Query 041105
Match_columns 403
No_of_seqs 249 out of 1791
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 03:50:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041105.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041105hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11910 amidase; Provisional 100.0 5.9E-82 1.3E-86 663.2 37.7 338 32-402 156-496 (615)
2 PRK08137 amidase; Provisional 100.0 9.3E-81 2E-85 650.6 35.9 349 37-399 2-355 (497)
3 PRK06707 amidase; Provisional 100.0 1.4E-80 3E-85 651.1 36.0 346 37-399 67-418 (536)
4 PRK06828 amidase; Provisional 100.0 2.4E-80 5.2E-85 644.9 36.2 352 39-401 11-371 (491)
5 PRK06565 amidase; Validated 100.0 9.5E-80 2.1E-84 642.1 33.0 355 36-402 2-407 (566)
6 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 1.2E-79 2.6E-84 636.2 30.7 300 37-352 3-306 (475)
7 PRK07487 amidase; Provisional 100.0 3.6E-78 7.9E-83 626.9 34.8 317 38-381 5-328 (469)
8 PRK00012 gatA aspartyl/glutamy 100.0 1.6E-78 3.4E-83 628.2 32.0 309 50-379 1-310 (459)
9 TIGR00132 gatA glutamyl-tRNA(G 100.0 3.2E-78 6.9E-83 626.1 31.9 307 46-378 1-308 (460)
10 PRK06169 putative amidase; Pro 100.0 6.9E-78 1.5E-82 624.4 33.7 296 38-349 4-301 (466)
11 PRK07486 amidase; Provisional 100.0 1.2E-77 2.5E-82 625.4 34.2 300 36-349 7-309 (484)
12 PRK07488 indole acetimide hydr 100.0 1.6E-77 3.5E-82 622.6 35.0 312 37-383 7-319 (472)
13 PRK06170 amidase; Provisional 100.0 2.1E-77 4.5E-82 624.4 33.8 302 36-355 7-318 (490)
14 PRK07042 amidase; Provisional 100.0 3E-77 6.5E-82 619.3 34.3 296 38-352 4-300 (464)
15 PRK09201 amidase; Provisional 100.0 2.6E-77 5.7E-82 619.8 32.5 297 38-353 4-302 (465)
16 PRK06102 hypothetical protein; 100.0 6.7E-77 1.5E-81 614.8 34.0 290 38-356 3-296 (452)
17 TIGR02715 amido_AtzE amidohydr 100.0 4.4E-77 9.6E-82 616.2 31.6 283 42-338 1-285 (452)
18 PRK07056 amidase; Provisional 100.0 1.1E-76 2.3E-81 613.6 33.4 288 41-356 6-300 (454)
19 PF01425 Amidase: Amidase; In 100.0 2.4E-77 5.3E-82 607.5 21.4 285 59-356 1-287 (441)
20 PRK12470 amidase; Provisional 100.0 2.5E-75 5.5E-80 604.4 31.1 288 38-349 6-296 (462)
21 PRK07869 amidase; Provisional 100.0 2.7E-75 5.8E-80 605.4 29.5 288 37-350 11-300 (468)
22 PRK06529 amidase; Provisional 100.0 1.2E-74 2.7E-79 602.4 34.3 313 39-378 2-319 (482)
23 PRK08186 allophanate hydrolase 100.0 1.3E-74 2.9E-79 613.8 33.1 316 39-381 5-322 (600)
24 PRK06061 amidase; Provisional 100.0 1.9E-74 4.1E-79 600.9 31.6 295 37-349 14-312 (483)
25 PRK05962 amidase; Validated 100.0 2.2E-73 4.8E-78 584.2 31.0 262 62-351 2-265 (424)
26 PRK07235 amidase; Provisional 100.0 2E-73 4.4E-78 594.9 26.5 302 36-352 20-322 (502)
27 TIGR02713 allophanate_hyd allo 100.0 2.1E-67 4.6E-72 554.2 28.6 282 76-381 2-285 (561)
28 PRK07139 amidase; Provisional 100.0 1.7E-65 3.7E-70 527.9 28.1 254 59-350 6-259 (439)
29 KOG1211 Amidases [Translation, 100.0 6.3E-65 1.4E-69 518.5 18.9 294 50-355 27-321 (506)
30 PRK08310 amidase; Provisional 100.0 9.4E-64 2E-68 508.7 25.6 234 72-349 4-239 (395)
31 PLN02722 indole-3-acetamide am 100.0 2.7E-62 5.8E-67 501.4 23.5 237 72-349 4-243 (422)
32 KOG1212 Amidases [Translation, 100.0 2.1E-59 4.6E-64 481.9 23.9 304 36-357 50-361 (560)
33 COG1797 CobB Cobyrinic acid a, 54.8 34 0.00073 35.8 6.6 35 302-344 242-276 (451)
34 COG2306 Predicted RNA-binding 48.9 8.9 0.00019 34.8 1.2 40 19-65 108-147 (183)
35 PF14359 DUF4406: Domain of un 39.3 33 0.00072 27.9 3.1 28 321-348 11-38 (92)
36 PF11268 DUF3071: Protein of u 32.5 63 0.0014 29.5 4.0 63 6-71 24-89 (170)
37 COG4152 ABC-type uncharacteriz 23.4 2.9E+02 0.0063 27.2 6.9 121 234-358 53-197 (300)
38 COG3603 Uncharacterized conser 22.9 61 0.0013 27.8 2.0 18 326-343 110-127 (128)
39 PF10432 bact-PGI_C: Bacterial 20.7 4E+02 0.0088 23.5 7.0 82 304-395 71-152 (155)
40 PF04412 DUF521: Protein of un 20.5 98 0.0021 32.1 3.4 140 243-395 248-399 (400)
41 PF14237 DUF4339: Domain of un 20.2 35 0.00077 23.6 0.1 24 38-61 11-34 (45)
No 1
>PRK11910 amidase; Provisional
Probab=100.00 E-value=5.9e-82 Score=663.20 Aligned_cols=338 Identities=36% Similarity=0.609 Sum_probs=303.8
Q ss_pred CCcccccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCC---CccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCC
Q 041105 32 ESREFSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNP---LLRGVIEVNPDAINQADKADQERKAKAPRSQLGLH 108 (403)
Q Consensus 32 ~~~~~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~---~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~ 108 (403)
......+.+.++.+|++++++|++|++|++++||+||+++|+ .+|||++++++++++|+++|+++ ..+ +||||
T Consensus 156 ~~~~~~i~~~ti~~L~~~l~~g~lT~~elv~a~L~RI~~~n~~g~~LnA~i~~~~~Al~~A~~lD~~~--~~~--~gPL~ 231 (615)
T PRK11910 156 EAKEPLIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNGLNLNAITEINPTIIAEAEQLDKEN--TTN--KSALY 231 (615)
T ss_pred CcccccchhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCceeEEEEcCHHHHHHHHHHHHHh--ccC--CCCcC
Confidence 344456788999999999999999999999999999999997 79999999999999999999987 444 49999
Q ss_pred CCceeecccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCC
Q 041105 109 GIPILVKDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYV 188 (403)
Q Consensus 109 GvPi~vKD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~ 188 (403)
||||+|||||+++| |+||+||.++.++++.+||++|+|||+|||||+|||||+||+++.+..+.++||++||+|+||||
T Consensus 232 GIPv~VKDni~t~G-~pTTaGS~al~~~~p~~DA~vV~rLr~AGAIIlGKTNm~EfA~~~~~~~~~g~s~~~G~t~NP~~ 310 (615)
T PRK11910 232 GMPVLLKDNIGTKE-LPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAAGMDEDLPNGYSGKKGQSKNPYS 310 (615)
T ss_pred CCEEEEEcCcccCC-CccCcccHhhcCCCCCCCHHHHHHHHHCCCEEEEEeCcchhhhCCCCCCCCCCCCCCCCcCCCCC
Confidence 99999999999996 99999999999999999999999999999999999999999986665457899999999999999
Q ss_pred CCCCCCCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHH
Q 041105 189 LSADPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYV 268 (403)
Q Consensus 189 ~~~~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~ 268 (403)
+.|+|||||||||++||+|++++|+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||+|+|++.+
T Consensus 311 ~~r~pGGSSsGSAAAVAaG~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~slDtvGPmaRsV~D~a~l 390 (615)
T PRK11910 311 SNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLT 390 (615)
T ss_pred CCCCCCCCCchHHHHHhcCCceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCcCCCCeeccccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCC
Q 041105 269 LDAIVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEI 348 (403)
Q Consensus 269 ~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~ 348 (403)
+++|.|.+..++ + ....++++||||+.+. .++++.++++++++.|+++|++|++.+++
T Consensus 391 l~vi~g~~~~~~-------------l----~~~~lkglRIGv~~~~-----~~~~v~~a~~~a~~~L~~~Ga~Vve~~~~ 448 (615)
T PRK11910 391 TNALTNTTSNPP-------------L----STDALKGKRIGLLADG-----ESNEETAVIKKIKLDLQKAGATIIEGIAV 448 (615)
T ss_pred HHHhcCCCCcCc-------------c----CcccCCCCEEEEECCC-----CCHHHHHHHHHHHHHHHHCCCEEEeCCCC
Confidence 999999765331 1 1135788999998652 47889999999999999999999986677
Q ss_pred CCHHHHHHhhhcccchhccHHHHHHHHHHHHhhcCCCCCCCHHHHHHhhhhCCC
Q 041105 349 NNLEAILNSIANGETLAILAAEFKQALNAYLQELVTSPVRSLADVIAFNKMFPE 402 (403)
Q Consensus 349 p~~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~~~~~~sl~~~i~~~~~~~e 402 (403)
|.++.... .+..++ .+|+..++..||+.. ..++++|+|+++||++||+
T Consensus 449 p~~~~~~~----~~~~l~-~~E~~~~l~~yl~~~-~~~v~sL~dl~~fn~~~~~ 496 (615)
T PRK11910 449 GEFEQKDT----DYASLL-NADFKHDLNQFLQVN-HSPMSTLESIIQFNQTNPT 496 (615)
T ss_pred ccHHHHHH----HHHHHH-HHHHHHHHHHHHHhc-CCCCCCHHHHHHHHhcCcc
Confidence 77665443 245666 899999999999754 5679999999999999983
No 2
>PRK08137 amidase; Provisional
Probab=100.00 E-value=9.3e-81 Score=650.58 Aligned_cols=349 Identities=47% Similarity=0.739 Sum_probs=302.7
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHH---CCCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCcee
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRL---NPLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPIL 113 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~---~~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~ 113 (403)
+++++++.+|+++|++|++|++|++++||+||+++ |+.+|+|++++++++++|+++|+++ ++|+.+||||||||+
T Consensus 2 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~~~~lna~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~ 79 (497)
T PRK08137 2 TALEERAGALQAAMPAGAAPASQLTRAYLQRIARIDRDGPRLNAVIELNPDAEADAAALDAER--KAGKVRGPLHGIPVL 79 (497)
T ss_pred chhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCCCceeEEEEeCHHHHHHHHHHHHHH--hcCCCCCCcCCceee
Confidence 56788999999999999999999999999999987 5789999999988999999999988 788889999999999
Q ss_pred eccccccc-CCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 114 VKDNIATK-DKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSAD 192 (403)
Q Consensus 114 vKD~i~~~-gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~ 192 (403)
|||||+++ | ++||+||..+.++++.+||++|+|||++|||++||||||||+++..+.+.+|+|++||+|+||||+.|+
T Consensus 80 vKD~~~v~~G-~~tt~Gs~~~~~~~~~~DA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~~~~~~ 158 (497)
T PRK08137 80 LKDNIDAADP-MPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSEWANFRSTRSSSGWSARGGLTRNPYALDRS 158 (497)
T ss_pred eecceeecCC-CCcCcCcHhhcCCCCCcCcHHHHHHHHCCCEEEeecChHHhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 99999999 8 999999999999999999999999999999999999999999754433567899999999999999999
Q ss_pred CCCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHH
Q 041105 193 PCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAI 272 (403)
Q Consensus 193 ~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l 272 (403)
|||||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||+|+|+++++++|
T Consensus 159 ~GGSSgGsAaAVAaG~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~vl 238 (497)
T PRK08137 159 PCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVADAAAVLTAI 238 (497)
T ss_pred CCcCccHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCcccccCcccCeeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHH
Q 041105 273 VGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLE 352 (403)
Q Consensus 273 ~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~ 352 (403)
.|+|++|+.+...+ ....+|.+.+....++++||||+.+++ ..+++++++++++++.|+++||+|++ +++|.+.
T Consensus 239 ~g~d~~d~~~~~~~--~~~~~~~~~~~~~~~~~lrIgv~~~~~---~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~~ 312 (497)
T PRK08137 239 AGGDPADPATASAP--APAVDYVAALDADALRGARLGVARNYL---GYHPEVDAQFERALAELKAAGAVVID-VVDLDDG 312 (497)
T ss_pred hCCCCCCcccccCC--CCccchhhhccccccCCCEEEEEchhc---cCCHHHHHHHHHHHHHHHHCCCEEEe-ccCCchh
Confidence 99999886554321 011134333332346889999997643 37999999999999999999999987 7777665
Q ss_pred HHHHhhhcccchhccHHHHHHHHHHHHhhcC-CCCCCCHHHHHHhhhh
Q 041105 353 AILNSIANGETLAILAAEFKQALNAYLQELV-TSPVRSLADVIAFNKM 399 (403)
Q Consensus 353 ~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~-~~~~~sl~~~i~~~~~ 399 (403)
.+... +..++ .+|+..++..|+.... ....+++.+++.+++.
T Consensus 313 ~~~~~----~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (497)
T PRK08137 313 DWGEA----EKVVL-LHEFKAGLNAYLRSTAPHAPVRTLADLIAFNRA 355 (497)
T ss_pred hHHHH----HHHHH-HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhc
Confidence 54322 34455 7899888988876542 2335678787776653
No 3
>PRK06707 amidase; Provisional
Probab=100.00 E-value=1.4e-80 Score=651.15 Aligned_cols=346 Identities=39% Similarity=0.655 Sum_probs=303.1
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC---CCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCcee
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLN---PLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPIL 113 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~---~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~ 113 (403)
.+.++++.+|+++|++|++|++|++++||+||+++| +.+|+|++++++++++|+++|+++ +++. .+|||||||+
T Consensus 67 ~i~~~~i~~l~~~~~~g~lt~~el~~~~l~ri~~~~~~~~~lna~~~~~~~al~~A~~~d~~~--~~~~-~~pL~GiPi~ 143 (536)
T PRK06707 67 EVVNATVDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQER--SRNK-KSNLYGIPVV 143 (536)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCceEEEEECCHHHHHHHHHHHHHH--hcCC-CCCcCCCeEE
Confidence 356689999999999999999999999999999998 479999999999999999999987 5664 5899999999
Q ss_pred ecccccc-cCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCC-CC
Q 041105 114 VKDNIAT-KDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVL-SA 191 (403)
Q Consensus 114 vKD~i~~-~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~-~~ 191 (403)
|||||++ +| |+||+||.++.++++.+||++|+|||++||||+|||||+||+++.+....+|||++||+|+||||+ .+
T Consensus 144 vKD~i~~~~g-~~TtaGs~~l~~~~~~~DA~vV~rLr~AGAiilGKtnm~E~a~~~~~~~~~g~s~~~G~t~NP~~~~~~ 222 (536)
T PRK06707 144 VKDNVQTAKV-MPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNPYGPIKF 222 (536)
T ss_pred EecccccCCC-CccCcccHhhccCCCCCChHHHHHHHHCCCEEEEecCchhhhccCCCCCCCCCCCCCCCCCCCCCcccC
Confidence 9999999 75 999999999999999999999999999999999999999999766555678999999999999999 68
Q ss_pred CCCCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHH
Q 041105 192 DPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDA 271 (403)
Q Consensus 192 ~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~ 271 (403)
+|||||||||++||+|++++++|||||||||+||++|||||||||+|++|+.|++|+++++|++|||+|+|+|+++++++
T Consensus 223 ~pGGSSsGSAaAVAag~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~slDt~Gp~artV~D~a~~l~~ 302 (536)
T PRK06707 223 DTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNA 302 (536)
T ss_pred CCCCCCchHHHHHhCCCCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCcccccCeecCeeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHH-HHHHHHHHHHCCCEEEEccCCCC
Q 041105 272 IVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEA-FEHHVRTLRQQGAILLDNFEINN 350 (403)
Q Consensus 272 l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~-~~~a~~~L~~~G~~vv~~~~~p~ 350 (403)
|.|+|+.|+.+...+ ..+..+|...+....++++|||++.++. .++++.++ ++++++.|+++|++|++.+++|.
