 VIHRDIKASNIMLDANFN-----------ARLESSFTLT---AGTMGYLAPEYLQYGTAT 517
           ++HRD+K  N++  +              +++E   ++     GT GY+APE L     +
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYS 187

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
           +  D +S GV+   + CG  P   E +      ++       AE          ++    
Sbjct: 188 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK------AEYEFDSPYWDDIS---- 237

Query: 578 EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--------ILNNEAEPLVVPKLKP 623
            D  K  +         D   R +  +  Q         L+      V  ++K 
Sbjct: 238 -DSAKDFI---RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 287

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  147 bits (371), Expect = 2e-40
 Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 44/271 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKNLVQL 409
            ILG G    V+ A         AVK  +            F  E    A L H  +V +
Sbjct: 13  EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 72

Query: 410 LGWCAEKGE----LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
                 +        +V EY+   +L  +++ +      ++    + ++     AL +  
Sbjct: 73  YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFS- 127

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEY 510
              +  +IHRD+K +NIM+ A    ++                +      GT  YL+PE 
Sbjct: 128 --HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185

Query: 511 LQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK 570
            +  +   ++DV+S G V+ EV  G  P   ++        V        +     A  +
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARHE 239

Query: 571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPS 601
            L+      ++  ++   L     +   R  
Sbjct: 240 GLS-----ADLDAVV---LKALAKNPENRYQ 262

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  144 bits (363), Expect = 2e-40
 Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 37/236 (15%)

Query: 22  SNNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETN 80
           +   +F   +FN  N+ L GD+ +  NG + L+        S     Y+ P+   D  T 
Sbjct: 1   ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTG 57

Query: 81  TTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIE 140
             ASF + F+ +I     ++   GL F + P                    +K   V +E
Sbjct: 58  NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPE----------------SKGDTVTVE 101

Query: 141 FDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKV 200
           FDT L     D + N I      +                 G      I Y +  ++  V
Sbjct: 102 FDTFLSRISIDVNNNDIKSVPWDV-------------HDYDGQNAEVRITYNSSTKVFSV 148

Query: 201 FMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSAST---EGSTELHMIQSWSFQTS 253
            +S  +    +  +   ++L   +   + VGFSA++   + S E H + SWSF + 
Sbjct: 149 SLSNPS-TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSK 203

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 2e-40
 Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 53/293 (18%)

Query: 354 RILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIA-CLRHKN 405
           + LGRGAFG V +A        ++    AVK  K    H      ++EL I+     H N
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 406 LVQLLGWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGV------------LLSWYHRLN 452
           +V LLG C + G  L+++ E+   G+L   L       V             L+  H + 
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138

Query: 453 IVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------------ESSFTL 498
               +A  + +L     ++ IHRD+ A NI+L      ++                    
Sbjct: 139 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 195

Query: 499 TAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
               + ++APE +     T ++DV+S+GV++ E+             +  V + +     
Sbjct: 196 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRR 249

Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
             EG  + A D      +   EM + +   L C + + S RP+   + + L N
Sbjct: 250 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 293

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 2e-39
 Identities = 47/273 (17%), Positives = 99/273 (36%), Gaps = 36/273 (13%)

Query: 353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGW 412
           +++LG G  G V + +   +    A+K  +   + + E           +  ++V+++  
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA---SQCPHIVRIVDV 73

Query: 413 C----AEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
                A +  LL+V E +  G L   +    +     +      I+  +  A+ YLH   
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA--FTEREASEIMKSIGEAIQYLH--- 128

Query: 469 EQQVIHRDIKASNIMLDANFNARL--------------ESSFTLTAGTMGYLAPEYLQYG 514
              + HRD+K  N++  +     +               +S T    T  Y+APE L   
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 188

Query: 515 TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
              +  D++S GV++  + CG  P             +    G+    R+ +        
Sbjct: 189 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------LAISPGMKTRIRMGQYEFPNPEW 241

Query: 575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
           +   +E+K L+    +    + + R ++     
Sbjct: 242 SEVSEEVKMLI---RNLLKTEPTQRMTITEFMN 271

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  146 bits (368), Expect = 3e-39
 Identities = 64/307 (20%), Positives = 108/307 (35%), Gaps = 56/307 (18%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAE---LSIIACLR 402
           F  +RI+GRG FG VY    A +G + A+K          +G+T  L E   LS+++   
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
              +V +        +L  + + M  G L   L Q        S          +   L 
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF----SEADMRFYAAEIILGLE 121

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------ESSFTLTAGTMGYLAPEYLQ 512
           ++H    + V++RD+K +NI+LD + + R+          +     + GT GY+APE LQ
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ 178

Query: 513 YGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
            G A     D FS G ++ ++  G  P  +     K       +              + 
Sbjct: 179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 238

Query: 572 LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF----------------QILNNEAEP 615
           L        ++ LL         D + R                        +   +  P
Sbjct: 239 L--------LEGLL-------QRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 283

Query: 616 LVVPKLK 622
            ++P   
Sbjct: 284 PLIPPRG 290

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  144 bits (364), Expect = 3e-39
 Identities = 55/284 (19%), Positives = 108/284 (38%), Gaps = 26/284 (9%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKNLVQL 409
           R LG G+FG V+      +G   A+K  K     + +       E  +++ + H  ++++
Sbjct: 10  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
            G   +  ++ ++ +Y+  G L  +L +                   +  AL YLH    
Sbjct: 70  WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF----PNPVAKFYAAEVCLALEYLH---S 122

Query: 470 QQVIHRDIKASNIMLDANFNARL---------ESSFTLTAGTMGYLAPEYLQYGTATEKT 520
           + +I+RD+K  NI+LD N + ++                 GT  Y+APE +      +  
Sbjct: 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSI 182

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           D +S+G+++ E+  G  P            +++            E     L+     D 
Sbjct: 183 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--FNEDVKDLLSRLITRDL 240

Query: 581 MKRLLLVGLSCANPDSSARPSMRRV--FQILNNEAEPLVVPKLK 622
            +RL  +       D    P  + V   ++L+   E    P ++
Sbjct: 241 SQRLGNLQNGTE--DVKNHPWFKEVVWEKLLSRNIETPYEPPIQ 282

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  142 bits (359), Expect = 6e-39
 Identities = 56/286 (19%), Positives = 98/286 (34%), Gaps = 49/286 (17%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR----------SKHSHEGKTEFLAELSIIA 399
           +    ILGRG    V +     +    AVK           ++   E +   L E+ I+ 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 400 CLR-HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLA 458
            +  H N++QL           LV++ M  G L   L +       LS      I+  L 
Sbjct: 65  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMRALL 120

Query: 459 SALTYLHQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLA 507
             +  LH   +  ++HRD+K  NI+LD + N +L                   GT  YLA
Sbjct: 121 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLA 177

Query: 508 PEYLQ------YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE 561
           PE ++      +    ++ D++S GV++  +  G  P     +   +  ++         
Sbjct: 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG------N 231

Query: 562 GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
            +         +     D +K L+             R +      
Sbjct: 232 YQFGSPEWDDYS-----DTVKDLV---SRFLVVQPQKRYTAEEALA 269

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 5e-38
 Identities = 67/339 (19%), Positives = 114/339 (33%), Gaps = 55/339 (16%)

Query: 335 PREFSYRELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAE 394
           P+E SY + +          ++G G+FG VY+A    SG + A+K+             E
Sbjct: 17  PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRE 63

Query: 395 LSIIACLRHKNLVQLLGWCAEKGE------LLLVYEYMPNGSLDRMLYQDSENGVLLSWY 448
           L I+  L H N+V+L  +    GE      L LV +Y+P        +        L   
Sbjct: 64  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVI 122

Query: 449 HRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---------- 498
           +    +  L  +L Y+H      + HRDIK  N++LD +        F            
Sbjct: 123 YVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179

Query: 499 --TAGTMGYLAP-EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV 555
                +  Y AP         T   DV+S G V+ E+  G+     ++   ++V ++  V
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-V 238

Query: 556 WGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANP------------DSSARPSMR 603
            G     +I E         F + +      V      P              +AR +  
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298

Query: 604 RVFQ------ILNNEAEPLVVPKLKPCLTFSSVSLTLED 636
                     + +   +            F++  L+   
Sbjct: 299 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNP 337

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (352), Expect = 2e-37
 Identities = 58/298 (19%), Positives = 105/298 (35%), Gaps = 54/298 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR----SKHSHEGKTEFLAELSIIA-CLRHKNLVQ 408
           ++LG+G+FG V+ A F  +    A+K          +     + E  +++    H  L  
Sbjct: 8   KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67

Query: 409 LLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC 468
           +      K  L  V EY+  G L   +    +                +   L +L    
Sbjct: 68  MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFL---H 120

Query: 469 EQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGTA 516
            + +++RD+K  NI+LD + + ++            ++      GT  Y+APE L     
Sbjct: 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180

Query: 517 TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF 576
               D +S+GV++ E+  G+ P   + E      L   +             D      +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIR-----------MDNPFYPRW 225

Query: 577 NEDEMKRLLLVGLSCANPDSSARPSMRRVF------------QILNNEAEPLVVPKLK 622
            E E K LL   +     +   R  +R               ++   E +P   PK+K
Sbjct: 226 LEKEAKDLL---VKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 280

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 2e-37
 Identities = 60/306 (19%), Positives = 119/306 (38%), Gaps = 47/306 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE------FLAELSIIACLRHKNLV 407
             LG G F  VYKA   ++  + A+K+ K  H  + +       L E+ ++  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 408 QLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQE 467
            LL     K  + LV+++M       +     +N ++L+  H    ++     L YLH  
Sbjct: 64  GLLDAFGHKSNISLVFDFMET----DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH-- 117

Query: 468 CEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQYGT 515
            +  ++HRD+K +N++LD N   +L              ++T    T  Y APE L    
Sbjct: 118 -QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR 176

Query: 516 A-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG 574
                 D+++ G ++ E+      +  +++  ++  + +   G   E +  +        
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE-TLGTPTEEQWPDMCSLPDYV 235

Query: 575 AFNE--------------DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLVV 618
            F                D++  L+         +  AR +  +  +    +N   P   
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLI---QGLFLFNPCARITATQALKMKYFSNRPGPTPG 292

Query: 619 PKL-KP 623
            +L +P
Sbjct: 293 CQLPRP 298

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 8e-37
 Identities = 52/279 (18%), Positives = 96/279 (34%), Gaps = 49/279 (17%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-------SKHSHEGKTEFLAELSIIACLRHKNL 406
             LG G F  V K    S+G   A K        S      + +   E+SI+  ++H N+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           + L      K +++L+ E +  G L   L +       L+       +  + +    ++ 
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNG---VYY 128

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEYL 511
               Q+ H D+K  NIML      +                 + F    GT  ++APE +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188

Query: 512 QYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR 571
            Y     + D++S GV+   +  G  P   +T+   + N              + A +  
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN--------------VSAVNYE 234

Query: 572 LNGAFNED---EMKRLLLVGLSCANPDSSARPSMRRVFQ 607
               +  +     K  +         D   R +++   Q
Sbjct: 235 FEDEYFSNTSALAKDFI---RRLLVKDPKKRMTIQDSLQ 270

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (347), Expect = 1e-36
 Identities = 58/321 (18%), Positives = 112/321 (34%), Gaps = 40/321 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR-SKHSHEGKTE-FLAELSIIACLRHKNLVQLLG 411
             +G GA+G V  AY   +    A+K+ S   H+   +  L E+ I+   RH+N++ +  
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
                    +   Y+    +   LY+  +    LS  H    +  +   L Y+H      
Sbjct: 74  IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---SAN 129

Query: 472 VIHRDIKASNIMLDANFNARL---------------ESSFTLTAGTMGYLAPEYLQYGTA 516
           V+HRD+K SN++L+   + ++                   T    T  Y APE +     
Sbjct: 130 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 189

Query: 517 -TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGA 575
            T+  D++S G ++ E+   R     +    ++ +++  +     E        K  N  
Sbjct: 190 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 249

Query: 576 FNEDEMKRLLLVGL-------------SCANPDSSARPSMRRVFQ--ILNNEAEPLVVPK 620
            +     ++    L                  +   R  + +      L    +P   P 
Sbjct: 250 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 309

Query: 621 LKPCLTFSSVSLTLEDIVSED 641
            +    F    + L+D+  E 
Sbjct: 310 AEAPFKF---DMELDDLPKEK 327

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  136 bits (343), Expect = 2e-36
 Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 42/293 (14%)

Query: 342 ELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL 401
           ELR   R +   R +G G+FG++Y     ++G   A+K      +   +   E  I   +
Sbjct: 2   ELRVGNR-YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-QLHIESKIYKMM 59

Query: 402 RHKNLVQLLGWCAEKGE-LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASA 460
           +    +  + WC  +G+  ++V E +     D   +   +     S    L +   + S 
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISR 115

Query: 461 LTYLHQECEQQVIHRDIKASNIM------------LDANFNARLESSFTLT--------- 499
           + Y+H    +  IHRD+K  N +            +D     +   + T           
Sbjct: 116 IEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172

Query: 500 -AGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL 558
             GT  Y +         + + D+ S G V++    G  P +      K           
Sbjct: 173 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI---- 228

Query: 559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN 611
               + +    + L   +   E    L     C +     +P    + Q+  N
Sbjct: 229 --SEKKMSTPIEVLCKGYPS-EFATYL---NFCRSLRFDDKPDYSYLRQLFRN 275

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 3e-36
 Identities = 51/283 (18%), Positives = 99/283 (34%), Gaps = 32/283 (11%)

Query: 354 RILGRGAFGNVYKAY-FASSGSVAAVKRSKHSHEGKTE------FLAELSIIACLRHKNL 406
             +G GA+G V+KA    + G   A+KR +     +         +A L  +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSL--DRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
           V+L   C            +    +  D   Y D      +      +++  L   L +L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQY 513
           H     +V+HRD+K  NI++ ++   +L           + + T    T+ Y APE L  
Sbjct: 133 H---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN 573
            +     D++S G +  E+   +      ++  ++  ++D +     E    + A  R  
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249

Query: 574 GAFNEDEMKRLLLVGLS---------CANPDSSARPSMRRVFQ 607
                 +     +  +          C   + + R S      
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-35
 Identities = 57/305 (18%), Positives = 113/305 (37%), Gaps = 43/305 (14%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNL 406
           F     +G G +G VYKA    +G V A+K+      +    +  + E+S++  L H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 407 VQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQ 466
           V+LL     + +L LV+E++       M          +      + +  L   L +   
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---IPLPLIKSYLFQLLQGLAFC-- 118

Query: 467 ECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPE-YLQY 513
               +V+HRD+K  N++++     +L              ++T    T+ Y APE  L  
Sbjct: 119 -HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN 573
              +   D++S G +  E+   R     ++E  ++  +   +            +     
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 574 GAFNE--------------DEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLV 617
            +F +              ++ + LL       + D + R S +         +  +P  
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLL---SQMLHYDPNKRISAKAALAHPFFQDVTKP-- 292

Query: 618 VPKLK 622
           VP L+
Sbjct: 293 VPHLR 297

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 4e-35
 Identities = 52/275 (18%), Positives = 88/275 (32%), Gaps = 51/275 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLR--HK 404
            +LG G FG+VY     S     A+K  +             T    E+ ++  +     
Sbjct: 10  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69

Query: 405 NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
            +++LL W       +L+ E             +      L      +    +  A+ + 
Sbjct: 70  GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHC 126

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARLESSF-----------TLTAGTMGYLAPEYLQY 513
                  V+HRDIK  NI++D N        F           T   GT  Y  PE+++Y
Sbjct: 127 ---HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 183

Query: 514 GTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL 572
                    V+S G+++ ++ CG  P E + E                    I       
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------------IIRGQVFF 223

Query: 573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
               +  E + L+     C     S RP+   +  
Sbjct: 224 RQRVSS-ECQHLI---RWCLALRPSDRPTFEEIQN 254

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 4e-35
 Identities = 61/335 (18%), Positives = 117/335 (34%), Gaps = 40/335 (11%)

Query: 338 FSYRELRSATRGFHSN----RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTE 390
           F  +E+        +     + +G GA+G V  A    +G+  A+K   R   S      
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 391 FLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHR 450
              EL ++  +RH+N++ LL        L    ++                   L     
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRI 123

Query: 451 LNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR---------LESSFTLTAG 501
             +V  +   L Y+H      +IHRD+K  N+ ++ +   +          +S  T    
Sbjct: 124 QFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVV 180

Query: 502 TMGYLAPE-YLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYA 560
           T  Y APE  L +   T+  D++S G ++ E+  G+   +      ++  ++       A
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 240

Query: 561 EGRIIEAADKRLNGAFNEDEMKRLLLVGL-------------SCANPDSSARPSMRRV-- 605
           E      +D+  N      E+++     +                  D+  R +      
Sbjct: 241 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300

Query: 606 ---FQILNNEAEPLVVPKLKPCLTFSSVSLTLEDI 637
              F+ L++  +   V K     +F  V  TL++ 
Sbjct: 301 HPYFESLHDTEDEPQVQKYDD--SFDDVDRTLDEW 333

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  128 bits (322), Expect = 3e-34
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKN 193
           +  VA+E DT  +    DP   HIG+DI S+ S KTA       ++++G V TA I Y +
Sbjct: 2   DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----WNMQNGKVGTAHIIYNS 56

Query: 194 DLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTS 253
             + L   +SY      +  +  ++DL   L   + VG SAST    E + I SWSF + 
Sbjct: 57  VDKRLSAVVSYP--NADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 83.8 bits (207), Expect = 7e-19
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 26  NFDFTSFNLRNITLLGD-SYLRNGVIGLTRE---LGVPASSSGSLIYNNPVPFFDQETNT 81
            F+  S + +++ L GD +   +G + LTR         SS G  ++  PV  ++  +  
Sbjct: 129 MFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAV 187

Query: 82  TASFTSRFSFSINNVNPSSFGDGLAFFISPDNQIL--GSAGGCLGLVNSS 129
            ASF + F+F I + +     DG+AFFIS  +  +  GS G  LGL   +
Sbjct: 188 VASFEATFTFLIKSPDSHP-ADGIAFFISNIDSSIPSGSTGRLLGLFPDA 236

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  130 bits (327), Expect = 7e-34
 Identities = 56/295 (18%), Positives = 96/295 (32%), Gaps = 48/295 (16%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTE----FLAELSIIACLRHKNLVQL 409
           + LG G+FG V       SG+  A+K        K +     L E  I+  +    LV+L
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 410 LGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECE 469
                +   L +V EY+  G +   L +        S  H       +     YLH    
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLH---S 159

Query: 470 QQVIHRDIKASNIMLDANFNARLE---------SSFTLTAGTMGYLAPEYLQYGTATEKT 520
             +I+RD+K  N+++D     ++                 GT   LAPE +      +  
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAE--GRIIEAADKRLNGAFNE 578
           D ++ GV++ E+A G  P   +      + + + +                  L      
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQP----IQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275

Query: 579 DEMKRLLLVGLSCANPDSSARPSMRRVFQ-----------ILNNEAEPLVVPKLK 622
           D  KR             + +  +  +             I   + E   +PK K
Sbjct: 276 DLTKRF-----------GNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 6e-33
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 23/211 (10%)

Query: 350 FHSNRILGRGAFGNVYKAYFASSGSVAAVKRSK----HSHEGKTEFLAELSIIACLRHKN 405
           F   ++LG+G FG V      ++G   A+K  +     + +     + E  ++   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 406 LVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLH 465
           L  L         L  V EY   G L   L ++     + +          + SAL    
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSAL---E 119

Query: 466 QECEQQVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYLQY 513
               + V++RDIK  N+MLD + + ++             ++     GT  YLAPE L+ 
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETE 544
                  D +  GVV+ E+ CGR P   +  
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  122 bits (308), Expect = 1e-31
 Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 43/288 (14%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           R +G G+FG +++     +    A+K      +   +   E      L     +  + + 
Sbjct: 11  RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 414 AEKGE-LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQV 472
            ++G   +LV + +     D +       G   S          + + +  +H+   + +
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLL----DLCGRKFSVKTVAMAAKQMLARVQSIHE---KSL 122

Query: 473 IHRDIKASNIMLDANFNAR------------------------LESSFTLTAGTMGYLAP 508
           ++RDIK  N ++    +                                  +GT  Y++ 
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182

Query: 509 EYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA 568
                   + + D+ + G V +    G  P +                   +        
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL----- 237

Query: 569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL 616
            + L   F E E  + +       N    A P    +  + +   E L
Sbjct: 238 -RELCAGFPE-EFYKYM---HYARNLAFDATPDYDYLQGLFSKVLERL 280

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  121 bits (305), Expect = 2e-31
 Identities = 46/280 (16%), Positives = 100/280 (35%), Gaps = 33/280 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAA--VKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLG 411
             +G G +G VYKA      + A   ++  K      +  + E+SI+  L+H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ 471
               K  L+LV+E++       +   +      L      + ++ L + + Y H   +++
Sbjct: 68  VIHTKKRLVLVFEHLDQDLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCH---DRR 120

Query: 472 VIHRDIKASNIMLDANFNARL-------------ESSFTLTAGTMGYLAPEYLQYGTATE 518
           V+HRD+K  N++++     ++                               +     + 
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180

Query: 519 KTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG--RIIEAADKRLNGAF 576
             D++S G +  E+  G       +E  +++ +   +    ++    + E      N   
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240

Query: 577 NEDEMKRLLLVGLS---------CANPDSSARPSMRRVFQ 607
            E       L GL              D + R + ++  +
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 5e-31
 Identities = 49/282 (17%), Positives = 95/282 (33%), Gaps = 35/282 (12%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKR---SKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             +G G +G V+KA    +  + A+KR           +  L E+ ++  L+HKN+V+L 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                  +L LV+E+            +              +   L   L  L     +
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKYFDSCN-------GDLDPEIVKSFLFQLLKGLGFCHSR 120

Query: 471 QVIHRDIKASNIMLDANFNARL------------ESSFTLTAGTMGYLAPEYL-QYGTAT 517
            V+HRD+K  N++++ N   +L               ++    T+ Y  P+ L      +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
              D++S G +  E+A   RP+    +    +  +  + G   E +            + 
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240

Query: 578 EDEMKRLLLVGL------------SCANPDSSARPSMRRVFQ 607
                  L+  +            +    +   R S     Q
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 5e-30
 Identities = 52/299 (17%), Positives = 110/299 (36%), Gaps = 55/299 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKT---EFLAELSIIACLRHKNLVQLL 410
             +G+G FG V+KA    +G   A+K+    +E +      L E+ I+  L+H+N+V L+
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 411 GWCAE--------KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
             C          KG + LV+++  +     +     +     +      ++  L +   
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNG-- 129

Query: 463 YLHQECEQQVIHRDIKASNIMLDANFNARL----------------ESSFTLTAGTMGYL 506
            L+     +++HRD+KA+N+++  +   +L                 + +T    T+ Y 
Sbjct: 130 -LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 188

Query: 507 APEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV---------- 555
            PE L          D++  G ++ E+      ++  TE H++  +              
Sbjct: 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 248

Query: 556 ---WGLYAEGRIIEAADK----RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ 607
              + LY +  +++   +    RL     +     L+         D + R        
Sbjct: 249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI---DKLLVLDPAQRIDSDDALN 304

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 6e-29
 Identities = 58/334 (17%), Positives = 105/334 (31%), Gaps = 61/334 (18%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
           + +G GA G V  AY A      A+K   R   +         EL ++ C+ HKN++ LL
Sbjct: 23  KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82

Query: 411 GWCA------EKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYL 464
                     E  ++ LV E M       +  +               ++  +   + +L
Sbjct: 83  NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-------RMSYLLYQMLCGIKHL 135

Query: 465 HQECEQQVIHRDIKASNIMLDANFNARL-----------ESSFTLTAGTMGYLAPEYLQY 513
           H      +IHRD+K SNI++ ++   ++               T    T  Y APE +  
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

Query: 514 GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN 573
               E  D++S G ++ E+   +          +   +++ + G      + +      N
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL-GTPCPEFMKKLQPTVRN 251

Query: 574 GAFNEDEMKRLLLVGL-------------------------SCANPDSSARPSMRRV--- 605
              N  +   L    L                              D + R S+      
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

Query: 606 --FQILNNEAEPLVVPKLKPCLTFSSVSLTLEDI 637
               +  + AE    P             T+E+ 
Sbjct: 312 PYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW 345

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 2e-27
 Identities = 60/315 (19%), Positives = 111/315 (35%), Gaps = 36/315 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVK---RSKHSHEGKTEFLAELSIIACLRHKNLVQLL 410
             +G GA+G+V  A+   +G   AVK   R   S         EL ++  ++H+N++ LL
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 411 GWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
                   L    +      L      +      L+  H   ++  +   L Y+H     
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 140

Query: 471 QVIHRDIKASNIM---------LDANFNARLESSFTLTAGTMGYLAPE-YLQYGTATEKT 520
            +IHRD+K SN+          LD       +   T    T  Y APE  L +    +  
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200

Query: 521 DVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDE 580
           D++S G ++ E+  GR          ++  ++  V    AE     +++   N   +  +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260

Query: 581 MKRLLLVGL-------------SCANPDSSARPSMRRV-----FQILNNEAEPLVVPKLK 622
           M ++    +                  DS  R +  +      F   ++  +  V     
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYD 320

