Query 041103
Match_columns 516
No_of_seqs 274 out of 1105
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 05:55:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jg0_A Periplasmic trehalase; 100.0 4.5E-88 1.5E-92 737.0 26.8 396 67-509 10-512 (535)
2 2z07_A Putative uncharacterize 100.0 5.6E-42 1.9E-46 362.8 11.9 268 196-493 19-419 (420)
3 3c68_A Uncharacterized protein 100.0 1.9E-38 6.5E-43 358.3 20.1 289 189-499 298-760 (761)
4 2okx_A Rhamnosidase B; alpha b 99.7 1E-15 3.6E-20 177.3 21.0 229 218-496 629-876 (956)
5 3cih_A Putative alpha-rhamnosi 99.6 3.3E-14 1.1E-18 160.7 18.4 229 219-495 386-635 (739)
6 1v7w_A Chitobiose phosphorylas 99.3 9.7E-12 3.3E-16 141.5 13.9 177 217-439 426-614 (807)
7 3qde_A Cellobiose phosphorylas 98.9 1E-08 3.5E-13 116.8 16.3 192 216-438 414-622 (811)
8 3rrs_A Cellobiose phosphorylas 98.9 1.1E-08 3.7E-13 116.7 16.1 194 216-438 421-635 (822)
9 2p0v_A Hypothetical protein BT 98.0 0.00014 4.9E-09 77.2 17.3 243 220-496 183-468 (489)
10 3p2c_A Putative glycosyl hydro 97.2 0.011 3.9E-07 62.4 17.8 258 208-496 154-450 (463)
11 3qt9_A Putative uncharacterize 96.9 0.027 9.1E-07 59.0 16.8 258 208-498 126-424 (427)
12 1lf6_A Glucoamylase; (alpha/al 96.4 0.009 3.1E-07 66.7 10.2 107 320-426 445-560 (684)
13 3qry_B Putative uncharacterize 96.1 0.091 3.1E-06 55.0 15.0 256 209-496 126-422 (426)
14 1ulv_A Glucodextranase; GH fam 96.1 0.015 5E-07 67.8 9.9 104 320-425 437-551 (1020)
15 2fba_A Glucoamylase Glu1; (alp 86.4 2 6.7E-05 46.0 9.1 52 322-373 219-273 (492)
16 2vn4_A Glucoamylase; hydrolase 85.5 2.9 9.9E-05 45.8 10.0 50 323-376 189-238 (599)
17 2rdy_A BH0842 protein; PSI-II, 82.2 5 0.00017 45.4 10.5 108 221-357 452-561 (803)
18 2eab_A Alpha-fucosidase; glyco 77.2 5.2 0.00018 45.9 8.5 38 220-257 509-546 (899)
19 1gai_A Glucoamylase-471; hydro 72.4 11 0.00036 40.1 8.9 45 323-373 188-232 (472)
20 2wvx_A Mannosidase, putative a 43.0 10 0.00036 42.4 2.5 41 330-375 452-493 (744)
21 2ww2_A Mannosidase, alpha-1,2- 42.7 8.5 0.00029 43.1 1.7 43 329-376 454-496 (737)
22 1fp3_A N-acyl-D-glucosamine 2- 41.8 33 0.0011 34.7 6.0 46 332-381 322-367 (402)
23 3gt5_A N-acetylglucosamine 2-e 36.2 44 0.0015 34.0 5.8 47 320-374 112-158 (402)
24 3gt5_A N-acetylglucosamine 2-e 34.1 45 0.0015 33.9 5.5 45 333-381 319-363 (402)
25 2gz6_A N-acetyl-D-glucosamine 32.9 95 0.0033 30.8 7.7 42 332-377 246-288 (388)
26 2xsg_A Ccman5; hydrolase, mann 32.5 22 0.00074 40.0 2.9 35 329-368 464-499 (774)
27 1h54_A Maltose phosphorylase; 32.2 76 0.0026 35.5 7.3 35 222-256 432-467 (754)
28 2zbl_A Putative isomerase; N-a 30.6 42 0.0014 34.4 4.6 48 320-375 110-157 (421)
29 1nc5_A Hypothetical protein YT 26.7 70 0.0024 32.2 5.4 47 328-378 147-194 (373)
30 2zbl_A Putative isomerase; N-a 26.4 82 0.0028 32.2 5.9 47 332-382 324-370 (421)
31 3k7x_A LIN0763 protein; Q92DQ0 25.6 71 0.0024 32.1 5.1 47 322-376 151-197 (349)
32 3iyl_X VP3; non-enveloped viru 22.2 48 0.0016 37.9 3.2 64 149-212 629-702 (1214)
33 2gz6_A N-acetyl-D-glucosamine 21.8 1.1E+02 0.0038 30.3 5.8 45 333-381 313-357 (388)
34 1h8b_A ACT-EF34, alpha-actinin 20.7 56 0.0019 25.3 2.5 26 96-122 8-33 (75)
No 1
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=100.00 E-value=4.5e-88 Score=737.00 Aligned_cols=396 Identities=31% Similarity=0.531 Sum_probs=343.9
Q ss_pred HHhhchhHHhhhhcCC-C-CCCCcCCCCCCCCHHHHHHHHhcCCccCCCCCChHHHHHHHHhhcCCCCCCcccCCCCCCC
Q 041103 67 LERVQEIALATFGKKD-F-DPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFV 144 (516)
Q Consensus 67 ~~~~~g~ll~~vq~~~-f-DsKtFvD~~~k~~~~~il~~f~~l~~~~~~~~~~~~l~~Fv~~~F~~~g~el~~~~p~d~~ 144 (516)
.+||+|+||++||+++ | ||||||||++|.+|++||++|++++. .++++|++||++||..||.+ + +|+
T Consensus 10 ~~~~~g~l~~~vq~~~~f~d~k~fvd~~~~~~~~~~~~~~~~~~~-----~~~~~l~~fv~~~f~~~~~~-~-----~~~ 78 (535)
T 2jg0_A 10 PDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQN-----QSGFDLRHFVNVNFTLPKEG-E-----KYV 78 (535)
T ss_dssp HHHHTHHHHHHHHHTTCSSSHHHHHTCEESSCHHHHHHHHHHHTT-----STTCCHHHHHHHHEECCC----------CC
T ss_pred chhhhHHHHHHHHHccCCCCCCcCCCCcCCCCHHHHHHHHHHhhc-----CcHHHHHHHHHHhcCCCCcc-c-----cCC
Confidence 5799999999999999 9 99999999999999999999999874 46789999999999999975 3 344
Q ss_pred CCCCCcCCCCCChhHHHHHHHHHHhhhccccccccccccCCCccccccCCCCcccCCCCCcceeeccccccc--------
Q 041103 145 PEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI-------- 216 (516)
Q Consensus 145 ~~p~~~l~~i~d~~~r~~a~~i~~lW~~L~R~~~~~v~~~p~~~sli~lp~pfiVPGGRFrE~YYWDSYfi~-------- 216 (516)
++| .+.|+.+||++|+.|+|+++ ++|+++||||||+|||||||||+|+|||||||++
T Consensus 79 ~~~-----------~~~~~~~i~~~W~~l~r~~~----~~~~~~sli~~p~~~vvPGg~F~~~~~WDs~f~~~gLl~~~~ 143 (535)
T 2jg0_A 79 PPE-----------GQSLREHIDGLWPVLTRSTE----NTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGH 143 (535)
T ss_dssp CCT-----------TCCHHHHHHHHTTTTEECCS----SCCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTC
T ss_pred CCc-----------hHHHHHHHHHHHHHHcCCCC----CCCCccccccCCCCcccCCccccccchHHHHHHHHHHHHcCC
Confidence 434 13467899999999999886 4689999999999999999999999999999998
Q ss_pred --------------------------------cCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCccc----
Q 041103 217 --------------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKV---- 260 (516)
Q Consensus 217 --------------------------------SQPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v---- 260 (516)
||||+|++||.+||+++++ +||++++|.|+|||+||+++|+..
T Consensus 144 ~~~A~~~l~~~~~~~~~~G~IPng~r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~ 222 (535)
T 2jg0_A 144 WDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQ 222 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTE
T ss_pred HHHHHHHHHHHHHhhccCCcccCCCCccCCCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccc
Confidence 8999999999999999875 999999999999999999998731
Q ss_pred ----cccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccCCccc------------c---------cCCCCCCccccc
Q 041103 261 ----NVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASD------------K---------ENTSDFTTLAIT 315 (516)
Q Consensus 261 ----~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~~~~e------------k---------~d~~~l~si~t~ 315 (516)
.+...+|. +|++||+....|||||||+|+.++.+...... . .+.++|.+++|.