T Consensus 303 ~~g~d~~d~~~~~~~-~~~~~~~~~~l~~~~l~~~rigv~~~~~----~~~~~~~a~~~~a~~~L~~~Ga~iv~~~~l~~ 377 (536)
T PRK06707 303 MIGYDEKDVMTEKVK-DKERIDYTKDLSIDGLKGKKIGLLFSVD----QQDENRKAVAEKIRKDLQDAGAILTDYIQLNN 377 (536)
T ss_pred HcCCCCCcccccccc-ccCCcchhhhccccCCCCCEEEEECCcC----CCHHHHHHHHHHHHHHHHHcCCEEEeccCCch
Confidence 999999986654221 1122356555544568999999997642 57888888 59999999999999987467764
Q ss_pred HHHHHHhhhcccchhccHHHHHHHHHHHHhhcCCCCCCCHHHHHHhhhh
Q 041105 351 LEAILNSIANGETLAILAAEFKQALNAYLQELVTSPVRSLADVIAFNKM 399 (403)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~~~~~~sl~~~i~~~~~ 399 (403)
... . ...++ .+|++.+++.|+......+++++.|++.||+.
T Consensus 378 ~~~------~-~~~~~-~~e~~~~l~~y~~~~~~~~~~~~~~~~~~~~~ 418 (536)
T PRK06707 378 GGV------D-NLQTL-EYEFKHNVNDYFSQQKNVPVKSLEEIIAFNKK 418 (536)
T ss_pred hhH------H-HHHHH-HHHHHHHHHHHHhhhcCCCCCCHHHHHHhcCH
Confidence 221 1 23455 79999999999976555567899999999854
No 4
>PRK06828 amidase; Provisional
Probab=100.00 E-value=2.4e-80 Score=644.86 Aligned_cols=352 Identities=43% Similarity=0.668 Sum_probs=303.3
Q ss_pred ccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC---CCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCceeec
Q 041105 39 KEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLN---PLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPILVK 115 (403)
Q Consensus 39 ~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~---~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~vK 115 (403)
.++++.+|+++|++|++||+|++++|++||+++| +.+|+|++++++++++|+++|+++ +.|+.+||||||||+||
T Consensus 11 ~~~~~~~l~~~l~~g~~t~~el~~~~l~ri~~~~~~~~~lna~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPv~vK 88 (491)
T PRK06828 11 KELTIHDIQTAMEDGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHER--KIKGVRGPLHGIPVLLK 88 (491)
T ss_pred ccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCeeEEEEecCHHHHHHHHHHHHHH--hcCCCCCCccCceeeee
Confidence 4569999999999999999999999999999999 589999999999999999999887 77888899999999999
Q ss_pred ccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCC---CCC
Q 041105 116 DNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVL---SAD 192 (403)
Q Consensus 116 D~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~---~~~ 192 (403)
|||+++||++||+||..+.++++.+||++|++||++|||++||||||||+++.+.++.+|+|++||+|+||||+ .|+
T Consensus 89 D~~~v~gg~~tt~Gs~~~~~~~~~~da~vV~~Lr~aGaii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~d~~~~~r~ 168 (491)
T PRK06828 89 DNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKANMTELANFMSFEMWAGYSARGGQTINPYGTGEDDMF 168 (491)
T ss_pred eeEEecCCCcCCcCcHHHcCCCCCCChHHHHHHHHCCCEEEeecChHHHhhccCCCCCCCcCCCCCCcCCCCCCccCCcC
Confidence 99999944999999999999999999999999999999999999999999744333468899999999999999 689
Q ss_pred CCCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHH
Q 041105 193 PCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAI 272 (403)
Q Consensus 193 ~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l 272 (403)
|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|++|+++++|++|||||+|+|+++++++|
T Consensus 169 pGGSSgGsAaaVAag~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~s~d~~Gp~arsv~D~a~~~~~l 248 (491)
T PRK06828 169 VGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSL 248 (491)
T ss_pred CCcCchHHHHHHHcCCCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCccCCCeeccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCC
Q 041105 273 VGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLG--SNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINN 350 (403)
Q Consensus 273 ~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~--~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~ 350 (403)
.|+|+.|+.+.......+ .+|...+....++++||||+++.+ +. ..+++++++++++++.|+++|++|++.+++|.
T Consensus 249 ~g~d~~d~~~~~~~~~~~-~~~~~~~~~~~~~~lrigv~~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~p~ 326 (491)
T PRK06828 249 TGVDEKDVVTHKSEGIAE-HDYTKYLDANGLNGAKIGVYNNAPKEYY-ESGEYDEKLFKETIEVLRSEGATVVEDIDIPS 326 (491)
T ss_pred hCCCccCccccccCcCCC-CchhhhhccccCCCCEEEEEcCcccccc-CCCHHHHHHHHHHHHHHHhcCCEEEecccCcc
Confidence 999998865432110011 134433332357899999975421 22 37999999999999999999999987567776
Q ss_pred HHHHHHhhhcccchhccHHHHHHHHHHHHhhcCC-CCCCCHHHHHHhhhhCC
Q 041105 351 LEAILNSIANGETLAILAAEFKQALNAYLQELVT-SPVRSLADVIAFNKMFP 401 (403)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~~-~~~~sl~~~i~~~~~~~ 401 (403)
+...+ ...++ .+|+..++..|+..+.. .+++++.|++.||+.++
T Consensus 327 ~~~~~------~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (491)
T PRK06828 327 FHREW------SWGVL-LYELKHSLDNYLSKLPSTIPVHSISELMEFNENIA 371 (491)
T ss_pred chhHH------HHHHH-HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHhhhch
Confidence 54432 12344 68999999999876643 35789999999987654
No 5
>PRK06565 amidase; Validated
Probab=100.00 E-value=9.5e-80 Score=642.12 Aligned_cols=355 Identities=29% Similarity=0.421 Sum_probs=302.8
Q ss_pred cccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC-----CCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCC
Q 041105 36 FSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLN-----PLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGI 110 (403)
Q Consensus 36 ~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~-----~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~Gv 110 (403)
+++.++++.+|+++|++|++|++|++++||+||+++| +.+|+++.++++++++|+++|+++ ++|+.+||||||
T Consensus 2 ~~i~~~si~~L~~~l~~g~~t~~elv~a~l~ri~~~~~~~~~~~lna~~~~~~~Al~~A~~~D~~~--~~g~~~gpL~GI 79 (566)
T PRK06565 2 IEVTEVSIAELRAALESGRTTAVELVKAYLARIDAYDGPATGTALNAVVVRNPDALKEAEASDARR--ARGETLGPLDGI 79 (566)
T ss_pred CccccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCccccCcceEEEEecCHHHHHHHHHHHHHH--hcCCCCCCCCCC
Confidence 5678899999999999999999999999999999999 689999999988999999999988 788888999999
Q ss_pred ceeecccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCC
Q 041105 111 PILVKDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLS 190 (403)
Q Consensus 111 Pi~vKD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~ 190 (403)
||+|||||+++| |+||+||.++.++++.+||++|++||+||||++||||||||++ +..+ |.+||+|+||||+.
T Consensus 80 Pi~vKD~~~v~G-~~TT~Gs~~l~~~~~~~DA~vV~rLr~AGAIilGKTnm~E~a~-----g~~~-~~~~G~t~NP~n~~ 152 (566)
T PRK06565 80 PYTAKDSYLVKG-LTAASGSPAFKDLVAQRDAFTIERLRAAGAICLGKTNMPPMAN-----GGMQ-RGVYGRAESPYNAA 152 (566)
T ss_pred EEEEecccccCC-CCcccccHhhcCCCCCCCHHHHHHHHHCCCEEEEecccchhhh-----CCCC-CCCCCCcCCCcCcc
Confidence 999999999996 9999999999999999999999999999999999999999997 3333 66999999999999
Q ss_pred C----CCCCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHH
Q 041105 191 A----DPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTV 266 (403)
Q Consensus 191 ~----~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a 266 (403)
+ +|||||||||++||+|++++|+|||||||||+||++|||||||||+|++|+.|++|+++++|++|||+|+|+|++
T Consensus 153 ~~~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~s~D~vGp~aRsV~D~a 232 (566)
T PRK06565 153 YLTAPFASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLL 232 (566)
T ss_pred cCcCCCCCCCCccHHHHHhCCCCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCcccccCCCCeecceeCCHHHHH
Confidence 9 599999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCChhh---hh-----c-ccCCCCCCccccc-CCCCCCCcEEEEEcCCCCCC------------------
Q 041105 267 YVLDAIVGFDAKDEAT---RE-----A-SKYIPPGGYKQFL-KPHGLQGKRLGIVRNLGSNF------------------ 318 (403)
Q Consensus 267 ~~~~~l~g~d~~d~~~---~~-----~-~~~~p~~~~~~~~-~~~~~~~lrIGv~~~~~~~~------------------ 318 (403)
+++++|.|.|+.|... .. + ....+..+|...+ ...+++++|||+++..++..
T Consensus 233 ~~l~vl~g~D~~d~~~~~~~~~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (566)
T PRK06565 233 EVLDVIVADDPDTRGDLWRLQPWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQR 312 (566)
T ss_pred HHHHHhcCCCcccccchhhccccccCccccccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccccccccc
Confidence 9999999999877421 10 0 0111112454432 22468999999997654321
Q ss_pred -CCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhhh----cccchhccHHHHH---------HHHHHHHhhcCC
Q 041105 319 -TISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSIA----NGETLAILAAEFK---------QALNAYLQELVT 384 (403)
Q Consensus 319 -~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~~----~~~~~~~~~~e~~---------~~l~~yl~~~~~ 384 (403)
..++++.++|+++++.|+++|++|++ +++|.+........ ......+ .+||+ .+++.||+.+..
T Consensus 313 ~~~~~~v~~~~~~a~~~L~~~Ga~vv~-v~~p~~~~~e~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~yL~~~~~ 390 (566)
T PRK06565 313 IHTRPSVIDLWEAARRALEAAGAEVIE-VDFPLVSNCEGDRPGAPTVFNRGLV-SPEFLHDELWELSGWAFDDFLRANGD 390 (566)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEE-eecCCcccccccccccccccccccc-chhhhhccccchhHHHHHHHHHhcCC
Confidence 14689999999999999999999997 78886542211100 0112334 67885 459999999987
Q ss_pred CCCCCHHHHHHhhhhCCC
Q 041105 385 SPVRSLADVIAFNKMFPE 402 (403)
Q Consensus 385 ~~~~sl~~~i~~~~~~~e 402 (403)
++++||+||+. |+.+++
T Consensus 391 ~~~~sl~di~~-~~~~~~ 407 (566)
T PRK06565 391 PKLNRLADVDG-PQIFPH 407 (566)
T ss_pred CCCCCHHHhhh-hhcccC
Confidence 88999999998 766653
No 6
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-79 Score=636.20 Aligned_cols=300 Identities=39% Similarity=0.593 Sum_probs=274.1
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHH--HHHHHhHHHHHcCCCCCCCCCCCcee
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AIN--QADKADQERKAKAPRSQLGLHGIPIL 113 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~--~A~~~D~~~~~~~g~~~gpL~GvPi~ 113 (403)
.+..+++.+|.++++++++|++|+++++|+||+++|+.+|+++.++++ ++. +|+++|+++ .+|...|||+||||+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~s~~e~~~~~l~ri~~~~~~~na~~~~~~e~a~~~~~A~~~d~~~--~~g~~~gpL~GvPia 80 (475)
T COG0154 3 ALTELTAAELAALLRAKELSAVELVEAYLARIEALNPDLNAFVAVDPEAALALAEAAAADARL--AAGEPLGPLAGVPIA 80 (475)
T ss_pred chhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCEEEEeChhhcchHHHHHHHHHHH--hcCCCCCCcCCceEE
Confidence 456789999999999999999999999999999999999999999998 654 999999998 788888999999999
Q ss_pred ecccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 114 VKDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADP 193 (403)
Q Consensus 114 vKD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~ 193 (403)
|||||+|+| ++||+||..+.+++|.+||++|+|||++||||+||||||||+| +..+.|++||+|+||||++|+|
T Consensus 81 vKDn~~~~G-~~Tt~gS~~l~~~~p~~DA~vV~rL~~aGaviiGKTNm~Efa~-----g~~~~~s~~G~t~NP~~~~~~p 154 (475)
T COG0154 81 VKDNIDTAG-LPTTAGSKALEDYVPPYDATVVERLRAAGAVILGKTNMDEFAM-----GSSTENSAFGPTRNPWNLERVP 154 (475)
T ss_pred EeeccccCC-CccCccChhhccCCCCcCcHHHHHHHHCCCEEEeecCCchhhc-----CCCCCCCCCCCCCCCCCCCCCC
Confidence 999999996 9999999999999999999999999999999999999999999 6788899999999999999999
Q ss_pred CCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHh
Q 041105 194 CGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIV 273 (403)
Q Consensus 194 GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~ 273 (403)
||||||||++||+|++++|+|||||||||+||+||||||||||+||||++|++|+++++|++|||||||+|+++++++|.
T Consensus 155 GGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D~a~l~~v~~ 234 (475)
T COG0154 155 GGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRDAALLLDVIA 234 (475)
T ss_pred CcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCh-hhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHH
Q 041105 274 GFDAKDE-ATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLE 352 (403)
Q Consensus 274 g~d~~d~-~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~ 352 (403)
|+|+.|. ..... ..+ + ......++++|||++.+.....+.++++.++++++++.|+++|++|++ +++|.+.
T Consensus 235 g~D~~d~~~~~~~--~~~--~---~~~~~~~~~lrigv~~~~~~~~~~~~~v~~~~~~a~~~l~~~Ga~v~~-v~lp~~~ 306 (475)
T COG0154 235 GPDPRDSPLPPPP--PVP--P---ALAGKDLKGLRIGVPKELGGGGPLDPDVRAAFEAAVKALEAAGAEVVE-VSLPLLS 306 (475)
T ss_pred CCCCccccccccc--Ccc--c---hhhccCCCCcEEEEECcccccCCCcHHHHHHHHHHHHHHHHCCCEEEe-ccCCchh
Confidence 9999984 11110 011 1 122356888999999987664457889999999999999999999997 8988443
No 7
>PRK07487 amidase; Provisional
Probab=100.00 E-value=3.6e-78 Score=626.85 Aligned_cols=317 Identities=26% Similarity=0.353 Sum_probs=281.1
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+..+++.+|+++|++|++|++|++++|++||+++|+.+|+|+++++| ++++|+++|+++ ++|+.+||||||||+|||
T Consensus 5 ~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD 82 (469)
T PRK07487 5 LWRLSAAELAAAVRSRDVSAREAAEAALARLDAVNPAINAVVDHRPEEALAQADAVDAAR--ARGDDPGPLAGVPVTVKV 82 (469)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHH--hcCCCCCCcCCCEEEEec
Confidence 56779999999999999999999999999999999999999999998 999999999987 778888999999999999
Q ss_pred cccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGS 196 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGS 196 (403)
+|+++| ++||+||..+.++++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+||||
T Consensus 83 ~~~v~G-~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~d~~~~~GGS 156 (469)
T PRK07487 83 NVDQAG-FATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSY-----RWFTDNPLHGRTLNPWDPSLTPGGS 156 (469)
T ss_pred ccccCC-CccCcchHHhcCCCCCCchHHHHHHHHCCCEEEEecChhhhhc-----CCCCCCCCCCCCCCCCCCCCCCCcc
Confidence 999996 9999999999999999999999999999999999999999998 7788999999999999999999999
Q ss_pred ChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCC----CC-CCCcccCCCcCCHHHHHHHHHH
Q 041105 197 SSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIP----VS-PRLDTVGPISKTVADTVYVLDA 271 (403)
Q Consensus 197 SgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~----~s-~~~d~~Gpmarsv~D~a~~~~~ 271 (403)
|||||++||+|++++|+|||||||||+||+||||||||||+||+|+.|+++ ++ .++|++|||||||+|+++++++
T Consensus 157 SgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~ 236 (469)
T PRK07487 157 SGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAA 236 (469)
T ss_pred hHHHHHHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873 33 4789999999999999999999
Q ss_pred HhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEcc-CCCC
Q 041105 272 IVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNF-EINN 350 (403)
Q Consensus 272 l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~-~~p~ 350 (403)
|.|+|+.|+.+... + +. ...+++|||++.++++. ..+++++++++++++.|+++||+|++ + ++|.
T Consensus 237 l~g~d~~d~~~~~~----~---~~-----~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~ 302 (469)
T PRK07487 237 MAAPDPRDPWWVPA----P---LE-----GPPRPKRVALCVRPDGL-DVDPEVEAALRDAARRLEDAGWTVEE-VDDTPP 302 (469)
T ss_pred HhCCCCCCCccCCC----C---cc-----CCCCCcEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCEEEe-cCCCCc
Confidence 99999888543211 1 11 23578999999876543 58999999999999999999999987 6 7887
Q ss_pred HHHHHHhhhcccchhccHHHHHHHHHHHHhh
Q 041105 351 LEAILNSIANGETLAILAAEFKQALNAYLQE 381 (403)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~ 381 (403)
+++.... +..++ .+|....+..++..