Query: 623 PCLTFSSVSLTLEDI 637
              +F S  L +++ 
Sbjct: 321 Q--SFESRDLLIDEW 333

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 2e-27
 Identities = 62/323 (19%), Positives = 116/323 (35%), Gaps = 53/323 (16%)

Query: 341 RELRSATRGFHSNRI----------LGRGAFGNVYKAYFAS---SGSVAAVKRSKHSH-- 385
            ELR+A    H+ ++          LG GA+G V+     S   +G + A+K  K +   
Sbjct: 7   HELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV 66

Query: 386 ---EGKTEFLAELSIIACLRHK-NLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSEN 441
              +       E  ++  +R    LV L      + +L L+ +Y+  G L   L Q    
Sbjct: 67  QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF 126

Query: 442 GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARL--------- 492
                  +       +   +  L    +  +I+RDIK  NI+LD+N +  L         
Sbjct: 127 TEHEVQIY-------VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179

Query: 493 ----ESSFTLTAGTMGYLAPEYLQYGTA--TEKTDVFSYGVVVLEVACGRRPIERETEGH 546
                       GT+ Y+AP+ ++ G +   +  D +S GV++ E+  G  P   + E +
Sbjct: 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 239

Query: 547 KMVNLVDWVWGLYAE--GRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSS---ARPS 601
               +   +          +   A   +     +D  KR     L C   D+        
Sbjct: 240 SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR-----LGCGPRDADEIKEHLF 294

Query: 602 MRRV--FQILNNEAEPLVVPKLK 622
            +++    +   +      P ++
Sbjct: 295 FQKINWDDLAAKKVPAPFKPVIR 317

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  111 bits (277), Expect = 2e-27
 Identities = 47/241 (19%), Positives = 90/241 (37%), Gaps = 28/241 (11%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGW 412
           R LGRG +  V++A   ++     VK  K     K +   E+ I+  LR   N++ L   
Sbjct: 41  RKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADI 98

Query: 413 CAEKGE--LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQ 470
             +       LV+E++ N    ++          L+ Y     +  +  AL Y H     
Sbjct: 99  VKDPVSRTPALVFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHS---M 148

Query: 471 QVIHRDIKASNIMLDANFNARLESSF------------TLTAGTMGYLAPE-YLQYGTAT 517
            ++HRD+K  N+M+D          +             +   +  +  PE  + Y    
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 208

Query: 518 EKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFN 577
              D++S G ++  +   + P     + +  +  +  V G       I+  +  L+  FN
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268

Query: 578 E 578
           +
Sbjct: 269 D 269

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  107 bits (267), Expect = 7e-27
 Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 25/239 (10%)

Query: 17  FSFVLSNNMNFDFTS-FNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFF 75
           F +  S        S   +      G++      I +   L    S  GS+       F 
Sbjct: 5   FEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLK---SQRGSVWTKTKAAF- 60

Query: 76  DQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNK 135
                   ++    +F +         DGLA + + +  + G   G              
Sbjct: 61  -------ENWEVEVTFRVTGRGRIG-ADGLAIWYTENQGLDGPVFGSAD--------MWN 104

Query: 136 FVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKS----GNVITAWIDY 191
            V I FD+  +    +     +  +   +      D   Q +                  
Sbjct: 105 GVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKI 164

Query: 192 KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF 250
               + L V ++                 +  +    + G SA+T G  + H + S+  
Sbjct: 165 TYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLT 223

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  105 bits (261), Expect = 4e-25
 Identities = 44/229 (19%), Positives = 79/229 (34%), Gaps = 30/229 (13%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWC 413
           R LG G F  V+ A    + +  A+K  +           E+ ++  +   +  +     
Sbjct: 19  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 414 AEKGELLLVY--EYMPNGSLDRMLYQDSENGVLL----------SWYHRLNIVVGLASAL 461
           A     LL +     PNG    M+++     +L              +   I   L   L
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 462 TYLHQECEQQVIHRDIKASNIMLDANFNARLESSFTL---------------TAGTMGYL 506
            Y+H+ C   +IH DIK  N++++   +        +               +  T  Y 
Sbjct: 139 DYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196

Query: 507 APEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV 555
           +PE L         D++S   ++ E+  G    E + EGH      D +
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD-EGHSYTKDDDHI 244

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.3 bits (195), Expect = 2e-17
 Identities = 41/245 (16%), Positives = 70/245 (28%), Gaps = 43/245 (17%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
            N  + L N +        L   TL     L  G   LT       ++ GSL        
Sbjct: 2   WNKGYSLPNLLEVTDQQKELSQWTLGDKVKLEEGRFVLTP----GKNTKGSLWLKPEYSI 57

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN 134
            D       + T  ++F       S+   GLAF++   N+   +          + L   
Sbjct: 58  KD-------AMTIEWTFRSFGFRGST-KGGLAFWLKQGNEGDSTELFGGSSKKFNGL--- 106

Query: 135 KFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKND 194
               I          DD     +   ++        D         S    +    Y++ 
Sbjct: 107 ---MILLRL------DDKLGESVTAYLN--------DGTKDLDIESSPYFASCLFQYQDS 149

Query: 195 LRMLKVFMSYSNLKPVTPLLKVNIDLSGYLK---------GNMYVGFSASTEGSTELHMI 245
           +    + ++Y+ L     LLK+ +D     +             +G SA  + S E   I
Sbjct: 150 MVPSTLRLTYNPLD--NHLLKLQMDNRVCFQTRKVKFMGSSPFRIGTSAINDASKESFEI 207

Query: 246 QSWSF 250
                
Sbjct: 208 LKMKL 212

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 71.7 bits (175), Expect = 6e-15
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 354 RILGRGAFGNVYKAYFASSGSVAAVKRSKHS-----------HEGKTEFLAELSIIACLR 402
           +++G G    V+  Y +       VK  K               G   F       A   
Sbjct: 6   KLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 403 HKNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALT 462
            + L +L G    K     VY +  N  L  M   D++    +   +   ++  +   + 
Sbjct: 65  FRALQKLQGLAVPK-----VYAWEGNAVL--MELIDAKELYRVRVENPDEVLDMILEEVA 117

Query: 463 YLHQECEQQVIHRDIKASNIMLD 485
             +      ++H D+   N+++ 
Sbjct: 118 KFYHRG---IVHGDLSQYNVLVS 137

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.2 bits (148), Expect = 4e-11
 Identities = 37/237 (15%), Positives = 62/237 (26%), Gaps = 43/237 (18%)

Query: 15  LNFSFVLSNNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPF 74
           L+  + L + +N         N      + L  G I LT       +S GSL        
Sbjct: 6   LSSDYSLPDLINTRKVP---NNWQTGEQASLEEGRIVLTS----NQNSKGSLWLKQGFDL 58

Query: 75  FDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKN 134
            D       SFT  ++F     +  +   G++F+   D          +           
Sbjct: 59  KD-------SFTMEWTFRSVGYSGQT-DGGISFWFVQD--------SNIPRDKQLYNGPV 102

Query: 135 KF--VAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQ--GIDLK---SGNVITA 187
            +  + +  D     +          L+       KT           +    S    T 
Sbjct: 103 NYDGLQLLVDN----NGPLGPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPSTI 158

Query: 188 WIDY-KNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELH 243
            + Y   D  +LKV +            KV      Y      +G +A         
Sbjct: 159 RVTYDLEDDNLLKVQVDNKVCFQTR---KVRFPSGSY-----RIGVTAQNGAVNNNA 207

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	645
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	100.0
d1leda_	243	Legume lectin {West-central african legume (Griffo	100.0
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	100.0
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	100.0
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	100.0
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	100.0
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	100.0
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	100.0
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	100.0
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	100.0
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	100.0
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	100.0
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.96
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.95
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.9
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.84
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.82
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.8
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.15
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.27
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.05
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.92
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	92.9
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	91.0

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=1.3e-56  Score=442.65  Aligned_cols=225  Identities=34%  Similarity=0.558  Sum_probs=201.7

Q ss_pred             ceeEEeCCCCC---CCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           24 NMNFDFTSFNL---RNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        24 ~~~f~~~~f~~---~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      +++|+|++|+.   ++|+|+|||.+.+|.|+||+....   ...++|||+|++||+||+..+++++||+|+|+|.|....
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~~   80 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKITG   80 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEECS
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEecCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCCC
Confidence            47999999973   689999999999999999986432   356899999999999999999999999999999998754


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCCCC---CCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLT---KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL  174 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~---~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~  174 (645)
                       ..+||||||||+|....++..|++||+++..+.+   .+++|||||||++|.+++||++||||||+||+.|.++.++. 
T Consensus        81 -~~~gDGlAFvl~p~~~~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~~~-  158 (236)
T d1hqla_          81 -NGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWE-  158 (236)
T ss_dssp             -SCCCCEEEEEEECTTCCCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEECC-
T ss_pred             -CCCCceEEEEEeCCCCCCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccccc-
Confidence             6789999999999888788899999999876543   38999999999999999999999999999999998887764 


Q ss_pred             cccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc-cceeeeeeeeeeec
Q 041096          175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS-TELHMIQSWSFQTS  253 (645)
Q Consensus       175 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~-~~~~~i~sw~f~~~  253 (645)
                       ..++.+|+.++|||+||+.+++|+|+|++.  ++..|+|++.|||+.+|+++||||||||||.. .+.|+|++|+|+++
T Consensus       159 -~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~--~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWsF~s~  235 (236)
T d1hqla_         159 -DSDIFSGKIATARISYDGSAEILTVVLSYP--DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSN  235 (236)
T ss_dssp             -HHHHTSCSCEEEEEEEETTTTEEEEEEEET--TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEEE
T ss_pred             -cccccCCCEEEEEEEEeCCCcEEEEEEecC--CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeEeEec
Confidence             356889999999999999999999999975  46688999999999999999999999999975 67899999999975

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=100.00  E-value=1.3e-55  Score=436.87  Aligned_cols=224  Identities=34%  Similarity=0.551  Sum_probs=199.9

Q ss_pred             CceeEEeCCCC------CCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEE
Q 041096           23 NNMNFDFTSFN------LRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSI   93 (645)
Q Consensus        23 ~~~~f~~~~f~------~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i   93 (645)
                      ++++|+|++|+      ..||+|+|||.+.+|.|+||+....   ..+++|||+|++||+||++ +++++||+|+|+|.|
T Consensus         2 ~s~sF~f~~F~~~~~~~~~~l~l~G~A~~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~-t~~~asFsT~F~f~i   80 (243)
T d1leda_           2 NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDS-TGKAASFYTSFTFLL   80 (243)
T ss_dssp             CCCEEEESCBCCTTSCTTTSEEEEETCEEETBEEECSCBCTTSCBCSSEEEEEEESSCEECBCT-TSCBCEEEEEEEEEE
T ss_pred             CceEEEcCCCCCCCCCCCCcEEEeeeeEEcCCEEEeccCCCCCCccccceEEEEeCCCeEecCC-CCcEeeEEEEEEEEc
Confidence            57899999995      4689999999999999999985422   3568999999999999995 789999999999988


Q ss_pred             eeCCCCCCCCceEEEEecCCCCCCCCCCccccccCCCCC---CCcEEEEEeeCCCCCCCCCCCCCeeeeecCCccccccc
Q 041096           94 NNVNPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLT---KNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTA  170 (645)
Q Consensus        94 ~~~~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~---~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~  170 (645)
                      .+.. ..+||||||||+|....++..|++||+++..+.+   .+++|||||||++|.+++||++||||||+|++.|.++.
T Consensus        81 ~~~~-~~~gdGlAF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~d~~~nHVgIdvns~~s~~~~  159 (243)
T d1leda_          81 KNYG-APTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATT  159 (243)
T ss_dssp             EESS-SSCBCEEEEEEEETTCCCCCCGGGTTTCCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEE
T ss_pred             CCCC-CCCCCceEEEEcCCCCCCCCCccccccccccccCCCccCcEEEEEEeCccccccCCCCCCceEEEecCccccccc
Confidence            7764 5679999999999888778899999999876543   38999999999999999999999999999999999888


Q ss_pred             CCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeee
Q 041096          171 DPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF  250 (645)
Q Consensus       171 ~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f  250 (645)
                      ++..  .++.+|+.++|||+||+.+++|+|+|++.  ++..|++++.|||+.+|+++||||||||||. .|.|+|++|+|
T Consensus       160 ~~~~--~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~--~~~~p~ls~~idL~~~l~~~vyvGFSAsTG~-~~~h~I~sWsF  234 (243)
T d1leda_         160 RWEN--DDAYGSSIATAHITYDARSKILTVLLSYE--HGRDYILSHVVDLAKVLPQKVRIGFSAGVGY-DEVTYILSWHF  234 (243)
T ss_dssp             ECCH--HHHTSCCEEEEEEEEETTTTEEEEEEEET--TSCEEEEEEECCHHHHSCSEEEEEEEEEECB-SEEEEEEEEEE
T ss_pred             cccc--CCcccCceeEEEEEEECCCCEEEEEEeeC--CCCCceEEEecCHHHhcCCcEEEEEEcccCC-cceeeEEEEEE
Confidence            7643  46888999999999999999999999875  4678999999999999999999999999995 69999999999


Q ss_pred             eec
Q 041096          251 QTS  253 (645)
Q Consensus       251 ~~~  253 (645)
                      +++
T Consensus       235 ~s~  237 (243)
T d1leda_         235 FST  237 (243)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            986

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=100.00  E-value=5e-54  Score=426.68  Aligned_cols=227  Identities=30%  Similarity=0.508  Sum_probs=200.2

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC-CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC-C
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV-PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV-N   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-~   97 (645)
                      ++++|+|++|+  ..||+|+|||.+ .+|.|+||+.... ..+++|||+|++||+||++.+++++||+|+|+|.|... +
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~G~a~y~~Pv~l~~~~t~~~~sF~t~F~f~i~~~~~   81 (240)
T d1fx5a_           2 DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSAN   81 (240)
T ss_dssp             CEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESSC
T ss_pred             CceEEECCCCCCCCCCEEEeeeeEecCCCEEEccCCCCCCccceeEEEecCCCceeecCCCCceeeeEEEEEEEEeCCCC
Confidence            57899999997  468999999987 5789999986432 35688999999999999999999999999999999765 3


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCCC-CCCcEEEEEeeCCCCC-CCCCCCCCeeeeecCCcccccccCCCcc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNKFVAIEFDTRLDP-HFDDPDENHIGLDIDSLESIKTADPILQ  175 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~-~~~~~vAVEFDt~~n~-~~~d~~~~Hvgi~vns~~s~~~~~~~~~  175 (645)
                      +..+||||||||+|...+.+..|++||+++..+. +.+++|||||||++|. +++||++||||||+||+.+..+.++.  
T Consensus        82 ~~~ggdG~AFvl~p~~~~~~~~g~~lGl~~~~~~~~~~~~vAVEFDT~~n~~~~~D~~~nHIgid~ns~~s~~~~~~~--  159 (240)
T d1fx5a_          82 PKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWN--  159 (240)
T ss_dssp             GGGCCCEEEEEEECTTCCCCBCGGGTTTBSSSCCCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEECC--
T ss_pred             CCCCCCcEEEEECCCCCCCCCCCccccccccCCCCccCceEEEEeeccccccccCCCCCCceEEccCCcccccccccc--
Confidence            4568999999999987777889999999987653 3478999999999985 67799999999999999988776653  


Q ss_pred             ccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC-ccceeeeeeeeeeec
Q 041096          176 GIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG-STELHMIQSWSFQTS  253 (645)
Q Consensus       176 ~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~-~~~~~~i~sw~f~~~  253 (645)
                       ..+.+|+.++|||+||+.+++|.|+|++.. ++..|+++..|||+.+|+++||||||||||. ..|.|+|++|+|+++
T Consensus       160 -~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdLs~~l~~~v~vGFSasTG~~~~~~H~I~sWsFsst  236 (240)
T d1fx5a_         160 -KRYGLNNVANVEIIYEASSKTLTASLTYPS-DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTST  236 (240)
T ss_dssp             -CCCSGGGCEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCGGGTSCSEEEEEEEEEEETTSCEEEEEEEEEEEEE
T ss_pred             -cccCCCCeEEEEEEEcCCCCEEEEEEecCC-CceeeEEeEEEchHHhCCCcEEEEEEeECCCCCCceEEEEEEEeEEe
Confidence             467789999999999999999999999765 6778999999999999999999999999995 678999999999986

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=100.00  E-value=4.8e-53  Score=419.11  Aligned_cols=224  Identities=34%  Similarity=0.620  Sum_probs=197.4

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      ++++|+|++|.  ..||+|+|||.+. +|.|+||+.......++|||+|++||+||++.+++++||+|+|+|.|.++. .
T Consensus         2 ~~lsF~f~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~-~   80 (237)
T d1qnwa_           2 DDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKADK-S   80 (237)
T ss_dssp             CSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBSS-S
T ss_pred             CcEEEEcCCCCCCCCCEEEeeceEEcCCCeEEeccCCCCccccEEEEEECCCEEecCCCCcceeeEEEEEEEEEecCC-C
Confidence            57899999996  5689999999984 789999997544467899999999999999999999999999999997764 5


Q ss_pred             CCCCceEEEEecCCCC--CCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCC--CCCCCeeeeecCCcccccccCCCc
Q 041096          100 SFGDGLAFFISPDNQI--LGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTADPIL  174 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~--~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~--d~~~~Hvgi~vns~~s~~~~~~~~  174 (645)
                      .+||||||||+|....  .++.|+++|+.+..+ .+.++.|||||||++|.+++  ||+++|||||+|++.|.++.++  
T Consensus        81 ~ggdG~aF~l~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~vAVEFDT~~n~~~~~~d~~~nHvgid~ns~~s~~~~~~--  158 (237)
T d1qnwa_          81 DGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKW--  158 (237)
T ss_dssp             CCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSSCCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEEEC--
T ss_pred             CCcceeEEEEeCCCCCCCCCCccccccccCCCCCCCcccEEEEEeeceecCCcCCCCCCCCeEEEECCCCCccccccc--
Confidence            6899999999998873  367788899988654 45689999999999998765  5899999999999999877664  


Q ss_pred             cccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCcc--ceeeeeeeeeee
Q 041096          175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWSFQT  252 (645)
Q Consensus       175 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~--~~~~i~sw~f~~  252 (645)
                         ++.+|+.++|||+||+.+++|+|+|++.. +|..|+|++.|||+++|+++||||||||||...  |.|+|++|+|++
T Consensus       159 ---~~~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~p~ls~~vDLs~~l~~~vyvGFSasTG~~~~~q~h~I~sWsF~s  234 (237)
T d1qnwa_         159 ---DWRNGEVADVVITYRAPTKSLTVCLSYPS-DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTS  234 (237)
T ss_dssp             ---CCCTTCCEEEEEEEEGGGTEEEEEEECTT-TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEEEE
T ss_pred             ---ccCCCcEEEEEEEEcCCCcEEEEEEecCC-CCccceEEEEEChHHhCCCcEEEEEEeECCCCCCccEeEEEEeEeEE
Confidence               57889999999999999999999998655 788999999999999999999999999999864  899999999998


Q ss_pred             c
Q 041096          253 S  253 (645)
Q Consensus       253 ~  253 (645)
                      +
T Consensus       235 ~  235 (237)
T d1qnwa_         235 N  235 (237)
T ss_dssp             E
T ss_pred             e
Confidence            6

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=100.00  E-value=4.3e-53  Score=419.62  Aligned_cols=224  Identities=34%  Similarity=0.558  Sum_probs=198.7

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      ++++|+|++|+  ..||+|+|||.+. +|.|+||+....   ..+++|||+|++||+||++.+++++||+|+|+|.|...
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~G~A~i~~~g~l~LT~~~~~~~~~~~~~Gr~~y~~Pv~l~~~~~~~~~sFst~F~f~i~~~   81 (239)
T d1gzca_           2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEeeeeEECCCCeEEccCCCCCCcccccceEEEEeCCCeEecCCCCCceeeEEEEEEEEEecC
Confidence            46899999998  4689999999985 789999996432   24689999999999999999999999999999999754


Q ss_pred             -CCCCCCCceEEEEecCCCCCCCCCCccccccCCCC-CCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCc
Q 041096           97 -NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPIL  174 (645)
Q Consensus        97 -~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~-~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~  174 (645)
                       +...+||||||+|+|.+...+..|++||+++..+. +.++.|||||||++| +++||+++|||||+|++.|.++.++  
T Consensus        82 ~~~~~g~dG~aF~l~p~~~~~~~~~g~lg~~~~~~~~~~~~~vaVEFDT~~n-~~~d~~~~HvgI~vn~~~s~~t~~~--  158 (239)
T d1gzca_          82 YTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQPF--  158 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCCCCCCGGGTTTCSSSSCCGGGCCEEEEEECSCC-TTSCSSSSEEEEEESSSSCSEEEEC--
T ss_pred             CCCCCCCCeEEEEECCCCCCCCCCcccccccccCCCCCccceEEEEEEcccc-CCCCCCCCEEEEEECCccccccCCc--
Confidence             34578999999999998877788999999876543 347899999999999 4689999999999999999887763  


Q ss_pred             cccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC---ccceeeeeeeeee
Q 041096          175 QGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG---STELHMIQSWSFQ  251 (645)
Q Consensus       175 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~sw~f~  251 (645)
                         ++.+|+.++|||+||+.+++|+|+|++.. +|..|.++..|||+++|+++|||||||+||.   ..|.|+|++|+|+
T Consensus       159 ---~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~V~sWsF~  234 (239)
T d1gzca_         159 ---QLDNGQVANVVIKYDAPSKILHVVLVYPS-SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ  234 (239)
T ss_dssp             ---CCCTTCEEEEEEEEETTTTEEEEEEECTT-TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             ---cccCCCEEEEEEEEeCCCcEEEEEEecCC-CCcceeeeeEechHHhcCCcEEEEEEEEcCCCCCCceeeEEEEEEeE
Confidence               68899999999999999999999998765 7889999999999999999999999999994   5689999999999


Q ss_pred             ec
Q 041096          252 TS  253 (645)
Q Consensus       252 ~~  253 (645)
                      ++
T Consensus       235 s~  236 (239)
T d1gzca_         235 AS  236 (239)
T ss_dssp             EE
T ss_pred             ee
Confidence            86

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=100.00  E-value=1.7e-52  Score=414.53  Aligned_cols=220  Identities=36%  Similarity=0.594  Sum_probs=195.1

Q ss_pred             ceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC--CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC-C
Q 041096           24 NMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV--PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV-N   97 (645)
Q Consensus        24 ~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~--~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-~   97 (645)
                      +++|+|++|.  .+||+|+|||.+. +|.|+||+....  ..+++|||+|++||+||++.+++++||+|+|+|.|... +
T Consensus         2 t~sF~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sF~t~F~f~i~~~~~   81 (237)
T d2d3sa1           2 TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFP   81 (237)
T ss_dssp             EEEEEESSCCSSCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSCC
T ss_pred             eEEEEeCCCCCCCCCEEEeeeeEeCCCCeEEcCCCCCCCcccccEEEEEeCCCEEeecCCCCceeeEEEEEEEEeecCCC
Confidence            6899999995  5789999999985 679999985321  24799999999999999999999999999999999764 3


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCcccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      ...+||||||+|+|.+...+..|++||+++..  +.+++|||||||++|.+  ||++||||||+|++.|.++.+     .
T Consensus        82 ~~~g~dGlaFvl~p~~~~~~~~gg~lG~~~~~--~~~~~vaVEFDT~~n~~--d~~~nHvgI~vns~~s~~~~~-----~  152 (237)
T d2d3sa1          82 RPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL--SPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP-----F  152 (237)
T ss_dssp             SSCCCEEEEEEEECSSCCCCBCGGGTTTBCTT--SCCCCEEEEEECSCCTT--CCSSSEEEEEESSSSCSEEEE-----C
T ss_pred             CCCCCCeEEEEeCCCCccCCccccccccccCC--CcCceEEEEEEeecCCC--CCCCCcEEEEcCCCccccccc-----e
Confidence            45678999999999888778899999998763  45789999999999974  999999999999999987765     3


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC-------ccceeeeeeeee
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG-------STELHMIQSWSF  250 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~-------~~~~~~i~sw~f  250 (645)
                      ++.+|+.++|||+||+.+++|+|+|++.. +|..|+++..|||+.+|+++||||||||||.       ..|.|+|++|+|
T Consensus       153 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~ls~~vdL~~~l~~~vyvGFSasTG~~~~~~~~~~e~h~I~sWsF  231 (237)
T d2d3sa1         153 TLDNGGIANVVIKYDASTKILHVVLVFPS-LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF  231 (237)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEEEE
T ss_pred             eecCCCEEEEEEEEECCCCEEEEEEEcCC-CCcccceeeEechHHhCCCcEEEEEEeECCCCccCccccceeeEEEEeEe
Confidence            68899999999999999999999999765 5778899999999999999999999999995       468999999999


Q ss_pred             eec
Q 041096          251 QTS  253 (645)
Q Consensus       251 ~~~  253 (645)
                      +++
T Consensus       232 ss~  234 (237)
T d2d3sa1         232 SAS  234 (237)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            886

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=100.00  E-value=5e-52  Score=416.43  Aligned_cols=224  Identities=32%  Similarity=0.521  Sum_probs=202.2