T Consensus 223 ~~~~~~~~~~G~--~l~~y~~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~ 300 (535)
T 2jg0_A 223 QEKRVVKLQDGT--LLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTT 300 (535)
T ss_dssp EETTEEECTTSC--EEECCCCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGG
T ss_pred cccceeecCCCC--cceeeccCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCc
Confidence 11223453 69999999999999999999988764321100 0 235667788999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCcccchhhhhcccCCC
Q 041103 316 SILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQN 395 (516)
Q Consensus 316 ~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~ 395 (516)
+|+||||||+||.+++.||+||+++|+.+++++|+++|++++++|+++|||++.|+|+||++.+++ ++
T Consensus 301 ~i~~VDlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~------------~~ 368 (535)
T 2jg0_A 301 SIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHK------------VR 368 (535)
T ss_dssp GEECHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTE------------EC
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCC------------Ee
Confidence 999999999999999999999999999999999999999999999999999999999999998765 56
Q ss_pred CccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceeeeccCCChhh-----------------------------
Q 041103 396 NNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ----------------------------- 446 (516)
Q Consensus 396 ~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIpTsl~~sgqQ----------------------------- 446 (516)
+++++++++|||+|++++ +++++|++.|.+ +|+.++||+|+..++|+|
T Consensus 369 ~~~~~s~~~PL~~gi~~~--e~a~~v~~~l~~-~l~t~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~~~~A~~ 445 (535)
T 2jg0_A 369 NQLTAAALFPLYVNAAAK--DRANKMATATKT-HLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMD 445 (535)
T ss_dssp CCCBGGGGHHHHTTCSCH--HHHHHHHHHHHH-HTEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCHHHHHH
T ss_pred eeehhhhHHHHhcCCCCH--HHHHHHHHHHHH-HhccCCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCCHHHHHH
Confidence 789999999999999995 578999999975 788999999988887765
Q ss_pred -------HHHHHHHHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHHHcCCCCCCCCCCCcc
Q 041103 447 -------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWV 509 (516)
Q Consensus 447 -------~n~~~y~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~yg~~~~~~~~c~~~ 509 (516)
++...|.++|.|+||||+.+++..|+||||++|.||||||||+|.|+.+||..++ .|+.+
T Consensus 446 la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~~---~~~~~ 512 (535)
T 2jg0_A 446 ISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQ---PCDNV 512 (535)
T ss_dssp HHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSS---CCSSC
T ss_pred HHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhcc---CCccc
Confidence 3456677889999999999877778889999999999999999999999999763 47644
No 2
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-42 Score=362.82 Aligned_cols=268 Identities=17% Similarity=0.265 Sum_probs=200.0
Q ss_pred CcccCC-CCCcceeeccccccc----------------------------------------------------------
Q 041103 196 PIVIPS-SRFREVYYWDSYWVI---------------------------------------------------------- 216 (516)
Q Consensus 196 pfiVPG-GRFrE~YYWDSYfi~---------------------------------------------------------- 216 (516)
+|+||| |||+|+|||||||++
T Consensus 19 ~~~vP~~~~f~~~~~wDs~~~~~gl~~~~~~~a~~~l~~~~~~~q~~~G~ip~~v~~~~~~~y~p~~~~w~~~~~~~~~~ 98 (420)
T 2z07_A 19 AFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGPDGMLPHIVFHEQSRDYFPGPDVWGREARAQPAT 98 (420)
T ss_dssp SCBCSSTTCCSCEEHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCTTCCCCSEEECCSCCCCC-----------CCCEE
T ss_pred CCcCCCCCCCCCccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhCCCcceecccCCCcccCcchhhhcccccccCCC
Confidence 599999 999999999999999
Q ss_pred ---cCCchHHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCee---------eeEeeecC--
Q 041103 217 ---SQPPILSAMVYDIYNRTGD----FDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNH---------TLSRYYAM-- 278 (516)
Q Consensus 217 ---SQPPlla~mV~~~y~~t~D----~~fL~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~---------~L~rY~~~-- 278 (516)
||||++++||+.||+.|+| .+||++++|.|+|+++||+++++. +.+|... .++++|++
T Consensus 99 ~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p~l~~~~~~~~~~~d~----~~~Gl~~~~~~we~G~~~~~~w~~~~ 174 (420)
T 2z07_A 99 SGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDP----YRTGLVVIVHPWESGMDNSPAWDKPL 174 (420)
T ss_dssp CSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCCSCCCBSSGGGGTCTTCGGGHHHH
T ss_pred CCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHhcCCCC----CCCCceeeecCCCcCCCCCccccccc
Confidence 2789999999999999999 999999999999999999998863 3345311 11224433
Q ss_pred --CCCCCCCCc-chhhhhhcccC--Ccccc-----------cCCCCC---CccccccccchhHHHHHHHHHHHHHHHHHH
Q 041103 279 --WNKPRPESS-TIDKAHSSKLL--NASDK-----------ENTSDF---TTLAITSILPIDLNIFILKMELDIASMAQI 339 (516)
Q Consensus 279 --~~~PRPESy-reD~~~A~~~~--~~~ek-----------~d~~~l---~si~t~~iiPVDLNAlLy~~e~~LA~la~~ 339 (516)
...|++|+| |+|+.++.... +..+. +.+.+. .++.|..++||||||+||++++.||+||++
T Consensus 175 ~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~ 254 (420)
T 2z07_A 175 SRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVL 254 (420)
T ss_dssp HTCCC-----------CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHH
Confidence 256788999 88987765321 11110 223333 346788999999999999999999999999
Q ss_pred hCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCchHHHH
Q 041103 340 VGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVE 419 (516)
Q Consensus 340 lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~~a~ 419 (516)
+|+. +++|+++|+++|++|++ |||++.|+|+||++.+++ +++..++++++|||+|++++ ++++
T Consensus 255 lg~~--a~~~~~~a~~~~~ai~~-~Wd~~~g~~~d~~~~~g~------------~~~~~~~~~~~pL~~g~~~~--~~a~ 317 (420)
T 2z07_A 255 LQED--PYEIEEWIVRGEVGLEA-LWDREAGFYFSWDLVAGE------------PIAVKTSAGFLPLFAGTPHQ--GRAS 317 (420)
T ss_dssp TTCC--CHHHHHHHHHHHHHHHH-TEETTTTEECCEETTTTE------------ECCCCBGGGGTHHHHTCSCH--HHHH
T ss_pred hCcc--HHHHHHHHHHHHHHHHH-hhCcccCeeEeeeCCCCC------------eeccccHHhHHHHHcCCCCH--HHHH
Confidence 9987 88999999999999999 999999999999987764 45677899999999999985 5688
Q ss_pred HHHhhhhhcCCc--ccceeeeccCCC-----hhh------------------------------HHHHHHHHhCcccccc
Q 041103 420 KVRKGFQSSGLL--GAAGIATSLTRS-----GEQ------------------------------CNYVAYKETGAMHEKY 462 (516)
Q Consensus 420 ~vl~~L~~~~ll--~~gGIpTsl~~s-----gqQ------------------------------~n~~~y~~tG~m~EKY 462 (516)
+|++.|. +++ .++||+|....+ ++| .++..-.++|.|+|||
T Consensus 318 ~v~~~l~--~~~~~~~~gi~t~~~~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~~~E~y 395 (420)
T 2z07_A 318 LLAQEAE--RWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREYY 395 (420)
T ss_dssp HHHHHHH--HHTTTCSSSCBSBCTTSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHH--HHhccCCCCcCcCCCcCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCCeeeee
Confidence 8999886 566 889998844322 233 1111112357899999
Q ss_pred cccccccCCCCCccCCCCCccccHHHHHHHH
Q 041103 463 DVEKCRDIGGGGEYIPQTGFSWSNGAVLAFL 493 (516)
Q Consensus 463 dv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll 493 (516)
|+.++ .|.|+ .+|||||||+|.||
T Consensus 396 d~~~g--~~~g~-----~~fgWs~~~~l~ll 419 (420)
T 2z07_A 396 DPLTG--QGRGG-----EGFSWSAALALFWT 419 (420)
T ss_dssp CTTTC--CEEEE-----ESCHHHHHHHHHHT
T ss_pred CCCCC--CcCCC-----CCCchHHHHHHHHh
Confidence 99875 23333 57999999999986
No 3
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=1.9e-38 Score=358.32 Aligned_cols=289 Identities=19% Similarity=0.248 Sum_probs=218.9
Q ss_pred ccccCCCCcccCC--CC-Ccc--eeeccccccc-----------------------------------------------
Q 041103 189 TLLLLPGPIVIPS--SR-FRE--VYYWDSYWVI----------------------------------------------- 216 (516)
Q Consensus 189 sli~lp~pfiVPG--GR-FrE--~YYWDSYfi~----------------------------------------------- 216 (516)
+...||+++|||+ +| |+| +|+|||+|++
T Consensus 298 ~~g~v~~~~v~P~~g~~wF~~~~~w~wDs~~~a~gL~~~~~elAr~~L~~l~~~Q~~~~d~~r~~~~G~IP~~~~~~~~p 377 (761)
T 3c68_A 298 PGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSP 377 (761)
T ss_dssp CBTTBCSCEECSCTTCTTTCTTCBCHHHHHHHHHHHTTTCHHHHHHHHHHHHTTCCCTTCSSCGGGTTCCCSBBCSSCCG
T ss_pred ccCcCCCCeEEecCCCCCCCcCCeeccHHHHHHHHHHHcCHHHHHHHHHHHHHhhhhcccCCccCCCCEeeeeeccCCcc
Confidence 3456799999984 45 899 9999999998
Q ss_pred -------------cCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCC----
Q 041103 217 -------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMW---- 279 (516)
Q Consensus 217 -------------SQPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~---- 279 (516)
+|||++++||++||+.|+|.+||++++|.|+++|+||+++|+. +.+| |.+|....
T Consensus 378 ~r~g~~~~~~~~~sqPPl~~~av~~yy~~tgD~~fL~e~~P~L~~~~~w~~~~rd~----d~~G----L~~y~~~~~~~~ 449 (761)
T 3c68_A 378 ERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDH----NGNG----VPEYGATRDKAH 449 (761)
T ss_dssp GGTSCCSSCBCSCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSCT----TCSS----CCCCEEECCTTT
T ss_pred cccCccccccCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCC----CcCc----cEEecccccccc
Confidence 3689999999999999999999999999999999999999873 3344 78887553
Q ss_pred CCCCCCCcchhhhhhc----------------------------------ccCCccc------------------c----
Q 041103 280 NKPRPESSTIDKAHSS----------------------------------KLLNASD------------------K---- 303 (516)
Q Consensus 280 ~~PRPESyreD~~~A~----------------------------------~~~~~~e------------------k---- 303 (516)
++||||||++|...+. +....++ +
T Consensus 450 ~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~ 529 (761)
T 3c68_A 450 NTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWT 529 (761)
T ss_dssp BCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGC
T ss_pred cCCCcchhccccccccchhcccccccchhccccccccchhhhhhhccccCCCCcchhccccccccccccccccccccchh
Confidence 7999999999965421 1100000 0
Q ss_pred ----cCCCCCCcccc--ccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeec
Q 041103 304 ----ENTSDFTTLAI--TSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWI 377 (516)
Q Consensus 304 ----~d~~~l~si~t--~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl 377 (516)
++......+.+ ..++||||||++|.+++.||+||+++|+.+.+++|+++|++++++|+++|||++.|+|+||++
T Consensus 530 ~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~ 609 (761)
T 3c68_A 530 VKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRI 609 (761)
T ss_dssp CCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEEC
T ss_pred hhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEec
Confidence 00000011111 256799999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcc---cchhhhhcccCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhhhc-CCcccceeeeccCC-----Chhh--
Q 041103 378 SNGTS---SQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSS-GLLGAAGIATSLTR-----SGEQ-- 446 (516)
Q Consensus 378 ~~~~~---~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~-~ll~~gGIpTsl~~-----sgqQ-- 446 (516)
..++. |. .. ...++.+++++++|||+|++++ ++++++++.|.++ .|+.++||+|.... ++.|
T Consensus 610 ~~~~~~~~~~-g~----~~sn~~~~~s~~~pL~~Gl~~~--e~a~~vl~~L~~~~~l~t~~Girtls~~~p~y~p~~yw~ 682 (761)
T 3c68_A 610 EDKPLANGCA-GK----PIVERGKGPEGWSPLFNGAATQ--ANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWR 682 (761)
T ss_dssp CSSCCTTSCS-SC----BCGGGCCCGGGGHHHHTTCSCH--HHHHHHHHHHTCTTTTCCSSCSCSSCTTCTTCCTTCTTT
T ss_pred CCCccccccc-cc----eeecchhhHHHHHHHHcCCCCH--HHHHHHHHHHhChhhhcCCCCccccCCCCcccCCCcccc
Confidence 64320 00 00 0011346789999999999984 5789999999875 46799999985543 2222
Q ss_pred ------HH--------------------------HHHHHHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHH
Q 041103 447 ------CN--------------------------YVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLE 494 (516)
Q Consensus 447 ------~n--------------------------~~~y~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~ 494 (516)
++ +..+.++|.|+|+||+.++.. .|+ .+|||||||+|.|+.
