Query 041111
Match_columns 311
No_of_seqs 161 out of 1849
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:53:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041111.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041111hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-54 2.2E-59 422.3 27.3 308 1-309 150-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 8.3E-52 1.8E-56 402.8 25.7 304 1-305 162-520 (521)
3 PLN02932 3-ketoacyl-CoA syntha 100.0 2.4E-51 5.1E-56 397.4 24.6 301 1-303 122-476 (478)
4 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 5.4E-52 1.2E-56 383.5 17.7 269 2-280 8-323 (323)
5 PLN02377 3-ketoacyl-CoA syntha 100.0 3.7E-50 8E-55 391.1 25.7 301 1-303 146-500 (502)
6 PLN00415 3-ketoacyl-CoA syntha 100.0 5.2E-47 1.1E-51 363.4 22.7 302 1-303 108-465 (466)
7 PLN03168 chalcone synthase; Pr 100.0 4.8E-43 1E-47 335.4 23.0 267 14-282 87-388 (389)
8 PLN03172 chalcone synthase fam 100.0 8.1E-43 1.7E-47 333.9 22.4 266 14-280 88-387 (393)
9 PRK05963 3-oxoacyl-(acyl carri 100.0 4.7E-43 1E-47 328.7 18.2 268 2-279 8-326 (326)
10 PLN03169 chalcone synthase fam 100.0 1.6E-42 3.5E-47 332.3 21.9 266 14-280 92-389 (391)
11 cd00831 CHS_like Chalcone and 100.0 1.5E-42 3.3E-47 329.7 20.2 261 15-277 72-361 (361)
12 PLN03173 chalcone synthase; Pr 100.0 6.4E-42 1.4E-46 327.5 21.9 266 15-281 89-388 (391)
13 PLN03170 chalcone synthase; Pr 100.0 6.2E-42 1.3E-46 328.7 21.5 265 14-279 92-390 (401)
14 PLN02326 3-oxoacyl-[acyl-carri 100.0 2.8E-42 6.1E-47 329.9 18.4 269 2-279 52-379 (379)
15 PRK07204 3-oxoacyl-(acyl carri 100.0 7.4E-42 1.6E-46 321.0 19.6 269 2-279 9-329 (329)
16 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 6.2E-42 1.3E-46 321.3 18.6 268 2-280 7-326 (326)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 4.6E-42 1E-46 325.2 17.8 271 2-287 12-347 (353)
18 PLN03171 chalcone synthase-lik 100.0 5.2E-41 1.1E-45 322.5 23.0 267 13-282 93-397 (399)
19 PRK12879 3-oxoacyl-(acyl carri 100.0 1.7E-41 3.7E-46 317.7 18.8 270 2-280 9-325 (325)
20 PRK09258 3-oxoacyl-(acyl carri 100.0 6.6E-41 1.4E-45 315.5 20.1 272 2-279 10-338 (338)
21 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.7E-40 3.6E-45 310.2 17.3 269 2-279 7-318 (318)
22 PRK06840 hypothetical protein; 100.0 8.2E-40 1.8E-44 308.4 18.2 272 2-281 9-337 (339)
23 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.8E-40 6E-45 312.4 15.0 270 2-284 6-312 (345)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 1.4E-39 2.9E-44 303.8 18.8 267 2-277 6-320 (320)
25 PRK04262 hypothetical protein; 100.0 1.3E-39 2.9E-44 308.1 16.1 269 2-286 7-315 (347)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 2.4E-39 5.2E-44 302.4 17.3 269 2-280 8-319 (319)
27 COG3424 BcsA Predicted naringe 100.0 6.7E-38 1.5E-42 280.1 20.5 265 16-281 64-354 (356)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 3.3E-37 7.1E-42 294.8 20.0 274 2-280 7-378 (378)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 3.3E-36 7.1E-41 287.4 20.6 241 27-279 94-371 (372)
30 cd00827 init_cond_enzymes "ini 100.0 1.1E-35 2.3E-40 277.9 18.2 266 2-277 6-324 (324)
31 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.7E-33 3.7E-38 269.1 18.2 270 2-282 5-320 (379)
32 PLN02577 hydroxymethylglutaryl 100.0 1.9E-30 4.1E-35 251.2 17.6 269 2-282 9-373 (459)
33 COG3425 PksG 3-hydroxy-3-methy 100.0 9.4E-31 2E-35 243.4 14.4 277 2-287 7-318 (377)
34 cd00327 cond_enzymes Condensin 100.0 2.5E-29 5.4E-34 226.7 14.4 231 27-277 6-254 (254)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 5.2E-29 1.1E-33 240.9 17.1 271 2-282 6-376 (454)
36 cd00825 decarbox_cond_enzymes 99.9 1.1E-27 2.4E-32 224.3 12.3 246 28-277 11-332 (332)
37 PF08392 FAE1_CUT1_RppA: FAE1/ 99.9 6.8E-27 1.5E-31 211.6 15.3 176 1-177 57-232 (290)
38 PF00195 Chal_sti_synt_N: Chal 99.9 1.2E-23 2.5E-28 185.7 12.1 140 13-152 85-226 (226)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 2.4E-21 5.1E-26 148.3 4.7 83 194-279 8-90 (90)
40 PRK06147 3-oxoacyl-(acyl carri 99.8 8.1E-19 1.7E-23 166.2 18.5 247 25-281 62-344 (348)
41 TIGR02845 spore_V_AD stage V s 99.8 6.6E-18 1.4E-22 155.2 18.4 237 24-285 46-319 (327)
42 PRK05656 acetyl-CoA acetyltran 99.7 1.4E-16 3E-21 153.3 18.5 252 25-279 23-392 (393)
43 cd00751 thiolase Thiolase are 99.7 1.4E-16 3E-21 153.1 17.4 251 25-278 19-385 (386)
44 PRK08304 stage V sporulation p 99.7 3.6E-16 7.9E-21 144.1 18.1 244 24-285 52-326 (337)
45 PRK09051 beta-ketothiolase; Pr 99.7 9.7E-16 2.1E-20 147.4 19.5 252 24-279 23-393 (394)
46 PRK07108 acetyl-CoA acetyltran 99.7 1.7E-15 3.6E-20 145.7 18.8 253 24-279 23-391 (392)
47 TIGR01930 AcCoA-C-Actrans acet 99.7 1.1E-15 2.4E-20 146.8 16.9 251 25-278 18-386 (386)
48 cd00834 KAS_I_II Beta-ketoacyl 99.7 7.7E-16 1.7E-20 148.3 15.6 217 26-249 69-351 (406)
49 PRK09052 acetyl-CoA acetyltran 99.7 2E-15 4.3E-20 145.4 17.6 252 25-279 28-398 (399)
50 PRK06205 acetyl-CoA acetyltran 99.7 2.6E-15 5.7E-20 145.0 17.9 253 25-280 23-403 (404)
51 PRK08235 acetyl-CoA acetyltran 99.7 3.6E-15 7.7E-20 143.5 17.9 252 25-279 23-392 (393)
52 smart00825 PKS_KS Beta-ketoacy 99.6 1.5E-15 3.3E-20 147.2 13.9 216 27-249 86-358 (424)
53 PRK08242 acetyl-CoA acetyltran 99.6 8.6E-15 1.9E-19 140.9 18.6 252 24-279 24-401 (402)
54 KOG1393 Hydroxymethylglutaryl- 99.6 1.9E-15 4.1E-20 139.3 13.2 274 2-285 16-382 (462)
55 PRK05790 putative acyltransfer 99.6 1.3E-14 2.8E-19 139.7 18.7 252 25-279 23-392 (393)
56 PRK06064 acetyl-CoA acetyltran 99.6 1.4E-14 3.1E-19 139.2 18.5 241 24-268 18-375 (389)
57 PRK06954 acetyl-CoA acetyltran 99.6 1.3E-14 2.8E-19 139.9 17.0 251 25-279 28-396 (397)
58 PRK08313 acetyl-CoA acetyltran 99.6 1.7E-14 3.7E-19 138.5 17.8 240 24-268 20-371 (386)
59 PRK07661 acetyl-CoA acetyltran 99.6 3.6E-14 7.9E-19 136.4 18.7 252 25-279 24-390 (391)
60 PRK12578 acetyl-CoA acetyltran 99.6 3.5E-14 7.5E-19 136.4 18.6 225 24-252 17-349 (385)
61 PRK12404 stage V sporulation p 99.6 5.9E-14 1.3E-18 128.9 18.8 244 24-285 50-324 (334)
62 PRK06059 lipid-transfer protei 99.6 3.2E-14 6.9E-19 137.3 18.0 95 25-121 20-116 (399)
63 cd00828 elong_cond_enzymes "el 99.6 1.4E-14 3.1E-19 139.8 15.5 216 26-249 70-350 (407)
64 PLN02287 3-ketoacyl-CoA thiola 99.6 3.2E-14 6.9E-19 138.8 17.9 260 24-288 67-443 (452)
65 PRK06025 acetyl-CoA acetyltran 99.6 3.3E-14 7.1E-19 136.8 17.4 97 24-121 25-123 (417)
66 TIGR03150 fabF beta-ketoacyl-a 99.6 2.8E-14 6.1E-19 137.6 16.8 244 27-277 70-406 (407)
67 PRK06445 acetyl-CoA acetyltran 99.6 5.7E-14 1.2E-18 135.3 17.8 252 25-279 29-393 (394)
68 cd00829 SCP-x_thiolase Thiolas 99.6 6.9E-14 1.5E-18 133.7 18.1 224 25-252 13-343 (375)
69 PF02797 Chal_sti_synt_C: Chal 99.6 3.4E-15 7.3E-20 124.7 6.3 85 196-280 59-150 (151)
70 PF01154 HMG_CoA_synt_N: Hydro 99.6 2.9E-15 6.2E-20 126.6 5.5 141 2-151 9-172 (174)
71 PRK13359 beta-ketoadipyl CoA t 99.6 2E-13 4.4E-18 131.5 18.9 96 25-121 23-121 (400)
72 PRK07314 3-oxoacyl-(acyl carri 99.6 7.7E-14 1.7E-18 135.0 15.9 246 27-279 71-409 (411)
73 PLN02644 acetyl-CoA C-acetyltr 99.6 2.2E-13 4.7E-18 131.2 18.6 252 25-279 22-392 (394)
74 PRK07850 acetyl-CoA acetyltran 99.6 2.8E-13 6E-18 130.1 18.7 250 25-279 23-386 (387)
75 PRK06501 3-oxoacyl-(acyl carri 99.5 2E-13 4.3E-18 132.8 16.8 245 28-279 75-422 (425)
76 TIGR02430 pcaF beta-ketoadipyl 99.5 5.4E-13 1.2E-17 128.5 18.4 96 25-121 22-120 (400)
77 PRK07851 acetyl-CoA acetyltran 99.5 5.2E-13 1.1E-17 129.0 18.3 251 25-279 24-404 (406)
78 cd00833 PKS polyketide synthas 99.5 1.3E-13 2.8E-18 133.4 14.1 217 26-249 85-358 (421)
79 PRK06366 acetyl-CoA acetyltran 99.5 5.6E-13 1.2E-17 128.1 18.3 252 25-280 23-387 (388)
80 PRK09050 beta-ketoadipyl CoA t 99.5 5.5E-13 1.2E-17 128.6 18.0 96 25-121 23-121 (401)
81 PRK08963 fadI 3-ketoacyl-CoA t 99.5 5.1E-13 1.1E-17 129.9 17.9 97 24-121 25-122 (428)
82 PRK08131 acetyl-CoA acetyltran 99.5 8.1E-13 1.8E-17 127.4 18.9 96 25-121 23-120 (401)
83 PRK06633 acetyl-CoA acetyltran 99.5 3.7E-13 8.1E-18 129.3 16.5 97 24-121 23-120 (392)
84 cd00826 nondecarbox_cond_enzym 99.5 5.1E-13 1.1E-17 128.6 17.2 95 25-121 20-116 (393)
85 PRK06158 thiolase; Provisional 99.5 9.1E-13 2E-17 126.5 18.6 193 24-222 24-299 (384)
86 PRK06504 acetyl-CoA acetyltran 99.5 9.7E-13 2.1E-17 126.4 18.6 246 25-278 23-388 (390)
87 PRK08439 3-oxoacyl-(acyl carri 99.5 4.5E-13 9.7E-18 129.6 15.9 242 28-279 72-405 (406)
88 PRK08256 lipid-transfer protei 99.5 9E-13 1.9E-17 126.9 17.9 240 25-270 19-381 (391)
89 PRK06065 acetyl-CoA acetyltran 99.5 1.3E-12 2.8E-17 125.6 18.9 95 24-120 25-121 (392)
90 PRK06333 3-oxoacyl-(acyl carri 99.5 3.6E-13 7.7E-18 130.9 15.0 245 27-279 81-421 (424)
91 PRK07103 polyketide beta-ketoa 99.5 2.9E-13 6.3E-18 131.1 14.1 244 28-278 80-409 (410)
92 PRK06690 acetyl-CoA acetyltran 99.5 1.1E-12 2.4E-17 124.7 17.2 245 25-280 22-360 (361)
93 PRK07516 acetyl-CoA acetyltran 99.5 1.5E-12 3.2E-17 125.3 18.0 225 24-252 18-352 (389)
94 PRK07801 acetyl-CoA acetyltran 99.5 1.1E-12 2.4E-17 125.9 16.4 252 25-279 23-381 (382)
95 PRK08722 3-oxoacyl-(acyl carri 99.5 1.1E-12 2.4E-17 127.1 16.1 244 28-278 74-412 (414)
96 PTZ00050 3-oxoacyl-acyl carrie 99.5 1.7E-12 3.6E-17 126.2 16.6 248 26-279 75-420 (421)
97 PRK06289 acetyl-CoA acetyltran 99.5 2.5E-12 5.4E-17 124.3 17.6 223 24-252 22-368 (403)
98 cd00832 CLF Chain-length facto 99.5 1.8E-12 3.9E-17 125.1 16.1 214 26-249 69-344 (399)
99 TIGR02446 FadI fatty oxidation 99.5 2E-12 4.3E-17 125.7 16.3 96 25-121 28-124 (430)
100 PRK07967 3-oxoacyl-(acyl carri 99.5 9E-13 1.9E-17 127.4 13.6 240 27-279 70-403 (406)
101 PRK08947 fadA 3-ketoacyl-CoA t 99.5 3.3E-12 7.2E-17 122.7 17.4 251 25-278 24-385 (387)
102 PRK05952 3-oxoacyl-(acyl carri 99.4 1.4E-12 3E-17 125.0 14.6 237 31-278 59-380 (381)
103 TIGR02445 fadA fatty oxidation 99.4 5E-12 1.1E-16 121.4 17.4 252 25-279 22-384 (385)
104 PRK09116 3-oxoacyl-(acyl carri 99.4 4.6E-12 1E-16 122.5 16.2 241 28-278 73-405 (405)
105 PLN02787 3-oxoacyl-[acyl-carri 99.4 3.8E-12 8.2E-17 126.6 15.9 243 28-279 199-538 (540)
106 PRK06519 3-oxoacyl-(acyl carri 99.4 7.4E-12 1.6E-16 120.6 17.2 216 27-256 72-360 (398)
107 PRK06157 acetyl-CoA acetyltran 99.4 8.6E-12 1.9E-16 120.3 17.6 96 24-121 23-119 (398)
108 PRK14691 3-oxoacyl-(acyl carri 99.4 3.4E-12 7.3E-17 120.6 14.4 242 28-279 4-339 (342)
109 PLN02836 3-oxoacyl-[acyl-carri 99.4 6.4E-12 1.4E-16 122.7 15.7 245 28-279 93-435 (437)
110 PRK09185 3-oxoacyl-(acyl carri 99.4 2E-11 4.2E-16 117.7 17.0 201 65-279 138-390 (392)
111 PF08545 ACP_syn_III: 3-Oxoacy 99.4 1.2E-12 2.7E-17 97.8 6.6 74 83-165 1-74 (80)
112 PRK06365 acetyl-CoA acetyltran 99.4 2.3E-11 5E-16 118.4 17.0 95 25-121 34-130 (430)
113 PRK07910 3-oxoacyl-(acyl carri 99.4 2E-11 4.4E-16 118.5 16.0 242 28-279 83-417 (418)
114 PF00108 Thiolase_N: Thiolase, 99.3 4.5E-12 9.7E-17 115.8 10.0 98 24-122 22-120 (264)
115 PRK08170 acetyl-CoA acetyltran 99.3 1.2E-11 2.6E-16 120.4 10.7 96 25-121 24-120 (426)
116 PRK08257 acetyl-CoA acetyltran 99.3 3.9E-10 8.4E-15 111.7 19.5 241 27-271 26-388 (498)
117 PRK08142 acetyl-CoA acetyltran 99.2 4.4E-10 9.5E-15 108.0 18.3 222 24-252 21-348 (388)
118 PRK06066 acetyl-CoA acetyltran 99.2 9.3E-10 2E-14 105.6 18.1 221 25-252 22-350 (385)
119 COG0304 FabB 3-oxoacyl-(acyl-c 99.2 4.2E-10 9.2E-15 108.3 15.2 216 24-247 67-350 (412)
120 KOG1390 Acetyl-CoA acetyltrans 99.1 5.6E-10 1.2E-14 101.5 11.7 97 24-121 26-123 (396)
121 PF07451 SpoVAD: Stage V sporu 99.1 4.9E-09 1.1E-13 95.3 17.1 230 25-271 48-309 (329)
122 PTZ00455 3-ketoacyl-CoA thiola 99.1 6E-10 1.3E-14 108.7 11.1 97 24-121 44-151 (438)
123 TIGR02813 omega_3_PfaA polyket 99.1 2.1E-09 4.6E-14 122.3 15.8 208 66-280 185-462 (2582)
124 PRK09268 acetyl-CoA acetyltran 99.0 1.9E-09 4E-14 105.0 10.7 96 25-121 28-124 (427)
125 PRK07937 lipid-transfer protei 99.0 2.2E-08 4.8E-13 95.1 16.7 229 29-268 25-337 (352)
126 PF00109 ketoacyl-synt: Beta-k 98.9 4.6E-09 9.9E-14 94.7 10.3 121 26-151 85-251 (254)
127 KOG1389 3-oxoacyl CoA thiolase 98.8 1.8E-08 4E-13 91.5 8.8 99 23-123 56-156 (435)
128 KOG1394 3-oxoacyl-(acyl-carrie 98.7 1.9E-08 4.1E-13 93.0 6.6 205 27-241 93-369 (440)
129 PRK07855 lipid-transfer protei 98.6 1.3E-07 2.9E-12 91.0 9.8 89 24-117 20-108 (386)
130 COG3321 Polyketide synthase mo 98.6 1.2E-06 2.6E-11 93.9 17.0 221 22-249 85-361 (1061)
131 COG0183 PaaJ Acetyl-CoA acetyl 98.5 3.3E-07 7.2E-12 88.3 7.8 94 27-121 21-123 (392)
132 KOG1406 Peroxisomal 3-ketoacyl 98.2 1.2E-06 2.6E-11 78.3 4.8 94 24-121 25-118 (408)
133 KOG1391 Acetyl-CoA acetyltrans 98.2 1.9E-06 4.2E-11 76.7 6.0 96 25-121 25-122 (396)
134 KOG1392 Acetyl-CoA acetyltrans 97.6 5.4E-05 1.2E-09 68.6 3.6 94 27-121 65-159 (465)
135 PF08540 HMG_CoA_synt_C: Hydro 96.9 0.00064 1.4E-08 62.5 2.6 63 223-285 143-207 (282)
136 KOG1202 Animal-type fatty acid 96.8 0.0029 6.3E-08 67.0 7.4 242 28-283 87-419 (2376)
137 PF13723 Ketoacyl-synt_2: Beta 96.4 0.062 1.3E-06 47.7 11.7 113 28-153 34-172 (218)
138 PF08541 ACP_syn_III_C: 3-Oxoa 95.4 0.018 4E-07 43.3 3.7 74 40-117 1-77 (90)
139 TIGR00748 HMG_CoA_syn_Arc hydr 95.2 0.061 1.3E-06 51.0 7.2 83 28-116 206-293 (345)
140 PRK08170 acetyl-CoA acetyltran 94.3 0.098 2.1E-06 51.1 6.3 142 135-279 262-425 (426)
141 PRK06816 3-oxoacyl-(acyl carri 94.3 0.24 5.2E-06 47.5 8.9 91 26-120 268-366 (378)
142 PF02803 Thiolase_C: Thiolase, 94.1 0.055 1.2E-06 43.7 3.4 96 182-279 28-123 (123)
143 PRK07204 3-oxoacyl-(acyl carri 93.8 0.2 4.3E-06 46.9 7.2 83 27-116 227-315 (329)
144 PRK05963 3-oxoacyl-(acyl carri 93.6 0.16 3.5E-06 47.5 6.1 83 28-117 225-313 (326)
145 PRK09258 3-oxoacyl-(acyl carri 93.5 0.22 4.7E-06 46.8 6.9 87 28-118 237-326 (338)
146 CHL00203 fabH 3-oxoacyl-acyl-c 93.2 0.25 5.4E-06 46.3 6.8 80 30-116 226-311 (326)
147 TIGR00747 fabH 3-oxoacyl-(acyl 93.1 0.22 4.8E-06 46.3 6.2 81 29-116 218-304 (318)
148 PRK12879 3-oxoacyl-(acyl carri 92.9 0.33 7.2E-06 45.2 7.2 80 30-116 225-310 (325)
149 PRK04262 hypothetical protein; 92.8 0.26 5.7E-06 46.6 6.4 82 29-116 208-294 (347)
150 COG3425 PksG 3-hydroxy-3-methy 92.3 1.1 2.5E-05 42.8 9.8 99 25-151 204-309 (377)
151 cd00830 KAS_III Ketoacyl-acyl 92.2 0.38 8.2E-06 44.6 6.5 83 28-117 221-309 (320)
152 PRK06840 hypothetical protein; 92.0 0.68 1.5E-05 43.5 8.1 81 29-116 236-321 (339)
153 PRK06147 3-oxoacyl-(acyl carri 92.0 0.34 7.4E-06 46.0 6.0 87 31-117 235-329 (348)
154 PLN02326 3-oxoacyl-[acyl-carri 91.6 0.7 1.5E-05 44.4 7.7 81 29-116 279-365 (379)
155 cd00825 decarbox_cond_enzymes 90.9 1.2 2.6E-05 41.3 8.4 78 30-107 205-286 (332)
156 PTZ00455 3-ketoacyl-CoA thiola 90.8 0.93 2E-05 44.5 7.8 115 135-251 254-400 (438)
157 PRK07515 3-oxoacyl-(acyl carri 90.7 0.61 1.3E-05 44.6 6.4 84 27-116 268-357 (372)
158 PRK06025 acetyl-CoA acetyltran 90.7 0.98 2.1E-05 44.1 7.8 74 33-113 318-399 (417)
159 PRK09352 3-oxoacyl-(acyl carri 90.4 0.82 1.8E-05 42.4 6.8 81 29-116 218-304 (319)
160 COG0332 FabH 3-oxoacyl-[acyl-c 89.6 0.58 1.3E-05 44.0 5.1 58 25-86 218-275 (323)
161 cd00831 CHS_like Chalcone and 88.6 1.4 2.9E-05 41.9 6.9 86 27-116 256-349 (361)
162 cd00327 cond_enzymes Condensin 88.5 2.3 4.9E-05 37.7 8.0 87 29-116 144-242 (254)
163 PRK09268 acetyl-CoA acetyltran 87.9 1.6 3.5E-05 42.7 7.0 142 135-278 260-426 (427)
164 COG1214 Inactive homolog of me 86.1 3 6.6E-05 37.0 7.2 62 25-86 34-96 (220)
165 PRK08257 acetyl-CoA acetyltran 85.8 2.7 5.9E-05 42.0 7.5 81 32-116 294-382 (498)
166 TIGR01835 HMG-CoA-S_prok 3-hyd 85.5 2.7 5.8E-05 40.4 7.0 31 27-57 202-232 (379)
167 PRK06519 3-oxoacyl-(acyl carri 84.0 3.1 6.8E-05 40.3 6.8 76 31-107 281-357 (398)
168 PLN03169 chalcone synthase fam 83.7 4.9 0.00011 38.8 8.0 86 29-116 280-374 (391)
169 COG0304 FabB 3-oxoacyl-(acyl-c 83.5 2 4.4E-05 41.8 5.3 45 31-75 277-322 (412)
170 PF02801 Ketoacyl-synt_C: Beta 82.7 0.36 7.7E-06 38.3 -0.2 76 32-107 27-110 (119)
171 PF02801 Ketoacyl-synt_C: Beta 82.1 1.1 2.4E-05 35.5 2.4 68 179-250 28-104 (119)
172 cd00751 thiolase Thiolase are 82.0 5.7 0.00012 38.1 7.8 42 32-77 287-328 (386)
173 PRK12880 3-oxoacyl-(acyl carri 81.5 4 8.6E-05 38.8 6.4 49 28-80 240-288 (353)
174 PRK06690 acetyl-CoA acetyltran 80.9 5.3 0.00012 38.2 7.0 78 31-114 259-343 (361)
175 cd00827 init_cond_enzymes "ini 80.8 5.3 0.00011 36.9 6.9 89 25-118 218-314 (324)
176 PLN02787 3-oxoacyl-[acyl-carri 80.1 4.2 9.2E-05 41.1 6.3 76 32-107 407-487 (540)
177 PRK09050 beta-ketoadipyl CoA t 79.8 5.8 0.00013 38.5 7.0 51 32-86 299-349 (401)
178 PRK05656 acetyl-CoA acetyltran 79.6 9.6 0.00021 36.8 8.4 41 33-77 294-334 (393)
179 cd00829 SCP-x_thiolase Thiolas 79.5 8.4 0.00018 36.6 8.0 45 30-78 251-295 (375)
180 PRK07314 3-oxoacyl-(acyl carri 79.3 3.4 7.4E-05 39.9 5.2 76 32-107 278-359 (411)
181 cd00834 KAS_I_II Beta-ketoacyl 78.2 4 8.6E-05 39.1 5.3 78 30-107 275-358 (406)
182 TIGR01930 AcCoA-C-Actrans acet 78.2 6.1 0.00013 38.1 6.5 79 32-116 288-373 (386)
183 PRK13359 beta-ketoadipyl CoA t 77.9 7 0.00015 38.0 6.9 51 32-86 298-348 (400)
184 PF02803 Thiolase_C: Thiolase, 77.4 5.4 0.00012 32.1 5.0 76 32-114 24-107 (123)
185 cd00828 elong_cond_enzymes "el 77.1 4.7 0.0001 38.8 5.5 78 30-107 274-357 (407)
186 PRK06205 acetyl-CoA acetyltran 76.8 7.6 0.00016 37.7 6.8 42 32-77 300-341 (404)
187 PRK09604 UGMP family protein; 76.4 8.6 0.00019 36.3 6.9 50 26-76 49-104 (332)
188 TIGR02430 pcaF beta-ketoadipyl 76.4 6.8 0.00015 38.0 6.3 51 32-86 298-348 (400)
189 TIGR03150 fabF beta-ketoacyl-a 76.3 5.6 0.00012 38.2 5.8 76 32-107 277-358 (407)
190 PRK05790 putative acyltransfer 76.3 8.7 0.00019 37.0 7.1 42 32-77 293-334 (393)
191 PRK09052 acetyl-CoA acetyltran 76.2 6 0.00013 38.3 5.9 43 31-77 298-340 (399)
192 PRK05952 3-oxoacyl-(acyl carri 75.4 4.9 0.00011 38.7 5.0 76 30-107 254-334 (381)
193 cd00832 CLF Chain-length facto 75.2 6.5 0.00014 38.0 5.9 77 30-107 270-351 (399)
194 PRK09051 beta-ketothiolase; Pr 75.0 8.2 0.00018 37.3 6.5 42 32-77 294-335 (394)
195 PRK14691 3-oxoacyl-(acyl carri 75.0 8.1 0.00017 36.7 6.3 48 29-76 205-253 (342)
196 PRK09185 3-oxoacyl-(acyl carri 74.2 6.6 0.00014 37.8 5.6 73 33-107 263-340 (392)
197 PRK06064 acetyl-CoA acetyltran 73.3 13 0.00029 35.6 7.5 42 32-77 260-301 (389)
198 PLN02287 3-ketoacyl-CoA thiola 73.0 14 0.0003 36.5 7.6 96 32-153 333-437 (452)
199 PRK07910 3-oxoacyl-(acyl carri 71.9 8.1 0.00018 37.7 5.7 76 31-107 287-367 (418)
200 PRK06501 3-oxoacyl-(acyl carri 71.5 6.4 0.00014 38.4 4.9 76 32-107 291-372 (425)
201 TIGR00329 gcp_kae1 metallohydr 71.3 13 0.00028 34.6 6.7 33 28-60 48-80 (305)
202 PRK06366 acetyl-CoA acetyltran 70.8 15 0.00033 35.4 7.2 77 32-114 287-370 (388)
203 PRK06333 3-oxoacyl-(acyl carri 70.7 7.6 0.00016 37.7 5.2 78 30-107 288-370 (424)
204 PRK09116 3-oxoacyl-(acyl carri 70.4 7.7 0.00017 37.6 5.2 45 31-75 276-321 (405)
205 PTZ00050 3-oxoacyl-acyl carrie 70.4 13 0.00028 36.2 6.7 78 30-107 283-368 (421)
206 TIGR03723 bact_gcp putative gl 69.8 15 0.00031 34.5 6.7 57 26-86 47-108 (314)
207 PRK07516 acetyl-CoA acetyltran 69.6 12 0.00025 36.1 6.1 44 30-77 260-303 (389)
208 PRK07850 acetyl-CoA acetyltran 69.5 20 0.00044 34.5 7.8 43 31-77 286-328 (387)
209 PRK06445 acetyl-CoA acetyltran 69.5 20 0.00042 34.7 7.7 77 32-115 294-378 (394)
210 PRK08722 3-oxoacyl-(acyl carri 69.3 10 0.00022 36.9 5.7 77 31-107 279-362 (414)
211 TIGR03725 bact_YeaZ universal 68.9 6.2 0.00013 34.4 3.8 35 26-60 31-65 (202)
212 PF07736 CM_1: Chorismate muta 68.9 15 0.00032 29.4 5.5 51 32-86 22-75 (118)
213 PRK08242 acetyl-CoA acetyltran 68.8 16 0.00034 35.6 6.9 41 33-77 303-343 (402)
214 TIGR01796 CM_mono_aroH monofun 68.5 12 0.00026 29.8 4.9 50 34-87 24-76 (117)
215 PRK07851 acetyl-CoA acetyltran 68.5 9.4 0.0002 37.1 5.3 42 32-77 305-346 (406)
216 PRK06289 acetyl-CoA acetyltran 67.9 29 0.00064 33.5 8.6 42 32-77 278-319 (403)
217 COG0533 QRI7 Metal-dependent p 67.5 15 0.00033 34.7 6.2 65 30-96 52-117 (342)
218 PF01135 PCMT: Protein-L-isoas 67.2 6.4 0.00014 34.6 3.5 42 234-275 49-90 (209)
219 TIGR02445 fadA fatty oxidation 66.9 30 0.00064 33.4 8.3 42 32-77 282-323 (385)
220 KOG2708 Predicted metalloprote 66.3 27 0.00058 31.4 7.1 64 24-94 49-114 (336)
221 PRK08235 acetyl-CoA acetyltran 66.1 14 0.00031 35.7 6.0 43 31-77 292-334 (393)
222 PRK14878 UGMP family protein; 65.8 11 0.00023 35.5 4.9 48 30-77 46-98 (323)
223 PRK08256 lipid-transfer protei 65.3 23 0.00049 34.1 7.2 43 32-78 266-308 (391)
224 PRK07801 acetyl-CoA acetyltran 64.4 23 0.0005 33.9 7.1 42 33-78 283-324 (382)
225 PF00814 Peptidase_M22: Glycop 64.3 6.5 0.00014 35.9 3.1 55 28-86 29-88 (268)
226 smart00825 PKS_KS Beta-ketoacy 63.9 16 0.00034 35.3 5.9 78 30-107 279-365 (424)
227 PRK07661 acetyl-CoA acetyltran 63.7 16 0.00035 35.3 5.9 77 31-114 290-374 (391)
228 PRK06158 thiolase; Provisional 63.5 27 0.00059 33.5 7.4 42 32-77 256-297 (384)
229 PLN02836 3-oxoacyl-[acyl-carri 63.5 15 0.00033 35.9 5.8 26 31-56 300-325 (437)
230 KOG2707 Predicted metalloprote 63.5 13 0.00028 35.3 4.8 46 32-77 86-136 (405)
231 PRK09585 anmK anhydro-N-acetyl 63.5 22 0.00047 34.1 6.5 59 19-77 60-126 (365)
232 PRK07855 lipid-transfer protei 62.7 38 0.00083 32.6 8.2 25 32-56 268-292 (386)
233 cd00833 PKS polyketide synthas 62.7 16 0.00034 35.1 5.6 79 29-107 278-365 (421)
234 PRK07937 lipid-transfer protei 62.5 36 0.00077 32.4 7.9 77 34-116 250-334 (352)
235 PRK06954 acetyl-CoA acetyltran 62.3 17 0.00037 35.2 5.7 24 31-54 296-319 (397)
236 PLN03173 chalcone synthase; Pr 61.4 29 0.00063 33.6 7.1 49 28-80 275-323 (391)
237 cd02185 AroH Chorismate mutase 59.8 25 0.00055 28.0 5.2 52 33-87 23-76 (117)
238 PRK06504 acetyl-CoA acetyltran 58.7 45 0.00097 32.2 7.9 45 30-78 288-332 (390)
239 PLN03171 chalcone synthase-lik 58.7 50 0.0011 32.0 8.3 86 26-116 275-380 (399)
240 PRK06059 lipid-transfer protei 58.4 47 0.001 32.0 8.0 43 32-78 275-317 (399)
241 PLN03170 chalcone synthase; Pr 58.2 38 0.00081 32.9 7.3 49 28-80 279-327 (401)
242 PLN02644 acetyl-CoA C-acetyltr 58.1 25 0.00054 34.0 6.0 41 33-77 294-334 (394)
243 PRK08947 fadA 3-ketoacyl-CoA t 58.0 46 0.001 32.0 7.9 42 32-77 284-325 (387)
244 TIGR03722 arch_KAE1 universal 57.7 16 0.00034 34.3 4.5 46 31-76 48-98 (322)
245 TIGR02446 FadI fatty oxidation 57.4 67 0.0014 31.5 9.0 24 33-56 314-337 (430)
246 PRK07103 polyketide beta-ketoa 56.7 25 0.00055 34.0 5.9 24 33-56 284-307 (410)
247 PRK13410 molecular chaperone D 56.6 41 0.0009 35.0 7.7 70 26-99 305-374 (668)
248 COG2518 Pcm Protein-L-isoaspar 55.2 13 0.00029 32.7 3.3 41 234-274 49-89 (209)
249 KOG1394 3-oxoacyl-(acyl-carrie 53.9 16 0.00035 34.9 3.7 46 31-76 302-348 (440)
250 PRK12578 acetyl-CoA acetyltran 52.7 35 0.00076 32.7 6.1 43 32-78 259-301 (385)
251 PTZ00340 O-sialoglycoprotein e 52.3 52 0.0011 31.4 7.0 53 29-86 50-108 (345)
252 PRK08131 acetyl-CoA acetyltran 52.2 38 0.00082 32.9 6.2 26 31-56 297-322 (401)
253 PRK06633 acetyl-CoA acetyltran 52.1 32 0.0007 33.3 5.7 25 31-55 291-315 (392)
254 PTZ00186 heat shock 70 kDa pre 52.1 64 0.0014 33.5 8.2 68 28-99 332-399 (657)
255 cd00826 nondecarbox_cond_enzym 51.4 39 0.00084 32.6 6.2 42 32-77 271-312 (393)
256 PLN03168 chalcone synthase; Pr 51.4 23 0.0005 34.2 4.6 67 193-265 119-189 (389)
257 PF08392 FAE1_CUT1_RppA: FAE1/ 51.0 37 0.0008 31.5 5.6 67 194-266 102-172 (290)
258 PRK06365 acetyl-CoA acetyltran 50.3 39 0.00084 33.1 6.0 44 31-78 294-339 (430)
259 PLN03184 chloroplast Hsp70; Pr 49.7 58 0.0013 33.9 7.5 68 27-98 343-410 (673)
260 TIGR01991 HscA Fe-S protein as 49.7 1.2E+02 0.0025 31.1 9.6 51 26-77 289-339 (599)
261 CHL00094 dnaK heat shock prote 49.4 62 0.0013 33.3 7.6 50 27-77 306-355 (621)
262 PRK08963 fadI 3-ketoacyl-CoA t 48.9 65 0.0014 31.5 7.4 25 32-56 311-335 (428)
263 PLN02854 3-ketoacyl-CoA syntha 47.7 90 0.002 31.5 8.2 42 32-77 387-434 (521)
264 PLN03172 chalcone synthase fam 47.5 47 0.001 32.1 6.1 67 194-266 121-191 (393)
265 PRK05183 hscA chaperone protei 47.2 1.2E+02 0.0027 31.1 9.4 67 28-98 307-373 (616)
266 PF12633 Adenyl_cycl_N: Adenyl 46.4 10 0.00022 33.2 1.2 58 194-253 114-193 (204)
267 PRK12404 stage V sporulation p 44.2 1E+02 0.0022 29.2 7.4 87 33-120 209-310 (334)
268 PLN00415 3-ketoacyl-CoA syntha 44.2 61 0.0013 32.2 6.3 66 194-265 153-222 (466)
269 PRK08304 stage V sporulation p 44.0 1E+02 0.0022 29.2 7.5 87 33-120 211-312 (337)
270 PF12244 DUF3606: Protein of u 44.0 15 0.00033 25.2 1.5 28 208-238 21-48 (57)
271 PRK08142 acetyl-CoA acetyltran 44.0 33 0.00071 33.1 4.4 26 31-56 256-281 (388)
272 PRK09605 bifunctional UGMP fam 43.6 35 0.00076 34.2 4.7 46 32-77 52-102 (535)
273 PLN02192 3-ketoacyl-CoA syntha 42.8 70 0.0015 32.2 6.5 66 194-265 195-264 (511)
274 PRK00290 dnaK molecular chaper 42.8 93 0.002 32.0 7.7 68 27-98 304-371 (627)
275 KOG1406 Peroxisomal 3-ketoacyl 42.5 26 0.00056 32.1 3.1 28 29-56 271-298 (408)
276 TIGR03285 methan_mark_14 putat 41.9 33 0.00071 32.8 3.8 36 22-57 59-94 (445)
277 PF00195 Chal_sti_synt_N: Chal 41.8 38 0.00083 30.2 4.1 69 194-268 119-191 (226)
278 PLN02377 3-ketoacyl-CoA syntha 41.2 67 0.0015 32.3 6.1 66 194-265 191-260 (502)
279 PRK07108 acetyl-CoA acetyltran 40.8 41 0.00089 32.5 4.5 24 31-54 291-314 (392)
280 TIGR02845 spore_V_AD stage V s 39.7 1.3E+02 0.0028 28.4 7.4 86 33-120 205-305 (327)
281 TIGR02350 prok_dnaK chaperone 39.6 93 0.002 31.7 7.1 68 27-98 302-369 (595)
282 PRK13411 molecular chaperone D 38.3 1E+02 0.0023 31.9 7.3 48 28-76 306-353 (653)
283 PRK06157 acetyl-CoA acetyltran 37.2 1.3E+02 0.0028 29.1 7.3 43 32-78 268-312 (398)
284 PTZ00400 DnaK-type molecular c 37.2 87 0.0019 32.5 6.5 48 29-77 347-394 (663)
285 PF07451 SpoVAD: Stage V sporu 36.3 50 0.0011 30.9 4.1 86 34-120 207-307 (329)
286 PTZ00009 heat shock 70 kDa pro 36.2 1.3E+02 0.0027 31.3 7.5 66 31-99 314-379 (653)
287 PF11392 DUF2877: Protein of u 35.5 1.6E+02 0.0035 23.0 6.4 52 199-250 58-109 (110)
288 TIGR02813 omega_3_PfaA polyket 35.4 63 0.0014 39.0 5.6 75 33-107 318-401 (2582)
289 COG4087 Soluble P-type ATPase 34.0 62 0.0013 26.6 3.7 77 178-269 28-104 (152)
290 PF03702 UPF0075: Uncharacteri 33.5 55 0.0012 31.4 4.0 59 19-77 57-125 (364)
291 PRK06066 acetyl-CoA acetyltran 32.7 2.2E+02 0.0047 27.5 8.1 42 33-78 259-302 (385)
292 PLN02932 3-ketoacyl-CoA syntha 30.3 1.1E+02 0.0025 30.4 5.8 66 194-265 167-236 (478)
293 PRK08439 3-oxoacyl-(acyl carri 30.3 2E+02 0.0044 27.7 7.5 76 30-107 274-355 (406)
294 PRK08313 acetyl-CoA acetyltran 30.3 84 0.0018 30.2 4.8 44 30-77 255-300 (386)
295 PRK08329 threonine synthase; V 29.0 67 0.0015 30.4 3.8 62 209-270 276-344 (347)
296 PF09887 DUF2114: Uncharacteri 28.9 80 0.0017 30.4 4.1 36 22-57 61-97 (448)
297 COG2377 Predicted molecular ch 26.8 1.4E+02 0.003 28.7 5.3 60 19-78 62-131 (371)
298 COG4126 Hydantoin racemase [Am 26.8 2.9E+02 0.0063 24.7 7.0 65 25-108 155-219 (230)
299 PF06089 Asparaginase_II: L-as 25.6 1.6E+02 0.0035 27.8 5.6 71 25-105 74-144 (324)
300 PF05378 Hydant_A_N: Hydantoin 25.4 65 0.0014 27.4 2.7 33 26-58 33-65 (176)
301 COG3072 CyaA Adenylate cyclase 24.1 42 0.00091 34.4 1.5 58 194-253 115-194 (853)
302 KOG0103 Molecular chaperones H 23.8 1.3E+02 0.0027 31.4 4.7 65 34-102 318-382 (727)