Q ss_pred             CceeEEeCCCCCCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           23 NNMNFDFTSFNLRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        23 ~~~~f~~~~f~~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      ...+|+|++|+..||+|+|||.+.++.|+||++...   ...++|||+|++||+||++.+++++||+|+|+|+|.+.+..
T Consensus         2 ~~~sF~f~~F~~~~l~l~GdA~~~~~~l~LT~~~~~~~~~~~~~G~a~y~~pv~l~~~~~~~~~sF~t~F~F~i~~~~~~   81 (253)
T d1g7ya_           2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKS   81 (253)
T ss_dssp             EEEEEEESSCCSSCEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSSGG
T ss_pred             cccEEecCCCCcccEEEEeeeEEcCCEEEeCCCCCCCCcccceeEEEEeCCCeEeecCCCCceeeEEEEEEEEEecCCCC
Confidence            457999999999999999999999999999986432   24689999999999999999999999999999999988777


Q ss_pred             CCCCceEEEEecCCCCCCCCCCccccccCCCC-CCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccc
Q 041096          100 SFGDGLAFFISPDNQILGSAGGCLGLVNSSQL-TKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGID  178 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~-~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~  178 (645)
                      .+||||||+|+|.+..++..||++|+++..+. +.++.+||||||++|.++ ||+++|||||+|++.|.++.+     ..
T Consensus        82 ~ggDGlAF~l~~~~~~~~~~~g~lgl~~~~~~~~~~~~vaVEFDT~~n~~~-d~~~~Hvgi~~ns~~s~~~~~-----~~  155 (253)
T d1g7ya_          82 SSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTAS-----WG  155 (253)
T ss_dssp             GCCCEEEEEEEETTCCCCCCGGGTTTCSCSSCCGGGCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEEE-----CC
T ss_pred             CCCCceEEEEeCCCCCCCCCcccccccccCCCCCcCceEEEEEeceecCCC-CCCCCcEEEeeCCcccccccC-----CC
Confidence            89999999999998878888999999986543 447899999999999875 999999999999999987765     36


Q ss_pred             cCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccC---Cccceeeeeeeeeeec
Q 041096          179 LKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE---GSTELHMIQSWSFQTS  253 (645)
Q Consensus       179 ~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~sw~f~~~  253 (645)
                      +.+|+.++|||+||+.+++|.|++++.. +|..|+++..+||+.+|+++|||||||+||   ...|.|+|++|+|++.
T Consensus       156 ~~~g~~~~v~I~Yd~~~~~L~v~l~~~~-~~~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~H~IlsWsF~s~  232 (253)
T d1g7ya_         156 LANGQNAEILITYNAATSLLVASLVHPS-RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASK  232 (253)
T ss_dssp             CCTTSEEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEEEE
T ss_pred             ccCCCEEEEEEEEeCCcEEEEEEEecCC-CCCceEEEEEechhhcCCCcEEEEEEeEcCCCCCcccccEEEEEEeEEe
Confidence            7899999999999999999999998754 788899999999999999999999999999   4679999999999885

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=5.3e-52  Score=410.53  Aligned_cols=224  Identities=34%  Similarity=0.551  Sum_probs=201.4

Q ss_pred             CCceeEEeCCCCCCCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           22 SNNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        22 ~~~~~f~~~~f~~~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      +++++|+|++|+..||+|+|||.+. +|.|+||+....   ..+++|||+|++||+||++.+++++||+|+|+|+|.+.+
T Consensus         1 ~~~~sF~f~~F~~~nl~l~GdA~i~~~g~l~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~f~f~i~~~~   80 (233)
T d1g8wa_           1 SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPN   80 (233)
T ss_dssp             CEEEEEEESSCCGGGEEEEETCEECTTSCEECSCCCSTTCCCTTCEEEEEESSCEECBCTTTCCBEEEEEEEEEECCCCS
T ss_pred             CCceEEECCCCCcCcEEEeccEEECCCCEEEecCCCCCCCcccceeEEEEcCCCeEeecCCCCceeeEEEEEEEEEecCC
Confidence            3578999999999999999999984 789999986432   246899999999999999999999999999999999887


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCcccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      ...+||||||+|+|.+..++..|++||+++.. .++++.|||||||+.|.++ ||+++||||++|++.|..+.+     .
T Consensus        81 ~~~~gDGlAF~l~~~~~~~g~~g~~lG~~~g~-~~~~~~vaVEFDT~~N~~~-d~~~~Hvgi~~n~~~s~~~~~-----~  153 (233)
T d1g8wa_          81 NAGPADGLAFALVPVGSQPKDKGGFLGLFDGS-NSNFHTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTR-----W  153 (233)
T ss_dssp             SCBCCEEEEEEEEETTCCCCCCGGGTTTCCSS-CCCCCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEEE-----C
T ss_pred             CCCCCCeEEEEEecCCCCCCcccccCCccccC-CCcccEEEEEeecccCCCC-CCCCCeEEEECCCcceeeecc-----c
Confidence            77889999999999988788899999998764 4567899999999999886 999999999999999877665     3


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC---ccceeeeeeeeeeec
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG---STELHMIQSWSFQTS  253 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~sw~f~~~  253 (645)
                      ++.+|+.++|||+||+.+++|.|++.+.. ++..|+++..+||+.+||++|||||||+||.   ..|.|+|++|+|+++
T Consensus       154 ~~~~g~~~~~~I~yd~~~~~l~v~l~~~~-~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~h~I~sWsFss~  231 (233)
T d1g8wa_         154 DFVNGENAEVLITYDSSTNLLVASLVYPS-QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASK  231 (233)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEEEE
T ss_pred             cccCCcEEEEEEEEeCCCcEEEEEEEeCC-CCCcEEEEEEechhHcCCCcEEEEEEEEcCCCCCCceeeEEEEEEEEEE
Confidence            67899999999999999999999998766 6788899999999999999999999999994   557899999999985

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=9.1e-52  Score=413.10  Aligned_cols=223  Identities=32%  Similarity=0.544  Sum_probs=193.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      .+++|+|++|+  ..||+|+|||.+ .+|.|+||++...   ...++|||+|++||+||++.+++.+||+|+|+|.|...
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sf~t~f~F~i~~~   81 (251)
T d1g9fa_           2 ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAP   81 (251)
T ss_dssp             EEEEEEESSCCC-CTTEEEEETCBCCTTC-CBCSCBC---CBCTTCEEEEEESSCEECBCC-CCCBCEEEEEEEEEEECS
T ss_pred             ceEEEEeCCCCCCCCCEEEeeeEEECCCCEEEecCCcCCCcccCceEEEEEeCCCEEccCCCCccceeeEEEEEEEEecC
Confidence            56899999998  458999999998 4789999986432   24689999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      +...+||||||+|+|....++..||+||+++.. .+.++.|||||||++|.+  ||+++|||||+|++.|..+..     
T Consensus        82 ~~~~~gDGlAFvl~p~~~~~~~~~g~lG~~~~~-~~~~~~vaVEFDT~~n~~--D~~~~Hvgi~~n~~~s~~~~~-----  153 (251)
T d1g9fa_          82 DTKRLADGLAFFLAPIDTKPQTHAGYLGLFNEN-ESGDQVVAVEFDTFRNSW--DPPNPHIGINVNSIRSIKTTS-----  153 (251)
T ss_dssp             CC--CCEEEEEEEEETTCCCCCCGGGTTTCCTT-SCCCSCEEEEEECC-CTT--SCSSSEEEEEESSSSCSEEEE-----
T ss_pred             CCCCCCCceEEEEecCCCCCCCccCccCccccc-CCCcceEEEEEecccCCC--CCCCCcEeEEecCcccccccc-----
Confidence            888899999999999888778889999998764 345789999999999974  999999999999999987765     


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCcc--ceeeeeeeeeeecC
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGST--ELHMIQSWSFQTSG  254 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~--~~~~i~sw~f~~~~  254 (645)
                      .++.+|+.++|||+||+..++|+|++.+.. +|..|+++..|||+.+|+++||||||||||...  |.|+|++|+|++..
T Consensus       154 ~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~~-~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~h~I~sWsF~s~~  232 (251)
T d1g9fa_         154 WDLANNKVAKVLITYDASTSLLVASLVYPS-QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNL  232 (251)
T ss_dssp             CCCCTTCCEEEEEEEETTTTEEEEEEEEGG-GTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             eEecCCCEEEEEEEEECCccEEEEEEecCC-CCcceeEEEEecchhhCCCcEEEEEEeecCCCCCCceeEEEEeEeECCC
Confidence            368899999999999999999999998765 788899999999999999999999999999755  88999999999874

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=100.00  E-value=2.2e-51  Score=406.04  Aligned_cols=220  Identities=33%  Similarity=0.538  Sum_probs=193.7

Q ss_pred             ceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           24 NMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        24 ~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      ++||+|++|.  .+||+|+|||.+ .+|.|+||+....   ..+++|||+|++||+||++.+++++||+|+|+|.|.+..
T Consensus         2 ~~SF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sFsT~F~f~i~~~~   81 (234)
T d1f9ka_           2 TQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPY   81 (234)
T ss_dssp             EEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCC
T ss_pred             ceEEEeCCCCCCCCCEEEeeeEEEcCCCEEEeecCCCCCCcccceeEEEEeCCCEEeeCCCCCcCcceEEEEEEEEECCC
Confidence            5799999997  578999999998 5789999996432   246899999999999999999999999999999998653


Q ss_pred             -CCCCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 -PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 -~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                       ...+||||||+|+|...+.+..|+++|+++..  +.++.|||||||++|.  +||++||||||+|++.|.++.+     
T Consensus        82 ~~~~g~dG~aF~i~p~~~~~~~~g~~~g~~~~~--~~~~~vaVEFDT~~n~--~Dp~~nHvgi~~ns~~s~~~~~-----  152 (234)
T d1f9ka_          82 AYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPP--EGDNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTLH-----  152 (234)
T ss_dssp             SSSCCCEEEEEEEECTTCCCCCSGGGTTTCCSS--CCSCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE-----
T ss_pred             CCCCccceEEEEECCCCCCcccccccccccCCC--CccceEEEEEeccccC--CCCCCCcEeEecCCcccccccc-----
Confidence             45678999999999888778899999998763  4578899999999997  4999999999999999887765     


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCC--CccEEeEEeccCC---ccceeeeeeeeee
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLK--GNMYVGFSASTEG---STELHMIQSWSFQ  251 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~--~~~~vGfsastg~---~~~~~~i~sw~f~  251 (645)
                      +++.+|+.++|||+||+.+++|+|++++.. ++..|.|++.|||+.+|+  ++|||||||+||.   ..|.|+|++|+|+
T Consensus       153 ~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~-~~~~~~ls~~idL~~~l~~~~~v~vGFSasTG~~~~~~~~h~I~sWsF~  231 (234)
T d1f9ka_         153 FQLENGGVANVVIKYDSPTKILNVVLAFHS-VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFT  231 (234)
T ss_dssp             CCCCTTCCEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEEE
T ss_pred             ccccCCCEEEEEEEEcCCCcEEEEEEEeCC-CCccceEEEEEcHHHhcCCCCEEEEEEEeecCCCCCceeeeEEEEEEeE
Confidence            478899999999999999999999999765 567789999999999997  5699999999994   5689999999998


Q ss_pred             ec
Q 041096          252 TS  253 (645)
Q Consensus       252 ~~  253 (645)
                      ++
T Consensus       232 s~  233 (234)
T d1f9ka_         232 SS  233 (234)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=100.00  E-value=4.1e-50  Score=399.96  Aligned_cols=226  Identities=34%  Similarity=0.556  Sum_probs=198.3

Q ss_pred             CCceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC--CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           22 SNNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV--PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        22 ~~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~--~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      +++++|+|++|.  ..||+|+|||.+. +|.||||++...  ...++|||+|++||+||++.+++++||+|+|+|+|.+.
T Consensus         1 ~~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sFst~F~F~i~~~   80 (239)
T d1dbna_           1 SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAP   80 (239)
T ss_dssp             CCEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             CCceEEEeCCCCCCCCCEEEeeeeEECCCCEEEccCCCCCCcccceeEEEeecCCEEccCCCCccceEEEEEEEEEEECC
Confidence            357999999996  4689999999985 679999986432  35689999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEecCCCC--CCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCC--CCCCCeeeeecCCcccccccC
Q 041096           97 NPSSFGDGLAFFISPDNQI--LGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTAD  171 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~--~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~--d~~~~Hvgi~vns~~s~~~~~  171 (645)
                      ....+||||||+|+|....  .++.|++||+++..+ ++.++.+||||||++|.+++  ||+++|||||+|++.|.++..
T Consensus        81 ~~~~~gdG~AF~l~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~aVEfDT~~n~~~~~~d~~~~hvgid~n~~~s~~~~~  160 (239)
T d1dbna_          81 NPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQ  160 (239)
T ss_dssp             STTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSCCCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCCEEEEEeCCCccCCcccCccccccccccCCCcccCeeeeEEeeeecCCCCCCCCCCceeeEEcCCcccccccc
Confidence            7788999999999998763  467789999998654 34589999999999998764  789999999999999877665


Q ss_pred             CCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc--cceeeeeeee
Q 041096          172 PILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS--TELHMIQSWS  249 (645)
Q Consensus       172 ~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~sw~  249 (645)
                      .     .+.+|+.++|||+|++.+++|.|++.+.. ++..|.++..+||+.+|+++||||||||||..  .|.|+|++|+
T Consensus       161 ~-----~~~~g~~~~~~i~y~~~~~~l~v~l~~~~-~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~H~I~sWs  234 (239)
T d1dbna_         161 W-----DWINGGVAFATITYLAPNKTLIASLVYPS-NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS  234 (239)
T ss_dssp             C-----CCCTTCCEEEEEEEEGGGTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEE
T ss_pred             c-----eEeCCceeEEEEEEcCCCCEEEEEEEecC-CCccEEEEEecchHHhcCCcEEEEEEEeCCCCCCcceeEEEEEE
Confidence            3     46689999999999999999999998765 67788999999999999999999999999965  5789999999


Q ss_pred             eeec
Q 041096          250 FQTS  253 (645)
Q Consensus       250 f~~~  253 (645)
                      |+++
T Consensus       235 Fss~  238 (239)
T d1dbna_         235 FTST  238 (239)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            9975

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=7.2e-50  Score=395.69  Aligned_cols=223  Identities=30%  Similarity=0.528  Sum_probs=191.5

Q ss_pred             CCceeEEeCCCCCC--CeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCC
Q 041096           22 SNNMNFDFTSFNLR--NITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNP   98 (645)
Q Consensus        22 ~~~~~f~~~~f~~~--~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   98 (645)
                      +.+++|+|++|+..  +|+|+|||.+. +|.|+||++.  ..+++|||+|++||+||++.+++.+||+|+|+|.|.+.+.
T Consensus         1 a~~~sF~~~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~--~~~~~G~a~y~~Pi~l~~~~~~~~~sf~t~f~f~i~~~~~   78 (232)
T d1v6ia_           1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLN--KVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKD   78 (232)
T ss_dssp             CEEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTT--STTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSS
T ss_pred             CccEEEECCCCCCCCCCEEEeeeeEEcCCCEEEeCCCC--CCCceEEEEcCCCEEccCCCCCccceeEEEEEEEeccCCC
Confidence            35789999999965  59999999974 7899999863  3478999999999999999999999999999999998888


Q ss_pred             CCCCCceEEEEecCCCCCCCCCCccccccC-CCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCcccc
Q 041096           99 SSFGDGLAFFISPDNQILGSAGGCLGLVNS-SQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGI  177 (645)
Q Consensus        99 ~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~-~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~  177 (645)
                      ..+||||||+|+|.....+..|+.+|+... ..++.++.|||||||++|.+++||+++|||||+|++.+.+...     .
T Consensus        79 ~~~gDG~AF~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~aVEfDT~~n~~~~d~~~~Higid~n~~~s~~~~~-----~  153 (232)
T d1v6ia_          79 YDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-----W  153 (232)
T ss_dssp             SBCCCEEEEEEEETTCCCCTTCCCGGGTTTSCTTSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEE-----C
T ss_pred             CCCCCeEEEEEECCCCCCCCCccCCcccccccCCCCCceEEEEEEeEecCCCCCCCCccEeEeeCCcccccccc-----c
Confidence            889999999999988754333332233222 1234578999999999999988999999999999998877654     3


Q ss_pred             ccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc-cceeeeeeeeeeec
Q 041096          178 DLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS-TELHMIQSWSFQTS  253 (645)
Q Consensus       178 ~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~-~~~~~i~sw~f~~~  253 (645)
                      ++.+|+.++|||+||+.+++|.|++++.  ++..|.++..|||+.+|+++|||||||+||.. .|.|+|++|+|+++
T Consensus       154 ~~~~g~~~~v~I~Yd~~~~~L~V~~~~~--~~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~sWsFss~  228 (232)
T d1v6ia_         154 NSVSGAVVKVTVIYDSSTKTLSVAVTND--NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST  228 (232)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEECT--TSCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEEEEEEEEE
T ss_pred             ccCCCCEEEEEEEEeCCceEEEEEEecC--CCCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEEEeEeEEe
Confidence            6789999999999999999999999864  46678899999999999999999999999975 59999999999986

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=100.00  E-value=7.8e-50  Score=397.58  Aligned_cols=224  Identities=31%  Similarity=0.557  Sum_probs=198.9

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC--CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV--PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~--~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .++||+|++|.  ..|++|+|||.+. +|.||||++...  ..+++|||+|++||+||++.+++++||+|+|+|+|.+.+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~F~i~~~~   81 (237)
T d1fnya_           2 GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             ceEEEEeCCCCCCCCCeEEcccEEEcCCCEEECCCCCCCCcccccEEEEEeCCCeEcccCCCCcceeeEEEEEEEEecCC
Confidence            46899999997  4689999999985 689999986321  357899999999999999999999999999999999888


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      ...+||||||+|+|.+...+..||+||+++..+ .+.++.+||||||+.|.++ ||+++||||++|++.|..+.+     
T Consensus        82 ~~~~gDG~AF~l~~~~~~~~~~gg~lg~~~~~~~~~~~~~~aVefDT~~n~~~-d~~~~Higi~~n~~~s~~~~~-----  155 (237)
T d1fnya_          82 PATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVP-----  155 (237)
T ss_dssp             TTSCCEEEEEEEEETTCCCCCCGGGTTTCC---CCTTSCCEEEEEECSCCTTT-CCSSSEEEEEESSSSCSEEEE-----
T ss_pred             CCCCCCeeEEEEcCCCCCcccccCcccccCCCCccCccceEEEEeccccccCC-CCCCceEEEecCCCccccccc-----
Confidence            788999999999998887788899999987643 4568899999999999886 999999999999999887665     


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccC---Cccceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE---GSTELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~sw~f~~~  253 (645)
                      .++.+|+.++|||+||+..++|.|++.+.. ++..|+++..+||+.+||++|||||||+||   ...|.|+|+||+|+++
T Consensus       156 ~~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~-~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~s~~~e~H~I~sWsF~s~  234 (237)
T d1fnya_         156 WNWTNGEVANVFISYEASTKSLTASLVYPS-LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             CCCCTTCCEEEEEEEEGGGTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             ccccCCcEEEEEEEEeCCccEEEEEEEeCC-CCcceeEEEEechhhcCCCcEEEEEEEECCCCCCcccccEEEEeEeEEe
Confidence            357789999999999999999999999866 677899999999999999999999999999   4668999999999986

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=100.00  E-value=2e-49  Score=392.70  Aligned_cols=221  Identities=34%  Similarity=0.535  Sum_probs=195.6

Q ss_pred             CceeEEeCCCC--CCCeEEecceEee-CCcEEccCCCCC--CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLR-NGVIGLTRELGV--PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~-~~~~~Lt~~~~~--~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|+  ..||+|+|||.+. +|.|+||++...  .++++|||||++||+||+..  ..+||+|+|+|.|.+..
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pv~l~~~~--~~~sF~t~f~f~i~~~~   79 (233)
T d1n47a_           2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT--TLASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSS--CBCEEEEEEEEECCCSS
T ss_pred             CceEEEeCCCCCCCCCeEEecceEECCCCEEEecCCCCCCcCCCceEEEEeCCCEEccCCC--eeeeEEEEEEEEEeCCC
Confidence            46899999996  5799999999985 679999986432  34689999999999999863  57999999999999888


Q ss_pred             CCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccc
Q 041096           98 PSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQG  176 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~  176 (645)
                      ...+||||||+|+|....++..|++||+++..+ ++.++.|||||||++|.+  ||++||||||+|++.|.++.++    
T Consensus        80 ~~~~gDGlAF~l~~~~~~~~~~gg~lGl~~~~~~~~~~~~~aVefDT~~n~~--d~~~~higi~~n~~~s~~~~~~----  153 (233)
T d1n47a_          80 AAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQTVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKTTPF----  153 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCCCCCGGGTTTCSSSSCCGGGCCEEEEEECSCCTT--SCSSCEEEEEESSSSCSEEEEC----
T ss_pred             CCCCCCceEEEECCCCCCCCCCCCccccccccCCCCcCceEEEEEEeeecCC--CCCCCceeEccCCccccccccc----
Confidence            788999999999998887788899999997654 445889999999999973  9999999999999998877664    


Q ss_pred             cccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccC---Cccceeeeeeeeeeec
Q 041096          177 IDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE---GSTELHMIQSWSFQTS  253 (645)
Q Consensus       177 ~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~sw~f~~~  253 (645)
                       ++.+|+.++|||+||+.+++|.|++.+.. ++..|.++..+||+.+|+++|||||||+||   ...|.|+|++|+|+++
T Consensus       154 -~l~~g~~~~v~I~Y~~~~~~l~v~l~~~~-~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~I~sWsFss~  231 (233)
T d1n47a_         154 -DMVYGEKANIVITYQASTKALAASLVFPV-SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             -CCCTTSCEEEEEEEETTTTEEEEEEEETT-TTEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             -eecCCCEEEEEEEEcCCCeEEEEEEEeCC-CCccEEEEEEechHHhcCCcEEEEEEEecCCCCCcccccEEEEEEeEEE
Confidence             67889999999999999999999999765 688899999999999999999999999999   4578999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.2e-50  Score=413.47  Aligned_cols=254  Identities=27%  Similarity=0.478  Sum_probs=207.8

Q ss_pred             cCHHHHHHHhcCC---------CcCceeccCCceEEEEEEECCCC---eEEEEEeccC--CcchhHhHHHHHHHHhhcCC
Q 041096          338 FSYRELRSATRGF---------HSNRILGRGAFGNVYKAYFASSG---SVAAVKRSKH--SHEGKTEFLAELSIIACLRH  403 (645)
Q Consensus       338 ~~~~~l~~~~~~f---------~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H  403 (645)
                      ++|+++..++++|         +..++||+|+||+||+|.+..++   ..||||++..  .....++|.+|+++|++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            4666777776554         44578999999999999987554   3689998765  34456789999999999999


Q ss_pred             CCeeeeeeeeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 041096          404 KNLVQLLGWCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIM  483 (645)
Q Consensus       404 ~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIl  483 (645)
                      ||||+++|+|.+.+..++|||||++|+|.+++.....   .++|.+++.++.|||+||+|||+   ++|+||||||+|||
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~---~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NIL  160 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNIL  160 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccC---CCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEE
Confidence            9999999999999999999999999999999876443   39999999999999999999999   99999999999999


Q ss_pred             EcCCCCeeeecccc-----------------ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccc
Q 041096          484 LDANFNARLESSFT-----------------LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEG  545 (645)
Q Consensus       484 ld~~~~~kl~d~~~-----------------~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~  545 (645)
                      |+.++.+||+|..-                 ...||+.|||||.+.++.++.++|||||||+||||+| |+.||......
T Consensus       161 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~  240 (299)
T d1jpaa_         161 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ  240 (299)
T ss_dssp             ECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             ECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH
Confidence            99999999988321                 1246889999999999999999999999999999998 89999764321


Q ss_pred             cchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       546 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                          .+.             ..+....+...+.+++..+.+++..||+.||++||||+||++.|+.+.+
T Consensus       241 ----~~~-------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         241 ----DVI-------------NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             ----HHH-------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ----HHH-------------HHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence                121             1222222334455567788999999999999999999999999987644

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=402.60  Aligned_cols=243  Identities=23%  Similarity=0.375  Sum_probs=202.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||+||+|.+.+ +..||||++.......++|.+|++++++++|||||+++|+|.+.+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            467788999999999999999874 6789999998877777899999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +|+|.+++.....   .++|..++.++.|||+||+|||+   ++|+||||||+|||||.++.+||+|..           
T Consensus        84 ~g~L~~~l~~~~~---~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  157 (263)
T d1sm2a_          84 HGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  157 (263)
T ss_dssp             TCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             CCcHHHHhhcccc---CCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence            9999999876543   38999999999999999999999   999999999999999999999998822           


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....||+.|+|||++.+..++.++|||||||++|||+|++.|+......   ..+..             .+....+.
T Consensus       158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~---~~~~~-------------~i~~~~~~  221 (263)
T d1sm2a_         158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVVE-------------DISTGFRL  221 (263)
T ss_dssp             -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH---HHHHH-------------HHHHTCCC
T ss_pred             eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH---HHHHH-------------HHHhcCCC
Confidence              1245889999999999999999999999999999999965544332211   11111             12222222


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      ..+..+...+.+++..||+.||++||||+||++.|+++.
T Consensus       222 ~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         222 YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            334445677889999999999999999999999998654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-49  Score=408.47  Aligned_cols=249  Identities=25%  Similarity=0.356  Sum_probs=212.5

