BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041101
(433 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 244/452 (53%), Gaps = 56/452 (12%)
Query: 1 MRDLEKAVEWLRPFVDSKAWDYCVVWKLGDDPSRFIEWLGCCCSGGVGGGFEYVKVKEE- 59
MR E+ E+LRPFVDS+ WD CV+WKLGDDPSRFIEW+GCCCSG ++ EE
Sbjct: 4 MRGGERVKEFLRPFVDSRTWDLCVIWKLGDDPSRFIEWVGCCCSGCYIDKNIKLENSEEG 63
Query: 60 -SGEEQKFSFCRDAHLKHSARTKACEALAQLPSFMDLYSGIHGEVVITNQPKWISLANSS 118
+G ++K SFCRD H KH RT ACEAL++ P FM LY GIHGEVV++ PKW L NS
Sbjct: 64 GTGRKKKASFCRDDHNKHRIRTLACEALSRFPLFMPLYPGIHGEVVMSKSPKW--LVNSG 121
Query: 119 DSIASHQSNSTRVLIPVFGGLIELFAAKHISKDQNIIELVLAHCNTSIEQ--------RV 170
+ + STRVL+PV GL+ELFA D++++ L+++ C T E R+
Sbjct: 122 SKM---EMFSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMSRCTTFFEPFPEQRLQFRI 178
Query: 171 VP-AGSSYDVGLDEKCLDILLKENLQNFPSPLQLLTFVPGTQVLSAATRFNTHPYNEGSS 229
+P A S G++ L P + T
Sbjct: 179 IPRAEESMSSGVNLSVEGGGSSSVSNPSSETQNLFGNYPNASCVEILREEQT-------- 230
Query: 230 RGSNPSIEHPSFDSNYGYIAQNA------PLMQPIGNSFAKRPKAKNLITERNRRNKLKD 283
P + + + QNA + P N K+KNL +ER RR ++
Sbjct: 231 ----PCL---IMNKEKDVVVQNANDSKANKKLLPTENF-----KSKNLHSERKRRERINQ 278
Query: 284 GLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKE-NE-DCEKDNEEMKSF 341
++ LRA+VPKI+K+++ I DA +YI ELL E KL+DELK NE +C++ E +S
Sbjct: 279 AMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAAEEQSA 338
Query: 342 KLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQINDRDFLIKLLCEHERGGFL 401
D E S S+ NK K+EV++EV++ +RDFLI+++ EH++ GF
Sbjct: 339 IADPEAERVS------SKSNKRVK------KNEVKIEVHETGERDFLIRVVQEHKQDGFK 386
Query: 402 RLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
RL+EA++ EL++ID N T + V+ +L V+
Sbjct: 387 RLIEAVDLCELEIIDVNFTRLDLTVMTVLNVK 418
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 265/497 (53%), Gaps = 80/497 (16%)
Query: 3 DLEKAVEWLRPFVDSKAWDYCVVWKLGDDPSRFIEWLGCCCSGGVGGGFEYVKVKEESGE 62
+++ +E LRP V ++AWDYCV+W+L +D RF++W+GCCC GG E + E E
Sbjct: 4 NMQNLLEKLRPLVGARAWDYCVLWRLNED-QRFVKWMGCCC-----GGTELIA--ENGTE 55
Query: 63 EQKFSFCRDAHLKHSARTKACEALAQLPSFMDLYSGIHGEVVITNQPKWISLANSSDSIA 122
E + CRD H RTK+CE L+ LP+ + L SGI+ E ++TNQ W+S SS+
Sbjct: 56 EFSYGGCRDVMFHH-PRTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWLS--ESSEPSF 112
Query: 123 SHQSNSTRVLIPVFGGLIELFAAKHISKDQNIIELVLAHCN------TSIEQRVVPAGSS 176
++ TRVLIP+ GGL+ELFA +H+++DQN+++ V+ HCN +I V S
Sbjct: 113 MQETICTRVLIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMDDSVTINMMVADEVES 172
Query: 177 YDVGLDEKCLDILLK----ENLQNFPSPLQL------LTFVPG-----TQVLSAATRFN- 220
G+ DI K E++ N PS + L F+P TQ L + ++
Sbjct: 173 KPYGM--LSGDIQQKGSKEEDMMNLPSSYDISADQIRLNFLPQMSDYETQHLKMKSDYHH 230
Query: 221 ----------------THPYNEGSSRGSNPSIEHPSFDSNYGYIAQNAPLMQ----PIGN 260
+P+N G P I PS N + + + + G+
Sbjct: 231 QALGYLPENGNKEMMGMNPFNTVEEDGI-PVIGEPSLLVNEQQVVNDKDMNENGRVDSGS 289
Query: 261 SFAKR----------------PKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAIL 304
+ + +AKNL+ ER RR KL D L+ALR+LVP+I+K+DRA+IL
Sbjct: 290 DCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASIL 349
Query: 305 GDAAEYIKELLQEVDKLQDELKENEDCEK-DNEEMKSFKLD-----EIHEGTS-TTYLPA 357
GDA Y+KEL E +LQDEL+EN + E N L+ H G S + +P+
Sbjct: 350 GDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPS 409
Query: 358 SEHNKSFPACGEKGKS-EVRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVID 416
+ + +KG+ E +V+V Q++ R+F +K++CE++ GGF RLMEA++SL L+V +
Sbjct: 410 VKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTN 469
Query: 417 ANVTTFNGKVLNILRVQ 433
AN T + V N+ +V+