303 PLN02569 threonine synthase 22.1 95 0.0021 31.0 3.6 38 238-275 407-444 (484)
304 PRK07591 threonine synthase; V 21.6 1.5E+02 0.0033 28.9 4.8 59 217-275 334-396 (421)
305 PF09663 Amido_AtzD_TrzD: Amid 21.3 3.4E+02 0.0075 25.9 6.7 33 25-57 127-160 (365)
306 PF08784 RPA_C: Replication pr 20.7 61 0.0013 24.6 1.5 32 209-240 67-98 (102)
307 COG0443 DnaK Molecular chapero 20.5 3.7E+02 0.0081 27.5 7.5 69 29-102 289-357 (579)
308 PF14574 DUF4445: Domain of un 20.5 1.4E+02 0.0031 29.2 4.3 43 35-80 313-355 (412)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1e-54 Score=422.27 Aligned_cols=308 Identities=77% Similarity=1.285 Sum_probs=269.1
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|.+.|+|+...+.|+. ..+....+...++...|+++||+++|++|+|||.||++|++++..|+++.+|++++|+++++
T Consensus 150 lg~~t~~p~~~~~~~~~-~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i 228 (511)
T PLN02192 150 LGESTYLPEAVLNVPPN-PCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI 228 (511)
T ss_pred CCCcccCChhhccCCCC-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCc
Confidence 58899999999999988 68999999999999999999999999999999999999888889999999999999998789
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
.+|+++++||++++.||.+|.+++++++.+++|||++|.+|.+|+...||.+.++..+|||||+|+||++.+.+...+.|
T Consensus 229 ~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~ 308 (511)
T PLN02192 229 LSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKY 308 (511)
T ss_pred eEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccc
Confidence 99999978999999999999999999999999999999999888766788876677999999999999986533323446
Q ss_pred ceeeeeecccCCCCc-------------------------------------------------ch-----HHHHHHHhh
Q 041111 161 ELVHTLRTHKGGDDR-------------------------------------------------SF-----GRKIFKMKI 186 (311)
Q Consensus 161 ~l~~~~~~~~~~~~~-------------------------------------------------~~-----g~~~~~~a~ 186 (311)
++.+..+++.+.++. .| |+++|+.++
T Consensus 309 ~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~ 388 (511)
T PLN02192 309 QLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKL 388 (511)
T ss_pred eeeeeEEEEecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHh
Confidence 666543332221100 00 566677666
Q ss_pred ccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 187 KPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 187 ~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
+.+.+.+..+||+|++||+|+++++.+++.||++++++..++.++++||||+|+|+++.|+++.++|++++||+|++++|
T Consensus 389 ~~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaF 468 (511)
T PLN02192 389 KPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAF 468 (511)
T ss_pred hhccHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 66677778899999999999999999999999998666666899999999999999999999999999999999999999
Q ss_pred chhHHHhhheeeEeccCCCCCCCCCcccccccCCCCCCCCCCC
Q 041111 267 GSGFKCNSAVWRALRTINPAHEKNPWMDEIDNFPVHVPKVMPI 309 (311)
Q Consensus 267 G~G~~~~a~llr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (311)
|+|++|++++|||.+++++..++|||.|.|+.+|+++|.+..|
T Consensus 469 GsGf~~~sav~~~~~~~~~~~~~~~w~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 469 GSGFKCNSAVWKALRTVNPAKEKNPWMDEIHEFPVDVPKVSTI 511 (511)
T ss_pred cchHhhhhhheeeecccCCcccCCCchhhHHhCCCCCCCCCCC
Confidence 9999999999999999977666799999999999999988654
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=8.3e-52 Score=402.80 Aligned_cols=304 Identities=68% Similarity=1.172 Sum_probs=255.6
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|++.|+|+...+.|+. ..+....+........|++++|+++|++|+|||.||++|++++..|+++.+|++++|+++++
T Consensus 162 ~g~~ty~P~~~~~~~~~-~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i 240 (521)
T PLN02854 162 LGDETYLPRGITSRPPN-LCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDI 240 (521)
T ss_pred CCCccccCccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCc
Confidence 58899999999999988 78999999999999999999999999999999999998888888999999999999998789
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
.+|+++++||++++.||.+|++++++++.+++|||++|.+|.+|+...||.++++..+|||||+|+||++.+.+.+...|
T Consensus 241 ~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~ 320 (521)
T PLN02854 241 KSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKY 320 (521)
T ss_pred eEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccch
Confidence 99999988999999999999999999999999999999999888766788877778999999999999986533223356
Q ss_pred ceeeeeecccCCCCc-----------------c-------h------------HHHH------HH-------H-----hh
Q 041111 161 ELVHTLRTHKGGDDR-----------------S-------F------------GRKI------FK-------M-----KI 186 (311)
Q Consensus 161 ~l~~~~~~~~~~~~~-----------------~-------~------------g~~~------~~-------~-----a~ 186 (311)
++.+..+++.+.++. . . |+.+ ++ . .+
T Consensus 321 ~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl 400 (521)
T PLN02854 321 QLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKV 400 (521)
T ss_pred heeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCC
Confidence 665544333211100 0 0 1111 10 0 01
Q ss_pred ccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 187 KPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 187 ~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
+..++++++|||+|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++|++++||+|++++|
T Consensus 401 ~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaF 480 (521)
T PLN02854 401 KPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAF 480 (521)
T ss_pred CccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 11122334689999999999999999999999996655566899999999999999999999999999999999999999
Q ss_pred chhHHHhhheeeEeccCCC-CCCCCCcccccccCCCCCCC
Q 041111 267 GSGFKCNSAVWRALRTINP-AHEKNPWMDEIDNFPVHVPK 305 (311)
Q Consensus 267 G~G~~~~a~llr~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (311)
|+|++|++++|||.+++++ ...+|||.|.|+.+|+++|.
T Consensus 481 GsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 481 GSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKVPV 520 (521)
T ss_pred chhhhhhheeeEEeccCCccccCCCCchhhHhhCCCCCCC
Confidence 9999999999999999855 34569999999999998753
No 3
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.4e-51 Score=397.43 Aligned_cols=301 Identities=63% Similarity=1.066 Sum_probs=257.1
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|.+.|+|....+.|.. +++..+.+...+|+.+|+++||+++|++|+|||.||++|++++..|+++.+|++++|+++++
T Consensus 122 ig~~t~~p~~~~~~~~~-~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i 200 (478)
T PLN02932 122 LGQETYIPEGLQCLPLQ-QNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNI 200 (478)
T ss_pred CCCceeeccccccCCHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCc
Confidence 47789999988888755 89999999999999999999999999999999999999876679999999999999998789
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
.+|+++++||++++.+|.+|++++++++.++||||++|.+|..++...+|..+++..+|||||+|+||++.+.+.....|
T Consensus 201 ~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~ 280 (478)
T PLN02932 201 KSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKY 280 (478)
T ss_pred eEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcce
Confidence 99999988999999999999999999999999999999999766554556656689999999999999987633223456
Q ss_pred ceeeeeecccCCCCc-------------------------------------------------ch-----HHHHHHHhh
Q 041111 161 ELVHTLRTHKGGDDR-------------------------------------------------SF-----GRKIFKMKI 186 (311)
Q Consensus 161 ~l~~~~~~~~~~~~~-------------------------------------------------~~-----g~~~~~~a~ 186 (311)
++.+..+++.+.++. .| ++++++..+
T Consensus 281 ~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~ 360 (478)
T PLN02932 281 ELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKL 360 (478)
T ss_pred EEEeeeeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHh
Confidence 676444333211100 00 334444444
Q ss_pred ccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 187 KPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 187 ~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
+.+.+.+.++||+|++||+|+++++.+++.||++++++..|+.++++||||+|+|+++.|++..++|++++||+|++++|
T Consensus 361 ~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaF 440 (478)
T PLN02932 361 KHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIAL 440 (478)
T ss_pred hcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 45556667899999999999999999999999999887777999999999999999999999999999999999999999
Q ss_pred chhHHHhhheeeEeccCCCCCCCCCcccccccCCCCC
Q 041111 267 GSGFKCNSAVWRALRTINPAHEKNPWMDEIDNFPVHV 303 (311)
Q Consensus 267 G~G~~~~a~llr~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (311)
|+|++|++++||..+++++. .+|||.|.|+.+|+++
T Consensus 441 GsGf~~~s~vw~~~~~~~~~-~~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 441 GSGFKCNSSVWVALRNVKPS-ANNPWEDCLHKYPVEI 476 (478)
T ss_pred eccHHHHHHHHHHhcCCCCc-CCCCchhhHhhCCCCC
Confidence 99999999999999998654 4599999999999964
No 4
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=5.4e-52 Score=383.54 Aligned_cols=269 Identities=22% Similarity=0.336 Sum_probs=228.5
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|.+.|+|++.+++.+. .||.+..+|...+|+.+|+++||+++|++|+|||+||++|+ |++.
T Consensus 8 g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~ 87 (323)
T COG0332 8 GIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL 87 (323)
T ss_pred EEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC
Confidence 6789999999998863 26677779999999999999999999999999999999974 7888
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
+|+.|.+||++||+. ++.+||++ .+|+|+++||.+|..+|++|.++++|||++|++|. +....||. ++.+||||
T Consensus 88 ~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~-~ld~~dR~---t~vlFgDG 161 (323)
T COG0332 88 FPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYKNVLVVGAETLSR-ILDWTDRD---TCVLFGDG 161 (323)
T ss_pred CChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhc-cCCHhhcc---ceEEEcCC
Confidence 999999999999999 69999999 79999999999999999999999999999999984 11226786 59999999
Q ss_pred eEEEEEecCCCCCCCCccceeeeee------cccC-----C--CC-cc---hHHHHHHHhhccchhhH-----------H
Q 041111 143 GAAILLSNRSSDRRRSKYELVHTLR------THKG-----G--DD-RS---FGRKIFKMKIKPYIPNF-----------K 194 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~~~~------~~~~-----~--~~-~~---~g~~~~~~a~~~~~~~~-----------~ 194 (311)
|+|+||++.+.......+++..... ...+ . .. .. .|+++|+.+++. +++. .
T Consensus 162 AgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~-~~~~~~~~L~~~~l~~ 240 (323)
T COG0332 162 AGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRA-MPKAIEEVLEKAGLTP 240 (323)
T ss_pred ceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHH-HHHHHHHHHHHcCCCH
Confidence 9999999997333221122211100 0000 0 01 11 189999998876 4432 5
Q ss_pred HhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhh
Q 041111 195 LAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNS 274 (311)
Q Consensus 195 ~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a 274 (311)
+|||||+|||.|.++++.+++.||+|++|+ ..++++||||++||+|++|++++++|++++||+++|++||.|++|++
T Consensus 241 ~dId~~vpHQan~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~ 317 (323)
T COG0332 241 EDIDWFVPHQANLRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGA 317 (323)
T ss_pred HHCCEEccccccHHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeee
Confidence 899999999999999999999999999999 79999999999999999999999999999999999999999999999
Q ss_pred heeeEe
Q 041111 275 AVWRAL 280 (311)
Q Consensus 275 ~llr~~ 280 (311)
+++||.
T Consensus 318 ~~~r~~ 323 (323)
T COG0332 318 ALVRWG 323 (323)
T ss_pred EEEEeC
Confidence 999984
No 5
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.7e-50 Score=391.15 Aligned_cols=301 Identities=63% Similarity=1.088 Sum_probs=247.3
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|.+.|+|+...+.++. .++....+...+++.+|+++||+++|++|+|||.||+.|++++..|+++.+|+++||+++++
T Consensus 146 ig~~t~~p~~~~~~~~~-~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v 224 (502)
T PLN02377 146 LGEDTYVPEAMHYIPPR-PSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI 224 (502)
T ss_pred CCCccccCchhccCCcc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCC
Confidence 46789999999998877 79999999999999999999999999999999999987778888999999999999998889
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
.+|+++++||++++.+|.+|.+++++++.++||||++|.+|..++..+++..+++..+|||||+|+||++.+.+...+.|
T Consensus 225 ~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~ 304 (502)
T PLN02377 225 RSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKY 304 (502)
T ss_pred eEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEeccccccccccc
Confidence 99999977999999999999999999999999999999999766544444545668999999999999985433222334
Q ss_pred ceeeeeeccc-----------------CCCCcc-------h------------HHHH-------H-----------HHhh
Q 041111 161 ELVHTLRTHK-----------------GGDDRS-------F------------GRKI-------F-----------KMKI 186 (311)
Q Consensus 161 ~l~~~~~~~~-----------------~~~~~~-------~------------g~~~-------~-----------~~a~ 186 (311)
++.+..+++. |..... . |+.+ + +..+
T Consensus 305 ~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l 384 (502)
T PLN02377 305 KLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKM 384 (502)
T ss_pred ccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4322221111 100000 0 1111 1 1111
Q ss_pred ccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 187 KPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 187 ~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
+...+...+|||+|++||+|+++++.+++.||++++++..++.++++||||+|+|+++.|+++.++|++++||++++++|
T Consensus 385 ~~~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaF 464 (502)
T PLN02377 385 KPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAF 464 (502)
T ss_pred hhccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEE
Confidence 11122345789999999999999999999999998766667999999999999999999999999999999999999999
Q ss_pred chhHHHhhheeeEeccCCCCCCCCCcccccccCCCCC
Q 041111 267 GSGFKCNSAVWRALRTINPAHEKNPWMDEIDNFPVHV 303 (311)
Q Consensus 267 G~G~~~~a~llr~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (311)
|+|++|++++|||.+++++. .+|||.|.|+.+|+++
T Consensus 465 GsGf~~~s~v~~~~~~~~~~-~~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 465 GSGFKCNSAVWEALRHVKPS-NNSPWEDCIDKYPVKL 500 (502)
T ss_pred ccccEeeeEEEEEecCCCCC-CCCCchhhHhhCCCcc
Confidence 99999999999999998654 4599999999999963
No 6
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.2e-47 Score=363.44 Aligned_cols=302 Identities=59% Similarity=1.049 Sum_probs=248.4
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|.+.|+|+..+..++. ..+...++....-...|++++|+++|++|+|||.||++|++++..|+.+.++++++|+++++
T Consensus 108 lg~et~~p~~~~~~~~~-~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v 186 (466)
T PLN00415 108 LGDDTYSPRCMLTSPPT-PSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDV 186 (466)
T ss_pred CCCCeeeCCccccCCCC-CChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCc
Confidence 47789999999999876 45565666666566668899999999999999999977777778999999999999999899
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
.+++++++||++++.+|++|.+++++++.+++|||++|.+|..++...||.++++..+|||||+|+||++.+.....+.|
T Consensus 187 ~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~ 266 (466)
T PLN00415 187 KTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKY 266 (466)
T ss_pred eEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccc
Confidence 99999977999999999999999999999999999999999766555678776778999999999999987654444578
Q ss_pred ceeeeeecccCCCCcc------------h-----HHHHH---HHh----hcc----------------------------
Q 041111 161 ELVHTLRTHKGGDDRS------------F-----GRKIF---KMK----IKP---------------------------- 188 (311)
Q Consensus 161 ~l~~~~~~~~~~~~~~------------~-----g~~~~---~~a----~~~---------------------------- 188 (311)
++.++.+++.+.++.. + .+++. .++ +..
T Consensus 267 ~L~~~vrt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~ 346 (466)
T PLN00415 267 ELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKV 346 (466)
T ss_pred eeeeEEEecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccC
Confidence 8876665554322111 1 11111 111 100
Q ss_pred --chhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 189 --YIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 189 --~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
++|+...-+++|++|++++++++.+++.||++++++.+|+.++++||||+|+|+++.|++..++++.++||++++++|
T Consensus 347 ~~~~pd~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaF 426 (466)
T PLN00415 347 SPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAF 426 (466)
T ss_pred CCCCCCccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEE
Confidence 011111127789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHhhheeeEeccCCC-CC-CCCCcccccccCCCCC
Q 041111 267 GSGFKCNSAVWRALRTINP-AH-EKNPWMDEIDNFPVHV 303 (311)
Q Consensus 267 G~G~~~~a~llr~~~~~~~-~~-~~~~~~~~~~~~~~~~ 303 (311)
|+|+++++++||+.+++++ ++ ++|||.|.|+.+|+++
T Consensus 427 GpGf~~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 427 GSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred cCcchhhHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999999999854 33 4699999999999964
No 7
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=4.8e-43 Score=335.37 Aligned_cols=267 Identities=21% Similarity=0.289 Sum_probs=209.6
Q ss_pred CCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceeeecCCccch
Q 041111 14 KPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI-LSYNFGGVGCSA 92 (311)
Q Consensus 14 ~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~i~~~~Cas 92 (311)
.|++.+|+..+.+...+|+.+|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++.+ .+++++ .||+|
T Consensus 87 ~ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g 165 (389)
T PLN03168 87 EPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFG 165 (389)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHH
Confidence 4577899999999999999999999999999999999999999865567899999999999998654 379999 79999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCC--ccchhhheecccceEEEEEecCCCCC-CCCccceeeeeecc
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGND--RSMLLTNCLFRLGGAAILLSNRSSDR-RRSKYELVHTLRTH 169 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~d--r~~~~~~~l~GDGAaA~vLs~~~~~~-~~~~~~l~~~~~~~ 169 (311)
++.||++|..++++++.++||||++|.+|..|+.+.+ .+++++..+|||||+|+||++.+... ....+++.......
T Consensus 166 ~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
T PLN03168 166 GASVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETI 245 (389)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEE
Confidence 9999999999999999999999999999976643222 33345789999999999999865421 11223333221111
Q ss_pred cC-----------CCCcch--HHHHHH---HhhccchhhH-------HHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 170 KG-----------GDDRSF--GRKIFK---MKIKPYIPNF-------KLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 170 ~~-----------~~~~~~--g~~~~~---~a~~~~~~~~-------~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
++ ..+..+ .+++++ ..+..++.+. ..|+++|++||+|+++++.+++.||+++|++..
T Consensus 246 ~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 246 LPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred EcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 11 011111 122222 2222222221 246778999999999999999999999999987
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCCCCCC--------CeEEEEeechhHHHhhheeeEecc
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKG--------DRTWQIAFGSGFKCNSAVWRALRT 282 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~G--------d~vll~~~G~G~~~~a~llr~~~~ 282 (311)
|++++++||||+|||+|+.|++++++ ++++| |++++++||+|++|++++|||..+
T Consensus 326 s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~~ 388 (389)
T PLN03168 326 SRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAAN 388 (389)
T ss_pred HHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhhhheeccc
Confidence 78899999999999999999999865 55554 899999999999999999999654
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.1e-43 Score=333.89 Aligned_cols=266 Identities=22% Similarity=0.282 Sum_probs=214.1
Q ss_pred CCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcce-eeecCCccch
Q 041111 14 KPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILS-YNFGGVGCSA 92 (311)
Q Consensus 14 ~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~-~~i~~~~Cas 92 (311)
.|++.+|+..+.+...+|+.+|+++||+++|++++|||+||++|++....|+.+.+|+++||+++.+.. ++++ .||+|
T Consensus 88 ~p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g 166 (393)
T PLN03172 88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFA 166 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHH
Confidence 356789999999999999999999999999999999999998876655699999999999999866644 6777 79999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCc--cchhhheecccceEEEEEecCCCCC-CCCccceeeeeecc
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDR--SMLLTNCLFRLGGAAILLSNRSSDR-RRSKYELVHTLRTH 169 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr--~~~~~~~l~GDGAaA~vLs~~~~~~-~~~~~~l~~~~~~~ 169 (311)
++.+|++|..++++++.++||||++|.+|..|..+.|+ +++++..+|||||+|+||++.+... ....|++.+..+..
T Consensus 167 ~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~ 246 (393)
T PLN03172 167 GGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTI 246 (393)
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEE
Confidence 99999999999999999999999999999656433443 3455789999999999999865431 12335666543222
Q ss_pred cCC-----------CC--cchHHHHHHHhhcc-------chhh---HHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 170 KGG-----------DD--RSFGRKIFKMKIKP-------YIPN---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 170 ~~~-----------~~--~~~g~~~~~~a~~~-------~~~~---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
++. .+ ..+.+++++.+.+. ++.. ...||++|++||+|+++++.+++.||++++++..
T Consensus 247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~ 326 (393)
T PLN03172 247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRA 326 (393)
T ss_pred ecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 111 11 11124444443332 1111 1368999999999999999999999999999988
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHH----HhCCCCCC---CeEEEEeechhHHHhhheeeEe
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFE----AKRRIRKG---DRTWQIAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~----~~g~l~~G---d~vll~~~G~G~~~~a~llr~~ 280 (311)
++.++++||||+|+|+|+.|++++ ++|++++| |++++++||+|++|++++|||.
T Consensus 327 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 327 TRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred HHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 888999999999999999999997 45788777 8999999999999999999994
No 9
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.7e-43 Score=328.70 Aligned_cols=268 Identities=18% Similarity=0.271 Sum_probs=213.5
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|.+.|+|++.+++.+. .|+++..+++..+|+++|+++||+++|++++|||.||++++ +++.
T Consensus 8 ~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~ 87 (326)
T PRK05963 8 GFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL 87 (326)
T ss_pred EEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC
Confidence 5678999998887642 14556677899999999999999999999999999999875 6788
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+.+|+++||++ ++.+++++ .+|+|++.||++|.++|+++ .+++|||++|.++..+ .+.++. +..+||||
T Consensus 88 ~p~~a~~v~~~Lg~~-~~~~~di~-~~C~g~~~aL~~A~~~l~~~-~~~aLVv~~d~~s~~~-~~~~~~---~~~lfGDg 160 (326)
T PRK05963 88 LPPSAPLLAHRLGLQ-NSGAIDLA-GACAGFLYALVLADGFVRAQ-GKPVLVVAANILSRRI-NMAERA---SAVLFADA 160 (326)
T ss_pred CCcHHHHHHHHhCCC-CCceeecc-chhhHHHHHHHHHHHHHHcC-CCeEEEEEechhhccC-CccccC---ceEEEeec
Confidence 999999999999998 68999999 59999999999999999998 4899999999987433 223444 47899999
Q ss_pred eEEEEEecCCCCC-CCCccceee------eeecccC---------CCC-c-ch----HHHHHHHhhcc-------chhh-
Q 041111 143 GAAILLSNRSSDR-RRSKYELVH------TLRTHKG---------GDD-R-SF----GRKIFKMKIKP-------YIPN- 192 (311)
Q Consensus 143 AaA~vLs~~~~~~-~~~~~~l~~------~~~~~~~---------~~~-~-~~----g~~~~~~a~~~-------~~~~- 192 (311)
|+|+||++++... ......+.. ....+.+ ... . .+ ++.+|+.+++. ++..
T Consensus 161 A~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 240 (326)
T PRK05963 161 AGAVVLAPSAKANSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASA 240 (326)
T ss_pred ceEEEEEecCCCCCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999876432 111111111 0010101 000 1 01 35555544332 1111
Q ss_pred --HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhH
Q 041111 193 --FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGF 270 (311)
Q Consensus 193 --~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~ 270 (311)
..+|||+|++||+|.++++.+.+.+|++++++ ..++++||||++||+|++|+++++++++++||+|+++++|+|+
T Consensus 241 gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~ 317 (326)
T PRK05963 241 AMTPQDIDRFFPHQANARIVDKVCETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGM 317 (326)
T ss_pred CCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhh
Confidence 25899999999999999999999999999998 6899999999999999999999999999999999999999999
Q ss_pred HHhhheeeE
Q 041111 271 KCNSAVWRA 279 (311)
Q Consensus 271 ~~~a~llr~ 279 (311)
+|++++|||
T Consensus 318 ~~~~~ll~~ 326 (326)
T PRK05963 318 TGGAVVMRV 326 (326)
T ss_pred hheeeEEeC
Confidence 999999997
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=332.26 Aligned_cols=266 Identities=23% Similarity=0.355 Sum_probs=212.4
Q ss_pred CCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceeeecCCccch
Q 041111 14 KPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI-LSYNFGGVGCSA 92 (311)
Q Consensus 14 ~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~i~~~~Cas 92 (311)
.++.++|+..++++..+|+.+|+++||+++|++++|||+||++|++++..|+.+..|+++||+++.+ .+++++ .||+|
T Consensus 92 ~~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g 170 (391)
T PLN03169 92 TPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSG 170 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHH
Confidence 3567789999999999999999999999999999999999999888889999999999999998655 379999 79999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCC-C-ccchhhheecccceEEEEEecCCCCC-CCCccceeeeeecc
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGN-D-RSMLLTNCLFRLGGAAILLSNRSSDR-RRSKYELVHTLRTH 169 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~-d-r~~~~~~~l~GDGAaA~vLs~~~~~~-~~~~~~l~~~~~~~ 169 (311)
+++||.+|..++++|+.++||||++|.++..++.+. + .....+..+|||||+|+||++.+... ....+++.......
