BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041108
(102 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572613|ref|XP_002527240.1| hypothetical protein RCOM_0231790 [Ricinus communis]
gi|223533416|gb|EEF35166.1| hypothetical protein RCOM_0231790 [Ricinus communis]
Length = 170
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 73/94 (77%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MKV VEILTGTLFYIQV NDAT+ADLKREIGAQQKLP DRLIL L + S + + D
Sbjct: 9 MKVVVEILTGTLFYIQVGNDATIADLKREIGAQQKLPHDRLILFLDNSRSSLIDEIGDAT 68
Query: 61 PLADCGVKDGSHIYLFFKPLDDGSTQHSVFTIPE 94
L DCGV DGSHIYLFF PLDDGST H VFT P+
Sbjct: 69 SLVDCGVHDGSHIYLFFNPLDDGSTHHFVFTWPD 102
>gi|224093198|ref|XP_002309829.1| predicted protein [Populus trichocarpa]
gi|222852732|gb|EEE90279.1| predicted protein [Populus trichocarpa]
Length = 102
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M+V VEILTGTLFYIQV NDATVADLK+EI AQQKLP DRLIL LS+ S + ++ D
Sbjct: 1 MRVVVEILTGTLFYIQVGNDATVADLKKEIEAQQKLPQDRLILFLSNKRSHLINEEGDGA 60
Query: 61 PLADCGVKDGSHIYLFFKPLD--DGSTQHSVFTIP 93
L DCGV+DGSHIYLFF P+D D ST H VFT P
Sbjct: 61 ALVDCGVQDGSHIYLFFDPVDNHDESTDHLVFTWP 95
>gi|224133024|ref|XP_002327941.1| predicted protein [Populus trichocarpa]
gi|222837350|gb|EEE75729.1| predicted protein [Populus trichocarpa]
Length = 89
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M+VAVEILTGTLFYIQV +DATVADLK+EI AQQKLP DRLIL L + + + ++ D
Sbjct: 1 MRVAVEILTGTLFYIQVGDDATVADLKKEIEAQQKLPQDRLILFLDNKQNHLINEEGDGA 60
Query: 61 PLADCGVKDGSHIYLFFKPLD-DGSTQHS 88
L DCGV+DGSHIYLFF PLD D S+ HS
Sbjct: 61 SLVDCGVQDGSHIYLFFDPLDTDESSSHS 89
>gi|297826675|ref|XP_002881220.1| hypothetical protein ARALYDRAFT_482164 [Arabidopsis lyrata subsp.
lyrata]
gi|297327059|gb|EFH57479.1| hypothetical protein ARALYDRAFT_482164 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMT-QDHDE 59
MKV+VEI+TGT V D TV +LK +I A+ KLP RLIL++ + + M +D D+
Sbjct: 1 MKVSVEIITGTFIDADVSEDTTVKELKEKIAAEVKLPVTRLILVIGDEETRRMVMEDEDD 60
Query: 60 VPLADCGVKDGSHIYLFFK 78
+ L D GV + SH+YLFFK
Sbjct: 61 MMLRDLGVGEDSHMYLFFK 79
>gi|15225233|ref|NP_180795.1| ubiquitin family protein [Arabidopsis thaliana]
gi|3831460|gb|AAC69942.1| hypothetical protein [Arabidopsis thaliana]
gi|330253579|gb|AEC08673.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 175
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMT-QDHDE 59
MKV+VEI+TGT V DATV +K +I + KLP RLIL++ + + + +D D+
Sbjct: 1 MKVSVEIITGTFIDTDVSEDATVKQMKEKIAVEVKLPVTRLILVIGDEETRRLVMEDEDD 60
Query: 60 VPLADCGVKDGSHIYLFFK 78
+ L D GV + SHIYLFFK
Sbjct: 61 MMLRDLGVGEDSHIYLFFK 79
>gi|297789840|ref|XP_002862847.1| hypothetical protein ARALYDRAFT_497275 [Arabidopsis lyrata subsp.