Sbjct: 470 ANTTRYLSLVSNVFKVE 486
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 22/173 (12%)
Query: 268 AKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
AKNL+ ER RR KL D L+ LR++VPKISKMDRA+ILGDA +Y+KELLQ ++ L EL+
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 328 NEDCEKD------NEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRV-EVN 380
+ S+++ E E ++ LP+ + G++ + EVR+ E
Sbjct: 326 TPPSSSSLHPLTPTPQTLSYRVKE--ELCPSSSLPSPK--------GQQPRVEVRLREGK 375
Query: 381 QINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
+N I + C G L M A+++L L V A ++ FNG L++ R +
Sbjct: 376 AVN-----IHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAE 423
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 268 AKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
AKNL+ ER RR KL D L+ LR++VPKISKMDRA+ILGDA +Y+KELLQ ++ L +EL
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL-- 363
Query: 328 NEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEH--NKSFPACGEKGKSEVRVEVNQINDR 385
E + S + T E S P+ KG+ + RVEV R
Sbjct: 364 -ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPS--PKGQ-QARVEVRLREGR 419
Query: 386 DFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
I + C G L M+A+++L L V A ++ FNG L++ R +
Sbjct: 420 AVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAE 467
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 37/201 (18%)
Query: 253 PLMQPIGNSF--------AKRPKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAIL 304
PL + I S+ A P +KN+++ERNRR KL LFALR++VP I+KMD+A+I+
Sbjct: 31 PLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASII 90
Query: 305 GDAAEYIKELLQEVDKLQDELKENEDCEKDNEE------------MKSFKLDEIHEGTST 352
DA YI+ L E KL+ E++E E K + + S K+ ++ G+ST
Sbjct: 91 KDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSST 150
Query: 353 TYLPASEHNKSFPACGEKGKSEVRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLEL 412
+ + E +F + +R ++ + C ++L E SL L
Sbjct: 151 SLIEVLELKVTF-----------------MGERTMVVSVTCNKRTDTMVKLCEVFESLNL 193
Query: 413 QVIDANVTTFNGKVLNILRVQ 433
+++ +N+T+F+G + + + ++
Sbjct: 194 KILTSNLTSFSGMIFHTVFIE 214
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 19/163 (11%)
Query: 270 NLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENE 329
++I ER RR KL AL ALVP + KMD+A++LGDA ++IK L + V +L+++ KE
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKER- 211
Query: 330 DCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEV---RVEVNQINDRD 386
++S L + L ++N+SF + E G S++ +EV + +D D
Sbjct: 212 -------RLESMVL------VKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEV-RFSDED 257
Query: 387 FLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNI 429
LIK+LCE ++G ++M I L + + +++V F G L+I
Sbjct: 258 VLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 95/188 (50%), Gaps = 37/188 (19%)
Query: 268 AKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
+KN+++ERNRR KL LFALR++VP ISK+D+A+++ D+ +Y++EL+ + L+ E++E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 328 NE-------------DCE---------KDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFP 365
E DC DN +M+S K ++ T + P
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPI-------- 164
Query: 366 ACGEKGKSEVRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGK 425
+ ++V + ++ ++ + C +R ++L + + SL L ++ N ++F +
Sbjct: 165 -------EVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSR 217
Query: 426 VLNILRVQ 433
+ L +Q
Sbjct: 218 LSTTLFLQ 225
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 259 GNSFAKRPKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEV 318