T Consensus 171 ~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ 250 (391)
T PLN03169 171 GVAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQF 250 (391)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeE
Confidence 999999999999999999999999999886554221 1 12233578999999999999865421 11122332221111
Q ss_pred cCC-----------CCcch--HHHHHHHhhcc-------chhhH---HHhhh--hhhccCCChHHHHHHHHHcCCCcccc
Q 041111 170 KGG-----------DDRSF--GRKIFKMKIKP-------YIPNF---KLAFE--HICIRTGGRAVLDEVEKHLKLNEWVM 224 (311)
Q Consensus 170 ~~~-----------~~~~~--g~~~~~~a~~~-------~~~~~---~~did--~v~~h~~s~~~~~~~~~~lgi~~d~~ 224 (311)
++. .+..+ ++++++.+.+. ++... .+|+| +|++||.|+++++.+++.||++++++
T Consensus 251 ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~ 330 (391)
T PLN03169 251 LPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKL 330 (391)
T ss_pred cCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHH
Confidence 111 01111 56666555433 11111 35688 89999999999999999999999999
Q ss_pred chhHhhHhhcCCcchhhHHHHHHHHHHhCCCC---CCCeEEEEeechhHHHhhheeeEe
Q 041111 225 EPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIR---KGDRTWQIAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 225 ~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~---~Gd~vll~~~G~G~~~~a~llr~~ 280 (311)
..|+.++++||||++||+|+.|++++++++++ +||++++++||+|++|++++|||.
T Consensus 331 ~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 331 ECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred HHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhhh
Confidence 76778999999999999999999999888876 699999999999999999999984
No 11
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.5e-42 Score=329.70 Aligned_cols=261 Identities=48% Similarity=0.740 Sum_probs=212.3
Q ss_pred CchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHH
Q 041111 15 PADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGL 94 (311)
Q Consensus 15 ~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~ 94 (311)
+..++|.+.+.++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||++++++++++++++|+|++
T Consensus 72 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~ 151 (361)
T cd00831 72 PSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGA 151 (361)
T ss_pred CCcCcchhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHH
Confidence 45668899999999999999999999999999999999999987778899999999999999867899999856999999
Q ss_pred HHHHHHHHHHhCCCCCeEEEEEeecccccCccCCC-ccchhhheecccceEEEEEecCCCCCC--CCccceeeeeecccC
Q 041111 95 ISIDLAKQLLQLPPNSCALVVSTENITMNWYAGND-RSMLLTNCLFRLGGAAILLSNRSSDRR--RSKYELVHTLRTHKG 171 (311)
Q Consensus 95 ~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~d-r~~~~~~~l~GDGAaA~vLs~~~~~~~--~~~~~l~~~~~~~~~ 171 (311)
.||++|.+++++|+.+++|||++|.+|..++ +.| +...++.++|||||+|+||++.+.... ...+++.+.....++
T Consensus 152 ~al~~A~~~~~~~~~~~aLvv~~e~~s~~~~-~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p 230 (361)
T cd00831 152 IALDLAKDLLEANPGARVLVVSTELCSLWYR-GPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP 230 (361)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEeecccceeC-CCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee
Confidence 9999999999999999999999999986332 244 554556789999999999998765321 112333322111111
Q ss_pred -----------CCCcc--hHH-----------HHHHHhhccch--hhHHHhhhhhhccCCChHHHHHHHHHcCCCccccc
Q 041111 172 -----------GDDRS--FGR-----------KIFKMKIKPYI--PNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVME 225 (311)
Q Consensus 172 -----------~~~~~--~g~-----------~~~~~a~~~~~--~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~ 225 (311)
..... +++ +.++..++. . +...+|||+|++||+|+++++.+++.||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~-~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~ 309 (361)
T cd00831 231 DSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLAR-LGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLE 309 (361)
T ss_pred cCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhcc-ccCCCccccceEEEECCCChHHHHHHHHHcCCCHHHHH
Confidence 00000 011 222333333 3 33457999999999999999999999999999987
Q ss_pred hhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhhee
Q 041111 226 PSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVW 277 (311)
Q Consensus 226 ~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ll 277 (311)
.|+.++++||||++||+|++|++++++|++++||++++++||+|++|++++|
T Consensus 310 ~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 310 ASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 6778999999999999999999999999999999999999999999999875
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=6.4e-42 Score=327.47 Aligned_cols=266 Identities=22% Similarity=0.265 Sum_probs=210.1
Q ss_pred CchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcc-eeeecCCccchH
Q 041111 15 PADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNIL-SYNFGGVGCSAG 93 (311)
Q Consensus 15 ~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~-~~~i~~~~Cas~ 93 (311)
|++.+|+..+.+...+|+.+|+++||+++|++++|||+||++|++....|+.+.+|+++||+++.+. .++++ .||+|+
T Consensus 89 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~ 167 (391)
T PLN03173 89 PSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAG 167 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHH
Confidence 5678999999999999999999999999999999999999998655558999999999999986553 55667 799999
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCc--cchhhheecccceEEEEEecCCCCC-CCCccceeeeeeccc
Q 041111 94 LISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDR--SMLLTNCLFRLGGAAILLSNRSSDR-RRSKYELVHTLRTHK 170 (311)
Q Consensus 94 ~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr--~~~~~~~l~GDGAaA~vLs~~~~~~-~~~~~~l~~~~~~~~ 170 (311)
+.+|++|.+++++++.++||||++|.+|..|+.+.|+ .++++..+|||||+|+||++.+... ....|++.+..+..+
T Consensus 168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~ 247 (391)
T PLN03173 168 GTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTIL 247 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEe
Confidence 9999999999999999999999999999656443443 3345689999999999999854321 112356554322111
Q ss_pred CC-----------CC--cchHHHHHHHhhcc-------chhh---HHHhhhhhhccCCChHHHHHHHHHcCCCccccchh
Q 041111 171 GG-----------DD--RSFGRKIFKMKIKP-------YIPN---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPS 227 (311)
Q Consensus 171 ~~-----------~~--~~~g~~~~~~a~~~-------~~~~---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s 227 (311)
+. .+ ..+.+++++.+.+. ++.. ..+|||+|++||+|+++++.+++.||++++++..|
T Consensus 248 ~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s 327 (391)
T PLN03173 248 PDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRAT 327 (391)
T ss_pred cCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHH
Confidence 10 11 11124444433222 1111 14789999999999999999999999999999877
Q ss_pred HhhHhhcCCcchhhHHHHHHHHHHh----CCCCC--C-CeEEEEeechhHHHhhheeeEec
Q 041111 228 RMTLYRFGNTSSSCLWYKLAYFEAK----RRIRK--G-DRTWQIAFGSGFKCNSAVWRALR 281 (311)
Q Consensus 228 ~~~~~~~Gn~~sas~~~~L~~~~~~----g~l~~--G-d~vll~~~G~G~~~~a~llr~~~ 281 (311)
+.++++||||+|||+|+.|++++++ +.+++ | +++++++||+|++++++++||..
T Consensus 328 ~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 328 RHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA 388 (391)
T ss_pred HHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence 8899999999999999999999963 44433 3 88999999999999999999944
No 13
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=6.2e-42 Score=328.74 Aligned_cols=265 Identities=22% Similarity=0.287 Sum_probs=212.1
Q ss_pred CCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceeeecCCccch
Q 041111 14 KPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI-LSYNFGGVGCSA 92 (311)
Q Consensus 14 ~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~i~~~~Cas 92 (311)
.|++.+|+..+.+...+|+.+|+++||+++|++++|||+||++|++....|+.+.+|+++||+++.+ .+++++ .||+|
T Consensus 92 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G 170 (401)
T PLN03170 92 APSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFA 170 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHH
Confidence 3567899999999999999999999999999999999999988765556999999999999998654 378999 79999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCC--ccchhhheecccceEEEEEecCCCCC-CCCccceeeeeecc
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGND--RSMLLTNCLFRLGGAAILLSNRSSDR-RRSKYELVHTLRTH 169 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~d--r~~~~~~~l~GDGAaA~vLs~~~~~~-~~~~~~l~~~~~~~ 169 (311)
++.+|++|..++++++.++||||++|.+|..|+.+.+ .++.++..+|||||+|+||++.+... ....+++.+.....
T Consensus 171 ~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~ 250 (401)
T PLN03170 171 GGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTI 250 (401)
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceE
Confidence 9999999999999999999999999999976643222 22345678999999999999865431 11234554321111
Q ss_pred cC-------C----CCc--chHHHHHHHhhcc-------chhh---HHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 170 KG-------G----DDR--SFGRKIFKMKIKP-------YIPN---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 170 ~~-------~----~~~--~~g~~~~~~a~~~-------~~~~---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
++ . .+. .+.+++++.+.+. ++.. ..+|+++|++||+|+++++.+++.||++++++..
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~ 330 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRA 330 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHH
Confidence 11 0 111 1134444332222 1111 1468999999999999999999999999999977
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHH----HhCCCCCC---CeEEEEeechhHHHhhheeeE
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFE----AKRRIRKG---DRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~----~~g~l~~G---d~vll~~~G~G~~~~a~llr~ 279 (311)
|+.++++||||+|+++|+.|++++ ++|++++| |++++++||+|++|++++|||
T Consensus 331 s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 331 TRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 789999999999999999999997 46888888 899999999999999999999
No 14
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=2.8e-42 Score=329.91 Aligned_cols=269 Identities=20% Similarity=0.322 Sum_probs=211.8
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPM 63 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~ 63 (311)
|.+.|+|++.+++.+. +|+....+++..+|+.+|+++||+++|++++|||.||++++.....
T Consensus 52 g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~ 131 (379)
T PLN02326 52 GCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL 131 (379)
T ss_pred EEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc
Confidence 5678999998876642 2455556889999999999999999999999999999987633223
Q ss_pred CcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccce
Q 041111 64 PSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGG 143 (311)
Q Consensus 64 p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGA 143 (311)
+..+..+++.||++ ++++++++ .+|+|++.||.+|.++|++|..+++|||++|.++..+ .+.|+. +..+|||||
T Consensus 132 ~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~-~~~d~~---~~~lfGDGA 205 (379)
T PLN02326 132 FGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV-DWTDRG---TCILFGDGA 205 (379)
T ss_pred CcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC-CccccC---ceEEEccee
Confidence 45688999999998 78999999 6999999999999999999999999999999988422 224554 357999999
Q ss_pred EEEEEecCCCCC-CCCccceeee------eecc-cCC-----------------CCcch------HHHHHHHhhcc----
Q 041111 144 AAILLSNRSSDR-RRSKYELVHT------LRTH-KGG-----------------DDRSF------GRKIFKMKIKP---- 188 (311)
Q Consensus 144 aA~vLs~~~~~~-~~~~~~l~~~------~~~~-~~~-----------------~~~~~------g~~~~~~a~~~---- 188 (311)
+|+||++.+... ....+++... .... .+. ....| |+++|+.+++.
T Consensus 206 aAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 285 (379)
T PLN02326 206 GAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQV 285 (379)
T ss_pred EEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHH
Confidence 999999876431 1111111110 0000 000 00011 56666654433
Q ss_pred ---chhh---HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEE
Q 041111 189 ---YIPN---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTW 262 (311)
Q Consensus 189 ---~~~~---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vl 262 (311)
++.+ ..+|||+|++||+|.++++.+++.||+++||+ ..++++||||++||+|++|++++++|++++||+||
T Consensus 286 i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vl 362 (379)
T PLN02326 286 IESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIA 362 (379)
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 1111 15799999999999999999999999999998 57889999999999999999999999999999999
Q ss_pred EEeechhHHHhhheeeE
Q 041111 263 QIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 263 l~~~G~G~~~~a~llr~ 279 (311)
+++||+|++|++++|+|
T Consensus 363 l~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 363 TAGFGAGLTWGSAIVRW 379 (379)
T ss_pred EEEEChhheeeEEEEEC
Confidence 99999999999999987
No 15
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.4e-42 Score=320.99 Aligned_cols=269 Identities=14% Similarity=0.222 Sum_probs=210.6
Q ss_pred CCcccccCcccCCCchh------------------hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPADK------------------KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~~------------------~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+.+.|+|++.+++.+.. ||+.. +++..+|+.+|++++|+++|++++|||.||++++ +++.
T Consensus 9 ~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~ 87 (329)
T PRK07204 9 GIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA 87 (329)
T ss_pred EEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC
Confidence 45789999988865421 33333 6889999999999999999999999999999874 5667
Q ss_pred CCcHHHHHHHHcCCCC-CcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheeccc
Q 041111 63 MPSLSAMVVNHYKLRG-NILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRL 141 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~-~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GD 141 (311)
.|+.+.+|+++||+++ .+++++++ .+|+|++.||.+|.+++++|..+++|||++|.++..+. ..++. +.++|||
T Consensus 88 ~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~~-~~~~~---~~~lfGD 162 (329)
T PRK07204 88 IPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRYKRVLIISSEISSVGLN-WGQNE---SCILFGD 162 (329)
T ss_pred CccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCCC-cccCc---ceEEEec
Confidence 8999999999999985 37999999 69999999999999999999999999999999874322 12333 3689999
Q ss_pred ceEEEEEecCCCCCCCCccceeeee------e-----cccC------CCCcc--h---HHHHHHHhh-------ccchh-
Q 041111 142 GGAAILLSNRSSDRRRSKYELVHTL------R-----THKG------GDDRS--F---GRKIFKMKI-------KPYIP- 191 (311)
Q Consensus 142 GAaA~vLs~~~~~~~~~~~~l~~~~------~-----~~~~------~~~~~--~---g~~~~~~a~-------~~~~~- 191 (311)
||+|+||++.+.........+.... . ...+ ..... + ++++++.+. +.++.
T Consensus 163 GAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 242 (329)
T PRK07204 163 GAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMD 242 (329)
T ss_pred ccEEEEEEEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987653211111110000 0 0000 00001 1 344443322 22222
Q ss_pred --hHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechh
Q 041111 192 --NFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSG 269 (311)
Q Consensus 192 --~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G 269 (311)
..++|||+|++||+|.++++.+++.|++|+|++ ..++++||||+++|+|++|++++++|++++||+|+++++|+|
T Consensus 243 ~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G 319 (329)
T PRK07204 243 AGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAG 319 (329)
T ss_pred cCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchh
Confidence 236899999999999999999999999999998 689999999999999999999999999999999999999999
Q ss_pred HHHhhheeeE
Q 041111 270 FKCNSAVWRA 279 (311)
Q Consensus 270 ~~~~a~llr~ 279 (311)
++|++++|||
T Consensus 320 ~s~~~~ll~~ 329 (329)
T PRK07204 320 LSIGGILLEY 329 (329)
T ss_pred hhheeeEEeC
Confidence 9999999986
No 16
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=6.2e-42 Score=321.33 Aligned_cols=268 Identities=16% Similarity=0.252 Sum_probs=210.2
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|.+.|+|++.+++... +|+....+++..+|+.+|+++||+++|++|+|||.||++++ +++.
T Consensus 7 ~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~ 86 (326)
T CHL00203 7 STGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL 86 (326)
T ss_pred EEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC
Confidence 5678999998887642 14445567889999999999999999999999999999874 4433
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
+..+..+++.||+. ++++++++ .+|+|++.||.+|.++|++|..+++|||++|.++..+. +.++. +..+||||
T Consensus 87 -~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~-~~~~~---~~~~fgDg 159 (326)
T CHL00203 87 -FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKNILVVGADTLSKWID-WSDRK---TCILFGDG 159 (326)
T ss_pred -CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCC-cccCC---ceEEEcce
Confidence 34567899999998 68899999 69999999999999999999999999999999984332 23443 36899999
Q ss_pred eEEEEEecCCCCCCCCcccee---------eeeec---c--cC-----CCCcc---h-HHHHHHHhhcc-------chhh
Q 041111 143 GAAILLSNRSSDRRRSKYELV---------HTLRT---H--KG-----GDDRS---F-GRKIFKMKIKP-------YIPN 192 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~---------~~~~~---~--~~-----~~~~~---~-g~~~~~~a~~~-------~~~~ 192 (311)
|+|+||++.+.. ....+.+. ..... . ++ ..... + ++++|+.+++. ++.+
T Consensus 160 a~A~ll~~~~~~-~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~ 238 (326)
T CHL00203 160 AGAAIIGASYEN-SILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNA 238 (326)
T ss_pred eeEEEEEEcCCC-CeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999986542 11111111 00000 0 01 00110 1 55555544332 1111
Q ss_pred ---HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechh
Q 041111 193 ---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSG 269 (311)
Q Consensus 193 ---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G 269 (311)
..+|||+|++||+|.++++.+++.||+|+||+ ..++++|||+++|++|++|++++++|++++||+++++++|+|
T Consensus 239 ~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G 315 (326)
T CHL00203 239 LNISIDEVDWFILHQANKRILEAIANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAG 315 (326)
T ss_pred cCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchh
Confidence 26899999999999999999999999999998 689999999999999999999999999999999999999999
Q ss_pred HHHhhheeeEe
Q 041111 270 FKCNSAVWRAL 280 (311)
Q Consensus 270 ~~~~a~llr~~ 280 (311)
++|+++++||.
T Consensus 316 ~s~~~~v~~~~ 326 (326)
T CHL00203 316 LTWGAIVLKWK 326 (326)
T ss_pred hhheEEEEEeC
Confidence 99999999984
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.6e-42 Score=325.24 Aligned_cols=271 Identities=17% Similarity=0.229 Sum_probs=213.0
Q ss_pred CCcccccCcccCCCch----------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-
Q 041111 2 GNMAYVAKAMLDKPAD----------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS- 58 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~- 58 (311)
|.+.|+|++.+++.+. .||+...+++..+|+.+|+++||+++|++++|||.||++|+
T Consensus 12 ~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t 91 (353)
T PRK12880 12 GICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQS 91 (353)
T ss_pred EEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 5678999998886531 13444457889999999999999999999999999999975
Q ss_pred CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhhee
Q 041111 59 LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCL 138 (311)
Q Consensus 59 ~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l 138 (311)
+++..|+.+.+|+++||+++++.+|+++ .+|+|++.||++|..++++|+.+ +|||++|.+|..+. +.|+. ...+
T Consensus 92 ~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~~-~~d~~---~~~l 165 (353)
T PRK12880 92 PDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFIH-PKNMN---LAPI 165 (353)
T ss_pred CCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccCC-cccCC---ceee
Confidence 6899999999999999998788999998 69999999999999999999988 99999999985332 24554 3689
Q ss_pred cccceEEEEEecCCCCCCCCccceeee------ee-----cccC-C----C----------Ccc---h-HHHHHHHhhcc
Q 041111 139 FRLGGAAILLSNRSSDRRRSKYELVHT------LR-----THKG-G----D----------DRS---F-GRKIFKMKIKP 188 (311)
Q Consensus 139 ~GDGAaA~vLs~~~~~~~~~~~~l~~~------~~-----~~~~-~----~----------~~~---~-g~~~~~~a~~~ 188 (311)
|||||+|+||++.+.... .+++... .. ...+ . + ... . |+++|+.+++.
T Consensus 166 FGDGAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~ 243 (353)
T PRK12880 166 FGDGVSATLIEKTDFNEA--FFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALEC 243 (353)
T ss_pred ecccceEEEEEecCCCCc--eEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHH
Confidence 999999999997653211 1111110 00 0000 0 0 000 1 57777666543
Q ss_pred chhh-----------HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCC
Q 041111 189 YIPN-----------FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRK 257 (311)
Q Consensus 189 ~~~~-----------~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~ 257 (311)
++. ..+|||+|++||+|+++++.+.+.||+++||+. ..++++|||+++||+|+.|++++++++++
T Consensus 244 -~~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~- 319 (353)
T PRK12880 244 -EPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK- 319 (353)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE-
Confidence 222 157999999999999999999999999999982 35689999999999999999999888764
Q ss_pred CCeEEEEeechhHHHhhheeeEeccC-CCCC
Q 041111 258 GDRTWQIAFGSGFKCNSAVWRALRTI-NPAH 287 (311)
Q Consensus 258 Gd~vll~~~G~G~~~~a~llr~~~~~-~~~~ 287 (311)
+++++||+|++|+++++||++=. ||-+
T Consensus 320 ---~ll~~~G~G~s~g~~ll~~~~~~~~~~~ 347 (353)
T PRK12880 320 ---ASLSAFGAGLSWGSAVLNFKDLYTKDIL 347 (353)
T ss_pred ---EEEEEEchhhhheEeEEEECCcCCCceE
Confidence 99999999999999999995544 4443
No 18
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=322.49 Aligned_cols=267 Identities=22% Similarity=0.281 Sum_probs=207.1
Q ss_pred CCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcc-eeeecCCccc
Q 041111 13 DKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNIL-SYNFGGVGCS 91 (311)
Q Consensus 13 ~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~-~~~i~~~~Ca 91 (311)
..|++.+|+..+.++..+|+++|+++||+++|++++|||+||++|++.+..|+.+.+++++||+++.+. .+++. +||+
T Consensus 93 ~~~~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~ 171 (399)
T PLN03171 93 DAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCF 171 (399)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccH
Confidence 345678999999999999999999999999999999999999997644458999999999999985432 56666 6999
Q ss_pred hHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCc---cchhhheecccceEEEEEecCCCCCCCCccceeeeeec
Q 041111 92 AGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDR---SMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRT 168 (311)
Q Consensus 92 s~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr---~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~~~ 168 (311)
|++.+|++|.+++++|+.++||||++|.+|..+.. .|+ .+.++..+|||||+|+||++.++......+++.+....
T Consensus 172 g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~~~-~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~ 250 (399)
T PLN03171 172 AGAAALRLAKDLAENNRGARVLVVAAEITLLLFNG-PDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA 250 (399)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEeccccccCC-CCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE
Confidence 99999999999999999999999999999864432 233 23445789999999999998764321122344432211
Q ss_pred ccC-----------CCC--cch----HHHHHHHhhccchhh------------HHHhhhhhhccCCChHHHHHHHHHcCC
Q 041111 169 HKG-----------GDD--RSF----GRKIFKMKIKPYIPN------------FKLAFEHICIRTGGRAVLDEVEKHLKL 219 (311)
Q Consensus 169 ~~~-----------~~~--~~~----g~~~~~~a~~~~~~~------------~~~did~v~~h~~s~~~~~~~~~~lgi 219 (311)
..+ ... ..+ -.+.++..++..+.. ..+|++|+ +||+|.++++.+.+.||+
T Consensus 251 ~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lgl 329 (399)
T PLN03171 251 IIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALGL 329 (399)
T ss_pred EecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcCC
Confidence 111 100 011 112222222222221 24678776 699999999999999999
Q ss_pred CccccchhHhhHhhcCCcchhhHHHHHHHHHHhCC--CCCC---CeEEEEeechhHHHhhheeeEecc
Q 041111 220 NEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRR--IRKG---DRTWQIAFGSGFKCNSAVWRALRT 282 (311)
Q Consensus 220 ~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~--l~~G---d~vll~~~G~G~~~~a~llr~~~~ 282 (311)
+++|+..|+.++++||||++||+|+.|++++++++ +++| |++++++||+|++|++++|||.+.
T Consensus 330 ~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~~ 397 (399)
T PLN03171 330 EPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGH 397 (399)
T ss_pred CHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHHHHHhhcccC
Confidence 99999766789999999999999999999998874 6788 999999999999999999999654
No 19
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-41 Score=317.66 Aligned_cols=270 Identities=20% Similarity=0.311 Sum_probs=213.6
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+.+.|+|++.+++.+. +|++...+++..+|+.+|+++||+++|+++++||.||++++ +++.
T Consensus 9 ~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~ 88 (325)
T PRK12879 9 GIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL 88 (325)
T ss_pred EEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC
Confidence 5678999998887642 15555567889999999999999999999999999998875 5777
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+.++++.||++ +++.++++ .+|+|++.||.+|.++|++|..+++|||++|.++..+ ...++. ...+||||
T Consensus 89 ~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~-~~~~~~---~~~~~GDg 162 (325)
T PRK12879 89 FPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT-DYTDRT---TCILFGDG 162 (325)
T ss_pred CChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-CccccC---ceEEEeec
Confidence 899999999999998 58999999 6999999999999999999999999999999987432 123443 36899999
Q ss_pred eEEEEEecCCCCCCCCccceee------eeec-ccC----CC---Ccch----HHHHHHHhhc-------cchhh---HH
Q 041111 143 GAAILLSNRSSDRRRSKYELVH------TLRT-HKG----GD---DRSF----GRKIFKMKIK-------PYIPN---FK 194 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~------~~~~-~~~----~~---~~~~----g~~~~~~a~~-------~~~~~---~~ 194 (311)
|+|+||++.+...+.....+.. .... ..+ .+ ...+ ++++++.+++ +++.+ ..
T Consensus 163 AaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 242 (325)
T PRK12879 163 AGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK 242 (325)
T ss_pred ceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999977532211111100 0000 000 00 0001 4444443322 22222 26
Q ss_pred HhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhh
Q 041111 195 LAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNS 274 (311)
Q Consensus 195 ~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a 274 (311)
+|||+|++||+|.++++.+++.+|++++++ ..++++|||++++|+|++|++++++|++++||+++++++|+|++|++
T Consensus 243 ~did~~~~h~~~~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~ 319 (325)
T PRK12879 243 DDIDWVIPHQANLRIIESLCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAA 319 (325)
T ss_pred HHCCEEEECCCCHHHHHHHHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEE
Confidence 899999999999999999999999999998 46899999999999999999999999999999999999999999999
Q ss_pred heeeEe
Q 041111 275 AVWRAL 280 (311)
Q Consensus 275 ~llr~~ 280 (311)
+++||+
T Consensus 320 ~l~~~~ 325 (325)
T PRK12879 320 LLVKWG 325 (325)
T ss_pred EEEEeC
Confidence 999994
No 20
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.6e-41 Score=315.54 Aligned_cols=272 Identities=19% Similarity=0.200 Sum_probs=210.8
Q ss_pred CCcccccCcccCCCchh-------------------------hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 2 GNMAYVAKAMLDKPADK-------------------------KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
|.+.|+|++.+++.+.. |++...+++..+|+.+|+++||+++|+++++||.||++
T Consensus 10 ~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ 89 (338)
T PRK09258 10 SLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINT 89 (338)
T ss_pred EEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 56789999987754321 23333467899999999999999999999999999998
Q ss_pred ec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccC-----CCc
Q 041111 57 SS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAG-----NDR 130 (311)
Q Consensus 57 s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~-----~dr 130 (311)
++ +++..|+.+..++++||+++++++++++ .+|+|++.||.+|.++|++|..+++||+++|.++..+... .+.
T Consensus 90 s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~ 168 (338)
T PRK09258 90 SVCRDYLEPATACRVHHNLGLPKSCANFDVS-NACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEATIDRLLAPE 168 (338)
T ss_pred cCCCCCCCChHHHHHHHHcCCCCCCceeehh-hhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhccchhhhhccCc
Confidence 75 6788899999999999998668999999 5999999999999999999999999999999987422110 111
Q ss_pred c------chhhheecccceEEEEEecCCCCCCCCccceeeeeecccC-------CCCcch---HHHHHHHhhcc------
Q 041111 131 S------MLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTHKG-------GDDRSF---GRKIFKMKIKP------ 188 (311)
Q Consensus 131 ~------~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~---g~~~~~~a~~~------ 188 (311)
. ..+...+|||||+|+||++.+.... .+++.+......+ .....+ ++.+++..++.
T Consensus 169 ~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (338)
T PRK09258 169 TTREDFAQSFATLTLGSGAAAAVLTRGSLHPR--GHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWE 246 (338)
T ss_pred cchhhhhhccceEEecccceEEEEecCCCCCC--cceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHH
Confidence 1 1123578999999999998754221 2333332111000 001111 33333332221
Q ss_pred -chh---hHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEE
Q 041111 189 -YIP---NFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQI 264 (311)
Q Consensus 189 -~~~---~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~ 264 (311)
+++ ...+|||+|++||+|.++++.+++.+|+|++|+ ..++++||||+++|+|++|++++++|++++||+++++
T Consensus 247 ~~L~~~g~~~~did~~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~ 323 (338)
T PRK09258 247 AFLAQLGWAVEQVDRVICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALL 323 (338)
T ss_pred HHHHHcCCCHHHCCEEecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEE
Confidence 122 225899999999999999999999999999999 5688999999999999999999999999999999999
Q ss_pred eechhHHHhhheeeE
Q 041111 265 AFGSGFKCNSAVWRA 279 (311)
Q Consensus 265 ~~G~G~~~~a~llr~ 279 (311)
++|+|++++++++||
T Consensus 324 ~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 324 GIGSGLNCSMLEVKW 338 (338)
T ss_pred EechhHhhHhHeeeC
Confidence 999999999999997
No 21
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.7e-40 Score=310.22 Aligned_cols=269 Identities=20% Similarity=0.335 Sum_probs=212.0
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+++.|+|++.++++.. +|++...+++..+|+.+|++++|+++|+++++||.|+++++ +++.
T Consensus 7 ~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~ 86 (318)
T TIGR00747 7 GTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA 86 (318)
T ss_pred EEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC
Confidence 4578899988766532 24555567899999999999999999999999999999875 5667
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+.++++.+|++ +++.++++ .+|+|++.||++|.++|++|..+++||+++|.++..+. +.++. ...+||||
T Consensus 87 ~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~~-~~~~~---~~~~~GDG 160 (318)
T TIGR00747 87 FPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLD-WTDRG---TCVLFGDG 160 (318)
T ss_pred CChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCC-cCCCC---eEEEEecc
Confidence 888899999999998 58999998 69999999999999999999999999999999874221 23443 25789999
Q ss_pred eEEEEEecCCCCCCCCccceeeee------ecccC----CCCcch----HHHHHHHhhc-------cchhh---HHHhhh
Q 041111 143 GAAILLSNRSSDRRRSKYELVHTL------RTHKG----GDDRSF----GRKIFKMKIK-------PYIPN---FKLAFE 198 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~~~------~~~~~----~~~~~~----g~~~~~~a~~-------~~~~~---~~~did 198 (311)
|+|+||++.+...+...+++.... ..+.+ .+...| +++.++..++ .++++ ..+|||
T Consensus 161 AaA~lL~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~ 240 (318)
T TIGR00747 161 AGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDID 240 (318)
T ss_pred eeEEEEeecCCCCcEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 999999997754321111111100 00000 011111 3444433322 22222 258999
Q ss_pred hhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 199 HICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 199 ~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
+|++||++.++++.+++.||+|+||+ ..++++||||++||+|++|++++++|++++||+|+++++|+|++|+++++|
T Consensus 241 ~~~~h~~~~~~~~~~~~~lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 241 WFVPHQANLRIIEALAKRLELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred EEEECCCCHHHHHHHHHHcCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEE
Confidence 99999999999999999999999999 578999999999999999999999999999999999999999999999999
Q ss_pred E
Q 041111 279 A 279 (311)
Q Consensus 279 ~ 279 (311)
|
T Consensus 318 ~ 318 (318)
T TIGR00747 318 F 318 (318)
T ss_pred C
Confidence 7
No 22
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=8.2e-40 Score=308.37 Aligned_cols=272 Identities=19% Similarity=0.226 Sum_probs=206.8
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec--CCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS--LFN 61 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~--~~~ 61 (311)
+.+.|+|.+.+++.+. .||++..+++..+|+.+|++++|+++|++|+|||.||++++ +++
T Consensus 9 ~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~ 88 (339)
T PRK06840 9 GTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDY 88 (339)
T ss_pred EEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC
Confidence 5678999998887642 14555567899999999999999999999999999997753 467
Q ss_pred CCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhC-CCCCeEEEEEeecccccCccCCCccchhhheecc
Q 041111 62 PMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQL-PPNSCALVVSTENITMNWYAGNDRSMLLTNCLFR 140 (311)
Q Consensus 62 ~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~a-g~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~G 140 (311)
..|+.+.++++++|++ +++++++. .+|+|++.||.+|.++|++ |..+++|||++|..+.... ..++... ..++||
T Consensus 89 ~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~~-~~~~~~~-~~~~~G 164 (339)
T PRK06840 89 PVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLVD-YDNPRTR-FMFNFA 164 (339)
T ss_pred CCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccccC-cCCCCee-eeccCC
Confidence 7888899999999997 68999999 6999999999999999999 8889999999999874221 1222210 013479
Q ss_pred cceEEEEEecCCCCCCCCccceee------eeecccCC----------C-Ccch----HHHHHH------------Hhhc
Q 041111 141 LGGAAILLSNRSSDRRRSKYELVH------TLRTHKGG----------D-DRSF----GRKIFK------------MKIK 187 (311)
Q Consensus 141 DGAaA~vLs~~~~~~~~~~~~l~~------~~~~~~~~----------~-~~~~----g~~~~~------------~a~~ 187 (311)
|||+|+||++.+.........+.. ....+.+. + +..+ ++..++ .+++
T Consensus 165 DgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (339)
T PRK06840 165 AGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIR 244 (339)
T ss_pred CceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHH
Confidence 999999999876532111000000 00000000 0 0000 122222 2222
Q ss_pred cchhh---HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEE
Q 041111 188 PYIPN---FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQI 264 (311)
Q Consensus 188 ~~~~~---~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~ 264 (311)
.++.+ ..+|||+|++||.|.++++.+++.||++++++ . ++++||||+++|+|++|+++++++++++||+++++
T Consensus 245 ~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~ 320 (339)
T PRK06840 245 EALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLV 320 (339)
T ss_pred HHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 22222 26899999999999999999999999999997 2 58999999999999999999999999999999999
Q ss_pred eechhHHHhhheeeEec
Q 041111 265 AFGSGFKCNSAVWRALR 281 (311)
Q Consensus 265 ~~G~G~~~~a~llr~~~ 281 (311)
++|+|++|+++++||++
T Consensus 321 ~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 321 SAGTGYTWAATVIRWGP 337 (339)
T ss_pred EEehhhheeEEEEEecC
Confidence 99999999999999963
No 23
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.8e-40 Score=312.39 Aligned_cols=270 Identities=17% Similarity=0.203 Sum_probs=209.3
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|.+.|+|.+.+++... +||++..+++..+|+.+|+++||+++|++++|||.||++++ +++.