T Consensus 303 ~~~~~~~----~~~~~-~~e~~~~~~~~~~~ 328 (469)
T PRK07487 303 LREAAEL----QERLW-LGDGYEALLAAAEA 328 (469)
T ss_pred hHHHHHH----HHHHH-HHHHHHHHHHHHHh
Confidence 7665432 23333 56666666665543
No 8
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.6e-78 Score=628.20 Aligned_cols=309 Identities=36% Similarity=0.540 Sum_probs=274.4
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCc
Q 041105 50 FKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTA 128 (403)
Q Consensus 50 l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~ 128 (403)
|++|++|++|++++|++||+++|+.+|||++++++ ++++|+++|+++ ++|+ +||||||||+|||||+++| ++||+
T Consensus 1 i~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~-~gpL~GvPv~vKD~~~v~G-~~tt~ 76 (459)
T PRK00012 1 LKNKEISAVELTQAYLDRIEEVDPKLNAFITVTEEEALAQAKAADAKL--AAGE-AGPLAGIPIAIKDNICTKG-IRTTC 76 (459)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhcccCCeEEEeCHHHHHHHHHHHHHHH--hcCC-CCccCCeEEEEecccccCC-CccCc
Confidence 47899999999999999999999999999999998 999999999988 6777 8999999999999999996 99999
Q ss_pred CchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcC
Q 041105 129 GSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANM 208 (403)
Q Consensus 129 Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~ 208 (403)
||..+.++++.+|+++|+|||++|||++||||||||++ +..++|++||+|+||||+.|+|||||||||++||+|+
T Consensus 77 Gs~~~~~~~~~~da~vV~~Lr~aGAiilGkTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~ 151 (459)
T PRK00012 77 ASKILENYVPPYDATVVEKLKAAGAVILGKTNMDEFAM-----GSSTENSAFGPTKNPWDLERVPGGSSGGSAAAVAAGL 151 (459)
T ss_pred cCHhhccCCCCcchHHHHHHHHCCCEEEeeccchhhhc-----CCCCCCCCCCCcCCCCCCCCCCCCCcHHHHHHHHcCC
Confidence 99999999999999999999999999999999999998 6788999999999999999999999999999999999
Q ss_pred cceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccC
Q 041105 209 VAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKY 288 (403)
Q Consensus 209 ~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~ 288 (403)
+++|+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|+|+.|+.+...
T Consensus 152 ~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~--- 228 (459)
T PRK00012 152 APAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVEDAALLLNAIAGHDPKDSTSADV--- 228 (459)
T ss_pred CceEEeeCCCCccchhHHHcCceeecCCCCcccCCCCcCcccCCCcccCccCCHHHHHHHHHHHhCCCCCCcccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888554321
Q ss_pred CCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhhhcccchhccH
Q 041105 289 IPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSIANGETLAILA 368 (403)
Q Consensus 289 ~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~~~~~~~~~~~ 368 (403)
+..+|...+. ..++++|||++++.++. ..+|+++++++++++.|+++||+|++ +++|.+.+.... +..++ .
T Consensus 229 -~~~~~~~~~~-~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~~~~~~~----~~~~~-~ 299 (459)
T PRK00012 229 -PVPDYTAALG-KDIKGLKIGVPKEYFGE-GLDPEVKEAVEAAIKKLEDLGAEIVE-VSLPHTKYALPA----YYIIA-P 299 (459)
T ss_pred -CCCchhhhhc-ccccccEEEEEcccccc-cCCHHHHHHHHHHHHHHHHCCCEEEE-eCCCchHHHHHH----HHHHH-H
Confidence 1113544333 34688999999876543 57999999999999999999999987 788876654322 23344 6
Q ss_pred HHHHHHHHHHH
Q 041105 369 AEFKQALNAYL 379 (403)
Q Consensus 369 ~e~~~~l~~yl 379 (403)
.|+...+..|.
T Consensus 300 ~~~~~~~~~~~ 310 (459)
T PRK00012 300 AEASSNLARYD 310 (459)
T ss_pred HHHHHHHhhcc
Confidence 67766666653
No 9
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=3.2e-78 Score=626.12 Aligned_cols=307 Identities=35% Similarity=0.535 Sum_probs=272.3
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCC
Q 041105 46 LQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKM 124 (403)
Q Consensus 46 l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~ 124 (403)
|+++|++|++||+||+++|++||+++|+.+|||+++++| ++++|+++|+++ + ||||||||+|||||+++| +
T Consensus 1 l~~~~~~g~~s~~ev~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~--~-----gpL~GvPv~vKD~~~v~G-~ 72 (460)
T TIGR00132 1 LRQLLKKKEISIKEVLEASLDRIEANKDKINAFLEVTVEKALKQAKKLDKAI--L-----TPLAGIPIAVKDNISTKG-I 72 (460)
T ss_pred ChhHHhcCCCCHHHHHHHHHHHHHHhcccCCeEEEcCHHHHHHHHHHHHHhc--c-----CCcCCcEEEEecccccCC-c
Confidence 568999999999999999999999999999999999998 999999999876 2 899999999999999996 9
Q ss_pred cCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHH
Q 041105 125 NTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISV 204 (403)
Q Consensus 125 ~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaV 204 (403)
+||+||..+.++++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+|||||||||++|
T Consensus 73 ~tt~Gs~~~~~~~~~~dA~vV~~L~~aGAii~GKTn~~E~a~-----~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaV 147 (460)
T TIGR00132 73 VTTCASKILENYIPPYDATVIERLKQAGALIIGKTNMDEFAM-----GSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAV 147 (460)
T ss_pred ccCcCChhhccCCCCCchHHHHHHHHCCCEEEEEechhHHhc-----CCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHH
Confidence 999999999999999999999999999999999999999998 678899999999999999999999999999999
Q ss_pred HhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhh
Q 041105 205 AANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATRE 284 (403)
Q Consensus 205 Aag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~ 284 (403)
|+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||+|+|+++++++|.|+|+.|+.+..
T Consensus 148 AaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~~~~d~~~~~ 227 (460)
T TIGR00132 148 AADLAPFSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAK 227 (460)
T ss_pred HcCCCCeEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCcccCCCcccCeeCCHHHHHHHHHHHcCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988865432
Q ss_pred cccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhhhcccch
Q 041105 285 ASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSIANGETL 364 (403)
Q Consensus 285 ~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~~~~~~~ 364 (403)
. |..+|...+. ..++++|||++.+.+. ..++++.++++++++.|+++||+|++ +++|.++..... +..
T Consensus 228 ~----~~~~~~~~~~-~~~~~lrig~~~~~~~--~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~p~~~~~~~~----~~~ 295 (460)
T TIGR00132 228 V----PDPEFFEELK-KDLKGLKVGVVKEFSE--EMDKEVQEKFENALEVLEELGAEIVE-VSFPHVKYALPI----YYI 295 (460)
T ss_pred C----Cccchhhhhh-cccCCCEEEEECcccc--cCCHHHHHHHHHHHHHHHHCCCEEEE-eCCCcHHHHHHH----HHH
Confidence 1 2223433332 2467899999987553 37999999999999999999999987 788876654432 233
Q ss_pred hccHHHHHHHHHHH
Q 041105 365 AILAAEFKQALNAY 378 (403)
Q Consensus 365 ~~~~~e~~~~l~~y 378 (403)
++ ..|+..++..|
T Consensus 296 ~~-~~e~~~~~~~~ 308 (460)
T TIGR00132 296 IS-PSEASSNLARY 308 (460)
T ss_pred HH-HHHHHHHHhcc
Confidence 33 56666655555
No 10
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=6.9e-78 Score=624.40 Aligned_cols=296 Identities=27% Similarity=0.390 Sum_probs=269.7
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+.++++.+|+++|++|++|++||+++|++||+++|+.+|+|+++++| ++++|+++|+++ ++|+.+||||||||+|||
T Consensus 4 ~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD 81 (466)
T PRK06169 4 LADLTAVELLAAYRRGELSPVEATQAVLDRIDRRDPAVNAFCLVDAEGALAAARASEERW--RRGEPCGLLDGVPVSIKD 81 (466)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCEEEEeCHHHHHHHHHHHHHHH--hcCCCCCCcCCceEEEec
Confidence 56779999999999999999999999999999999999999999998 999999999988 778888999999999999
Q ss_pred cccccCCCcCCcCchhhcCCCC-CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVV-PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCG 195 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~-~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GG 195 (403)
||+++| ++||+||..+.++.+ .+||++|++||++|||++||||||||++ +..+.|++||+|+||||++|+|||
T Consensus 82 ~~~v~G-~~tt~Gs~~~~~~~p~~~da~vV~~Lr~aGAii~GKTn~~E~a~-----~~~~~n~~~G~t~NP~~~~~~~GG 155 (466)
T PRK06169 82 IFLTRG-WPTLRGSRAIDADGPWDVDAPAVARLREAGAVLLGKTTTPEFGW-----KGVTDSPLYGITRNPWDTRLTAGG 155 (466)
T ss_pred ccccCC-cccCccChhhccCCCCCCCHHHHHHHHHCCCEEEEecCchHhhc-----CCCCCCCCCCCCCCCCCCCCCCCc
Confidence 999996 999999999997776 7999999999999999999999999998 677889999999999999999999
Q ss_pred CChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCC
Q 041105 196 SSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGF 275 (403)
Q Consensus 196 SSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~ 275 (403)
||||||++||+|++++|+|||||||||+||+||||||||||+||+|+.|+.+++ ++|++|||||+|+|+++++++|.|+
T Consensus 156 SSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-~~d~~Gp~arsv~D~~~~~~~l~g~ 234 (466)
T PRK06169 156 SSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-TLAHVGPMTRTVADAALLLDVIARP 234 (466)
T ss_pred CcHHHHHHHHcCCCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-cccccCCeeCCHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999886 8999999999999999999999999
Q ss_pred CCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 276 DAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 276 d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
|+.|+.+... +..+|.+.+. ...+++||||+.++++. ..+|++.++++++++.|+++|++|++ ++++
T Consensus 235 ~~~d~~~~~~----~~~~~~~~~~-~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~ 301 (466)
T PRK06169 235 DARDWSALPP----PTTSFLDALD-RDVRGLRIAYSPTLGYV-DVDPEVAALVAQAVQRLAALGARVEE-VDPG 301 (466)
T ss_pred CCCCCcccCC----CCcchhhhhc-cCCCCCEEEEECCcCCC-CCCHHHHHHHHHHHHHHHHcCCEEEE-eCCC
Confidence 9888654322 1123443332 35688999999876544 58999999999999999999999987 6755
No 11
>PRK07486 amidase; Provisional
Probab=100.00 E-value=1.2e-77 Score=625.39 Aligned_cols=300 Identities=28% Similarity=0.417 Sum_probs=270.2
Q ss_pred cccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCH-H-HHHHHHHHhHHHHHcCCCCCCCCCCCcee
Q 041105 36 FSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNP-D-AINQADKADQERKAKAPRSQLGLHGIPIL 113 (403)
Q Consensus 36 ~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~-~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~ 113 (403)
.++..+++.+|+++|++|++|++|++++||+||+++|+.+|+|+++++ + ++++|+++|+++ ++|+.+||||||||+
T Consensus 7 ~~~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~ 84 (484)
T PRK07486 7 DPIVRLSAHALSRAIRRRQVSCVEVMRAYLAHIERVNPAVNAIVALRDRDALLAEAAEKDAAL--ARGEYRGWLHGMPQA 84 (484)
T ss_pred hhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCceEEEeCccHHHHHHHHHHHHHH--hcCCCCCCcCCCeEE
Confidence 356778999999999999999999999999999999999999999976 5 699999999988 778889999999999
Q ss_pred ecccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 114 VKDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADP 193 (403)
Q Consensus 114 vKD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~ 193 (403)
|||||+++| ++||+||..+.++++.+||++|+|||++|||++||||||||++ +..++|++||+|+||||++|+|
T Consensus 85 vKD~~~v~G-~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGaii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~p 158 (484)
T PRK07486 85 PKDLAPTKG-IRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEFGL-----GSHTYNPVYGATRNPYDPSRSA 158 (484)
T ss_pred EecccccCC-cCcccccHhhCCCCCCCcHHHHHHHHHCCCeeEEecCchHHhc-----CCCCCCCCCCCCCCCCCCCCCC
Confidence 999999996 9999999999999999999999999999999999999999998 6778999999999999999999
Q ss_pred CCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCC-CCCCCCcccCCCcCCHHHHHHHHHHH
Q 041105 194 CGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVI-PVSPRLDTVGPISKTVADTVYVLDAI 272 (403)
Q Consensus 194 GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~-~~s~~~d~~Gpmarsv~D~a~~~~~l 272 (403)
||||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|.+ ++++++|++|||||||+|+++++++|
T Consensus 159 GGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~s~d~~Gp~arsv~D~a~~~~~l 238 (484)
T PRK07486 159 GGSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQQLGTEGPMGRTVEDVALLLAVQ 238 (484)
T ss_pred CcCcHHHHHHHHcCCCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCcccccccccccCCeeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999865 78899999999999999999999999
Q ss_pred hCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 273 VGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 273 ~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
.|+|+.|+.+... +..+|...+. ...+++||||+.+++.....++++.++++++++.|+++|++|++ ++++
T Consensus 239 ~g~d~~d~~~~~~----~~~~~~~~~~-~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~ 309 (484)
T PRK07486 239 AGYDPRDPLSLAE----DPARFAQPLE-ADLRGKRIAWLGDWGGYLPMEAGVLELCEAALATLRELGCDVEA-ALPA 309 (484)
T ss_pred hCCCCCCCccccC----CCcchhhHhc-cCCCCCEEEEeCcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEE-eCCC
Confidence 9999988654321 1112433222 34688999999765432247999999999999999999999976 5555
No 12
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=1.6e-77 Score=622.56 Aligned_cols=312 Identities=36% Similarity=0.485 Sum_probs=281.7
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeec
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVK 115 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vK 115 (403)
++.++++.+|+++|++|++|++||+++|++||++++ .+|||+++++| ++++|+++|+++ ++|+.++ ||||||+||
T Consensus 7 ~~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~-~lna~~~~~~~~al~~A~~~d~~~--~~g~~~g-L~GvPi~vK 82 (472)
T PRK07488 7 DVASLSLTEAAAALRSGRLSCLELVEALLARAAALA-PLNAFTTVDAEGALAAARRIDAQR--AAGAALL-LAGVPIVIK 82 (472)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-cCCEEEEcCHHHHHHHHHHHHHHH--hcCCCCC-cCceEEEEE
Confidence 467889999999999999999999999999999986 69999999998 999999999988 6787777 999999999
Q ss_pred ccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 116 DNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCG 195 (403)
Q Consensus 116 D~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GG 195 (403)
|||+++| ++||+||..+.++++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.++|||
T Consensus 83 D~~~v~G-~~tt~Gs~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~GG 156 (472)
T PRK07488 83 DNINTAG-MPTTAGTPALLGFVPATDAPVVQRLLDAGAVPLGKANMHELAF-----GITSNNGAFGAVRNPYDPARIAGG 156 (472)
T ss_pred cccccCC-CccCcCChhhccCCCCCCHHHHHHHHHCCCeeeeccChhHHhc-----CCCCCCCCCCCCCCCCCCCCCCCC
Confidence 9999996 9999999999999999999999999999999999999999998 677889999999999999999999
Q ss_pred CChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCC
Q 041105 196 SSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGF 275 (403)
Q Consensus 196 SSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~ 275 (403)
||||||++||+|++++|+|||||||||+||+||||||||||+||+|++|++|+++++|++|||||||+|+++++++|.|+
T Consensus 157 SSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~~~~d~~Gp~arsv~D~a~~~~vl~g~ 236 (472)
T PRK07488 157 SSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVADLALLDAVITGD 236 (472)
T ss_pred CchHHHHHHHcCCCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCcccccccCCcccCccCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHH
Q 041105 276 DAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAIL 355 (403)
Q Consensus 276 d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~ 355 (403)
|+.++ + ..++++|||+++++++. ..+++++++++++++.|+++|++|++ +++|.+.++.
T Consensus 237 d~~~~---------~----------~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~~~~~ 295 (472)
T PRK07488 237 AALPA---------P----------VALAGLRLGVPAAPFWD-GLDPDVAAVAEAALAKLAAAGVTFVE-LDLPGLHELN 295 (472)
T ss_pred CCCCC---------C----------cCcCCCEEEEEcchhcc-CCCHHHHHHHHHHHHHHHHCCCEEEe-eCCcCHHHHh
Confidence 76431 1 13578999999876554 47999999999999999999999987 7888766543
Q ss_pred HhhhcccchhccHHHHHHHHHHHHhhcC
Q 041105 356 NSIANGETLAILAAEFKQALNAYLQELV 383 (403)
Q Consensus 356 ~~~~~~~~~~~~~~e~~~~l~~yl~~~~ 383 (403)
.. .+..+. .+|+..++..|+....