G K +++ LI+ER RR ++KD L+ALR+LVP I+KMD+A+I+GDA Y++EL +
Sbjct: 121 GTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQA 180
Query: 319 DKLQDELKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKG-KSEVRV 377
KL+ ++ E G + P ++ + F K +++
Sbjct: 181 KKLKSDIAGLEASLN-------------STGGYQEHAPDAQKTQPFRGINPPASKKIIQM 227
Query: 378 EVNQINDRDFLIKLLCEHERGGFLRLMEAINSL-ELQVIDANVTT 421
+V Q+ ++ F ++L+C G L +++ SL QV ++N+++
Sbjct: 228 DVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSS 272
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELK 326
K+ NL ER RR KL L ALR+ VP ++ M +A+I+ DA YI EL V L +
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 327 ENEDC--EKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQIND 384
E E+ E D E+ E+ S+ N+ G E V++ +I +
Sbjct: 90 EMEEAPPEIDEEQTDPMIKPEVE---------TSDLNEEMKKLG----IEENVQLCKIGE 136
Query: 385 RDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
R F +K++ E G F + ME + L ++ID ++TT NG +L VQ
Sbjct: 137 RKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQ 185
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 268 AKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
+KNL+ ER RR +L D L LR++VPKISKMDR +ILGDA +Y+KELL +++KLQDE +E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 34/162 (20%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENEDCEK 333
ER RR KL ++LRA+VP +SKMD+A++LGDA YI EL KLQ E
Sbjct: 420 ERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKS---KLQ-------QAES 469
Query: 334 DNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGK-----------SEVRVEVN-Q 381
D EE++ KLD + S+ + CG + K S + +E++ +
Sbjct: 470 DKEEIQK-KLDGM-----------SKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVK 517
Query: 382 INDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFN 423
I D +I++ C + R MEA+ L+L+V A+++ N
Sbjct: 518 IIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVN 559
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 243 SNYGYIAQNAPLMQPIGNSFAKRPK-------AKNLITERNRRNKLKDGLFALRALVPKI 295
+NY + + + IG + KR +KNL+ ER RR +L D L LR++VPKI
Sbjct: 118 NNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKI 177
Query: 296 SKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
+KMDR +ILGDA +Y+KELL +++KLQ++ +E
Sbjct: 178 TKMDRTSILGDAIDYMKELLDKINKLQEDEQE 209
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 270 NLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENE 329
+++ ER RR KL AL AL+P + KMD+A++LGDA ++IK L + V + +++ KE
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 330 DCEKDNEEMKSFKLDEIHE--GTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQINDRDF 387
+ S LDE H+ +S++ + + + P EVRV + +D
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEI------EVRV-----SGKDV 235
Query: 388 LIKLLCEHERGGFLRLMEAINSLELQVIDANVTTF 422
LIK+LCE ++G +++M I L L + ++NV F
Sbjct: 236 LIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPF 270
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 137/353 (38%), Gaps = 70/353 (19%)
Query: 11 LRPFVDSKAWDYCVVWKLGDDPSRFIEWLGCCCSGGVGGGFEYVKVKE-ESGE------E 63
LR V+ WDY + W + S GC G G + +VK+ SGE E
Sbjct: 54 LRHVVEGSDWDYALFWLASNVNSSD----GCVLIWGDG----HCRVKKGASGEDYSQQDE 105
Query: 64 QKFSFCRDAHLKHSA-----RTKACEALAQLPSFM--DLYSGIHGEV--------VITNQ 108
K R HL R AL L F LY + ++ +
Sbjct: 106 IKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGK 165
Query: 109 PKW-------ISLANSSDSIASHQSNSTRVLIPVFGGLIELFAAKHISKDQNIIELVLAH 161
P W +S +A T + +PV G++EL + +HI +D+++IE+V
Sbjct: 166 PLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMV--- 222