T Consensus 683 GpvW~~~~~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p--~G~-----~~fgWSaa~~l~ll~ 755 (761)
T 3c68_A 683 GRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQ--QGA-----PNFSWSAAHLYMLYN 755 (761)
T ss_dssp TCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCE--ESC-----SSCHHHHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCc--CcC-----CCchHHHHHHHHHHH
Confidence 00 111234699999999987632 233 678999999999999
Q ss_pred HcCCC
Q 041103 495 EFGWP 499 (516)
Q Consensus 495 ~yg~~ 499 (516)
+|+.+
T Consensus 756 ~y~~~ 760 (761)
T 3c68_A 756 DFFRK 760 (761)
T ss_dssp HTCCC
T ss_pred HHhcc
Confidence 99875
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.67 E-value=1e-15 Score=177.33 Aligned_cols=229 Identities=18% Similarity=0.256 Sum_probs=151.1
Q ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhccc
Q 041103 218 QPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKL 297 (516)
Q Consensus 218 QPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~ 297 (516)
++|++.++++.+|+.|+|++||++++|.|++.++||.+.++ .+|. ..+. .+ .+ .|..
T Consensus 629 ~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d------~~GL----l~~~-~~------~~-~DW~----- 685 (956)
T 2okx_A 629 WTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHID------DSGL----LNMA-GW------NL-LDWA----- 685 (956)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBC------TTSS----BCCS-SC------CC-CCSS-----
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC------CCCC----EEeC-CC------Cc-cCcc-----
Confidence 35788999999999999999999999999999999987543 2452 2220 00 01 1110
Q ss_pred CCcccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeec
Q 041103 298 LNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWI 377 (516)
Q Consensus 298 ~~~~ek~d~~~l~si~t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl 377 (516)
+..+ ...-.++.+|+++|.+.+.++++|+++|+.+.+++|+++|++++++|++.+||++.|.|.|+..
T Consensus 686 -------d~~~-----~~~G~~~~~~a~~~~al~~~a~lA~~LG~~~~a~~y~~~A~~lk~ai~~~~wd~~~g~y~d~~~ 753 (956)
T 2okx_A 686 -------PIDQ-----PNEGIVTHQNLFLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEEKRAYIDCIH 753 (956)
T ss_dssp -------SCCC-----CSSSEEHHHHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHHHHSEETTTTEECSEEC
T ss_pred -------CCCC-----CCCCcCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeeec
Confidence 0000 0011268999999999999999999999999999999999999999999999999999999864
Q ss_pred cCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhhhc---CCccccee-ee-----ccCCChhh--
Q 041103 378 SNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSS---GLLGAAGI-AT-----SLTRSGEQ-- 446 (516)
Q Consensus 378 ~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~---~ll~~gGI-pT-----sl~~sgqQ-- 446 (516)
.+++. .......++++||++|+++++ +++++ +.|... ++...|++ ++ .+...|..
T Consensus 754 ~~g~~-----------~~~~~~~s~~lall~Gl~p~~--~~~av-~~Ll~~~~~gy~~~Gt~w~~~~li~aLar~G~~d~ 819 (956)
T 2okx_A 754 ADGRR-----------SDVYSMQTQVVAYLCGVAQGE--REAVI-EGYLSSPPPAFVQIGSPFMSFFYYEALEKAGRQTL 819 (956)
T ss_dssp TTSCB-----------CCCCBHHHHHHHHHTTCSCHH--HHHHH-HHHHHSCCTTSBCCCSHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCc-----------ccccccHHHHHHHHhCCCCHH--HHHHH-HHHhcCCCcccccCCChhHHHHHHHHHHHCCCHHH
Confidence 44321 111234788999999999963 45555 444332 22110111 00 01122221
Q ss_pred ------HHHHHHHHhC--cccccccccccccCCCCCccCCCCCccccHHHHHHHHHHc
Q 041103 447 ------CNYVAYKETG--AMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEF 496 (516)
Q Consensus 447 ------~n~~~y~~tG--~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~y 496 (516)
..+......| .|+|.||....+..++ |.+.....|||++|++..|+...
T Consensus 820 A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~-~~~~~s~nh~Wsag~~~~L~q~l 876 (956)
T 2okx_A 820 MLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNP-DMLTRSHCHAWSAAPGYFLGSSI 876 (956)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSST-TSSCSCSCCGGGCTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCccceeccCCCCCcccC-CCcccccCcHHHHHHHHHHHHHh
Confidence 1122222334 6999999876533222 22323467999999999988754
No 5
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=3.3e-14 Score=160.65 Aligned_cols=229 Identities=18% Similarity=0.249 Sum_probs=150.5
Q ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeec-CCCCCCCCCcchhhhhhccc
Q 041103 219 PPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYA-MWNKPRPESSTIDKAHSSKL 297 (516)
Q Consensus 219 PPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~-~~~~PRPESyreD~~~A~~~ 297 (516)
+|++..+++.||+.|+|.+||++++|.|++.++|+.+.++ .+|. ..+.. .|..+ .|.
T Consensus 386 ~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d------~~GL----~~~~~G~W~~~---dW~--------- 443 (739)
T 3cih_A 386 TFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTN------KNGM----VEGMSGDWVFV---DWA--------- 443 (739)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBC------TTSC----BCCCTTCBCCS---CCC---------
T ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcC------CCCC----cccCCCCcccC---CCc---------
Confidence 6788899999999999999999999999999999887543 3552 21110 00000 000
Q ss_pred CCcccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeec
Q 041103 298 LNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWI 377 (516)
Q Consensus 298 ~~~~ek~d~~~l~si~t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl 377 (516)
++ ....+-.+|++|+++|.+.+.+|+||+++|+.+.|++|+++|+++|++|++.|||++.|.|.|--
T Consensus 444 -------d~-----~~~~~G~~~~~~a~~y~al~~~a~lA~~lG~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~~~- 510 (739)
T 3cih_A 444 -------DG-----YLDKKGELSFEQVLFCRSLETMALCADLVGDKDGQQKYEKLASALKAKLEPTFWNNQKQAFVHNC- 510 (739)
T ss_dssp -------TT-----CCCCSSEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHEETTTTEECSEE-
T ss_pred -------cc-----ccCCCCcchHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCcccCeeEeec-
Confidence 00 00112236899999999999999999999999999999999999999999999999999988622
Q ss_pred cCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceee-------eccCCChhh----
Q 041103 378 SNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIA-------TSLTRSGEQ---- 446 (516)
Q Consensus 378 ~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIp-------Tsl~~sgqQ---- 446 (516)
.+++. .......++++||++|++++ ++++++++.|........-|-| -.+...|+.
T Consensus 511 ~~G~~-----------~d~~~~~s~~laL~~Gl~~~--e~~~~v~~~L~~~~~~~~~~tp~~~~~~~~aL~~~G~~d~A~ 577 (739)
T 3cih_A 511 VDGRQ-----------SDAVTRYANMFSVFFDYLNA--DKQQAIKQSVLLNDEILKITTPYMRFYELEALCALGEQETVM 577 (739)
T ss_dssp ETTEE-----------CSCCCHHHHHHHHHTTCSCH--HHHHHHHHHTTTCTTSCCCCSHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCc-----------CcccchHHhHHHHHHCCCCH--HHHHHHHHHHhcCcccccccchhHHHHHHHHHHHcCCHHHHH
Confidence 23320 11134468999999999985 4678888887542111111111 012223332
Q ss_pred ----HHHHHHHHhC--ccccccccccccc--C-CCCCccCCCCCccccHHHHHHHHHH
Q 041103 447 ----CNYVAYKETG--AMHEKYDVEKCRD--I-GGGGEYIPQTGFSWSNGAVLAFLEE 495 (516)
Q Consensus 447 ----~n~~~y~~tG--~m~EKYdv~~~g~--~-GgGGEY~~Q~GFGWTNGV~L~ll~~ 495 (516)
..+......| .|||+||+...+. . ..|..|-.....+|++|++..|...