T Consensus 296 ~~---~~~~~~-~~e~~~~~~~~~~~~~ 319 (472)
T PRK07488 296 EA---VGFPIA-LYEALADLRAYLRENG 319 (472)
T ss_pred hh---HHHHHH-HHHHHHHHHHHHHhcC
Confidence 21 122344 6788888888876543
No 13
>PRK06170 amidase; Provisional
Probab=100.00 E-value=2.1e-77 Score=624.44 Aligned_cols=302 Identities=27% Similarity=0.368 Sum_probs=269.1
Q ss_pred cccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceee
Q 041105 36 FSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILV 114 (403)
Q Consensus 36 ~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~v 114 (403)
.++..+|+.+|+++|++|++|++|++++||+||+++|+.+|+|+++++| ++++|+++|+++ ++| ..||||||||+|
T Consensus 7 ~~~~~~s~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~--~~g-~~gpL~GvPv~V 83 (490)
T PRK06170 7 DEWSFLPATELAAALAAGEVSSVELTDLAIARIERHDGKINAIVVRDFDRARAAARAADAAR--ARG-ERGPLLGIPVTV 83 (490)
T ss_pred chhhhcCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCcCEEEECCHHHHHHHHHHHHHHH--hcC-CCCCcCCceEEE
Confidence 4678889999999999999999999999999999999999999999998 999999999987 666 479999999999
Q ss_pred cccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 115 KDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPC 194 (403)
Q Consensus 115 KD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~G 194 (403)
||+|+++| ++||+||..+.++++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+||
T Consensus 84 KD~~~v~G-~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~G 157 (490)
T PRK06170 84 KESFNVAG-LPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQ-----DWQSYNEIYGTTNNPWDLARTPG 157 (490)
T ss_pred ecccccCC-cccCCCChhhcCCCCCccHHHHHHHHHCCCEEEEecCChhhcc-----CCCccCCCCCCCCCCCCCCCCCC
Confidence 99999996 9999999999999999999999999999999999999999998 66789999999999999999999
Q ss_pred CCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCC-----C--CCCCcccCCCcCCHHHHHH
Q 041105 195 GSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIP-----V--SPRLDTVGPISKTVADTVY 267 (403)
Q Consensus 195 GSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~-----~--s~~~d~~Gpmarsv~D~a~ 267 (403)
|||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|++| + +.++|++|||||||+|+++
T Consensus 158 GSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp~arsv~D~a~ 237 (490)
T PRK06170 158 GSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQADLAVAGPMARSARDLAL 237 (490)
T ss_pred CChHHHHHHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccccccccccCccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 4 3368999999999999999
Q ss_pred HHHHHhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccC
Q 041105 268 VLDAIVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFE 347 (403)
Q Consensus 268 ~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~ 347 (403)
++++|.|+|+.|+..... ...|. . ....++++|||++.+++.. ..+++++++++++++.|+++|++|++ ++
T Consensus 238 ~l~~l~g~d~~d~~~~~~-~~~~~-----~-~~~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~ 308 (490)
T PRK06170 238 LLDVMAGPDPLDGGVAYR-LALPP-----A-RHGRLKDFRVLVLDEHPLL-PTDAAVRAAIERLAAALADAGARVVR-HS 308 (490)
T ss_pred HHHHHhCCCccccccccc-cCCCc-----c-cccccCCCEEEEECCcCCC-CCCHHHHHHHHHHHHHHHHCCCEEEE-cC
Confidence 999999999887321100 00110 0 1124678999999876543 58999999999999999999999987 54
Q ss_pred --CCCHHHHH
Q 041105 348 --INNLEAIL 355 (403)
Q Consensus 348 --~p~~~~~~ 355 (403)
+|.+++..
T Consensus 309 ~~~~~~~~~~ 318 (490)
T PRK06170 309 PLLPDLAESA 318 (490)
T ss_pred CCCCchHHHH
Confidence 55555544
No 14
>PRK07042 amidase; Provisional
Probab=100.00 E-value=3e-77 Score=619.32 Aligned_cols=296 Identities=26% Similarity=0.422 Sum_probs=266.5
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+..+++.+|+++|++|++|++|++++|++||+++|+.+|||+++++| ++++|+++|+++ ++|+.+||||||||+|||
T Consensus 4 ~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~d~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD 81 (464)
T PRK07042 4 LHDLSAVELLAGYRARSLSPVEVTEAVLAHIARWEPHLNALYAFDPEAARAAARASTARW--AKGEPLGPLDGVPVTIKE 81 (464)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEcCHHHHHHHHHHHHHHH--HcCCCCCCcCCCEEEEEc
Confidence 56779999999999999999999999999999999999999999998 999999999988 778889999999999999
Q ss_pred cccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGS 196 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGS 196 (403)
||+++| ++||+||..+.++++.+||++|+|||++|||++||||||||++ +..|+|++||+|+||||++|+||||
T Consensus 82 ~~~v~G-~~tt~Gs~~~~~~~~~~dA~vV~~Lr~aGAiilGKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~~GGS 155 (464)
T PRK07042 82 NIATRG-VPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDYGM-----LSSGLSSFHGLTRNPWDLDQNPGGS 155 (464)
T ss_pred ccccCC-cccCCCChhhcCCCCCcchHHHHHHHHCCCEEEEecCchHhhc-----CCCCCCCCCCCcCCCCCCCCCCCCC
Confidence 999996 9999999999999999999999999999999999999999998 6788999999999999999999999
Q ss_pred ChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCC
Q 041105 197 SSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFD 276 (403)
Q Consensus 197 SgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d 276 (403)
|||||++||+|++++|+|||||||||+||+||||||||||+||||+.|.. +.|++|||||+|+|+++++++|.|+|
T Consensus 156 SgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~----~~d~~Gp~arsv~D~a~~l~vl~g~d 231 (464)
T PRK07042 156 SAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY----TGRCAGPMTRTVDDAALLMSVLSRPD 231 (464)
T ss_pred hHHHHHHHHcCCCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc----cccccCCccCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999853 35899999999999999999999999
Q ss_pred CCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHH
Q 041105 277 AKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLE 352 (403)
Q Consensus 277 ~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~ 352 (403)
+.|+.+..+ +..+|.. +. ..++++||||+.++++....+|++.++++++++.|+++|++|++ ++++...
T Consensus 232 ~~d~~~~~~----~~~~~~~-~~-~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~~ 300 (464)
T PRK07042 232 ARDGTSLPP----QDIDWSD-LD-IDVRGLRIGLMLDAGCGLAVDPEVRAAVEAAARRFEAAGAIVEP-VPPFLTR 300 (464)
T ss_pred CCCccccCC----CCcChhh-hc-cCcCCCEEEEECcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEE-eCCchhH
Confidence 888654322 1112321 22 34678999999775442248999999999999999999999987 6755433
No 15
>PRK09201 amidase; Provisional
Probab=100.00 E-value=2.6e-77 Score=619.81 Aligned_cols=297 Identities=29% Similarity=0.432 Sum_probs=265.9
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+.++++.+|+++|++|++|++||+++||+||+++|+.+|||+++++| ++++|+++|+++ ++|+.+||||||||+|||
T Consensus 4 ~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~d~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD 81 (465)
T PRK09201 4 LSSLSAAEIAAAVRAGELSARAVAQATLARIARANPQLNAFTAVTAERALAEAARIDAAR--AAGEPLGPLAGVPFAVKN 81 (465)
T ss_pred cccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEcCHHHHHHHHHHHHHHH--HcCCCCCCcCCceEEEEe
Confidence 56779999999999999999999999999999999999999999998 999999999988 788889999999999999
Q ss_pred cccccCCCcCCcCchhhcCCCC-CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVV-PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCG 195 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~-~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GG 195 (403)
||+++| ++||+||..+.++++ .+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+|||
T Consensus 82 ~~~v~G-~~tt~Gs~~~~~~~~~~~dA~vV~~Lr~aGAii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~pGG 155 (465)
T PRK09201 82 LFDVAG-LTTLAGSKINRDRPPATRDATAVRRLEAAGAVLVGALNMDEYAY-----GFTTENSHYGATRNPHDLTRIAGG 155 (465)
T ss_pred ccccCC-cccCcCChhhccCCCCCCChHHHHHHHHCCCEEEEecChHHHhc-----CCCCCCCCCCCCCCCCCCCCCCCc
Confidence 999996 999999999999988 6999999999999999999999999998 678899999999999999999999
Q ss_pred CChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCC
Q 041105 196 SSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGF 275 (403)
Q Consensus 196 SSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~ 275 (403)
||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||+|+|+++++++|.|+
T Consensus 156 SSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~ 235 (465)
T PRK09201 156 SSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYDVLQGP 235 (465)
T ss_pred chHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCcccccCcccCccCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHH
Q 041105 276 DAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEA 353 (403)
Q Consensus 276 d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~ 353 (403)
|+.|+.+... |...|..... ..++++||||+.+.+.. ..+|+++++++++++.|+.. ++ +++|....
T Consensus 236 d~~d~~~~~~----~~~~~~~~~~-~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~--~~---v~~~~~~~ 302 (465)
T PRK09201 236 DPQDPFQADR----PAEPTAPLLD-RGAEGLRIAVLGGYFAQ-WADPEARAAVDRVAKALGAT--RE---VELPEAAR 302 (465)
T ss_pred CCCCcccccC----CCcchhhhhc-cCCCCCEEEEECccccC-CCCHHHHHHHHHHHHHccCc--ee---ecCCchhH
Confidence 9888654321 2112222122 34678999999776533 48999999999999999543 22 45565443
No 16
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-77 Score=614.79 Aligned_cols=290 Identities=33% Similarity=0.455 Sum_probs=266.5
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+..+++.+|+++|++|++|++|++++|++||+++|+ +|+|++++++ ++++|+++|+++ ++|+.+||||||||+|||
T Consensus 3 ~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~~-~na~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD 79 (452)
T PRK06102 3 TGAKSAAQLAVLIQSGALDPVQVAEQALDAIASYAD-QAVFISLTEERAMREAEASSARW--RAGRSLGLLDGIPIAWKD 79 (452)
T ss_pred ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCC-CCEEEEeCHHHHHHHHHHHHHHH--HCCCCCCCcCCCeEEEEe
Confidence 456789999999999999999999999999999986 8999999998 999999999988 788889999999999999
Q ss_pred cccccCCCcCCcCchhhcCCCC-CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCC--CCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVV-PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVL--SADP 193 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~-~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~--~~~~ 193 (403)
||+++| ++||+||..+.++++ .+||++|+|||++|||++||||||||++ +..|.|++||+|+||||+ .|+|
T Consensus 80 ~~~v~G-~~tt~Gs~~~~~~~~~~~dA~vV~rL~~aGAii~GKTn~~E~a~-----~~~~~n~~~G~t~NP~~~~~~~~~ 153 (452)
T PRK06102 80 LFDVAG-SVTTAGSVVLANAAPASRDAAVVALLARAGMVSIGRTNMSEFAF-----SGLGLNPHYGTPVNPRSTDVPRIP 153 (452)
T ss_pred ccccCC-CccCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeechHhHhc-----CCCCCCCCCCCCCCCCCCCCCcCC
Confidence 999996 999999999999887 7999999999999999999999999998 678899999999999996 7999
Q ss_pred CCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHh
Q 041105 194 CGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIV 273 (403)
Q Consensus 194 GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~ 273 (403)
||||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||+|+|++.++++|.
T Consensus 154 GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~a~~~~~l~ 233 (452)
T PRK06102 154 GGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVRDAVWIDAAMR 233 (452)
T ss_pred CCCcHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCcccccccCcccCccCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHH
Q 041105 274 GFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEA 353 (403)
Q Consensus 274 g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~ 353 (403)
|.|+.|.. + ..++++|||+..+.++. ..+|++.++++++++.|+++||+|++ +++|.+.+
T Consensus 234 g~~~~~~~--------~----------~~~~~~ri~~~~~~~~~-~~~~~v~~~~~~a~~~L~~~G~~v~~-~~~~~~~~ 293 (452)
T PRK06102 234 GLTAPDVV--------R----------RPLAGLRLVVPETVVFD-DAEPGVRAAFEAAVERLQAAGALVER-QAFPAFQE 293 (452)
T ss_pred CCCCcccc--------c----------cCCCCCEEEEecchhcc-cCCHHHHHHHHHHHHHHHhCCCEEEe-cCCccHHH
Confidence 98654310 1 13567899998775443 58999999999999999999999987 78888766
Q ss_pred HHH
Q 041105 354 ILN 356 (403)
Q Consensus 354 ~~~ 356 (403)
...
T Consensus 294 ~~~ 296 (452)
T PRK06102 294 ILD 296 (452)
T ss_pred HHH
Confidence 543
No 17
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=4.4e-77 Score=616.23 Aligned_cols=283 Identities=30% Similarity=0.426 Sum_probs=257.5
Q ss_pred cHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccc
Q 041105 42 TIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIAT 120 (403)
Q Consensus 42 si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~ 120 (403)
|+.+|+++|++|++|++|++++||+||+++|+.+|||+++++| ++++|+++|+++ ++|+.+||||||||+|||||++
T Consensus 1 ~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPv~vKD~~~v 78 (452)
T TIGR02715 1 SIVEIAGAIRSGRVSARAVAEATLARINQADGGLNAFTAVTAERALADAARIDADL--AAGSPLGPLAGVPFAVKNLFDV 78 (452)
T ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHHHHHH--HCCCCCCCcCCCeEEEEecccc
Confidence 5789999999999999999999999999999999999999998 999999999988 7788899999999999999999
Q ss_pred cCCCcCCcCchhhcCCCC-CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChh
Q 041105 121 KDKMNTTAGSFALLGSVV-PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSG 199 (403)
Q Consensus 121 ~gg~~Tt~Gs~~l~~~~~-~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgG 199 (403)
+| ++||+||..+.+++| .+||++|+|||+||||++||||||||++ +..+.|++||+|+||||++|+|||||||
T Consensus 79 ~G-~~tt~Gs~~~~~~~p~~~dA~vV~rL~~AGAii~GkTn~~Ef~~-----~~~~~n~~~G~t~NP~~~~~~~GGSSgG 152 (452)
T TIGR02715 79 AG-LTTLAGAKINRDLAPAKRDATLVQRLSAAGAVLVGALNMDEFAY-----GFTTENAHYGPTRNPHDLTRIAGGSSGG 152 (452)
T ss_pred CC-ceeCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccCHhhhc-----CCCCCCCCCCCCCCCCCCCCCCCcchHH
Confidence 96 999999999999987 7999999999999999999999999998 6788999999999999999999999999
Q ss_pred hHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCC
Q 041105 200 SAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKD 279 (403)
Q Consensus 200 saaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d 279 (403)
||++||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||+|+|+++++++|.|+|+.|
T Consensus 153 sAaaVAag~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~~~~d 232 (452)
T TIGR02715 153 SAAAVAAGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFVASLDHVGPFARSVEDLALAYDVMQGPDPQD 232 (452)
T ss_pred HHHHHHCCCCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCccccCcccCeeCCHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHC
Q 041105 280 EATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQ 338 (403)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~ 338 (403)
+.+... |..+|...+. ..++++|||++++.++. ..+|++.++++++++.|+.+
T Consensus 233 ~~~~~~----p~~~~~~~~~-~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~ 285 (452)
T TIGR02715 233 PFCTDR----PAEPTVPLLP-AGISGLRIAVLGGWFQQ-NADPEALAAVGRVAKALGAT 285 (452)
T ss_pred cccccC----CCcchhhhhh-cCCCCCEEEEECccccC-CCCHHHHHHHHHHHHhcCCe
Confidence 654321 2112211111 34678999999775533 47999999999999999543
No 18
>PRK07056 amidase; Provisional
Probab=100.00 E-value=1.1e-76 Score=613.61 Aligned_cols=288 Identities=33% Similarity=0.454 Sum_probs=266.8
Q ss_pred ccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCC-CccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccc
Q 041105 41 ATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNP-LLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNI 118 (403)
Q Consensus 41 ~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~-~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i 118 (403)
.++.+|++++++|++|++|++++|++||+++|+ .+|+|+++++| ++++|+++|+++ ++|+.+||||||||+|||+|
T Consensus 6 ~~~~~l~~~~~~g~~s~~ev~~~~l~ri~~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD~~ 83 (454)
T PRK07056 6 PTLAALAADLAAGRTTSRALVEAALARIADPAGEGARVFTHVDADAARAAADAADALR--AAGAAPSPLAGIPVSVKDLF 83 (454)
T ss_pred cCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCCccEEEEeCHHHHHHHHHHHHHHH--hCCCCCCCcCCCeEEEEeee
Confidence 389999999999999999999999999999997 59999999998 999999999987 78888999999999999999
Q ss_pred cccCCCcCCcCchhhcCCCC-CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCC----CCCCCC
Q 041105 119 ATKDKMNTTAGSFALLGSVV-PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPY----VLSADP 193 (403)
Q Consensus 119 ~~~gg~~Tt~Gs~~l~~~~~-~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~----~~~~~~ 193 (403)
+++| ++||+||..+.++++ .+||++|+|||++|||++||||||||++ +.++.|++||.|+||| |+.|+|
T Consensus 84 ~v~G-~~tt~Gs~~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~~~~~ 157 (454)
T PRK07056 84 DVAG-QVTRAGSRVLADAPPAAADAPAVARLRRAGAVLIGRTNMTEFAF-----SGLGLNPHYGTPRNPWRRDVGDGRIP 157 (454)
T ss_pred ccCC-CccCCCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccchhHhh-----CCCCCCCCCCCCCCCCCCCCCCCcCC
Confidence 9996 999999999999988 6999999999999999999999999998 6788999999999999 899999
Q ss_pred CCCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHh
Q 041105 194 CGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIV 273 (403)
Q Consensus 194 GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~ 273 (403)
||||||||++||+|++++|+|||||||||+||+||||||||||+||+|+.|++|+++++|++|||||+|+|+++++++|.