Q ss_pred             HhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          346 ATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       346 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ..++|+..+.||+|+||+||+|++..++..||||+++......++|.+|+++|++++|||||+++|+|.+++..+|||||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            34678889999999999999999998899999999988777778899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc---------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF---------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~---------  496 (645)
                      |++|+|.+++.....  ..++|..++.++.|||+||+|||+   ++|+||||||+||||+.++.+||+|..         
T Consensus        95 ~~~g~l~~~l~~~~~--~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          95 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             CTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             ccCcchHHHhhhccc--cchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            999999999976432  348999999999999999999999   999999999999999999999998822         


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....|++.|+|||++.++.++.++|||||||++|||++|+.|+.......   .             +.+.+....
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~---~-------------~~~~i~~~~  233 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---Q-------------VYELLEKDY  233 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---H-------------HHHHHHTTC
T ss_pred             ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH---H-------------HHHHHhcCC
Confidence                11247889999999999999999999999999999999877765432211   1             122233333


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      +...+...+..+.+++..||+.||++||||++|++.|+...+.
T Consensus       234 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            3445555677889999999999999999999999999876543

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=100.00  E-value=1.3e-47  Score=382.53  Aligned_cols=223  Identities=31%  Similarity=0.590  Sum_probs=194.5

Q ss_pred             CceeEEeCCCC--CCCeEEecceEeeCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCC
Q 041096           23 NNMNFDFTSFN--LRNITLLGDSYLRNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVN   97 (645)
Q Consensus        23 ~~~~f~~~~f~--~~~~~l~G~a~~~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   97 (645)
                      .+++|+|++|.  ..||+|+|||.+.++.|+||++...   ...++|||+|++||+||++.+++++||+|+|+|+|....
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~~~~i~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~   81 (241)
T d1ukga_           2 DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSFSLKSPL   81 (241)
T ss_dssp             CEEEEEESSCCSCCSSEEEEETCEEETTEEECSCBCTTSCBCSSEEEEEEESSCEECEETTTTEEEEEEEEEEEEEECSS
T ss_pred             ccEEEEeCCCCCCCCCEEEeeeEEEeCCEEEeCCCCCCCCccccceEEEEeCCCeecccCCCCceeeeEEEEEEEEecCC
Confidence            46899999996  4689999999999999999986432   357999999999999999999999999999999998765


Q ss_pred             CCCCCCceEEEEecCCCC--CCCCCCccccccCCC---CCCCcEEEEEeeCCCCCCCC--CCCCCeeeeecCCccccccc
Q 041096           98 PSSFGDGLAFFISPDNQI--LGSAGGCLGLVNSSQ---LTKNKFVAIEFDTRLDPHFD--DPDENHIGLDIDSLESIKTA  170 (645)
Q Consensus        98 ~~~~g~G~aF~l~p~~~~--~~~~g~~lGl~~~~~---~~~~~~vAVEFDt~~n~~~~--d~~~~Hvgi~vns~~s~~~~  170 (645)
                       ..+|||||||++|....  .+..|+++|+++...   .+.++.+||||||++|.+.+  ||+++|||||+|++.|.++.
T Consensus        82 -~~~~~g~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~n~~vaVEfDt~~n~~~~~~~~~~~Higid~n~~~s~~~~  160 (241)
T d1ukga_          82 -SNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTV  160 (241)
T ss_dssp             -SSCCCEEEEEEECTTCCCCTTCCGGGTTTSCGGGTTCGGGCCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             -CCCCCceEEEEeCCCCCcccccCcccccccccccccCCccCcccceeccCEecCccCCCCCCCccEeeecCCccccccc
Confidence             56799999999986653  356778888876543   33488999999999987654  58999999999999988765


Q ss_pred             CCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeee
Q 041096          171 DPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSF  250 (645)
Q Consensus       171 ~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f  250 (645)
                      .     .++.+|..++|||+||+..++|+|++++.  ++..|.++..|||+.+|+++||||||||||...|.|+|++|+|
T Consensus       161 ~-----~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF  233 (241)
T d1ukga_         161 K-----WDRRDGQSLNVLVTFNPSTRNLDVVATYS--DGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF  233 (241)
T ss_dssp             E-----CCCCTTCCEEEEEEEETTTTEEEEEEEET--TCCEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEE
T ss_pred             c-----cccCCCcEEEEEEEEeCCCcEEEEEEccC--CCCceEEEEEEehHHhCCCcEEEEEEEecCCCCceeEEEEeEE
Confidence            5     36789999999999999999999999875  4677889999999999999999999999999999999999999


Q ss_pred             eec
Q 041096          251 QTS  253 (645)
Q Consensus       251 ~~~  253 (645)
                      +++
T Consensus       234 ss~  236 (241)
T d1ukga_         234 TST  236 (241)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-48  Score=389.67  Aligned_cols=241  Identities=24%  Similarity=0.385  Sum_probs=207.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..++||+|+||+||+|+++ ++..||||.++......++|.+|++++++++||||++++|+|.+.+.+++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            57889999999999999999986 57889999998877777899999999999999999999999999999999999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +|+|..++.....   .+++..+.+++.|+|+||+|||+   .+|+||||||+||||+.++.+||+|..           
T Consensus        83 ~g~l~~~~~~~~~---~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~  156 (258)
T d1k2pa_          83 NGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  156 (258)
T ss_dssp             TEEHHHHHHSGGG---CCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred             CCcHHHhhhcccc---CCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence            9999999876544   38999999999999999999999   999999999999999999999998822           


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+    +.             ..+....+
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~----~~-------------~~i~~~~~  219 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TA-------------EHIAQGLR  219 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH----HH-------------HHHHTTCC
T ss_pred             eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH----HH-------------HHHHhCCC
Confidence              12457889999999999999999999999999999998 899997654321    11             11112222


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ...+...+..+.+++..||+.||++|||++++++.|.++
T Consensus       220 ~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         220 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            334445567889999999999999999999999998653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-48  Score=397.51  Aligned_cols=246  Identities=22%  Similarity=0.378  Sum_probs=198.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      .++|+..++||+|+||+||+|+++   ..||||+++.   .....+.|.+|++++++++|||||+++|++.+ ++.+|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~   82 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT   82 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence            357888999999999999999875   3589999865   34456789999999999999999999999865 4689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      |||++|+|.+++.....   .++|.+++.++.|||+||+|||+   ++|+||||||+||||+.++.+||+|..       
T Consensus        83 Ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          83 QWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             ECCCEEEHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             ecCCCCCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            99999999999975443   39999999999999999999999   999999999999999999999998822       


Q ss_pred             -------cccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 -------TLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                             ....||+.|||||++.+   ..++.++|||||||+||||+||+.||........   +...+......     
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~---~~~~~~~~~~~-----  228 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGYLS-----  228 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHHTSCC-----
T ss_pred             cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH---HHHHHhcCCCC-----
Confidence                   22468999999999864   3589999999999999999999999976533211   11111111110     


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                         +.+ ...+.++++.+.+++..||+.||++||||+||++.|+.+..
T Consensus       229 ---p~~-~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         229 ---PDL-SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             ---CCG-GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---Ccc-hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               111 12233456678899999999999999999999999986543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-48  Score=397.30  Aligned_cols=246  Identities=24%  Similarity=0.431  Sum_probs=204.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC----eEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG----SVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~----~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      ..|+..++||+|+||.||+|.++.++    ..||||++...  .....+|.+|++++++++|||||+++|+|.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            45778899999999999999987544    47999998653  3345679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ||||+.+++|.+++.....   .++|.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|..     
T Consensus        87 v~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEecccCcchhhhhcccc---cccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcc
Confidence            9999999999998876543   39999999999999999999999   999999999999999999999998822     


Q ss_pred             ----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                                ....||+.|||||++.++.++.++|||||||++|||++|..|+......   ..             +.+
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~---~~-------------~~~  224 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HE-------------VMK  224 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HH-------------HHH
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH---HH-------------HHH
Confidence                      1135788999999999999999999999999999999976665432211   11             222


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                      .+....+...+.+++..+.+++.+||+.||++||||.||++.|+.+.+.
T Consensus       225 ~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            3334444455666778899999999999999999999999999876544

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-48  Score=395.51  Aligned_cols=242  Identities=24%  Similarity=0.411  Sum_probs=201.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|+..+.||+|+||+||+|.++ ++..||||+++......+.|.+|++++++++|||||+++|+|.+ +..+|||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            356888899999999999999986 47889999998877777889999999999999999999998865 5679999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++|+|.+++.....  ..++|.++++|+.|||+||+|||+   ++|+||||||+||||+.++.+||+|..          
T Consensus        90 ~~g~L~~~~~~~~~--~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          90 ENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             TTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             CCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence            99999998865432  248999999999999999999999   999999999999999999999998721          


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||+.|+|||++.++.++.++|||||||++|||+||..|+......   ..+..             .+....+
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~---~~~~~-------------~i~~~~~  228 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN---PEVIQ-------------NLERGYR  228 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHH-------------HHHTTCC
T ss_pred             ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH---HHHHH-------------HHHhcCC
Confidence               2246889999999999999999999999999999999976665432211   11111             1222222


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      ...+...+..+.+++..||+.||++||||++|++.|+.
T Consensus       229 ~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            33344556678899999999999999999999998874

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-48  Score=394.48  Aligned_cols=240  Identities=22%  Similarity=0.361  Sum_probs=198.7

Q ss_pred             cCCCcCce-eccCCceEEEEEEECC--CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRI-LGRGAFGNVYKAYFAS--SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~-lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...+. ||+|+||+||+|.++.  ++..||||+++..  ....++|.+|+++|++++|||||+++|+|.. +..|||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            34555664 9999999999998753  4568999998763  3446789999999999999999999999865 568999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      ||||++|+|.+++.....   .+++.+++.++.|||+||+|||+   ++|+||||||+||||+.++.+||.|..      
T Consensus        87 mE~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             EECCTTEEHHHHHTTCTT---TSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEeCCCCcHHHHhhcccc---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccc
Confidence            999999999999865443   39999999999999999999999   999999999999999999999998821      


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....||+.|+|||++.++.++.++|||||||++|||+| |+.||......    .+.             .
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~----~~~-------------~  223 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVM-------------A  223 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHH-------------H
T ss_pred             ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH----HHH-------------H
Confidence                     12357899999999999999999999999999999998 99999765321    111             1


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      .+....+...+...+..+.+++..||+.||++||||.+|++.|+.
T Consensus       224 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         224 FIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            122222234455666788999999999999999999999998874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=393.57  Aligned_cols=243  Identities=22%  Similarity=0.334  Sum_probs=191.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--CCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--KGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV  422 (645)
                      ++|+..+.||+|+||+||+|....+|+.||||.+...   ....+.+.+|++++++++|||||++++++.+  .+.+|||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5788999999999999999999999999999998663   3345678999999999999999999999865  4568999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC--EQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ||||++|+|.+++.+.......+++..++.++.|++.||+|||+..  ..+|+||||||+||||+.++.+||+|.     
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999999765444456999999999999999999999831  234999999999999999999999871     


Q ss_pred             -------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          496 -------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       496 -------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ....+||+.|||||++.+..++.++|||||||++|||++|+.||...+..    .+...+            .
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~----~~~~~i------------~  227 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAGKI------------R  227 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHH------------H
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH----HHHHHH------------H
Confidence                   22357999999999999999999999999999999999999999764321    111111            0


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ... ....+......+.+++.+||+.||++|||++|+++
T Consensus       228 ~~~-~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         228 EGK-FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCC-CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            111 11223334556888999999999999999999975

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=5.9e-48  Score=381.16  Aligned_cols=220  Identities=29%  Similarity=0.427  Sum_probs=198.5

Q ss_pred             CCceeEEeCCCCCCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCC
Q 041096           22 SNNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSS  100 (645)
Q Consensus        22 ~~~~~f~~~~f~~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  100 (645)
                      +++++|+|++|+..||+|+|||.+. +|.||||+..+...+++|||+|++||+||++.+++++||+|+|+|+|.+.+...
T Consensus         1 ~~~~sf~f~~F~~~nl~l~GdA~v~~~g~i~LT~~~~~~~~~~G~~~y~~Pv~l~~~~~~~~~sF~t~f~f~i~~~~~~~   80 (226)
T d1avba_           1 SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIEN   80 (226)
T ss_dssp             CEEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTS
T ss_pred             CCceEEECCCCCccceeEecceEECCCCeEEccCCCCCCccceEEEEeCCCeEcccCCCCcccceEEEEEEEEecCCCCC
Confidence            3578999999999999999999985 579999987655678999999999999999999999999999999999988888


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccC
Q 041096          101 FGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLK  180 (645)
Q Consensus       101 ~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~  180 (645)
                      +||||||+|+|.....+..||++|+++.        ++|||||+.|....|+..|||||++|+..+..+.+.   ...+.
T Consensus        81 ~gDG~aF~i~~~~~~~g~~gg~~gl~~~--------~~v~fdt~~~~~~~d~~~nhi~i~~n~~~s~~~~~~---~~~~~  149 (226)
T d1avba_          81 SAYGLAFALVPVGSRPKLKGRYLGLFNT--------TNYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESC---NFGHN  149 (226)
T ss_dssp             CCEEEEEEEEETTCCCCCCGGGTTTCSC--------SSCCGGGCCEEEEEETTTTEEEEEESSSSCSEEEEC---CSGGG
T ss_pred             CCceEEEEEccCCCCCCCccccCCcccc--------ccccccceeccccccCCCCEEEEeCCCCcccccccc---ccccC
Confidence            9999999999998878888999999754        479999999876669999999999999998777664   35678


Q ss_pred             CCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCC---ccceeeeeeeeeeec
Q 041096          181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEG---STELHMIQSWSFQTS  253 (645)
Q Consensus       181 ~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~sw~f~~~  253 (645)
                      +|+.++|||+||+.+++|+|++++.. ++..|.++..+||+.+||++|||||||+||.   ..|.|+|+||+|+++
T Consensus       150 ~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~~~~vdL~~~l~~~~y~GFSAaTG~~s~~~~~H~IlsWsF~s~  224 (226)
T d1avba_         150 NGEKAEVRITYDSPKNDLRVSLLYPS-SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             TTCEEEEEEEEEGGGTEEEEEEEETT-TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEEEE
T ss_pred             CCeEEEEEEEEcCCCcEEEEEEEeCC-CCccEEEEEEecHHHccCCcEEEEEEEEcCCCCCCeeeeEEEEEEeEEe
Confidence            99999999999999999999999876 6888899999999999999999999999995   467899999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=388.10  Aligned_cols=235  Identities=29%  Similarity=0.428  Sum_probs=200.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||+|+.+.+++.||+|++...    ....+.+.+|++++++++|||||++++++.+++..||||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4688899999999999999999999999999988642    234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      |||++|+|.+++.....    +++.++..++.||++||+|||+   ++|+||||||+||||+.++..|+.|.        
T Consensus        86 Ey~~~g~L~~~l~~~~~----l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             ECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred             eecCCCcHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCC
Confidence            99999999999986543    8999999999999999999999   99999999999999999999999872        


Q ss_pred             --ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          496 --FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       496 --~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        .....||+.|||||++.+..++.++|||||||+||||++|+.||...+..    .+...+            ...  .
T Consensus       159 ~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i------------~~~--~  220 (263)
T d2j4za1         159 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ----ETYKRI------------SRV--E  220 (263)
T ss_dssp             CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHH------------HTT--C
T ss_pred             CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH----HHHHHH------------HcC--C
Confidence              23347999999999999999999999999999999999999999764321    111111            011  1


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..++....+.+.+++..||+.||++|||++|+++
T Consensus       221 ~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         221 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            1233334566788899999999999999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-47  Score=390.79  Aligned_cols=233  Identities=26%  Similarity=0.391  Sum_probs=193.1

Q ss_pred             ceeccCCceEEEEEEECC--CCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCCC
Q 041096          354 RILGRGAFGNVYKAYFAS--SGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMPN  428 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~--~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  428 (645)
                      ++||+|+||+||+|.+..  .++.||||+++..   ....++|.+|+++|++++|||||+++|+|.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999998754  4578999998652   2335679999999999999999999999965 467899999999


Q ss_pred             CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------------
Q 041096          429 GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------------  496 (645)
Q Consensus       429 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------------  496 (645)
                      |+|.+++.....    ++|.+++.++.|||+||+|||+   ++|+||||||+||||+.++.+|+.|..            
T Consensus        92 g~L~~~l~~~~~----l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~  164 (277)
T d1xbba_          92 GPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  164 (277)
T ss_dssp             EEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             CcHHHHHhhccC----CCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence            999999986543    9999999999999999999999   999999999999999999999998721            


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                         ....||+.|+|||.+.++.++.++|||||||++|||++ |+.||......    .+.             +.+....
T Consensus       165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~----~~~-------------~~i~~~~  227 (277)
T d1xbba_         165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVT-------------AMLEKGE  227 (277)
T ss_dssp             EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHH-------------HHHHTTC
T ss_pred             ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH----HHH-------------HHHHcCC
Confidence               12358899999999999999999999999999999998 89999764321    111             1222222


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                      +...+..++..+.+++.+||+.||++||||++|++.|+.
T Consensus       228 ~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         228 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            334455566788899999999999999999999988864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=389.36  Aligned_cols=238  Identities=25%  Similarity=0.330  Sum_probs=194.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      ++|+..++||+|+||+||+|+...+++.||||++...  ....+.+.+|++++++++|||||++++++.+++..||||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5688899999999999999999999999999998653  33456799999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc----------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS----------  495 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~----------  495 (645)
                      +++|+|.+++....    .+++.++..++.|+++||+|||+   ++|+||||||+||||+.++.+||.|.          
T Consensus        85 ~~gg~L~~~l~~~~----~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          85 CSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             CTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             cCCCcHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            99999999996543    39999999999999999999999   99999999999999999999999882          


Q ss_pred             ----ccccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 ----FTLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 ----~~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                          ....+||+.|||||++.+..+ +.++|||||||++|||++|+.||.........  +....             ..
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~--~~~~~-------------~~  222 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDWK-------------EK  222 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH--HHHHH-------------TT
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHH--HHHHh-------------cC
Confidence                123479999999999988776 67899999999999999999999764432211  11110             00


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .............+.+++..||+.||++|||++|+++
T Consensus       223 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         223 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0000111122355678889999999999999999865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-47  Score=387.77  Aligned_cols=237  Identities=24%  Similarity=0.326  Sum_probs=199.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||+||+|....+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+..|||||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4699999999999999999999999999999998653 334567999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----------  495 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----------  495 (645)
                      ++|+|.+++.+..     +++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+|+.|.           
T Consensus       100 ~gg~L~~~~~~~~-----l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~  171 (293)
T d1yhwa1         100 AGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (293)
T ss_dssp             TTCBHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCcHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeeccccc
Confidence            9999999886532     8999999999999999999999   99999999999999999999999872           


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                       ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......    .....   ...        .....
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~~---~~~--------~~~~~  236 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLI---ATN--------GTPEL  236 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHH---HHH--------CSCCC
T ss_pred             cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH----HHHHH---HhC--------CCCCC
Confidence             223469999999999999999999999999999999999999997643211    11100   000        00011


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..+......+.+++..||+.||.+|||++|+++
T Consensus       237 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            222334566788999999999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-47  Score=387.74  Aligned_cols=239  Identities=25%  Similarity=0.319  Sum_probs=199.6

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      +.|+..+.||+|+||+||+|....++..||||++.. .....+.+.+|+++|++++|||||++++++.+.+..+||||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            457888999999999999999999999999999876 4455678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++|+|.+++.+...   .+++.++..++.||++||+|||+   ++|+||||||+||||+.++.+||.|..          
T Consensus        92 ~~g~L~~~~~~~~~---~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1          92 AGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             TTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred             CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence            99999999876443   39999999999999999999999   999999999999999999999998832          


Q ss_pred             --cccccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 --TLTAGTMGYLAPEYLQ-----YGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~-----~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                        ....||+.|+|||++.     ...|+.++|||||||++|||++|+.||......+....+.    .   . .     .
T Consensus       166 ~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~----~---~-~-----~  232 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA----K---S-E-----P  232 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH----H---S-C-----C
T ss_pred             cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH----c---C-C-----C
Confidence              2357999999999984     4568999999999999999999999997654322111110    0   0 0     0


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      +.  ...+......+.+++..||+.||++|||++|+++
T Consensus       233 ~~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         233 PT--LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             CC--CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC--CCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00  1122334567788999999999999999999976

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=100.00  E-value=5.6e-47  Score=374.46  Aligned_cols=217  Identities=27%  Similarity=0.410  Sum_probs=187.8

Q ss_pred             CCceeEEeCCCCC-CCeEEecceEee-CCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeC
Q 041096           22 SNNMNFDFTSFNL-RNITLLGDSYLR-NGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNV   96 (645)
Q Consensus        22 ~~~~~f~~~~f~~-~~~~l~G~a~~~-~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   96 (645)
                      +++++|+|++|+. ++|+|+|||.+. +|.|+||++...   ...++|||+|++||+||+  +++++||+|+|+|.|.+.
T Consensus         1 a~~~sF~f~~F~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~~s~G~a~y~~Pv~l~~--~~~~~sFst~F~f~i~~~   78 (228)
T d1ioaa_           1 ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD--SNNVASFNTNFTFIIRAK   78 (228)
T ss_dssp             CCCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBC--SSCBEEEEEEEEEECCBS
T ss_pred             CccceEEcCCCCCCCcEEEeeeeEEcCCCEEEecCCCCCCccccceeEEEEECCceEecC--CCceeeEEEEEEEEEecC
Confidence            3578999999985 469999999984 789999986432   236899999999999998  478999999999999998


Q ss_pred             CCCCCCCceEEEEecCCCCCCCCCCccccccCCC-CCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCcc
Q 041096           97 NPSSFGDGLAFFISPDNQILGSAGGCLGLVNSSQ-LTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQ  175 (645)
Q Consensus        97 ~~~~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~-~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~  175 (645)
                      +...+||||||+|+|.+..++..|++||+++... ++.++.|||||||+.|..  |++.+|+++++++..+         
T Consensus        79 ~~~~~gDGlAF~l~~~~~~~~~~g~~lgl~~~~~~~~~~~~vave~dt~~n~~--~~~~~~~~~~~~~~~~---------  147 (228)
T d1ioaa_          79 NQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNARTVAVVFNTFKNRI--DFDKNFIKPYVNENCD---------  147 (228)
T ss_dssp             CTTSCCEEEEEEEEETTCCCCCCGGGTTTCCCSSCCGGGCCEEEEEETTTTEE--EEEESSSSCSEEEECC---------
T ss_pred             CCCCCCCEEEEEEeCCCCCCCCCccccccccccCCCCcceeEEEEecCccccc--cCCCCccceecccccc---------
Confidence            8788999999999999888888999999987653 334788999999998853  7888888888875432         


Q ss_pred             ccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccC---Cccceeeeeeeeeee
Q 041096          176 GIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTE---GSTELHMIQSWSFQT  252 (645)
Q Consensus       176 ~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~sw~f~~  252 (645)
                       .++.+|+.++|||+||+.+++|+|++++.. ++..|.++..+||+.+|+++|||||||+||   ...|.|+|++|+|++
T Consensus       148 -~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~-~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~h~I~sWsFss  225 (228)
T d1ioaa_         148 -FHKYNGEKTDVQITYDSSNNDLRVFLHFTV-SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSS  225 (228)
T ss_dssp             -HHHHCSSCEEEEEEEETTTTEEEEEEEETT-TCCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEEE
T ss_pred             -cccccCcEEEEEEEEcCCCCEEEEEEEeCC-CCceeeEEEEEchHHcCCCcEEEEEEeecCCCCCCceEEEEEEEEeEE
Confidence             356789999999999999999999999764 788899999999999999999999999999   556899999999997


Q ss_pred             c
Q 041096          253 S  253 (645)
Q Consensus       253 ~  253 (645)
                      +
T Consensus       226 ~  226 (228)
T d1ioaa_         226 K  226 (228)
T ss_dssp             E
T ss_pred             e
Confidence            5

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-47  Score=396.62  Aligned_cols=244  Identities=25%  Similarity=0.382  Sum_probs=201.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC-----eEEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG-----SVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGEL  419 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-----~~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~  419 (645)
                      ++|+..++||+|+||+||+|++...+     ..||+|.+..  .......+.+|+.++.++ +|||||+++|+|.+.+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            57888999999999999999986433     3689998865  334456799999999998 899999999999999999


Q ss_pred             EEEEecCCCCCHhHHhhhcCCC-------------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCC
Q 041096          420 LLVYEYMPNGSLDRMLYQDSEN-------------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKAS  480 (645)
Q Consensus       420 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~  480 (645)
                      +||||||++|+|.++|......                   ...++|..++.++.||++||+|||+   ++|+||||||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlKp~  193 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAAR  193 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGG
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCchh
Confidence            9999999999999999765321                   2358999999999999999999999   99999999999


Q ss_pred             cEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccc
Q 041096          481 NIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEG  545 (645)
Q Consensus       481 NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~  545 (645)
                      |||++.++.+||+|..              ....||+.|||||++.++.++.++|||||||+||||+| |+.||......
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999998832              12357899999999999999999999999999999998 89999764432