T Consensus 578 ~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~HaW~ag~~~~l~~~ 635 (739)
T 3cih_A 578 KEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCHAWGASPIYLLGKY 635 (739)
T ss_dssp HHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSBGGGCTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceeEEecccccCCcccccccccccCcccccccccchHHHHHHH
Confidence 1122222344 5999999863211 1 1233333445568999987777763
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.30 E-value=9.7e-12 Score=141.52 Aligned_cols=177 Identities=14% Similarity=0.238 Sum_probs=126.9
Q ss_pred cCCchHHHHHHHHHHHcCCHHHHHHHHHH-----------HHHHHHHHHhcCccccccCCCCCeeeeEee-ecCCCCCCC
Q 041103 217 SQPPILSAMVYDIYNRTGDFDFVKKALPA-----------LLKEHQFWNSRIHKVNVQDDQGGNHTLSRY-YAMWNKPRP 284 (516)
Q Consensus 217 SQPPlla~mV~~~y~~t~D~~fL~~~lP~-----------L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY-~~~~~~PRP 284 (516)
..++++.+++.+||+.|+|.+||++++|. +++..+|..+..+ .+|. ..+ ..+|+.
T Consensus 426 D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~------~~GL----~~~~~~DW~D--- 492 (807)
T 1v7w_A 426 DDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVG------QTGI----CKGLRADWND--- 492 (807)
T ss_dssp SGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBC------TTSC----BEEETCSSST---
T ss_pred chhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCC------CCCC----cccCCCCCCC---
Confidence 67889999999999999999999999885 9999999876543 3563 222 122211
Q ss_pred CCcchhhhhhcccCCcccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 041103 285 ESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVF 364 (516)
Q Consensus 285 ESyreD~~~A~~~~~~~ek~d~~~l~si~t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~l 364 (516)
+.+. . .-.+|.+|+++|.+.+.+|+||+.+|+.+.|++|+++|+++|++|++.+
T Consensus 493 ---------------------~~~~---~--~g~~v~~~a~~y~al~~~a~la~~lG~~~~a~~~~~~A~~lk~~~~~~~ 546 (807)
T 1v7w_A 493 ---------------------CLNL---G--GGESSMVSFLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHL 546 (807)
T ss_dssp ---------------------TCCC---E--EEEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---------------------cCCC---C--CCeehhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 0011 0 2357999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEeeeccCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceeeec
Q 041103 365 WNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATS 439 (516)
Q Consensus 365 WDee~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIpTs 439 (516)
||++.+.|...-...+..+.. ......+....++.+||++|++++ ++++++++.+.+ .+..+.|+.+.
T Consensus 547 w~~~~~~f~~~~~~d~~~~g~----~~~~~~~~~~~~~~~al~~g~~~~--e~a~~~l~~v~~-~L~~~~G~~~~ 614 (807)
T 1v7w_A 547 WDDEGGWYIRGLTKNGDKIGT----AQQQEGRVHLESNTLAVLSGLASQ--ERGEQAMDAVDE-HLFSPYGLHLN 614 (807)
T ss_dssp EETTTTEECCEECTTSCEESC----TTCSSCCEEHHHHHHHHHTTCSCH--HHHHHHHHHHHH-HHEETTEECSE
T ss_pred cCCCCCeeeeeeccCCCCcCC----ccCCCCcCcccchHHHHhhCCCCH--HHHHHHHHHHHH-hcCCCCceeec
Confidence 999866554332222210000 000012345578899999999985 467777777754 34457888763
No 7
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=98.93 E-value=1e-08 Score=116.83 Aligned_cols=192 Identities=14% Similarity=0.072 Sum_probs=124.7
Q ss_pred ccCCchHHHHHHHHHHHcCCHHHHHH-------------HHHHHHHHHHHHHhcCccccccCCCCCeeeeEee-ecCCCC
Q 041103 216 ISQPPILSAMVYDIYNRTGDFDFVKK-------------ALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRY-YAMWNK 281 (516)
Q Consensus 216 ~SQPPlla~mV~~~y~~t~D~~fL~~-------------~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY-~~~~~~ 281 (516)
+..+-.+.++|..|++.|+|.+||++ +|+.+.+..+|-++... .+|. ..+ .++|+.
T Consensus 414 ~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g------~~GL----~~~g~~DWnD 483 (811)
T 3qde_A 414 NDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLG------PHGL----PLIGRADWND 483 (811)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBC------TTSS----BBCBTCSSST
T ss_pred ccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCC------CCCC----cccccCCchh
Confidence 34455688999999999999999975 57788888887554433 3453 322 123332
Q ss_pred CCCC-CcchhhhhhcccCCcccccCCCCCCccc-cccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Q 041103 282 PRPE-SSTIDKAHSSKLLNASDKENTSDFTTLA-ITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQA 359 (516)
Q Consensus 282 PRPE-SyreD~~~A~~~~~~~ek~d~~~l~si~-t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~a 359 (516)
.... .+-.|+. ..+ ...+-+ ...-.+|-+|+++|.+.+.+|.||+.+|+.+.|+.|+++|++++++
T Consensus 484 ~ln~~~~~~~vg--~~~----------~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd~~~A~~~~~~A~~lk~a 551 (811)
T 3qde_A 484 CLNLNCFSTVPD--ESF----------QTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGLEEEARKAQQHIDAMKEA 551 (811)
T ss_dssp TCCSSCCCCCTT--SCT----------TTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccC--ccc----------cccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2110 0000100 000 000000 0234569999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCeEEeeeccCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCchH-HHHHHHhhhhhcCCcccceeee
Q 041103 360 INSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTC-IVEKVRKGFQSSGLLGAAGIAT 438 (516)
Q Consensus 360 In~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~~~-~a~~vl~~L~~~~ll~~gGIpT 438 (516)
|++.+||+ +.|.+.-...++... -......+.+..+..+++++|++++ + +++++++.+.+ .+.++.||++
T Consensus 552 ~~~~~Wdg--~~y~ra~~~dg~~~g----s~~~~~~qi~~~~q~~avlsGia~~--e~ra~~~m~~v~~-~L~t~~Glrl 622 (811)
T 3qde_A 552 ILKYGYDG--EWFLRAYDDFGRKVG----SKENEEGKIFIESQGFCVMAEIGLE--DGKALKALDSVKK-YLDTPYGLVL 622 (811)
T ss_dssp HHHHSBCS--SSBCCEECTTSCEES----STTSSSCCEESHHHHHHHHTTCSSS--SSHHHHHHHHHHH-HHCCTTCCCS
T ss_pred HHHhccCc--CeEEEEEcCCCCCCC----ccCCCCceEEecchhHHHHhCCCCc--hHHHHHHHHHHHH-HhCCCcceEe
Confidence 99999986 444332222222100 0001123456677789999999986 5 68888888765 5678899976
No 8
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=98.92 E-value=1.1e-08 Score=116.69 Aligned_cols=194 Identities=14% Similarity=0.079 Sum_probs=124.5
Q ss_pred ccCCchHHHHHHHHHHHcCCHHHHHH-------------HHHHHHHHHHHHHhcCccccccCCCCCeeeeEee-ecCCCC
Q 041103 216 ISQPPILSAMVYDIYNRTGDFDFVKK-------------ALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRY-YAMWNK 281 (516)
Q Consensus 216 ~SQPPlla~mV~~~y~~t~D~~fL~~-------------~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY-~~~~~~ 281 (516)
...+-.|.++|..|++.|||.+||++ +++.+.+..+|-++.+. .+| |..+ .++|+.
T Consensus 421 ~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g------~~G----Lp~~g~gDWnD 490 (822)
T 3rrs_A 421 NDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRG------PHG----LPLIGRADWND 490 (822)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBC------TTS----SBBCBTCSSST
T ss_pred cchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCC------CCC----CcccCCCcchh
Confidence 34455688999999999999999986 56688888887665433 244 3332 223432
Q ss_pred CCCC-CcchhhhhhcccCCcccccCCCCCCccc-cccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Q 041103 282 PRPE-SSTIDKAHSSKLLNASDKENTSDFTTLA-ITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQA 359 (516)
Q Consensus 282 PRPE-SyreD~~~A~~~~~~~ek~d~~~l~si~-t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~a 359 (516)
.... .+-.|+. ..+. ..+-+ ...-.+|.+|+++|.+.+.+|+||+.+|+.+.|+.|+++|++++++
T Consensus 491 ~ln~~~~~~~vg--~~~~----------~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~~~~A~~~~~~A~~lk~a 558 (822)
T 3rrs_A 491 CLNLNCFSTTPG--ESFQ----------TTENQAGGVAESTFIAAQFVLYGEQYAELAARRGLADVADRARGHVAEMRDA 558 (822)
T ss_dssp TCCTTCCCCSTT--CCTT----------TCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccc--cccc----------ccccccCCccccHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 2110 0000000 0000 00000 0234569999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCeEEeeeccCCcccchhhhhcccCCCCccchhhHHHHhhcCCCCc-----hHHHHHHHhhhhhcCCcccc
Q 041103 360 INSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSD-----TCIVEKVRKGFQSSGLLGAA 434 (516)
Q Consensus 360 In~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~~PLwagia~~~-----~~~a~~vl~~L~~~~ll~~g 434 (516)
|++.+||. +.|...-...++... -+.....+.+..+.-+++++|+++++ ..+++++++.+.+ .|.++.
T Consensus 559 ~~~~~Wdg--~~y~ra~d~dg~~~g----s~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~~al~~v~~-~L~t~~ 631 (822)
T 3rrs_A 559 LLTDGWDG--SWFLRAYDYYGNPIG----TDAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAIKALDSVNE-MLATDH 631 (822)
T ss_dssp HHTTTBCS--SSBCCEECTTSCEES----CTTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHHHHHHHHHH-HTEETT
T ss_pred HHHhccCc--ceeEEEEcCCCCCcc----ccCCCCceEEeccchhHhhcCCCCcccccchHHHHHHHHHHHHH-HcCCCC
Confidence 99999986 333221112221100 00011234556677799999999863 1168888888854 567899
Q ss_pred eeee
Q 041103 435 GIAT 438 (516)
Q Consensus 435 GIpT 438 (516)
||++
T Consensus 632 Girl 635 (822)
T 3rrs_A 632 GMVL 635 (822)
T ss_dssp EEBS
T ss_pred eEEE
Confidence 9977
No 9
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=98.00 E-value=0.00014 Score=77.24 Aligned_cols=243 Identities=16% Similarity=0.189 Sum_probs=138.8
Q ss_pred chHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccC
Q 041103 220 PILSAMVYDIYNRTGDFDFVKKAL-PALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLL 298 (516)
Q Consensus 220 Plla~mV~~~y~~t~D~~fL~~~l-P~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~ 298 (516)
-.+..+.+.||+.|+|.+|+.+.+ .++++-.++|.++.+. +|. .+.++|-.. +.| ..|.-.-.+..