T Consensus 158 GGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~vl~ 237 (454)
T PRK07056 158 GGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACCALVDAVLA 237 (454)
T ss_pred CCcchHHHHHHHcCCCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCccccCcccCccCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHH
Q 041105 274 GFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEA 353 (403)
Q Consensus 274 g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~ 353 (403)
|+|+.|+. + ...+++|||++.+.++. ..+|+++++++++++.|+++|++|++ +++|.+..
T Consensus 238 g~d~~d~~--------~----------~~~~~lrig~~~~~~~~-~~~~~v~~~~~~a~~~L~~~G~~v~~-~~~~~~~~ 297 (454)
T PRK07056 238 GEEPVVPA--------A----------RPLEGLRLAVPTTVVLD-GLDATVAAAFERALKRLSAAGAIIEE-IAFPELAE 297 (454)
T ss_pred CCCCCCcc--------c----------ccccCcEEEEcchhhcc-CCCHHHHHHHHHHHHHHHHCCCEEEE-ecCcchHH
Confidence 98877631 1 13467999999875433 48999999999999999999999987 78887665
Q ss_pred HHH
Q 041105 354 ILN 356 (403)
Q Consensus 354 ~~~ 356 (403)
...
T Consensus 298 ~~~ 300 (454)
T PRK07056 298 LAE 300 (454)
T ss_pred HHH
Confidence 443
No 19
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=2.4e-77 Score=607.54 Aligned_cols=285 Identities=41% Similarity=0.628 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhcCCC
Q 041105 59 QLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALLGSV 137 (403)
Q Consensus 59 evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~~~~ 137 (403)
||+++||+||+++|+.+||+++++++ |+++|+++|+++ ++|+.++|||||||+|||||+++| ++||+||..+.+++
T Consensus 1 e~~~~~~~ri~~~~~~~na~~~~~~~~a~~~A~~~d~~~--~~~~~~~pL~Gip~~vKD~~~~~g-~~tt~G~~~~~~~~ 77 (441)
T PF01425_consen 1 ELVEAYLARIEAYNPELNAFVEVDFDEALAQARELDARR--ARGKPRGPLHGIPISVKDNIDVAG-LPTTAGSPALADNP 77 (441)
T ss_dssp HHHHHHHHHHHHHHHHH--EEEEEHHHHHHHHHHHHHHH--HTTSSSSTTTT-EEEEETTBSBTT-SBB-TTSGGGTTBB
T ss_pred CHHHHHHHHHHHhCcccCEEEEECcHHHHHHHHHHHHHH--hhcCCCCCCCCCceeccccccccc-cccccccccccCcC
Confidence 79999999999999999999999988 999999999998 789999999999999999999996 99999999999999
Q ss_pred CCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccC
Q 041105 138 VPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDT 217 (403)
Q Consensus 138 ~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDt 217 (403)
+.+|+++|++||++|||++||||||||++ +..+.|+.||+|+||||+.++|||||||||++||+|++++|+||||
T Consensus 78 ~~~~a~~v~~L~~aGai~~gkt~~~e~~~-----~~~~~~~~~g~~~Np~~~~~~~GGSS~Gsaaavaag~~~~a~GtDt 152 (441)
T PF01425_consen 78 PTEDAPVVQRLRAAGAIIIGKTNMPEFAM-----GPTTSNPLYGRTRNPWNPSRTPGGSSGGSAAAVAAGFVPLAIGTDT 152 (441)
T ss_dssp BSSS-HHHHHHHHTT-EEEEEE--SGGGC-----SSSSTTTTTEE-EBTTBTTBE--SSSHHHHHHHHTTSSSEEEEEES
T ss_pred cccccchhhheecccccceeeecccceec-----cccccccccccccCcccccccccccccccccccceecccccccccc
Confidence 99999999999999999999999999998 6778999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCcccc
Q 041105 218 DASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQF 297 (403)
Q Consensus 218 gGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~ 297 (403)
|||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|++++|..+...+ .+...+..
T Consensus 153 gGSiR~PAa~~Gv~GlkPT~G~vs~~G~~~~~~~~d~~GpmaRsv~Dl~~~l~vl~g~~~~d~~~~~~~--~~~~~~~~- 229 (441)
T PF01425_consen 153 GGSIRIPAAFCGVVGLKPTRGRVSRDGVFPLSPSFDTVGPMARSVEDLALLLDVLAGPDPWDPDSLPVP--PPPPDFDA- 229 (441)
T ss_dssp SSTTHHHHHHHTSEEEE-STTSS--TTB-CSSTTT-EEEEEESSHHHHHHHHHHHBSCBTTBTTSCSTT----SS-CST-
T ss_pred cccccCchhccccceeccccccccccccccccccccccccccCcHHHHHHHHHHhcCCCccCCCccccc--cccccccc-
Confidence 999999999999999999999999999999999999999999999999999999999999986554321 01112222
Q ss_pred cCCCCCCCcEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHH
Q 041105 298 LKPHGLQGKRLGIVRNLG-SNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILN 356 (403)
Q Consensus 298 ~~~~~~~~lrIGv~~~~~-~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~ 356 (403)
.....++++||||+.+++ +. ..+++++++++++++.|+++|++|++ +++|.+++...
T Consensus 230 ~~~~~~~~lrIGv~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~vv~-~~~p~~~~~~~ 287 (441)
T PF01425_consen 230 PLPKSLKGLRIGVPRDDGQWV-PVDPEVRRAFEEAAEALEAAGAEVVE-VDLPDLDEAMD 287 (441)
T ss_dssp TTTSTTTT-EEEEEGGGG-SS-TSSHHHHHHHHHHHHHHHHTT-EEEE-E--TTGGHHHH
T ss_pred cccccccCccccccccccccc-cccHHHHHHHHHHHHhhccccccccc-ccCchHHHHHH
Confidence 233578999999999876 44 58999999999999999999999998 89998777664
No 20
>PRK12470 amidase; Provisional
Probab=100.00 E-value=2.5e-75 Score=604.44 Aligned_cols=288 Identities=28% Similarity=0.345 Sum_probs=260.8
Q ss_pred cccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
+..+|+.+|+++|++|++|++|++++|++||+++|+.+|+|+++++| ++++|+++|+++ ++|..+ |||||||+|||
T Consensus 6 ~~~~s~~~l~~~~~~g~~s~~e~~~~~l~ri~~~~~~lna~~~~~~~~a~~~A~~~d~~~--~~g~~~-pL~GvPi~vKD 82 (462)
T PRK12470 6 LAFAGAAAQARMLADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFDRARAEAEAAQQRL--DAGERL-PLLGVPIAIKD 82 (462)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCcCEEEEeCHHHHHHHHHHhHHHH--hcCCCC-CcCCCeEEEec
Confidence 55679999999999999999999999999999999999999999998 999999999988 678777 99999999999
Q ss_pred cccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGS 196 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGS 196 (403)
||+++| ++||+||..+ ++++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+||||
T Consensus 83 ~~~v~G-~~tt~Gs~~~-~~~~~~dA~vV~rLr~aGaii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~~GGS 155 (462)
T PRK12470 83 DVDVAG-EVTTYGSAGH-GPAATSDAEVVRRLRAAGAVIIGKTNVPELMI-----MPFTESLAFGATRNPWDPNRTPGGS 155 (462)
T ss_pred CcccCC-ceeCCCCccc-CCCCCccHHHHHHHHHCCCeEEEEeChHhHhc-----CCCCCCCCCCCCCCCCCCCCCCCcc
Confidence 999996 9999999985 68889999999999999999999999999998 6778899999999999999999999
Q ss_pred ChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCC
Q 041105 197 SSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFD 276 (403)
Q Consensus 197 SgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d 276 (403)
|||||++||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||+|+|+|+++++++|.+.+
T Consensus 156 SgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~ld~~Gp~ar~v~D~a~~~~vl~~~~ 235 (462)
T PRK12470 156 SGGSAAAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVP 235 (462)
T ss_pred hhHHHHHHHcCCCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCcccCccccCCeeCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 277 AKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGS--NFTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 277 ~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~--~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
..+. +|..... ...+++|||++.+++. ....+++++++++++++.|+++|++|++ ++++
T Consensus 236 ~~~~------------~~~~~~~-~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~ 296 (462)
T PRK12470 236 GPEG------------EFVAAAA-REPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGHDVVV-RDPD 296 (462)
T ss_pred CCCc------------chhhhhc-cCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhCCCEEEE-eCCC
Confidence 4431 1211111 2347799999976431 1247999999999999999999999987 5643
No 21
>PRK07869 amidase; Provisional
Probab=100.00 E-value=2.7e-75 Score=605.38 Aligned_cols=288 Identities=24% Similarity=0.314 Sum_probs=257.3
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeec
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVK 115 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vK 115 (403)
++..+++.+|+++|++|++|++|++++|++||+++|+.+|||+++++| ++++|+++|. .+||||||||+||
T Consensus 11 ~~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~e~a~~~A~~~d~--------~~gpL~GvPi~vK 82 (468)
T PRK07869 11 ALGDLDAVGLAEAIRAGRVSAAEVVEAAIARAEAVNPALNALAYAAFDRARDRAARPGS--------QGGFFSGVPTFIK 82 (468)
T ss_pred hhhcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCcCEEEEcCHHHHHHHHHhcCC--------CCCCcCCCeEEEe
Confidence 456679999999999999999999999999999999999999999998 9999987652 3589999999999
Q ss_pred ccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 116 DNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCG 195 (403)
Q Consensus 116 D~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GG 195 (403)
|||+++| ++||+||..+.++++.+||++|+|||+||||++||||||||++ +..+.|++||+|+||||++|+|||
T Consensus 83 D~~~v~G-~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~d~~~~pGG 156 (468)
T PRK07869 83 DNVDVAG-LPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGF-----SASTEHPRLGPVRNPWNTDYSAGA 156 (468)
T ss_pred cCcccCC-cccCcccHhhcCCCCCCcHHHHHHHHHCCCEEEEecCchHhhc-----CCCCCCCCCCCcCCCCCCCCCCCC
Confidence 9999996 9999999999999999999999999999999999999999998 678899999999999999999999
Q ss_pred CChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCC-CCCCcccCCCcCCHHHHHHHHHHHhC
Q 041105 196 SSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPV-SPRLDTVGPISKTVADTVYVLDAIVG 274 (403)
Q Consensus 196 SSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~-s~~~d~~Gpmarsv~D~a~~~~~l~g 274 (403)
||||||++||+|++++|+|||||||||+||+||||||||||+||+|+.|+.+. ..++|++|||||+|+|++.++++|.|
T Consensus 157 SSgGsAaAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~~d~~Gp~arsv~D~a~l~~v~~g 236 (468)
T PRK07869 157 SSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPVNIVANGVLTRTVRDTAAFYREAER 236 (468)
T ss_pred CchHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCccccceecCeeCcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998874 34689999999999999999999999
Q ss_pred CCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCC
Q 041105 275 FDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINN 350 (403)
Q Consensus 275 ~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~ 350 (403)
.++.+... +. .+. .....+++|||++.++++...++|+++++++++++.|+++|++|++ +++|.
T Consensus 237 ~~~~~~~~-------~~-~~~---~~~~~~~lrigv~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~-~~~~~ 300 (468)
T PRK07869 237 YYRNPKLP-------PI-GDV---TGPGKQRLRIAVVTDSVTGREADPEVREAVLATARLLEELGHRVEP-VDLPV 300 (468)
T ss_pred cCccCCCC-------ch-hhh---cccCCCCCEEEEECCccCCCCCCHHHHHHHHHHHHHHHHCCCEEEE-eCCCc
Confidence 87543110 10 010 0123578999999876541258999999999999999999999987 67775
No 22
>PRK06529 amidase; Provisional
Probab=100.00 E-value=1.2e-74 Score=602.36 Aligned_cols=313 Identities=22% Similarity=0.282 Sum_probs=265.8
Q ss_pred ccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeeccc
Q 041105 39 KEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDN 117 (403)
Q Consensus 39 ~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~ 117 (403)
..+++.+|+++|++|++|++|++++|++||+++|+.+|||+++++| ++++|+++|+ .+ +|||||||+||||
T Consensus 2 ~~~~~~~l~~~~~~g~~s~~e~~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~-----~~---~PL~GvPi~vKD~ 73 (482)
T PRK06529 2 TYKDATAMAQAVQQGQVTPLELVTQAIYKAKKLNPTLNAIVSERYEEALEEAKQRDF-----SG---KPFAGVPIFLKDL 73 (482)
T ss_pred CcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHhccc-----cC---CCcCCCeEEEecC
Confidence 4678999999999999999999999999999999999999999998 9999998884 12 5999999999998
Q ss_pred -ccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 118 -IATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGS 196 (403)
Q Consensus 118 -i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGS 196 (403)
|+++| ++||+||..+.++++.+||++|+|||+||||++||||||||++ +..+.|++||+|+||||+.|+||||
T Consensus 74 ~~~v~G-~~tt~Gs~~~~~~~~~~Da~vV~rLr~AGAiilGKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~GGS 147 (482)
T PRK06529 74 GQELKG-QLSTSGSRLFKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGF-----KNISDSSLHGPVNLPFDNSRNAGGS 147 (482)
T ss_pred CcccCC-CccCcchHHhcCCCCCcchHHHHHHHHCCCeEEEecCchHhhc-----CCCCCCcCCCCCCCCCCCCCCCCcC
Confidence 79996 9999999999999999999999999999999999999999998 6778899999999999999999999
Q ss_pred ChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCccc-CCCcCCHHHHHHHHHHHhCC
Q 041105 197 SSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTV-GPISKTVADTVYVLDAIVGF 275 (403)
Q Consensus 197 SgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~-Gpmarsv~D~a~~~~~l~g~ 275 (403)
|||||++||+|++++|+|||||||||+||+||||||||||+||||+.+..+.+.+.|++ |||||+|+|+++++++|.|+
T Consensus 148 SgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~~~~~~~~Gpiarsv~D~a~~l~~~~g~ 227 (482)
T PRK06529 148 SGGAAALVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRGWQGASVHFALTKSVRDTRRLLYYLQMY 227 (482)
T ss_pred cHHHHHHHHcCCCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCccccccccccCCccCcHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999987776656666765 79999999999999999999
Q ss_pred CCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccC-CC-CHHH
Q 041105 276 DAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFE-IN-NLEA 353 (403)
Q Consensus 276 d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~-~p-~~~~ 353 (403)
|+.|+.+... .+...+ .....+++|||++.++++....+|+++++++++++.|+++|++|++ ++ +| .++.