Q ss_pred             cchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHc
Q 041096          546 HKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILN  610 (645)
Q Consensus       546 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~  610 (645)
                      ..   +             .+++....+...+...+..+.+++..||+.||++||||+||+++|.
T Consensus       274 ~~---~-------------~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         274 AN---F-------------YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HH---H-------------HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH---H-------------HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            21   1             1222223333445556678899999999999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-47  Score=386.82  Aligned_cols=246  Identities=24%  Similarity=0.368  Sum_probs=204.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYMP  427 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  427 (645)
                      ++|+..+.||+|+||+||+|++++ +..||||++.......+.|.+|+.++++++|||||+++|+|.+ ++.++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECC-CCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence            568889999999999999999976 4679999998877777889999999999999999999999965 56899999999


Q ss_pred             CCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----------
Q 041096          428 NGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----------  496 (645)
Q Consensus       428 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----------  496 (645)
                      +|+|..++.....  ..++|.+++.++.||+.||+|||+   ++|+||||||+|||||.++.+||+|..           
T Consensus        95 ~g~l~~~~~~~~~--~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~  169 (285)
T d1fmka3          95 KGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  169 (285)
T ss_dssp             TCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             CCchhhhhhhccc--ccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence            9999999876432  239999999999999999999999   999999999999999999999998832           


Q ss_pred             --cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          497 --TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                        ....||+.|+|||++..+.++.++|||||||++|||++|+.|+......   ..+..             .+....+.
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~---~~~~~-------------~i~~~~~~  233 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLD-------------QVERGYRM  233 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHH-------------HHHTTCCC
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH---HHHHH-------------HHHhcCCC
Confidence              1245889999999999999999999999999999999977776543221   11222             12222233


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCCC
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEPL  616 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~~  616 (645)
                      ..+....+.+.+++.+||+.||++||+|++|+++|+......
T Consensus       234 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            445556678899999999999999999999999998765443

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=391.76  Aligned_cols=255  Identities=24%  Similarity=0.308  Sum_probs=199.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .++|+..++||+|+||+||+|....+++.||+|+++..  ....+.+.+|+.+|++++|||||+++++|.+.++.|||||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            56799999999999999999999999999999998653  3345679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      ||++|+|.+++.+...    +++..+..++.|+++||+|||+.  ++|+||||||+||||+.++.+||.|.         
T Consensus        85 y~~gg~L~~~l~~~~~----l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             CCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             cCCCCcHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence            9999999999986543    89999999999999999999971  48999999999999999999999882         


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----------------
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----------------  558 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----------------  558 (645)
                       ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...+...............                
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence             234589999999999999999999999999999999999999997643221100000000000                


Q ss_pred             ------hccCchhHHhhhhccC---CCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 ------YAEGRIIEAADKRLNG---AFNE-DEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ------~~~~~~~~~~d~~l~~---~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                            .......+..+.....   ..+. .....+.+++..||+.||++|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                  0000111111111100   0110 12345778899999999999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-46  Score=389.08  Aligned_cols=253  Identities=26%  Similarity=0.383  Sum_probs=207.7

Q ss_pred             HHHHHhcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeee
Q 041096          342 ELRSATRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCA  414 (645)
Q Consensus       342 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~  414 (645)
                      +|+-..++|+..+.||+|+||+||+|++..     ++..||||++...  ....++|.+|++++++++||||++++++|.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            344456789999999999999999999753     4578999998763  334577999999999999999999999999


Q ss_pred             eCCeEEEEEecCCCCCHhHHhhhcCC--------------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 041096          415 EKGELLLVYEYMPNGSLDRMLYQDSE--------------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIH  474 (645)
Q Consensus       415 ~~~~~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  474 (645)
                      +.+..++||||+++|+|.+++.....                    ....++|.+++.|+.|++.||+|||+   ++++|
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivH  163 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVH  163 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEe
Confidence            99999999999999999999975331                    12348999999999999999999999   99999


Q ss_pred             CCCCCCcEEEcCCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC-CCC
Q 041096          475 RDIKASNIMLDANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR-RPI  539 (645)
Q Consensus       475 rDlkp~NIlld~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~-~P~  539 (645)
                      |||||+|||||.++.+||+|..              +...||+.|+|||.+.+..++.++|||||||++|||++|. .||
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~  243 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  243 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence            9999999999999999998822              2346788999999999999999999999999999999986 466


Q ss_pred             CccccccchhhHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          540 ERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       540 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ......    .+...             +........+...+..+.+|+..||+.+|++||||.||+++|+++.+
T Consensus       244 ~~~~~~----e~~~~-------------v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         244 YGMAHE----EVIYY-------------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             TTSCHH----HHHHH-------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCCCHH----HHHHH-------------HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            654321    11111             11111223445556778999999999999999999999999997653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-46  Score=390.61  Aligned_cols=241  Identities=24%  Similarity=0.400  Sum_probs=198.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe----EEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS----VAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLL  421 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  421 (645)
                      .+|+..++||+|+||+||+|.+..+++    .||+|++..  .....++|.+|++++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            358889999999999999999876664    688998765  344567899999999999999999999999875 5678


Q ss_pred             EEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-----
Q 041096          422 VYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-----  496 (645)
Q Consensus       422 V~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-----  496 (645)
                      ++||+.+|+|.+++.....   .+++..+++++.|||+||+|||+   ++|+||||||+||||+.++.+||+|..     
T Consensus        88 v~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             EEEeccCCccccccccccc---CCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceec
Confidence            8999999999998876543   39999999999999999999999   999999999999999999999998821     


Q ss_pred             ---------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          497 ---------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       497 ---------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....||+.|+|||++.++.++.++|||||||++|||+| |+.||.......                 +..
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~-----------------~~~  224 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------ISS  224 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG-----------------HHH
T ss_pred             ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH-----------------HHH
Confidence                     12357999999999999999999999999999999998 788887643221                 122


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      .+....+...+..++..+.+++.+||+.||.+||||+||++.|+..
T Consensus       225 ~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         225 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             HHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            2222333344556677889999999999999999999999988754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=378.68  Aligned_cols=234  Identities=22%  Similarity=0.354  Sum_probs=188.8

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccC---CcchhHhHHHHHHHHhhcCCCCeeeeeeeeee----CCeEEEEE
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH---SHEGKTEFLAELSIIACLRHKNLVQLLGWCAE----KGELLLVY  423 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~  423 (645)
                      +..+.||+|+||+||+|.+..++..||+|.+..   .....+.|.+|+++|++++|||||++++++.+    ...+||||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            455689999999999999999999999998765   33345679999999999999999999999865    34689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEc-CCCCeeeecc-----
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQ--VIHRDIKASNIMLD-ANFNARLESS-----  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NIlld-~~~~~kl~d~-----  495 (645)
                      ||+++|+|.+++.+...    +++..+..++.||++||+|||+   ++  |+||||||+||||+ .++.+||+|.     
T Consensus        92 E~~~~g~L~~~l~~~~~----~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             eCCCCCcHHHHHhcccc----ccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            99999999999986543    8999999999999999999998   66  99999999999997 4789999872     


Q ss_pred             -----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....+||+.|||||++.+ +++.++|||||||++|||++|+.||.......   .+...+    ..+...    .
T Consensus       165 ~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~---~~~~~i----~~~~~~----~  232 (270)
T d1t4ha_         165 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYRRV----TSGVKP----A  232 (270)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHHHH----TTTCCC----G
T ss_pred             ccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH---HHHHHH----HcCCCC----c
Confidence                 223479999999998875 69999999999999999999999997543211   111111    111000    0


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                          .++......+.+++..||+.||++|||++|+++
T Consensus       233 ----~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         233 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                111122345778899999999999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=378.99  Aligned_cols=240  Identities=30%  Similarity=0.433  Sum_probs=197.5

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeee-CCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAE-KGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||.||+|.++  +..||||+++.. ...+.|.+|++++++++||||++++|+|.+ .+.+++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            45677899999999999999985  788999999763 345789999999999999999999999865 45689999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------cc
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------FT  497 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------~~  497 (645)
                      ++|+|.++|.....  ..++|..+++++.||++||+|||+   .+|+||||||+|||++.++.+|+.|.         ..
T Consensus        84 ~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~  158 (262)
T d1byga_          84 AKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  158 (262)
T ss_dssp             TTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCCc
Confidence            99999999976432  248999999999999999999999   99999999999999999999999772         22


Q ss_pred             ccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccCCC
Q 041096          498 LTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNGAF  576 (645)
Q Consensus       498 ~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  576 (645)
                      ...+|..|+|||++.++.++.++|||||||++|||+| |+.||......    .+..+             +....+...
T Consensus       159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~----~~~~~-------------i~~~~~~~~  221 (262)
T d1byga_         159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR-------------VEKGYKMDA  221 (262)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHHH-------------HTTTCCCCC
T ss_pred             cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH----HHHHH-------------HHcCCCCCC
Confidence            3467889999999999999999999999999999998 67777654322    22222             222233445


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          577 NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       577 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +......+.+++.+||+.||++||||.+++++|+.+
T Consensus       222 ~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         222 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            555667888999999999999999999999999754

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-46  Score=387.07  Aligned_cols=241  Identities=25%  Similarity=0.317  Sum_probs=198.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc----chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH----EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      +.|+..+.||+|+||+||+|+...++..||||++....    ...+.+.+|+++|++++|||||++++++.+.+..||||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            34888999999999999999999999999999986532    23457899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      |||++|+|..++....    .+++.++..++.||+.||.|||+   ++|+||||||+||||+.++.+||+|.        
T Consensus        95 E~~~~g~l~~~~~~~~----~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             ECCSEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCCCchHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            9999999987776543    39999999999999999999999   99999999999999999999999883        


Q ss_pred             ccccccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          496 FTLTAGTMGYLAPEYLQY---GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       496 ~~~~~gt~~y~APE~~~~---~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                      .....||+.|||||++.+   +.|+.++|||||||++|||++|+.||.......    ...            .......
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~----~~~------------~i~~~~~  231 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALY------------HIAQNES  231 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHH------------HHHHSCC
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH----HHH------------HHHhCCC
Confidence            233579999999999864   468999999999999999999999997643211    111            0111111


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ....+....+.+.+++..||+.||++|||++|+++  .|..
T Consensus       232 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         232 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             CCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             CCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence            11112233456888899999999999999999987  4543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-46  Score=385.34  Aligned_cols=248  Identities=30%  Similarity=0.445  Sum_probs=201.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCe--EEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGS--VAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~--~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..++||+|+||+||+|++..++.  .||||++..  .....+.|.+|+++|+++ +|||||+++|+|.+++..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            567888999999999999999987776  467887754  344567899999999999 799999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcC------------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCe
Q 041096          423 YEYMPNGSLDRMLYQDS------------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNA  490 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~  490 (645)
                      |||+++|+|.++|+...            .....++|.++++++.|||+||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            99999999999997542            223459999999999999999999999   999999999999999999999


Q ss_pred             eeeccc-----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCC-CCCccccccchhhHHHHHHhh
Q 041096          491 RLESSF-----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRR-PIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       491 kl~d~~-----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~-P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      ||+|..           ....||..|+|||.+..+.++.++|||||||++|||++|.. ||...+.    ..+.      
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~----~~~~------  236 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELY------  236 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHH------
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH----HHHH------
Confidence            998832           23468999999999999999999999999999999999765 5654321    1111      


Q ss_pred             hccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          559 YAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       559 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                             +.+....+...+...+..+.+++.+||+.||++||||++|++.|+++.+.
T Consensus       237 -------~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         237 -------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             -------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -------HHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                   11222223344455667889999999999999999999999998876543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-46  Score=383.22  Aligned_cols=234  Identities=21%  Similarity=0.286  Sum_probs=197.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||+|....+++.||||++...    ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688999999999999999999989999999998642    233467999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc-------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF-------  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~-------  496 (645)
                      ||+++|+|.+++.....    +++..+..++.|++.||+|||+   ++|+||||||+||||+.++.+|+.|..       
T Consensus        88 Ey~~gg~L~~~~~~~~~----l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             CCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             EccCCCCHHHhhhccCC----CCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            99999999999886553    9999999999999999999999   999999999999999999999998722       


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                             ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..    .+...+            ..
T Consensus       161 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~----~~~~~i------------~~  224 (288)
T d1uu3a_         161 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY----LIFQKI------------IK  224 (288)
T ss_dssp             ---------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HT
T ss_pred             CCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH----HHHHHH------------Hc
Confidence                   1246999999999999999999999999999999999999999764321    111111            11


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVF  606 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl  606 (645)
                      ..  ..++......+.+++..||+.||++|||++|++
T Consensus       225 ~~--~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         225 LE--YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             TC--CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CC--CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            11  123333455678899999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.1e-46  Score=382.70  Aligned_cols=244  Identities=20%  Similarity=0.338  Sum_probs=193.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      .+.|+..+.||+|+||+||+|....+++.||||++...  ......+.+|+++|++++|||||++++++.+++..|||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35688999999999999999999999999999998653  2334568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc---CCCCeeeecc------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD---ANFNARLESS------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld---~~~~~kl~d~------  495 (645)
                      ||++|+|.+++....    .+++.++..++.||+.||+|||+   ++|+||||||+|||+.   .++.+|+.|.      
T Consensus        88 ~~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~  160 (307)
T d1a06a_          88 LVSGGELFDRIVEKG----FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME  160 (307)
T ss_dssp             CCCSCBHHHHHHTCS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred             ccCCCcHHHhhhccc----CCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence            999999999997643    39999999999999999999999   9999999999999994   5778999872      


Q ss_pred             -----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           ....+||+.|||||++.+..++.++|||||||++|||++|+.||......    .+...+..    +      +.
T Consensus       161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~----~~~~~i~~----~------~~  226 (307)
T d1a06a_         161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA----KLFEQILK----A------EY  226 (307)
T ss_dssp             ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHT----T------CC
T ss_pred             cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH----HHHHHHhc----c------CC
Confidence                 12346999999999999999999999999999999999999999764321    11111110    0      00


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      ........+....+.+++..||+.||++|||++|+++  .|.+
T Consensus       227 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         227 EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            1111122234466788999999999999999999998  4554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-45  Score=374.13  Aligned_cols=241  Identities=23%  Similarity=0.361  Sum_probs=198.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|+..+.||+|+||.||+|++..+   +..||||.++.  .....+.|.+|++++++++|||||+++|+|.+ +..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEE
Confidence            5688889999999999999998643   45789998865  33345779999999999999999999999964 678999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF------  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~------  496 (645)
                      |||+++|+|.+++.....   .+++.+++.++.||++||+|||+   ++|+||||||+||+++.++.+|++|..      
T Consensus        86 ~E~~~~g~l~~~~~~~~~---~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EECCTTEEHHHHHHHTTT---TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEeccCCcHHhhhhccCC---CCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheecc
Confidence            999999999998876543   38999999999999999999999   999999999999999999999998821      


Q ss_pred             -------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCchhHHh
Q 041096          497 -------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA  568 (645)
Q Consensus       497 -------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  568 (645)
                             ....||+.|+|||++.++.++.++|||||||++|||++ |+.||......+    +...             +
T Consensus       160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~----~~~~-------------i  222 (273)
T d1mp8a_         160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIGR-------------I  222 (273)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH-------------H
T ss_pred             CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH----HHHH-------------H
Confidence                   22357899999999999999999999999999999998 888987654321    2111             1


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          569 DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       569 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      ........+.+.+..+.+++..||+.||++|||++||++.|+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            11112234455667788999999999999999999999998754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-45  Score=377.40  Aligned_cols=239  Identities=22%  Similarity=0.284  Sum_probs=196.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC-------cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS-------HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~-------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||+||+|....+|..||||++...       ....+.+.+|+++|++++|||||++++++.+.+..|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5789999999999999999999999999999987542       123567999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC----eeeecc-
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN----ARLESS-  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~----~kl~d~-  495 (645)
                      ||||||++|+|.+++.....    +++.++..++.|++.||+|||+   ++|+||||||+|||++.++.    .|+.|. 
T Consensus        90 iv~E~~~gg~L~~~i~~~~~----l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG  162 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG  162 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEcCCCccccchhccccc----cchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchh
Confidence            99999999999999976543    9999999999999999999999   99999999999999987764    788762 


Q ss_pred             ----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          496 ----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                                .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+    ....+...  .....
T Consensus       163 ~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~----~~~~i~~~--~~~~~  236 (293)
T d1jksa_         163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVSAV--NYEFE  236 (293)
T ss_dssp             TCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHTT--CCCCC
T ss_pred             hhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH----HHHHHHhc--CCCCC
Confidence                      223468999999999999999999999999999999999999997643221    11111000  00000


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..        ...+....+.+++..||+.||++|||++|+++
T Consensus       237 ~~--------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         237 DE--------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HH--------HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ch--------hcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00        00122356778999999999999999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-45  Score=378.32  Aligned_cols=240  Identities=26%  Similarity=0.390  Sum_probs=195.0

Q ss_pred             CceeccCCceEEEEEEECCCC---eEEEEEeccC--CcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-CeEEEEEecC
Q 041096          353 NRILGRGAFGNVYKAYFASSG---SVAAVKRSKH--SHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK-GELLLVYEYM  426 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~---~~vavK~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey~  426 (645)
                      .++||+|+||+||+|++..++   ..||||+++.  .....++|.+|+++|++++||||++++|+|.+. ...++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            468999999999999986533   4689999875  344457899999999999999999999998764 5899999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      ++|+|.+++.....   .+++..+++++.|+|+||.|||+   .+|+||||||+|||||+++.+||+|..          
T Consensus       112 ~~g~l~~~~~~~~~---~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         112 KHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             TTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             ecCchhhhhccccc---cchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence            99999999876543   37899999999999999999999   999999999999999999999998822          


Q ss_pred             ------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          497 ------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                            ....||..|+|||.+..+.++.++||||||+++|||++|+.||.......   .+..++             ..
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~---~~~~~i-------------~~  249 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYL-------------LQ  249 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHH-------------HT
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH---HHHHHH-------------Hc
Confidence                  11357899999999999999999999999999999999888876532211   111111             11


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      ..+...+..++..+.+++..||+.||++||+|+||++.|+++..
T Consensus       250 g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            11222334455678899999999999999999999999987643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.4e-45  Score=384.13  Aligned_cols=245  Identities=22%  Similarity=0.286  Sum_probs=200.9

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEec
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  425 (645)
                      .++|+..+.||+|+||.||+|....+|..||||++.... ...+.+.+|+++|++++|||||++++++.+.+..||||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            468999999999999999999999999999999987643 4456789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC--CCCeeeeccc-------
Q 041096          426 MPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA--NFNARLESSF-------  496 (645)
Q Consensus       426 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~--~~~~kl~d~~-------  496 (645)
                      |++|+|.+++.....   .+++..+..++.||+.||+|||+   ++|+||||||+||||+.  ++.+||.|..       
T Consensus       105 ~~gg~L~~~l~~~~~---~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~  178 (350)
T d1koaa2         105 MSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  178 (350)
T ss_dssp             CCSCBHHHHHTCTTS---CBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred             CCCCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence            999999999965432   39999999999999999999999   99999999999999964  5678998722       


Q ss_pred             ----cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhc
Q 041096          497 ----TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRL  572 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  572 (645)
                          ....||+.|||||++.+..++.++|||||||++|||++|+.||...+..+    +...+...          +...
T Consensus       179 ~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~~~~i~~~----------~~~~  244 (350)
T d1koaa2         179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRNVKSC----------DWNM  244 (350)
T ss_dssp             TSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHT----------CCCS
T ss_pred             ccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH----HHHHHHhC----------CCCC
Confidence                22478999999999999999999999999999999999999997643221    11111000          0000


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcC
Q 041096          573 NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNN  611 (645)
Q Consensus       573 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~  611 (645)
                      .........+.+.+++..||+.||++|||++|+++.  |..
T Consensus       245 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~  285 (350)
T d1koaa2         245 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP  285 (350)
T ss_dssp             CCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSC
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            001111223567788899999999999999999984  543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=375.25  Aligned_cols=241  Identities=23%  Similarity=0.314  Sum_probs=191.0

Q ss_pred             cCCCcCceeccCCceEEEEEEECCC---CeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASS---GSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..+.||+|+||.||+|++...   ...||||++...    ....++|.+|+++|++++|||||+++|+|.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            4688889999999999999987432   347899988652    3345689999999999999999999999976 4678


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----  496 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----  496 (645)
                      +||||+++|+|.+++.....   .+++..++.++.|+|+||+|||+   ++|+||||||+||||+.++.+|+.|..    
T Consensus        87 lv~e~~~~~~l~~~~~~~~~---~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~  160 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA  160 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeeeeecCcchhhhhhcccC---CCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhh
Confidence            99999999999998876543   39999999999999999999999   999999999999999999999998731    


Q ss_pred             -----------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 -----------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                 ....|+..|+|||++.+..++.++|||||||++|||+| |+.||...+..    ....++         
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~----~~~~~i---------  227 (273)
T d1u46a_         161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILHKI---------  227 (273)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHH---------
T ss_pred             cccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH----HHHHHH---------
Confidence                       12357889999999999999999999999999999998 89999764322    111111         


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNN  611 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~  611 (645)
                         .....+...+...+..+.+++..||+.||++||||.+|++.|++
T Consensus       228 ---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         228 ---DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             ---HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---HhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence               11122223344455678899999999999999999999999874

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4e-45  Score=372.89  Aligned_cols=244  Identities=23%  Similarity=0.277  Sum_probs=195.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----e
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----E  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~  418 (645)
                      .++|+..+.||+|+||+||+|+...+++.||||++...    ....+.|.+|++++++++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46799999999999999999999999999999998753    223457899999999999999999999987654    4


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---  495 (645)
                      .||||||+++++|.+++.....    +++.+++.++.||++||+|||+   ++|+||||||+||||+.++..++.+.   
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~----l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~  158 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIA  158 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred             EEEEEECCCCCEehhhhcccCC----CCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhh
Confidence            8999999999999999876543    9999999999999999999999   99999999999999999999988662   


Q ss_pred             ------------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          496 ------------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       496 ------------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                  ....+||+.|+|||++.+..++.++|||||||++|||+||+.||.......    +   .......+.
T Consensus       159 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----~---~~~~~~~~~  231 (277)
T d1o6ya_         159 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS----V---AYQHVREDP  231 (277)
T ss_dssp             EECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----H---HHHHHHCCC
T ss_pred             hhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH----H---HHHHHhcCC
Confidence                        123468999999999999999999999999999999999999997643211    1   111111111


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHcC
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-SMRRVFQILNN  611 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~~vl~~L~~  611 (645)
                      .       .......+.+..+.+++.+||++||.+|| |++++++.|..
T Consensus       232 ~-------~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         232 I-------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             C-------CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             C-------CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            0       00011122345678888999999999999 89999888764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-45  Score=377.92  Aligned_cols=245  Identities=24%  Similarity=0.379  Sum_probs=198.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCC-------eEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSG-------SVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKG  417 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-------~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~  417 (645)
                      ++|...+.||+|+||.||+|+....+       ..||||++...  .....++.+|...+.++ +|||||+++++|.+++
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            56788899999999999999875433       47999998763  34457899999999998 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCC------------CccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSEN------------GVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..++||||+++|+|.++|......            ...+++.+++.++.|++.||+|||+   .+|+||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceeec
Confidence            999999999999999999765421            2458999999999999999999999   9999999999999999


Q ss_pred             CCCCeeeecc--------------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCccccccchhh
Q 041096          486 ANFNARLESS--------------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVAC-GRRPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~--------------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~t-G~~P~~~~~~~~~~~~  550 (645)
                      .++..|+.|.              .....||+.|+|||.+.++.++.++|||||||++|||++ |+.||......    .
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~----~  245 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----E  245 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH----H
Confidence            9999999872              122468899999999999999999999999999999998 68888653321    1


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                      +             .+.+....+...+...+..+.+++.+||+.||++||||.||++.|+++
T Consensus       246 ~-------------~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         246 L-------------FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             H-------------HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H-------------HHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            1             122222333344445567789999999999999999999999999865

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-45  Score=376.60  Aligned_cols=248  Identities=24%  Similarity=0.358  Sum_probs=198.3

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccC--CcchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeC-C
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKH--SHEGKTEFLAELSIIACL-RHKNLVQLLGWCAEK-G  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~  417 (645)
                      .++|+..++||+|+||.||+|.+..     +++.||||+++.  .....+.+.+|...+.++ +|+||+.+++++.+. .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            3678889999999999999999753     346899999875  334456788898888887 689999999998765 4


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCC------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSE------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD  485 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld  485 (645)
                      ..++|||||++|+|.++|.....            ....++|.+++.++.||++||+|||+   ++|+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeEC
Confidence            68999999999999999976532            12348999999999999999999999   9999999999999999


Q ss_pred             CCCCeeeeccc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC-CCCCccccccchhh
Q 041096          486 ANFNARLESSF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR-RPIERETEGHKMVN  550 (645)
Q Consensus       486 ~~~~~kl~d~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~-~P~~~~~~~~~~~~  550 (645)
                      .++.+||+|..              ....||+.|+|||++.++.++.++|||||||++|||++|. .||........   
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~---  245 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---  245 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH---
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH---
Confidence            99999998821              2246899999999999999999999999999999999975 56765432211   


Q ss_pred             HHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          551 LVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       551 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                      +             ...+....+...+......+.+++.+||+.||++||||+||+++|+++.
T Consensus       246 ~-------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         246 F-------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             H-------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H-------------HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            1             1122222223344455667889999999999999999999999998653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-45  Score=376.62  Aligned_cols=247  Identities=24%  Similarity=0.358  Sum_probs=204.1