Query: 162 CNTSIEQRVVPAGSSYDVGLDEKCLDILLKENLQNFPSPLQL---------LTFVPGTQV 212
+ V GS + + KE + F L L + F P T+
Sbjct: 223 -------KSVFGGSDF----------VQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTE- 264
Query: 213 LSAATRFNTHPYNEGSSRGSNPSIEHPSFDSNYGYIAQNAPLMQPIGNSFAKRPKAKNLI 272
T F+ Y + GSN + Y+ + R +A N +
Sbjct: 265 --DDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTDEQKPRKRGRKPANGREEALNHV 322
Query: 273 -TERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
ER RR KL +ALRA+VP ISKMD+A++L DA YI ++ +++ + E
Sbjct: 323 EAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENEDCEK 333
ER RR KL +ALRA+VP +SKMD+ ++L DA YI EL + EN + EK
Sbjct: 348 ERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKA--------ENVELEK 399
Query: 334 DNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACG--EKGKSEVRVEVNQINDRDFLIKL 391
E++ +L EI A + N C EK +++EV + D ++++
Sbjct: 400 HAIEIQFNELKEI----------AGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRV 449
Query: 392 LCEHERGGFLRLMEAINSLELQVIDANVTTFN 423
+ RLM A+ LEL+V A+++ N
Sbjct: 450 ESRKDHHPGARLMNALMDLELEVNHASISVMN 481
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENEDCEK 333
ER RR KL +ALRA+VP +SKMD+A++LGDA YI EL +V K E+E +
Sbjct: 457 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKT-----ESEKLQI 511
Query: 334 DNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQINDRDFLIKLLC 393
N +++ KL+ S + S S G + +EV +I D +I++
Sbjct: 512 KN-QLEEVKLELAGRKASASGGDMSSSCSSIKPVG------MEIEV-KIIGWDAMIRVES 563
Query: 394 EHERGGFLRLMEAINSLELQVIDANVTTFN 423
RLM A+ LEL+V A+++ N
Sbjct: 564 SKRNHPAARLMSALMDLELEVNHASMSVVN 593
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENEDCEK 333
E+ RR KL +ALRA+VPK+S+MD+A++L DA YI+ L ++D L+ E+K+ + E
Sbjct: 254 EKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTET 313
Query: 334 DNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQINDRDFLIKLLC 393
D KLD TS + + + K P+ +G S++ V+V +I + +I++
Sbjct: 314 D-------KLDNSSSNTSPSSVEYQVNQK--PSKSNRG-SDLEVQV-KIVGEEAIIRVQT 362
Query: 394 EHERGGFLRLMEAINSLELQVIDANVT 420
E+ LM A+ ++ +V AN +
Sbjct: 363 ENVNHPTSALMSALMEMDCRVQHANAS 389
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENEDCEK 333
ER RR KL ++LRA+VP +SKMD+A++LGDA YI EL ++ K E
Sbjct: 421 ERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQK----------AES 470
Query: 334 DNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVN-QINDRDFLIKLL 392
D EE++ ++D +++ A K ++ + +EV+ +I D +I++
Sbjct: 471 DKEELQK-QIDVMNKEAGN----AKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQ 525
Query: 393 CEHERGGFLRLMEAINSLELQVIDANVTTFN 423
C + MEA+ L+L+V A+++ N
Sbjct: 526 CSKRNHPGAKFMEALKELDLEVNHASLSVVN 556
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 274 ERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
ER RR KL +ALR++VP ISKMD+A++LGDA YIKEL ++V ++DE
Sbjct: 400 ERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 270 NLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENE 329
+++ ER RR KL + L AL AL+P + K D+A +L DA +++K+L + V KL++
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEE------ 186
Query: 330 DCEKDNEEMKSFKLDE--IHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVN------- 380
E + + K+D+ I S YL + S S EV+
Sbjct: 187 ------ERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMP 240
Query: 381 ----QINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNI 429
+++DRD LI++ CE +G ++++ ++ L+V+++ F L I
Sbjct: 241 MIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVI 293
