BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041108
MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV
PLADCGVKDGSHIYLFFKPLDDGSTQHSVFTIPEWLNPNTLL

High Scoring Gene Products

Symbol, full name Information P value
AT2G32360 protein from Arabidopsis thaliana 1.0e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041108
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062551 - symbol:AT2G32360 "AT2G32360" species...   178  1.0e-13   1


>TAIR|locus:2062551 [details] [associations]
            symbol:AT2G32360 "AT2G32360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] EMBL:CP002685 GenomeReviews:CT485783_GR
            InterPro:IPR019955 PROSITE:PS50053 EMBL:AC005700 IPI:IPI00540315
            PIR:B84732 RefSeq:NP_180795.1 UniGene:At.66290
            ProteinModelPortal:Q9ZV64 SMR:Q9ZV64 EnsemblPlants:AT2G32360.1
            GeneID:817797 KEGG:ath:AT2G32360 TAIR:At2g32360 eggNOG:NOG247104
            HOGENOM:HOG000210054 OMA:EDSHIYL PhylomeDB:Q9ZV64
            ProtClustDB:CLSN2913013 ArrayExpress:Q9ZV64 Genevestigator:Q9ZV64
            Uniprot:Q9ZV64
        Length = 175

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 38/82 (46%), Positives = 52/82 (63%)

Query:     1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMT-QDHDE 59
             MKV+VEI+TGT     V  DATV  +K +I  + KLP  RLIL++  + +  +  +D D+
Sbjct:     1 MKVSVEIITGTFIDTDVSEDATVKQMKEKIAVEVKLPVTRLILVIGDEETRRLVMEDEDD 60

Query:    60 VPLADCGVKDGSHIYLFFKPLD 81
             + L D GV + SHIYLFFK  D
Sbjct:    61 MMLRDLGVGEDSHIYLFFKHPD 82


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102       102   0.00091  102 3  11 22  0.40    30
                                                     29  0.48    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  552 (59 KB)
  Total size of DFA:  121 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.34u 0.11s 10.45t   Elapsed:  00:00:00
  Total cpu time:  10.34u 0.11s 10.45t   Elapsed:  00:00:00
  Start:  Tue May 21 03:44:27 2013   End:  Tue May 21 03:44:27 2013

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