Q ss_pred             hcCCCcCceeccCCceEEEEEEEC-----CCCeEEEEEeccCC--cchhHhHHHHHHHHhhc-CCCCeeeeeeeeeeCCe
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFA-----SSGSVAAVKRSKHS--HEGKTEFLAELSIIACL-RHKNLVQLLGWCAEKGE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~  418 (645)
                      .++|+..++||+|+||.||+|++.     .++..||||+++..  .....+|.+|+.+++++ +|||||+++|+|.+.+.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            367888999999999999999863     35678999998763  33456799999999999 69999999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCC--------------CCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSE--------------NGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIML  484 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIll  484 (645)
                      .+||||||++|+|.++++....              ....+++..++.++.||++||+|||+   ++++||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccccc
Confidence            9999999999999999976542              12358999999999999999999999   999999999999999


Q ss_pred             cCCCCeeeecc--------------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC-CCccccccchh
Q 041096          485 DANFNARLESS--------------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRP-IERETEGHKMV  549 (645)
Q Consensus       485 d~~~~~kl~d~--------------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P-~~~~~~~~~~~  549 (645)
                      +.++..|+.|.              .....||+.|+|||++.++.++.++|||||||++|||+|++.| +........  
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~--  256 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--  256 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH--
Confidence            99999999772              1234689999999999999999999999999999999995544 544322111  


Q ss_pred             hHHHHHHhhhccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          550 NLVDWVWGLYAEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       550 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                                    +.+.++...+...+...+..+.+|+.+||+.||++||||.+|+++|++.
T Consensus       257 --------------~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         257 --------------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             --------------HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------------HHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence                          1223333344444555667889999999999999999999999999854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.3e-44  Score=380.69  Aligned_cols=245  Identities=21%  Similarity=0.246  Sum_probs=202.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||+||+|....+++.||||++.... ...+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            57999999999999999999999899999999987643 34567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEc--CCCCeeeeccc--------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLD--ANFNARLESSF--------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld--~~~~~kl~d~~--------  496 (645)
                      ++|+|.+++.....   .+++.++..++.||+.||+|||+   .+|+||||||+||||+  .++.+||.|..        
T Consensus       109 ~gg~L~~~~~~~~~---~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         109 SGGELFDRIAAEDY---KMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             CCCBHHHHTTCTTC---CBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCChHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence            99999988765432   39999999999999999999999   9999999999999998  56788998732        


Q ss_pred             ---cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          497 ---TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       497 ---~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                         ....||+.|+|||++.+..++.++||||+||++|||++|+.||......    .+...+..          .+....
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~----------~~~~~~  248 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKR----------CDWEFD  248 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHH----------CCCCCC
T ss_pred             CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHh----------CCCCCC
Confidence               2246899999999999999999999999999999999999999764321    11111110          011111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCC
Q 041096          574 GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNE  612 (645)
Q Consensus       574 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~  612 (645)
                      ..........+.+++..||+.||.+|||++|+++.  |++.
T Consensus       249 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            12222345567889999999999999999999873  6543

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=3.3e-44  Score=348.22  Aligned_cols=199  Identities=25%  Similarity=0.408  Sum_probs=165.9

Q ss_pred             CCceeEEeCCCCCCCeEEecceEee-CCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCC
Q 041096           22 SNNMNFDFTSFNLRNITLLGDSYLR-NGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSS  100 (645)
Q Consensus        22 ~~~~~f~~~~f~~~~~~l~G~a~~~-~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  100 (645)
                      +++++|+|++|+..||+|+|||.+. +|.||||++   .++++|||+|++||+||++.+++++||+|+|+|+|.+.+...
T Consensus         1 a~~~sF~~~~F~~~~l~l~GdA~v~~~g~i~LT~~---~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~~~~   77 (204)
T d1dhkb_           1 ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQAN   77 (204)
T ss_dssp             CCCCEEEESSCCGGGEEEESSEEECTTSCEEESSS---CSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---
T ss_pred             CccceEECCCCCccCeeEecceEEcCCCeEEeCCC---CCCCEEEEEeCCCEeccCCCCcccccEEEEEEEEEecCCCCC
Confidence            3578999999999999999999984 679999997   567999999999999999999999999999999999988778


Q ss_pred             CCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccC
Q 041096          101 FGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLK  180 (645)
Q Consensus       101 ~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~  180 (645)
                      +||||||+|+|....                ..++.+||||||+.|         |+++|+++.......    ....+.
T Consensus        78 ~gdGlaf~~~~~~~~----------------~~~~~~~vefDt~~n---------~~~~d~~~~~~~~~~----~~~~~~  128 (204)
T d1dhkb_          78 SAVGLDFVLVPVQPE----------------SKGDTVTVEFDTFLS---------RISIDVNNNDIKSVP----WDVHDY  128 (204)
T ss_dssp             CCSEEEEEEEEC----------------------CCEEEEEETTTT---------EEEEEETTEEEEEEE----CCGGGT
T ss_pred             CCceEEEEecCCCCC----------------CCCcEeeEeeEcccc---------cccCccccccccccc----cccEec
Confidence            999999999986531                224679999999864         666666654332221    135678


Q ss_pred             CCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCc---cceeeeeeeeeeec
Q 041096          181 SGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGS---TELHMIQSWSFQTS  253 (645)
Q Consensus       181 ~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~sw~f~~~  253 (645)
                      +|+.++|||+||+..++|.|++++.+ ++..+.|+..+||+.+||++|||||||+||..   .|+|+|++|+|+++
T Consensus       129 ~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~l~~~vdL~~~l~~~~yvGFSAaTG~~~~~~e~H~IlsWsFss~  203 (204)
T d1dhkb_         129 DGQNAEVRITYNSSTKVFSVSLSNPS-TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSK  203 (204)
T ss_dssp             TTSCEEEEEEEETTTTEEEEEEECTT-TCCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEEE
T ss_pred             CCCEEEEEEEEcCCCEEEEEEEecCC-CCCceeEEEEecchhccCCcEEEEEEeecCCCCCCceeeEEEEEEEEec
Confidence            89999999999999999999999766 56778999999999999999999999999964   57899999999974

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=374.46  Aligned_cols=248  Identities=23%  Similarity=0.345  Sum_probs=203.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECC-----CCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFAS-----SGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|...+.||+|+||+||+|.+..     .+..||||+++..  ......|.+|++++++++|||||+++|+|...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            567788999999999999998752     3578999998763  334456999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcC------CCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          421 LVYEYMPNGSLDRMLYQDS------ENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                      +||||+++|+|.+++....      .....++|.++.+++.|+|+||.|||+   ++|+||||||+|||||.++.+||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEee
Confidence            9999999999999987542      112347999999999999999999999   9999999999999999999999988


Q ss_pred             cc--------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC-CCCCccccccchhhHHHHHHhhh
Q 041096          495 SF--------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGR-RPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       495 ~~--------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~-~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                      ..              ....||+.|+|||.+.+..++.++|||||||++|||+||+ .||......+    ...      
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~----~~~------  246 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----VLR------  246 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH----HHH------
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH----HHH------
Confidence            22              2235889999999999999999999999999999999985 6665433211    111      


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCCC
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAEP  615 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~~  615 (645)
                             .+........+...+..+.+++..||+.+|.+||||++|+++|++..++
T Consensus       247 -------~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         247 -------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             -------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             -------HHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence                   1111112233444567899999999999999999999999999987663

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-44  Score=372.65  Aligned_cols=251  Identities=23%  Similarity=0.307  Sum_probs=193.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----eEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----ELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~  423 (645)
                      +.|...+.||+|+||.||+|++.  |..||||++.........+..|+..+.+++|||||+++|+|.+.+    .+|+||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            45667789999999999999975  789999998764433333445566667889999999999998754    689999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC-----EQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      |||++|+|.++|++..     ++|.++++++.|+|.||+|||+..     .++|+||||||+||||+.++.+||+|..  
T Consensus        81 Ey~~~g~L~~~l~~~~-----l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          81 DYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             ECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ecccCCCHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            9999999999997642     899999999999999999999732     3699999999999999999999998731  


Q ss_pred             --------------cccccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcCCCCCCccccccchhh------
Q 041096          497 --------------TLTAGTMGYLAPEYLQYGT------ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVN------  550 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~~~------~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~------  550 (645)
                                    ....||++|+|||++.+..      ++.++|||||||+||||+||..|+...........      
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence                          2246899999999987643      57799999999999999999988765332211100      


Q ss_pred             -HHHHHHhhhccCchhHHhhhhccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCC
Q 041096          551 -LVDWVWGLYAEGRIIEAADKRLNGAF-----NEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEA  613 (645)
Q Consensus       551 -l~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~  613 (645)
                       ..+....        ...++.++...     +.+.+..+.+++..||+.||++||||.||++.|+++.
T Consensus       236 ~~~~~~~~--------~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         236 PSVEEMRK--------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CCHHHHHH--------HHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chHHHHHH--------HHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence             0011111        11122222222     2345677999999999999999999999999998653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-44  Score=372.11  Aligned_cols=235  Identities=25%  Similarity=0.335  Sum_probs=199.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|+...++..||||++.+.    ....+.+.+|+.+|++++||||+++++++.+.+.+|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5789999999999999999999999999999998752    234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      |||++|+|.+++.....    ++......++.||+.||+|||+   ++|+||||||+||||+.++..||.|.        
T Consensus        85 ey~~gg~L~~~~~~~~~----~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          85 EYANGGELFFHLSRERV----FTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eccCCCchhhhhhcccC----CcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999999987654    8999999999999999999999   99999999999999999999999872        


Q ss_pred             ----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhh
Q 041096          496 ----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKR  571 (645)
Q Consensus       496 ----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  571 (645)
                          ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...+...    +....            ....
T Consensus       158 ~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~----~~~~i------------~~~~  221 (337)
T d1o6la_         158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER----LFELI------------LMEE  221 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH------------HHCC
T ss_pred             CCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH----HHHHH------------hcCC
Confidence                123579999999999999999999999999999999999999998654211    11110            0111


Q ss_pred             ccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          572 LNGAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       572 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                        ..++......+.+++..||+.||++||+     ++|+++
T Consensus       222 --~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             --CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence              1233344456778899999999999995     788876

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.2e-44  Score=372.55  Aligned_cols=235  Identities=21%  Similarity=0.282  Sum_probs=199.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||+||+|+.+.+|..||||++...    ....+.+.+|+.++++++|||||++++++.+.+..|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5688999999999999999999999999999998642    234567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      |||++|+|..++.....    +++.....++.||+.||+|||+   ++|+||||||+||||+.++.+||.|.        
T Consensus        84 E~~~gg~l~~~~~~~~~----~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~  156 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR----FPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  156 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS----CCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             eecCCcccccccccccc----ccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEecc
Confidence            99999999999987654    7889999999999999999999   99999999999999999999999882        


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                       ....+||+.|||||++.+..++.++||||+||++|||++|+.||...+...    +...            +....  .
T Consensus       157 ~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~------------i~~~~--~  218 (316)
T d1fota_         157 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----TYEK------------ILNAE--L  218 (316)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHH------------HHHCC--C
T ss_pred             ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHH----HHHH------------HHcCC--C
Confidence             234579999999999999999999999999999999999999997643211    1111            11111  1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                      .++......+.+++..||..||.+||     |++++++
T Consensus       219 ~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         219 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            22333445678889999999999996     8999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-44  Score=370.25  Aligned_cols=242  Identities=22%  Similarity=0.289  Sum_probs=201.6

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++|...+.||+|+||+||+|....+++.||||.++........+.+|+++|++++|||||++++++.+.+.+|||||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            36788999999999999999999999999999999887666778999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC--Ceeeecc---------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF--NARLESS---------  495 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~--~~kl~d~---------  495 (645)
                      ++|+|.+++.....   .+++.++..++.||++||+|||+   .+|+||||||+|||++.+.  ..|+.|.         
T Consensus        84 ~gg~L~~~i~~~~~---~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          84 SGLDIFERINTSAF---ELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCBHHHHHTSSSC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            99999999975432   38999999999999999999999   9999999999999998544  6777762         


Q ss_pred             --ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhcc
Q 041096          496 --FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLN  573 (645)
Q Consensus       496 --~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  573 (645)
                        .....||+.|+|||.+.+..++.++||||+||++|||++|+.||...........+                ..... 
T Consensus       158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i----------------~~~~~-  220 (321)
T d1tkia_         158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI----------------MNAEY-  220 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----------------HHTCC-
T ss_pred             CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH----------------HhCCC-
Confidence              12246899999999999999999999999999999999999999765432111111                11000 


Q ss_pred             CCCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          574 GAFNED----EMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       574 ~~~~~~----~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                       .++..    ....+.+++..|+..||++|||++|+++  .+++.
T Consensus       221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -CCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence             11211    2345778899999999999999999998  45543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-43  Score=371.11  Aligned_cols=235  Identities=22%  Similarity=0.255  Sum_probs=199.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVY  423 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~  423 (645)
                      ++|+..+.||+|+||.||+|.+..+|+.||||++...    ....+.+.+|+++|+.++|||||++++++.+.+..++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4789999999999999999999999999999988642    233467899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--------
Q 041096          424 EYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--------  495 (645)
Q Consensus       424 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--------  495 (645)
                      ||+.+|+|..++.....    +++.++..++.||+.||.|||+   ++|+||||||+||||+.++.+||+|.        
T Consensus       121 e~~~~g~l~~~l~~~~~----l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~  193 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             ECCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             ccccccchhhhHhhcCC----CCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence            99999999999977543    8999999999999999999999   99999999999999999999999872        


Q ss_pred             -ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhhhccC
Q 041096          496 -FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADKRLNG  574 (645)
Q Consensus       496 -~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  574 (645)
                       .....||+.|||||++.+..++.++|||||||++|||++|+.||...+..    .+...+            ....  .
T Consensus       194 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i------------~~~~--~  255 (350)
T d1rdqe_         194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKI------------VSGK--V  255 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHCC--C
T ss_pred             ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH----HHHHHH------------hcCC--C
Confidence             23357999999999999999999999999999999999999999764321    111111            1111  1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCC-----CCHHHHHH
Q 041096          575 AFNEDEMKRLLLVGLSCANPDSSAR-----PSMRRVFQ  607 (645)
Q Consensus       575 ~~~~~~~~~l~~l~~~Cl~~dP~~R-----Pt~~~vl~  607 (645)
                      ..+......+.+++..||+.||.+|     ||++++++
T Consensus       256 ~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            2233345567888999999999999     48999986

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.2e-43  Score=361.46  Aligned_cols=239  Identities=23%  Similarity=0.315  Sum_probs=196.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc----------hhHhHHHHHHHHhhcC-CCCeeeeeeeeeeC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE----------GKTEFLAELSIIACLR-HKNLVQLLGWCAEK  416 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~----------~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~  416 (645)
                      ++|+..+.||+|+||+||+|+...+++.||||++.....          ..+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            578899999999999999999998999999999865321          1245889999999997 99999999999999


Q ss_pred             CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-
Q 041096          417 GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-  495 (645)
Q Consensus       417 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-  495 (645)
                      +..|||||||++|+|.++|.....    +++.++..++.||++||+|||+   ++|+||||||+||||+.++..||+|. 
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~----l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             cceEEEEEcCCCchHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccch
Confidence            999999999999999999976543    9999999999999999999999   99999999999999999999999872 


Q ss_pred             ----------ccccccCCcccCcccccC------CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhh
Q 041096          496 ----------FTLTAGTMGYLAPEYLQY------GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLY  559 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~------~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~  559 (645)
                                .....||+.|+|||.+.+      ..++.++||||+||++|||++|+.||...........+.       
T Consensus       156 ~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~-------  228 (277)
T d1phka_         156 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM-------  228 (277)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-------
T ss_pred             heeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHH-------
Confidence                      233568999999998853      457889999999999999999999998643211111110       


Q ss_pred             ccCchhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 AEGRIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                       .+.      ............+.+.+++.+||++||++|||++||++
T Consensus       229 -~~~------~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         229 -SGN------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             -HTC------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -hCC------CCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence             000      00111112234457888999999999999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=369.41  Aligned_cols=235  Identities=23%  Similarity=0.339  Sum_probs=196.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHHHHHHh-hcCCCCeeeeeeeeeeCCeEEEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAELSIIA-CLRHKNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~lV  422 (645)
                      ++|...+.||+|+||+||+|+...+++.||||++.+.    ....+.+..|..++. .++|||||++++++.+++..|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788999999999999999999999999999998652    233456777777765 68999999999999999999999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-------
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-------  495 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-------  495 (645)
                      |||+++|+|.+++.....    ++..++..++.||+.||+|||+   ++|+||||||+|||++.++.+|+.|.       
T Consensus        82 mEy~~~g~L~~~i~~~~~----~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             EECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EeecCCCcHHHHhhccCC----CCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            999999999999987554    8999999999999999999999   99999999999999999999999872       


Q ss_pred             -----ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAADK  570 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  570 (645)
                           .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..    .+...+    ..+        
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~~i----~~~--------  218 (320)
T d1xjda_         155 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSI----RMD--------  218 (320)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHC--------
T ss_pred             cccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH----HHHHHH----HcC--------
Confidence                 22347899999999999999999999999999999999999999764321    111111    000        


Q ss_pred             hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 041096          571 RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMR-RVFQ  607 (645)
Q Consensus       571 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-~vl~  607 (645)
                        ...++......+.+++..||+.||++|||++ ++++
T Consensus       219 --~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         219 --NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             --CCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence              1123333455678899999999999999996 6753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.8e-43  Score=370.01  Aligned_cols=238  Identities=25%  Similarity=0.315  Sum_probs=193.1

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC----cchhHhHHHH---HHHHhhcCCCCeeeeeeeeeeCCeEE
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS----HEGKTEFLAE---LSIIACLRHKNLVQLLGWCAEKGELL  420 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~E---i~~l~~l~H~niv~l~g~~~~~~~~~  420 (645)
                      ++|+..++||+|+||.||+|+...+|..||||++...    ......+.+|   +++++.++|||||++++++.+.+.+|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            6799999999999999999999999999999988642    1223334444   66777778999999999999999999


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ||||||++|+|.++|.....    +++..+..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|.     
T Consensus        84 ivmE~~~gg~L~~~l~~~~~----~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGV----FSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EEEEecCCCcHHHHHHhccc----ccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeee
Confidence            99999999999999987543    8899999999999999999999   99999999999999999999999882     


Q ss_pred             -----ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHhh
Q 041096          496 -----FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAAD  569 (645)
Q Consensus       496 -----~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  569 (645)
                           ....+||+.|+|||++.. ..++.++|||||||+||||++|+.||........ ..+..   ..           
T Consensus       157 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~~~---~~-----------  221 (364)
T d1omwa3         157 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDR---MT-----------  221 (364)
T ss_dssp             CSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH-HHHHH---HS-----------
T ss_pred             cCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH---hc-----------
Confidence                 233579999999999975 5689999999999999999999999976433211 11110   00           


Q ss_pred             hhccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 041096          570 KRLNGAFNEDEMKRLLLVGLSCANPDSSARPS-----MRRVFQ  607 (645)
Q Consensus       570 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~~vl~  607 (645)
                      .......+......+.+++..||+.||++|||     ++|+++
T Consensus       222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         222 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            00011222334456788999999999999999     688875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-43  Score=361.40  Aligned_cols=260  Identities=20%  Similarity=0.279  Sum_probs=195.9

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..++||+|+||+||+|++..+++.||||++....   ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57889999999999999999999899999999986532   335679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      |+.+ ++..++....  ...+++.++..++.|++.||+|||+   ++|+||||||+|||++.++..|++|.         
T Consensus        82 ~~~~-~~~~~~~~~~--~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             CCSE-EHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             ecCC-chhhhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCC
Confidence            9965 5555554332  2239999999999999999999999   99999999999999999999999882         


Q ss_pred             ---ccccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh-hh
Q 041096          496 ---FTLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA-DK  570 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-d~  570 (645)
                         .....||+.|+|||.+.... ++.++||||+||++|||++|+.||...+.............. ..+....... .+
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~  234 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGVTSMP  234 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCTTTSTTGGGST
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCC-Cchhhcccccccc
Confidence               22347999999999877655 588999999999999999999999765432211111111000 0000000000 00


Q ss_pred             hccCCC-----------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCC
Q 041096          571 RLNGAF-----------NEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAE  614 (645)
Q Consensus       571 ~l~~~~-----------~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~  614 (645)
                      ......           .......+.+++.+|++.||++|||++|+++.  |++..+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence            000000           01123567788899999999999999999984  765543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=364.84  Aligned_cols=252  Identities=23%  Similarity=0.269  Sum_probs=190.5

Q ss_pred             CceeccCCceEEEEEEECCCCeEEEEEeccCCcc------hhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEecC
Q 041096          353 NRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE------GKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       353 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      .++||+|+||+||+|.+..+++.||||+++....      ..+.+.+|+.++++++|||||++++++.+++..||||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            5789999999999999999999999999865321      2356899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc----------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF----------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~----------  496 (645)
                      .++++..+.....    .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++..||+|..          
T Consensus        83 ~~~~~~~~~~~~~----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          83 ETDLEVIIKDNSL----VLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             SEEHHHHHTTCCS----SCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             cchHHhhhhhccc----CCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence            8887776654332    38889999999999999999999   999999999999999999999998822          


Q ss_pred             --cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh---hh
Q 041096          497 --TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA---DK  570 (645)
Q Consensus       497 --~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---d~  570 (645)
                        ...+||+.|+|||++... .++.++|||||||++|||++|+.||......+....+.+.. .........+..   ..
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~-~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL-GTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCTTTSSSTTSSTTC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhc-CCCChhhccchhccchh
Confidence              224689999999998754 57999999999999999999999997654322221111110 000000000000   00


Q ss_pred             h---ccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCC
Q 041096          571 R---LNGAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNE  612 (645)
Q Consensus       571 ~---l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~  612 (645)
                      .   .....+     ....+.+.+++..||+.||++|||++|+++  .|++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence            0   000011     112356788999999999999999999997  57643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-43  Score=367.30  Aligned_cols=252  Identities=17%  Similarity=0.239  Sum_probs=194.7

Q ss_pred             hcCCCcC-ceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhc-CCCCeeeeeeeeee----CCeEE
Q 041096          347 TRGFHSN-RILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACL-RHKNLVQLLGWCAE----KGELL  420 (645)
Q Consensus       347 ~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~----~~~~~  420 (645)
                      .++|... ++||+|+||+||+|++..+++.||||+++.    ...+.+|++++.++ +|||||++++++.+    +..+|
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            3578776 469999999999999998999999999865    34577899987655 89999999999865    45789


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeecc--
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESS--  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~--  495 (645)
                      ||||||++|+|.++|.....  ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.   ++.+|+.|.  
T Consensus        86 ivmEy~~gg~L~~~i~~~~~--~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSC--CCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEECCCCCcHHHHHHhcCC--CCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccce
Confidence            99999999999999976432  349999999999999999999999   99999999999999986   445888772  


Q ss_pred             ---------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhH
Q 041096          496 ---------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIE  566 (645)
Q Consensus       496 ---------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~  566 (645)
                               ....+||+.|+|||++.+..|+.++|||||||+||||++|+.||...........+.    .....+.   
T Consensus       161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~----~~i~~~~---  233 (335)
T d2ozaa1         161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----TRIRMGQ---  233 (335)
T ss_dssp             CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCSCS---
T ss_pred             eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHH----HHHhcCC---
Confidence                     233479999999999999999999999999999999999999997644322111110    0000000   


Q ss_pred             HhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCC
Q 041096          567 AADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLV  617 (645)
Q Consensus       567 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~  617 (645)
                         ..+...........+.+++..||+.||++|||++|+++  .+.+....+.
T Consensus       234 ---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~  283 (335)
T d2ozaa1         234 ---YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ  283 (335)
T ss_dssp             ---SSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCC
T ss_pred             ---CCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCC
Confidence               00000001233467888999999999999999999998  3554444333

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=358.15  Aligned_cols=255  Identities=21%  Similarity=0.270  Sum_probs=190.7

Q ss_pred             hcCCCcCceeccCCceEEEEEEECC-CCeEEEEEeccC---CcchhHhHHHHHHHHhhc---CCCCeeeeeeeeee----
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFAS-SGSVAAVKRSKH---SHEGKTEFLAELSIIACL---RHKNLVQLLGWCAE----  415 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~~~~---~~~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~----  415 (645)
                      .++|+..+.||+|+||+||+|.+.. +++.||||++..   .......+.+|+.+++.|   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            4689999999999999999999854 467899998764   222344677888887766   79999999999853    


Q ss_pred             -CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          416 -KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       416 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                       ....+++|||+.++++........   ..+++.....++.|++.||+|||+   ++|+||||||+|||++.++..|+.|
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~d  159 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD  159 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCceEEEEEEeccCCchhhhhhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecc
Confidence             347899999998877765544332   238999999999999999999999   9999999999999999999999987


Q ss_pred             c-----------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----h
Q 041096          495 S-----------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----Y  559 (645)
Q Consensus       495 ~-----------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~  559 (645)
                      .           .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.......    +
T Consensus       160 fg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  239 (305)
T d1blxa_         160 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  239 (305)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             hhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence            2           234578999999999999999999999999999999999999998654322222222111000    0


Q ss_pred             cc-CchhHHhhhhc----cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          560 AE-GRIIEAADKRL----NGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       560 ~~-~~~~~~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      .. ...........    ...+.....+.+.+++.+||+.||++|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00 00000000000    00111223356778889999999999999999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=352.46  Aligned_cols=229  Identities=23%  Similarity=0.394  Sum_probs=189.7