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 252 APLMQPIGNSFAKRPK--AKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAE 309
PLM P+ + ++E+ RR KL + LR+++P ISK+D+ +IL D E
Sbjct: 386 VPLMNKKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIE 445
Query: 310 YIKELLQEVDKLQDELKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGE 369
Y+++L + V +L+ +E+ D E MK K D+ E S + S+ S GE
Sbjct: 446 YLQDLQKRVQELE-SCRESADTETRITMMKRKKPDDEEERASANCM-NSKRKGSDVNVGE 503
Query: 370 KGKSEVRVEVNQINDR------DFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFN 423
+++ N R + +I+L C G L +M+ I+ L L +T +
Sbjct: 504 DEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGD 563
Query: 424 G 424
G
Sbjct: 564 G 564
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 98 GIHGEVVITNQPKWISLANSSDS-------IASHQSNSTRVLIPVFGGLIELFAAKHISK 150
GI G + +P W+ A ++DS +A S T V P GG++E+ +HI +
Sbjct: 131 GIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKE 190
Query: 151 DQNIIELV 158
D N+I+ V
Sbjct: 191 DMNVIQSV 198
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 265 RPKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
R +++ ER RR KL + LR++VP ++KMD+ +ILGD Y+ L + V +L++
Sbjct: 359 REDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENT 418
Query: 325 LKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQIND 384
E + H+ T T C K EV V I +
Sbjct: 419 HHEQQ-----------------HKRTRT--------------CKRKTSEEVEV---SIIE 444
Query: 385 RDFLIKLLCEHERGGFLRLMEAINSLELQV 414
D L+++ CE+ G L +++ ++ L ++
Sbjct: 445 NDVLLEMRCEYRDGLLLDILQVLHELGIET 474
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 38/189 (20%)
Query: 11 LRPFVDSKAWDYCVVWKLGDDPSRFIEWLGCCCSGGVGGGFEYVKVKEESGEEQKFSFCR 70
L+ V S W Y V W+ R + W +G + + + E + EE R
Sbjct: 24 LKTAVQSVDWTYSVFWQFCPQ-QRVLVWGNGYYNGAIKTR-KTTQPAEVTAEEAALE--R 79
Query: 71 DAHLKH----------SARTKACEALA--QLPSFMDLY-----------SGIHGEVVITN 107
L+ ++ +AC AL+ L Y SG+ G+
Sbjct: 80 SQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARR 139
Query: 108 QPKWISLANSSDS-------IASHQSNSTRVLIPVFGGLIELFAAKHISKDQNIIELVLA 160
+ W+S AN DS +A T V IP+ G++EL K + +D +EL +
Sbjct: 140 KHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKS 199
Query: 161 ----HCNTS 165
HC T+
Sbjct: 200 FFYDHCKTN 208
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 269 KNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKEN 328
++++ ER RR KL + AL AL+P + K D+ IL DA +K+L +++ LKE
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRT----LKEE 174
Query: 329 EDCEKDNEEMKSFKLDEIH--EGTSTTYLPAS--EHNKSFPACGEKGKSEVRVEVNQIND 384
++ + E M K ++ E + + P+ E +++ P E+ +++Q
Sbjct: 175 KEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALP--------EIEAKISQ--- 223
Query: 385 RDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNI 429
D LI++LCE +G + ++ I + +L++ ++ V F L+I
Sbjct: 224 NDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPKI--SKMDRAAILGDAAEYIKELLQEVDKLQDE 324
+ ++ ERNRR ++ + L LR+L+P + D+A+I+G A Y+KEL + ++
Sbjct: 124 RMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPP 183
Query: 325 LKE-NEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEH-NKSFPACGEKGKSEVRVEVNQI 382
+K ED +++ K+ G + + ++ N+ A +G +E+ V + +
Sbjct: 184 VKTATEDTGAGHDQTKTTSASS--SGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVES 241
Query: 383 NDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
+ +K+L + L+L+ +I SL L ++ NVTT + VL + V+
Sbjct: 242 HAS---LKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVK 289
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 265 RPKAKNLI-TERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQD 323