T Consensus 6 g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~ 85 (345)
T TIGR00748 6 GYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA 85 (345)
T ss_pred EEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc
Confidence 5788999988876532 25556568999999999999999999999999999998875 6677
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|..+..+++.||+.++++.+++. .+|+|++.||.+|..+|++|..+++|||++|.++.. +.|+. ...||||
T Consensus 86 ~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~---~~~~~----~~~~GDG 157 (345)
T TIGR00748 86 VKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGA---PGDAL----EYTAGAG 157 (345)
T ss_pred ccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC---CCccC----cccCCCc
Confidence 788899999999997678999999 699999999999999999999999999999998732 23443 3568999
Q ss_pred eEEEEEecCCCCCCC-Ccccee----eeeec---ccCCCCcch-H-HHHHHHhhc---cchhh---HHHhhhhhhccCCC
Q 041111 143 GAAILLSNRSSDRRR-SKYELV----HTLRT---HKGGDDRSF-G-RKIFKMKIK---PYIPN---FKLAFEHICIRTGG 206 (311)
Q Consensus 143 AaA~vLs~~~~~~~~-~~~~l~----~~~~~---~~~~~~~~~-g-~~~~~~a~~---~~~~~---~~~did~v~~h~~s 206 (311)
|+|+||++.+..... ..+... +.++. .++.....+ + .++++.+.+ .++.+ ..+|||+|++||+|
T Consensus 158 AaA~vl~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~ 237 (345)
T TIGR00748 158 GAAYIIGEKNTVAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN 237 (345)
T ss_pred eEEEEEccCCcceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC
Confidence 999999976532110 001000 00000 001001111 1 344444332 22222 26899999999999
Q ss_pred hHHHHHHHHHcCCCccccchhHhh--HhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeEeccCC
Q 041111 207 RAVLDEVEKHLKLNEWVMEPSRMT--LYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRALRTIN 284 (311)
Q Consensus 207 ~~~~~~~~~~lgi~~d~~~~s~~~--~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~ 284 (311)
.++++.+.+.+|+++||+. .+ .++||||++||+|++|+++++ ++++||+|++++||+|++|+++++||++...
T Consensus 238 ~~~~~~~~~~lgl~~ek~~---~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~ 312 (345)
T TIGR00748 238 GKFYLVAARMLGFPKEQVK---PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIE 312 (345)
T ss_pred hHHHHHHHHHcCCCHHHee---ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHH
Confidence 9999999999999999984 43 389999999999999999986 6899999999999999999999999976653
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.4e-39 Score=303.76 Aligned_cols=267 Identities=22% Similarity=0.348 Sum_probs=209.0
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+.+.|+|++.+++.+. +|+++..+++..+|+.+|++++|+++|+++++||.||++++ +++.
T Consensus 6 ~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~ 85 (320)
T cd00830 6 GIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL 85 (320)
T ss_pred EEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC
Confidence 4678899987766542 15555566899999999999999999999999999998875 5556
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+.++++.+|++ +++.++++ .+|+|++.||.+|.++|++|+.+++||+++|.++..+. ..++. ..++||||
T Consensus 86 ~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~-~~~~~---~~~~~GDg 159 (320)
T cd00830 86 FPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILD-WTDRS---TAVLFGDG 159 (320)
T ss_pred CCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccccC-cccCC---ceEEEecc
Confidence 889999999999998 78999999 69999999999999999999999999999999884332 12332 36899999
Q ss_pred eEEEEEecCCCCCCCCccceeeee------ecccCC---------CCcch----HHHHHHHhh-------ccchhh---H
Q 041111 143 GAAILLSNRSSDRRRSKYELVHTL------RTHKGG---------DDRSF----GRKIFKMKI-------KPYIPN---F 193 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~~~------~~~~~~---------~~~~~----g~~~~~~a~-------~~~~~~---~ 193 (311)
|+|+||++.+.............. ..+.+. ....+ ++.+++... +.++.+ .
T Consensus 160 AaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~ 239 (320)
T cd00830 160 AGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLT 239 (320)
T ss_pred ceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCC
Confidence 999999997653221111111100 011110 00001 333333222 222222 2
Q ss_pred HHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHh
Q 041111 194 KLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCN 273 (311)
Q Consensus 194 ~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~ 273 (311)
.+|||+|++||++.++++.+++.+|+++|++ ..++++|||++++|+|++|++++++|++++||+++++++|+|++|+
T Consensus 240 ~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~ 316 (320)
T cd00830 240 PDDIDWFVPHQANLRIIEAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWG 316 (320)
T ss_pred HHHCCEEEECCCCHHHHHHHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhH
Confidence 6899999999999999999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred hhee
Q 041111 274 SAVW 277 (311)
Q Consensus 274 a~ll 277 (311)
++++
T Consensus 317 ~~l~ 320 (320)
T cd00830 317 AALL 320 (320)
T ss_pred HhhC
Confidence 9875
No 25
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=308.06 Aligned_cols=269 Identities=19% Similarity=0.250 Sum_probs=208.5
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|.+.|+|++.+++... +||++..+++..+|+.+|+++||+++|++++|||.||++++ +++.
T Consensus 7 ~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~ 86 (347)
T PRK04262 7 GYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA 86 (347)
T ss_pred EEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc
Confidence 5678999998887642 25556578899999999999999999999999999998875 5667
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|..+.+++++||+++++++++++ .+|+|++.+|.+|.++|++|+.+++|||++|....+ +.++. ...+|||
T Consensus 87 ~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~~---~~~~~----~~~~GDG 158 (347)
T PRK04262 87 VKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGA---PGDAL----EYTAAAG 158 (347)
T ss_pred cccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeeccC---CCCCC----CCcCCCC
Confidence 888889999999998668899999 699999999999999999999999999999984321 23433 2457999
Q ss_pred eEEEEEecCCCCCCCCccceeeee--ec----cc-------CCCCcch-H-HHHHH---Hhhccchhh---HHHhhhhhh
Q 041111 143 GAAILLSNRSSDRRRSKYELVHTL--RT----HK-------GGDDRSF-G-RKIFK---MKIKPYIPN---FKLAFEHIC 201 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~~~--~~----~~-------~~~~~~~-g-~~~~~---~a~~~~~~~---~~~did~v~ 201 (311)
|+|+||++.+.. .++.+.. .. .+ +.....+ + ...++ ..++.++.+ ..+|||+|+
T Consensus 159 A~A~ll~~~~~~-----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v 233 (347)
T PRK04262 159 GAAFIIGKEEVI-----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAV 233 (347)
T ss_pred cEEEEEecCccc-----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceee
Confidence 999999975431 2222210 00 00 0000111 1 12222 222222222 368999999
Q ss_pred ccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeEec
Q 041111 202 IRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRALR 281 (311)
Q Consensus 202 ~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 281 (311)
+||+|.++++.+++.||+|++|+..+. ++++||||++||+|++|+++++ ++++||++|++++|+|++++++++||++
T Consensus 234 ~Hq~n~~~~~~~~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 234 FHQPNGKFPLRVAKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred cCCCchHHHHHHHHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEech
Confidence 999999999999999999999984211 5799999999999999999997 4899999999999999999999999987
Q ss_pred cCCCC
Q 041111 282 TINPA 286 (311)
Q Consensus 282 ~~~~~ 286 (311)
.+..+
T Consensus 311 ~~~~~ 315 (347)
T PRK04262 311 AIEEK 315 (347)
T ss_pred hHHHh
Confidence 76444
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.4e-39 Score=302.42 Aligned_cols=269 Identities=21% Similarity=0.326 Sum_probs=209.8
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+.+.|+|++.++++.. +|+++..+++..+|+.+|++++|+++|+++++||.|+++++ ++..
T Consensus 8 ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~ 87 (319)
T PRK09352 8 GTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA 87 (319)
T ss_pred EEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC
Confidence 4567899987765532 13334456889999999999999999999999999998875 5556
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+..++..+|+. +++.++++ .+|++++.||..|.++|++|..+++||+++|+++..+. ..++. ...+||||
T Consensus 88 ~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~-~~~~~---~~~~~gDG 161 (319)
T PRK09352 88 FPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVD-WTDRS---TCVLFGDG 161 (319)
T ss_pred CchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccC-cccCC---ceEEEecc
Confidence 788889999999996 68999999 69999999999999999999999999999999874321 23333 36799999
Q ss_pred eEEEEEecCCCCCCCCccceeeee------ecccCCCC----cch----HHHHHHHhh-------ccch---hhHHHhhh
Q 041111 143 GAAILLSNRSSDRRRSKYELVHTL------RTHKGGDD----RSF----GRKIFKMKI-------KPYI---PNFKLAFE 198 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~~~~l~~~~------~~~~~~~~----~~~----g~~~~~~a~-------~~~~---~~~~~did 198 (311)
|+|+||++++.+ ....+++.... ..+.+... ..| ++++++... +.++ +...+|||
T Consensus 162 aaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~ 240 (319)
T PRK09352 162 AGAVVLGASEEP-GILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDID 240 (319)
T ss_pred ceEEEEEEcCCC-CeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 999999997653 11112221111 11111100 001 333333222 1112 22268999
Q ss_pred hhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 199 HICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 199 ~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
+|++||+|.++++.+++.+|+|++++ ..++++|||++++|++++|++++++|++++||+++++++|+|++|+++++|
T Consensus 241 ~~~~h~~~~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 241 WLVPHQANLRIIDATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred EEEECCCCHHHHHHHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEE
Confidence 99999999999999999999999998 678999999999999999999999999999999999999999999999999
Q ss_pred Ee
Q 041111 279 AL 280 (311)
Q Consensus 279 ~~ 280 (311)
|+
T Consensus 318 ~~ 319 (319)
T PRK09352 318 WP 319 (319)
T ss_pred eC
Confidence 85
No 27
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-38 Score=280.09 Aligned_cols=265 Identities=23% Similarity=0.301 Sum_probs=222.4
Q ss_pred chhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHH
Q 041111 16 ADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLI 95 (311)
Q Consensus 16 ~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~ 95 (311)
++.+++..+-|.+..|.++|.++||+.+++.|+|||+|++++++....|++-.++..+||++|++..+.+.+.||+++..
T Consensus 64 ~f~ekN~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~ 143 (356)
T COG3424 64 GFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAA 143 (356)
T ss_pred ChhhhhhhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhh
Confidence 34688899999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCeEEEEEeecccccCccCCCc-cchhhheecccceEEEEEecCCCCC--CCCccceeeeeecccCC
Q 041111 96 SIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDR-SMLLTNCLFRLGGAAILLSNRSSDR--RRSKYELVHTLRTHKGG 172 (311)
Q Consensus 96 Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr-~~~~~~~l~GDGAaA~vLs~~~~~~--~~~~~~l~~~~~~~~~~ 172 (311)
+|..|..++++.|..+|||||+|-||.+|....+. .+++...+||||+||+|++.+.... ....+.+++...+.++.
T Consensus 144 glara~~y~ra~P~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~d 223 (356)
T COG3424 144 GLARARDYCRAAPDANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPD 223 (356)
T ss_pred HHHHHHHHHhhCccceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCc
Confidence 99999999999999999999999999877653333 3577899999999999999865422 22345566544433321
Q ss_pred --CCcch--------------HHHHHHHhhccchhh-------HHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHh
Q 041111 173 --DDRSF--------------GRKIFKMKIKPYIPN-------FKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRM 229 (311)
Q Consensus 173 --~~~~~--------------g~~~~~~a~~~~~~~-------~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~ 229 (311)
+.+.| -..+++.-+++-+.. ..+||+.|+.|.+++++++++.+.||++++.+..||+
T Consensus 224 se~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~ 303 (356)
T COG3424 224 SEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWD 303 (356)
T ss_pred cccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHH
Confidence 11111 122222222221222 2689999999999999999999999999999999999
Q ss_pred hHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeEec
Q 041111 230 TLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRALR 281 (311)
Q Consensus 230 ~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 281 (311)
.+++|||++||++++.|.+.++++ .++|++.++.++|+|++.+.+|++|..
T Consensus 304 ~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 304 VLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 999999999999999999999987 689999999999999999999999975
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.3e-37 Score=294.85 Aligned_cols=274 Identities=16% Similarity=0.170 Sum_probs=204.4
Q ss_pred CCcccccCcccCCCchh-------------------------hhHHHH-----hhcHHHHHHHHHHHHHHHcCCCCCCcC
Q 041111 2 GNMAYVAKAMLDKPADK-------------------------KNMAEA-----RKETESVIIGAIDELLAKTGVKPRDIG 51 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~-----~e~~~~la~~A~~~aL~~agl~~~dId 51 (311)
|.+.|+|++.+++.... ||+... .++..+|+.+|+++||+++|++++|||
T Consensus 7 gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi~~~dId 86 (378)
T PRK06816 7 STGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGFSLGDIE 86 (378)
T ss_pred eeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 67889999988876431 222211 246789999999999999999999999
Q ss_pred EEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccC--C
Q 041111 52 ILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAG--N 128 (311)
Q Consensus 52 ~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~--~ 128 (311)
.||++++ +++..|+.+..++++||++ ++++++++ .+|+|++.||.+|.++|++|..+++|||++|.+|..+... .
T Consensus 87 ~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~ 164 (378)
T PRK06816 87 LLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFE 164 (378)
T ss_pred EEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhh
Confidence 9999875 5677888889999999998 57899998 6999999999999999999999999999999998433210 0
Q ss_pred C---------ccc------hhhheecccceEEEEEecCCCCCCC-Cccceeeeee--------cccC-------------
Q 041111 129 D---------RSM------LLTNCLFRLGGAAILLSNRSSDRRR-SKYELVHTLR--------THKG------------- 171 (311)
Q Consensus 129 d---------r~~------~~~~~l~GDGAaA~vLs~~~~~~~~-~~~~l~~~~~--------~~~~------------- 171 (311)
+ +.. -..+++|||||+|+||++.+..... .........+ ...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 244 (378)
T PRK06816 165 AEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWS 244 (378)
T ss_pred hHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCccCCCCCccCcc
Confidence 0 100 0014579999999999986653211 0000100000 0000
Q ss_pred --C------CCcc-h---HHHHHHHhh-------ccchhh---HHHhhhhhhccCCChHHHHHHHHHc-----CCCcccc
Q 041111 172 --G------DDRS-F---GRKIFKMKI-------KPYIPN---FKLAFEHICIRTGGRAVLDEVEKHL-----KLNEWVM 224 (311)
Q Consensus 172 --~------~~~~-~---g~~~~~~a~-------~~~~~~---~~~did~v~~h~~s~~~~~~~~~~l-----gi~~d~~ 224 (311)
. +... + ++.+++.+. +.++.+ ..+|||+|++||+|.++++.+.+.| |+|+||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~ 324 (378)
T PRK06816 245 DYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW 324 (378)
T ss_pred cCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe
Confidence 0 0000 1 233322221 111222 2589999999999999999999987 9999998
Q ss_pred chhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechh-HHHhhheeeEe
Q 041111 225 EPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSG-FKCNSAVWRAL 280 (311)
Q Consensus 225 ~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G-~~~~a~llr~~ 280 (311)
+.++++||||++||+|++|++++++|++++||+|++++.|+| +++++++|+|.
T Consensus 325 ---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 325 ---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred ---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecccchhheeEEEEEC
Confidence 689999999999999999999999999999999999987765 99999999984
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.3e-36 Score=287.42 Aligned_cols=241 Identities=20% Similarity=0.280 Sum_probs=187.7
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHh
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ 105 (311)
+..+|+.+|+++||+++|+++++||.||++++ +++..|+.+..+++.||++ +++++++ .+|+|++.||.+|.++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999998875 5677899999999999996 5889999 699999999999999999
Q ss_pred CCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCccceeeee-ec--------ccCC----
Q 041111 106 LPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTL-RT--------HKGG---- 172 (311)
Q Consensus 106 ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~-~~--------~~~~---- 172 (311)
+|..+++||+++|.++... ...|+. +.++|||||+|+||++.+.......+++++.. .+ ..|.
T Consensus 171 ~g~~~~vLvv~~e~~s~~~-~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~ 246 (372)
T PRK07515 171 SGSARRVLVVNPEICSGHL-NFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRA 246 (372)
T ss_pred cCCCCEEEEEeeecccccc-cccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCC
Confidence 9999999999999988422 124554 36899999999999986543211223444321 00 0110
Q ss_pred C-------Ccch---HHHHHHHhhcc-------chhh---HHHhhhhhhccCCChHHHHHHHHH-cCC--CccccchhHh
Q 041111 173 D-------DRSF---GRKIFKMKIKP-------YIPN---FKLAFEHICIRTGGRAVLDEVEKH-LKL--NEWVMEPSRM 229 (311)
Q Consensus 173 ~-------~~~~---g~~~~~~a~~~-------~~~~---~~~did~v~~h~~s~~~~~~~~~~-lgi--~~d~~~~s~~ 229 (311)
+ +..| |+.+|+.+.+. ++.. ..+|||+|++||+|.++++.+.+. ||+ ++++. ..
T Consensus 247 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~ 323 (372)
T PRK07515 247 DPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLGRDATPEEA---PV 323 (372)
T ss_pred CccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhccCCCChhhc---eE
Confidence 0 0011 44444443322 1211 258999999999999999999888 565 44554 57
Q ss_pred hHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 230 TLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 230 ~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
++++||||++||+|++|+++. +++++||++++++||+|++|++++||+
T Consensus 324 ~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 324 ILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred eHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHHHhcc
Confidence 899999999999999999984 578999999999999999999999985
No 30
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=1.1e-35 Score=277.92 Aligned_cols=266 Identities=21% Similarity=0.307 Sum_probs=202.9
Q ss_pred CCcccccCcccCCCchh----------------hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCC
Q 041111 2 GNMAYVAKAMLDKPADK----------------KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMP 64 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~~----------------~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p 64 (311)
+++.|+|++.+++.... |++...+++..+|+.+|++++|+++|+++++||.||++++ +....|
T Consensus 6 ~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~ 85 (324)
T cd00827 6 AIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGK 85 (324)
T ss_pred EEEecCCceeecHHHHHHHhCCCcceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCc
Confidence 46789999887776542 3333335789999999999999999999999999999875 445578
Q ss_pred cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceE
Q 041111 65 SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGA 144 (311)
Q Consensus 65 ~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAa 144 (311)
+.+.++++.+|++ +++.++++ .+|+|++.||.+|.++|++|..+++||+++|.++.... ..++ ..++|||||+
T Consensus 86 ~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-~~~~----~~~~~gdgaa 158 (324)
T cd00827 86 SAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-EGSA----LEPTLGDGAA 158 (324)
T ss_pred cHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-CCCC----ccccccCceE
Confidence 8999999999998 78999999 69999999999999999999999999999999984331 0122 3789999999
Q ss_pred EEEEecCCCCCCCCccceeeeee-----c--------ccCCC-------Ccch---H--HHHHH-------Hhhccchhh
Q 041111 145 AILLSNRSSDRRRSKYELVHTLR-----T--------HKGGD-------DRSF---G--RKIFK-------MKIKPYIPN 192 (311)
Q Consensus 145 A~vLs~~~~~~~~~~~~l~~~~~-----~--------~~~~~-------~~~~---g--~~~~~-------~a~~~~~~~ 192 (311)
|+||++.+... .+++.+... . ..... ...| + +++++ .+++..++.
T Consensus 159 A~ll~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (324)
T cd00827 159 AMLVSRNPGIL---AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDR 235 (324)
T ss_pred EEEEecCcccc---cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHH
Confidence 99999977521 011211100 0 00000 0001 0 11221 111111111
Q ss_pred H--HHhhhhhhccCCCh-HHHHHHHHHcCCCccccchhH-hhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeech
Q 041111 193 F--KLAFEHICIRTGGR-AVLDEVEKHLKLNEWVMEPSR-MTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGS 268 (311)
Q Consensus 193 ~--~~did~v~~h~~s~-~~~~~~~~~lgi~~d~~~~s~-~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 268 (311)
. .+|||+|++||+|. ++++.+++.++++++++..+. .++++|||+++||+|++|+++++++++++||+++++++|+
T Consensus 236 ~~~~~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 236 AGLSEDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred cccccccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEecc
Confidence 1 15899999999999 999999999999988886333 2899999999999999999999999999999999999999
Q ss_pred hHHHhhhee
Q 041111 269 GFKCNSAVW 277 (311)
Q Consensus 269 G~~~~a~ll 277 (311)
|++|+++++
T Consensus 316 G~~~~~~~~ 324 (324)
T cd00827 316 GFTAEAFVL 324 (324)
T ss_pred chhheeccC
Confidence 999998864
No 31
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1.7e-33 Score=269.15 Aligned_cols=270 Identities=14% Similarity=0.136 Sum_probs=197.1
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+++.|+|++.+++.+. .++++..+|+..+|+.+|++++|+++ ++++||.|+++|. +.+.
T Consensus 5 ~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~ 82 (379)
T TIGR01835 5 KISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ 82 (379)
T ss_pred EEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC
Confidence 5678999998887643 13344567889999999999999998 8999999999975 5677
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
.|+.+..|++.||++++++++++. ++|+|++.||.+|.++|++|+.+++|||++|... |.. .+. ...+||||
T Consensus 83 ~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~--~~~-~~~----~~~~~GdG 154 (379)
T TIGR01835 83 SKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKVLVIASDIAK--YGL-ESP----GEPTQGAG 154 (379)
T ss_pred CCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh--ccc-CCC----CCccccCc
Confidence 799999999999998779999999 6999999999999999999999999999999864 221 111 13569999
Q ss_pred eEEEEEecCCCCCCC--Ccccee-eeeecccC--CC----Ccch--------HHHHHHHhhccchhhHHHhhhhhhccCC
Q 041111 143 GAAILLSNRSSDRRR--SKYELV-HTLRTHKG--GD----DRSF--------GRKIFKMKIKPYIPNFKLAFEHICIRTG 205 (311)
Q Consensus 143 AaA~vLs~~~~~~~~--~~~~l~-~~~~~~~~--~~----~~~~--------g~~~~~~a~~~~~~~~~~did~v~~h~~ 205 (311)
|+|+||++.+.-... ...... +......+ .. +..+ ..++++..+++ .+...+|||+|++||+
T Consensus 155 A~A~Ll~~~~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~-~g~~~~did~~i~H~p 233 (379)
T TIGR01835 155 AVAMLVSADPKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKR-TGLSLADFAAFCFHVP 233 (379)
T ss_pred cEEEEEecCCCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHH-hCCCHHHcCEEEECCC
Confidence 999999986431000 000000 00000001 10 1111 11222222222 2223689999999999
Q ss_pred ChHHH----HHHHHHcCCCc-ccc----chhHhhHhhcCCcchhhHHHHHHHHHHhC-CCCCCCeEEEEeechhHHHhhh
Q 041111 206 GRAVL----DEVEKHLKLNE-WVM----EPSRMTLYRFGNTSSSCLWYKLAYFEAKR-RIRKGDRTWQIAFGSGFKCNSA 275 (311)
Q Consensus 206 s~~~~----~~~~~~lgi~~-d~~----~~s~~~~~~~Gn~~sas~~~~L~~~~~~g-~l~~Gd~vll~~~G~G~~~~a~ 275 (311)
+.++. +.+.+.++++. +++ ..|+.+.+++|||+++|++++|+++++++ ++++||+|+|+++|+|+....+
T Consensus 234 ~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~ 313 (379)
T TIGR01835 234 FTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFF 313 (379)
T ss_pred CCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeE
Confidence 88773 44566677773 222 22456789999999999999999999986 7999999999999999988888
Q ss_pred eeeEecc
Q 041111 276 VWRALRT 282 (311)
Q Consensus 276 llr~~~~ 282 (311)
.++..+.
T Consensus 314 ~~~~~~~ 320 (379)
T TIGR01835 314 SGTLVAG 320 (379)
T ss_pred EEEEccc
Confidence 7776543
No 32
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.97 E-value=1.9e-30 Score=251.20 Aligned_cols=269 Identities=15% Similarity=0.180 Sum_probs=194.3
Q ss_pred CCcccccCcccCCCch----------------hhhHHH--HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD----------------KKNMAE--ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~----------------~~~~~~--~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
|++.|+|+..+++.+. +||++. .+|+..+|+++|++++|+++|++|++||.||++|. +++.
T Consensus 9 gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~ 88 (459)
T PLN02577 9 AMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK 88 (459)
T ss_pred EEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC
Confidence 5788999998887752 245443 68999999999999999999999999999999985 6678
Q ss_pred CCcHHHHHH---HHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCC--CCeEEEEEeecccccCccCCCccchhhhe
Q 041111 63 MPSLSAMVV---NHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPP--NSCALVVSTENITMNWYAGNDRSMLLTNC 137 (311)
Q Consensus 63 ~p~~a~~v~---~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~--~~~vLvv~~e~~s~~~~~~~dr~~~~~~~ 137 (311)
.|+.+..|+ ..||.+ ++.+|+++ .+|.|++.||.+|.++|++|. .+++|||++|..+.... ..+ .
T Consensus 89 ~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~--~~e------~ 158 (459)
T PLN02577 89 SKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEG--PAR------P 158 (459)
T ss_pred CCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCC--CCC------C
Confidence 999998885 677876 79999999 699999999999999999986 59999999999773211 112 2
Q ss_pred ecccceEEEEEecCCCCCCCC-------ccceeeeeecccCCCCcch--HHHHHHHhh-------ccchh---------h
Q 041111 138 LFRLGGAAILLSNRSSDRRRS-------KYELVHTLRTHKGGDDRSF--GRKIFKMKI-------KPYIP---------N 192 (311)
Q Consensus 138 l~GDGAaA~vLs~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~--g~~~~~~a~-------~~~~~---------~ 192 (311)
..||||+|+||++.+.. ... ...+.+.++.... .+..+ |+.+++..+ +.++. .
T Consensus 159 t~GdGA~A~lv~~~~~~-~l~~~~~g~~~~~~~Df~rP~~~-~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~ 236 (459)
T PLN02577 159 TGGAGAVAMLVGPNAPI-VFESKYRGSHMAHVYDFYKPDLA-SEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQF 236 (459)
T ss_pred CCCcceEEEEEccCCCc-eeecccccccCcccchhcccCCC-CCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 46999999999975531 000 0001111111110 00000 232222221 11111 1
Q ss_pred HHHhhhhhhccCCChHHHHHHHHHcCCC----------------------------------------------ccccch
Q 041111 193 FKLAFEHICIRTGGRAVLDEVEKHLKLN----------------------------------------------EWVMEP 226 (311)
Q Consensus 193 ~~~did~v~~h~~s~~~~~~~~~~lgi~----------------------------------------------~d~~~~ 226 (311)
..+|+|++++||+..++...-.+++.+. .+|+.+
T Consensus 237 ~~~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~p 316 (459)
T PLN02577 237 SISDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQP 316 (459)
T ss_pred CHHHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhcc
Confidence 2689999999999888876654443211 134444
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCC-CCCCCeEEEEeechhHHHhhheeeEecc
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRR-IRKGDRTWQIAFGSGFKCNSAVWRALRT 282 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~-l~~Gd~vll~~~G~G~~~~a~llr~~~~ 282 (311)
+...-+++||++++|+++.|..++++.. ..+|++|+++++|+|.....+-+++.+.
T Consensus 317 s~~~~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 317 TTLIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HhHHHHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 5566789999999999999999998653 4599999999999999988888887654
No 33
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=9.4e-31 Score=243.39 Aligned_cols=277 Identities=18% Similarity=0.213 Sum_probs=216.0
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
++++|.|.-.++.+.+ ++.++..+|+..+|+++|++++|+++++||++|+.|+++|. ..+.
T Consensus 7 ~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~ 86 (377)
T COG3425 7 GIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA 86 (377)
T ss_pred eEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc
Confidence 5788899888777642 36777889999999999999999999999999999999984 4566
Q ss_pred CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccc
Q 041111 63 MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLG 142 (311)
Q Consensus 63 ~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDG 142 (311)
....+..|++.||+++++..+++. .+|-++..||+.|..++.+|..+++|||++|..- +.+ .+.- -...|+|
T Consensus 87 ~K~~at~v~~~lg~~~~~~~~d~~-~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~--~~~-~~~~----E~t~GAG 158 (377)
T COG3425 87 VKPTATIVAEALGLNPSARAADVE-FACYAGTAALQAAIGWVESGMISYGLVIGADTAQ--YAP-GDAL----EYTAGAG 158 (377)
T ss_pred ccchHHHHHHHhCCCCceehhhHH-HHHHHHHHHHHHHHHHHHcCCccceEEEeehhhc--cCC-Cccc----CccCCCc
Confidence 778899999999999999999999 5999999999999999999999999999999865 211 2221 2458999
Q ss_pred eEEEEEecCCCCCCCC--cc----ceeeeeecc---cCCCCcchHHHHH----HHhhccc---hhhHHHhhhhhhccCCC
Q 041111 143 GAAILLSNRSSDRRRS--KY----ELVHTLRTH---KGGDDRSFGRKIF----KMKIKPY---IPNFKLAFEHICIRTGG 206 (311)
Q Consensus 143 AaA~vLs~~~~~~~~~--~~----~l~~~~~~~---~~~~~~~~g~~~~----~~a~~~~---~~~~~~did~v~~h~~s 206 (311)
|+|+|+++.+...... .+ .+.+.++.. .+.-+.+|-...| +.+.+.+ .+...+|+|++++|+++
T Consensus 159 avA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~ 238 (377)
T COG3425 159 AVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPN 238 (377)
T ss_pred eEEEEEccCCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCC
Confidence 9999999964321100 00 111112111 1111222212222 2222222 33337899999999999
Q ss_pred hHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeEeccCCCC
Q 041111 207 RAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPA 286 (311)
Q Consensus 207 ~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~~ 286 (311)
.++....++.++.+.+++.++....++.||++++|+++.|..++++.+ .+||+|+++++|+|....++-++..+.+++.
T Consensus 239 ~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~~~ 317 (377)
T COG3425 239 GKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIEER 317 (377)
T ss_pred CchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHHHH
Confidence 999999999999999999877777789999999999999999999877 7999999999999998888888888777654
Q ss_pred C
Q 041111 287 H 287 (311)
Q Consensus 287 ~ 287 (311)
-
T Consensus 318 ~ 318 (377)
T COG3425 318 R 318 (377)
T ss_pred h
Confidence 3
No 34
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=2.5e-29 Score=226.73 Aligned_cols=231 Identities=18% Similarity=0.171 Sum_probs=185.3
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHh
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ 105 (311)
+..+|+.+|++++|+++|++++|||.|+++++ +++..|+.+.+++..+|++ +.+.+++. .+|+|++.||..|.++|+
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999976 5556899999999999997 68999999 699999999999999999
Q ss_pred CCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCC---CccceeeeeecccCCCC--cch---
Q 041111 106 LPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKGGDD--RSF--- 177 (311)
Q Consensus 106 ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~~~~--~~~--- 177 (311)
+|..+++||+++|. ++|||||+|+||++.+..... ...++.+......+... ...
T Consensus 84 ~g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 146 (254)
T cd00327 84 NGKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEG 146 (254)
T ss_pred CCCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHH
Confidence 99999999999887 458999999999986532111 12334443211111111 011
Q ss_pred HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccc--hhHhhHhhcCCcchhhHHHHHHHHHHhCCC
Q 041111 178 GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVME--PSRMTLYRFGNTSSSCLWYKLAYFEAKRRI 255 (311)
Q Consensus 178 g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~--~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l 255 (311)
-.+.++.++++ .....+|||++++|+.+.+.++.+++.+++++++.+ ....+..++||+++||.++.|.++++..+.
T Consensus 147 ~~~~i~~~l~~-ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~ 225 (254)
T cd00327 147 LARAARKALEG-AGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEH 225 (254)
T ss_pred HHHHHHHHHHH-cCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhC
Confidence 23444555544 444578999999999999999999999998877652 225678899999999999999999887666
Q ss_pred C-------CCCeEEEEeechhHHHhhhee
Q 041111 256 R-------KGDRTWQIAFGSGFKCNSAVW 277 (311)
Q Consensus 256 ~-------~Gd~vll~~~G~G~~~~a~ll 277 (311)
+ +|++++++++|.|++++++++
T Consensus 226 ~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 226 EFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 5 899999999999999998875
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.96 E-value=5.2e-29 Score=240.87 Aligned_cols=271 Identities=15% Similarity=0.214 Sum_probs=194.0
Q ss_pred CCcccccCcccCCCch----------------hhhH--HHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEe-cCCCC
Q 041111 2 GNMAYVAKAMLDKPAD----------------KKNM--AEARKETESVIIGAIDELLAKTGVKPRDIGILVVNS-SLFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~----------------~~~~--~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s-~~~~~ 62 (311)
|++.|+|++.+++.+. ++|| +..+|+..+|+.+|++++|++++++|++||.||++| ++++.