T Consensus 228 ~~~~~~~~~~---~~~~~~----~~~~~~~lrIg~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~e-v~~~p~~~~~ 299 (482)
T PRK06529 228 QMESPFPLAT---LSKESL----FQSLQRPLKIAFYQRSPDGSPVSLDAAKALKQAVTFLREQGHEVVE-LEEFPLDMTE 299 (482)
T ss_pred CCCCCcccCC---cccchh----ccccCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE-cCCCCCCHHH
Confidence 8777543211 000011 1112478999999875432358999999999999999999999998 65 45 4554
Q ss_pred HHHhhhcccchhccHHHHHHHHHHH
Q 041105 354 ILNSIANGETLAILAAEFKQALNAY 378 (403)
Q Consensus 354 ~~~~~~~~~~~~~~~~e~~~~l~~y 378 (403)
+... ++.+. ..|....+..+
T Consensus 300 ~~~~----~~~~~-~~e~~~~~~~~ 319 (482)
T PRK06529 300 VMRS----YYIMN-SVETAAMFDDI 319 (482)
T ss_pred HHHH----HHHHH-HHHHHHHHHHH
Confidence 4332 23333 55655555444
No 23
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=1.3e-74 Score=613.84 Aligned_cols=316 Identities=32% Similarity=0.427 Sum_probs=272.3
Q ss_pred ccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCH-H-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecc
Q 041105 39 KEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNP-D-AINQADKADQERKAKAPRSQLGLHGIPILVKD 116 (403)
Q Consensus 39 ~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~-~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD 116 (403)
..+|+.+|+++|++|++|++|++++|++||++ ++.+|+|+.+.+ + ++++|+++|+++ . ..+|||||||+|||
T Consensus 5 ~~~t~~~l~~~~~~g~~t~~evv~a~l~ri~~-~~~~~a~i~~~~~~~a~~~A~~ld~~~--~---~~gPL~GVP~aVKD 78 (600)
T PRK08186 5 TDLTLASLRAAYRAGTLTPRAVVAALYARIAA-VDDPEVWIHLRPEADLLAQAAALEARD--P---AALPLYGVPFAVKD 78 (600)
T ss_pred ccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cCCCCEEEEeCchHHHHHHHHHHhhhc--c---ccCCCCCCeEEeec
Confidence 34699999999999999999999999999998 568999999986 4 999999999876 3 46899999999999
Q ss_pred cccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 117 NIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGS 196 (403)
Q Consensus 117 ~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGS 196 (403)
||+++| ++||+||..+. ++|.+||++|+|||++|||++||||||||++ +..|.|+.||+|+||||++|+||||
T Consensus 79 nidvaG-~pTTaGs~~~~-~~p~~DA~vV~rLr~AGAIilGKTN~~Efa~-----g~~g~n~~yG~t~NP~~~~~~~GGS 151 (600)
T PRK08186 79 NIDVAG-LPTTAACPAFA-YTPERDATVVARLRAAGAIVIGKTNLDQFAT-----GLVGTRSPYGAVRNAFDPEYVSGGS 151 (600)
T ss_pred ceecCC-cccCcCCHhHc-CCCCcChHHHHHHHHCCCEEEeeecchhhhc-----CCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 999996 99999999996 7889999999999999999999999999998 6788999999999999999999999
Q ss_pred ChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCC
Q 041105 197 SSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFD 276 (403)
Q Consensus 197 SgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d 276 (403)
|||||++||+|++++|+|||||||||+||+||||||||||+|++|+.|++|.++++|++|||||+|+|++.++++|.|+|
T Consensus 152 SsGSAaAVAaG~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vGp~Arsv~D~~~~l~vl~g~d 231 (600)
T PRK08186 152 SSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDDADAVLAVMAGFD 231 (600)
T ss_pred cHHHHHHHHcCCcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCcccccccCCceecccCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHH
Q 041105 277 AKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILN 356 (403)
Q Consensus 277 ~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~ 356 (403)
+.|+.+... |. ++. ....+++|||++.+..+....++++++++++++++|+++|++|++ +++|.+.+...
T Consensus 232 ~~D~~s~~~----p~-~~~----~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~e-i~~~~~~~~~~ 301 (600)
T PRK08186 232 PADPYSRAN----PA-DAP----AALPAGPRVGVPRAAQLEFFGDAEAEAAFAAALARLEALGAELVE-IDFSPFLEAAR 301 (600)
T ss_pred CCCcccccC----Cc-ccc----cccCCCCEEEEEcchhccccCCHHHHHHHHHHHHHHHHcCCeEEE-ecchhHHHHHH
Confidence 988655321 21 110 123567999999643322225899999999999999999999997 78876644322
Q ss_pred hhhcccchhccHHHHHHHHHHHHhh
Q 041105 357 SIANGETLAILAAEFKQALNAYLQE 381 (403)
Q Consensus 357 ~~~~~~~~~~~~~e~~~~l~~yl~~ 381 (403)
.. +.... .+|....+..|+..
T Consensus 302 ~~---~~~~~-~ae~~~~~~~~~~~ 322 (600)
T PRK08186 302 LL---YEGPW-VAERYAAVGEFLEA 322 (600)
T ss_pred HH---HHHHH-HHHHHHHHHHHHhh
Confidence 21 11222 45666666666653
No 24
>PRK06061 amidase; Provisional
Probab=100.00 E-value=1.9e-74 Score=600.95 Aligned_cols=295 Identities=27% Similarity=0.370 Sum_probs=261.2
Q ss_pred ccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeec
Q 041105 37 SVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVK 115 (403)
Q Consensus 37 ~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vK 115 (403)
+...+++.+|+++|++|++|++||+++|++||+++|+.+|+|+++++| ++++|+++|+++ ++|.. +|||||||+||
T Consensus 14 ~~~~~s~~~l~~~l~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~~-~pL~GvPv~vK 90 (483)
T PRK06061 14 NDRLPGLTDQAYQLASGAVTSVELVRRSLRRIEASQPTLNAFRVVRAEAALAEAAEADRRR--AAGDR-LPLLGVPIAVK 90 (483)
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcCCEEEEeChHHHHHHHHHHHHHH--hcCCC-CCcCCCeEEEE
Confidence 456789999999999999999999999999999999999999999998 999999999988 66665 49999999999
Q ss_pred ccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 116 DNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCG 195 (403)
Q Consensus 116 D~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GG 195 (403)
|||+++| ++||+||.... .++.+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+|||
T Consensus 91 D~~~v~G-~~tt~Gs~~~~-~~a~~dA~vV~~Lr~AGAii~GKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~~GG 163 (483)
T PRK06061 91 DDVDVAG-VPTAFGTAGEV-PPATADSEVVRRLRAAGAVIVGKTNTCELGQ-----WPFTSGPAFGHTRNPWSRDHTPGG 163 (483)
T ss_pred cccccCC-ceecCCCcccC-CCCCCCHHHHHHHHHCCCEEEEecCcchhcc-----CCCCCCCCCCCCCCCCCCCCCCCC
Confidence 9999996 99999998532 3347999999999999999999999999998 677889999999999999999999
Q ss_pred CChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCC
Q 041105 196 SSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGF 275 (403)
Q Consensus 196 SSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~ 275 (403)
||||||++||+|++++|+|||||||||+||+||||||||||+||||+.|+.+...++|++|||||+|+|+++++++|.|+
T Consensus 164 SSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~ 243 (483)
T PRK06061 164 SSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVADAALLLDAASGN 243 (483)
T ss_pred ChHHHHHHHHcCCCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCcccccCceeCCEeCCHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred CCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCC---CCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 276 DAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGS---NFTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 276 d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~---~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
|++|+.+..+ + .+.... ....+++|||++.++.+ ....+|+++++++++++.|+++|++|++ ++++
T Consensus 244 d~~d~~~~~~----~--~~~~~~-~~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~-~~~~ 312 (483)
T PRK06061 244 HPGDRHRPPP----V--TVSDAV-GRAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALLGHTVVP-ADPD 312 (483)
T ss_pred CCCCCcccCC----c--cchhhh-ccCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHCCCEEEE-eCCc
Confidence 9888543211 1 111111 13457899999876432 1247999999999999999999999987 5644
No 25
>PRK05962 amidase; Validated
Probab=100.00 E-value=2.2e-73 Score=584.23 Aligned_cols=262 Identities=32% Similarity=0.450 Sum_probs=243.5
Q ss_pred HHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhcCCCC-C
Q 041105 62 EMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALLGSVV-P 139 (403)
Q Consensus 62 ~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~~~~~-~ 139 (403)
+++|+||+++|+.+|+|+++++| ++++|+++|+++ ++|+.+||||||||+|||||+++| ++||+||..+.++++ .
T Consensus 2 ~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~--~~g~~~gpL~GvPi~vKD~~~v~G-~~tt~Gs~~~~~~~~~~ 78 (424)
T PRK05962 2 EATLARLAARAGEEHVFSKLYAERARAEADAADARR--RAGRSLGPLDGRIVSIKDLFDVAG-EPTLAGSVIRRDAPPAG 78 (424)
T ss_pred HHHHHHHHhhCCcccEEEEECHHHHHHHHHHHHHHH--HcCCCCCCCCCCEEEEEeeeecCC-cccCCCChhhhcCCCCc
Confidence 68999999999999999999998 999999999987 788889999999999999999996 999999999999988 6
Q ss_pred CchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccCCC
Q 041105 140 RDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDTDA 219 (403)
Q Consensus 140 ~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDtgG 219 (403)
+||++|+|||++|||++||||||||++ +..+.|++||+|+||||+.|+|||||||||++||+|++++|+||||||
T Consensus 79 ~dA~vV~rL~~aGAiilGKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgG 153 (424)
T PRK05962 79 ADALIVQRLRNAGAVIIGKTHMTEFAF-----TPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGG 153 (424)
T ss_pred CChHHHHHHHHCCCEEEEecCchHHhc-----CCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCC
Confidence 999999999999999999999999998 678899999999999999999999999999999999999999999999
Q ss_pred ccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCcccccC
Q 041105 220 SILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQFLK 299 (403)
Q Consensus 220 SiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~ 299 (403)
|||+||+||||||||||+||+|+.|++|+++++|++|||||+|+|+++++++|.|+|+.+.. +
T Consensus 154 SiRiPAa~cGv~GlKPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~~--------~--------- 216 (424)
T PRK05962 154 SVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVADCAAADAVMAGEKPIPLE--------V--------- 216 (424)
T ss_pred cchhhhHhhCceeeecCCCceeCCCcccCccccCccccccCCHHHHHHHHHHHcCCCCCccc--------c---------
Confidence 99999999999999999999999999999999999999999999999999999998765410 0
Q ss_pred CCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCH
Q 041105 300 PHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNL 351 (403)
Q Consensus 300 ~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~ 351 (403)
...+++|||++.++++. ..+|+++++++++++.|+++|++|++ +++|.+
T Consensus 217 -~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~~ 265 (424)
T PRK05962 217 -LPVAGLRIGLPKGYLLA-DMEPDVAAAFEASLAALEKAGARIAD-LAIDDL 265 (424)
T ss_pred -cCcCCcEEEEEcccccc-cCCHHHHHHHHHHHHHHHHCCCEEEE-eccchH
Confidence 12467999999876543 57999999999999999999999987 777754
No 26
>PRK07235 amidase; Provisional
Probab=100.00 E-value=2e-73 Score=594.92 Aligned_cols=302 Identities=28% Similarity=0.363 Sum_probs=273.0
Q ss_pred cccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceee
Q 041105 36 FSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILV 114 (403)
Q Consensus 36 ~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~v 114 (403)
+++.+.++.+++++|+ +++++.|++++++++|+..++..|++....++ +...|...+.+ .+|+.+||||||||+|
T Consensus 20 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~g~~~gpL~GvPiav 95 (502)
T PRK07235 20 LDLTDEELASYLSLMQ-ASLDAYDRIDELPDEIPPVKYPRTPGYRPEAEENPYGAWYVKTS---IKGAAEGKLAGKTVAL 95 (502)
T ss_pred CCCChhhHHHHHHHHH-hccCHHHHHHHHhhcccccCCCcccccccCcccChhcChhhhhc---cCCCCCCCcCCceEEE
Confidence 4678899999999999 99999999999999999999999999999887 87788877765 5788899999999999
Q ss_pred cccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 115 KDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPC 194 (403)
Q Consensus 115 KD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~G 194 (403)
||||+++| ++||+||..+.+++|.+||++|+||++|||||+|||||+||++ +..+.|++||+|+||||+.|+||
T Consensus 96 KD~i~v~G-~ptt~Gs~~~~~~~p~~DA~vV~rL~~AGAii~GKTn~~Ef~~-----~~~t~n~~~G~t~NP~~~~~~~G 169 (502)
T PRK07235 96 KDNVAVAG-VPMMNGSSTLEGFVPSFDATVVTRLLDAGATIVGKATCEDLCF-----SGGSHTSDPGPVHNPRDPGYSAG 169 (502)
T ss_pred ecccccCC-cccCccChhhcCCCCCCCHHHHHHHHHCCCEEEEEecchhhhc-----CCCCCCCCCCCCCCCCCCCCCCC
Confidence 99999996 9999999999999999999999999999999999999999998 66788999999999999999999
Q ss_pred CCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhC
Q 041105 195 GSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVG 274 (403)
Q Consensus 195 GSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g 274 (403)
|||||||++||+|++++|+|||||||||+||+||||||||||+||||++|++|+++++|++|||||+|+|+++++++|+|
T Consensus 170 GSSgGsAAaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~~sld~~Gpmarsv~D~a~ll~viag 249 (502)
T PRK07235 170 GSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPMTATVRDNALLLEVIAG 249 (502)
T ss_pred CCcHHHHHHHHcCCCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCcccccCeeeceeCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHH
Q 041105 275 FDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLE 352 (403)
Q Consensus 275 ~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~ 352 (403)
+|+.|+.+.... +..+|...+. ...+++|||++.+.+.....+|++.++++++++.|+++|++|++ +++|...
T Consensus 250 ~d~~d~~~~~~~---~~~~~~~~l~-~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~V~~-v~~p~~~ 322 (502)
T PRK07235 250 RDGLDPRQPAQP---PVDDYTAALD-RGVKGLKIGILREGFGLPNSEPEVDEAVRAAAKRLEDLGATVEE-VSIPLHR 322 (502)
T ss_pred CCCCCccccccC---CccchhHHhc-cCCcCCEEEEeccccCCCCCCHHHHHHHHHHHHHHHHCCCEEEE-eCCCchh
Confidence 998886544211 1124544443 35788999999876542357999999999999999999999987 7888644
No 27
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=2.1e-67 Score=554.24 Aligned_cols=282 Identities=32% Similarity=0.408 Sum_probs=238.1
Q ss_pred cEEEEeCH-H-HHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCC
Q 041105 76 RGVIEVNP-D-AINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGA 153 (403)
Q Consensus 76 na~~~~~~-~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGA 153 (403)
|+|+++.+ | ++++|+++|+++ .++. .+|||||||+|||||+++| ++||+||..+. ++|.+||++|+|||++||
T Consensus 2 ~a~i~~~~~e~al~~A~~ld~~~--~~~~-~~PL~GvP~aVKD~idvaG-~pTTaGs~~~~-~~p~~DA~vV~rLr~AGA 76 (561)
T TIGR02713 2 EAWISLLSEEDLLAQAAALDARD--ARPE-RLPLYGVPFAVKDNIDVAG-LPTTAACPAFA-YTPEEDATVVALLRAAGA 76 (561)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHH--hcCC-CCCccCCeEEEEcccccCC-CccCcCCHhHc-CCCCcCHHHHHHHHHCCC
Confidence 78999864 5 999999999987 5554 5899999999999999996 99999999996 789999999999999999
Q ss_pred eEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccCCCccccccccCCceee
Q 041105 154 IILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGI 233 (403)
Q Consensus 154 IilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~Gl 233 (403)
|++||||||||++ +..|.|++||.|+||||+.|+|||||||||++||+|++++|+|||||||||+||+|||+|||
T Consensus 77 IiiGKTN~~Efa~-----g~~g~n~~~G~t~NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGl 151 (561)
T TIGR02713 77 IVVGKTNLDQFAT-----GLVGTRSPYGAVRNAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGL 151 (561)
T ss_pred EEEEEeCchHhhc-----CCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeE
Confidence 9999999999998 67889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEEEEcC
Q 041105 234 KPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLGIVRN 313 (403)
Q Consensus 234 KPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~ 313 (403)
|||+|++|+.|++|++.++|++|||||||+|++.++++|.|+|+.|+.+... | +.. .. ...+++||||+..
T Consensus 152 KPT~G~vs~~Gv~p~~~slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~s~~~----p---~~~-~~-~~~~~lrigv~~~ 222 (561)
T TIGR02713 152 KPTKGLVSTTGVVPACRSLDCVSIFALTVADAEQVLRIAAAPDARDPYSRPL----P---AAA-LR-RLPPPPRVGVPRA 222 (561)
T ss_pred ecCCCCccCCCccccccCCCeeechhCCHHHHHHHHHhhcCCCCcCccccCC----C---chh-hc-ccCCCCEEEEECc
Confidence 9999999999999999999999999999999999999999999888655321 1 100 11 1236799999973
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhhhcccchhccHHHHHHHHHHHHhh
Q 041105 314 LGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSIANGETLAILAAEFKQALNAYLQE 381 (403)
Q Consensus 314 ~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~ 381 (403)
+.+....++++++++++++++|+++|++|++ +++|.+.+..... +.... ..|....+..|+..