T Consensus 183 a~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~------~~~-~~~Y~F~r~--t~~----~~dtl~~~G~G 249 (489)
T 2p0v_A 183 CYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRK------DDA-KGPYRFQRK--TER----ALDTMTNDGWG 249 (489)
T ss_dssp HHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCS------SCS-SCSCCCCCC--BSC----GGGSCHHHHTC
T ss_pred HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcc------cCC-CCCceEeec--CCC----cccccccCCCC
Confidence 345568889999999999987666 7888888999885442 121 012333211 111 11111100100
Q ss_pred Ccccc---------cCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhcccCC
Q 041103 299 NASDK---------ENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVG-DNRTAESFLKTAQARKQAINSVFWNEE 368 (516)
Q Consensus 299 ~~~ek---------~d~~~l~si~t~~iiPVDLNAlLy~~e~~LA~la~~lG-~~~~A~~~~~~A~~rk~aIn~~lWDee 368 (516)
+ +-+ |-+.+. |..-.-|==|++++...+.+|+|++.+| +.+.+++|++.|++++++|.++.|.+.
T Consensus 250 ~-pv~~tGLi~S~fRPSDDa----~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~ 324 (489)
T 2p0v_A 250 N-PVKPVGLIASAFRPSDDA----TTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYAVCNH 324 (489)
T ss_dssp S-CCCCSSCCCCSBCTTSCB----CSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEE
T ss_pred C-ccCCCCceeCCCCCCCcc----hhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecC
Confidence 0 000 011111 1122336679999999999999999999 556699999999999999999999985
Q ss_pred --CCeEEeeeccCCcccchhhhhcccCCCCccchhh-HHHHhhcCCCCchHHHHHHHhhhhhcC---Cc---ccceeeec
Q 041103 369 --KGQWLDYWISNGTSSQECRRWKASNQNNNAFASN-FVPIWIDLFNSDTCIVEKVRKGFQSSG---LL---GAAGIATS 439 (516)
Q Consensus 369 --~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~-~~PLwagia~~~~~~a~~vl~~L~~~~---ll---~~gGIpTs 439 (516)
.|.-|-|...... ..... ....-+|- .+| +.|..+.+..+..+.++.+.+.. +. ..-||.+.
T Consensus 325 p~~G~ifAyEVDG~G-~~~~m-------DDanvpSLLslP-ylG~~~~dDpiy~nTr~~IlS~~NPyy~~G~~~~GIGsp 395 (489)
T 2p0v_A 325 PKYGKIYAFEVDGFG-NQLLM-------DDANVPSLIALP-YLGDVKVTDPIYQNTRKFVWSEDNPYFFKGSAGEGIGGP 395 (489)
T ss_dssp TTTEEEECSEECSSS-CEECC-------CCSSSSCSTTHH-HHTSSCTTCHHHHHHHHHHTSTTSTTEEECSSCEEECCT
T ss_pred CCCccEEEEEecCCC-CcccC-------CCCCccHHHHHH-HhCCCCCCCHHHHHHHHHHHhhcCCcccccccccCCCCC
Confidence 5656667653211 00000 01111233 356 56776655456666666665431 11 11233322
Q ss_pred cCC---------------Chhh---H-HHHHH----HHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHHHc
Q 041103 440 LTR---------------SGEQ---C-NYVAY----KETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEF 496 (516)
Q Consensus 440 l~~---------------sgqQ---~-n~~~y----~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~y 496 (516)
-.. ++.. . ...-. ..+|.|.|-+|+.++.. |.. .-|+|+|+.+..++-+|
T Consensus 396 H~~~~~~Wpmsll~~alts~d~~E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~------~TR-~wFaWanslF~e~il~l 468 (489)
T 2p0v_A 396 HIGYDMIWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKN------FTR-AWFAWQNTLFGELILKL 468 (489)
T ss_dssp TTCTTEECHHHHHHHHHTCCCHHHHHHHHHHHHHTSTTSCSCCSEEETTEEEE------EEC-SCBHHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCeeeeeECCCCCCc------CCC-cccHHHHHHHHHHHHHH
Confidence 111 1110 0 00111 12799999999987632 322 56999999988877655
No 10
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=97.21 E-value=0.011 Score=62.36 Aligned_cols=258 Identities=14% Similarity=0.183 Sum_probs=140.3
Q ss_pred eeccccccccCCchHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCC
Q 041103 208 YYWDSYWVISQPPILSAMVYDIYNRTGDFDFV-KKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPES 286 (516)
Q Consensus 208 YYWDSYfi~SQPPlla~mV~~~y~~t~D~~fL-~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPES 286 (516)
+-|.-=|-+..--.+..+.+.||++|+|.+++ ++.+.++++-.+-|....+. +|. .-++|-... .+
T Consensus 154 ~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~------~~~--s~Y~f~R~t--~~--- 220 (463)
T 3p2c_A 154 ELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRK------DGV--GPYKFQRKT--ER--- 220 (463)
T ss_dssp TEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCS------SSS--CSCCCBCCB--SC---
T ss_pred cEEEEecHhhhhhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhcc------CCC--CCceEeecC--CC---
Confidence 35555566655556778889999999998766 45556777777777765432 231 112222111 11
Q ss_pred cchhhhhhcccCCcccccCCCCCCcccccc---c--cchhHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHH
Q 041103 287 STIDKAHSSKLLNASDKENTSDFTTLAITS---I--LPIDLNIFILKMELDIASMAQIV-GDNRTAESFLKTAQARKQAI 360 (516)
Q Consensus 287 yreD~~~A~~~~~~~ek~d~~~l~si~t~~---i--iPVDLNAlLy~~e~~LA~la~~l-G~~~~A~~~~~~A~~rk~aI 360 (516)
..|...-.+..+ +-+..+---+..|.++ + .-|=-|.++....+.+|+|++.+ |+.+.|+++++.|++++++|
T Consensus 221 -~tdtl~~~G~G~-pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI 298 (463)
T 3p2c_A 221 -ALDTVSNDGLGA-PVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETAL 298 (463)
T ss_dssp -GGGSCHHHHTCS-CCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCcccCCCCcCC-CcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 111110001000 0000000001112111 1 12557999999999999999988 66778999999999999999
Q ss_pred HhhcccC--CCCeEEeeeccCCcccchhhhhcccCCCCccchhhH-HHHhhcCCCCchHHHHHHHhhhhhcC---Cc---
Q 041103 361 NSVFWNE--EKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNF-VPIWIDLFNSDTCIVEKVRKGFQSSG---LL--- 431 (516)
Q Consensus 361 n~~lWDe--e~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~-~PLwagia~~~~~~a~~vl~~L~~~~---ll--- 431 (516)
.++.+.+ +-|..|-|-..... .+..+ ....-+|-+ +|+ .|..+.+.+..++.++.+.+.. +.
T Consensus 299 ~k~gvv~~p~~G~iyAyEVDG~G-s~~lm-------DDaNvPSLLslPy-lGf~~~dDpiYqNTrk~IlS~~NPyY~~G~ 369 (463)
T 3p2c_A 299 KKYAVYNHPKYGKIYAFEVDGFG-NHHLM-------DDANVPSLLAMPY-LGDVNVNDPIYQNTRRFVWSEDNPYFFKGK 369 (463)
T ss_dssp HHHSEEEETTTEEEECSEECSSS-CEECC-------CCSSSSCSTTHHH-HTSSCTTCHHHHHHHHHHTSTTSTTEEECS
T ss_pred HHhCEecCCCCceEEEEEEecCC-CccCC-------CCCCchhHHHHHH-cCCCCCCCHHHHHHHHHHHhccCCceeccC
Confidence 9999996 33667777653211 00000 111223333 454 4665554455666666664431 11
Q ss_pred ccceeeeccCCCh--------hh----------H-HHHHH----HHhCcccccccccccccCCCCCccCCCCCccccHHH
Q 041103 432 GAAGIATSLTRSG--------EQ----------C-NYVAY----KETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGA 488 (516)
Q Consensus 432 ~~gGIpTsl~~sg--------qQ----------~-n~~~y----~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV 488 (516)
.-.||-.+-...| .| . ..... ..+|.|.|-+|+.++. .|.. .-|.|.|+.
