BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041106
         (83 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
          radiata GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 27/98 (27%)

Query: 1  MGIRVLGFIPAKQILPHSVLTTKNKEASTCADVPKGFLSVYVGENQKKRFLVP------- 53
          MG R+ G            L+ +N+ +S   D PKG+L+VYVGEN  KRF++P       
Sbjct: 1  MGFRLPGI--------RKTLSARNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQP 51

Query: 54 -----------EFGFNYPMGASTIPSGQDTFIEVISRL 80
                     EFG+++PMG  TIP  +D F  + S L
Sbjct: 52 LFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
          Length = 92

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 19/76 (25%)

Query: 24 NKEASTCADVPKGFLSVYVGENQKKRFLVP------------------EFGFNYPMGAST 65
          N+ +S   +VPKG+L VYVG+ + +RFL+P                  EFG+++PMG  T
Sbjct: 16 NQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLT 74

Query: 66 IPSGQDTFIEVISRLD 81
          IP  +D F+ V S L+
Sbjct: 75 IPCKEDEFLTVTSHLN 90


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 19/75 (25%)

Query: 25 KEASTCADVPKGFLSVYVGENQKKRFLVP------------------EFGFNYPMGASTI 66
          ++AS  AD PKG+L+VYVGE + KRF++P                  EFG+++PMG  TI
Sbjct: 9  RKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTI 67

Query: 67 PSGQDTFIEVISRLD 81
          P  +D F  + S L+
Sbjct: 68 PCSEDVFQCITSCLN 82


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 19/75 (25%)

Query: 25 KEASTCADVPKGFLSVYVGENQKKRFLVP------------------EFGFNYPMGASTI 66
          ++AS   D PKG+L+VYVGE + KRF++P                  EFG+++PMG  TI
Sbjct: 9  RKASNAVDAPKGYLAVYVGE-KMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTI 67

Query: 67 PSGQDTFIEVISRLD 81
          P  ++ F  +   L+
Sbjct: 68 PCSEEVFQRITCCLN 82


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
          Length = 93

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 26/99 (26%)

Query: 1  MGIRVLGFIPAKQILPHSVLTTKNKEASTCADVPKGFLSVYVGENQKKRFLVP------- 53
          MG R+ G +        S  TT+   AS   DVPKG+ +VYVG ++ +RF +P       
Sbjct: 1  MGFRIAGIVRRT-----SFYTTQ--AASKRVDVPKGYAAVYVG-DKMRRFTIPVSYLNEP 52

Query: 54 -----------EFGFNYPMGASTIPSGQDTFIEVISRLD 81
                     EFG+++PMG  TIP  ++ F+ V + L+
Sbjct: 53 SFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91


>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
          Length = 90

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 19/78 (24%)

Query: 22 TKNKEASTCADVPKGFLSVYVGENQKKRFLVP------------------EFGFNYPMGA 63
          + N+ +S   DV KG+L+VYVGE + +RF++P                  EFG+++P G 
Sbjct: 14 SANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGG 72

Query: 64 STIPSGQDTFIEVISRLD 81
           TIP  +D F  + S L+
Sbjct: 73 LTIPCSEDVFQHITSFLN 90


>sp|B4S5P3|GATB_PROA2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
           OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413)
           GN=gatB PE=3 SV=1
          Length = 481

 Score = 30.4 bits (67), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 18/85 (21%)

Query: 6   LGFIPAKQILPHSVLTTKNKEASTCADVPKGF--------------LSVYVGENQKKRFL 51
           LG      I PHSVL  KN       D+PKG+              LS+  GE Q+   L
Sbjct: 62  LGMSTGCSIAPHSVLARKN---YFYPDLPKGYQISQFEEPICLEGCLSIDAGEGQRDIRL 118

Query: 52  VPEFGFNYPMGASTIPSGQDTFIEV 76
           +         G S    G DTFI+ 
Sbjct: 119 I-RIHIEEDAGKSIHDIGDDTFIDA 142


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.138    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,427,303
Number of Sequences: 539616
Number of extensions: 1122826
Number of successful extensions: 2131
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2119
Number of HSP's gapped (non-prelim): 7
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)