lyrata]
gi|297308595|gb|EFH39105.1| hypothetical protein ARALYDRAFT_497275 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMT-QDHDE 59
MKV+VEI+TGT V D TV +LK +I A+ K P RLIL++ + + M +D D+
Sbjct: 1 MKVSVEIITGTFIDADVSEDTTVKELKEKIAAEVKSPVTRLILVIGDEETRRMVMEDEDD 60
Query: 60 VPLADCGVKDGSHIYLFFK 78
+ L D GV + SH+YLFFK
Sbjct: 61 MMLRDLGVGEDSHMYLFFK 79
>gi|332376907|gb|AEE63593.1| unknown [Dendroctonus ponderosae]
Length = 335
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
+ V V TG FYI VE+++TV +LK+ + + K+P DR+ LL + H
Sbjct: 19 INVQVSPTTGGDFYISVESESTVENLKKLVSKRLKVPRDRICLLFRDKQ---LQDGH--- 72
Query: 61 PLADCGVKDGSHIYLF 76
L G+ DGS I L
Sbjct: 73 -LYQHGITDGSRITLL 87
>gi|66819587|ref|XP_643453.1| hypothetical protein DDB_G0275557 [Dictyostelium discoideum AX4]
gi|60471573|gb|EAL69529.1| hypothetical protein DDB_G0275557 [Dictyostelium discoideum AX4]
Length = 184
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MK+ + L G F ++V T D+KR+I P D+ LLLS+ +
Sbjct: 1 MKITIRSLLGHSFELEVNPSDTTEDIKRKIEKHTDTPFDQQRLLLSNKKRME-----EGS 55
Query: 61 PLADCGVKDGSHIYLFFK 78
+ D G+ DG H+ LF +
Sbjct: 56 TIEDSGIIDGDHLVLFIR 73
>gi|148232529|ref|NP_001079678.1| midnolin-A [Xenopus laevis]
gi|82176410|sp|Q7ZWN4.1|MIDNA_XENLA RecName: Full=Midnolin-A; AltName: Full=Midbrain nucleolar
protein A
gi|28461330|gb|AAH46865.1| MGC52651 protein [Xenopus laevis]
Length = 453
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + ++ TGT + + V D TV LKR I + K+P DRL LL H E
Sbjct: 20 MNLNIQSTTGTRYELSVPPDETVDGLKRRISQRLKVPKDRLTLL------------HRET 67
Query: 61 PLA-----DCGVKDGSHIYLF 76
L+ D G+ DGS + L
Sbjct: 68 RLSSGKLQDLGISDGSRLTLL 88
>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
Length = 920
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE T+ ++K +I ++ +P D+ L+ + ++C Q D
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKNNCERKQLEDGR 592
Query: 61 PLADCGVKDGSHIYLFFK 78
L+D ++ S ++L +
Sbjct: 593 TLSDYNIQKESTLHLVLR 610
>gi|340382024|ref|XP_003389521.1| PREDICTED: polyubiquitin-like, partial [Amphimedon queenslandica]
Length = 921
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILL-----LSSDHSCPMTQ 55
MKV+V++L+G + V T++D+K +I Q +PC+R ++ L D+ +
Sbjct: 548 MKVSVKLLSGEKMELNVNFSDTISDIKAKIEEIQGIPCNRQKIMFAKKRLEDDYVEKVLS 607
Query: 56 DHDEVPLADCGVKDGSHIYLFF 77
+ L D + DGS ++L F
Sbjct: 608 PNKIKTLIDHNITDGSTMHLIF 629
>gi|440804161|gb|ELR25039.1| polyubiqutin [Acanthamoeba castellanii str. Neff]
Length = 76
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M+V V LTG F I V TV +KR + + +P D+ +L+ C + D
Sbjct: 1 MEVFVRTLTGKAFVIMVRPGDTVESVKRVVETVEGIPWDQQVLV------CARCRLEDHR 54
Query: 61 PLADCGVKDGSHIYLFFKPLDD 82
LA GV+ + ++L +P D
Sbjct: 55 TLAQHGVQQHATLHLMLRPRGD 76
>gi|318101506|ref|NP_001188203.1| ubiquitin cross-reactive protein [Ictalurus punctatus]
gi|308324112|gb|ADO29191.1| ubiquitin cross-reactive protein [Ictalurus punctatus]
Length = 158
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ + +L G + V +ATV +LKREI + K +L L +++ + D D+
Sbjct: 2 MELIITLLNGQTHNVHVNPNATVGELKREIAPRFKARPSQLKLSITNGQILEL--DQDQK 59
Query: 61 PLADCGVKDGSHIYLFF 77
+ D G++ GS + L
Sbjct: 60 TVGDYGLRSGSKVMLLI 76
>gi|123478593|ref|XP_001322458.1| Ubiquitin family protein [Trichomonas vaginalis G3]
gi|121905305|gb|EAY10235.1| Ubiquitin family protein [Trichomonas vaginalis G3]
Length = 244
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 13 FYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLADCGVKDGSH 72
FY+ E TV ++K E+ Q ++P +++IL+ + D+V L+D GVKDGS
Sbjct: 14 FYVPFEAPLTVGEVKDEMFLQLEIPSNKMILIYNGQIL------KDKVLLSDLGVKDGSI 67
Query: 73 IYL 75
++L
Sbjct: 68 LFL 70
>gi|9635302|ref|NP_059200.1| ORF52 [Xestia c-nigrum granulovirus]
gi|6175696|gb|AAF05166.1|AF162221_52 ORF52 [Xestia c-nigrum granulovirus]
Length = 77
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + VE+ TVA LK++I ++ +P D+ L+ + Q DE