T Consensus 370 ~~~GiG~PH~~~~~~Wpmsll~~~lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~------~~TR-~WFaWaNs~ 442 (463)
T 3p2c_A 370 AGEGIGGPHIGYDMVWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPK------KFTR-AWFAWQNTL 442 (463)
T ss_dssp SCEEECCTTTCTTEECHHHHHHHHHTCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEE------EEEC-SCBHHHHHH
T ss_pred ccccCCCCCCCCCCchHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCC------cCCC-CchhhhhHH
Confidence 1123333211111 01 0 01111 1279999999998763 2333 569999999
Q ss_pred HHHHHHHc
Q 041103 489 VLAFLEEF 496 (516)
Q Consensus 489 ~L~ll~~y 496 (516)
+..++-++
T Consensus 443 F~elil~l 450 (463)
T 3p2c_A 443 FGELILKL 450 (463)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87776544
No 11
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=96.88 E-value=0.027 Score=58.96 Aligned_cols=258 Identities=16% Similarity=0.172 Sum_probs=139.6
Q ss_pred eeccccccccCCchHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCC
Q 041103 208 YYWDSYWVISQPPILSAMVYDIYNRTGDFDFV-KKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPES 286 (516)
Q Consensus 208 YYWDSYfi~SQPPlla~mV~~~y~~t~D~~fL-~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPES 286 (516)
+-|.-=|-+..--.+..+.+.||++|+|.+++ ++.+.++++-.+-|...++... .+ -++|-.. +.+
T Consensus 126 ~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~----~s----~Y~f~R~--t~~--- 192 (427)
T 3qt9_A 126 WVWERKYEIDSLCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHRE----KS----DYSFQRL--NCS--- 192 (427)
T ss_dssp TEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHH----HC----CCCCBCS--SSC---
T ss_pred ceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCC----CC----CceEecc--CCC---
Confidence 35555566655557778889999999987655 3445566666666666543210 11 1222111 111
Q ss_pred cchhhhhhcccCCcccccCCCCCCcccccc---c--cchhHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHH
Q 041103 287 STIDKAHSSKLLNASDKENTSDFTTLAITS---I--LPIDLNIFILKMELDIASMAQIV-GDNRTAESFLKTAQARKQAI 360 (516)
Q Consensus 287 yreD~~~A~~~~~~~ek~d~~~l~si~t~~---i--iPVDLNAlLy~~e~~LA~la~~l-G~~~~A~~~~~~A~~rk~aI 360 (516)
..|...-.+..+ +-+..+---+..|.++ + .-|=-|.++....+.+|+|++.+ ++.+.|+++++.|++++++|
T Consensus 193 -~tdtl~~~G~G~-pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~aI 270 (427)
T 3qt9_A 193 -VTDTLSHEGLGT-PVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNAI 270 (427)
T ss_dssp -GGGSCHHHHTCS-CCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCccccCCCCCC-CcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 011100000000 0000000001111111 1 12557999999999999999998 67779999999999999999
Q ss_pred HhhcccCC--CCeEEeeeccCCcccchhhhhcccCCCCccchhh-HHHHhhcCCCCchHHHHHHHhhhhhcC---Cc---
Q 041103 361 NSVFWNEE--KGQWLDYWISNGTSSQECRRWKASNQNNNAFASN-FVPIWIDLFNSDTCIVEKVRKGFQSSG---LL--- 431 (516)
Q Consensus 361 n~~lWDee--~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~-~~PLwagia~~~~~~a~~vl~~L~~~~---ll--- 431 (516)
.++...+. -|--|-|....-. .+..+ ....-+|- .+|++ |..+.+.+..++..+.+.+.. +.
T Consensus 271 ~k~gvv~~p~~G~iyAyEVDG~G-s~~lM-------DDaNvPSLLslPyl-Gf~~~dDpiYqNTrk~IlS~~NPyy~~G~ 341 (427)
T 3qt9_A 271 EKHGKVYKEGFGEVYAYETDGMG-NYNFM-------DDANVPSLLSIPYL-EYKGIEDEVYQNTRKFILSKNNRFFFEGK 341 (427)
T ss_dssp HHHSEEEETTTEEEECSEECSSS-CEECC-------CCSSSSCSTTHHHH-TSSCTTCHHHHHHHHHHTSTTSTTEEECS
T ss_pred HHhcEecCCCcceEEEEEeccCC-Ccccc-------CCCCchhHHHHHHc-CCCCCCCHHHHHHHHHHhcccCCceeccC
Confidence 99999873 3567777653211 00000 01122333 35555 555544345566666654421 11
Q ss_pred ccceeeeccCCChhh---------------------HHHHHH----HHhCcccccccccccccCCCCCccCCCCCccccH
Q 041103 432 GAAGIATSLTRSGEQ---------------------CNYVAY----KETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSN 486 (516)
Q Consensus 432 ~~gGIpTsl~~sgqQ---------------------~n~~~y----~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTN 486 (516)
.-.||-.+- +|.. ...... ..+|.|.|-+|+.++. .|.. .-|.|.|
T Consensus 342 ~~~GIG~PH--~~~~~~Wpmsl~~~~lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~------~~TR-~WFaWaN 412 (427)
T 3qt9_A 342 AAKGIGSPH--TPDQYIWHIALSMQGLTTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPT------KFTR-DWFAWSN 412 (427)
T ss_dssp SCEEECCTT--SCTTEEEHHHHHHHHHTCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEE------EESC-SCBHHHH
T ss_pred ccCcCCCCC--CCCCCchHHHHHHHHhhcCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCC------ccCC-Ccchhhh
Confidence 112333321 1111 011111 1279999999998763 2332 5699999
Q ss_pred HHHHHHHHHcCC
Q 041103 487 GAVLAFLEEFGW 498 (516)
Q Consensus 487 GV~L~ll~~yg~ 498 (516)
+.+-.++-++-.
T Consensus 413 ~lF~elil~l~~ 424 (427)
T 3qt9_A 413 SLFSHFIYEKVI 424 (427)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 998888766544
No 12
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=96.43 E-value=0.009 Score=66.71 Aligned_cols=107 Identities=10% Similarity=-0.003 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCC-----CCeEEeeeccCCcccchhhhhc----
Q 041103 320 IDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEE-----KGQWLDYWISNGTSSQECRRWK---- 390 (516)
Q Consensus 320 VDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee-----~G~y~Dydl~~~~~~~~~y~~~---- 390 (516)
+-.++++|......++||+.+|+.+.+++|++.|++++++|++.+||++ .+.|.-.....+......+..+
T Consensus 445 ~~t~~~~~~aL~~~a~lA~~~g~~~~a~~~~~~a~~i~~~i~~~~w~~~~~~g~~~~f~r~~~d~~~~~~~~~~~~~~~~ 524 (684)
T 1lf6_A 445 PATMAAEVAGLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGG 524 (684)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCCCcccccCCeeEEEeccCCCccccccccccccc
Confidence 4567799999999999999999999999999999999999999999998 6776543221111000000000
Q ss_pred ccCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhh
Q 041103 391 ASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQ 426 (516)
Q Consensus 391 ~~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~ 426 (516)
........-++.+.+.+.|+.+++..++.+.++.+.
T Consensus 525 ~~~~~~~lDas~l~~~~~G~~~~~dpr~~~Tl~~i~ 560 (684)
T 1lf6_A 525 VYDQKEIVDPSFLELVRLGVKSADDPKILNTLKVVD 560 (684)
T ss_dssp EEEGGGCCCGGGGHHHHTTSSCTTCHHHHHHHHHHH
T ss_pred cCCCCCcEeHHHhHHHhcCCcCCCCHHHHHHHHHHH
Confidence 000123355666788889998865446665555543
No 13
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=96.12 E-value=0.091 Score=54.97 Aligned_cols=256 Identities=14% Similarity=0.175 Sum_probs=136.2
Q ss_pred eccccccccCCchHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCCc
Q 041103 209 YWDSYWVISQPPILSAMVYDIYNRTGDFDFV-KKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESS 287 (516)
Q Consensus 209 YWDSYfi~SQPPlla~mV~~~y~~t~D~~fL-~~~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPESy 287 (516)
-|.-=|-+..--.+..+.+.||++|+|.+++ ++.+.++++-.+-|...++.. .+ -++|-... .++
T Consensus 126 v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq~~~-----~s----~Y~f~R~t--~~~--- 191 (426)
T 3qry_B 126 IWERKYEVDSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDHK-----NS----PYRFVRDT--DRK--- 191 (426)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTSGG-----GC----CCCCEECC--SCG---
T ss_pred eEeeccHHhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccC-----CC----CceeeecC--CCC---
Confidence 4444555544556778889999999987765 455566666667666654320 11 12222111 110
Q ss_pred chhhhhhcccCCcccccCCCCCCcccccc---c--cchhHHHHHHHHHHHHHHHHHH---hCCchhHHHHHHHHHHHHHH
Q 041103 288 TIDKAHSSKLLNASDKENTSDFTTLAITS---I--LPIDLNIFILKMELDIASMAQI---VGDNRTAESFLKTAQARKQA 359 (516)
Q Consensus 288 reD~~~A~~~~~~~ek~d~~~l~si~t~~---i--iPVDLNAlLy~~e~~LA~la~~---lG~~~~A~~~~~~A~~rk~a 359 (516)
.|...-.+..+ +-+..+---+..|.++ + .-|=-|.++....+.+|+|++. .|+.+.|+++++.|++++++
T Consensus 192 -tdtl~~~G~G~-pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~~~~la~eIr~~ 269 (426)
T 3qry_B 192 -EDTLVNDGFGP-DFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEG 269 (426)
T ss_dssp -GGSCHHHHTCS-CCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHH
T ss_pred -CccccCCCCCC-CcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHH
Confidence 11110000000 0000000001111111 1 1255799999999999999983 48888899999999999999
Q ss_pred HHhhcccCC--CCeEEeeeccCCcccchhhhhcccCCCCccchhhH-HHHhhcCCCCchHHHHHHHhhhhhcC---Cc--
Q 041103 360 INSVFWNEE--KGQWLDYWISNGTSSQECRRWKASNQNNNAFASNF-VPIWIDLFNSDTCIVEKVRKGFQSSG---LL-- 431 (516)
Q Consensus 360 In~~lWDee--~G~y~Dydl~~~~~~~~~y~~~~~~~~~~~~~s~~-~PLwagia~~~~~~a~~vl~~L~~~~---ll-- 431 (516)
|.++...+. -|--|-|....-. .+..+ ....-+|-+ +|+ .|..+.+.+.-++..+.+.+.. +.