T Consensus 223 ~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~-v~~~~~~~~~~~l---~~~~~-~~e~~~~~~~~~~~ 285 (561)
T TIGR02713 223 AQLEFFGDSQAEAAFAAAVERLEALGVEVVE-IDFAPFLETAALL---YEGPW-VAERYAAVGEFVEA 285 (561)
T ss_pred hhcCCCCCHHHHHHHHHHHHHHHHCCCEEEE-ecchhHHHHHHHH---HHHHH-HHHHHHHHHHHHhh
Confidence 2221125889999999999999999999987 7887653332221 11122 45555666666654
No 28
>PRK07139 amidase; Provisional
Probab=100.00 E-value=1.7e-65 Score=527.86 Aligned_cols=254 Identities=25% Similarity=0.294 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhcCCCC
Q 041105 59 QLVEMYIREIGRLNPLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALLGSVV 138 (403)
Q Consensus 59 evv~~~l~ri~~~~~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~~~~~ 138 (403)
-+.+.+|++++. ..+|++++...+. ....||||||||+|||||+++| ++||+||..+.+++|
T Consensus 6 ~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~~~gpL~GvPvavKD~~~v~G-~~tt~Gs~~l~~~~~ 67 (439)
T PRK07139 6 GNFQKALEELKN--DKNNAVSYVFDEK---------------NNKDGPLANCVFTIKDNFATSE-GPTHASSKSLENFKP 67 (439)
T ss_pred hhHHHHHHHhhc--cccCeEEEEeccc---------------CCCCCCcCCcEEEEEcceecCC-CccCcChHHHccCCC
Confidence 356777777764 5689998875431 1236899999999999999996 999999999999999
Q ss_pred CCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccCC
Q 041105 139 PRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDTD 218 (403)
Q Consensus 139 ~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDtg 218 (403)
.+||++|+|||+||||++||||||||++ +..+.|++||+|+||||+.|+|||||||||++||++ +++|+|||||
T Consensus 68 ~~dA~vV~rLr~AGAIilGKTn~~Efa~-----~~~~~n~~~G~t~NP~~~~~~pGGSSgGSAAaVAag-~~~alGtDtg 141 (439)
T PRK07139 68 SYNATVVQKLINAGAKPVAKVHCDELGL-----GGTGLFSAFGLIKNPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTG 141 (439)
T ss_pred CCchHHHHHHHHCCCEEEEeechhhHhc-----CCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHCC-CCEEEEcCCC
Confidence 9999999999999999999999999998 677889999999999999999999999999999997 7999999999
Q ss_pred CccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCccccc
Q 041105 219 ASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQFL 298 (403)
Q Consensus 219 GSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~ 298 (403)
||||+||+||||||||||+||||++|++|+++++|++|||||+|+|+++++++|.|+|+.|+.+... + +..
T Consensus 142 GSIRiPAa~cGvvGlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~~~vl~g~d~~d~~~~~~----~---~~~-- 212 (439)
T PRK07139 142 DSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDV----K---INN-- 212 (439)
T ss_pred cchhhhHHHcCeEEEeCCCCCcCCCCcccCcccCCccccccCCHHHHHHHHHHHcCCCcCCcccccc----C---ccc--
Confidence 9999999999999999999999999999999999999999999999999999999999888654321 1 111
Q ss_pred CCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCC
Q 041105 299 KPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINN 350 (403)
Q Consensus 299 ~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~ 350 (403)
...++++|||+.+. + . ..++++.++++++++.|+++|++|++ +++|.
T Consensus 213 -~~~~~~lrig~~~~-~-~-~~~~~v~~a~~~a~~~L~~~G~~v~~-~~~~~ 259 (439)
T PRK07139 213 -VKKTKPKKVAYLDC-F-K-ELEEYVAKKYKKLINILKSENIEVEK-IKIDE 259 (439)
T ss_pred -ccccCCCEEEEECc-c-c-cCCHHHHHHHHHHHHHHHHCCCEEEE-eCCCh
Confidence 12457899999753 2 2 47999999999999999999999987 67763
No 29
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.3e-65 Score=518.46 Aligned_cols=294 Identities=40% Similarity=0.532 Sum_probs=267.2
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcC-Cc
Q 041105 50 FKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNT-TA 128 (403)
Q Consensus 50 l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~T-t~ 128 (403)
+.+|.+++.++++.|++++..+++..+.+..++++++.+|++.++++ +++...+||+||||+|||||+++| ++| ||
T Consensus 27 l~~~~l~~~~~ie~~l~~~~~~~~~~~~i~~~~~~~~~~a~~~~~~~--~~~~~~~~L~Gv~i~IKDnf~tk~-~~t~t~ 103 (506)
T KOG1211|consen 27 LSSGLLTSKRIIESYLERINKWKPLNAKITVINEEALKQAEEVTRRR--KNGMEKGPLQGVPIAIKDNFDTKD-KPTTTA 103 (506)
T ss_pred hcccccchHHHHHHHHHHHhhcccccceeeeccHHHHHHhhhccccc--cCCCcCCCcCCceEEEeeceecCC-ccCCch
Confidence 89999999999999999999999998999999999999999999988 889999999999999999999997 888 99
Q ss_pred CchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcC
Q 041105 129 GSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANM 208 (403)
Q Consensus 129 Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~ 208 (403)
+|..+.++.++.||++|++||++||||+|||||+||+| +..+.+.+||+|+|||++.+.|||||||||++||+++
T Consensus 104 ~S~~l~~~~~p~dAtVV~~L~~aGaiilGKTnmdEfam-----g~~~~~s~~G~t~np~~~~~v~GGSS~GSA~aVaa~l 178 (506)
T KOG1211|consen 104 ASWMLEHYNPPKDATVVKKLREAGAIILGKTNMDEFAM-----GSSGENSHYGTTRNPLSLWRVPGGSSSGSAAAVAAGL 178 (506)
T ss_pred hhhhhccCCCccccHHHHHHhhcCceEEccccHHHHhh-----ccccccccCCccCCCCcccccCCCCcchhHHHHHhcc
Confidence 99999999999999999999999999999999999999 6677889999999999999999999999999999999
Q ss_pred cceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccC
Q 041105 209 VAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKY 288 (403)
Q Consensus 209 ~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~ 288 (403)
+++|+|||||||+|+||++|||+|||||+|++|+.|++|++.++|++||+||+|.|+..+++++.|.|..|.++...+..
T Consensus 179 ~~~alGtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~~SlD~vGi~a~tv~D~~~v~~~~~g~d~~d~~t~~~p~~ 258 (506)
T KOG1211|consen 179 CDFALGTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYDAVEVLGAIVGIDELDSTTLAQPAP 258 (506)
T ss_pred chhhccccCCCCccCcHHhcCccccccCcceecccccchhhhcccccchhhcccchhHHHhhhhcCCCccCcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999777654321
Q ss_pred CCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHH
Q 041105 289 IPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAIL 355 (403)
Q Consensus 289 ~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~ 355 (403)
.+ -..+......++++|+|+++++.+. ..+.++.+.+++..+.|+..|..+.+ +.+|+.....
T Consensus 259 ~~--~~~~~~~~~~l~~~r~GIp~~~~~~-~~~~~v~~~~~~~~~~l~~~~~~~~~-~~lp~~~~~~ 321 (506)
T KOG1211|consen 259 FP--IVLELIGSMDLSGLRIGIPKERLVQ-GLSSGVLSLWEELADLLGSLGAKVNE-VSLPTTINGL 321 (506)
T ss_pred cc--cchhhcccccccccccCceeecccc-cccHHHHHHHHHHHHHhhccccccee-eecchhhhcc
Confidence 11 1122233346889999999987665 47789999999999999999998877 7888765543
No 30
>PRK08310 amidase; Provisional
Probab=100.00 E-value=9.4e-64 Score=508.71 Aligned_cols=234 Identities=32% Similarity=0.389 Sum_probs=208.2
Q ss_pred CCCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhc--CCCCCCchHHHHHHH
Q 041105 72 NPLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALL--GSVVPRDAFVVTKLL 149 (403)
Q Consensus 72 ~~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~--~~~~~~da~vV~rL~ 149 (403)
++.+|||+..... + ..++..+|||||||+|||||+++| ++||+||..+. +.++.+||++|+|||
T Consensus 4 ~~~~~a~~~~~~~--------~-----~~~~~~gpL~GvPi~vKD~~~v~G-~~tt~Gs~~~~~~~~~~~~dA~vV~~L~ 69 (395)
T PRK08310 4 HDPFNAFIAKPDK--------P-----LPHAASGPLAGLRFAVKDVFDVAG-YVTGCGNPDWLAESPVATRTAPAVEKLL 69 (395)
T ss_pred CCccccccccCCC--------C-----CCCCCCCCcCCCeEEEeeccccCC-CccCCCCHHHHhcCCCCCCCHHHHHHHH
Confidence 3568999887421 1 346778999999999999999996 99999999984 467789999999999
Q ss_pred HcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccCCCccccccccCC
Q 041105 150 EAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNS 229 (403)
Q Consensus 150 ~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~G 229 (403)
++|||++||||||||++ +..+.|+.||.|+||||+.|+|||||||||++||+|++++|+|||||||||+||+|||
T Consensus 70 ~aGAii~GKTn~~E~~~-----~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cG 144 (395)
T PRK08310 70 AAGARFVGKTQTDELAF-----SLNGQNAHYGTPVNPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCG 144 (395)
T ss_pred HCCCEEEEeccchHHhc-----CCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcC
Confidence 99999999999999998 6678899999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEE
Q 041105 230 VVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLG 309 (403)
Q Consensus 230 v~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIG 309 (403)
|||||||+||+|+.|++|+++++|++|||||+|+|+++++++|.|.|+++. + ..+||+
T Consensus 145 v~G~KPT~Grvs~~G~~~~~~~~d~~Gp~arsv~D~~~~~~~l~g~~~~~~---------~-------------~~~ri~ 202 (395)
T PRK08310 145 LYGLRPTHGRISLEGVMPLAPSFDTVGWFARDIALLERVGEVLLGDDAQEF---------P-------------LTQRLL 202 (395)
T ss_pred eeEeecCCCcccCCCCcccccCCCeeeeeeCCHHHHHHHHHHHcCCCcccC---------C-------------cCceEE
Confidence 999999999999999999999999999999999999999999999876541 0 236899
Q ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 310 IVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 310 v~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
+..+.+ . ..+++++++++++++.|+++|.++++ ++.+
T Consensus 203 ~~~~~~-~-~~~~~v~~a~~~a~~~L~~~~g~vv~-~~~~ 239 (395)
T PRK08310 203 IPVDLF-A-LLDPAVRAALEAALARLRPHLGPAKP-ASVP 239 (395)
T ss_pred Eecccc-c-cCCHHHHHHHHHHHHHHHHhCCceee-ecCC
Confidence 987643 3 47999999999999999996447776 5543
No 31
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=2.7e-62 Score=501.35 Aligned_cols=237 Identities=28% Similarity=0.334 Sum_probs=208.0
Q ss_pred CCCccEEEEeCHHHHHHHHHHhHHHHHcCCCCCCCCCCCceeecccccccCCCcCCcCchhhcC-CC-CCCchHHHHHHH
Q 041105 72 NPLLRGVIEVNPDAINQADKADQERKAKAPRSQLGLHGIPILVKDNIATKDKMNTTAGSFALLG-SV-VPRDAFVVTKLL 149 (403)
Q Consensus 72 ~~~lna~~~~~~~al~~A~~~D~~~~~~~g~~~gpL~GvPi~vKD~i~~~gg~~Tt~Gs~~l~~-~~-~~~da~vV~rL~ 149 (403)
|+.+|+|++.... + . ..+...||||||||+|||||+++| ++||+||+.+.+ ++ +.+||++|+|||
T Consensus 4 ~~~~~a~~~~~~~-----~---~----~~~~~~gpL~GvPiaVKD~~~v~G-~~Tt~GS~~~~~~~~~~~~dA~vV~rL~ 70 (422)
T PLN02722 4 NPDYGAFMEKFVL-----S---P----TSSSHDLPLHGLTFAVKDIFDVEG-YVTGFGNPDWARTHSAATSTAPAVLAVL 70 (422)
T ss_pred CCCCCcceeeccc-----c---C----CCCCCCCCCCCCeEEEEcccccCC-CccCCCCHHHHhcCCCCCCChHHHHHHH
Confidence 4578999887421 0 0 123457899999999999999996 999999998875 44 579999999999
Q ss_pred HcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhcCcceeecccCCCccccccccCC
Q 041105 150 EAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPCGSSSGSAISVAANMVAVSLGTDTDASILCPSGSNS 229 (403)
Q Consensus 150 ~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~G 229 (403)
++|||++|||||+||++ +..|.|++||.|+||||+.|+|||||||||++||+|++++|+|||||||||+||+|||
T Consensus 71 ~AGAiilGKTn~~Efa~-----~~~g~n~~~G~t~NP~~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cG 145 (422)
T PLN02722 71 RGGATCVGKTIMDEMAY-----SINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 145 (422)
T ss_pred HCCCEEEEEechhhHhh-----CCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcc
Confidence 99999999999999998 6788999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeCCCcccCCCCCCCCCCCcccCCCcCCHHHHHHHHHHHhCCCCCChhhhhcccCCCCCCcccccCCCCCCCcEEE
Q 041105 230 VVGIKPTVGLISRDGVIPVSPRLDTVGPISKTVADTVYVLDAIVGFDAKDEATREASKYIPPGGYKQFLKPHGLQGKRLG 309 (403)
Q Consensus 230 v~GlKPT~G~vs~~G~~~~s~~~d~~Gpmarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~p~~~~~~~~~~~~~~~lrIG 309 (403)
|||||||+|+||++|++|+++++|++|||||+|+|++.++++|.|.++.|. .+.+||+
T Consensus 146 vvG~KPT~G~vp~~G~~pla~sld~~G~~ar~v~D~a~~~~~l~g~~~~d~----------------------~~~~ri~ 203 (422)
T PLN02722 146 IFGFRPSHGAVSTVGVIPMAQSFDTVGWFARDPVILKRVGHVLLQQPDVNP----------------------IKPSQII 203 (422)
T ss_pred eEEEecCCCccCCCCCCcccCCCCcccceeCCHHHHHHHHHHHcCCCCCCC----------------------cCCceEE
Confidence 999999999999999999999999999999999999999999999876541 1247999
Q ss_pred EEcCCCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEccCCC
Q 041105 310 IVRNLGSN-FTISSEVTEAFEHHVRTLRQQGAILLDNFEIN 349 (403)
Q Consensus 310 v~~~~~~~-~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p 349 (403)
++.+.+.. ...++++.++++++++.|+++|+++++ ++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~-~~~~ 243 (422)
T PLN02722 204 IAEDCFQLSSIPHDRLVQVLVKSVEKLFGGGDIVKH-VNLG 243 (422)
T ss_pred echhhhhhcccccHHHHHHHHHHHHHHhcCCCeeee-cchh
Confidence 98764431 124688999999999999999999875 5554
No 32
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-59 Score=481.93 Aligned_cols=304 Identities=25% Similarity=0.337 Sum_probs=267.3
Q ss_pred cccccccHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHH-HHHHHHHHhHHHHHcCCCCCCCCCCCceee
Q 041105 36 FSVKEATIEDLQLAFKQNQLTSRQLVEMYIREIGRLNPLLRGVIEVNPD-AINQADKADQERKAKAPRSQLGLHGIPILV 114 (403)
Q Consensus 36 ~~~~~~si~~l~~~l~~g~~t~~evv~~~l~ri~~~~~~lna~~~~~~~-al~~A~~~D~~~~~~~g~~~gpL~GvPi~v 114 (403)
..++.+++.+|+++|+++++||+|++.+|++|+...|+.+||++++..| ++.+|+..|+.+ ..+...+||+||||+|
T Consensus 50 ~~il~~~~~~L~~~L~~~e~~~~~vl~Ay~~Ra~~vn~~lNcV~~~i~e~~~~~a~~~d~~~--~~~~~k~PL~GvP~Sv 127 (560)
T KOG1212|consen 50 NAILKLDATELAQALQSGELTSVEVLCAYCHRAIEVNQKLNCVVEFIFEAALQAAALDDEYT--APLYEKPPLYGVPFSV 127 (560)
T ss_pred HHHhhcCHHHHHHHHHhCcCcHHHHHHHHHHHHHHhccCcceeeeehhhHHHHHhhchhhhh--chhcccCCceecceeh
Confidence 4588899999999999999999999999999999999999999999998 777777666655 4555779999999999
Q ss_pred cccccccCCCcCCcCchhhcCCCCCCchHHHHHHHHcCCeEEEecCcccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 041105 115 KDNIATKDKMNTTAGSFALLGSVVPRDAFVVTKLLEAGAIILGKASMSEWAHFRTFESPNGWCARTGQGKNPYVLSADPC 194 (403)
Q Consensus 115 KD~i~~~gg~~Tt~Gs~~l~~~~~~~da~vV~rL~~aGAIilGKTn~~E~a~~~~~~~~~g~n~~~G~t~NP~~~~~~~G 194 (403)
||+|.++| +.+|.|.....+.+.++|+.+|+.||++|||++.+||+||+++ +..+.|++||+|.||||.+|+||
T Consensus 128 Ke~~~vkg-~d~T~G~~~~~~~~a~~ds~~V~~lk~~GaIpf~~TnvPq~~l-----s~~tsn~v~G~T~NP~d~~rt~G 201 (560)
T KOG1212|consen 128 KESISVKG-YDSTAGLLARTNQPATTDSVIVEFLKKLGAIPFVLTNVPQSLL-----SYETSNPVYGTTKNPYDLSRTPG 201 (560)
T ss_pred hhheeecC-ccccchhhhccCCCCccchHHHHHHHHcCCCceeecCCchhhh-----hhhhcCCCCCCCCChhhccCCCC
Confidence 99999996 9999999999999999999999999999999999999999998 66788999999999999999999
Q ss_pred CCChhhHHHHHhcCcceeecccCCCccccccccCCceeeeeCCCcccCCCCCCCCCC----CcccCCCcCCHHHHHHHHH
Q 041105 195 GSSSGSAISVAANMVAVSLGTDTDASILCPSGSNSVVGIKPTVGLISRDGVIPVSPR----LDTVGPISKTVADTVYVLD 270 (403)
Q Consensus 195 GSSgGsaaaVAag~~~~aiGtDtgGSiR~PAa~~Gv~GlKPT~G~vs~~G~~~~s~~----~d~~Gpmarsv~D~a~~~~ 270 (403)
|||||+|+++++|.+++|||||.|||||+||+|||++|+|||.+|+|..|..+..+. .-++|||+|+++|+..+|+
T Consensus 202 GSSGGEaALigaggS~lGiGsDigGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~ 281 (560)
T KOG1212|consen 202 GSSGGEAALLGAGGSLLGIGSDIGGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLR 281 (560)
T ss_pred CCchHHHHHHhCCcceeccccccCCceeechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876553 3478999999999999999
Q ss_pred HHhCCC-CCC--hhhhhcccCCCCCCcccccCCCCCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccC
Q 041105 271 AIVGFD-AKD--EATREASKYIPPGGYKQFLKPHGLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFE 347 (403)
Q Consensus 271 ~l~g~d-~~d--~~~~~~~~~~p~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~ 347 (403)
++.+.. ++. +.. +...|.+... ...++++||+..++.+. ++.|.+++++.++++.|++.||++++ ++
T Consensus 282 ~~i~~~~~~~~~p~~-------~p~~~~~~~y-~~~~~~~ig~~~~dg~~-~~~pa~~RAv~~~~~~l~~~g~~~~~-f~ 351 (560)
T KOG1212|consen 282 LMIGDSGPKLLDPYP-------VPVKFMEVFY-KSSDKLVIGYYVDDGFF-DPSPAMQRAVQETIDLLEKAGHEVVP-FD 351 (560)
T ss_pred HhcCCccccccCCCC-------CCchhhhhhh-hccCCccceEEecCCCC-CcCHHHHHHHHHHHHHHHhcCcceeE-ec
Confidence 999965 222 211 1113444443 34567899998777665 58999999999999999999999997 89
Q ss_pred CCCHHHHHHh
Q 041105 348 INNLEAILNS 357 (403)
Q Consensus 348 ~p~~~~~~~~ 357 (403)
+|+++...+.