Sbjct: 1 MQIFVKTLTGKTITVDVESSDTVATLKQKIMDKESVPADQQRLIFAGK------QLDDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 TLADYNIQKESTLHLVLR 72
>gi|164519242|ref|YP_001649029.1| viral ubiquitin [Helicoverpa armigera granulovirus]
gi|163869428|gb|ABY47738.1| viral ubiquitin [Helicoverpa armigera granulovirus]
Length = 77
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + VE+ TVA LK++I ++ +P D+ L+ + Q DE
Sbjct: 1 MQIFVKTLTGKTITVDVESSDTVATLKQKIMDKESVPADQQRLIFAGK------QLDDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 TLADYNIQKESTLHLVLR 72
>gi|384250667|gb|EIE24146.1| hypothetical protein COCSUDRAFT_32988 [Coccomyxa subellipsoidea
C-169]
Length = 151
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 15 IQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLADCGVKDGSHIY 74
+QV +DATV+D+K I A+Q L D LL + Q D LA+ GV D +Y
Sbjct: 13 LQVGSDATVSDVKAAIEARQGLAVDAQRLLFAG------RQLEDSTVLAEVGVSDEDTLY 66
Query: 75 LFFKPLDDG 83
+ + L G
Sbjct: 67 ILARLLGGG 75
>gi|285002325|ref|YP_003422389.1| ubiquitin [Pseudaletia unipuncta granulovirus]
gi|197343585|gb|ACH69400.1| ubiquitin [Pseudaletia unipuncta granulovirus]
Length = 77
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + VE+ TVA LK++I ++ +P D+ L+ + Q DE
Sbjct: 1 MQIFVKTLTGKTITVDVESSDTVATLKKKIMDKESVPADQQRLIFAGK------QLDDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
L+D ++ S ++L +
Sbjct: 55 TLSDYNIQKESTLHLVLR 72
>gi|62751877|ref|NP_001015832.1| midnolin [Xenopus (Silurana) tropicalis]
gi|82178954|sp|Q5EB28.1|MIDN_XENTR RecName: Full=Midnolin; AltName: Full=Midbrain nucleolar protein
gi|59808830|gb|AAH90118.1| midnolin [Xenopus (Silurana) tropicalis]
gi|89268751|emb|CAJ82671.1| midnolin [Xenopus (Silurana) tropicalis]
gi|197246668|gb|AAI68460.1| midn protein [Xenopus (Silurana) tropicalis]
gi|213624278|gb|AAI70880.1| midnolin [Xenopus (Silurana) tropicalis]
gi|213625568|gb|AAI70878.1| midnolin [Xenopus (Silurana) tropicalis]
Length = 453
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + ++ TGT + + V D TV LKR I + K+P +RL LL H E
Sbjct: 20 MNLNIQSTTGTRYELSVPPDETVDGLKRRISQRLKVPKERLTLL------------HRET 67
Query: 61 PLA-----DCGVKDGSHIYLF 76
L+ D G+ DGS + L
Sbjct: 68 RLSSGKLQDLGISDGSRLTLL 88
>gi|242247242|ref|NP_001156073.1| ubiquitin-like protein 4A-like [Acyrthosiphon pisum]
gi|239791366|dbj|BAH72158.1| ACYPI001055 [Acyrthosiphon pisum]
Length = 139
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MK+ ++IL G V+++ T+A+LK + K+P LLL+ C DE
Sbjct: 1 MKINIKILNGQECSFDVQSEMTIAELKNHVFEALKVPVKDQRLLLTGRPLC------DEK 54
Query: 61 PLADC-GVKDGSHIYLFFKP 79
L D +KDG+ + L KP
Sbjct: 55 TLVDYPQIKDGTRLNLIVKP 74
>gi|357134045|ref|XP_003568630.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
distachyon]
Length = 139
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ T+ ++K +I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNIKAKIQDREGIPPDQQRLIFAGK------QLEDGR 54
Query: 61 PLADCGVKDGSHIYLFFKPLDDGSTQHSVFTIPEWLN 97
LAD ++ S ++L + L GS H + P L
Sbjct: 55 TLADYNIQKESTLHLVLR-LRGGSRGHYIIKEPSLLQ 90
>gi|242044456|ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [Sorghum bicolor]
gi|241923476|gb|EER96620.1| hypothetical protein SORBIDRAFT_02g022750 [Sorghum bicolor]
Length = 139
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ TVA++K +I ++ +P D+ L+ + Q DE
Sbjct: 1 MQIFVKTLTGKTVTLEVESSDTVANVKAKIQDKEGIPPDQQRLIFAG------KQLEDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 TLADYNIQKESTLHLVLR 72
>gi|357491727|ref|XP_003616151.1| Ubiquitin [Medicago truncatula]
gi|355517486|gb|AES99109.1| Ubiquitin [Medicago truncatula]
Length = 405
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSS 47
M++ ++ LTG ++VE+ T+A+LK +I ++++P D+ L+ +S
Sbjct: 266 MQIFIKTLTGKTIPLKVESSYTIANLKAKIREKERIPVDQQCLIFAS 312
>gi|123976444|ref|XP_001330843.1| Ubiquitin family protein [Trichomonas vaginalis G3]
gi|121896952|gb|EAY02088.1| Ubiquitin family protein [Trichomonas vaginalis G3]
Length = 245
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 5 VEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLAD 64