T Consensus 6 ~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~ 85 (454)
T TIGR01833 6 ALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK 85 (454)
T ss_pred EEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC
Confidence 5688999998877643 2454 446899999999999999999999999999999998 47788
Q ss_pred CCcHHHHHHHHc---CCCCCcceeeecCCccchHHHHHHHHHHHHhCCC--CCeEEEEEeecccccCccCCCccchhhhe
Q 041111 63 MPSLSAMVVNHY---KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPP--NSCALVVSTENITMNWYAGNDRSMLLTNC 137 (311)
Q Consensus 63 ~p~~a~~v~~~l---Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~--~~~vLvv~~e~~s~~~~~~~dr~~~~~~~ 137 (311)
.|+.+..|++.| |++ ++.++++. .+|+|++.||.+|.++|+++. .+++|||++|..- | .+.. ...
T Consensus 86 sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~--y---~~~~---~~~ 155 (454)
T TIGR01833 86 SKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIESSSWDGRYALVVAGDIAV--Y---AKGN---ARP 155 (454)
T ss_pred CCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecccc--c---cCCC---eee
Confidence 999999999855 455 89999999 699999999999999999985 5999999999943 3 1222 134
Q ss_pred ecccceEEEEEecCCC---CCCCCccceeee---eeccc----CCCCcc-----h---HHHHHHHhhcc-------ch--
Q 041111 138 LFRLGGAAILLSNRSS---DRRRSKYELVHT---LRTHK----GGDDRS-----F---GRKIFKMKIKP-------YI-- 190 (311)
Q Consensus 138 l~GDGAaA~vLs~~~~---~~~~~~~~l~~~---~~~~~----~~~~~~-----~---g~~~~~~a~~~-------~~-- 190 (311)
++||||+|+||++.+. ..........+. ++... +.-+.. | ..++|....+. ..
T Consensus 156 t~GaGAvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~ 235 (454)
T TIGR01833 156 TGGAGAVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGD 235 (454)
T ss_pred ccccceEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 6799999999998765 111011111111 22111 110111 2 12222221111 11
Q ss_pred -hhHHHhhhhhhccCCChHHHHHH-HHHc----C-----------------------------------------CCccc
Q 041111 191 -PNFKLAFEHICIRTGGRAVLDEV-EKHL----K-----------------------------------------LNEWV 223 (311)
Q Consensus 191 -~~~~~did~v~~h~~s~~~~~~~-~~~l----g-----------------------------------------i~~d~ 223 (311)
....+|+|++++|++..++...- .+.+ . ...+|
T Consensus 236 ~~~~~~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 315 (454)
T TIGR01833 236 RKFTLNDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKK 315 (454)
T ss_pred cCCCHhHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHh
Confidence 12358999999999987776543 2211 1 11144
Q ss_pred cchhHhhHhhcCCcchhhHHHHHHHHHHhCC--CCCCCeEEEEeechhHHHhhheeeEecc
Q 041111 224 MEPSRMTLYRFGNTSSSCLWYKLAYFEAKRR--IRKGDRTWQIAFGSGFKCNSAVWRALRT 282 (311)
Q Consensus 224 ~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~--l~~Gd~vll~~~G~G~~~~a~llr~~~~ 282 (311)
+.++...-+++||++++|+++.|..++++.+ ...|++|+|+++|+|.....+-+++.+.
T Consensus 316 v~ps~~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 316 TKPSLLVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hcchhHHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 5445556679999999999999999998644 4579999999999999988888887755
No 36
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.95 E-value=1.1e-27 Score=224.26 Aligned_cols=246 Identities=16% Similarity=0.113 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHHcCCC----CCCcCEEEEEecC-CCC---------------------CCcHHHHHHHHcCCCCCcc
Q 041111 28 TESVIIGAIDELLAKTGVK----PRDIGILVVNSSL-FNP---------------------MPSLSAMVVNHYKLRGNIL 81 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~----~~dId~ii~~s~~-~~~---------------------~p~~a~~v~~~lGl~~~~~ 81 (311)
..+|+.+|+++||+++|++ +++||.||++++. .+. .|+.+.+++..+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 6789999999999999999 9999999988753 222 677889999999994 68
Q ss_pred eeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCcc----------CCC--c--cchhhheecccceEEEE
Q 041111 82 SYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYA----------GND--R--SMLLTNCLFRLGGAAIL 147 (311)
Q Consensus 82 ~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~----------~~d--r--~~~~~~~l~GDGAaA~v 147 (311)
++++. .+|+|++.||..|.++|++|..+++||+++|..+..+.. +.. + +....+++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 699999999999999999999999999999987632210 000 0 01114889999999999
Q ss_pred EecCCCCCC---CCccceeeeeecccCCCCc---ch---HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcC
Q 041111 148 LSNRSSDRR---RSKYELVHTLRTHKGGDDR---SF---GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLK 218 (311)
Q Consensus 148 Ls~~~~~~~---~~~~~l~~~~~~~~~~~~~---~~---g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lg 218 (311)
|++.+.... ....++.+......+.... .. ..+.++.++++ .+...+|||++++|+.+.++.+.+++.++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~-agl~~~did~~~~h~~~~~~~~~~e~~~~ 246 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAV-AGLTVWDIDYLVAHGTGTPIGDVKELKLL 246 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHH-cCCCHhHCCEEEccCCCCCCCCHHHHHHH
Confidence 998654211 0113344432222121111 11 12333444443 44457899999999999999999888777
Q ss_pred CCcccc--chhHhhHhhcCCcchhhHHHHHHHHHHhCCCC-------------------------CCCeEEEEeechhHH
Q 041111 219 LNEWVM--EPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIR-------------------------KGDRTWQIAFGSGFK 271 (311)
Q Consensus 219 i~~d~~--~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~-------------------------~Gd~vll~~~G~G~~ 271 (311)
.+.++. .....+..++||+++|+.++.|..+++..+.+ +|++++++++|.|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~ 326 (332)
T cd00825 247 RSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGT 326 (332)
T ss_pred HHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCe
Confidence 665531 01257889999999999999999998866555 789999999999999
Q ss_pred Hhhhee
Q 041111 272 CNSAVW 277 (311)
Q Consensus 272 ~~a~ll 277 (311)
++++++
T Consensus 327 ~~~~vl 332 (332)
T cd00825 327 NATLVL 332 (332)
T ss_pred eEEEeC
Confidence 998875
No 37
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.95 E-value=6.8e-27 Score=211.62 Aligned_cols=176 Identities=67% Similarity=1.093 Sum_probs=163.9
Q ss_pred CCCcccccCcccCCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 1 MGNMAYVAKAMLDKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+|++.|+|+...+.|++ ..+....+.+..++..|++++|+++|++|+|||.||+.|+.+.+.|+++.+|.+++|+.+++
T Consensus 57 lG~eTy~P~~~~~~p~~-~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di 135 (290)
T PF08392_consen 57 LGDETYLPPALHEIPPD-PSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDI 135 (290)
T ss_pred CCccccCCcccccCCCc-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCe
Confidence 47899999999999888 78888888889999999999999999999999999999998999999999999999999999
Q ss_pred ceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCcc
Q 041111 81 LSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKY 160 (311)
Q Consensus 81 ~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~ 160 (311)
..+++.|+||++++.+|++|+++++..+..++|||++|.++.+|+...||..++++.+|+||+||++|++.+...+.+.|
T Consensus 136 ~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky 215 (290)
T PF08392_consen 136 KSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKY 215 (290)
T ss_pred eeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchh
Confidence 99999999999999999999999999999999999999999888888899888899999999999999999987778899
Q ss_pred ceeeeeecccCCCCcch
Q 041111 161 ELVHTLRTHKGGDDRSF 177 (311)
Q Consensus 161 ~l~~~~~~~~~~~~~~~ 177 (311)
++.++.|++.|.++..|
T Consensus 216 ~L~~~vRt~~g~~d~ay 232 (290)
T PF08392_consen 216 ELLHTVRTHTGADDDAY 232 (290)
T ss_pred hhhheeeeecCCCCCce
Confidence 99999999988665544
No 38
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.90 E-value=1.2e-23 Score=185.72 Aligned_cols=140 Identities=28% Similarity=0.381 Sum_probs=121.5
Q ss_pred CCCchhhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccch
Q 041111 13 DKPADKKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSA 92 (311)
Q Consensus 13 ~~~~~~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas 92 (311)
..+++.+|+..+.+...+|+.+|+++||+++|++++||++||+.|++....|++..+|.++|||++++..+.+.++||++
T Consensus 85 ~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~g 164 (226)
T PF00195_consen 85 ADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAG 164 (226)
T ss_dssp SSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGH
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhh
Confidence 34567799999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCC--CccchhhheecccceEEEEEecCC
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGN--DRSMLLTNCLFRLGGAAILLSNRS 152 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~--dr~~~~~~~l~GDGAaA~vLs~~~ 152 (311)
++.+|++|..+.++++..+||||++|.+|.+|+.+. ++++++...+|||||+|+||+.+|
T Consensus 165 g~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 165 GAAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999998887543 356788899999999999999864
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.83 E-value=2.4e-21 Score=148.32 Aligned_cols=83 Identities=29% Similarity=0.422 Sum_probs=74.9
Q ss_pred HHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHh
Q 041111 194 KLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCN 273 (311)
Q Consensus 194 ~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~ 273 (311)
.+|||+|++||.|.++++.+++.+|+++|++ ..++++||||++||+|++|++++++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 5799999999999999999999999999998 5788999999999999999999999999999999999999999999
Q ss_pred hheeeE
Q 041111 274 SAVWRA 279 (311)
Q Consensus 274 a~llr~ 279 (311)
++++||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 40
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.81 E-value=8.1e-19 Score=166.22 Aligned_cols=247 Identities=13% Similarity=0.041 Sum_probs=175.4
Q ss_pred hhcHHHHHHHHHHHHHHHcC-CCCCCcCEEEEEec------CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTG-VKPRDIGILVVNSS------LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISI 97 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~ag-l~~~dId~ii~~s~------~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al 97 (311)
.++..+|+.+|++++|++++ +++++||.||+.++ +....+..+..++.++|+..+.+.+++. .+|+|++.||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHH
Confidence 56888999999999999999 79999999887643 2233445678899999996456789999 6999999999
Q ss_pred HHHHHHHhCCCCCeEEEEEeeccccc-----Cc----c-CCCccchhhheecccceEEEEEecCCCCCCCCccceee--e
Q 041111 98 DLAKQLLQLPPNSCALVVSTENITMN-----WY----A-GNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVH--T 165 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~s~~-----~~----~-~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~--~ 165 (311)
..|.++|++|..+.+||+++|.++.. |. . ..++. ++++|||||+++||++.+..... ...+.. .
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a~g~ 216 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLGLGL 216 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEEEEE
Confidence 99999999999999999999987631 10 0 11222 38999999999999986542211 122322 1
Q ss_pred eec--cc-CCCCcch-H---HHHHHHhhccchhhHHHhhhhhhccCCChHHHHHH-----HHHcCCCcc--ccchhHhhH
Q 041111 166 LRT--HK-GGDDRSF-G---RKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEV-----EKHLKLNEW--VMEPSRMTL 231 (311)
Q Consensus 166 ~~~--~~-~~~~~~~-g---~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~-----~~~lgi~~d--~~~~s~~~~ 231 (311)
... .. ...+... + .+.++.+++. ..-..+|||+|+.|..+.+..+.. .+.++-..+ .+ +.+.
T Consensus 217 ~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~-agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~---~~~k 292 (348)
T PRK06147 217 GREPAPVGESEDLPLRGDGLTQAIRAALAE-AGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL---WHPA 292 (348)
T ss_pred eecCCCcccCCCCCCChHHHHHHHHHHHHH-cCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce---ecch
Confidence 111 11 0000111 2 2344555543 333468999999999987775433 344553222 34 5678
Q ss_pred hhcCCcchhhHHHHHHHHH---HhCCCCCCCeEEEEeechhHHHhhheeeEec
Q 041111 232 YRFGNTSSSCLWYKLAYFE---AKRRIRKGDRTWQIAFGSGFKCNSAVWRALR 281 (311)
Q Consensus 232 ~~~Gn~~sas~~~~L~~~~---~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~ 281 (311)
..+||+++|+-.+.+...+ ++| ..+|+++|+++......-++++++.++
T Consensus 293 ~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 293 ECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEEEecCCCCceEEEEEeccc
Confidence 8999999999999988654 344 458999999999988888999999654
No 41
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.79 E-value=6.6e-18 Score=155.23 Aligned_cols=237 Identities=13% Similarity=0.139 Sum_probs=157.1
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++...+|+.+|+++||+++|++++|||.|++++.++ .+..+..+++.||+ +.++++ .+|++++.||.+|..+
T Consensus 46 ~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~-~ACSTf~~AL~lAa~l 118 (327)
T TIGR02845 46 WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLY-GACSTSMETLALGAML 118 (327)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEe-ccCHHHHHHHHHHHHH
Confidence 3456778999999999999999999999999987544 33457899999997 449999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc---ccCccC-----CCccchhhheecccceEEEEEecCCCCCCCCccceeeee--e-cccCC
Q 041111 104 LQLPPNSCALVVSTENIT---MNWYAG-----NDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTL--R-THKGG 172 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s---~~~~~~-----~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~--~-~~~~~ 172 (311)
|++|.+++|||+++|..+ ..|+.+ .+|. +..+|||||+|+||++.+... ++.+.. + ..+|.
T Consensus 119 I~SG~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~~~-----~i~~~t~gkv~d~g~ 190 (327)
T TIGR02845 119 VDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGGGP-----RITSATIGKVVDYGI 190 (327)
T ss_pred HhCCCCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCCCC-----ceEEEEEEEEEecCC
Confidence 999999999999999888 233333 2343 589999999999999876432 333221 1 23443
Q ss_pred CC-cchHHHHHHHhhccc------hhhHHHhhhhhhccCC---ChHHHHHHHHHcCCCccccchhHhhHhhcC-------
Q 041111 173 DD-RSFGRKIFKMKIKPY------IPNFKLAFEHICIRTG---GRAVLDEVEKHLKLNEWVMEPSRMTLYRFG------- 235 (311)
Q Consensus 173 ~~-~~~g~~~~~~a~~~~------~~~~~~did~v~~h~~---s~~~~~~~~~~lgi~~d~~~~s~~~~~~~G------- 235 (311)
.+ ...|...-..+.+.+ ....++|.|.++.--. +.+++..+.++-|++.++. +.++|
T Consensus 191 ~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~------~~dcg~~iy~~~ 264 (327)
T TIGR02845 191 TDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYDVTER------YDDCGVMIYRPD 264 (327)
T ss_pred CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCChhhc------cccCCeEEEcCC
Confidence 22 223433333333322 2223578898887664 5677777776667654321 22332
Q ss_pred ------Ccc-hhhHHHHHHHHHHhCCCCCC--CeEEEEeechhHHHhhheeeEeccCCC
Q 041111 236 ------NTS-SSCLWYKLAYFEAKRRIRKG--DRTWQIAFGSGFKCNSAVWRALRTINP 285 (311)
Q Consensus 236 ------n~~-sas~~~~L~~~~~~g~l~~G--d~vll~~~G~G~~~~a~llr~~~~~~~ 285 (311)
--| ++|......+.++ +++.| .+||+++.|+=++ -+-+.-.+.||-
T Consensus 265 ~~~~aggsgc~csa~v~~~~~~~--~~~~g~~~r~l~v~tgalls--~~s~~q~esip~ 319 (327)
T TIGR02845 265 QQVFAGGSGCACSAVVTYGHILK--EMLRGKLKKVLVVATGALLS--PTTFQQGESIPG 319 (327)
T ss_pred CcccCCCcccchhHHHHHHHHHH--HHhcCcceEEEEEEchhhcC--cchhccCCcCch
Confidence 222 2233333334443 23333 6799988886443 444555666653
No 42
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.73 E-value=1.4e-16 Score=153.29 Aligned_cols=252 Identities=12% Similarity=0.054 Sum_probs=168.8
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|++++|+++|++++|||.||+++. +....+..+..++..+|++..+++++++ .+|+|++.++..|.++
T Consensus 23 ~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~ 101 (393)
T PRK05656 23 NIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQA 101 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHH
Confidence 5778999999999999999999999999999975 3333566778899999998448999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-c-----------------------------Cc----------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-N-----------------------------WY---------------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~-----------------------------~~---------------------------- 125 (311)
|++|..+++||+++|++|. + +.
T Consensus 102 I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~ 181 (393)
T PRK05656 102 IRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181 (393)
T ss_pred HHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999997652 0 00
Q ss_pred --------cCC--Cccch--------------------------------------hhhee-------cccceEEEEEec
Q 041111 126 --------AGN--DRSML--------------------------------------LTNCL-------FRLGGAAILLSN 150 (311)
Q Consensus 126 --------~~~--dr~~~--------------------------------------~~~~l-------~GDGAaA~vLs~ 150 (311)
.+. -++.+ +.+.+ ++|||+|+||++
T Consensus 182 sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s 261 (393)
T PRK05656 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMS 261 (393)
T ss_pred HHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEec
Confidence 000 00000 00114 899999999998
Q ss_pred CCCCCCC-C--ccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 151 RSSDRRR-S--KYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 151 ~~~~~~~-~--~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
.+..... . ..++.+........+.... .....+.+++. ....++|||++-+|-.-.-....+.+.||++.++++.
T Consensus 262 ~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~-agl~~~dId~~e~~d~f~~~~~~~~e~lg~~~~~vn~ 340 (393)
T PRK05656 262 AAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDK-AGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNV 340 (393)
T ss_pred HHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHH-cCCCHHHCCEEEecCccHHHHHHHHHHhCCCCccCCc
Confidence 6532211 1 1134443222111111111 13344445444 4444789999999987555556677899988777642
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
....--+||+.+|+-...+.+++.+-+.+.|.+.|...-..|..-.+++|+.
T Consensus 341 -~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 341 -NGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred -CCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEEEEEcccCcceEEEEEec
Confidence 3344568999999988888888776544444444432222222234566654
No 43
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.73 E-value=1.4e-16 Score=153.08 Aligned_cols=251 Identities=13% Similarity=0.046 Sum_probs=168.2
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|+++||+++|++++|||.||+++. +++..|..+..++..+|++++++.++++ .+|+|++.+|..|.++
T Consensus 19 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~ 97 (386)
T cd00751 19 DVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHH
Confidence 5788999999999999999999999999998865 4455677778899999997447899999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-c------------------C----c--cC--C----------------C-----------
Q 041111 104 LQLPPNSCALVVSTENITM-N------------------W----Y--AG--N----------------D----------- 129 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~------------------~----~--~~--~----------------d----------- 129 (311)
|++|..++|||+++|++|. . + . .+ . .
T Consensus 98 I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~ 177 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRS 177 (386)
T ss_pred HHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999999997641 0 0 0 00 0 0
Q ss_pred -------------------------------------cc--------------------chhhheecccceEEEEEecCC
Q 041111 130 -------------------------------------RS--------------------MLLTNCLFRLGGAAILLSNRS 152 (311)
Q Consensus 130 -------------------------------------r~--------------------~~~~~~l~GDGAaA~vLs~~~ 152 (311)
|. +...+..++|||+|+||++.+
T Consensus 178 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~ 257 (386)
T cd00751 178 HQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEE 257 (386)
T ss_pred HHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHH
Confidence 00 001134457999999999865
Q ss_pred CCCCC--Cc-cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhH
Q 041111 153 SDRRR--SK-YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSR 228 (311)
Q Consensus 153 ~~~~~--~~-~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~ 228 (311)
..... .. ..+.+......+...... .....+.+++. ....++|||++-+|-...-..-.+.+.||+.+..++.+-
T Consensus 258 ~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~-Agi~~~did~~e~~d~f~~~~~~~~e~lg~~~~pvn~~G 336 (386)
T cd00751 258 KAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKR-AGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNG 336 (386)
T ss_pred HHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHH-cCCCHHHcCEEEeechhHHHHHHHHHHhCCChhhcCCCc
Confidence 32211 11 234443222111111100 12334444443 333478999999998776555556788998766654322
Q ss_pred hhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 229 MTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 229 ~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
. .-.+||...++-...+.++..+=+=+.+.+.|...-+.|..-++++++
T Consensus 337 G-~l~~Gh~~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 337 G-AIALGHPLGASGARIVVTLLHELKRRGGRYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred c-hHhhCccHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceEEEEEE
Confidence 2 235899999999888888776422234555555555555555667665
No 44
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.72 E-value=3.6e-16 Score=144.13 Aligned_cols=244 Identities=17% Similarity=0.183 Sum_probs=158.7
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++...+|+.+|+++||+++|++++|||.+|+++... .+..+..+++.||+ +.++++ .+|+++..||.+|..+
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~-gACST~~~AL~lAa~l 124 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLY-GACSTMMESLALGSML 124 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEe-ccCHHHHHHHHHHHHH
Confidence 3566789999999999999999999999999987543 34567899999986 689999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc---cCccCC----CccchhhheecccceEEEEEecCCCCCCCCccceeeee--e-cccCCC
Q 041111 104 LQLPPNSCALVVSTENITM---NWYAGN----DRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTL--R-THKGGD 173 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~---~~~~~~----dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~--~-~~~~~~ 173 (311)
|++|.+++|||+++|..+. .|+.|. .|. ++...+++||+|+||++.+.. .++.+.. + ..+|..
T Consensus 125 I~SG~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp--~taqwtvtGAGA~i~~~~~~~-----~~i~~~t~Gkv~D~g~~ 197 (337)
T PRK08304 125 IDGGFADRVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAVLLSREGSG-----PRITHATIGKVVDLGIK 197 (337)
T ss_pred HhcCCCCEEEEEEcchhhhhhhhccCchhccccCC--CcceEEeeccEEEEEecCCCC-----ceEEEEeEEEEEecCCC
Confidence 9999999999999999983 465442 222 257889999999999987643 2333321 1 234432
Q ss_pred C-cchHHHHHHHhhccc------hhhHHHhhhhhhccCC---ChHHHHHHHHHcCCCccc-cchhHhh-H----hh--cC
Q 041111 174 D-RSFGRKIFKMKIKPY------IPNFKLAFEHICIRTG---GRAVLDEVEKHLKLNEWV-MEPSRMT-L----YR--FG 235 (311)
Q Consensus 174 ~-~~~g~~~~~~a~~~~------~~~~~~did~v~~h~~---s~~~~~~~~~~lgi~~d~-~~~s~~~-~----~~--~G 235 (311)
+ ...|...-..+.+.+ ....++|.|.++.--. +.+++..+.++-|++.++ ..+|--. + .+ -|
T Consensus 198 d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aG 277 (337)
T PRK08304 198 DPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAG 277 (337)
T ss_pred CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCC
Confidence 2 223433333333322 2223678898887764 567777777766776532 2111000 0 00 12
Q ss_pred Ccc-hhhHHHHHHHHHHhCCCCCC--CeEEEEeechhHHHhhheeeEeccCCC
Q 041111 236 NTS-SSCLWYKLAYFEAKRRIRKG--DRTWQIAFGSGFKCNSAVWRALRTINP 285 (311)
Q Consensus 236 n~~-sas~~~~L~~~~~~g~l~~G--d~vll~~~G~G~~~~a~llr~~~~~~~ 285 (311)
--| ++|......+.++ +++.| .+||+++.|+=++ -+-+.-.+.||-
T Consensus 278 gSGc~csa~v~~~~~~~--~~~~g~~~rvl~v~tGaLls--~~s~~qgesip~ 326 (337)
T PRK08304 278 GSGCACSAVVTYGYLLK--ELQKGKLKRVLVVATGALLS--PTSSQQGESIPG 326 (337)
T ss_pred CcccchhHHHHHHHHHH--HHhcCCceEEEEEEchhhcC--cchhccCCcCCh
Confidence 222 2333333344443 23333 6799988886433 444555666653
No 45
>PRK09051 beta-ketothiolase; Provisional
Probab=99.70 E-value=9.7e-16 Score=147.38 Aligned_cols=252 Identities=16% Similarity=0.135 Sum_probs=164.2
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCC-CcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPM-PSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~-p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+++..+|+.+|++++|+++|++|+|||.||+++. +.... +..+..+...+|+++++++++|+ .+|+|++.|+..|.
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~ 101 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAA 101 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHH
Confidence 36688999999999999999999999999999975 43333 34566777888997568999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-cC------------------------ccCC----------------------------
Q 041111 102 QLLQLPPNSCALVVSTENITM-NW------------------------YAGN---------------------------- 128 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~~------------------------~~~~---------------------------- 128 (311)
++|++|..+++||+++|++|. ++ ..+.
T Consensus 102 ~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~av 181 (394)
T PRK09051 102 QAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDALAL 181 (394)
T ss_pred HHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999998872 11 0000
Q ss_pred ---------------------------------Ccc------c----------h-------h---hheecccceEEEEEe
Q 041111 129 ---------------------------------DRS------M----------L-------L---TNCLFRLGGAAILLS 149 (311)
Q Consensus 129 ---------------------------------dr~------~----------~-------~---~~~l~GDGAaA~vLs 149 (311)
+++ . + + .+.-++|||+|+||.
T Consensus 182 ksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa~vl~ 261 (394)
T PRK09051 182 ESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLA 261 (394)
T ss_pred HHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCCCCceEEEEEe
Confidence 000 0 0 0 012236999999998
Q ss_pred cCCCCCCC--Cc-cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccc
Q 041111 150 NRSSDRRR--SK-YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVME 225 (311)
Q Consensus 150 ~~~~~~~~--~~-~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~ 225 (311)
+.+..... .. .++.+........+.... .....+.+++. ....++|||++-+|-.-.-..-.+.+.||+.+++++
T Consensus 262 s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~-agi~~~did~~ei~d~f~~~~~~~~e~lg~~~~~vN 340 (394)
T PRK09051 262 EADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALER-AGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVN 340 (394)
T ss_pred cHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHH-cCCCHHHcCEEEecCccHHHHHHHHHHhCCCccccC
Confidence 75432111 11 244443222111111111 22333444443 333478999999998754545556789999888875
Q ss_pred hhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEE-eechhHHHhhheeeE
Q 041111 226 PSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQI-AFGSGFKCNSAVWRA 279 (311)
Q Consensus 226 ~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~-~~G~G~~~~a~llr~ 279 (311)
.+-..+ -+||..+|+-...+.+++++=+-+.|.+.+.. ..|.|. -.++++++
T Consensus 341 ~~GG~~-a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~~~~c~~gG~-g~a~~~e~ 393 (394)
T PRK09051 341 PNGSGI-SLGHPVGATGAIITVKALYELQRIGGRYALVTMCIGGGQ-GIAAIFER 393 (394)
T ss_pred CCccHH-HhcchHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccCh-hhEEEEEe
Confidence 322222 48999999988888888765332334444432 233333 35666664
No 46
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.69 E-value=1.7e-15 Score=145.68 Aligned_cols=253 Identities=10% Similarity=0.012 Sum_probs=163.0
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCC-cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMP-SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+++..+|+.+|++++|+++|++|++||.||+++. ++...+ ..+..++..+|++.++++++|+ .+|+|++.|+..|.
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~ 101 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAA 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHH
Confidence 35678999999999999999999999999999975 444434 4888999999998669999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-c--------------------Cc-----------------------------------
Q 041111 102 QLLQLPPNSCALVVSTENITM-N--------------------WY----------------------------------- 125 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~--------------------~~----------------------------------- 125 (311)
++|++|.++.+|++++|++|. + |.
T Consensus 102 ~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~ 181 (392)
T PRK07108 102 QRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQ 181 (392)
T ss_pred HHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999872 1 10
Q ss_pred c-------------CC---Cc-c-------------------------------------chhhheecccceEEEEEecC
Q 041111 126 A-------------GN---DR-S-------------------------------------MLLTNCLFRLGGAAILLSNR 151 (311)
Q Consensus 126 ~-------------~~---dr-~-------------------------------------~~~~~~l~GDGAaA~vLs~~ 151 (311)
. .. ++ . +..++...+|||+|+||.+.
T Consensus 182 k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n~~~~~DGAaa~vl~s~ 261 (392)
T PRK07108 182 AAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGNASQFSDGASACVVMNA 261 (392)
T ss_pred HcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCcCCCCCCceEEEEEecH
Confidence 0 00 00 0 00113456788888888865
Q ss_pred CCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchh
Q 041111 152 SSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPS 227 (311)
Q Consensus 152 ~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s 227 (311)
+..... .-.++.+........+...+ .....+.+++. ....++|||++-+|-.-.-..-...+.||+.+++++.
T Consensus 262 ~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~-agl~~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~- 339 (392)
T PRK07108 262 KVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQ-AGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNV- 339 (392)
T ss_pred HHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHH-cCCCHHHcCchHhhhHHHHHHHHHHHhcCCCccccCC-
Confidence 432111 11234433211111111111 12333444443 3334689999988865544434456889998888753
Q ss_pred HhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 228 RMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 228 ~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
..-.--+||..+++-...+.+++.+-+-+.|.+.+...-+.|..-.++++++
T Consensus 340 ~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 340 NGGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred CCChHHhCcchhhhHHHHHHHHHHHHHhhCCCEEEEEEccccChhhEEEEEe
Confidence 2223357999999888877777665332233344332222223334566664
No 47
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.68 E-value=1.1e-15 Score=146.79 Aligned_cols=251 Identities=14% Similarity=0.075 Sum_probs=166.1
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|+++||+++|++++|||.|++++. ++...|..+..++..+|++.++++++++ .+|+|++.++..|.++
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~ 96 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQL 96 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHH
Confidence 5788999999999999999999999999998865 4444577778899999998558999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-c------------C--------cc------------------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-N------------W--------YA------------------------------------ 126 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~------------~--------~~------------------------------------ 126 (311)
|++|..+++||+++|+++. . + ..
T Consensus 97 I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav 176 (386)
T TIGR01930 97 IRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYAL 176 (386)
T ss_pred HHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 9999999999999887541 0 0 00
Q ss_pred --------------------CC-------------C---cc--------------------chhhheecccceEEEEEec
Q 041111 127 --------------------GN-------------D---RS--------------------MLLTNCLFRLGGAAILLSN 150 (311)
Q Consensus 127 --------------------~~-------------d---r~--------------------~~~~~~l~GDGAaA~vLs~ 150 (311)
|. | |. +...+..++|||+|+||++
T Consensus 177 ~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAaa~vl~s 256 (386)
T TIGR01930 177 RSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMS 256 (386)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCCCCcceeEEEEec
Confidence 10 0 00 0001223479999999987
Q ss_pred CCCCCCC-Cc--cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 151 RSSDRRR-SK--YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 151 ~~~~~~~-~~--~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
.+..... .. .++.+........++... .....+.+++. .+..++|||++-+|-...-..-.+.+.||+....++.
T Consensus 257 ~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~-Agi~~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~ 335 (386)
T TIGR01930 257 EERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKK-AGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNV 335 (386)
T ss_pred HHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHH-cCCCHHHCCeeehcchhHHHHHHHHHHhCCChhhcCC
Confidence 5432111 11 134443221111111111 22334444443 3334789999999987765555667889986555532
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
..-.--+||+..++-...+.++..+=+=+.+.+.|..+.+.|..-.+++++
T Consensus 336 -~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 336 -NGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred -CCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceEEEEeC
Confidence 222335799999999888888876422134566666555555444555553
No 48
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.68 E-value=7.7e-16 Score=148.31 Aligned_cols=217 Identities=13% Similarity=0.126 Sum_probs=146.0
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecC-C--------------------------CCCCcHHHHHHHHc
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGI----LVVNSSL-F--------------------------NPMPSLSAMVVNHY 74 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~----ii~~s~~-~--------------------------~~~p~~a~~v~~~l 74 (311)
.....|+.+|+++||+++|++++++|. ++++++. . ...+..+.+++..+
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 456789999999999999999887764 5555431 1 11245678999999
Q ss_pred CCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc---------------------CccCCCccch
Q 041111 75 KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN---------------------WYAGNDRSML 133 (311)
Q Consensus 75 Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~---------------------~~~~~dr~~~ 133 (311)
|++ .+.+.+. .+|+|++.||..|.++|++|..+++||+++|..+.. ..++.|.+.
T Consensus 149 gl~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~- 224 (406)
T cd00834 149 GLR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR- 224 (406)
T ss_pred CCC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC-
Confidence 995 5889999 699999999999999999999999999999987610 011222111
Q ss_pred hhheecccceEEEEEecCCCCCCC---CccceeeeeecccC----CCC--cchHHHHHHHhhccchhhHHHhhhhhhccC
Q 041111 134 LTNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKG----GDD--RSFGRKIFKMKIKPYIPNFKLAFEHICIRT 204 (311)
Q Consensus 134 ~~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~----~~~--~~~g~~~~~~a~~~~~~~~~~did~v~~h~ 204 (311)
.++++||||+|+||++.+..... ....+.+......+ ..+ ..-..+.++.+++. .+...+|||+|.+|.