T Consensus 270 I~k~gvv~h~~~g~iyAyEVDG~G-s~~lm-------DDaNvPSLLslPy-lGf~~~dDpiYqNTrk~IlS~~NPyy~~G 340 (426)
T 3qry_B 270 IKNYAYTTNSKGEKIYAFEVDGLG-NASIM-------DDPNVPSLLAAPY-LGYCSVDDEVYQATRRTILSSENPYFYQG 340 (426)
T ss_dssp HHHHSEEECTTCCEEECSEECSSS-CBCCC-------CCSSSSCSTTTTT-TTSSCTTCHHHHHHHHHHTSTTSTTEEEC
T ss_pred HHHhcEecCCCcceEEEEEeccCC-Ccccc-------CCCCchhHHHHHH-cCCCCCCCHHHHHHHHHHhcccCCceecc
Confidence 999999874 3566777653211 00000 011223333 444 4565544455566666654421 11
Q ss_pred -ccceeeeccCCCh--------hh-----------HHHHHHH----HhCcccccccccccccCCCCCccCCCCCccccHH
Q 041103 432 -GAAGIATSLTRSG--------EQ-----------CNYVAYK----ETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNG 487 (516)
Q Consensus 432 -~~gGIpTsl~~sg--------qQ-----------~n~~~y~----~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNG 487 (516)
.-.||-++-...+ .| ....... .+|.|.|-+|+.++. .|.. .=|.|.|+
T Consensus 341 ~~~~GiG~PH~~~~~~Wpmsl~~~~lTs~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~------~~TR-~WFaWaN~ 413 (426)
T 3qry_B 341 EYASGLGSSHTFYRYIWPIALSIQGLTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPT------LYSR-EWFSWANM 413 (426)
T ss_dssp SSCEEECCTTSCTTEECHHHHHHHHHTCSCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEE------EEEC-SCCHHHHH
T ss_pred CccCcCCCCCCCCCCchHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCC------ccCC-CchhhhhH
Confidence 1123333211110 01 0111111 279999999998763 3333 45999999
Q ss_pred HHHHHHHHc
Q 041103 488 AVLAFLEEF 496 (516)
Q Consensus 488 V~L~ll~~y 496 (516)
++-.++-++
T Consensus 414 lF~elil~~ 422 (426)
T 3qry_B 414 MFCELVLDY 422 (426)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988776543
No 14
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=96.09 E-value=0.015 Score=67.80 Aligned_cols=104 Identities=10% Similarity=0.009 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCC-----CCeEEeeeccCCccc-chhhhhccc-
Q 041103 320 IDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEE-----KGQWLDYWISNGTSS-QECRRWKAS- 392 (516)
Q Consensus 320 VDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee-----~G~y~Dydl~~~~~~-~~~y~~~~~- 392 (516)
+=-++..|.+....++||+.+|+.+.+++|++.|+++++.|++.+||++ .|.|.-.....+... ...+ ..+
T Consensus 437 ~~t~~~~~~AL~~aa~lA~~~G~~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~~~~g~f~r~~~dg~~~~~~~~~--~~n~ 514 (1020)
T 1ulv_A 437 TSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRD--WGNG 514 (1020)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEE--CSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHhCCCCcccccccCeeEEEecCCCcccccccc--cccc
Confidence 3456889999999999999999999999999999999999999999998 777764432211100 0000 000
Q ss_pred ----CCCCccchhhHHHHhhcCCCCchHHHHHHHhhh
Q 041103 393 ----NQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGF 425 (516)
Q Consensus 393 ----~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L 425 (516)
.......++.+..+++|+.+++..++.+.++.+
T Consensus 515 ~~~~~~~~~lDas~l~l~~~G~~~~~dpr~~~Tl~~i 551 (1020)
T 1ulv_A 515 AGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAET 551 (1020)
T ss_dssp CCEEEGGGCCBGGGGHHHHTTSSCTTCHHHHHHHHHH
T ss_pred cccCCCCCeeeHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 023345567777778999876544554444433
No 15
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=86.41 E-value=2 Score=45.96 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh---cccCCCCeEE
Q 041103 322 LNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSV---FWNEEKGQWL 373 (516)
Q Consensus 322 LNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~---lWDee~G~y~ 373 (516)
=.+..+......++||+.+|+.+.++.|++.|+++++.|.+. +||++.|.|.
T Consensus 219 T~~~~~~AL~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~~~~~~w~~~~~~f~ 273 (492)
T 2fba_A 219 TSLVQQKALAYAVDIAKSFDDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIV 273 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHSTTTCCEETTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEE
Confidence 345667778888999999999999999999999999999988 9999888774
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=85.53 E-value=2.9 Score=45.77 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeee
Q 041103 323 NIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYW 376 (516)
Q Consensus 323 NAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dyd 376 (516)
.+..+......++||+.+|+. +..|++.|+++++.| +.+||++ |.|.-..
T Consensus 189 ~~~~~~aL~~aa~lA~~~g~~--~~~w~~~ad~i~~~i-~~~w~~~-g~f~~~~ 238 (599)
T 2vn4_A 189 VANQHRALVEGATLAATLGQS--GSAYSSVAPQVLCFL-QRFWVSS-GGYVDSN 238 (599)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHHHHHHH-GGGEETT-TTEECSE
T ss_pred HHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHH-HhhcCCC-CCEEEEe
Confidence 466778888899999999987 788999999999999 8899998 8887654
No 17
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=82.21 E-value=5 Score=45.42 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHhcCccccccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccCC
Q 041103 221 ILSAMVYDIYNRTGDFDFVKK-ALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLN 299 (516)
Q Consensus 221 lla~mV~~~y~~t~D~~fL~~-~lP~L~kEy~fW~~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~~ 299 (516)
.++..++.+|+.|+|++||++ .+|.|..--+||.+--. .+.+|. |.-. .+--||-|-.. . ....
T Consensus 452 wla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~----~~~~g~------y~i~-p~~sPE~~~~~-~-g~~~-- 516 (803)
T 2rdy_A 452 WLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLI----ENEAGY------LVTS-PSTSPEQRFRI-G-EKGY-- 516 (803)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCE----ECTTSC------EECS-SBCBTTBCEEE-T-TEEE--
T ss_pred HHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhE----ECCCCc------EEEC-CCCcccccccC-C-Cccc--
Confidence 556778888999999999998 79998888899987533 133452 2111 11114433100 0 0000
Q ss_pred cccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHhCCch-hHHHHHHHHHHHH
Q 041103 300 ASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNR-TAESFLKTAQARK 357 (516)
Q Consensus 300 ~~ek~d~~~l~si~t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~-~A~~~~~~A~~rk 357 (516)
....-+.-=|+++....+...+++++||..+ ..++|++.++++.
T Consensus 517 --------------~~~~n~tytn~~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~~~~L~ 561 (803)
T 2rdy_A 517 --------------AVSSATTMDLSLIAECFDNCIQAAKRLSIDEDFVKALSDAKQRLL 561 (803)
T ss_dssp --------------CCBSCCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTBC
T ss_pred --------------ccccChHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHhcCC
Confidence 0000123348888888899999999999654 3556666655544
No 18
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=77.16 E-value=5.2 Score=45.86 Aligned_cols=38 Identities=24% Similarity=0.503 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC
Q 041103 220 PILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRI 257 (516)
Q Consensus 220 Plla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R 257 (516)
+.++.+++++|+.|+|++||++.||.|+.--+||.+.+
T Consensus 509 aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~ 546 (899)
T 2eab_A 509 PWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYM 546 (899)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 45667789999999999999888999988899999833
No 19
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=72.42 E-value=11 Score=40.07 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEE
Q 041103 323 NIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWL 373 (516)
Q Consensus 323 NAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~ 373 (516)
.+..+......++||+.+|+. +..|++.|+++++.| +.+|| |.|.
T Consensus 188 ~~~~~~AL~~aa~lA~~~g~~--~~~w~~~ad~I~~~i-~~~w~---g~f~ 232 (472)
T 1gai_A 188 IAVQHRALVEGSAFATAVGSS--CSWCDSQAPQILCYL-QSFWT---GSYI 232 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHH-GGGBC---SSSB
T ss_pred HHHHHHHHHHHHHHHHHcCCc--HHHHHHHHHHHHHHH-HhhcC---CceE
Confidence 466778888899999999987 788999999999999 88998 5554
No 20
>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*
Probab=42.98 E-value=10 Score=42.43 Aligned_cols=41 Identities=17% Similarity=0.162 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHhhcccCCCCeEEee
Q 041103 330 ELDIASMAQIVGD-NRTAESFLKTAQARKQAINSVFWNEEKGQWLDY 375 (516)
Q Consensus 330 e~~LA~la~~lG~-~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dy 375 (516)
--.||++|+.||+ .++++.|.+||...| -+||++.|++.-.
T Consensus 452 D~~iaq~Ak~LGk~~~d~~~y~~Rs~nyr-----nlfd~~tgf~rpr 493 (744)
T 2wvx_A 452 DWCIYRLAKELKRPKKEISLFAKRAMNYK-----NLFDKESKLMRGR 493 (744)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHTTGGG-----GGEETTTTEECCB
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHH-----HhCCCccCccccc
Confidence 4489999999999 999999999998776 4799999876533
No 21
>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*
Probab=42.68 E-value=8.5 Score=43.13 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeee
Q 041103 329 MELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYW 376 (516)
Q Consensus 329 ~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dyd 376 (516)
.--.||++|+.||++++++.|.+||...| -+||++.|++.-.+
T Consensus 454 ~D~~iaq~Ak~LGk~~d~~~y~~Rs~ny~-----n~fd~~tgf~rpr~ 496 (737)
T 2ww2_A 454 ADWCIARFAESLGKQDIADQYYQKAPNYR-----NLYYPEHGFMWTKD 496 (737)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTGGGGG-----GGEETTTTEECCBC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhHH-----HhCCCccCcccccC
Confidence 44589999999999999999999988776 47999999876543
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=41.82 E-value=33 Score=34.65 Aligned_cols=46 Identities=20% Similarity=0.293 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCc
Q 041103 332 DIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGT 381 (516)
Q Consensus 332 ~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~ 381 (516)
.+..+++..|+. .|.++|.+..+.+.+.|||++.|.||+.--.+++
T Consensus 322 a~l~ly~~tgd~----~yl~~a~~~~~~~~~~f~D~~~G~w~~~~~~~g~ 367 (402)
T 1fp3_A 322 AFLMGYSESGDP----ALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGK 367 (402)
T ss_dssp HHHHHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCCEECTTSC
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCceEeeECCCcC
Confidence 355667777864 5888999999999999999999999988766654
No 23
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=36.25 E-value=44 Score=34.04 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEe
Q 041103 320 IDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLD 374 (516)
Q Consensus 320 VDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~D 374 (516)
++=+|++... ++. +...|+. .|.+.|+++.+.|.+.+||++.|.|++
T Consensus 112 lyd~Af~i~a---l~~-~~~tgd~----~~l~~A~~l~~~i~~~f~d~~~G~~~~ 158 (402)
T 3gt5_A 112 CYGLAFVMLA---YSC-GLKVGIK----QAREWMDETWCLLERHFWDAEYGLYKD 158 (402)
T ss_dssp HHHHHHHHHH---HHH-HHHTTCT----THHHHHHHHHHHHHHHTEETTTTEECC
T ss_pred hHHHHHHHHH---HHH-HHHhCCh----hHHHHHHHHHHHHHHHhcCCcCCCchh
Confidence 6667777655 334 3446765 478899999999999999999999985
No 24
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=34.05 E-value=45 Score=33.95 Aligned_cols=45 Identities=13% Similarity=0.136 Sum_probs=37.1
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCc
Q 041103 333 IASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGT 381 (516)
Q Consensus 333 LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~ 381 (516)
+..+++..|+. .|.++|++..+-+.+.|+|.+.|.||++-..+|+
T Consensus 319 ~l~ly~~tgd~----~yl~~a~~~~~~~~~~~~D~~~G~W~~~l~~dg~ 363 (402)
T 3gt5_A 319 AALLATRSGDE----RYWQWYDRLWAYAWQHMVDHRYGAWYRLLDGDNR 363 (402)
T ss_dssp HHHHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTCSBCSEECTTSC
T ss_pred HHHHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCeEEEEECCCCC
Confidence 44566777764 5899999999999999999999999998776664
No 25
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=32.93 E-value=95 Score=30.85 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEe-eec
Q 041103 332 DIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLD-YWI 377 (516)
Q Consensus 332 ~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~D-ydl 377 (516)
.|.++++++|++ .|.+.|++..+.+.+..||++.|..++ .+.