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc-------chhHhHHHHHHHHhhcC--CCCeeeeeeeeeeCCe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH-------EGKTEFLAELSIIACLR--HKNLVQLLGWCAEKGE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~-------~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~  418 (645)
                      ++|+..++||+|+||+||+|+...+++.||||++....       .....+.+|+.++++++  |||||++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            57899999999999999999999999999999876421       12345789999999997  8999999999999999


Q ss_pred             EEEEEecCCC-CCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCC-CCeeeecc-
Q 041096          419 LLLVYEYMPN-GSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDAN-FNARLESS-  495 (645)
Q Consensus       419 ~~lV~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~-~~~kl~d~-  495 (645)
                      .++||||+.+ +++.+++.....    +++.++..++.||++||+|||+   ++|+||||||+||||+.+ +.+|+.|. 
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~----l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG  156 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGA----LQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG  156 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             EEEEEEeccCcchHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccc
Confidence            9999999975 678888876543    8999999999999999999999   999999999999999855 68889872 


Q ss_pred             ---------ccccccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchh
Q 041096          496 ---------FTLTAGTMGYLAPEYLQYGTA-TEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRII  565 (645)
Q Consensus       496 ---------~~~~~gt~~y~APE~~~~~~~-t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~  565 (645)
                               .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.....      +..        +   
T Consensus       157 ~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~--------~---  219 (273)
T d1xwsa_         157 SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR--------G---  219 (273)
T ss_dssp             TCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--------C---
T ss_pred             cceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH------Hhh--------c---
Confidence                     233579999999999987765 5779999999999999999999975311      100        0   


Q ss_pred             HHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          566 EAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       566 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                         ..    .++......+.+++.+||+.||++|||++|+++
T Consensus       220 ---~~----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         220 ---QV----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             ---CC----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---cc----CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence               00    112223456778889999999999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.2e-42  Score=349.88  Aligned_cols=251  Identities=21%  Similarity=0.320  Sum_probs=191.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..++||+|+||+||+|+++ +++.||||++....   ...+.+.+|+.+|++++|||||++++++...+..++++|
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            57888999999999999999986 57899999986632   235679999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---------  495 (645)
                      |+.++.+..+.....    .++..++..++.||+.||+|||+   .+|+||||||+||||+.++..|+.|.         
T Consensus        81 ~~~~~~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             CCSEEHHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             eehhhhHHHHHhhcC----CcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            998776666654433    39999999999999999999999   99999999999999999999999882         


Q ss_pred             ---ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc---hhHHh
Q 041096          496 ---FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR---IIEAA  568 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~  568 (645)
                         .....|++.|+|||.+... .++.++|||||||++|||++|+.||......+........ ........   ..+..
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI-LGTPNSKNWPNVTELP  232 (286)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCCTTTSTTGGGST
T ss_pred             ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHh-hCCCChhhccchhhhh
Confidence               2234688999999998754 5699999999999999999999999765432211111110 00000000   00000


Q ss_pred             --hhhcc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          569 --DKRLN-------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       569 --d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                        +....       ..........+.+++.+|++.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              00000       0111222356778899999999999999999984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-40  Score=344.55  Aligned_cols=254  Identities=20%  Similarity=0.266  Sum_probs=189.0

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee--------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE--------  415 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--------  415 (645)
                      .++|+..+.||+|+||+||+|++..+++.||||++...   ....+.+.+|+++|++++|+||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36889999999999999999999989999999987653   3345678999999999999999999998865        


Q ss_pred             CCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc
Q 041096          416 KGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS  495 (645)
Q Consensus       416 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~  495 (645)
                      .+..++||||+.++.+..+.....    .++......++.|+++||+|||+   ++|+||||||+||||+.++.+|+.|.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~----~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~df  161 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF  161 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             CceEEEEEeccCCCccchhhhccc----ccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeec
Confidence            346899999998877765554332    38889999999999999999999   99999999999999999999999772


Q ss_pred             c----------------cccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh
Q 041096          496 F----------------TLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL  558 (645)
Q Consensus       496 ~----------------~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~  558 (645)
                      .                ...+||+.|+|||++.+. .++.++||||+||++|||++|+.||...........+.......
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~  241 (318)
T d3blha1         162 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI  241 (318)
T ss_dssp             TTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            1                224689999999998765 68999999999999999999999997654322221111111100


Q ss_pred             hc-------cCchhHHhhhhccCCCCH-H------HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          559 YA-------EGRIIEAADKRLNGAFNE-D------EMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       559 ~~-------~~~~~~~~d~~l~~~~~~-~------~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                      ..       .................. +      ....+.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            00       000000000000000111 1      1234567899999999999999999997

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=349.75  Aligned_cols=261  Identities=18%  Similarity=0.240  Sum_probs=191.5

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC------
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG------  417 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------  417 (645)
                      .++|+..+.||+|+||+||+|....+++.||||++...   ....+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            36788999999999999999999999999999998753   233567899999999999999999999987654      


Q ss_pred             eEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc--
Q 041096          418 ELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS--  495 (645)
Q Consensus       418 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~--  495 (645)
                      ++|+||||+ +.+|..+.....     +++..+..++.||+.||+|||+   ++|+||||||+|||++.++..|+.|.  
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEK-----LGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEecc-cccHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccc
Confidence            579999999 667887775432     9999999999999999999999   99999999999999999999999872  


Q ss_pred             -------ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHH-------Hhhhc
Q 041096          496 -------FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWV-------WGLYA  560 (645)
Q Consensus       496 -------~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~-------~~~~~  560 (645)
                             .+...||+.|+|||.+.+. .++.++||||+||++|||++|+.||...+............       +....
T Consensus       168 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T d1cm8a_         168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  247 (346)
T ss_dssp             CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             eeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhc
Confidence                   3445799999999998764 56899999999999999999999997654322111111100       00000


Q ss_pred             cCchhHHhhhhcc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCCCC
Q 041096          561 EGRIIEAADKRLN-------GAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEPLV  617 (645)
Q Consensus       561 ~~~~~~~~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~~~  617 (645)
                       ..........+.       ..........+.+++..||+.||++|||++|+++.  |++..+...
T Consensus       248 -~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~  312 (346)
T d1cm8a_         248 -SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED  312 (346)
T ss_dssp             -CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred             -chhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccc
Confidence             000000000000       00111223456788899999999999999999984  776654443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-40  Score=338.73  Aligned_cols=257  Identities=19%  Similarity=0.241  Sum_probs=197.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E  424 (645)
                      ++|+..+.||+|+||+||+|++..+++.||||+++..   ......+.+|+.++++++||||++++++|.+.+..++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5788999999999999999999999999999998653   2345778999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--------  496 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--------  496 (645)
                      ++.+++|..++.....    +++..+..++.|++.||+|||+   ++|+||||||+|||++.++..|+.|..        
T Consensus        82 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          82 FCDQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSEEHHHHHHHTTTC----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             eccccccccccccccc----cchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCC
Confidence            9999998888765433    8899999999999999999999   999999999999999999999998722        


Q ss_pred             ----cccccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch---hHHh
Q 041096          497 ----TLTAGTMGYLAPEYLQYGT-ATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI---IEAA  568 (645)
Q Consensus       497 ----~~~~gt~~y~APE~~~~~~-~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~  568 (645)
                          ....++..|+|||.+.... ++.++||||+||++|||++|+.||............+............   ....
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (292)
T d1unla_         155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             CccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence                2235678899999987665 6999999999999999999999976533222111111111110000000   0000


Q ss_pred             hh---------hccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcC
Q 041096          569 DK---------RLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNN  611 (645)
Q Consensus       569 d~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~  611 (645)
                      +.         .-...........+.+++.+|++.||++|||++|+++  .|++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            00         0000112223356778889999999999999999987  4554

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-40  Score=343.97  Aligned_cols=265  Identities=18%  Similarity=0.218  Sum_probs=193.8

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC--cchhHhHHHHHHHHhhcCCCCeeeeeeeeeeCC----eEE
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS--HEGKTEFLAELSIIACLRHKNLVQLLGWCAEKG----ELL  420 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~  420 (645)
                      +.+|+..+.||+|+||+||+|+...+++.||||++...  ....+.+.+|+++|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            35688999999999999999999989999999998753  334567899999999999999999999987643    234


Q ss_pred             EEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc-----
Q 041096          421 LVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS-----  495 (645)
Q Consensus       421 lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~-----  495 (645)
                      ++++|+.+|+|.+++..+.     +++..+..++.|++.||+|||+   ++|+||||||+||||+.++..||.|.     
T Consensus        87 ~l~~~~~~g~L~~~l~~~~-----l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQH-----LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeecCCchhhhhhcCC-----CCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence            4455667999999997542     8999999999999999999999   99999999999999999999999872     


Q ss_pred             ----------ccccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC--
Q 041096          496 ----------FTLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG--  562 (645)
Q Consensus       496 ----------~~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~--  562 (645)
                                ....+||+.|+|||++.. ..++.++||||+||++|||++|+.||......+.... ...........  
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~  237 (345)
T d1pmea_         159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH-ILGILGSPSQEDL  237 (345)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCSCCHHHH
T ss_pred             ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHH-HhhhccCCChhhh
Confidence                      223468999999999854 5678999999999999999999999976432111111 10000000000  


Q ss_pred             ------chhHHhhhh-ccCCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HcCCCCCCCCCC
Q 041096          563 ------RIIEAADKR-LNGAFNE-----DEMKRLLLVGLSCANPDSSARPSMRRVFQI--LNNEAEPLVVPK  620 (645)
Q Consensus       563 ------~~~~~~d~~-l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~--L~~~~~~~~~p~  620 (645)
                            ......... .....+.     .....+.+++..|++.||++|||++|+++.  |+...++...|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~~~  309 (345)
T d1pmea_         238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI  309 (345)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGSCC
T ss_pred             hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccCcc
Confidence                  000000000 0000111     112357789999999999999999999984  665555444443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.7e-40  Score=338.60  Aligned_cols=249  Identities=14%  Similarity=0.131  Sum_probs=198.3

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||+||+|++..+++.||||++... .....+.+|++.++.|+| +|++.+++++.++...++||||+
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc-cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            5789999999999999999999989999999987553 234567889999999975 89999999999999999999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC-----CCCeeeeccc-----
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA-----NFNARLESSF-----  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~-----~~~~kl~d~~-----  496 (645)
                       +++|.+++.....   .+++.++..++.|++.||+|||+   ++|+||||||+||||+.     ++.+|+.|..     
T Consensus        84 -~~~l~~~~~~~~~---~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          84 -GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             -CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             -CCCHHHHHHhhcc---chhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence             7899999876543   38999999999999999999999   99999999999999975     4567886621     


Q ss_pred             --------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccC
Q 041096          497 --------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEG  562 (645)
Q Consensus       497 --------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~  562 (645)
                                    ...+||+.|||||.+.+..++.++|||||||++|||++|+.||............ ..+.......
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~-~~i~~~~~~~  235 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-ERIGEKKQST  235 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH-HHHHHHHHHS
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHH-HHHHhccCCC
Confidence                          1236999999999999999999999999999999999999999765433222111 1110000000


Q ss_pred             chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCCCC
Q 041096          563 RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNEAE  614 (645)
Q Consensus       563 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~~~  614 (645)
                      .     -+.+..    +.++.+.+++..|+..+|++||+++.+.+.|++..+
T Consensus       236 ~-----~~~l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         236 P-----LRELCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             C-----HHHHTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             C-----hHHhcC----CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            0     011111    234567888899999999999999999888876543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4e-40  Score=339.43  Aligned_cols=247  Identities=18%  Similarity=0.175  Sum_probs=189.2

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeee-eeeeeCCeEEEEEecC
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLL-GWCAEKGELLLVYEYM  426 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~-g~~~~~~~~~lV~Ey~  426 (645)
                      ++|+..+.||+|+||.||+|++..+++.||||++.... ..+++..|++++++++|+|++..+ ++..+.+..++||||+
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            46899999999999999999999899999999876533 345688999999999877655554 5556778899999999


Q ss_pred             CCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcC---CCCeeeeccc-------
Q 041096          427 PNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDA---NFNARLESSF-------  496 (645)
Q Consensus       427 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~---~~~~kl~d~~-------  496 (645)
                       +++|...+.....   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.   +..+++.|..       
T Consensus        86 -~~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          86 -GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             -CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             -CCchhhhhhhccC---CCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence             6677776654433   38999999999999999999999   99999999999999863   4467776621       


Q ss_pred             ------------cccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCch
Q 041096          497 ------------TLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRI  564 (645)
Q Consensus       497 ------------~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~  564 (645)
                                  ....||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+......    
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~----  234 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS----  234 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH----
T ss_pred             cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCC----
Confidence                        2236999999999999999999999999999999999999999765433322222111100000    


Q ss_pred             hHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHcCC
Q 041096          565 IEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQILNNE  612 (645)
Q Consensus       565 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~~L~~~  612 (645)
                        ...+.+    ....+..+.+++..||+.+|++||++.++.+.|+..
T Consensus       235 --~~~~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         235 --TPIEVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             --SCHHHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             --CChhHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence              000111    112345688889999999999999999998888754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=350.36  Aligned_cols=257  Identities=23%  Similarity=0.291  Sum_probs=188.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCeeeeeeeeeeC------CeEEEE
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLLGWCAEK------GELLLV  422 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV  422 (645)
                      +|+..++||+|+||+||+|++..+++.||||++.....   ...+|+++|++++|+||++++++|...      ..++||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            46677899999999999999999999999999876432   334799999999999999999998543      358999


Q ss_pred             EecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeeccc-----
Q 041096          423 YEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESSF-----  496 (645)
Q Consensus       423 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~~-----  496 (645)
                      ||||+++ +...+.........+++.++..++.||+.||+|||+   ++|+||||||+||||+.++ ..||.|..     
T Consensus        98 ~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          98 LDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999765 444443322223459999999999999999999998   9999999999999999775 78898722     


Q ss_pred             ------cccccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCchhHHh-
Q 041096          497 ------TLTAGTMGYLAPEYLQY-GTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGRIIEAA-  568 (645)
Q Consensus       497 ------~~~~gt~~y~APE~~~~-~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-  568 (645)
                            ....||..|+|||.+.+ ..++.++||||+||++|||++|+.||......+....+.... +........+.. 
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~-g~~~~~~~~~~~~  252 (350)
T d1q5ka_         174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-GTPTREQIREMNP  252 (350)
T ss_dssp             CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH-CCCCHHHHHHHCC
T ss_pred             cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHh-CCChHHhhhhhcc
Confidence                  23468999999998775 568999999999999999999999997654322221111110 000000000000 


Q ss_pred             ---hhh--------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCC
Q 041096          569 ---DKR--------LNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEA  613 (645)
Q Consensus       569 ---d~~--------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~  613 (645)
                         +..        ............+.+++.+||+.||++|||++|+++  +|++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence               000        000111223445778889999999999999999997  455543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=338.94  Aligned_cols=239  Identities=23%  Similarity=0.289  Sum_probs=196.0

Q ss_pred             cCCCcCceeccCCceEEEEEEE---CCCCeEEEEEeccCC-----cchhHhHHHHHHHHhhcCC-CCeeeeeeeeeeCCe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYF---ASSGSVAAVKRSKHS-----HEGKTEFLAELSIIACLRH-KNLVQLLGWCAEKGE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~---~~~~~~vavK~~~~~-----~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~  418 (645)
                      ++|+..+.||+|+||+||+|..   +.+|+.||||.++..     ....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5699999999999999999987   446899999988652     2235678999999999977 899999999999999


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeeccc--
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESSF--  496 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~~--  496 (645)
                      .+++|||+.+|+|.+++.....    +.......++.|++.||+|||+   .+|+||||||+||||+.++.+||.|..  
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~----~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRER----FTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eeeeeecccccHHHHHHHhccc----ccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccch
Confidence            9999999999999999987654    6788899999999999999999   999999999999999999999998722  


Q ss_pred             -----------cccccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhhhccCc
Q 041096          497 -----------TLTAGTMGYLAPEYLQYG--TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGLYAEGR  563 (645)
Q Consensus       497 -----------~~~~gt~~y~APE~~~~~--~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~~~~~~  563 (645)
                                 ....|++.|+|||.+...  .++.++|||||||+||||++|+.||...........+....        
T Consensus       177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~--------  248 (322)
T d1vzoa_         177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--------  248 (322)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--------
T ss_pred             hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc--------
Confidence                       234689999999999764  46889999999999999999999998765433322222111        


Q ss_pred             hhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 041096          564 IIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARP-----SMRRVFQ  607 (645)
Q Consensus       564 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~~vl~  607 (645)
                          ...  ...++.+....+.+++..||++||++||     |++|+++
T Consensus       249 ----~~~--~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         249 ----LKS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ----HHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----ccC--CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                011  1123344567788899999999999999     4889886

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-40  Score=344.81  Aligned_cols=250  Identities=21%  Similarity=0.225  Sum_probs=188.4

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCC---cchhHhHHHHHHHHhhcCCCCeeeeeeeeee------CCe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHS---HEGKTEFLAELSIIACLRHKNLVQLLGWCAE------KGE  418 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~------~~~  418 (645)
                      ++|+..++||+|+||+||+|.+..+++.||||++...   ....+.+.+|+.++++++|||||++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            6799999999999999999999999999999998763   3344578899999999999999999999864      368


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---  495 (645)
                      .|+||||+.++ +.+.+..      .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++..++.|.   
T Consensus        97 ~~iv~Ey~~~~-l~~~~~~------~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             EEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             eEEEEeccchH-HHHhhhc------CCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhh
Confidence            99999999655 4444432      28999999999999999999999   99999999999999999999999772   


Q ss_pred             --------ccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh----hhc---
Q 041096          496 --------FTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG----LYA---  560 (645)
Q Consensus       496 --------~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~----~~~---  560 (645)
                              .....||+.|+|||++.+..++.++||||+||+++||++|+.||...+.......+......    .+.   
T Consensus       167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (355)
T d2b1pa1         167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred             hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence                    23346899999999999999999999999999999999999999764322111111110000    000   


Q ss_pred             --------------cCchhHHhhhhccCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          561 --------------EGRIIEAADKRLNGAF---NEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       561 --------------~~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                                    ................   .......+.+++.+|++.||++|||++|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                          0001111111111111   1234567889999999999999999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.1e-39  Score=337.19  Aligned_cols=248  Identities=20%  Similarity=0.271  Sum_probs=188.8

Q ss_pred             cCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-CCCeeeeeeeeee--CCeEEEEEe
Q 041096          348 RGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-HKNLVQLLGWCAE--KGELLLVYE  424 (645)
Q Consensus       348 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~--~~~~~lV~E  424 (645)
                      ++|+..++||+|+||+||+|+...+++.||||+++..  ..+.+.+|+++|++++ ||||+++++++..  ....++|||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            5789999999999999999999999999999998753  3567899999999996 9999999999874  356999999


Q ss_pred             cCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCC-Ceeeecc--------
Q 041096          425 YMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANF-NARLESS--------  495 (645)
Q Consensus       425 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~-~~kl~d~--------  495 (645)
                      |+.+++|..+..       .++..++..++.||+.||+|||+   ++|+||||||+||||+.++ ..|+.|.        
T Consensus       113 ~~~~~~L~~~~~-------~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         113 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             CCCSCBGGGTTT-------SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             ecCCCcHHHHhc-------CCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccC
Confidence            999999977642       28999999999999999999999   9999999999999999765 4788772        


Q ss_pred             ---ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHh------hhc---cC
Q 041096          496 ---FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWG------LYA---EG  562 (645)
Q Consensus       496 ---~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~------~~~---~~  562 (645)
                         .....||+.|+|||.+.+. .++.++||||+||+++||++|+.||............+.....      ...   ..
T Consensus       183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence               2334689999999998765 4799999999999999999999999764332111111100000      000   00


Q ss_pred             ---chhHHh--------hhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 041096          563 ---RIIEAA--------DKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ  607 (645)
Q Consensus       563 ---~~~~~~--------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~  607 (645)
                         ......        ...............+.+++..|++.||++|||++|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               000000        000000111122345778899999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-39  Score=338.84  Aligned_cols=263  Identities=18%  Similarity=0.228  Sum_probs=197.4

Q ss_pred             hcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCc---chhHhHHHHHHHHhhcCCCCeeeeeeeeeeC-----Ce
Q 041096          347 TRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSH---EGKTEFLAELSIIACLRHKNLVQLLGWCAEK-----GE  418 (645)
Q Consensus       347 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~  418 (645)
                      .++|+..++||+|+||+||+|....+++.||||++....   ...+.+.+|+++|++++|||+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            457999999999999999999999899999999987633   3345788999999999999999999998633     34


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCeeeecc---
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNARLESS---  495 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~kl~d~---  495 (645)
                      .++++||+.+|+|.+++..+     .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++..|+.|.   
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~-----~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             eEEEEEeecCCchhhhcccc-----cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchh
Confidence            46677788899999999643     29999999999999999999999   99999999999999999999999772   


Q ss_pred             ------ccccccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccccccchhhHHHHHHhh----hc--cC
Q 041096          496 ------FTLTAGTMGYLAPEYLQYG-TATEKTDVFSYGVVVLEVACGRRPIERETEGHKMVNLVDWVWGL----YA--EG  562 (645)
Q Consensus       496 ------~~~~~gt~~y~APE~~~~~-~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~~~l~~~~~~~----~~--~~  562 (645)
                            .....||+.|+|||...+. .++.++||||+||++|||++|+.||...+.......+.......    ..  ..
T Consensus       169 ~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (348)
T d2gfsa1         169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS  248 (348)
T ss_dssp             -CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCC
T ss_pred             cccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccc
Confidence                  2234688999999987765 46899999999999999999999997654322211111110000    00  00


Q ss_pred             chhHHhhhhcc--CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHcCCCCCCC
Q 041096          563 RIIEAADKRLN--GAFN-----EDEMKRLLLVGLSCANPDSSARPSMRRVFQ--ILNNEAEPLV  617 (645)
Q Consensus       563 ~~~~~~d~~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~--~L~~~~~~~~  617 (645)
                      .........+.  ....     ......+.+++..|++.||++|||++|+++  .|++...+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~  312 (348)
T d2gfsa1         249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  312 (348)
T ss_dssp             HHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred             hhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCcc
Confidence            00000000000  0000     012345678899999999999999999998  5776544433

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-35  Score=309.66  Aligned_cols=259  Identities=18%  Similarity=0.199  Sum_probs=189.7

Q ss_pred             CCCcCceeccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcC-----------CCCeeeeeeeeeeC-
Q 041096          349 GFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLR-----------HKNLVQLLGWCAEK-  416 (645)
Q Consensus       349 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~-----------H~niv~l~g~~~~~-  416 (645)
                      +|+..++||+|+||+||+|+...+++.||||+++......+.+.+|+++++.++           |+||+++++++... 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            488999999999999999999999999999999876666677889999988875           57899999987653 


Q ss_pred             -CeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCC------
Q 041096          417 -GELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFN------  489 (645)
Q Consensus       417 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~------  489 (645)
                       ...+++++++..+.......... ....+++..+..++.||++||+|||+  ..+|+||||||+||||+.++.      
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             ccceeeeeeecccccccccccccc-cccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccce
Confidence             46677777766554433332222 23348899999999999999999997  378999999999999986653      


Q ss_pred             eeeec---------cccccccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccccccch---hhHHHHHHh
Q 041096          490 ARLES---------SFTLTAGTMGYLAPEYLQYGTATEKTDVFSYGVVVLEVACGRRPIERETEGHKM---VNLVDWVWG  557 (645)
Q Consensus       490 ~kl~d---------~~~~~~gt~~y~APE~~~~~~~t~ksDV~SfGvvl~El~tG~~P~~~~~~~~~~---~~l~~~~~~  557 (645)
                      .++.|         .....+||+.|+|||.+....++.++||||+||+++||++|+.||.........   ..+...++.
T Consensus       171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~  250 (362)
T d1q8ya_         171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  250 (362)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             eeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHH
Confidence            55655         223356899999999999999999999999999999999999999754322111   111111111


Q ss_pred             hhc-------cC----------------------chhHHhhhhccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-
Q 041096          558 LYA-------EG----------------------RIIEAADKRLNGAFNEDEMKRLLLVGLSCANPDSSARPSMRRVFQ-  607 (645)
Q Consensus       558 ~~~-------~~----------------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~~vl~-  607 (645)
                      +-.       ..                      ...+...  ............+.+++..|++.||.+|||++|+++ 
T Consensus       251 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT--EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH--HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcc--cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000       00                      0000111  122345677888999999999999999999999998 


Q ss_pred             -HHcCC
Q 041096          608 -ILNNE  612 (645)
Q Consensus       608 -~L~~~  612 (645)
                       .|++.
T Consensus       329 p~f~~~  334 (362)
T d1q8ya_         329 PWLKDT  334 (362)
T ss_dssp             GGGTTC
T ss_pred             cccCCC
Confidence             36644

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.96  E-value=4.9e-30  Score=249.55  Aligned_cols=114  Identities=36%  Similarity=0.478  Sum_probs=105.9