T Consensus 225 -~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~-agi~~~dId~v~~h~ 302 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALAD-AGLSPEDIDYINAHG 302 (406)
T ss_pred -CCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHH-cCCCHHHCCEEeccc
Confidence 37899999999999986542211 11233332211111 111 11023344555544 444578999999999
Q ss_pred CChHHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 205 GGRAVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 205 ~s~~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
.+....+. +.+.++-..+++. .......+||+.+|+-++.|..+
T Consensus 303 tgt~~~d~~E~~al~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~l~~~ 351 (406)
T cd00834 303 TSTPLNDAAESKAIKRVFGEHAKKVP-VSSTKSMTGHLLGAAGAVEAIAT 351 (406)
T ss_pred ccCccccHHHHHHHHHHhcccCCCCc-eeCcchhhccchhhhhHHHHHHH
Confidence 98876554 3455554322332 14566788999999988888765
No 49
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.67 E-value=2e-15 Score=145.44 Aligned_cols=252 Identities=11% Similarity=0.063 Sum_probs=160.9
Q ss_pred hhcHHHHHHHHHHHHHHHc-CCCCCCcCEEEEEec-CCCCCCc-HHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKT-GVKPRDIGILVVNSS-LFNPMPS-LSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~a-gl~~~dId~ii~~s~-~~~~~p~-~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+++..+|+.+|++++|+++ |++++|||.||++++ ++...+. .+..+...+|++..+++++|+ .+|+|++.|+..|.
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~ 106 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAA 106 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHH
Confidence 4788999999999999997 999999999999965 4444443 344456667997448999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-c------------C-----c-------------------------------------c
Q 041111 102 QLLQLPPNSCALVVSTENITM-N------------W-----Y-------------------------------------A 126 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~------------~-----~-------------------------------------~ 126 (311)
.+|++|..+++||+++|++|. + + . .
T Consensus 107 ~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n 186 (399)
T PRK09052 107 DRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAA 186 (399)
T ss_pred HHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998761 1 0 0 0
Q ss_pred CC----C----ccch-------------------------------------------------hhheecccceEEEEEe
Q 041111 127 GN----D----RSML-------------------------------------------------LTNCLFRLGGAAILLS 149 (311)
Q Consensus 127 ~~----d----r~~~-------------------------------------------------~~~~l~GDGAaA~vLs 149 (311)
+. + ...+ .++..++|||+|+||.
T Consensus 187 ~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~ 266 (399)
T PRK09052 187 QQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILV 266 (399)
T ss_pred HHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccCCCCCceEEEEEe
Confidence 00 0 0000 0125678999999999
Q ss_pred cCCCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccc
Q 041111 150 NRSSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVME 225 (311)
Q Consensus 150 ~~~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~ 225 (311)
+.+..... ...++.+........+...+ .....+.+++. .+..++|||++-+|-.-.-..-.+.+.||+.+.+++
T Consensus 267 se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~-Agi~~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN 345 (399)
T PRK09052 267 SEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQ-AGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVN 345 (399)
T ss_pred cHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHH-cCCCHHHcCEEEeCcHHHHHHHHHHHHhCCCCcccC
Confidence 75432111 11245443322111111111 12333444443 333468999998887654444556788999887775
Q ss_pred hhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 226 PSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 226 ~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
.+-..+ -+||..+++-.+.+.+++.+=+-+.+.+.+...-+.|..-.++++++
T Consensus 346 ~~GG~l-a~GHp~gasG~~~~~~~~~~L~~~~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 346 PLGGAI-ALGHPLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred CCCchh-hcCchHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEEe
Confidence 322222 57999999988888877664222233344433223333334566654
No 50
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.67 E-value=2.6e-15 Score=144.97 Aligned_cols=253 Identities=13% Similarity=0.071 Sum_probs=164.9
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|++++|+++|++++|||.|++++. +....+..+..++..+|++++++.++++ .+|+|++.|+..|.++
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~ 101 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQ 101 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHH
Confidence 6788999999999999999999999999999975 4455677788899999998568999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-c--------------------------------Cc-------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-N--------------------------------WY------------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~--------------------------------~~------------------------- 125 (311)
|++|.++.+||+++|++|. . |.
T Consensus 102 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~ 181 (404)
T PRK06205 102 VQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQDA 181 (404)
T ss_pred HHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999997651 0 00
Q ss_pred ----------c------------C--------C----C-----cc-----------------------chhhheecccce
Q 041111 126 ----------A------------G--------N----D-----RS-----------------------MLLTNCLFRLGG 143 (311)
Q Consensus 126 ----------~------------~--------~----d-----r~-----------------------~~~~~~l~GDGA 143 (311)
. | . + |. +...+...+|||
T Consensus 182 ~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGA 261 (404)
T PRK06205 182 LAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAA 261 (404)
T ss_pred HHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCceeCcccCCCCCce
Confidence 0 0 0 0 00 000012236999
Q ss_pred EEEEEecCCCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCC
Q 041111 144 AAILLSNRSSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKL 219 (311)
Q Consensus 144 aA~vLs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi 219 (311)
+|+||.+.+..... ...++.+............+ .....+.+++. ....++|||++-+|-.-.-..-...+.||+
T Consensus 262 aa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~-Agl~~~Did~~ei~d~f~~~~l~~~e~lg~ 340 (404)
T PRK06205 262 AACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALAR-AGLTLDDIDLIELNEAFAAQVLAVLKEWGF 340 (404)
T ss_pred eEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHH-cCCCHHHCCEeeeccHHHHHHHHHHHHhCc
Confidence 99999886432211 11234333211111111111 22333444443 333468999999888765555556788998
Q ss_pred Cc---cccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeEe
Q 041111 220 NE---WVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 220 ~~---d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~~ 280 (311)
.+ ++++. .--.--+||..+++-...+.+++.+=+-+.+.+.|...-+.|..-.++++++.
T Consensus 341 ~~~~~~~vN~-~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~g~a~~~e~~ 403 (404)
T PRK06205 341 GADDEERLNV-NGSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVFERV 403 (404)
T ss_pred CcccCCCcCC-CCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCChhhEEEEEec
Confidence 76 35542 12223479999998888888777643323344555433333333456777653
No 51
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.66 E-value=3.6e-15 Score=143.49 Aligned_cols=252 Identities=12% Similarity=0.051 Sum_probs=163.4
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|++++|+++|++|+|||.||+++. +....+..+..++..+|++.+++.++++ .+|+|++.|+..|.++
T Consensus 23 ~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~ 101 (393)
T PRK08235 23 DVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQI 101 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHH
Confidence 6788999999999999999999999999999975 3212345566788999997568999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-cC----------------------c-----------------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-NW----------------------Y----------------------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~~----------------------~----------------------------------- 125 (311)
|++|..+++||+++|++|. ++ .
T Consensus 102 I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avk 181 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYR 181 (393)
T ss_pred HHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999998862 10 0
Q ss_pred ------c--------------------------CCC---cc-----c---------------hhhheecccceEEEEEec
Q 041111 126 ------A--------------------------GND---RS-----M---------------LLTNCLFRLGGAAILLSN 150 (311)
Q Consensus 126 ------~--------------------------~~d---r~-----~---------------~~~~~l~GDGAaA~vLs~ 150 (311)
. ..| |. . ...+...+|||+|+||.+
T Consensus 182 sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~~~~~~~~DGAaa~vl~s 261 (393)
T PRK08235 182 SHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMS 261 (393)
T ss_pred HHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEeccccCCCCCceEEEEEec
Confidence 0 000 00 0 001223478888888886
Q ss_pred CCCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 151 RSSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 151 ~~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
.+..... .-.++.+.........+... .....+.++++ ....++|||++-+|-.-....-.+.+.||+.+++++.
T Consensus 262 ~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~-agl~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~ 340 (393)
T PRK08235 262 EDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK-TGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNV 340 (393)
T ss_pred HHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHH-hCCCHHHCCeehhcchhHHHHHHHHHHhCCCcccCCc
Confidence 5431110 11123332111110011100 12233444433 3334689999988776655555667899998888753
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
.--.--+||..+|+-...+.++..+=+-+.|++.+......|..-.+++|+.
T Consensus 341 -~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 341 -NGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred -CCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccceEEEEEEe
Confidence 2222347999999998888888775333456665543333333345666664
No 52
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.65 E-value=1.5e-15 Score=147.23 Aligned_cols=216 Identities=13% Similarity=0.093 Sum_probs=143.8
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEec-CCC-------------------CCCcHHHHHHHHcCCCCCcce
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIG----ILVVNSS-LFN-------------------PMPSLSAMVVNHYKLRGNILS 82 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~-~~~-------------------~~p~~a~~v~~~lGl~~~~~~ 82 (311)
+...|+.+|+++||+++|+++++|| .|+++++ .++ ..+..+..++..+|+. .+.
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3457999999999999999999998 7888753 111 1334677899999996 488
Q ss_pred eeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc----------------CccCCCccchhhheecccceEEE
Q 041111 83 YNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN----------------WYAGNDRSMLLTNCLFRLGGAAI 146 (311)
Q Consensus 83 ~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~----------------~~~~~dr~~~~~~~l~GDGAaA~ 146 (311)
+.+. .+|+|++.||..|.++|++|..+.+||+++|..... ..++.++.. .++++||||+++
T Consensus 164 ~~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~--~g~~~geGAaal 240 (424)
T smart00825 164 VTVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADA--DGYVRGEGVGVV 240 (424)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCC--CcccccceEEEE
Confidence 9999 699999999999999999999999999999975310 011222211 378899999999
Q ss_pred EEecCCCCCCC-C--ccceeeeeecccCCC------CcchHHHHHHHhhccchhhHHHhhhhhhccCCChHHHH-----H
Q 041111 147 LLSNRSSDRRR-S--KYELVHTLRTHKGGD------DRSFGRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLD-----E 212 (311)
Q Consensus 147 vLs~~~~~~~~-~--~~~l~~~~~~~~~~~------~~~~g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~-----~ 212 (311)
||++.+..... . ..++.+......+.. +.......++.+++. .+...+|||++.+|..+.+..+ .
T Consensus 241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-Agl~~~dId~i~~h~tgt~~~d~~E~~a 319 (424)
T smart00825 241 VLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALAR-AGVDPADVDYVEAHGTGTPLGDPIEAEA 319 (424)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHH-hCCCHHHccEEEeeCCCCCCCCHHHHHH
Confidence 99986432111 1 113443321111110 111123444555544 4445789999999988766543 3
Q ss_pred HHHHcCCCc---cccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 213 VEKHLKLNE---WVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 213 ~~~~lgi~~---d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
+.+.++... .++. ...+...+||+.+|+-.+.|...
T Consensus 320 l~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~l~~~ 358 (424)
T smart00825 320 LAAVFGQGRPRDGPLL-LGSVKSNIGHLEAAAGVAGLIKV 358 (424)
T ss_pred HHHHHhccCCCCCceE-EeccccccCCcccchhHHHHHHH
Confidence 445555321 1221 14556678999999988888665
No 53
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.65 E-value=8.6e-15 Score=140.90 Aligned_cols=252 Identities=12% Similarity=0.096 Sum_probs=164.4
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC-CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP-MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~-~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+.++.+|+.+|++++|+++|++|++||.||+++. +... .+..+......+|++.++++++|+ .+|+|++.|+.+|.
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~ 102 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAA 102 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHH
Confidence 35678899999999999999999999999999975 3332 245567777889997679999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-cC------------------c--------------------------------c----
Q 041111 102 QLLQLPPNSCALVVSTENITM-NW------------------Y--------------------------------A---- 126 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~~------------------~--------------------------------~---- 126 (311)
++|++|..+++|++++|++|. ++ . .
T Consensus 103 ~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~ 182 (402)
T PRK08242 103 AKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAAAAWA 182 (402)
T ss_pred HHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999872 21 0 0
Q ss_pred ---------C---------CC-----cc--------chh---------------------------------hheecccc
Q 041111 127 ---------G---------ND-----RS--------MLL---------------------------------TNCLFRLG 142 (311)
Q Consensus 127 ---------~---------~d-----r~--------~~~---------------------------------~~~l~GDG 142 (311)
| .+ |. .+. +....+||
T Consensus 183 ~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DG 262 (402)
T PRK08242 183 EGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDG 262 (402)
T ss_pred cCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccccCceecCcCCCCCCc
Confidence 0 01 10 000 12245788
Q ss_pred eEEEEEecCCCCCCC---CccceeeeeecccCCCCcchH-HHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcC
Q 041111 143 GAAILLSNRSSDRRR---SKYELVHTLRTHKGGDDRSFG-RKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLK 218 (311)
Q Consensus 143 AaA~vLs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~g-~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lg 218 (311)
|+|+||.+.+..... ...++.+.............+ ....+.+++. .+..++|||++-+|-.-....-.+.+.||
T Consensus 263 AaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~-AGl~~~DID~~ei~daFa~~~l~~~e~lG 341 (402)
T PRK08242 263 AAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAK-AGLTVDDIDLFELNEAFASVVLRFMQALD 341 (402)
T ss_pred eEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHHHH-cCCCHHHCCEEEecchhhHHHHHHHHHhC
Confidence 888888875432110 122344322111100001011 2233444443 44447899999998876666666789999
Q ss_pred CCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEE-EeechhHHHhhheeeE
Q 041111 219 LNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQ-IAFGSGFKCNSAVWRA 279 (311)
Q Consensus 219 i~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~~~~a~llr~ 279 (311)
+++++++. .--.--+||..+|+-...+.+++.+=+-+.|.+.+. +..|.|.. .++++++
T Consensus 342 ~~~~~vN~-~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~~~g~~~~c~ggG~g-~a~~~e~ 401 (402)
T PRK08242 342 IPHDKVNV-NGGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMG-IATIIER 401 (402)
T ss_pred CCCcCCCc-CCCHHhcCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCce-eEEEEEe
Confidence 99888753 222345899999998888777766533233344333 22333333 4566654
No 54
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.65 E-value=1.9e-15 Score=139.27 Aligned_cols=274 Identities=16% Similarity=0.210 Sum_probs=184.5
Q ss_pred CCcccccCcccCCCchh----------------hhH--HHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCC
Q 041111 2 GNMAYVAKAMLDKPADK----------------KNM--AEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~~----------------~~~--~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~ 62 (311)
+.++|||...+++.+.+ .+| ...+|+...|...++++++++..|+++.|+.+-+++.+ -.-
T Consensus 16 aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK 95 (462)
T KOG1393|consen 16 AIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK 95 (462)
T ss_pred EEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc
Confidence 57899999999998642 344 34689999999999999999999999999999999843 122
Q ss_pred ---CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCC--CCCeEEEEEeecccccCccCCCccchhhhe
Q 041111 63 ---MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLP--PNSCALVVSTENITMNWYAGNDRSMLLTNC 137 (311)
Q Consensus 63 ---~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag--~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~ 137 (311)
..+...++-.+.|-. ++...|.. .+|-|+..||..|.++|++. ..+.+|||++|..- |....-|.
T Consensus 96 SKSVKt~LMqLF~~sgNt-dIEGiDtt-nACYGGtaALfnavnWiESssWDGr~aivV~gDIAv--Y~~G~aRp------ 165 (462)
T KOG1393|consen 96 SKSVKTVLMQLFEESGNT-DIEGIDTT-NACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV--YAKGNARP------ 165 (462)
T ss_pred chHHHHHHHHHhhhcCCC-cccccccc-ccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEE--ecCCCCCC------
Confidence 333334444444544 78889999 59999999999999999997 36999999999865 32112232
Q ss_pred ecccceEEEEEecCCCCCCCCcccee---eeee-------cccCCCCcc-----h---HHHHHHHhhccchhhH------
Q 041111 138 LFRLGGAAILLSNRSSDRRRSKYELV---HTLR-------THKGGDDRS-----F---GRKIFKMKIKPYIPNF------ 193 (311)
Q Consensus 138 l~GDGAaA~vLs~~~~~~~~~~~~l~---~~~~-------~~~~~~~~~-----~---g~~~~~~a~~~~~~~~------ 193 (311)
+-|-||+|+++++...-....+++.. +.+. .++|.-+.. | ...+|....+++....
T Consensus 166 TGGAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~ 245 (462)
T KOG1393|consen 166 TGGAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSD 245 (462)
T ss_pred CCCcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCc
Confidence 35899999999986541100111111 1111 111111111 1 2233333332211111
Q ss_pred -HHhhhhhhccCCChHHHHHH-H-----------------------------------------HHcCCCccccchhHhh
Q 041111 194 -KLAFEHICIRTGGRAVLDEV-E-----------------------------------------KHLKLNEWVMEPSRMT 230 (311)
Q Consensus 194 -~~did~v~~h~~s~~~~~~~-~-----------------------------------------~~lgi~~d~~~~s~~~ 230 (311)
.+++|++++|.+--++.+.- + -...+-.+|..+|...
T Consensus 246 ~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~ 325 (462)
T KOG1393|consen 246 NLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLA 325 (462)
T ss_pred ccccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEe
Confidence 34899999999987766541 1 0111122244333444
Q ss_pred HhhcCCcchhhHHHHHHHHHHhC--CCCCCCeEEEEeechhHHHhhheeeEeccCCC
Q 041111 231 LYRFGNTSSSCLWYKLAYFEAKR--RIRKGDRTWQIAFGSGFKCNSAVWRALRTINP 285 (311)
Q Consensus 231 ~~~~Gn~~sas~~~~L~~~~~~g--~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~ 285 (311)
-.+.||+.++|+...|..++... .--.|++|++.++|+|..++.+-+|+..+.+|
T Consensus 326 ~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 326 PRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred eccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 46899999999999999999875 22369999999999999999999999887754
No 55
>PRK05790 putative acyltransferase; Provisional
Probab=99.64 E-value=1.3e-14 Score=139.69 Aligned_cols=252 Identities=12% Similarity=0.056 Sum_probs=165.7
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++..+|+.+|+++||+++|++++|||.|++++. +....+..+..++..+|++.+++.++++ .+|+|++.++..|.++
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~ 101 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQA 101 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHH
Confidence 5788999999999999999999999999998864 2222344455677788987557899999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-cC----------------------ccCCC-------------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-NW----------------------YAGND------------------------------- 129 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~~----------------------~~~~d------------------------------- 129 (311)
|++|..+++||+++|.+|. .. ..+.+
T Consensus 102 I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~ 181 (393)
T PRK05790 102 IRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181 (393)
T ss_pred HHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999987631 00 00000
Q ss_pred ------c--c------------------------------------c---h------------hhheecccceEEEEEec
Q 041111 130 ------R--S------------------------------------M---L------------LTNCLFRLGGAAILLSN 150 (311)
Q Consensus 130 ------r--~------------------------------------~---~------------~~~~l~GDGAaA~vLs~ 150 (311)
+ + . + ..+..++|||+|+||++
T Consensus 182 ~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s 261 (393)
T PRK05790 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMS 261 (393)
T ss_pred HHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEec
Confidence 0 0 0 0 01345689999999998
Q ss_pred CCCCCCC--Ccc-ceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccch
Q 041111 151 RSSDRRR--SKY-ELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEP 226 (311)
Q Consensus 151 ~~~~~~~--~~~-~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~ 226 (311)
.+..... ... ++.+........+.... .....+.+++. ....++|||++-+|-.-.-..-.+.+.||+...+++.
T Consensus 262 ~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~-Agi~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~ 340 (393)
T PRK05790 262 EAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEK-AGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNV 340 (393)
T ss_pred HHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHH-cCCCHHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCC
Confidence 6532111 112 44443322111111111 12333444443 3334689999988886544444567889998777753
Q ss_pred hHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 227 SRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 227 s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
.--.--+||..+|+-...+.++..+=+=+.+.+.|.-.-|.|..-++++|++
T Consensus 341 -~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 341 -NGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred -CcchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEc
Confidence 2223347999999999888888765222244555555556665566777775
No 56
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.63 E-value=1.4e-14 Score=139.21 Aligned_cols=241 Identities=12% Similarity=0.045 Sum_probs=161.5
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCC--CCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFN--PMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLA 100 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~--~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A 100 (311)
.+++..+|+.+|++++|+++|+++++||.|+++++ ++. ..+..+..++..+|++ .++.+.++ .+|+|+..+|..|
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A 95 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQA 95 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHH
Confidence 35688999999999999999999999999998864 332 2466788899999997 68999999 6999999999999
Q ss_pred HHHHhCCCCCeEEEEEeecccc-c---------------CccCCC-----------------------------------
Q 041111 101 KQLLQLPPNSCALVVSTENITM-N---------------WYAGND----------------------------------- 129 (311)
Q Consensus 101 ~~~i~ag~~~~vLvv~~e~~s~-~---------------~~~~~d----------------------------------- 129 (311)
.++|++|..+++||+++|.++. . |..+..
T Consensus 96 ~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~ 175 (389)
T PRK06064 96 YLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYN 175 (389)
T ss_pred HHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999999999999999997651 0 000000
Q ss_pred --------------------------ccchhhheecccceEEEEEecCCCCCCC--Cccceeeeeeccc----CCC-Cc-
Q 041111 130 --------------------------RSMLLTNCLFRLGGAAILLSNRSSDRRR--SKYELVHTLRTHK----GGD-DR- 175 (311)
Q Consensus 130 --------------------------r~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~~l~~~~~~~~----~~~-~~- 175 (311)
+-+...+...+|||+|+||++.+..... ...++.+...... ... +.
T Consensus 176 A~~np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~~~~~~~~~~~~ 255 (389)
T PRK06064 176 GSKNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIALHDRKDFT 255 (389)
T ss_pred HhhCcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecCccccccccccc
Confidence 0001123467999999999986432111 1234554432211 111 11
Q ss_pred ch--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhHhhHhhcC
Q 041111 176 SF--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSRMTLYRFG 235 (311)
Q Consensus 176 ~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~~~~~~~G 235 (311)
.. .....+.+++. ....++|||++-+|.......-...+.+|+.+. +++.+-..+ -+|
T Consensus 256 ~~~~~~~a~~~al~~-aGi~~~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l-~~G 333 (389)
T PRK06064 256 TLDAAVVAAEKAYKM-AGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLK-AKG 333 (389)
T ss_pred ccHHHHHHHHHHHHH-cCCCHHHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcc-cCC
Confidence 11 22344444443 334478999999999987776667889998652 232111122 279
Q ss_pred CcchhhHHHHHHHHHHh--CC-------CCCCCeEEEEeech
Q 041111 236 NTSSSCLWYKLAYFEAK--RR-------IRKGDRTWQIAFGS 268 (311)
Q Consensus 236 n~~sas~~~~L~~~~~~--g~-------l~~Gd~vll~~~G~ 268 (311)
|...++-+..+.++.++ |+ ++.-++.+..++|.
T Consensus 334 hp~~a~G~~~~~e~~~qL~g~a~~g~rqv~~a~~~l~~~~g~ 375 (389)
T PRK06064 334 HPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVGG 375 (389)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCCCccCCCccEEEEecCCC
Confidence 99999888888877653 22 22235566666664
No 57
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.62 E-value=1.3e-14 Score=139.87 Aligned_cols=251 Identities=13% Similarity=0.054 Sum_probs=159.6
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++|++|+|||.||++++ +.......+......+|++.++++++|+ .+|+|++.|+..|.++
T Consensus 28 ~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~ 106 (397)
T PRK06954 28 SLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHH
Confidence 5678999999999999999999999999999975 3332233444455567777568999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-cC--c-------------------c-----------------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-NW--Y-------------------A----------------------------------- 126 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~~--~-------------------~----------------------------------- 126 (311)
|++|.++++|++++|++|. ++ . .
T Consensus 107 I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~ 186 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAI 186 (397)
T ss_pred HHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999998871 10 0 0
Q ss_pred ----------CCC--ccc--hh-----------------------------------------hheecccceEEEEEecC
Q 041111 127 ----------GND--RSM--LL-----------------------------------------TNCLFRLGGAAILLSNR 151 (311)
Q Consensus 127 ----------~~d--r~~--~~-----------------------------------------~~~l~GDGAaA~vLs~~ 151 (311)
+.. +.. .+ .+..++|||+|+||.+.
T Consensus 187 ~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~ 266 (397)
T PRK06954 187 ESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRA 266 (397)
T ss_pred HHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEccccCCCCCceEEEEEecH
Confidence 000 000 00 02334899999998875
Q ss_pred CCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchh
Q 041111 152 SSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPS 227 (311)
Q Consensus 152 ~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s 227 (311)
+..... ...++.+.........+... .....+.+++. ....++|||++=+|-.-.-..-...+.||+.+++++.
T Consensus 267 ~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~-agl~~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~- 344 (397)
T PRK06954 267 STAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEK-NGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNV- 344 (397)
T ss_pred HHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHH-cCCCHHHCCEEehhhHHHHHHHHHHHHhCCCcccCCc-
Confidence 432111 11233332111001111111 22233444433 3334689999987776544444456889998888753
Q ss_pred HhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEE-EeechhHHHhhheeeE
Q 041111 228 RMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQ-IAFGSGFKCNSAVWRA 279 (311)
Q Consensus 228 ~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~~~~a~llr~ 279 (311)
.--.--+||..+|+-...+.++..+=+=+.|++-+. +..|.|.. .+++++.
T Consensus 345 ~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g-~a~~~e~ 396 (397)
T PRK06954 345 NGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA-TAMGIEL 396 (397)
T ss_pred CCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-hEEEEEe
Confidence 233345899999998888887766533245665443 34444443 4566654
No 58
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.62 E-value=1.7e-14 Score=138.52 Aligned_cols=240 Identities=15% Similarity=0.060 Sum_probs=159.4
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCC--CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNP--MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~--~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+++..+|+.+|+++||+++|++++|||.|+++++++.. ....+..+++.||+. ..+.++++ .+|+++..++..|.
T Consensus 20 ~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~ 97 (386)
T PRK08313 20 QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAA 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHH
Confidence 467889999999999999999999999999988654321 112236899999998 57899999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccccc-----------Cc---------------------------------------------
Q 041111 102 QLLQLPPNSCALVVSTENITMN-----------WY--------------------------------------------- 125 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~~-----------~~--------------------------------------------- 125 (311)
++|++|..++||||++|+++.. |.
T Consensus 98 ~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~ 177 (386)
T PRK08313 98 SLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPY 177 (386)
T ss_pred HHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcH
Confidence 9999999999999999976410 10
Q ss_pred ---c-C-CC-------c-----cchhhheecccceEEEEEecCCCCCC--CCcc-ceeeeeecc----cCC-CCcch--H
Q 041111 126 ---A-G-ND-------R-----SMLLTNCLFRLGGAAILLSNRSSDRR--RSKY-ELVHTLRTH----KGG-DDRSF--G 178 (311)
Q Consensus 126 ---~-~-~d-------r-----~~~~~~~l~GDGAaA~vLs~~~~~~~--~~~~-~l~~~~~~~----~~~-~~~~~--g 178 (311)
+ + .+ | -+...+..++|||+|+||.+.+.... .... .+.+..... +.. +...+ .
T Consensus 178 A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~ 257 (386)
T PRK08313 178 AHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAG 257 (386)
T ss_pred HhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHH
Confidence 0 1 11 0 02233677899999999998643211 0112 344432211 111 11111 2
Q ss_pred HHHHHHhhccchhhH--HHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhHhhHhhcCCcc
Q 041111 179 RKIFKMKIKPYIPNF--KLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSRMTLYRFGNTS 238 (311)
Q Consensus 179 ~~~~~~a~~~~~~~~--~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~~~~~~~Gn~~ 238 (311)
+...+.+.+. .... .+|||++=+|-.-.-..-...+.||+.++ .++.+--.+. ||-.
T Consensus 258 ~~a~~~a~~~-Agi~~p~~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~--g~p~ 334 (386)
T PRK08313 258 RDAAAALWKA-AGITDPRDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS--SNPI 334 (386)
T ss_pred HHHHHHHHHH-cCCCCChhhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc--cCCC
Confidence 2333334333 3322 58999999999877777777899999876 4554444444 7766
Q ss_pred hhhHHHHHHHHHHh--CC-----CCCCCeEEEEeech
Q 041111 239 SSCLWYKLAYFEAK--RR-----IRKGDRTWQIAFGS 268 (311)
Q Consensus 239 sas~~~~L~~~~~~--g~-----l~~Gd~vll~~~G~ 268 (311)
.++-+..+.++.++ |+ ++.-++.|..+.|.
T Consensus 335 gatG~~~~~e~~~qlrG~ag~rQv~~a~~~l~~~~Gg 371 (386)
T PRK08313 335 GASGMIRFAEAALQVMGKAGEHQVDGARKALGHAYGG 371 (386)
T ss_pred cHHHHHHHHHHHHHhcccccCCcCCCccEEEEeccCC
Confidence 66777777777553 32 33345666666654
No 59
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.61 E-value=3.6e-14 Score=136.39 Aligned_cols=252 Identities=13% Similarity=0.042 Sum_probs=166.8
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC-CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP-MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~-~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|+.+++||.++++++ ++.. .+..+..++..+|++..++.+.|+ .+|+|++.|+..|..
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~ 102 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAE 102 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHH
Confidence 4577999999999999999988899999999964 3322 366777899999997558999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc-c------------------Cc--------------------------------------
Q 041111 103 LLQLPPNSCALVVSTENITM-N------------------WY-------------------------------------- 125 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~-~------------------~~-------------------------------------- 125 (311)
+|++|..+.+||+++|++|. + +.
T Consensus 103 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~a 182 (391)
T PRK07661 103 RIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAE 182 (391)
T ss_pred HHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998761 1 10
Q ss_pred ---cCC-------C----------------------cc--------------------chhhheecccceEEEEEecCCC
Q 041111 126 ---AGN-------D----------------------RS--------------------MLLTNCLFRLGGAAILLSNRSS 153 (311)
Q Consensus 126 ---~~~-------d----------------------r~--------------------~~~~~~l~GDGAaA~vLs~~~~ 153 (311)
+.. + |. +...+..++|||+|+||.+.+.
T Consensus 183 g~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~ 262 (391)
T PRK07661 183 GKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREK 262 (391)
T ss_pred CCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCCCCCceEEEEEecHHH
Confidence 000 0 00 0112445789999999997543
Q ss_pred CCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHh
Q 041111 154 DRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRM 229 (311)
Q Consensus 154 ~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~ 229 (311)
.... ...++.+............+ .....+.+++. ....++|||++-+|-.-.-.--...+.||+.+++++. .-
T Consensus 263 A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~-agl~~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~-~G 340 (391)
T PRK07661 263 AESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKL-AGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNV-NG 340 (391)
T ss_pred HHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHH-cCCCHHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCC-CC
Confidence 2111 11244443222111111111 12333444433 3334689999998876655555566889998877753 23
Q ss_pred hHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 230 TLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 230 ~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
..--+||..+|+-...+.++.++=+-+.|.+.+...-+.|..-.+++|++
T Consensus 341 G~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 341 GAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred ChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhhEEEEEe
Confidence 33457999999999888888775443444554443323333335666664
No 60
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.61 E-value=3.5e-14 Score=136.40 Aligned_cols=225 Identities=13% Similarity=0.055 Sum_probs=153.2
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+++..+|+.+|+++||+++||+++|||.||++++ +....+..+..++..+|++ +.+.++++ .+|+|++.||..|..
T Consensus 17 ~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~ 94 (385)
T PRK12578 17 DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYT 94 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHH
Confidence 36788999999999999999999999999998875 3222233468899999998 46789999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc---------------------cCc------------------------------------
Q 041111 103 LLQLPPNSCALVVSTENITM---------------------NWY------------------------------------ 125 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~---------------------~~~------------------------------------ 125 (311)
+|++|..+++||+++|.++. .+.
T Consensus 95 ~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A 174 (385)
T PRK12578 95 AVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYG 174 (385)
T ss_pred HHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence 99999999999999997651 010
Q ss_pred --cC--------------CC-----ccchhhheecccceEEEEEecCCCCCCC---Cccceeeeeecc----cCCC-C-c
Q 041111 126 --AG--------------ND-----RSMLLTNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTH----KGGD-D-R 175 (311)
Q Consensus 126 --~~--------------~d-----r~~~~~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~----~~~~-~-~ 175 (311)
.| .+ +-+...+..++|||+|+||++.+..... ....+.+..... +... + .
T Consensus 175 ~~np~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~ 254 (385)
T PRK12578 175 AMNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWV 254 (385)
T ss_pred hcCChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccccccccccc
Confidence 00 00 1122336778999999999986432110 123344432211 1111 1 1
Q ss_pred ch--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhHhhHhhcC
Q 041111 176 SF--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSRMTLYRFG 235 (311)
Q Consensus 176 ~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~~~~~~~G 235 (311)
.+ .+...+.+++. ....++|||++-+|..-...--...+.||+.+. +++.+--. --+|
T Consensus 255 ~~~~~~~a~~~al~~-Agi~~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~-la~G 332 (385)
T PRK12578 255 GFKATQLAARQAYNM-AKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGL-KAKG 332 (385)
T ss_pred ccHHHHHHHHHHHHH-cCCCHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCc-ccCC
Confidence 11 12334444443 333478999999999887777777889998762 33211111 1369
Q ss_pred CcchhhHHHHHHHHHHh
Q 041111 236 NTSSSCLWYKLAYFEAK 252 (311)
Q Consensus 236 n~~sas~~~~L~~~~~~ 252 (311)
|...|+-+..+.++..+
T Consensus 333 hP~gatG~~~v~e~~~q 349 (385)
T PRK12578 333 HPLGATGLSMIYEITKQ 349 (385)
T ss_pred CCccHHHHHHHHHHHHH
Confidence 99988888888877653
No 61
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.61 E-value=5.9e-14 Score=128.90 Aligned_cols=244 Identities=13% Similarity=0.151 Sum_probs=154.1
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+++...+|+.+|+++||+++|++++|||.++.++..++..|+ ..+++.||++ .+++. .+|+++..||.+|..+
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~-gACSTg~eAL~lAa~~ 122 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLF-GACSTSMEGLALAALI 122 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----cccee-ecCHHHHHHHHHHHHH
Confidence 456667899999999999999999999999999876666665 5999999954 48999 5999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc---ccCccCC----CccchhhheecccceEEEEEecCCCCCCCCccceeeee--e-cccCCC
Q 041111 104 LQLPPNSCALVVSTENIT---MNWYAGN----DRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTL--R-THKGGD 173 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s---~~~~~~~----dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~--~-~~~~~~ 173 (311)
|++|.+++||++++...+ ..|+.|. .|. ++...---||+|+||++.... .++.+.. + .++|..