V +L F+I E TVA++K E+ Q P ++L+ ++ + DH + L+D
Sbjct: 6 VRMLPNHDFFIPFEEPLTVAEVKDEMFNQLSAPTKNMVLI----YNGQILSDH--ISLSD 59
Query: 65 CGVKDGSHIYLFFKPLD 81
G+ S ++LF K D
Sbjct: 60 LGITHASVLFLFVKNFD 76
>gi|209171025|ref|YP_002268172.1| agip142 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436616|gb|ACI28843.1| ubiquitin [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 82
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ TV LK++I ++ +P D+ L+ S Q D
Sbjct: 1 MQIFVKTLTGKTLTVEVESTDTVEQLKQKITDKEGIPPDQQRLIYSGK------QLEDSR 54
Query: 61 PLADCGVKDGSHIYLFFK 78
++D ++ S+I+L +
Sbjct: 55 TMSDYNIQKESNIHLVLR 72
>gi|332489|gb|AAA46751.1| ubiquitin-like protein [Autographa californica
nucleopolyhedrovirus]
Length = 77
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ ++ LTG + E + TVADLK++I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFIKTLTGKTITAETEPEETVADLKQKIADKEGVPVDQQRLIFAGK------QLEDSK 54
Query: 61 PLADCGVKDGSHIYLFFK 78
+AD ++ S +++ +
Sbjct: 55 TMADYNIQKESTLHMVLR 72
>gi|428184850|gb|EKX53704.1| hypothetical protein GUITHDRAFT_100678 [Guillardia theta CCMP2712]
Length = 993
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 11 TLFYIQVENDATVADLKREIGAQQKLPCDRLILLLS----SDHSCPMTQDHDEVPLADCG 66
T +QVE DATV +LKR + A+ + P R+ L+ +D +C + +DC
Sbjct: 103 TRLRVQVEADATVEELKRHVEARLQTPSTRVRLIYQGRELTDPTCRL--------YSDCS 154
Query: 67 VKDGSHIYLFFK 78
++ S ++L K
Sbjct: 155 IRTNSTLHLSVK 166
>gi|328768323|gb|EGF78370.1| hypothetical protein BATDEDRAFT_13383 [Batrachochytrium
dendrobatidis JAM81]
Length = 84
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 3 VAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPL 62
+ V LTG + + V + T+ D+K ++ Q +P + L+ H DE L
Sbjct: 5 IHVGTLTGQVISLNVFSHFTIGDIKYQLFEQIGIPVEHQQLVFCEHHFVK-----DEATL 59
Query: 63 ADCGVKDGSHIYL 75
+CG+++GS ++L
Sbjct: 60 DECGIQNGSTLHL 72
>gi|298713601|emb|CBJ27129.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 453
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
+ +++ LTG I+ TV D+K+++ Q +PC++ ++ + Q D+
Sbjct: 158 ISFSIKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQ------QTSDDR 211
Query: 61 PLADCGVKDGSHIYL 75
L DC +++GS +L
Sbjct: 212 TLRDCNIRNGSVAHL 226
>gi|146161955|ref|XP_001008308.2| UBA/TS-N domain containing protein [Tetrahymena thermophila]
gi|146146601|gb|EAR88063.2| UBA/TS-N domain containing protein [Tetrahymena thermophila
SB210]
Length = 373
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFY-IQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDE 59
MK+ ++ L GT F+ + +E ATVA+LK +I +++ D + L+ +T+D
Sbjct: 1 MKINIKTLKGTDFFDVNLEETATVAELKEKIATEKQKEKDTIKLVHKGKQ---LTEDSKT 57
Query: 60 VPLADCGVKDGSHIYLFF 77
L + G+KD + L F
Sbjct: 58 --LGELGIKDNDFVILMF 73
>gi|47208130|emb|CAF92414.1| unnamed protein product [Tetraodon nigroviridis]
Length = 189
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + + TGT F + + + TV LK+ + + K+P +RL LL H E
Sbjct: 113 MNLYIHSTTGTRFELSLPQEETVEGLKKRLSQKLKVPKERLALL------------HKET 160
Query: 61 PLA-----DCGVKDGSHIYLF 76
L+ D G+ DGS + L
Sbjct: 161 RLSSGKLQDLGISDGSKLTLV 181
>gi|438000340|ref|YP_007250445.1| v-ubi protein [Thysanoplusia orichalcea NPV]
gi|429842877|gb|AGA16189.1| v-ubi protein [Thysanoplusia orichalcea NPV]
Length = 80
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + E TVADLK++I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFVKTLTGKTITAETEPSETVADLKQKIADKEGVPVDQQRLIFAGK------QLEDSK 54
Query: 61 PLADCGVKDGSHIYLFFK 78
+AD ++ S +++ +
Sbjct: 55 TMADYNIQKESTLHMVLR 72
>gi|307111770|gb|EFN60004.1| hypothetical protein CHLNCDRAFT_48072 [Chlorella variabilis]
Length = 152
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 15 IQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLADCGVKDGSHIY 74
+++ + ATVAD+K I A+Q +P ++ + Q +E L CGV D S +Y
Sbjct: 12 LELGSTATVADVKAAIEARQGIPAAEQRVMFAG------RQLEEEASLGACGVTDDSQMY 65
Query: 75 LFFKPL 80