R +A N + ER RR KL +ALR++VP ISKMD+A++LGDA YI EL ++ ++
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 324 E 324
E
Sbjct: 488 E 488
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 270 NLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENE 329
++++ER RR KL + L++L+P I ++++A+IL + Y+KEL + V EL+ +
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRV----QELESSR 474
Query: 330 DCEKDNEEMKSFKLDEIHEGTSTTY---LPASEHNKSFPACG------------EKGKSE 374
+ E + + G + + + A KS P G + G S
Sbjct: 475 EPASRPSETTTRLITRPSRGNNESVRKEVCAGSKRKS-PELGRDDVERPPVLTMDAGSSN 533
Query: 375 VRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
V V V +D+D L+++ C E R+ +AI SL L V+ + +G + +R Q
Sbjct: 534 VTVTV---SDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFMGLKIRAQ 589
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 270 NLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENE 329
++++ER RR KL + L++L+P I ++++A+IL + Y+KEL + V EL+ +
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRV----QELESSR 472
Query: 330 DCEKDNEEMKSFKLDEIHEGTSTTY---LPASEHNKSFPACG------------EKGKSE 374
+ E + + G + + + A KS P G + G S
Sbjct: 473 EPASRPSETTTRLITRPSRGNNESVRKEVCAGSKRKS-PELGRDDVERPPVLTMDAGTSN 531
Query: 375 VRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
V V V +D+D L+++ C E R+ +AI SL L V+ + +G + +R Q
Sbjct: 532 VTVTV---SDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFMGLKIRAQ 587
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQ 322
K++ TER RR D F L+ L+P +K+DRA+I+G+A +YIKELL+ +++ +
Sbjct: 245 KSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFK 300
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 263 AKRPKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQ 322
A+ + + E+ RR KL + LR ++P I+K+D+ +IL D EY++EL + V +L+
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 323 DELKENEDCE-KDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSE-VRVEVN 380
+E+ D E + MK K + E TS N + G++E
Sbjct: 495 -SCRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFT 553
Query: 381 QIND--------RDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNG 424
+ D + +I+L C G L +M+ I+ L L +T +G
Sbjct: 554 GLTDNLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDG 605
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 98 GIHGEVVITNQPKWISLANSSDS-------IASHQSNSTRVLIPVFGGLIELFAAKHISK 150
G+ G +P W+ A+++DS +A + T V P GG++E+ +HI++
Sbjct: 135 GMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITE 194
Query: 151 DQNIIELVLAHCNTSIE--QRVVPAGSSYDVGLDEKCLDILLKENLQNFPSPLQLLTFVP 208
D N+I+ V + + ++PA S Y ++ N P Q+L
Sbjct: 195 DMNVIQCVKTSFLEAPDPYATILPARSDY---------------HIDNVLDPQQIL---- 235
Query: 209 GTQVLSAATRFNTHPYNEGSSRGSNPSIEHPSFDSNYGYIAQN 251
G ++ A F+T P+ S PS FD + +A +
Sbjct: 236 GDEIY--APMFSTEPFPTAS-----PSRTTNGFDQEHEQVADD 271
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQ 322
K K TER RR KD L+ L+P +K DRA+I+G+A +YIKELL+ +D+ +
Sbjct: 214 KRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFK 269
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPK--ISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
+ ++ ERNRR ++ + + +LRAL+P I + D+A+I+G A Y+K L Q + L+ +
Sbjct: 177 RINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQ 236
Query: 325 LKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQIND 384
+ ++ N E+ L+ + +S E P K E V N ++
Sbjct: 237 KRTQ---QQSNSEVVENALNHLSGISSNDLWTTLEDQTCIP------KIEATVIQNHVS- 286
Query: 385 RDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTT 421