T Consensus 246 lL~~~~~~tgd~----~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~ 288 (388)
T 2gz6_A 246 FIMDIARRKNDS----KTINQAVDVVLNILNFAWDNEYGGLYYFMDA 288 (388)
T ss_dssp HHHHHHHHTTCH----HHHHHHHHHHHHHHHHHBCTTTCSBCSCEET
T ss_pred HHHHHHHHcCCH----HHHHHHHHHHHHHHHHhccCCCCCEEEeecC
Confidence 455667778865 688889888888888899998554443 443
No 26
>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}
Probab=32.45 E-value=22 Score=40.01 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHH-HHHHHHHHhhcccCC
Q 041103 329 MELDIASMAQIVGDNRTAESFLKTA-QARKQAINSVFWNEE 368 (516)
Q Consensus 329 ~e~~LA~la~~lG~~~~A~~~~~~A-~~rk~aIn~~lWDee 368 (516)
.--.||++|+.||+.++++.|.+|| ...|. +||++
T Consensus 464 dD~~iaq~Ak~LGk~~d~~~y~~Rs~~ny~n-----lfd~~ 499 (774)
T 2xsg_A 464 DQYGLSVIADELGLTEEAETLREQASWPIEK-----LTKPG 499 (774)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----HEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhHHH-----hCCch
Confidence 3458999999999999999999999 87763 57877
No 27
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=32.17 E-value=76 Score=35.46 Aligned_cols=35 Identities=26% Similarity=0.516 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHhc
Q 041103 222 LSAMVYDIYNRTGDFDFVKK-ALPALLKEHQFWNSR 256 (516)
Q Consensus 222 la~mV~~~y~~t~D~~fL~~-~lP~L~kEy~fW~~~ 256 (516)
++..++.||+.|+|++||++ .+|.|..--+||.+-
T Consensus 432 ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~ 467 (754)
T 1h54_A 432 IAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADR 467 (754)
T ss_dssp HHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHh
Confidence 66778999999999999986 688887777899875
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=30.59 E-value=42 Score=34.38 Aligned_cols=48 Identities=27% Similarity=0.277 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEee
Q 041103 320 IDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDY 375 (516)
Q Consensus 320 VDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dy 375 (516)
+.-||++.... +. ++..|+. .|.+.|++..+.|.+.+||++.|.||+-
T Consensus 110 lyd~Af~i~al---~~-~~~tg~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~ 157 (421)
T 2zbl_A 110 GYQHFFALLGA---AS-AVTTGHP----EARKLLDYTIEVIEKYFWSEEEQMCLES 157 (421)
T ss_dssp HHHHHHHHHHH---HH-HHTTTCT----THHHHHHHHHHHHHHHTEETTTTEECCE
T ss_pred HHHHHHHHHHH---HH-HHHhCCc----cHHHHHHHHHHHHHHHhccCCCCCeeee
Confidence 56677776643 44 5666765 5788889999999999999988888764
No 29
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=26.66 E-value=70 Score=32.20 Aligned_cols=47 Identities=4% Similarity=0.002 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEE-eeecc
Q 041103 328 KMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWL-DYWIS 378 (516)
Q Consensus 328 ~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~-Dydl~ 378 (516)
.+...|++++++.|+. .|.+.|.+--..+.+.++|+++|.|+ .|+..
T Consensus 147 m~~p~L~~l~~~tgd~----~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~ 194 (373)
T 1nc5_A 147 MGGPFALKYANLKQET----ELFDQVVLQESLMRKHTKDAKTGLFYHAWDEA 194 (373)
T ss_dssp HHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHHHHBCTTTSCBCSEEETT
T ss_pred HHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHhcCCCCCCEEeecCCc
Confidence 3445689999999986 46777777777777889999999996 45543
No 30
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=26.36 E-value=82 Score=32.18 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=38.0
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCcc
Q 041103 332 DIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTS 382 (516)
Q Consensus 332 ~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~ 382 (516)
.+..+++..|+. .|.++|++..+.+.+.|+|.+.|.||++-...|++
T Consensus 324 all~l~~~tgd~----~yl~~a~~~~~~~~~~~~d~~~G~w~~~l~~~g~~ 370 (421)
T 2zbl_A 324 TAYALYTLTDDS----QYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKV 370 (421)
T ss_dssp HHHHHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCSEECTTSCB
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHHHHHHhCCCCCCCeeEeeECcCcCC
Confidence 345566677864 68899999999999999999999999987766653
No 31
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=25.56 E-value=71 Score=32.07 Aligned_cols=47 Identities=15% Similarity=0.090 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeee
Q 041103 322 LNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYW 376 (516)
Q Consensus 322 LNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dyd 376 (516)
-|+.+. ..++++++..|++ .|.+.|++.-+-|.+.|.|++ |.++|-.
T Consensus 151 sN~~~~---~~la~l~~~tgd~----~Yl~~A~~~~~w~~~~l~d~~-g~v~Dg~ 197 (349)
T 3k7x_A 151 VNAPFI---ILSCWLYNELNET----KYLEWAMKTYEWQTKVLVRED-GFVEDGI 197 (349)
T ss_dssp HHHHHH---HHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHBCTT-SCBCCEE
T ss_pred hHHHHH---HHHHHHHHHhCCH----HHHHHHHHHHHHHHhcCCCCC-CeEecCC
Confidence 577765 5567888888875 588999999999988999987 8888754
No 32
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Probab=22.22 E-value=48 Score=37.85 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=37.4
Q ss_pred CcCCCCCChhHHHHHHHHHHhhhccccc-cccccccC-----CCccccccC---CCCcccCC-CCCcceeeccc
Q 041103 149 GFLPKVKNPQVRAWALEVHALWKNLSRR-VSGSVLDR-----LEFHTLLLL---PGPIVIPS-SRFREVYYWDS 212 (516)
Q Consensus 149 ~~l~~i~d~~~r~~a~~i~~lW~~L~R~-~~~~v~~~-----p~~~sli~l---p~pfiVPG-GRFrE~YYWDS 212 (516)
.-+++.+.|-|+.||.+||+.|+.=+-- +-..+... |..-=++|+ |-+.+-|+ ..=.||.-|=+
T Consensus 629 ~~Idr~q~P~L~~wA~~IH~~WP~Psqi~yGapi~GSANLFtpp~~LllP~~~~P~~~~~~tl~~dneM~~W~~ 702 (1214)
T 3iyl_X 629 QLINPQQAPLLRAFAEHIRANWPQPSEFGYGSTLQGSANLFIPSNRMVYPWPNQPLPRLTVAPTYDSAMSNWIS 702 (1214)
T ss_dssp TSSCTTTCHHHHHHHHHHHHHSCCCEEEECSCGGGCCCCSSSCTTEEEESSCCCCCCSSCCCCCSCSHHHHHHH
T ss_pred cccChhhCHHHHHHHHHHHHhCCCCccccCCCcccccccccCCCCceEccCCCCCCccccccccchhHHHHHHH
Confidence 3566788999999999999999964321 00001111 111123344 33456666 35578888843
No 33
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=21.80 E-value=1.1e+02 Score=30.32 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=35.5
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCc
Q 041103 333 IASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGT 381 (516)
Q Consensus 333 LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~ 381 (516)
++.+++..|+. .|.++|.+..+-+.+.++|++.|.||++--..++
T Consensus 313 ~~~ly~~tgd~----~yl~~a~~~~~~~~~~~~D~~~G~w~~~l~~~g~ 357 (388)
T 2gz6_A 313 LAMGYRLTGRD----ACWAWYQKMHDYSWQHFADPEYGEWFGYLNRRGE 357 (388)
T ss_dssp HHHHHHHHCCH----HHHHHHHHHHHHHHHHHBCTTTSSBCCEECTTSC
T ss_pred HHHHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCceEEeeCCCcC
Confidence 34556677864 5888888888989899999999999998766554
No 34
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=20.73 E-value=56 Score=25.27 Aligned_cols=26 Identities=12% Similarity=0.266 Sum_probs=23.4
Q ss_pred CHHHHHHHHhcCCccCCCCCChHHHHH
Q 041103 96 GLSTTVTAFHKLPRNASESVSAPDFKE 122 (516)
Q Consensus 96 ~~~~il~~f~~l~~~~~~~~~~~~l~~ 122 (516)
+.++|.++|+.+ +..++.++..+|++
T Consensus 8 ~~eel~eAFr~f-~dg~G~It~~eLr~ 33 (75)
T 1h8b_A 8 TAEQVIASFRIL-ASDKPYILAEELRR 33 (75)
T ss_dssp THHHHHHHHHHH-TTSCSSBCHHHHHH
T ss_pred CHHHHHHHHHHH-hcCCCCcCHHHHHh
Confidence 678999999999 77888899999998
Done!