T Consensus 123 VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp--~taqwTvTgaga~~l~~~~~~-----~~i~~~T~Gkv~D~g~~ 195 (334)
T PRK12404 123 VNSGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKP--PTAQWTVTGAGAAILSKTGDG-----PRVTSATIGRVVDMGLT 195 (334)
T ss_pred HHcCCCCEEEEEeCcccchhhhhccCcccccCcCC--CcccEEEEceEEEEEecCCCC-----ceEEEEEEEEEEecCCC
Confidence 999999999999988776 3455332 221 233334568999999986543 3333321 1 234432
Q ss_pred C-cchHHHHHHHhhccc------hhhHHHhhhhhhccCC---ChHHHHHHHHHcCCCc--cccchhHhhH----h--hcC
Q 041111 174 D-RSFGRKIFKMKIKPY------IPNFKLAFEHICIRTG---GRAVLDEVEKHLKLNE--WVMEPSRMTL----Y--RFG 235 (311)
Q Consensus 174 ~-~~~g~~~~~~a~~~~------~~~~~~did~v~~h~~---s~~~~~~~~~~lgi~~--d~~~~s~~~~----~--~~G 235 (311)
| ...|...-..+.+.+ ....++|.|.++.--. +.+++..+.++-|++. ++..+|-..+ . .-|
T Consensus 196 d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aG 275 (334)
T PRK12404 196 DPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAG 275 (334)
T ss_pred CcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCC
Confidence 2 223433333333332 2223678898887764 5677777766666653 3332111011 0 112
Q ss_pred Ccch-hhHHHHHHHHHHhCCCCCC--CeEEEEeechhHHHhhheeeEeccCCC
Q 041111 236 NTSS-SCLWYKLAYFEAKRRIRKG--DRTWQIAFGSGFKCNSAVWRALRTINP 285 (311)
Q Consensus 236 n~~s-as~~~~L~~~~~~g~l~~G--d~vll~~~G~G~~~~a~llr~~~~~~~ 285 (311)
--|+ +|.....-+.++ +++.| .+||+++.|+=++ -+-+.-.+.||-
T Consensus 276 gSGcgcsA~v~~g~~~~--~~~~g~~~rvL~v~TGALlS--~~s~~qgesIP~ 324 (334)
T PRK12404 276 ASGPGCSATVTYGHLLN--RMKRGELKRILVVATGALLS--PLSFQQGETIPC 324 (334)
T ss_pred CcccchHHHHHHHHHHH--HHhcCCceEEEEEEchhhcC--cchhccCCcCCh
Confidence 2222 233333334443 23333 6899988886433 444555666653
No 62
>PRK06059 lipid-transfer protein; Provisional
Probab=99.61 E-value=3.2e-14 Score=137.27 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=83.1
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-C-CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-L-FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~-~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+++..+|+.+|+++||+++|++++|||.||++++ + .+..+..+..++..+|+. .++.++++ .+|+|++.+|..|.+
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~ 97 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARA 97 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHH
Confidence 5678999999999999999999999999998764 2 233345568899999997 57899999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
+|++|..+++||+++|+++
T Consensus 98 ~I~sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 98 QILAGLCDVALVVGADTTP 116 (399)
T ss_pred HHHCCCCCEEEEEEEcccC
Confidence 9999999999999999765
No 63
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.60 E-value=1.4e-14 Score=139.75 Aligned_cols=216 Identities=13% Similarity=0.040 Sum_probs=145.9
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEecCC-----------------------CCC--CcHHHHHHHHcC
Q 041111 26 KETESVIIGAIDELLAKTGVKPRD-IG----ILVVNSSLF-----------------------NPM--PSLSAMVVNHYK 75 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~d-Id----~ii~~s~~~-----------------------~~~--p~~a~~v~~~lG 75 (311)
.....|+.+|+++||+++|+++++ ++ +++++++.. ... ...+.+++..+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 446789999999999999998866 44 355554310 111 456788999999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc----c----------------CccCCCccchhh
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM----N----------------WYAGNDRSMLLT 135 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~----~----------------~~~~~dr~~~~~ 135 (311)
+. +.+.+.+. .+|+|++.||..|.++|++|..+.+||+++|.++. . ..+|.|+.. .
T Consensus 150 l~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~ 225 (407)
T cd00828 150 SS-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--D 225 (407)
T ss_pred cC-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--C
Confidence 94 36889999 69999999999999999999999999999998650 0 011222221 3
Q ss_pred heecccceEEEEEecCCCCCCC--C-ccceeeeeecccCC----CCc-chHHHHHHHhhccchhhHHHhhhhhhccCCCh
Q 041111 136 NCLFRLGGAAILLSNRSSDRRR--S-KYELVHTLRTHKGG----DDR-SFGRKIFKMKIKPYIPNFKLAFEHICIRTGGR 207 (311)
Q Consensus 136 ~~l~GDGAaA~vLs~~~~~~~~--~-~~~l~~~~~~~~~~----~~~-~~g~~~~~~a~~~~~~~~~~did~v~~h~~s~ 207 (311)
++++||||+++||++.+..... . ..++.+......+. ... .--.+.++.+++. .+..++|||++..|..+.
T Consensus 226 G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~-Agi~~~dId~i~~hgtgt 304 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAK-AGLSLDDLDVISAHGTST 304 (407)
T ss_pred cEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHH-cCCCHHHcCEEecccccC
Confidence 8999999999999986542211 1 11333332221111 110 1023445555554 444578999999999888
Q ss_pred HHHHH-----HHHHcCCC--ccccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 208 AVLDE-----VEKHLKLN--EWVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 208 ~~~~~-----~~~~lgi~--~d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
...|. +.+.++-. +..+ ..+...+||+.+|+.++.|...
T Consensus 305 ~~~D~~E~~ai~~~~~~~~~~~~v---~s~K~~~Gh~~~Asg~~~l~~~ 350 (407)
T cd00828 305 PANDVAESRAIAEVAGALGAPLPV---TAQKALFGHSKGAAGALQLIGA 350 (407)
T ss_pred ccccHHHHHHHHHHHhccCCCcee---ecccchhccchhhhhHHHHHHH
Confidence 76544 34445432 2344 6788999999999998888765
No 64
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.60 E-value=3.2e-14 Score=138.83 Aligned_cols=260 Identities=13% Similarity=0.099 Sum_probs=168.8
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCC-cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMP-SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+.+..+|+.+|++++|+++|++++|||.|++++. +....+ ..+..++..+|+++.++.++++ .+|+|++.|+..|.
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa 145 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVA 145 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHH
Confidence 36788999999999999999999999999999875 433333 3445677888998558999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-c-----------------------Cc------------------------------cC
Q 041111 102 QLLQLPPNSCALVVSTENITM-N-----------------------WY------------------------------AG 127 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~-----------------------~~------------------------------~~ 127 (311)
++|++|.++.+||+++|++|. + |. .+
T Consensus 146 ~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np 225 (452)
T PLN02287 146 AAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAAT 225 (452)
T ss_pred HHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999997751 0 00 00
Q ss_pred C---Cccc--------------------------------------------------hhhheecccceEEEEEecCCCC
Q 041111 128 N---DRSM--------------------------------------------------LLTNCLFRLGGAAILLSNRSSD 154 (311)
Q Consensus 128 ~---dr~~--------------------------------------------------~~~~~l~GDGAaA~vLs~~~~~ 154 (311)
. -++. ...+..++|||+|+||.+.+..
T Consensus 226 ~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A 305 (452)
T PLN02287 226 ASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVA 305 (452)
T ss_pred hcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHH
Confidence 0 0000 0134567899999999985432
Q ss_pred CCCCccceeeee-ec-ccCCCC--cch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHh
Q 041111 155 RRRSKYELVHTL-RT-HKGGDD--RSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRM 229 (311)
Q Consensus 155 ~~~~~~~l~~~~-~~-~~~~~~--~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~ 229 (311)
... ...+.... .. ..+.+. ..+ .....+.+++. ....++|||++=+|-.-.-.--...+.||+.+++++.+-
T Consensus 306 ~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~-Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sG- 382 (452)
T PLN02287 306 MQK-GLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKA-AGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNG- 382 (452)
T ss_pred HHC-CCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHH-cCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCC-
Confidence 111 11122111 00 111111 111 12233444433 333468999998886544443445689999888875322
Q ss_pred hHhhcCCcchhhHHHHHHHHHHhCCCCCC--CeEEE-EeechhHHHhhheeeEeccCCCCCC
Q 041111 230 TLYRFGNTSSSCLWYKLAYFEAKRRIRKG--DRTWQ-IAFGSGFKCNSAVWRALRTINPAHE 288 (311)
Q Consensus 230 ~~~~~Gn~~sas~~~~L~~~~~~g~l~~G--d~vll-~~~G~G~~~~a~llr~~~~~~~~~~ 288 (311)
-.--+||..+|+-...+.+++.+=+-+.| .+.|. +..|.| .-.++++++...+.+-+.
T Consensus 383 G~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG-~g~a~~ie~~~~~~~~~~ 443 (452)
T PLN02287 383 GAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTG-MGAAAVFERGDSVDELSN 443 (452)
T ss_pred cHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccC-ceeEEEEEecCchhhhhh
Confidence 22347999999988888888765332233 34443 233333 346889999888755443
No 65
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=3.3e-14 Score=136.77 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=88.5
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCC-CCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFN-PMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~-~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+.++.+|+..+++++|+++|++|++||.||+++. +.. ..++.++..+-..||+.+++.+.|+ ..|+|++.|+.+|.
T Consensus 25 ~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa 103 (417)
T PRK06025 25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAA 103 (417)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHH
Confidence 35678999999999999999999999999999976 322 2477889999999999889999999 79999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccc
Q 041111 102 QLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s 121 (311)
++|++|..+.+|++++|.+|
T Consensus 104 ~~I~~G~~~~~laGG~EsmS 123 (417)
T PRK06025 104 AQIMSGMEDLVIAGGTEMMS 123 (417)
T ss_pred HHHHcCCCCEEEEeeeeccC
Confidence 99999999999999999998
No 66
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.60 E-value=2.8e-14 Score=137.62 Aligned_cols=244 Identities=12% Similarity=0.097 Sum_probs=156.9
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC------------------C--------CC-CcHHHHHHHHcC
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGI----LVVNSSLF------------------N--------PM-PSLSAMVVNHYK 75 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~----ii~~s~~~------------------~--------~~-p~~a~~v~~~lG 75 (311)
...+|+.+|+++||+++|++++++|. ++++++.. . .. ...+.+++..+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 35689999999999999999999886 66654210 0 01 124567889999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----------C----------ccCCCccchh
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----------W----------YAGNDRSMLL 134 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----------~----------~~~~dr~~~~ 134 (311)
+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|.+... + .+|.|+..
T Consensus 150 l~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~-- 224 (407)
T TIGR03150 150 AK--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR-- 224 (407)
T ss_pred CC--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--
Confidence 85 5889999 699999999999999999999999999999974310 0 01122211
Q ss_pred hheecccceEEEEEecCCCCCCCC---ccceeeeeecccC----C-CCc-chHHHHHHHhhccchhhHHHhhhhhhccCC
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRRS---KYELVHTLRTHKG----G-DDR-SFGRKIFKMKIKPYIPNFKLAFEHICIRTG 205 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~~---~~~l~~~~~~~~~----~-~~~-~~g~~~~~~a~~~~~~~~~~did~v~~h~~ 205 (311)
.++++||||+++||++.+...... ..++.+......+ . ... .-..+.++.+++. ....++|||++.+|..
T Consensus 225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~-Agi~~~dId~ve~h~t 303 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKD-AGINPEDVDYINAHGT 303 (407)
T ss_pred CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHH-cCCCHhHCCEEeCcCC
Confidence 378899999999999865321111 1133333221111 1 111 0023455555554 4445789999999999
Q ss_pred ChHHHH-----HHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC---------------------
Q 041111 206 GRAVLD-----EVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR--------------------- 256 (311)
Q Consensus 206 s~~~~~-----~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~--------------------- 256 (311)
+....| .+.+.++-...++. .......+||+.+|+-++.+... ++.+.+.
T Consensus 304 gt~~~D~~E~~a~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~ 382 (407)
T TIGR03150 304 STPLGDKAETKAIKRVFGDHAYKLA-VSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEA 382 (407)
T ss_pred CCCCCCHHHHHHHHHHhccCCCCCc-eeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCC
Confidence 885543 35566664322331 13445677999998887776655 3343221
Q ss_pred ---CCCeEEEEeechhHHHhhhee
Q 041111 257 ---KGDRTWQIAFGSGFKCNSAVW 277 (311)
Q Consensus 257 ---~Gd~vll~~~G~G~~~~a~ll 277 (311)
+-.+++.-+||.|.+-++++|
T Consensus 383 ~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 383 RERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred ccCCcCEEEEecccCCCceEEEEe
Confidence 124567777887766666655
No 67
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.59 E-value=5.7e-14 Score=135.27 Aligned_cols=252 Identities=12% Similarity=0.047 Sum_probs=165.8
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCC-cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMP-SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p-~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|++|+|||.|++++. ++...+ ..+.......++..++++++++ .+|+|++.++..|.+
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~~~~p~~~V~-~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPYNIPAMAVD-RQCASSLTTVSIGAM 107 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCCCCCcchhhh-hhhHHHHHHHHHHHH
Confidence 5678999999999999999999999999999875 332222 2222222233344468999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc-c---------------------Cc-----------------------------------
Q 041111 103 LLQLPPNSCALVVSTENITM-N---------------------WY----------------------------------- 125 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~-~---------------------~~----------------------------------- 125 (311)
+|++|.++++||+++|++|. + +.
T Consensus 108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~ 187 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL 187 (394)
T ss_pred HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 99999999999999996651 0 00
Q ss_pred --c--------C---------------CCccchh-------------------------hheecccceEEEEEecCCCCC
Q 041111 126 --A--------G---------------NDRSMLL-------------------------TNCLFRLGGAAILLSNRSSDR 155 (311)
Q Consensus 126 --~--------~---------------~dr~~~~-------------------------~~~l~GDGAaA~vLs~~~~~~ 155 (311)
. . .+++..+ .+...+|||+|+||++.+...
T Consensus 188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~ 267 (394)
T PRK06445 188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVK 267 (394)
T ss_pred HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHH
Confidence 0 0 0100000 033458999999999754321
Q ss_pred CC--Cc-cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhH
Q 041111 156 RR--SK-YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTL 231 (311)
Q Consensus 156 ~~--~~-~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~ 231 (311)
.. .. .++.+............. .....+.+++. ....++|||++=+|..-.-.--...+.||+++++++.+--.
T Consensus 268 ~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~-Agl~~~dId~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~- 345 (394)
T PRK06445 268 KYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEK-AGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGA- 345 (394)
T ss_pred HCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHH-cCCCHHHcCEEEecccchHHHHHHHHHhCCCccccCCCCCH-
Confidence 11 11 134443221111110111 12334444443 33346899999999987666677789999998888643222
Q ss_pred hhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 232 YRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 232 ~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
--+||...|+-...+.++..+=+.+.+.+.|...-|.|..-.+++|+.
T Consensus 346 la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 346 IAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHcCCCccchHHHHHHHHHHHHHhcCCCEEEEEEcccCChhhEEEEEc
Confidence 247999999999988888776555566677766666666667777764
No 68
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.59 E-value=6.9e-14 Score=133.65 Aligned_cols=224 Identities=14% Similarity=0.032 Sum_probs=155.1
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++|+++++||.++++++ +....+..+..++..+|++ .++.++++ .+|+|++.++..|.++
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~ 90 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAA 90 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998865 3333567789999999997 68999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeeccccc-C----cc-----------CCC--------------------------------------
Q 041111 104 LQLPPNSCALVVSTENITMN-W----YA-----------GND-------------------------------------- 129 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~~-~----~~-----------~~d-------------------------------------- 129 (311)
|++|..+.+||+++|.++.. + .. +..
T Consensus 91 I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~ 170 (375)
T cd00829 91 IASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAA 170 (375)
T ss_pred HHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999987621 0 00 000
Q ss_pred ------------------------ccchhhheecccceEEEEEecCCCCCCC--CccceeeeeecccC----C-CC--cc
Q 041111 130 ------------------------RSMLLTNCLFRLGGAAILLSNRSSDRRR--SKYELVHTLRTHKG----G-DD--RS 176 (311)
Q Consensus 130 ------------------------r~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~~l~~~~~~~~~----~-~~--~~ 176 (311)
+-+...+..++|||+|+||++.+..... ....+.+....... . ++ ..
T Consensus 171 ~np~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 250 (375)
T cd00829 171 RNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPSLSERDDFLSL 250 (375)
T ss_pred cCChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCcccccccccccc
Confidence 0001123457999999999986532211 12234443221111 0 11 10
Q ss_pred h-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhHhhHhhcCCc
Q 041111 177 F-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSRMTLYRFGNT 237 (311)
Q Consensus 177 ~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~~~~~~~Gn~ 237 (311)
. .+...+.++++ .....+|||++-+|-.-....-...+.||+.++ +++.+--. --+||.
T Consensus 251 ~~~~~a~~~al~~-Agl~~~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~-la~Ghp 328 (375)
T cd00829 251 DAARLAARRAYKM-AGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGL-LSKGHP 328 (375)
T ss_pred HHHHHHHHHHHHH-cCCCHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCch-hcCCCC
Confidence 0 23344444443 444478999999999888887888899999873 33211111 126999
Q ss_pred chhhHHHHHHHHHHh
Q 041111 238 SSSCLWYKLAYFEAK 252 (311)
Q Consensus 238 ~sas~~~~L~~~~~~ 252 (311)
..++-+..+.++.++
T Consensus 329 ~gatG~~~~~e~~~q 343 (375)
T cd00829 329 LGATGLAQAVEAVRQ 343 (375)
T ss_pred ccHHHHHHHHHHHHH
Confidence 988888777666553
No 69
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.57 E-value=3.4e-15 Score=124.74 Aligned_cols=85 Identities=27% Similarity=0.441 Sum_probs=72.7
Q ss_pred hhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHH----hCCCCC---CCeEEEEeech
Q 041111 196 AFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEA----KRRIRK---GDRTWQIAFGS 268 (311)
Q Consensus 196 did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~----~g~l~~---Gd~vll~~~G~ 268 (311)
++.+|++|.+++++++.+++.|+++++++.+|++.+++|||++|+++++.|++.++ +|.... ++++++++||+
T Consensus 59 ~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGP 138 (151)
T PF02797_consen 59 DILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGP 138 (151)
T ss_dssp GGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEET
T ss_pred ccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECC
Confidence 45689999999999999999999999999999999999999999999999999987 344332 48999999999
Q ss_pred hHHHhhheeeEe
Q 041111 269 GFKCNSAVWRAL 280 (311)
Q Consensus 269 G~~~~a~llr~~ 280 (311)
|++.++++||..
T Consensus 139 G~t~E~~lLr~~ 150 (151)
T PF02797_consen 139 GLTIEGMLLRSV 150 (151)
T ss_dssp TTEEEEEEEEE-
T ss_pred cceEeeEEEeeC
Confidence 999999999964
No 70
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.56 E-value=2.9e-15 Score=126.56 Aligned_cols=141 Identities=20% Similarity=0.283 Sum_probs=107.1
Q ss_pred CCcccccCcccCCCch------------------hhhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCC
Q 041111 2 GNMAYVAKAMLDKPAD------------------KKNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNP 62 (311)
Q Consensus 2 ~~~~~~~~~~~~~~~~------------------~~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~ 62 (311)
+++.|+|+..++.++. +..+...+|+...|++.|++++|++.++++++|+.|+++|. ..+.
T Consensus 9 ~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~ 88 (174)
T PF01154_consen 9 AIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK 88 (174)
T ss_dssp EEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS
T ss_pred EEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc
Confidence 3567888887776642 24567789999999999999999999999999999999984 3445
Q ss_pred CCcHHHHHHHHcCC--CCCcceeeecCCccchHHHHHHHHHHHHhCCC--CCeEEEEEeecccccCccCCCccchhhhee
Q 041111 63 MPSLSAMVVNHYKL--RGNILSYNFGGVGCSAGLISIDLAKQLLQLPP--NSCALVVSTENITMNWYAGNDRSMLLTNCL 138 (311)
Q Consensus 63 ~p~~a~~v~~~lGl--~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~--~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l 138 (311)
..+.+.+|++.||+ .+++..+++. .+|-|+..||+.|..+++++. .+++|||++|... |..... -..
T Consensus 89 sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~--y~~g~~------e~T 159 (174)
T PF01154_consen 89 SKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVASSPWDGRKALVVASDIAR--YDLGSA------EPT 159 (174)
T ss_dssp SS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE----STTTT------GGG
T ss_pred cccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccc--cCCCCc------ccc
Confidence 66789999999999 4467889999 599999999999999999984 5799999999875 321111 134
Q ss_pred cccceEEEEEecC
Q 041111 139 FRLGGAAILLSNR 151 (311)
Q Consensus 139 ~GDGAaA~vLs~~ 151 (311)
-|-||+|+|+++.
T Consensus 160 qGAGAVAmLi~~n 172 (174)
T PF01154_consen 160 QGAGAVAMLIGPN 172 (174)
T ss_dssp -EEEEEEEEEECS
T ss_pred ccceeEEEEecCC
Confidence 6899999999985
No 71
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.56 E-value=2e-13 Score=131.47 Aligned_cols=96 Identities=9% Similarity=0.122 Sum_probs=85.9
Q ss_pred hhcHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecC-C-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAK-TGVKPRDIGILVVNSSL-F-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~-agl~~~dId~ii~~s~~-~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
..++.+|+.+|++++|++ +|++|++||.||+++.. . ...+..+..+...+|++.+++.+.|+ .+|+|++.|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~ 101 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAA 101 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHH
Confidence 456799999999999996 59999999999999752 2 22367889999999999779999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccc
Q 041111 102 QLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s 121 (311)
++|++|..+.+|++++|++|
T Consensus 102 ~~I~sG~~divlagGvEsmS 121 (400)
T PRK13359 102 RAIKSGEAALMIAGGVESMS 121 (400)
T ss_pred HHHHcCCCCEEEEeeeeccC
Confidence 99999999999999999987
No 72
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.56 E-value=7.7e-14 Score=134.97 Aligned_cols=246 Identities=13% Similarity=0.094 Sum_probs=160.6
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC----------------------C----CC-CcHHHHHHHHcC
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIG----ILVVNSSLF----------------------N----PM-PSLSAMVVNHYK 75 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~~~----------------------~----~~-p~~a~~v~~~lG 75 (311)
....|+.+|+++||+++|++++++| +++++++.. . .. ...+.+++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3567999999999999999999888 577665310 0 01 124578899999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C----------------ccCCCccchh
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W----------------YAGNDRSMLL 134 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~----------------~~~~dr~~~~ 134 (311)
+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..+.. | .++.|++.
T Consensus 151 l~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~-- 225 (411)
T PRK07314 151 AK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR-- 225 (411)
T ss_pred CC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--
Confidence 86 5889999 699999999999999999999999999999974311 0 01222221
Q ss_pred hheecccceEEEEEecCCCCCCC---CccceeeeeecccC----C-CCcch-HHHHHHHhhccchhhHHHhhhhhhccCC
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKG----G-DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTG 205 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~----~-~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~ 205 (311)
.++++||||+++||++.+..... ...++.+......+ . +...- ....++.+++. ....++|||++..|..
T Consensus 226 dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~-agi~~~dId~v~~hgt 304 (411)
T PRK07314 226 DGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKD-AGINPEDIDYINAHGT 304 (411)
T ss_pred CCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHH-cCCCHHHCCEEEcccc
Confidence 37899999999999986532111 11234443221111 1 11110 23344555544 4445789999999999
Q ss_pred ChHHHHHH-----HHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC---------------------
Q 041111 206 GRAVLDEV-----EKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR--------------------- 256 (311)
Q Consensus 206 s~~~~~~~-----~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~--------------------- 256 (311)
+.+..+.+ .+.++....++. .......+||+.+|+-.+.+... ++.+.+.
T Consensus 305 gt~~~d~~E~~al~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 383 (411)
T PRK07314 305 STPAGDKAETQAIKRVFGEHAYKVA-VSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEA 383 (411)
T ss_pred CCccccHHHHHHHHHHhcccCCCCe-eECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcc
Confidence 98776554 455664333332 13455678999988877666543 3344322
Q ss_pred ---CCCeEEEEeechhHHHhhheeeE
Q 041111 257 ---KGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 ---~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+-++++.-+||-|.+-++++|+.
T Consensus 384 ~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 384 RERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred cCCCCCEEEEecccCCCceEEEEEec
Confidence 12456777788887777777764
No 73
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.56 E-value=2.2e-13 Score=131.24 Aligned_cols=252 Identities=14% Similarity=0.046 Sum_probs=167.3
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++|++++|||.|++++... ...+..+..++..+|++.+.+.+.++ .+|+|+..++..|.++
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~ 100 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQS 100 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHH
Confidence 467899999999999999999999999999876421 11234456788999997668888999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-c-----------------------------C---c-------------------------
Q 041111 104 LQLPPNSCALVVSTENITM-N-----------------------------W---Y------------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-~-----------------------------~---~------------------------- 125 (311)
|++|.++.+|+++.|.+|. . | .
T Consensus 101 I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~ 180 (394)
T PLN02644 101 IQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQ 180 (394)
T ss_pred HHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999886640 0 0 0
Q ss_pred ---------cC-CCc-------------c--ch--------------h-----------------hheecccceEEEEEe
Q 041111 126 ---------AG-NDR-------------S--ML--------------L-----------------TNCLFRLGGAAILLS 149 (311)
Q Consensus 126 ---------~~-~dr-------------~--~~--------------~-----------------~~~l~GDGAaA~vLs 149 (311)
.+ .-+ . ++ + .+...+|||+|+||+
T Consensus 181 s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~ 260 (394)
T PLN02644 181 SYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLV 260 (394)
T ss_pred HHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEec
Confidence 00 000 0 00 0 134458999999999
Q ss_pred cCCCCCCC--Cc-cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccc
Q 041111 150 NRSSDRRR--SK-YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVME 225 (311)
Q Consensus 150 ~~~~~~~~--~~-~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~ 225 (311)
+.+..... .. .++.+............. .....+.+++. .+..++|||++=+|-.-.-..-.+.+.||+++++++
T Consensus 261 s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~-Agi~~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN 339 (394)
T PLN02644 261 SGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKH-AGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVN 339 (394)
T ss_pred cHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHH-cCCCHHHCCEEEeCcHHHHHHHHHHHHhCCCccccC
Confidence 86532211 11 134443221111111100 22344444443 344478999999888766666667889999888876
Q ss_pred hhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 226 PSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 226 ~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
.+-..+ -+||..+++-...+.++..+-+-+.|...+....+.|..-.+++|++
T Consensus 340 ~~GG~l-~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 340 VHGGAV-SLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred CCCChH-hhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEe
Confidence 433333 58999999999988888775433455666653444444446677765
No 74
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.55 E-value=2.8e-13 Score=130.15 Aligned_cols=250 Identities=9% Similarity=0.045 Sum_probs=164.7
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCC-CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNP-MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~-~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|++|++||.+++++.. ... ....+..+...+|++.+++.+.|+ .+|+|++.|+..|.+
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~ 101 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAG 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHH
Confidence 55679999999999999999999999999999753 222 234566778889998669999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc-cC----------------c------------------------------------c---
Q 041111 103 LLQLPPNSCALVVSTENITM-NW----------------Y------------------------------------A--- 126 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~-~~----------------~------------------------------------~--- 126 (311)
.|++|..+.+|++++|++|. ++ . .
T Consensus 102 ~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~ 181 (387)
T PRK07850 102 LIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWA 181 (387)
T ss_pred HHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999872 10 0 0
Q ss_pred ---------C-------CC---------------------------cc-------chhhheecccceEEEEEecCCCCCC
Q 041111 127 ---------G-------ND---------------------------RS-------MLLTNCLFRLGGAAILLSNRSSDRR 156 (311)
Q Consensus 127 ---------~-------~d---------------------------r~-------~~~~~~l~GDGAaA~vLs~~~~~~~ 156 (311)
| .+ +. +.-++...+|||+|+||.+.+....
T Consensus 182 ~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~sDGAaa~vl~see~A~~ 261 (387)
T PRK07850 182 EGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRARA 261 (387)
T ss_pred cCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcCCceEEEEEecHHHHHH
Confidence 0 00 00 0002445679999999997543211
Q ss_pred C---CccceeeeeecccCCCCc-ch--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhh
Q 041111 157 R---SKYELVHTLRTHKGGDDR-SF--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMT 230 (311)
Q Consensus 157 ~---~~~~l~~~~~~~~~~~~~-~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~ 230 (311)
. ...++.+.... +.+.. .. -+...+.+++. ....++|||.+=+|-.-.-..-...+.+|++.++++.+--.
T Consensus 262 l~~~p~~~i~g~~~~--~~~~~~~~~~~~~a~~~al~~-agl~~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~GG~ 338 (387)
T PRK07850 262 LGLRPRARIVAQALV--GAEPYYHLDGPVQATAKVLEK-AGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGA 338 (387)
T ss_pred cCCCCcEEEEEEEEe--ccCchhhcchHHHHHHHHHHH-cCCCHHHcCeeeecccchHHHHHHHHHcCCCCCCcCCCCch
Confidence 1 11334443211 11111 00 12233444433 33346899999999876655556678999988877532222
Q ss_pred HhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 231 LYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 231 ~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
--+||...++-...+.++.++=+-+.|.+.+...-+.|..-.++++++
T Consensus 339 -la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 339 -IALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred -hhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCceeEEEEEe
Confidence 347999999998888888765332344444443233333335666764
No 75
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54 E-value=2e-13 Score=132.80 Aligned_cols=245 Identities=14% Similarity=0.118 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC------------------EEEEEec----------------CC-------CCCCcH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIG------------------ILVVNSS----------------LF-------NPMPSL 66 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId------------------~ii~~s~----------------~~-------~~~p~~ 66 (311)
...++..|+++||+++|+++.+++ .++.++. +. ...+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456888999999999999654422 1222211 00 134467
Q ss_pred HHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeec---------------ccc--cC----c
Q 041111 67 SAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTEN---------------ITM--NW----Y 125 (311)
Q Consensus 67 a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~---------------~s~--~~----~ 125 (311)
+.+++..+|+. .+++++. .+|+|++.||..|.++|++|.++.+||+++|. ++. ++ .
T Consensus 155 a~~i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 88999999996 5889999 69999999999999999999999999999994 111 00 1
Q ss_pred cCCCccchhhheecccceEEEEEecCCCCCCC-Cc--cceeeeeecc----cC-CCCcch-HHHHHHHhhccchhhHHHh
Q 041111 126 AGNDRSMLLTNCLFRLGGAAILLSNRSSDRRR-SK--YELVHTLRTH----KG-GDDRSF-GRKIFKMKIKPYIPNFKLA 196 (311)
Q Consensus 126 ~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~-~~--~~l~~~~~~~----~~-~~~~~~-g~~~~~~a~~~~~~~~~~d 196 (311)
+|.|++. .++++||||+++||++.+..... .. ..+.+..... .. .....- -.+.++.+++. ....++|
T Consensus 232 rpfd~~r--~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~-agi~p~d 308 (425)
T PRK06501 232 KPFSKDR--DGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD-AGLTPEQ 308 (425)
T ss_pred CCCCCCC--CCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCHHH
Confidence 1223221 37899999999999986542211 11 1222222111 10 011100 13455555554 4445789
Q ss_pred hhhhhccCCChHHHHHH-----HHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCCC-----------
Q 041111 197 FEHICIRTGGRAVLDEV-----EKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIRK----------- 257 (311)
Q Consensus 197 id~v~~h~~s~~~~~~~-----~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~----------- 257 (311)
||++.+|..+....+.+ ++.++-...++. -..+...+||+.+|+-.+.+... +++|.+.|
T Consensus 309 Id~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~p-v~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~ 387 (425)
T PRK06501 309 IDYINAHGTSTPENDKMEYLGLSAVFGERLASIP-VSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAI 387 (425)
T ss_pred cCEEEecCccCcchHHHHHHHHHHHhcccCCCcE-EECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCC
Confidence 99999999998877655 345552212221 13556788999999987777543 44554322
Q ss_pred -------------CCeEEEEeechhHHHhhheeeE
Q 041111 258 -------------GDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 258 -------------Gd~vll~~~G~G~~~~a~llr~ 279 (311)
-++++.-+||-|.+-++++|+.
T Consensus 388 ~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~ 422 (425)
T PRK06501 388 PLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTA 422 (425)
T ss_pred CcccCCCcccCCCCCEEEEeCccCCCeeEEEEEec
Confidence 1345566777777777777764
No 76
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.53 E-value=5.4e-13 Score=128.50 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=85.3
Q ss_pred hhcHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecC--CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAK-TGVKPRDIGILVVNSSL--FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~-agl~~~dId~ii~~s~~--~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+.++.+|+.+|++++|++ +|++|++||.|++++.. ....+..+..++..+|++.+++.+.|+ .+|+|++.|+..|.