+K+ CE ++G L+ + ++ L+L V+ N+TT
Sbjct: 287 ----LKVQCEKKQGQLLKGIISLEKLKLTVLHLNITT 319
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPK--ISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
+ ++ ERNRR ++ + L LR+L+P + D+A+I+G A Y+KEL + ++ +
Sbjct: 114 RMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPK 173
Query: 325 LKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGK----------SE 374
D + D S G T + SFP K +E
Sbjct: 174 RTRTHDPKGDKTSTSSLV------GPFTDFF-------SFPQYSTKSSSDVPESSSSPAE 220
Query: 375 VRVEVNQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
+ V V + + IK++ + + L+L+ ++ SL L ++ NVTT + +L + V+
Sbjct: 221 IEVTVAESHAN---IKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVR 276
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 270 NLITERNRRNKLKDGLFALRALVP--KISKMDRAAILGDAAEYIKELLQEVDKLQDELKE 327
++ ERNRR ++ + L +LR+L P I + D+A+I+G E+IKEL Q V L+ + K
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESK-KR 61
Query: 328 NEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHN--------KSFPACGEKGKSEVRVEV 379
+ + + ++ G +TT +P S K AC + V
Sbjct: 62 RKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEA-- 119
Query: 380 NQINDRDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTTFNGKVLNILRVQ 433
+I+ + +++++ G ++++ + L QV+ N+++ VL V+
Sbjct: 120 -KISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVK 172
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPK--ISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
+ ++ ERNRR ++ L +LR+++P I + D+A+I+G A +++K L Q++ L+ +
Sbjct: 192 RMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQ 251
Query: 325 LKENEDCEKDNEEMKSFKLDEIHEGTSTTYLPASEHNKSFPACGEKGKSEVRVEVNQIND 384
+ + DN+E +I E S + + NK + E+ S++++E I +
Sbjct: 252 KRSQQS--DDNKE-------QIPEDNSLRNISS---NKLRASNKEEQSSKLKIEATVI-E 298
Query: 385 RDFLIKLLCEHERGGFLRLMEAINSLELQVIDANVTT 421
+K+ C ++G LR + + L V+ N+T+
Sbjct: 299 SHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITS 335
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQ 322
K K TER RR L + AL+ L+P SK DRA+IL D +YI EL + V +L+
Sbjct: 212 KNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 269 KNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKEN 328
+++I+ER RR KL + ALR+L+P +K D+A++L A E + L E+ KL + +E
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREV 348
Query: 329 E-------DCEKD--NEEMKSFKLDEIHEGTS 351
E + E D EE + ++ I E TS
Sbjct: 349 EAKLAGEREIENDLRPEERFNVRIRHIPESTS 380
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 260 NSFAKRPKAKNL--ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQE 317
++ +KR +A + ++ER RR K+ + + AL+ L+P+ +K DR+++L D EY+K L +
Sbjct: 270 STSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
Query: 318 V 318
+
Sbjct: 330 I 330
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 258 IGNSFAKRPKAKNL--ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELL 315
+ + KR +A + ++ER RR+++ + + AL+ L+P+ +K D+A++L +A EY+K L
Sbjct: 275 VSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 334
Query: 316 QEVDKL 321
++ +
Sbjct: 335 LQIQMM 340
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 272 ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKL 321
++E+ RR+K+ + + AL+ L+P +K D+A++L +A EY+K+L +V L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 258 IGNSFAKRPKAKNLITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQE 317
+G+ ++ + NL +ER RR+++ + + AL+ L+P +K+D+A++L +A EY+K L +
Sbjct: 337 LGSKRSRSAEVHNL-SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQ 395
Query: 318 V 318
V
Sbjct: 396 V 396