+ + L
Sbjct: 66 VLMRLL 71
>gi|170035460|ref|XP_001845587.1| anopheles stephensi ubiquitin [Culex quinquefasciatus]
gi|167877499|gb|EDS40882.1| anopheles stephensi ubiquitin [Culex quinquefasciatus]
Length = 134
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MK+ ++IL G + ++ ++T+ D+K+++ + +P + LLL DE
Sbjct: 1 MKLTIKILKGDEYVVEATEESTIQDIKQDLERKSSIPAEHQKLLLVGKTLS------DEK 54
Query: 61 PLADCG-VKDGSHIYLFFKPLD 81
LA G ++DG+ + L K D
Sbjct: 55 TLASYGNIRDGTKLTLVVKKPD 76
>gi|91092362|ref|XP_971770.1| PREDICTED: similar to CG32676 CG32676-PA [Tribolium castaneum]
gi|270015714|gb|EFA12162.1| hypothetical protein TcasGA2_TC002312 [Tribolium castaneum]
Length = 311
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
+ + V TG FY+ VE D +V + K+ + + K+P DR+ LL QD
Sbjct: 22 ISIHVSPTTGGDFYLTVEPDISVDNFKKLVSKRLKVPRDRICLLFRDKQ----LQDGS-- 75
Query: 61 PLADCGVKDGSHIYLF 76
L G+ DGS + L
Sbjct: 76 -LLQHGISDGSRVTLL 90
>gi|11068045|ref|NP_068261.1| PxORF42 peptide [Plutella xylostella granulovirus]
gi|11036837|gb|AAG27340.1|AF270937_42 PxORF42 peptide [Plutella xylostella granulovirus]
Length = 114
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + VE+ ++ADLK++I ++ +P D+ L+ + Q D+
Sbjct: 22 MQIFVKTLTGKTITVDVESTDSIADLKQKIADKESVPVDQQRLIFAG------KQLDDDR 75
Query: 61 PLADCGVKDGSHIYLFFK 78
L+D ++ S ++L +
Sbjct: 76 QLSDYNIQKESTLHLVLR 93
>gi|255080554|ref|XP_002503857.1| predicted protein [Micromonas sp. RCC299]
gi|226519124|gb|ACO65115.1| predicted protein [Micromonas sp. RCC299]
Length = 374
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MKVA + LT F +DA++ D++ ++ QK+P ++L+ H + D+
Sbjct: 1 MKVAFKTLTNQKFEEDFADDASIGDVRAKLSETQKIPAPEMVLI----HKGKVLT--DDA 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LA GV + S I + +
Sbjct: 55 TLAAAGVTEASFIVMMHQ 72
>gi|403221727|dbj|BAM39859.1| ubiquitin [Theileria orientalis strain Shintoku]
Length = 171
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
+ + VE + G +QV + TV D+K+++ +Q +P D+ L+ + + + +E
Sbjct: 96 LNLTVETMQGKSIQVQVSQNETVLDVKKKLEEEQTIPVDQQRLI----YKGKLLE--NEK 149
Query: 61 PLADCGVKDGSHIYLFFK 78
+AD G+KD + L +
Sbjct: 150 TIADYGIKDNEVLQLVLR 167
>gi|297853176|ref|XP_002894469.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340311|gb|EFH70728.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 160
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + ++ LTG ++VEN T+ ++K +I ++ +P R L+ S Q D +
Sbjct: 87 MLIFIKTLTGRRIVLEVENRDTIENVKAKIQDKEGIPVGRQRLMFKS------KQLEDGL 140
Query: 61 PLADCGVKDGSHIYLFFKP 79
+AD +++ S ++L P
Sbjct: 141 TVADYNIQNDSILHLILLP 159
>gi|76779660|gb|AAI06622.1| MGC52897 protein [Xenopus laevis]
Length = 450
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + ++ TGT + + V + TV LKR I + K+P +RL LL H E
Sbjct: 20 MNLNIQSTTGTRYELSVPLNETVDGLKRRISQRLKVPKERLTLL------------HRET 67
Query: 61 PLA-----DCGVKDGSHIYLF 76
L+ D G+ DGS + L
Sbjct: 68 RLSSGKLQDLGISDGSRLTLL 88
>gi|148237612|ref|NP_001079641.1| midnolin-B [Xenopus laevis]
gi|82176471|sp|Q7ZWX9.1|MIDNB_XENLA RecName: Full=Midnolin-B; AltName: Full=Midbrain nucleolar
protein B
gi|28436855|gb|AAH46658.1| MGC52897 protein [Xenopus laevis]
Length = 451
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + ++ TGT + + V + TV LKR I + K+P +RL LL H E
Sbjct: 20 MNLNIQSTTGTRYELSVPLNETVDGLKRRISQRLKVPKERLTLL------------HRET 67
Query: 61 PLA-----DCGVKDGSHIYLF 76
L+ D G+ DGS + L
Sbjct: 68 RLSSGKLQDLGISDGSRLTLL 88
>gi|326429391|gb|EGD74961.1| hypothetical protein PTSG_12544 [Salpingoeca sp. ATCC 50818]
Length = 776
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 2 KVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVP 61
+V++ ++T F I+V TVADLK I + + LL D
Sbjct: 16 RVSIRMITEETFSIEVSRQGTVADLKEAISRARGMSPATQRLLFQGRSLV------DSQT 69
Query: 62 LADCGVKDGSHIYLFFK--PLDD 82
LAD GV DGS ++L + P DD
Sbjct: 70 LADAGVSDGSTVHLVQRAPPSDD 92
>gi|297809723|ref|XP_002872745.1| hypothetical protein ARALYDRAFT_490172 [Arabidopsis lyrata subsp.