Q ss_pred             CcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccccCCCccccccCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcce
Q 041096          134 NKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKTADPILQGIDLKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPL  213 (645)
Q Consensus       134 ~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~  213 (645)
                      |++|||||||++|.+++||++||||||+|++.|.++.++     ++.+|+.++|||+||+.+++|+|++++.  ++..|+
T Consensus         2 n~ivAVEFDT~~N~~~~Dp~~nHIgIdvns~~S~~~~~~-----~l~~G~~~~v~I~Yd~~~~~L~V~~~~~--~~~~~~   74 (237)
T d1nlsa_           2 DTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW-----NMQNGKVGTAHIIYNSVDKRLSAVVSYP--NADSAT   74 (237)
T ss_dssp             CCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC-----CCCTTCEEEEEEEEETTTTEEEEEEECT--TSCCEE
T ss_pred             CCEEEEEEECCcCCCCCCCCCCEEEEEeCCCCccceecc-----cccCCCEEEEEEEEecCCcEEEEEEecC--CCCCeE
Confidence            689999999999998889999999999999999877664     6889999999999999999999999864  567889


Q ss_pred             EEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeeecC
Q 041096          214 LKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQTSG  254 (645)
Q Consensus       214 l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~~~  254 (645)
                      +++.|||+.+|+++||||||||||...|.|+|++|+|++..
T Consensus        75 ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~  115 (237)
T d1nlsa_          75 VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             EEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             EEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEeec
Confidence            99999999999999999999999999999999999999863

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2e-27  Score=234.00  Aligned_cols=204  Identities=16%  Similarity=0.087  Sum_probs=143.5

Q ss_pred             eeEEeCCCC-----CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCC
Q 041096           25 MNFDFTSFN-----LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPS   99 (645)
Q Consensus        25 ~~f~~~~f~-----~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   99 (645)
                      .+|+.|.+.     ..++.+.|+|.+.++.|+||++   .++++|+++|++|+++-        +|+|+|+|.+.... .
T Consensus         9 ~sf~~P~~~~~~~~~~~w~~~G~a~i~~~~i~LT~~---~~~~~G~v~~~~p~~~~--------~F~~~f~f~~~~~~-~   76 (228)
T d1gv9a_           9 YSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPS---LKSQRGSVWTKTKAAFE--------NWEVEVTFRVTGRG-R   76 (228)
T ss_dssp             GCEECSSCSCTTSCBTTEEEEETCEECSSCEEEECS---STTCEEEEEESSCBCCS--------SEEEEEEEEEECSS-S
T ss_pred             eccCCCcccCCCCCccceEEeeeEEEECCEEEECCC---CCCCEEEEEeCCCcccc--------CcEEEEEEeccCCC-C
Confidence            456656543     2468999999999999999997   56799999999999873        69999999998654 5


Q ss_pred             CCCCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCccccc-cc------CC
Q 041096          100 SFGDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIK-TA------DP  172 (645)
Q Consensus       100 ~~g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~-~~------~~  172 (645)
                      .+||||||+|+|...   ..|+.+|.     .+..+.+||||||+.|.+  +++.+|+.+++|...... ..      ..
T Consensus        77 ~ggdG~aF~i~~~~~---~~g~~~G~-----~~~~~glaVefDt~~n~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  146 (228)
T d1gv9a_          77 IGADGLAIWYTENQG---LDGPVFGS-----ADMWNGVGIFFDSFDNDG--KKNNPAIVVVGNNGQINYDHQNDGATQAL  146 (228)
T ss_dssp             CCCCEEEEEEESSCC---CEEEETTE-----CSCCEEEEEEEECCCC-------CCEEEEEEEESCCCCCHHHHHHHHCS
T ss_pred             CCCCEEEEEEecCCC---CCCCccCc-----CCCCceEEEEEEcccccC--CCCCCcEEEEecCCcceeeecCCCccccc
Confidence            679999999998753   35666665     334567999999999964  777788888776433111 00      01


Q ss_pred             Cccccc-cCCCCeEEEEEEecCCCceEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeee
Q 041096          173 ILQGID-LKSGNVITAWIDYKNDLRMLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQ  251 (645)
Q Consensus       173 ~~~~~~-~~~g~~~~~~I~Y~~~~~~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~  251 (645)
                      ...... ...+..+++||+|+  .+.|+|++.........+...........+++++||||||+||...+.|.|++|.+.
T Consensus       147 ~~~~~~~~~~~~~~~i~~~~~--~~~l~v~i~~~~~~~~~~~~~~~~~~~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~~  224 (228)
T d1gv9a_         147 ASCQRDFRNKPYPVRAKITYY--QKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTF  224 (228)
T ss_dssp             EEECCCCBSCSSCEEEEEEEE--TTEEEEEEECSSCCCTTCCEEEEEETTCCCCSSBEEEEEEECCSSCCEEEEEEEEEE
T ss_pred             cceeeeecCCceEEEEEEEec--CCEEEEEEeccccCCCcceeEEEEecccccCCCEEEEEEEeCCCCcCeEEEEEEEEE
Confidence            000111 12345567777776  588999998554333333333333346678999999999999999999999999875


Q ss_pred             e
Q 041096          252 T  252 (645)
Q Consensus       252 ~  252 (645)
                      .
T Consensus       225 ~  225 (228)
T d1gv9a_         225 Q  225 (228)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.90  E-value=4.2e-24  Score=207.38  Aligned_cols=107  Identities=34%  Similarity=0.571  Sum_probs=92.4

Q ss_pred             CCceeEEeCCCC--CCCeEEecceEe-eCCcEEccCCCCC---CCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEee
Q 041096           22 SNNMNFDFTSFN--LRNITLLGDSYL-RNGVIGLTRELGV---PASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINN   95 (645)
Q Consensus        22 ~~~~~f~~~~f~--~~~~~l~G~a~~-~~~~~~Lt~~~~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~   95 (645)
                      ++.++|+|++|+  ..||+|+|||.+ .+|.|+||+.+.+   ...++|||+|++||+|||+ +++++||+|+|+|.|.+
T Consensus       123 sn~~~F~f~~F~~~~~nl~l~G~A~i~~~G~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~d~-t~~~~SFsT~F~F~I~~  201 (237)
T d1nlsa_         123 TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKS  201 (237)
T ss_dssp             EEEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCC
T ss_pred             cccceEEeeecCCCCCCEEEeeeeEecCCCcEEecCCCCCCcccCcceEEEEeCCCEEEECC-CCcEeeEEEEEEEEEec
Confidence            456999999997  679999999998 5899999986432   3578999999999999996 88999999999999988


Q ss_pred             CCCCCCCCceEEEEecCCC--CCCCCCCccccccCCC
Q 041096           96 VNPSSFGDGLAFFISPDNQ--ILGSAGGCLGLVNSSQ  130 (645)
Q Consensus        96 ~~~~~~g~G~aF~l~p~~~--~~~~~g~~lGl~~~~~  130 (645)
                      .+ ..+||||||||+|...  +.++.|+||||||.++
T Consensus       202 ~~-~~~gdG~aF~iap~~~~~p~~~~g~~LGL~n~~n  237 (237)
T d1nlsa_         202 PD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN  237 (237)
T ss_dssp             SS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSCC
T ss_pred             CC-CCCCCCEEEEEeCCCCCCCCCCCCCeeeeccCCC
Confidence            65 5689999999999765  4588999999998753

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=3.4e-20  Score=180.25  Aligned_cols=192  Identities=16%  Similarity=0.108  Sum_probs=128.6

Q ss_pred             EEeCCCC-----CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCC
Q 041096           27 FDFTSFN-----LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSF  101 (645)
Q Consensus        27 f~~~~f~-----~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  101 (645)
                      |++|.+-     ..++.+.|+|.+.++.|+||++    .++.|.+|++.|+++++       +|+++|.|+|.... ..+
T Consensus        10 ~s~p~~~~~~~~~~~W~~~g~a~~~~~~i~LTp~----~~~~G~~w~~~~i~~~~-------~f~~~~~F~i~g~~-~~g   77 (221)
T d2a6za1          10 YSLPDLINTRKVPNNWQTGEQASLEEGRIVLTSN----QNSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYS-GQT   77 (221)
T ss_dssp             GCBCCCTTCCSCCTTEEEEETCEEETTEEESCCS----TTCEEEEEESSCEECCS-------CEEEEEEEEEESCC-SCC
T ss_pred             ccCCCccccccCCCccEEcceeEEECCEEEECCC----CCCceEEEECCccccCC-------CeEEEEEEEEeCCC-CCC
Confidence            6777652     4689999999999999999985    35789999999999975       49999999998654 567


Q ss_pred             CCceEEEEecCCCCCCCCCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccccc----cCCCcccc
Q 041096          102 GDGLAFFISPDNQILGSAGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESIKT----ADPILQGI  177 (645)
Q Consensus       102 g~G~aF~l~p~~~~~~~~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~~~----~~~~~~~~  177 (645)
                      ||||||++++... .+..|+.+|.     .+...-+||||||+.|..    ...|+.++-++..-...    ........
T Consensus        78 gdG~af~~~~~~~-~~~~g~~~G~-----~~~~~GlaV~fDt~~n~~----~~~~~~~ndgt~~~~~~~~~~~~~~~~~~  147 (221)
T d2a6za1          78 DGGISFWFVQDSN-IPRDKQLYNG-----PVNYDGLQLLVDNNGPLG----PTLRGQLNDGQKPVDKTKIYDQSFASCLM  147 (221)
T ss_dssp             SCEEEEEEEECSS-SCCCCTBTTB-----CTTCEEEEEEEESCSTTS----SEEEEEEEESSSCCCGGGHHHHCSEEEEC
T ss_pred             CCcEEEEEEcCCC-cccccccccc-----CCCCceEEEEEECCCCCC----CceEEEecCCCccccccCCcccccceeee
Confidence            9999999997543 2334555555     233566999999998732    12233333333221111    11111112


Q ss_pred             c-cCCCCeEEEEEEecCCCce-EEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeee
Q 041096          178 D-LKSGNVITAWIDYKNDLRM-LKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSW  248 (645)
Q Consensus       178 ~-~~~g~~~~~~I~Y~~~~~~-l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw  248 (645)
                      . ..++...+++|.|+..++. |.|.+..      ..++.  ++--.+-++++|+||||+||...+.|.+..+
T Consensus       148 ~~~~~~~~~~~~I~y~~~~~~~l~v~id~------~~c~~--~~~v~lp~~~~~fG~SA~TG~~~~~hd~~~i  212 (221)
T d2a6za1         148 GYQDSSVPSTIRVTYDLEDDNLLKVQVDN------KVCFQ--TRKVRFPSGSYRIGVTAQNGAVNNNAESFEI  212 (221)
T ss_dssp             CCTTEEEEEEEEEEEEGGGTSEEEEEETT------EEEEE--ESCCCCCSSEEEEEEEEECCSGGGCCCEEEE
T ss_pred             cccCCCCCEEEEEEEecCccceEEEEecC------cEeEE--ECCeecCCCCEEEEEEEccCCccCCCceEEE
Confidence            2 2356678999999866544 7777731      11222  2222233567899999999999998886554

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=1.6e-19  Score=174.74  Aligned_cols=186  Identities=19%  Similarity=0.156  Sum_probs=128.4

Q ss_pred             CCCeEEecceEeeCCcEEccCCCCCCCCceEEEEeCCCcccccCCCCceeeEEEEEEEEEeeCCCCCCCCceEEEEecCC
Q 041096           34 LRNITLLGDSYLRNGVIGLTRELGVPASSSGSLIYNNPVPFFDQETNTTASFTSRFSFSINNVNPSSFGDGLAFFISPDN  113 (645)
Q Consensus        34 ~~~~~l~G~a~~~~~~~~Lt~~~~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~l~p~~  113 (645)
                      ..++.+.|+|.+.++.|+||++    .++.|++|++.|+++++       +|+++|+|+|.... ..+||||||.+++..
T Consensus        21 ~~~W~~~G~~~~~~~~i~LTp~----~~~~G~~w~~~~i~~~~-------~f~i~~~F~i~g~~-~~~~dG~afw~~~~~   88 (218)
T d2a6va1          21 LSQWTLGDKVKLEEGRFVLTPG----KNTKGSLWLKPEYSIKD-------AMTIEWTFRSFGFR-GSTKGGLAFWLKQGN   88 (218)
T ss_dssp             TTTEEEEETCEEETTEEESCCS----TTCEEEEEESSCBCCSS-------CEEEEEEEEEESCC-SCCSCEEEEEEECSC
T ss_pred             cCccEECCCEEEECCEEEECCC----CCCeeEEEeCCcccccc-------cceEEEEEEEeCCC-CCCCCcEEEEEEcCC
Confidence            4789999999999999999986    24689999999999875       49999999998654 567999999999755


Q ss_pred             CCCCC--CCCccccccCCCCCCCcEEEEEeeCCCCCCCCCCCCCeeeeecCCcccc-ccc-CCCccc--c-ccCCCCeEE
Q 041096          114 QILGS--AGGCLGLVNSSQLTKNKFVAIEFDTRLDPHFDDPDENHIGLDIDSLESI-KTA-DPILQG--I-DLKSGNVIT  186 (645)
Q Consensus       114 ~~~~~--~g~~lGl~~~~~~~~~~~vAVEFDt~~n~~~~d~~~~Hvgi~vns~~s~-~~~-~~~~~~--~-~~~~g~~~~  186 (645)
                      ...+.  .+|..+.+        .-+||||||+.|.      .+||.+.+|.-... ... ......  . ...++...+
T Consensus        89 ~~~~~~~~~G~~~~f--------~GlaV~fDt~~n~------~~~i~~~~ndGs~~~~~~~d~~~g~c~~~~~~~~~~~~  154 (218)
T d2a6va1          89 EGDSTELFGGSSKKF--------NGLMILLRLDDKL------GESVTAYLNDGTKDLDIESSPYFASCLFQYQDSMVPST  154 (218)
T ss_dssp             CCCCCTBTTTBCSSC--------EEEEEEEEEETTT------EEEEEEEEEESSSCCCTTTSCCSEEEECCCSSCSSCEE
T ss_pred             cccCCCcccccCCCc--------ceEEEEEECCCCC------CCeEEEEeCCCCccccccCCcccceEEecccCCCCcEE
Confidence            43221  22323322        3489999998773      36888877642211 000 101111  1 134567788


Q ss_pred             EEEEecCCCc-eEEEEEEeCCCCCCcceEEEeecCCccCCCccEEeEEeccCCccceeeeeeeeeee
Q 041096          187 AWIDYKNDLR-MLKVFMSYSNLKPVTPLLKVNIDLSGYLKGNMYVGFSASTEGSTELHMIQSWSFQT  252 (645)
Q Consensus       187 ~~I~Y~~~~~-~l~v~~~~~~~~~~~~~l~~~vdl~~~l~~~~~vGfsastg~~~~~~~i~sw~f~~  252 (645)
                      ++|.|+.... .++|.+.  .    ..|+. ..++.-..++++|+||||+||...+.|.|++|++-.
T Consensus       155 ~~i~Y~~~~~~~l~v~id--~----~~c~~-t~~i~lp~~~~~yfG~SA~Tg~~~d~~dIls~~~~~  214 (218)
T d2a6va1         155 LRLTYNPLDNHLLKLQMD--N----RVCFQ-TRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYD  214 (218)
T ss_dssp             EEEEEEGGGTSEEEEEET--T----EEEEE-ESCCCGGGTSCBEEEEEEECCTTCCEEEEEEEEEES
T ss_pred             EEEEEECcccceEEEEeC--C----cEEEE-ECCeecCCCCcEEEEEEECCCCCcCcEEEEEEEEEe
Confidence            9999976554 4666653  1    22332 222333345679999999999999999999999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.80  E-value=5.6e-20  Score=175.01  Aligned_cols=158  Identities=14%  Similarity=0.136  Sum_probs=113.3

Q ss_pred             CcCceeccCCceEEEEEEECCCCeEEEEEeccCCcc-------------------hhHhHHHHHHHHhhcCCCCeeeeee
Q 041096          351 HSNRILGRGAFGNVYKAYFASSGSVAAVKRSKHSHE-------------------GKTEFLAELSIIACLRHKNLVQLLG  411 (645)
Q Consensus       351 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~~~~-------------------~~~~~~~Ei~~l~~l~H~niv~l~g  411 (645)
                      ...++||+|+||+||+|... +|..||||+++....                   .......|...+.++.|.+++..++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            34688999999999999986 488999997653110                   1233456888899999999998876


Q ss_pred             eeeeCCeEEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEcCCCCee
Q 041096          412 WCAEKGELLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQECEQQVIHRDIKASNIMLDANFNAR  491 (645)
Q Consensus       412 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIlld~~~~~k  491 (645)
                      +..    .+++|||+++..+.+           ++......++.|++++|+|||+   .+|+||||||+|||+++++ ++
T Consensus        82 ~~~----~~lvme~~~~~~~~~-----------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~~-~~  142 (191)
T d1zara2          82 WEG----NAVLMELIDAKELYR-----------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEEG-IW  142 (191)
T ss_dssp             EET----TEEEEECCCCEEGGG-----------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETTE-EE
T ss_pred             ecC----CEEEEEeeccccccc-----------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCCC-EE
Confidence            542    279999998765432           3334456789999999999999   9999999999999999654 77


Q ss_pred             eeccccccccCCcccCccccc----------CCCCCcchhHHHHHHHH
Q 041096          492 LESSFTLTAGTMGYLAPEYLQ----------YGTATEKTDVFSYGVVV  529 (645)
Q Consensus       492 l~d~~~~~~gt~~y~APE~~~----------~~~~t~ksDV~SfGvvl  529 (645)
                      +.|. +....+....+.+++.          .++|..++||||..--+
T Consensus       143 liDF-G~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         143 IIDF-PQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ECCC-TTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             EEEC-CCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            7763 3322222223333321          24578889999975433

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.15  E-value=4.2e-06  Score=81.13  Aligned_cols=143  Identities=14%  Similarity=0.079  Sum_probs=96.0

Q ss_pred             HHHHHHhcCCCcCceeccCCceEEEEEEECCCCeEEEEEeccC-CcchhHhHHHHHHHHhhcC-CCCeeeeeeeeeeCCe
Q 041096          341 RELRSATRGFHSNRILGRGAFGNVYKAYFASSGSVAAVKRSKH-SHEGKTEFLAELSIIACLR-HKNLVQLLGWCAEKGE  418 (645)
Q Consensus       341 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~-~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~  418 (645)
                      .|+++....|+..+..+-++.+.||+....  +..+++|+... .......+.+|...+..+. +--+.+++.++.+.+.
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~~--~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~   84 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEeC--CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCc
Confidence            467777777876665444445789988643  55667887654 2333456788998888774 4446777888888889


Q ss_pred             EEEEEecCCCCCHhHHhhhcCCCCccCCHHHHHHHHHHHHHHHHHHhhcC------------------------------
Q 041096          419 LLLVYEYMPNGSLDRMLYQDSENGVLLSWYHRLNIVVGLASALTYLHQEC------------------------------  468 (645)
Q Consensus       419 ~~lV~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------  468 (645)
                      .++||+++++.++.+......         +...++.++++.|+.||+..                              
T Consensus        85 ~~lv~~~l~G~~~~~~~~~~~---------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (263)
T d1j7la_          85 SNLLMSEADGVLCSEEYEDEQ---------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC  155 (263)
T ss_dssp             EEEEEECCSSEEHHHHTTTCS---------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCG
T ss_pred             eEEEEEecccccccccccccc---------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhh
Confidence            999999999988866543211         12234555566666666420                              


Q ss_pred             --------------------------CCCeeeCCCCCCcEEEcCCCCeeeec
Q 041096          469 --------------------------EQQVIHRDIKASNIMLDANFNARLES  494 (645)
Q Consensus       469 --------------------------~~~ivHrDlkp~NIlld~~~~~kl~d  494 (645)
                                                ...++|+|+.|.|||++++...-+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lID  207 (263)
T d1j7la_         156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFID  207 (263)
T ss_dssp             GGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECC
T ss_pred             hcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEee
Confidence                                      12368999999999999765555655

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.27  E-value=0.0002  Score=68.41  Aligned_cols=75  Identities=19%  Similarity=0.148  Sum_probs=52.5

Q ss_pred             eeccCCc-eEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCC--CCeeeeeeeeeeCCeEEEEEecCCCCCH
Q 041096          355 ILGRGAF-GNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRH--KNLVQLLGWCAEKGELLLVYEYMPNGSL  431 (645)
Q Consensus       355 ~lG~G~f-g~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~gsL  431 (645)
                      .+..|.. +.||+..... +..+++|......  ...+..|...++.+..  -.+.++++++.+.+..++|||++++.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~-~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG-RPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT-SCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCC-CCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3444543 6799988754 6667888765432  3457788888887743  3356678888888889999999987665


Q ss_pred             h
Q 041096          432 D  432 (645)
Q Consensus       432 ~  432 (645)
                      .
T Consensus        94 ~   94 (255)
T d1nd4a_          94 L   94 (255)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.05  E-value=0.0012  Score=67.52  Aligned_cols=75  Identities=13%  Similarity=0.076  Sum_probs=46.8

Q ss_pred             ceeccCCceEEEEEEECCCCeEEEEEeccC----Cc----chhHhHHHHHHHHhhcC-C--CCeeeeeeeeeeCCeEEEE
Q 041096          354 RILGRGAFGNVYKAYFASSGSVAAVKRSKH----SH----EGKTEFLAELSIIACLR-H--KNLVQLLGWCAEKGELLLV  422 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~~~~vavK~~~~----~~----~~~~~~~~Ei~~l~~l~-H--~niv~l~g~~~~~~~~~lV  422 (645)
                      +.||.|..-.||+.....++..++||....    ..    ........|.+.|+.+. +  ..+.+++.+.  .+..++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEEE
Confidence            458999999999999877778889995432    11    12233456777777663 2  3455666554  3455889


Q ss_pred             EecCCCCC
Q 041096          423 YEYMPNGS  430 (645)
Q Consensus       423 ~Ey~~~gs  430 (645)
                      ||++.+..
T Consensus       110 mE~L~~~~  117 (392)
T d2pula1         110 MEDLSHLK  117 (392)
T ss_dssp             ECCCTTSE
T ss_pred             EeccCCcc
Confidence            99997654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.037  Score=54.29  Aligned_cols=68  Identities=15%  Similarity=0.097  Sum_probs=46.6

Q ss_pred             eEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-----eeee--eeeeeCCeEEEEEecCCCCC
Q 041096          362 GNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-----VQLL--GWCAEKGELLLVYEYMPNGS  430 (645)
Q Consensus       362 g~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-----v~l~--g~~~~~~~~~lV~Ey~~~gs  430 (645)
                      =.||+.+..+ |..+++|.........+++..|...+..|....+     +..-  ......+..+.++++++|..
T Consensus        36 N~vy~v~~~d-g~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDED-RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTT-CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCC-CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            3799998854 7788999987665566778899998888853222     1111  12234567889999997643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.90  E-value=0.11  Score=52.06  Aligned_cols=73  Identities=18%  Similarity=0.255  Sum_probs=49.2

Q ss_pred             ceeccCCceEEEEEEECCC-------CeEEEEEeccCCcchhHhHHHHHHHHhhcCCCCe-eeeeeeeeeCCeEEEEEec
Q 041096          354 RILGRGAFGNVYKAYFASS-------GSVAAVKRSKHSHEGKTEFLAELSIIACLRHKNL-VQLLGWCAEKGELLLVYEY  425 (645)
Q Consensus       354 ~~lG~G~fg~Vy~g~~~~~-------~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey  425 (645)
                      +.|+.|-.=.+|+....+.       ...+++++.... .......+|..+++.+.-.++ .++++++.+    .+|+||
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ef  122 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY  122 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEE
Confidence            4577777788999987542       345677766532 233456688888888853344 477777754    589999


Q ss_pred             CCCCCH
Q 041096          426 MPNGSL  431 (645)
Q Consensus       426 ~~~gsL  431 (645)
                      +++.+|
T Consensus       123 i~g~~l  128 (395)
T d1nw1a_         123 IPSRPL  128 (395)
T ss_dssp             CCEEEC
T ss_pred             eccccC
Confidence            987544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.00  E-value=0.43  Score=45.69  Aligned_cols=89  Identities=11%  Similarity=0.101  Sum_probs=50.7

Q ss_pred             cCHHHHHHHhcCCCcCcee-----ccCCceEEEEEEECCCCeEEEEEeccCCcchhHhHHHHHHHHhhcCCCC-----ee
Q 041096          338 FSYRELRSATRGFHSNRIL-----GRGAFGNVYKAYFASSGSVAAVKRSKHSHEGKTEFLAELSIIACLRHKN-----LV  407 (645)
Q Consensus       338 ~~~~~l~~~~~~f~~~~~l-----G~G~fg~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~Ei~~l~~l~H~n-----iv  407 (645)
                      .+.+|+.....+|...++.     ..|--=+.|+.+..+ | .+++|+.... ...++...|++++..|.+.+     .+
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC-C-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccc
Confidence            4678888888889775543     345456789988764 3 4788987542 23445566777777774322     21


Q ss_pred             eee-e--eeeeCCeEEEEEecCCCC
Q 041096          408 QLL-G--WCAEKGELLLVYEYMPNG  429 (645)
Q Consensus       408 ~l~-g--~~~~~~~~~lV~Ey~~~g  429 (645)
                      ... |  +.........++.++.+.
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~  104 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGM  104 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCB
T ss_pred             eecCCCcceeeecccceeeeecccc
Confidence            111 1  112234567777777654