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 258 IGNSFAKRPKAKNL--------ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAE 309
G ++PK KN+ + R RR ++ + + L+ LVP +KMD A++L +AA
Sbjct: 260 FGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAAN 319
Query: 310 YIKELLQEVDKLQD 323
Y+K L +V L++
Sbjct: 320 YLKFLRAQVKALEN 333
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%)
Query: 272 ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKL 321
++E+ RR+++ + + AL++L+P +K D+A++L +A EY+K+L +V L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 272 ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEV 318
+ E+ RR+++ L ALR LVP K+D+AA+L E +KEL Q+
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA 115
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVP--KISKMDRAAILGDAAEYIKELLQEVDKLQ 322
K ++ ERNRR ++ + L LR+L+P + + D+A+I+G EYI EL Q + L+
Sbjct: 101 KMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 272 ITERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKLQDELKENED 330
+ R RR+++ D LR+LVP SKMD ++L A Y+K L +V Q L ++E+
Sbjct: 47 VAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEE 105
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 267 KAKNLITERNRRNKLKDGLFALRALVPK--ISKMDRAAILGDAAEYIKELLQEVDKLQDE 324
+ ++ ERNRR ++ + L +LR+L+P + + D+A+I+G A ++IKEL Q + L+ E
Sbjct: 114 RMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAE 173
Query: 325 LKEN 328
+++
Sbjct: 174 KRKD 177
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus GN=Usf2 PE=1
SV=2
Length = 346
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 264 KRPKAKNLITERNRRNKLKDGLFALRALVPKI------SKMDRAAILGDAAEYIKELLQE 317
+R +A++ ER RR+K+ + + L ++P + + IL A +YI+EL Q
Sbjct: 234 ERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQT 293
Query: 318 VDKLQDELKENEDCEKDNEEMK 339
++Q+ KE E + DNE ++
Sbjct: 294 NQRMQETFKEAERLQMDNELLR 315
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus GN=Usf2 PE=1 SV=1
Length = 346
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 264 KRPKAKNLITERNRRNKLKDGLFALRALVPKI------SKMDRAAILGDAAEYIKELLQE 317
+R +A++ ER RR+K+ + + L ++P + + IL A +YI+EL Q
Sbjct: 234 ERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQT 293
Query: 318 VDKLQDELKENEDCEKDNEEMK 339
++Q+ KE E + DNE ++
Sbjct: 294 NQRMQETFKEAERLQMDNELLR 315
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 273 TERNRRNKLKDGLFALRALVPKISKMDRAAILGDAAEYIKELLQEVDKL 321
+ER RR+K+ + L+ LVP SK D+A++L + EY+K+L +V +
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio rerio GN=mycb PE=2 SV=1
Length = 396
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 220 NTHPYNEG---SSRGSNPSIEHPSFDSN---YGYIAQNAPLMQP-IGNSFAKRPKAKNLI 272
N H +N S+R P+++ F+S+ + I+ N P +S + + +
Sbjct: 261 NIHQHNYAAHPSTRNEQPAVKRIKFESHIRVFKQISHNRKCASPRTSDSEDNDKRRTHNV 320
Query: 273 TERNRRNKLKDGLFALRALVPKISKMDRAA---ILGDAAEYIKELLQEVDKL 321
ER RRN+LK FALR ++P ++ ++AA IL A E I + ++ +L
Sbjct: 321 LERQRRNELKLSFFALRDVIPDVANNEKAAKVVILKKATECIASMQEDEQRL 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,022,771
Number of Sequences: 539616
Number of extensions: 7042808
Number of successful extensions: 22760
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 22551
Number of HSP's gapped (non-prelim): 310
length of query: 433
length of database: 191,569,459
effective HSP length: 120
effective length of query: 313
effective length of database: 126,815,539
effective search space: 39693263707
effective search space used: 39693263707
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)