T Consensus 352 ~~~~~~~~~~ 361 (560)
T KOG1212|consen 352 LPDLKHVADM 361 (560)
T ss_pred CCcchHHHHH
Confidence 9988855543
No 33
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=54.75 E-value=34 Score=35.80 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=27.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q 041105 302 GLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLD 344 (403)
Q Consensus 302 ~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~ 344 (403)
...+.||+|-.+.-+.. -+++-++.|+++|++||.
T Consensus 242 ~~~~~rIAVA~D~AF~F--------yY~~nl~~Lr~~GAelv~ 276 (451)
T COG1797 242 NPLGVRIAVARDAAFNF--------YYPENLELLREAGAELVF 276 (451)
T ss_pred CCcCceEEEEecchhcc--------ccHHHHHHHHHCCCEEEE
Confidence 34558999987764443 467779999999999997
No 34
>COG2306 Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]
Probab=48.89 E-value=8.9 Score=34.82 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=32.2
Q ss_pred HHHHHHhcCCCCCCCcccccccccHHHHHHHHHcCCCCHHHHHHHHH
Q 041105 19 IILAVYSSGSPATESREFSVKEATIEDLQLAFKQNQLTSRQLVEMYI 65 (403)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~si~~l~~~l~~g~~t~~evv~~~l 65 (403)
+-|+|++.|+. +..-++..||..+++.|.+|+.+--++|-
T Consensus 108 LyLDi~a~p~g-------e~el~DeDEL~~Al~~GlIT~~qf~~Ay~ 147 (183)
T COG2306 108 LYLDIIALPGG-------EAELLDEDELEDALRYGLITPEQFEKAYR 147 (183)
T ss_pred eeEEEEEecCC-------CeEEecHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34677788876 34456899999999999999999888774
No 35
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=39.33 E-value=33 Score=27.85 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEccCC
Q 041105 321 SSEVTEAFEHHVRTLRQQGAILLDNFEI 348 (403)
Q Consensus 321 ~~~v~~~~~~a~~~L~~~G~~vv~~~~~ 348 (403)
+..-+.+|.++.+.|++.|++|+.+..+
T Consensus 11 ~~~N~~~f~~~a~~L~~~G~~vvnPa~~ 38 (92)
T PF14359_consen 11 PDYNRPAFNAAAKRLRAKGYEVVNPAEL 38 (92)
T ss_pred cchHHHHHHHHHHHHHHCCCEEeCchhh
Confidence 3455789999999999999999975444
No 36
>PF11268 DUF3071: Protein of unknown function (DUF3071); InterPro: IPR021421 Some members in this family of proteins are annotated as DNA-binding proteins however this cannot be confirmed. Currently no function is known.
Probab=32.49 E-value=63 Score=29.46 Aligned_cols=63 Identities=11% Similarity=0.152 Sum_probs=39.5
Q ss_pred CCcccccCCchhHHHHHHHhcCCCCCCCcccccccccHHHHHHHHHcCCCCHHHHHHHH---HHHHHHH
Q 041105 6 SKLNIPIFSSLPLIILAVYSSGSPATESREFSVKEATIEDLQLAFKQNQLTSRQLVEMY---IREIGRL 71 (403)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~l~~~l~~g~~t~~evv~~~---l~ri~~~ 71 (403)
.++-+||--.|--.+..-.+.-+...... +-..++..||++.|++| .|++||.+.+ ++||+++
T Consensus 24 e~f~l~idd~LRaair~~~~~~~~~~~~~--~~~~L~PReIQarIRaG-as~eeVA~~~G~~~~rV~rf 89 (170)
T PF11268_consen 24 ERFRLPIDDRLRAAIRGDRARLGQIEIEV--EPSSLRPREIQARIRAG-ASAEEVAEEAGVPVERVRRF 89 (170)
T ss_pred CEEEEecCHHHHHHHhccccccccccccc--CCCCCCHHHHHHHHHCC-CCHHHHHHHhCCCHHHhhhc
Confidence 34455555555554444332211111111 11278999999999999 4999999998 7777765
No 37
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=23.41 E-value=2.9e+02 Score=27.16 Aligned_cols=121 Identities=19% Similarity=0.201 Sum_probs=69.1
Q ss_pred eeCCCcccCCCCCCCCCCCcccCCCc--------CCHHHHHHHHHHHhCCCCCChhh-hhc---ccCCCCC--CcccccC
Q 041105 234 KPTVGLISRDGVIPVSPRLDTVGPIS--------KTVADTVYVLDAIVGFDAKDEAT-REA---SKYIPPG--GYKQFLK 299 (403)
Q Consensus 234 KPT~G~vs~~G~~~~s~~~d~~Gpma--------rsv~D~a~~~~~l~g~d~~d~~~-~~~---~~~~p~~--~~~~~~~ 299 (403)
.||.|.|...|---.....+.+|.+- -+|.|.-..+.-|.|.+..+-.. ... .-.+... +-.+.+.
T Consensus 53 e~~~G~I~~~g~~~~~~~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LS 132 (300)
T COG4152 53 EPTEGEITWNGGPLSQEIKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELS 132 (300)
T ss_pred CccCceEEEcCcchhhhhhhhcccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhh
Confidence 67778777766421112234455443 37899999999999977655211 100 0001100 0001111
Q ss_pred CC----------CCCCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhh
Q 041105 300 PH----------GLQGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSI 358 (403)
Q Consensus 300 ~~----------~~~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~ 358 (403)
.. -+...-+-+++++|. ..||--.+++++++..|++.|++|+ ++-..++.+.++|
T Consensus 133 KGnqQKIQfisaviHePeLlILDEPFS--GLDPVN~elLk~~I~~lk~~GatIi--fSsH~Me~vEeLC 197 (300)
T COG4152 133 KGNQQKIQFISAVIHEPELLILDEPFS--GLDPVNVELLKDAIFELKEEGATII--FSSHRMEHVEELC 197 (300)
T ss_pred hhhhHHHHHHHHHhcCCCEEEecCCcc--CCChhhHHHHHHHHHHHHhcCCEEE--EecchHHHHHHHh
Confidence 00 012345667777776 4799889999999999999999997 3434455555554
No 38
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=22.92 E-value=61 Score=27.84 Aligned_cols=18 Identities=33% Similarity=0.560 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHCCCEEE
Q 041105 326 EAFEHHVRTLRQQGAILL 343 (403)
Q Consensus 326 ~~~~~a~~~L~~~G~~vv 343 (403)
+.+++|++.|+++||+|-
T Consensus 110 ~dLekAv~~L~eaGhev~ 127 (128)
T COG3603 110 EDLEKAVKALEEAGHEVL 127 (128)
T ss_pred hhHHHHHHHHHHcCCccc
Confidence 568899999999999974
No 39
>PF10432 bact-PGI_C: Bacterial phospho-glucose isomerase C-terminal region; InterPro: IPR019490 Phosphoglucose isomerase (PGI) catalyses the interconversion of phosphoglucose and phosphofructose, and is a component of many sugar metabolic pathways. In some archaea and bacteria PGI activity occurs via a bifunctional enzyme that also exhibits phosphomannose isomerase (PMI) activity. Though not closely related to eukaryotic PGIs, the bifunctional enzyme is similar enough that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This entry represents the C-terminal half of the bifunctional PGI/PMI enzyme, which contains many of the active catalytic site residues. The enzyme is thought to use the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity; PDB: 1TZB_A 1X9H_A 1TZC_B 1X9I_A 1WIW_A.
Probab=20.73 E-value=4e+02 Score=23.51 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=44.4
Q ss_pred CCcEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEccCCCCHHHHHHhhhcccchhccHHHHHHHHHHHHhhcC
Q 041105 304 QGKRLGIVRNLGSNFTISSEVTEAFEHHVRTLRQQGAILLDNFEINNLEAILNSIANGETLAILAAEFKQALNAYLQELV 383 (403)
Q Consensus 304 ~~lrIGv~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~vv~~~~~p~~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~ 383 (403)
..+++=++++. ..++.+++.++.+.+.+++.|+.+++ +....-..+.+. .+.+. ..++..-.-+-+....
T Consensus 71 ~~~~~v~l~d~----~~~~~~~~r~~~~~e~~~~~~~~v~~-v~~~g~s~l~rl----~~li~-l~d~aS~YLA~~~GvD 140 (155)
T PF10432_consen 71 GRLRVVLLRDP----EDHPRVQRRVEITREIAEDRGVRVIE-VEAEGGSPLERL----ASLIY-LGDYASVYLALLYGVD 140 (155)
T ss_dssp TTEEEEEEC-T----CCHHHHHHHHHHHHHHHTTCSSEEEE-E--SCCCHHHHH----HHHHH-HHHHHHHHHHHHCT--
T ss_pred cceEEEEEEcC----CccccchhhhHHHHHHHHhcCCcEEE-EecCCCCHHHHH----HHHHH-HHHHHHHHHHHHhCcC
Confidence 44566666653 24678888999999999999999987 666532222222 11222 3344332222222233
Q ss_pred CCCCCCHHHHHH
Q 041105 384 TSPVRSLADVIA 395 (403)
Q Consensus 384 ~~~~~sl~~~i~ 395 (403)
..+++.++++.+
T Consensus 141 P~~v~~I~~lK~ 152 (155)
T PF10432_consen 141 PTPVPIIDELKE 152 (155)
T ss_dssp SS-TCCCHHHHH
T ss_pred CCcchHHHHHHh
Confidence 345888887765
No 40
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=20.54 E-value=98 Score=32.08 Aligned_cols=140 Identities=22% Similarity=0.250 Sum_probs=74.0
Q ss_pred CCCCCCCCCCccc-C----CCcCCHHHHHHHHHHHh--CCCCCChhhhhcccCCCCCCcccccC-CCCCCCcEEEEEcCC
Q 041105 243 DGVIPVSPRLDTV-G----PISKTVADTVYVLDAIV--GFDAKDEATREASKYIPPGGYKQFLK-PHGLQGKRLGIVRNL 314 (403)
Q Consensus 243 ~G~~~~s~~~d~~-G----pmarsv~D~a~~~~~l~--g~d~~d~~~~~~~~~~p~~~~~~~~~-~~~~~~lrIGv~~~~ 314 (403)
.|+-|-.++++.. | -+.=+-+|+..+++-+. +.+..|....-. |.-.+.+... ..-+++.++..-.+
T Consensus 248 ~GvTPEa~~~~~a~~~~~e~i~i~~~dl~~~~~~l~~~~~~~~D~V~lGc----PH~S~~El~~ia~ll~gr~~~~~~~- 322 (400)
T PF04412_consen 248 VGVTPEAPTLEAAFGGKAERITITDADLEEVYEELNTAGDEKVDLVALGC----PHLSLEELREIAELLEGRKVHPNVP- 322 (400)
T ss_pred eCCCCCCCcchhhhcCCceEEEeCHHHHHHHHHHhccCCCCCCCEEEECC----CCCCHHHHHHHHHHHhCCCCCCCce-
Confidence 3555555555433 2 35567789999999884 333333111111 1111111100 01233444221112
Q ss_pred CCCCCCCHHHHHHHHH--HHHHHHHCCCEEEEccCCCCHHHHHHhhhcccchhccHHHHHHHHHHHHhhcCCC--CCCCH
Q 041105 315 GSNFTISSEVTEAFEH--HVRTLRQQGAILLDNFEINNLEAILNSIANGETLAILAAEFKQALNAYLQELVTS--PVRSL 390 (403)
Q Consensus 315 ~~~~~~~~~v~~~~~~--a~~~L~~~G~~vv~~~~~p~~~~~~~~~~~~~~~~~~~~e~~~~l~~yl~~~~~~--~~~sl 390 (403)
+|.. .++.+.+..++ .+++|+++|++|+.+ .++-...+... ....++ .+ ..-...|+..+... .+.|+
T Consensus 323 ~~i~-t~~~v~~~a~~~G~~~~le~~G~~iv~d-TC~~v~p~~~~---~~~~v~--Tn-S~K~a~Y~~~~~g~~v~~~sl 394 (400)
T PF04412_consen 323 LWIT-TSRAVYELAERMGYVERLEKAGVQIVTD-TCMVVSPIIPK---GYKVVA--TN-SGKAAHYLPGLCGVKVRFGSL 394 (400)
T ss_pred EEEE-CCHHHHHHHHhCCHHHHHHHcCCEEEcc-ccceeccccCC---CCceEE--EC-cHHHHHhccccCCCceEecCH
Confidence 3332 68899999999 999999999999874 36544444222 112222 12 12356787776332 28999
Q ss_pred HHHHH
Q 041105 391 ADVIA 395 (403)
Q Consensus 391 ~~~i~ 395 (403)
+|.|+
T Consensus 395 ~~cV~ 399 (400)
T PF04412_consen 395 EDCVE 399 (400)
T ss_pred HHHhh
Confidence 99885
No 41
>PF14237 DUF4339: Domain of unknown function (DUF4339)
Probab=20.23 E-value=35 Score=23.56 Aligned_cols=24 Identities=17% Similarity=0.302 Sum_probs=19.2
Q ss_pred cccccHHHHHHHHHcCCCCHHHHH
Q 041105 38 VKEATIEDLQLAFKQNQLTSRQLV 61 (403)
Q Consensus 38 ~~~~si~~l~~~l~~g~~t~~evv 61 (403)
.-..|..+|.+++++|++++..+|
T Consensus 11 ~GP~s~~el~~l~~~g~i~~~tlv 34 (45)
T PF14237_consen 11 QGPFSLEELRQLISSGEIDPDTLV 34 (45)
T ss_pred ECCcCHHHHHHHHHcCCCCCCCeE
Confidence 445688999999999999876543
Done!