lyrata]
gi|297318582|gb|EFH49004.1| hypothetical protein ARALYDRAFT_490172 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLL 45
MK VEIL+G+LF I+++ T+ +K++I Q++P + L++
Sbjct: 1 MKFLVEILSGSLFEIELDRKDTLLVVKQKIEKSQRIPVSKQTLIV 45
>gi|108707277|gb|ABF95072.1| Ubiquitin, putative, expressed [Oryza sativa Japonica Group]
Length = 100
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VEN VA++K +I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGK------QLEDGR 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 TLADYNIQKESTLHLVLR 72
>gi|46309407|ref|YP_006297.1| ORF47 [Agrotis segetum granulovirus]
gi|46200624|gb|AAS82691.1| ORF47 [Agrotis segetum granulovirus]
Length = 97
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++ E+ T+A +K++I ++ +P D+ L+ Q DE
Sbjct: 1 MQIFVKTLTGKTITVETESTDTIASIKQKIMDKESVPVDQQRLIYGGK------QLEDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 QLADYNIQKESTLHLVLR 72
>gi|348551512|ref|XP_003461574.1| PREDICTED: ubiquitin-like protein ISG15-like [Cavia porcellus]
Length = 157
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 KVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVP 61
++ V++L G F + V N T+ +LKR+I + K+P + L + S + + D +
Sbjct: 4 ELTVKMLDGQQFLVLVNNSMTLPELKRQIAKKTKVPAFQQCLAIQSTNR----ELQDRLS 59
Query: 62 LADCGVKDGSHIYLFFKPLDD 82
L G GS + L K D
Sbjct: 60 LTQQGFGPGSVVLLLVKDCKD 80
>gi|297600684|ref|NP_001049613.2| Os03g0259500 [Oryza sativa Japonica Group]
gi|108707276|gb|ABF95071.1| Ubiquitin, putative, expressed [Oryza sativa Japonica Group]
gi|125543179|gb|EAY89318.1| hypothetical protein OsI_10821 [Oryza sativa Indica Group]
gi|125585661|gb|EAZ26325.1| hypothetical protein OsJ_10205 [Oryza sativa Japonica Group]
gi|255674384|dbj|BAF11527.2| Os03g0259500 [Oryza sativa Japonica Group]
Length = 136
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VEN VA++K +I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGK------QLEDGR 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 TLADYNIQKESTLHLVLR 72
>gi|410921298|ref|XP_003974120.1| PREDICTED: uncharacterized protein LOC101067279 [Takifugu rubripes]
Length = 570
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + + TGT F + + + TV LKR + + K+P +RL LL H E
Sbjct: 55 MNLYIHSTTGTRFELSLPQEETVEGLKRRLSQKLKVPKERLALL------------HKET 102
Query: 61 PLA-----DCGVKDGSHIYL 75
L+ D G+ DGS + L
Sbjct: 103 RLSSGKLQDLGISDGSKLTL 122
>gi|340374063|ref|XP_003385558.1| PREDICTED: polyubiquitin-C-like, partial [Amphimedon queenslandica]
Length = 675
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPC--DRLIL---LLSSDHSCPMTQ 55
M + + L+G + V TV+D+KR+I + +PC ++I LL D+
Sbjct: 176 MTIFAKTLSGKTIKLNVNFSDTVSDIKRKIEEMEGIPCHEQKIIFGQRLLGEDYIEEALS 235
Query: 56 DHDEVPLADCGVKDGSHIYLFFKPLDDG 83
L D VKDGS ++L F G
Sbjct: 236 PGKIKTLLDHNVKDGSILHLIFPSRASG 263
>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ T+ ++K++I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGK------QLEDGR 54
Query: 61 PLADCGVKDGSHIYLFF 77
LAD ++ S ++L F
Sbjct: 55 TLADYNIQKESTLHLIF 71
>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ T+ ++K++I ++ +P D+ L+ + Q D
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGK------QLEDGR 130
Query: 61 PLADCGVKDGSHIYLFF 77
LAD ++ S ++L F
Sbjct: 131 TLADYNIQKESTLHLIF 147
>gi|156539959|ref|XP_001599129.1| PREDICTED: ubiquilin-1-like [Nasonia vitripennis]
Length = 532
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 15 IQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLADCGVKDGSHIY 74
+++E DAT+ D K + + D+L L+ + + +DH++ L + VKDG ++
Sbjct: 24 VEIEEDATIKDFKDAVAKKFNAQPDQLCLIFAGK----IMKDHEK--LTNHNVKDGLTVH 77
Query: 75 LFFKPLDDGSTQHSVFTIPE 94
L K ++Q++ T P+
Sbjct: 78 LVIKAPRTAASQNNQDTTPQ 97
>gi|109067209|ref|XP_001096612.1| PREDICTED: hypothetical protein LOC708161 [Macaca mulatta]
Length = 204
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE T ++K +I A++ +P D+ L+ + Q D
Sbjct: 78 MQIFVKTLTGKTITLEVEPSDTTENVKAKIQAKEGIPLDQQRLIFAGK------QLEDGR 131
Query: 61 PLADCGVKDGSHIYL 75
L+DC ++ S ++L
Sbjct: 132 TLSDCNIQKESILHL 146
>gi|46309473|ref|NP_996935.1| midnolin [Danio rerio]
gi|82185992|sp|Q6NYU6.1|MIDN_DANRE RecName: Full=Midnolin; AltName: Full=Midbrain nucleolar protein
gi|42542512|gb|AAH66456.1| Midnolin [Danio rerio]
Length = 509
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + + TGT F + + + TV LKR + + K+P +RL LL H E
Sbjct: 28 MNLYIHSTTGTRFELSLPAEETVEGLKRRLSQRLKVPKERLALL------------HKET 75
Query: 61 PLA-----DCGVKDGSHIYL 75
L+ D G+ DGS + L
Sbjct: 76 RLSSGKLQDLGITDGSKLTL 95
>gi|9627777|ref|NP_054064.1| viral ubiquitin [Autographa californica nucleopolyhedrovirus]
gi|9630844|ref|NP_047441.1| Ubiquitin [Bombyx mori NPV]
gi|23577935|ref|NP_703025.1| viral ubiquitin [Rachiplusia ou MNPV]
gi|114680089|ref|YP_758502.1| ubiquitin [Plutella xylostella multiple nucleopolyhedrovirus]
gi|237643576|ref|YP_002884266.1| ubiquitin [Bombyx mandarina nucleopolyhedrovirus]
gi|1174858|sp|P16709.2|UBIL_NPVAC RecName: Full=Ubiquitin-like protein; Flags: Precursor
gi|7460821|pir||T41781 ubiquitin orf35 - Bombyx mori nuclear polyhedrosis virus
(isolate T3)
gi|332388|gb|AAA46685.1| V-ubi (ORF 3) [Autographa californica nucleopolyhedrovirus]
gi|559104|gb|AAA66665.1| viral ubiquitin [Autographa californica nucleopolyhedrovirus]
gi|3745863|gb|AAC63710.1| Ubiquitin [Bombyx mori NPV]
gi|4996598|dbj|BAA78550.1| virus ubiquitin-like protein [Bombyx mori NPV]
gi|23476580|gb|AAN28127.1| viral ubiquitin [Rachiplusia ou MNPV]
gi|29650470|gb|AAO88257.1| ubiquitin [Bombyx mori NPV]
gi|91982153|gb|ABE68421.1| ubiquitin [Plutella xylostella multiple nucleopolyhedrovirus]
gi|229358122|gb|ACQ57217.1| ubiquitin [Bombyx mandarina nucleopolyhedrovirus]
gi|393659965|gb|AFN08954.1| ubiquitin [Bombyx mori NPV]
gi|393717078|gb|AFN21000.1| ubiquitin [Bombyx mori NPV]
gi|393717219|gb|AFN21140.1| ubiquitin [Bombyx mori NPV]
gi|393717359|gb|AFN21279.1| ubiquitin [Bombyx mori NPV]
gi|397133463|gb|AFO09997.1| ubiquitin [Bombyx mandarina nucleopolyhedrovirus S2]
Length = 77
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ ++ LTG + E TVADLK++I ++ +P D+ L+ + Q D
Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK------QLEDSK 54
Query: 61 PLADCGVKDGSHIYLFFK 78
+AD ++ S +++ +
Sbjct: 55 TMADYNIQKESTLHMVLR 72
>gi|123976023|ref|XP_001314425.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896738|gb|EAY01881.1| hypothetical protein TVAG_090160 [Trichomonas vaginalis G3]
Length = 244
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 5 VEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEVPLAD 64
V+ T FY+ E T +K E+ Q ++P ++ L+ + + DH L +
Sbjct: 6 VKFYTNLEFYVPFEEPMTAGKVKEEMFLQLEIPTKQMTLVFNGQ----ILPDHAN--LQE 59
Query: 65 CGVKDGSHIYLFFKPLDD 82
G K+GS +YL+ D+
Sbjct: 60 MGAKNGSVVYLYVPNYDN 77
>gi|403334676|gb|EJY66504.1| hypothetical protein OXYTRI_13210 [Oxytricha trifallax]
Length = 185
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILL 44
M++ V+ LTG QVE VADLK++I ++ + L+L+
Sbjct: 1 MQIFVKTLTGVTLTFQVEESCLVADLKQQIAEKEGFETEELVLI 44
>gi|395831299|ref|XP_003788740.1| PREDICTED: midnolin [Otolemur garnettii]
Length = 464
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILL-----LSSDHSCPMTQ 55
M +A+ TGT + + V D TV L+R + + K+P +RL LL LSS
Sbjct: 31 MSLAIHSTTGTRYDLSVPPDETVEGLRRRLSQRLKVPKERLALLHKDTRLSSGK------ 84
Query: 56 DHDEVPLADCGVKDGSHIYL 75
L + GV DGS + L
Sbjct: 85 ------LQELGVGDGSKLTL 98
>gi|397616601|gb|EJK64048.1| hypothetical protein THAOC_15257, partial [Thalassiosira oceanica]
Length = 427
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M+V V+ LTG + TVA K +I A++ +P D+ L+ + + D +
Sbjct: 220 MQVYVKTLTGKTLTLACCPGDTVAVAKCKIHAEEGIPMDQQRLIFNG------RRLEDGL 273
Query: 61 PLADCGVKDGSHIYLFFK 78
L+DC +++GS ++L +
Sbjct: 274 TLSDCNIRNGSTLHLVLR 291
>gi|157103483|ref|XP_001648001.1| anopheles stephensi ubiquitin, putative [Aedes aegypti]
gi|108880532|gb|EAT44757.1| AAEL003921-PA [Aedes aegypti]
Length = 133
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
MK+ ++IL G + ++ ++T+ D+K+++ + +P + LLL DE
Sbjct: 1 MKLTIKILKGDEYVVEATEESTIMDIKQDLERKSMIPVEHQKLLLVGKTLS------DEK 54
Query: 61 PLADCG-VKDGSHIYLFFKPLD 81
+A G +KDG+ + L K D
Sbjct: 55 TVASYGNIKDGTKLTLVVKKPD 76
>gi|224003975|ref|XP_002291659.1| Rad23 like protein [Thalassiosira pseudonana CCMP1335]
gi|220973435|gb|EED91766.1| Rad23 like protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + V+ L G F ++VE + TVA++K I + LP + L+ HS + +D D++
Sbjct: 1 MNLTVKTLKGGKFTVEVEAEKTVAEVKVAIQTNKDLPASSMKLI----HSGKVLKDEDKI 56
Query: 61 PLADCGVK 68
C +K
Sbjct: 57 --ESCNIK 62
>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Contains: RecName:
Full=Ubiquitin-related 5; Contains: RecName:
Full=Ubiquitin-related 6; Contains: RecName:
Full=Ubiquitin-related 7; Contains: RecName:
Full=Ubiquitin-related 8; Flags: Precursor
gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
Length = 631
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ ++ LTG ++VE+ T+A++K +I ++ + D+ +L+ Q D V
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQ------QLEDGV 605
Query: 61 PLADCGVKDGSHIYLFFK 78
L D + S +YL +
Sbjct: 606 TLGDYDIHKKSTLYLVLR 623
>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
Length = 381
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG ++VE+ T ++K +I ++ +P D+ L+ + Q D
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAG------KQLEDGR 130
Query: 61 PLADCGVKDGSHIYLFFK 78
LADC ++ S ++L +
Sbjct: 131 TLADCNIQKESTLHLVLR 148
>gi|74181922|dbj|BAE32660.1| unnamed protein product [Mus musculus]
Length = 507
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILL-----LSSDHSCPMTQ 55
M +A+ TGT + + V +D TV L++ + + K+P +RL LL LSS
Sbjct: 32 MSLAIHSTTGTRYDLSVPHDETVEGLRKRLSQRLKVPKERLALLHKDTRLSSGK------ 85
Query: 56 DHDEVPLADCGVKDGSHIYL 75
L + GV DGS + L
Sbjct: 86 ------LQEFGVGDGSKLTL 99
>gi|288804684|ref|YP_003429369.1| ubquitin [Pieris rapae granulovirus]
gi|270161259|gb|ACZ63531.1| ubquitin [Pieris rapae granulovirus]
gi|309752953|gb|ADO85471.1| v-ubi [Pieris rapae granulovirus]
Length = 95
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M++ V+ LTG + VE+ TVA +K++I ++ +P D+ L+ Q DE
Sbjct: 1 MQIFVKTLTGKTITLDVESADTVATIKQKICDKEGVPSDQQRLIFGG------KQLDDER 54
Query: 61 PLADCGVKDGSHIYLFFK 78
LAD ++ S ++L +
Sbjct: 55 VLADYNIQKESTLHLVLR 72
>gi|10947008|ref|NP_067540.1| midnolin [Mus musculus]
gi|9229934|dbj|BAB00638.1| midnolin [Mus musculus musculus]
gi|21961244|gb|AAH34719.1| Midnolin [Mus musculus]
gi|148699642|gb|EDL31589.1| midnolin, isoform CRA_b [Mus musculus]
Length = 508
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILL-----LSSDHSCPMTQ 55
M +A+ TGT + + V +D TV L++ + + K+P +RL LL LSS
Sbjct: 32 MSLAIHSTTGTRYDLSVPHDETVEGLRKRLSQRLKVPKERLALLHKDTRLSSGK------ 85
Query: 56 DHDEVPLADCGVKDGSHIYL 75
L + GV DGS + L
Sbjct: 86 ------LQEFGVGDGSKLTL 99
>gi|348504345|ref|XP_003439722.1| PREDICTED: hypothetical protein LOC100691436 [Oreochromis
niloticus]
Length = 540
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 1 MKVAVEILTGTLFYIQVENDATVADLKREIGAQQKLPCDRLILLLSSDHSCPMTQDHDEV 60
M + + TGT F + + + TV LKR + + K+P +RL LL H E
Sbjct: 27 MNLYIHSTTGTRFELSLPLEETVEGLKRRLSQRLKVPKERLALL------------HKET 74
Query: 61 PLA-----DCGVKDGSHIYL 75
L+ D G+ DGS + L
Sbjct: 75 RLSSGKLQDLGISDGSKLTL 94
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,611,417,252
Number of Sequences: 23463169
Number of extensions: 58767266
Number of successful extensions: 171508
Number of sequences better than 100.0: 123
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 171451
Number of HSP's gapped (non-prelim): 147
length of query: 102
length of database: 8,064,228,071
effective HSP length: 71
effective length of query: 31
effective length of database: 6,398,343,072
effective search space: 198348635232
effective search space used: 198348635232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)