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~ 100 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAA 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHH
Confidence 566789999999999995 79999999999999752 222356778899999998669999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccc
Q 041111 102 QLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s 121 (311)
.+|++|..+.+|++++|++|
T Consensus 101 ~~I~sG~~d~~la~G~E~ms 120 (400)
T TIGR02430 101 RAIKAGEADLLIAGGVESMS 120 (400)
T ss_pred HHHHCCCCCEEEEecccccc
Confidence 99999999999999999997
No 77
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=5.2e-13 Score=129.03 Aligned_cols=251 Identities=12% Similarity=0.071 Sum_probs=160.1
Q ss_pred hhcHHHHHHHHHHHHHHHc-CCCCCCcCEEEEEec-CC-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKT-GVKPRDIGILVVNSS-LF-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~a-gl~~~dId~ii~~s~-~~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+.+..+|+.+|+++||+++ |++++|||.+++++. +. ...+..+..++..+|++ .++.+.++ .+|+|+..++..|.
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa 101 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAF 101 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHH
Confidence 5678999999999999997 999999999998853 22 22355678899999997 58999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccccc----------------------------------------------C-----------
Q 041111 102 QLLQLPPNSCALVVSTENITMN----------------------------------------------W----------- 124 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~~----------------------------------------------~----------- 124 (311)
++|++|.++.+||+++|+++.. +
T Consensus 102 ~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~amg~~a~~~~ 181 (406)
T PRK07851 102 HAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVA 181 (406)
T ss_pred HHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 9999999999999998864310 0
Q ss_pred ----c---------------------cC--C----------------C---c-----cc---------h---h---hhee
Q 041111 125 ----Y---------------------AG--N----------------D---R-----SM---------L---L---TNCL 138 (311)
Q Consensus 125 ----~---------------------~~--~----------------d---r-----~~---------~---~---~~~l 138 (311)
. .+ . | | +. . + .+..
T Consensus 182 ~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~ 261 (406)
T PRK07851 182 QLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACP 261 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCCccCCCCcEecCcCCc
Confidence 0 00 0 0 0 00 0 0 1333
Q ss_pred cccceEEEEEecCCCCCCC--Cc-cceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHH
Q 041111 139 FRLGGAAILLSNRSSDRRR--SK-YELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVE 214 (311)
Q Consensus 139 ~GDGAaA~vLs~~~~~~~~--~~-~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~ 214 (311)
.+|||+|+||++.+..... .. .++.+........+...+ .+...+.+++. .+..++|||++=+|-.-.-..-...
T Consensus 262 ~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~-Agi~~~did~~ei~d~f~~~~l~~l 340 (406)
T PRK07851 262 LNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALAR-AGMSIDDIDLVEINEAFAAQVLPSA 340 (406)
T ss_pred cCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHHHH-hCCCHHHCCeehhhhHHHHHHHHHH
Confidence 4788888888865432111 11 234443211110011111 12333444433 3334689999877665444334446
Q ss_pred HHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 215 KHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 215 ~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+.||+.+++++. ..-.--+||..+++-...+.++..+=+-+.|.+.|...-+.|..-.++++++
T Consensus 341 e~lg~~~~pvN~-~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 341 RELGIDEDKLNV-SGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGMAMVLER 404 (406)
T ss_pred HHhCCCccccCC-CCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhhEEEEEe
Confidence 889998777653 2233457999999999888888765433455555554444444445666664
No 78
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.52 E-value=1.3e-13 Score=133.38 Aligned_cols=217 Identities=15% Similarity=0.095 Sum_probs=142.8
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEec-CC-------------------CCCCcHHHHHHHHcCCCCCcc
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGI----LVVNSS-LF-------------------NPMPSLSAMVVNHYKLRGNIL 81 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~----ii~~s~-~~-------------------~~~p~~a~~v~~~lGl~~~~~ 81 (311)
.....|+.+|+++||+++|+++++++. |++++. .+ ...+..+..++..+|+. .+
T Consensus 85 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~ 162 (421)
T cd00833 85 DPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GP 162 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CC
Confidence 345789999999999999999888774 666653 11 01134567899999996 58
Q ss_pred eeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc----------------CccCCCccchhhheecccceEE
Q 041111 82 SYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN----------------WYAGNDRSMLLTNCLFRLGGAA 145 (311)
Q Consensus 82 ~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~----------------~~~~~dr~~~~~~~l~GDGAaA 145 (311)
.+.+. .+|+|++.||..|.++|++|..+.+||+++|.+... ..++.++.. .++++||||++
T Consensus 163 ~~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~--~g~~~geGAaa 239 (421)
T cd00833 163 SLTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA--DGYVRGEGVGV 239 (421)
T ss_pred ceeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC--CCeeeeceEEE
Confidence 99999 699999999999999999999999999999986310 011222211 37889999999
Q ss_pred EEEecCCCCCCC-C--ccceeeeeecccCC-----CC-cchHHHHHHHhhccchhhHHHhhhhhhccCCChHHHHH----
Q 041111 146 ILLSNRSSDRRR-S--KYELVHTLRTHKGG-----DD-RSFGRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDE---- 212 (311)
Q Consensus 146 ~vLs~~~~~~~~-~--~~~l~~~~~~~~~~-----~~-~~~g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~---- 212 (311)
+||++.+..... . ..++.+......+. .. .....+.++.+++. .+...+|||++.+|..+....+.
T Consensus 240 lvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~-Agi~~~did~i~~hgtgt~~~D~~E~~ 318 (421)
T cd00833 240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYAR-AGVDPSDIDYVEAHGTGTPLGDPIEVE 318 (421)
T ss_pred EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHH-hCCCHHHCcEEEeeCCCCCCCCHHHHH
Confidence 999986542111 1 11333332111111 00 11123445555544 44457899999999998766543
Q ss_pred -HHHHcCCCc---cccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 213 -VEKHLKLNE---WVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 213 -~~~~lgi~~---d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
+.+.++-.. .++. ...+...+||+.+|+-++.|...
T Consensus 319 al~~~f~~~~~~~~~~~-v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 319 ALAKVFGGSRSADQPLL-IGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHHHHhccCCCCCcee-eecCcCccccchhhhHHHHHHHH
Confidence 334443211 1111 14566789999999988877654
No 79
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=5.6e-13 Score=128.14 Aligned_cols=252 Identities=10% Similarity=0.095 Sum_probs=160.4
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++||+++|||.+++++.. .......+..++..+|++.+++.+.++ .+|+|++.++..|.++
T Consensus 23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~ 101 (388)
T PRK06366 23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAARE 101 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHH
Confidence 36789999999999999999999999999988652 211234467789999997558999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc-------c-----------------------------C---c-------------------
Q 041111 104 LQLPPNSCALVVSTENITM-------N-----------------------------W---Y------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~-------~-----------------------------~---~------------------- 125 (311)
|++|.++.+|+++.|+++. . + -
T Consensus 102 I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~ 181 (388)
T PRK06366 102 IMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181 (388)
T ss_pred HhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999887651 0 0 0
Q ss_pred -----------cCCC---cc-----------------------------------chhhheecccceEEEEEecCCCCCC
Q 041111 126 -----------AGND---RS-----------------------------------MLLTNCLFRLGGAAILLSNRSSDRR 156 (311)
Q Consensus 126 -----------~~~d---r~-----------------------------------~~~~~~l~GDGAaA~vLs~~~~~~~ 156 (311)
.+.. ++ +...+...+|||+|+||.+.+....
T Consensus 182 vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~ 261 (388)
T PRK06366 182 YSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINE 261 (388)
T ss_pred HHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHH
Confidence 0000 00 0001223378888888886543211
Q ss_pred C---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHh
Q 041111 157 R---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLY 232 (311)
Q Consensus 157 ~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~ 232 (311)
. .-.++.+.........+... .....+.++++ ....++|||.+=+|-.-....-...+.||++.++++.+--.+.
T Consensus 262 l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~-Agl~~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la 340 (388)
T PRK06366 262 YGLKPIARITGYESASLDPLDFVEAPIPATRKLLEK-QNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVA 340 (388)
T ss_pred cCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHH-cCCCHHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchhh
Confidence 0 11134433211111111111 11222223322 2223689999999998766666778999999888864333333
Q ss_pred hcCCcchhhHHHHHHHHHHhCCCCCCCeEEE-EeechhHHHhhheeeEe
Q 041111 233 RFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQ-IAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 233 ~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~~~~a~llr~~ 280 (311)
+||-..|+-...+.++..+=+-+.+.+.+. +..|.| .-.++++++.
T Consensus 341 -~GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c~~gg-~g~a~~~e~~ 387 (388)
T PRK06366 341 -IGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGG-GAHTLTLEMV 387 (388)
T ss_pred -hCCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEecccC-hhhEEEEEec
Confidence 799988888888777766433223334443 223333 3356777764
No 80
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.52 E-value=5.5e-13 Score=128.56 Aligned_cols=96 Identities=10% Similarity=0.125 Sum_probs=85.3
Q ss_pred hhcHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecC--CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAK-TGVKPRDIGILVVNSSL--FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~-agl~~~dId~ii~~s~~--~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+.+..+|+.+|++++|++ +|+++++||.|++++.. ....+..+..++..+|++.+++.+.|+ .+|+|++.|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~ 101 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAA 101 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHH
Confidence 567789999999999995 79999999999999752 222356778899999997679999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeeccc
Q 041111 102 QLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s 121 (311)
++|++|..+.+|++++|++|
T Consensus 102 ~~I~sG~~dvvlagGvEsmS 121 (401)
T PRK09050 102 RAIKAGEAELMIAGGVESMS 121 (401)
T ss_pred HHHHCCCCCEEEEecccccc
Confidence 99999999999999999887
No 81
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.52 E-value=5.1e-13 Score=129.92 Aligned_cols=97 Identities=12% Similarity=0.168 Sum_probs=85.4
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+.+..+|+.+|++++|+++|++|++||.+++++... ...+.++..++..+|++..++.+.|+ .+|+|++.|+..|.+
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~ 103 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAE 103 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHH
Confidence 3567899999999999999999999999999997532 22355677789999998568999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
+|++|..+.+|++++|++|
T Consensus 104 ~I~sG~~dvvLvgG~Esms 122 (428)
T PRK08963 104 SIMAGTIDIGIAGGADSSS 122 (428)
T ss_pred HHHCCCCCEEEEecccccC
Confidence 9999999999999999886
No 82
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=8.1e-13 Score=127.38 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=85.4
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CC-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LF-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|+++++||.+++++. ++ ...+..+..++..+|++..++.+.++ .+|+|++.|+..|.+
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~ 101 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAAR 101 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHH
Confidence 5678999999999999999999999999999975 32 22355677788999998679999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
.|++|..+.+|++++|++|
T Consensus 102 ~I~sG~~dvvlagG~Esms 120 (401)
T PRK08131 102 AITCGEGDLYLAGGVESMS 120 (401)
T ss_pred HHHCCCCCEEEEEEecCCC
Confidence 9999999999999999886
No 83
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=3.7e-13 Score=129.26 Aligned_cols=97 Identities=14% Similarity=0.247 Sum_probs=85.6
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+.++.+|+.+|++++|+++|++|++||.|++++.. .......+..++..+|++.+++.+.|+ .+|+|++.|+..|.+
T Consensus 23 ~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAAN 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHH
Confidence 356789999999999999999999999999999752 222345667788999998669999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
+|++|..+.+|++++|++|
T Consensus 102 ~I~sG~~dvvla~G~E~ms 120 (392)
T PRK06633 102 SIMTGDNEIVIAGGQENMS 120 (392)
T ss_pred HHHcCCCCEEEEcccccCC
Confidence 9999999999999999887
No 84
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.51 E-value=5.1e-13 Score=128.61 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=82.4
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHH-HHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSA-MVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~-~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+...+|+.+|++++|+++|++|++||.||+++. ++...+..+. .+++.+|+. ++++++|+ .+|+|++.++..|.+
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~ 97 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQ 97 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHH
Confidence 4677999999999999999999999999999875 4433355554 367778887 68999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
+|++|..+.+||+++|++|
T Consensus 98 ~I~sG~~~~vlv~g~e~~s 116 (393)
T cd00826 98 LIAGGDANCILAGGFEKME 116 (393)
T ss_pred HHHCCCCCEEEEEeeeccc
Confidence 9999999999999999876
No 85
>PRK06158 thiolase; Provisional
Probab=99.51 E-value=9.1e-13 Score=126.53 Aligned_cols=193 Identities=12% Similarity=0.034 Sum_probs=129.8
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+++..+|+.+|+++||+++|++++|||.|++++. .+..|. ..+++.+|++ ..+.+++. .+|+++..++..|..+
T Consensus 24 ~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~ 98 (384)
T PRK06158 24 PGLSAMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALA 98 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHH
Confidence 46788999999999999999999999999998763 223343 5799999998 47888888 6999999999999999
Q ss_pred HhCCCCCeEEEE-Eeecccc-----c------Cc-------------------------------------------cC-
Q 041111 104 LQLPPNSCALVV-STENITM-----N------WY-------------------------------------------AG- 127 (311)
Q Consensus 104 i~ag~~~~vLvv-~~e~~s~-----~------~~-------------------------------------------~~- 127 (311)
|++|.+++|||+ +.+.++. . |. .|
T Consensus 99 I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~ 178 (384)
T PRK06158 99 LEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPE 178 (384)
T ss_pred HHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCch
Confidence 999999999998 4443321 0 10 00
Q ss_pred ------C------------CccchhhheecccceEEEEEecCCCCCCC--Cccceeeeeecc----cCCC-Ccch--HHH
Q 041111 128 ------N------------DRSMLLTNCLFRLGGAAILLSNRSSDRRR--SKYELVHTLRTH----KGGD-DRSF--GRK 180 (311)
Q Consensus 128 ------~------------dr~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~~l~~~~~~~----~~~~-~~~~--g~~ 180 (311)
- ++-+...+...+|||+|+||.+.+..... ....+.+..... .... +... .+.
T Consensus 179 A~~~~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~ 258 (384)
T PRK06158 179 AFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHRQISSMPDLTVTAAAE 258 (384)
T ss_pred hhhCCCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEecCCcccccccchhhhHHHH
Confidence 0 11122336778999999999986532211 112333322111 1111 1111 222
Q ss_pred HHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc
Q 041111 181 IFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW 222 (311)
Q Consensus 181 ~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d 222 (311)
..+.+.+. .+..++|||++=+|-.-.-.--.+.+.||+.+.
T Consensus 259 aa~~A~~~-AGi~p~DId~~ElyD~Fs~~~l~~~E~lG~~~~ 299 (384)
T PRK06158 259 SGPRAFAM-AGLTPADIDVVELYDAFTINTILFLEDLGFCAK 299 (384)
T ss_pred HHHHHHHH-cCCCHHHCcEEEecCCchHHHHHHHHHcCCCCC
Confidence 33444433 333478999999999876666677899998764
No 86
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=9.7e-13 Score=126.43 Aligned_cols=246 Identities=13% Similarity=0.060 Sum_probs=157.1
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC--CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL--FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~--~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|+++++||.+|+++.. ....+..+....-..||+.+++.+.|+ .+|+|++.|+..|.+
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~ 101 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQ 101 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHH
Confidence 56789999999999999999999999999999752 211245556655666886679999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc-cC------------------------c--------------------------------
Q 041111 103 LLQLPPNSCALVVSTENITM-NW------------------------Y-------------------------------- 125 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~-~~------------------------~-------------------------------- 125 (311)
+|++|..+.+|++|+|++|. ++ .
T Consensus 102 ~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~ygisre~~d~~A~ksh 181 (390)
T PRK06504 102 AVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFALQSH 181 (390)
T ss_pred HHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 99999999999999998872 10 0
Q ss_pred ----c----C-C--------------C----------cc-------------------chhhheecccceEEEEEecCCC
Q 041111 126 ----A----G-N--------------D----------RS-------------------MLLTNCLFRLGGAAILLSNRSS 153 (311)
Q Consensus 126 ----~----~-~--------------d----------r~-------------------~~~~~~l~GDGAaA~vLs~~~~ 153 (311)
. . . + |. +..++...+|||+|+||.+.+.
T Consensus 182 ~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s~~~DGAaA~vl~s~~~ 261 (390)
T PRK06504 182 QRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATASQICDGASGVMVVNERG 261 (390)
T ss_pred HHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCCCCCCceEEEEEecHHH
Confidence 0 0 0 0 00 0011334458999998887643
Q ss_pred CCCC---CccceeeeeecccCCCCcch---HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchh
Q 041111 154 DRRR---SKYELVHTLRTHKGGDDRSF---GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPS 227 (311)
Q Consensus 154 ~~~~---~~~~l~~~~~~~~~~~~~~~---g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s 227 (311)
.... ....+.+.... +.+...+ .....+.+++. ....++|||++=+|-.-.-..-.+.+.||+++++++.+
T Consensus 262 A~~l~~~p~~~i~~~~~~--~~~~~~~~~~~~~a~~~a~~~-agl~~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~ 338 (390)
T PRK06504 262 LKALGVKPLARIHHMTVI--GGDPVIMLEAPLPATERALKK-AGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVN 338 (390)
T ss_pred HHHcCCCceEEEEEEEEe--ecCchhhhccHHHHHHHHHHH-cCCCHHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC
Confidence 2111 11122221100 0111101 12233333333 33347899999999887666667789999998887542
Q ss_pred HhhHhhcCCcchhhH---HHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 228 RMTLYRFGNTSSSCL---WYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 228 ~~~~~~~Gn~~sas~---~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
--. --+||..+++- ...|.+.+++ +.|...+....|.|....+++++
T Consensus 339 GG~-la~Ghp~gatG~r~~~~l~~~lr~---~~~~~gl~~~~~ggg~g~a~ile 388 (390)
T PRK06504 339 GGA-IALGHPLGASGTKLMTTLVHALKQ---RGKRYGLQTMCEGGGMANVTIVE 388 (390)
T ss_pred CcH-HhcCCCcchhHHHHHHHHHHHHHh---hCCCeEEEEEeecccceeEEEEE
Confidence 222 34799998888 5555555543 24555554334334333445554
No 87
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.50 E-value=4.5e-13 Score=129.61 Aligned_cols=242 Identities=15% Similarity=0.129 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecC-C-------------------------CCCC-cHHHHHHHHcCC
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIG----ILVVNSSL-F-------------------------NPMP-SLSAMVVNHYKL 76 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId----~ii~~s~~-~-------------------------~~~p-~~a~~v~~~lGl 76 (311)
...|+..|+++||+++|+++++++ .+++++.. . ...+ ..+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 478999999999999999987776 35554321 0 0111 467789999999
Q ss_pred CCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C----------------ccCCCccchhh
Q 041111 77 RGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W----------------YAGNDRSMLLT 135 (311)
Q Consensus 77 ~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~----------------~~~~dr~~~~~ 135 (311)
. .+.+.+. .+|+|+..||..|.++|++|..+.+||+++|..... | .+|.|+.. .
T Consensus 152 ~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 226 (406)
T PRK08439 152 K--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR--D 226 (406)
T ss_pred C--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--C
Confidence 7 5888899 699999999999999999999999999999963200 0 11233221 3
Q ss_pred heecccceEEEEEecCCCCCCC-C-cc-ceeeeeecc----cCCCC-cchHHHHHHHhhccchhhHHHhhhhhhccCCCh
Q 041111 136 NCLFRLGGAAILLSNRSSDRRR-S-KY-ELVHTLRTH----KGGDD-RSFGRKIFKMKIKPYIPNFKLAFEHICIRTGGR 207 (311)
Q Consensus 136 ~~l~GDGAaA~vLs~~~~~~~~-~-~~-~l~~~~~~~----~~~~~-~~~g~~~~~~a~~~~~~~~~~did~v~~h~~s~ 207 (311)
++++||||+++||++.+..... . .| ++.+..... +...+ .. -.+.++.+++. ... +|||++..|..+.
T Consensus 227 G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~-~~~a~~~al~~-ag~--~~i~~v~~hgtgt 302 (406)
T PRK08439 227 GFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEG-PLRAMKAALEM-AGN--PKIDYINAHGTST 302 (406)
T ss_pred cEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHH-HHHHHHHHHHH-cCC--CccCEEEccCCcC
Confidence 7899999999999986532111 1 11 233322111 11000 11 12344555544 222 6899999999988
Q ss_pred HHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC-----------------------
Q 041111 208 AVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR----------------------- 256 (311)
Q Consensus 208 ~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~----------------------- 256 (311)
+..|. +.+.++-...... ...+...+||+.+|+-.+.+.-. +++|.+.
T Consensus 303 ~~~D~~E~~al~~~f~~~~~~~~-v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 381 (406)
T PRK08439 303 PYNDKNETAALKELFGSKEKVPP-VSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARK 381 (406)
T ss_pred CCCCHHHHHHHHHHhcccCCCCe-EECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCcccc
Confidence 77654 3556663222211 14667789999999987765433 4444322
Q ss_pred -CCCeEEEEeechhHHHhhheeeE
Q 041111 257 -KGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 -~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+-.++|.-+||-|.+-++++|+.
T Consensus 382 ~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 382 AELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCCEEEEeeecCCCceEEEEEec
Confidence 12456777788887777777763
No 88
>PRK08256 lipid-transfer protein; Provisional
Probab=99.50 E-value=9e-13 Score=126.90 Aligned_cols=240 Identities=17% Similarity=0.092 Sum_probs=157.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
.++..+|+.+|+++||+++|++++|||.+++++....... ...+...+|+. .++.++++ .+|+|+..++..|.++|
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I 94 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAV 94 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999988764211111 13467789997 57889999 69999999999999999
Q ss_pred hCCCCCeEEEEEeecccc---------------------------c-Cc-------------------------------
Q 041111 105 QLPPNSCALVVSTENITM---------------------------N-WY------------------------------- 125 (311)
Q Consensus 105 ~ag~~~~vLvv~~e~~s~---------------------------~-~~------------------------------- 125 (311)
++|..+++||+++|.++. . +.
T Consensus 95 ~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~ 174 (391)
T PRK08256 95 RSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKA 174 (391)
T ss_pred HCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999999887641 0 10
Q ss_pred ------cC-------CC------------ccchhhheecccceEEEEEecCCCCCC---CCccceeeeeecc-----cCC
Q 041111 126 ------AG-------ND------------RSMLLTNCLFRLGGAAILLSNRSSDRR---RSKYELVHTLRTH-----KGG 172 (311)
Q Consensus 126 ------~~-------~d------------r~~~~~~~l~GDGAaA~vLs~~~~~~~---~~~~~l~~~~~~~-----~~~ 172 (311)
.| .+ +=+...+...+|||+|+||.+.+.... ....++.+..... ++.
T Consensus 175 ~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~ 254 (391)
T PRK08256 175 RRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDG 254 (391)
T ss_pred HHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccc
Confidence 00 00 001222556689999999998653211 0112344322111 111
Q ss_pred -CCc-c--h--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhH
Q 041111 173 -DDR-S--F--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSR 228 (311)
Q Consensus 173 -~~~-~--~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~ 228 (311)
+.. . + .+...+.+++. .....+|||.+-+|..-....-.+.+.||+.++ +++.+-
T Consensus 255 ~~~~~~~~~~~~~~a~~~a~~~-ag~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~G 333 (391)
T PRK08256 255 RSMIDLVGYDMTRAAAQQVYEQ-AGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSG 333 (391)
T ss_pred cccccccccHHHHHHHHHHHHH-cCCCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCC
Confidence 100 0 0 12233444433 333478999999999987777888899999876 443211
Q ss_pred hhHhhcCCcchhhHHHHHHHHHHh--CC-----CCCCCeEEEEeechhH
Q 041111 229 MTLYRFGNTSSSCLWYKLAYFEAK--RR-----IRKGDRTWQIAFGSGF 270 (311)
Q Consensus 229 ~~~~~~Gn~~sas~~~~L~~~~~~--g~-----l~~Gd~vll~~~G~G~ 270 (311)
-.+ -+||...|+-+..+.++..+ |+ ++.....+..+.|.|.
T Consensus 334 G~l-s~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~~~~l~~~~G~~~ 381 (391)
T PRK08256 334 GLL-SKGHPLGATGLAQCAELTWQLRGTAGARQVEGARLALQHNLGLGG 381 (391)
T ss_pred ccc-cCCCCccHHHHHHHHHHHHHhcCCcCCCcCCccceEEEeccccce
Confidence 222 26999988888888887663 21 3334566667777543
No 89
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=1.3e-12 Score=125.60 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=83.5
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCC--CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNP--MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~--~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
.+++..+|+.+|+++||+++|++++|||.+|+++.++.. .+..+..+++.+|+. ..+.+.++ .+|+++..++..|.
T Consensus 25 ~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~ 102 (392)
T PRK06065 25 LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGW 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHH
Confidence 467889999999999999999999999999988643322 455778899999987 47999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecc
Q 041111 102 QLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~ 120 (311)
++|++|..++||||++|++
T Consensus 103 ~~I~sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 103 YHVASGLCQKVLAVAEEKM 121 (392)
T ss_pred HHHhCCCCCEEEEEEeecc
Confidence 9999999999999999974
No 90
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.50 E-value=3.6e-13 Score=130.91 Aligned_cols=245 Identities=16% Similarity=0.111 Sum_probs=159.3
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEecC-C---------------------CCCC-----cHHHHHHHHc
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDI-G----ILVVNSSL-F---------------------NPMP-----SLSAMVVNHY 74 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dI-d----~ii~~s~~-~---------------------~~~p-----~~a~~v~~~l 74 (311)
....|+..|+++||+++|++++++ + +|+++++. . +..+ ..+.+++..+
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356789999999999999988776 3 46666531 1 0011 2356789999
Q ss_pred CCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----------C----c-------cCCCccc
Q 041111 75 KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----------W----Y-------AGNDRSM 132 (311)
Q Consensus 75 Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----------~----~-------~~~dr~~ 132 (311)
|+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|.+... + . +|.|+..
T Consensus 161 gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 6899999 799999999999999999999999999999974210 0 0 1222221
Q ss_pred hhhheecccceEEEEEecCCCCCCC--Cc-cceeeeeecc----cCCCC--cchHHHHHHHhhccchhhHHHhhhhhhcc
Q 041111 133 LLTNCLFRLGGAAILLSNRSSDRRR--SK-YELVHTLRTH----KGGDD--RSFGRKIFKMKIKPYIPNFKLAFEHICIR 203 (311)
Q Consensus 133 ~~~~~l~GDGAaA~vLs~~~~~~~~--~~-~~l~~~~~~~----~~~~~--~~~g~~~~~~a~~~~~~~~~~did~v~~h 203 (311)
.+++.||||+++||++.+..... .. .++.+..... +.... ...-.+.++.+++. ....++|||++-.|
T Consensus 238 --~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~-Agi~p~dId~i~~h 314 (424)
T PRK06333 238 --DGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQ-AGIPPEEVQHLNAH 314 (424)
T ss_pred --CCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHH-cCCCHHHCCEEecc
Confidence 37889999999999985432111 11 1344432211 11111 11124455666554 44457899999999
Q ss_pred CCChHHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCC--------------------
Q 041111 204 TGGRAVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRI-------------------- 255 (311)
Q Consensus 204 ~~s~~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l-------------------- 255 (311)
..+....|. +.+.++ ....+. .......+||+.+|+-.+.+... ++.|.+
T Consensus 315 gtgt~~~D~~E~~al~~~fg-~~~~~~-v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~ 392 (424)
T PRK06333 315 ATSTPVGDLGEVAAIKKVFG-HVSGLA-VSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVA 392 (424)
T ss_pred CCCCccchHHHHHHHHHHhC-CCCCce-eECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccccc
Confidence 998876543 456676 211221 14567889999988866655443 444322
Q ss_pred -----CCCCeEEEEeechhHHHhhheeeE
Q 041111 256 -----RKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 256 -----~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
.+-++++.-+||.|.+..+++|+.
T Consensus 393 ~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 393 NKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred CCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 123566777889888878888764
No 91
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.50 E-value=2.9e-13 Score=131.08 Aligned_cols=244 Identities=15% Similarity=0.108 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHcCCCC---CCcCEEEEEec----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 041111 28 TESVIIGAIDELLAKTGVKP---RDIGILVVNSS----------------LFNPMP---------SLSAMVVNHYKLRGN 79 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~---~dId~ii~~s~----------------~~~~~p---------~~a~~v~~~lGl~~~ 79 (311)
...|+..|+++||+++|+++ ++++.++.++. +.+..| ..+.+++..+|+.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 56799999999999999864 44544443221 011111 2467788999996
Q ss_pred cceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----------------------CccCCCccchhhh
Q 041111 80 ILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----------------------WYAGNDRSMLLTN 136 (311)
Q Consensus 80 ~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----------------------~~~~~dr~~~~~~ 136 (311)
.+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..... ..+|.|+.. .+
T Consensus 158 G~~~tv~-~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVG-GASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 5888899 699999999999999999999999999998632100 001233221 38
Q ss_pred eecccceEEEEEecCCCCCCC---CccceeeeeecccCC---CCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHH
Q 041111 137 CLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKGG---DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAV 209 (311)
Q Consensus 137 ~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~~---~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~ 209 (311)
+++||||+++||++.+..... ...++.+.....-+. ....- ..+.++.+++. .....+|||++..|..+...
T Consensus 235 ~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~-Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 235 FIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRR-AGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred eeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHH-cCCCHHHCCEEEccCCCCCC
Confidence 899999999999986532111 112344432221111 00100 12344555544 34447899999999999887
Q ss_pred HHHHHH-H-cCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC-----------------------CCCeE
Q 041111 210 LDEVEK-H-LKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR-----------------------KGDRT 261 (311)
Q Consensus 210 ~~~~~~-~-lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~-----------------------~Gd~v 261 (311)
.|.++. . ++.....+. ...+...+||+.+|+-.+.|... +++|.+. +-.++
T Consensus 314 ~D~~E~~al~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~ 392 (410)
T PRK07103 314 GDETELAALFASGLAHAW-INATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYA 392 (410)
T ss_pred CCHHHHHHHhcCCCCCCe-EECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEE
Confidence 655421 2 222111111 14556788999999988888654 3333321 12456
Q ss_pred EEEeechhHHHhhheee
Q 041111 262 WQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 262 ll~~~G~G~~~~a~llr 278 (311)
+.-+||-|.+-++++|+
T Consensus 393 l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 393 LSLSFGFGGINTALVLE 409 (410)
T ss_pred EEecccCCCceEEEEEe
Confidence 66677777776666665
No 92
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.49 E-value=1.1e-12 Score=124.67 Aligned_cols=245 Identities=12% Similarity=0.113 Sum_probs=160.2
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
+.+..+|+..|++++++ |++ ++||.|++++.... ....+..+...+|++..++.+.++ .+|+|++.|+..|.++|
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I 96 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFI 96 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHH
Confidence 45679999999999855 896 89999999975321 244455688999998679999999 69999999999999999
Q ss_pred hCCCCCeEEEEEeecccc-cC----------c---------------------------------------cCC------
Q 041111 105 QLPPNSCALVVSTENITM-NW----------Y---------------------------------------AGN------ 128 (311)
Q Consensus 105 ~ag~~~~vLvv~~e~~s~-~~----------~---------------------------------------~~~------ 128 (311)
++|..+.+|++++|.+|. ++ . .+.
T Consensus 97 ~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~ 176 (361)
T PRK06690 97 QGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEIL 176 (361)
T ss_pred HCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCcee
Confidence 999999999999999872 11 0 000
Q ss_pred ---------Cccc-----h----hh------------heecccceEEEEEecCCCCCC---CCccceeeeeecccCCCCc
Q 041111 129 ---------DRSM-----L----LT------------NCLFRLGGAAILLSNRSSDRR---RSKYELVHTLRTHKGGDDR 175 (311)
Q Consensus 129 ---------dr~~-----~----~~------------~~l~GDGAaA~vLs~~~~~~~---~~~~~l~~~~~~~~~~~~~ 175 (311)
-|.. + .+ +...+|||+|+||.+.+.... ..-.++.+...........
T Consensus 177 ~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~ 256 (361)
T PRK06690 177 SFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLP 256 (361)
T ss_pred cccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccc
Confidence 0000 0 01 123489999999998643211 1112344322111101111
Q ss_pred ch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchh---HhhHhhcCCcchhhHHHHHHHHHH
Q 041111 176 SF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPS---RMTLYRFGNTSSSCLWYKLAYFEA 251 (311)
Q Consensus 176 ~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s---~~~~~~~Gn~~sas~~~~L~~~~~ 251 (311)
.. .....+.++++ .....+|||++.+|+........+.+.+|+++++++.+ ....+.+|+++...++..+.++.+
T Consensus 257 ~~~~~~a~~~al~~-Agl~~~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 257 GTGPIFAVNKLLNE-MNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred hhHHHHHHHHHHHH-cCCCHHHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHH
Confidence 11 12333444443 33347899999999999999999999999998887521 112467788888888777777754
Q ss_pred hCCCCCCCeEE-EEeechhHHHhhheeeEe
Q 041111 252 KRRIRKGDRTW-QIAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 252 ~g~l~~Gd~vl-l~~~G~G~~~~a~llr~~ 280 (311)
+ .+.+.+ .+..|.|.. .+++++..
T Consensus 336 ~----~~~~g~~~~c~~gG~g-~a~~~e~~ 360 (361)
T PRK06690 336 E----DMKYGIATLGIGGGIG-LALLFEKV 360 (361)
T ss_pred h----CCCEEEEEEcccCcce-eEEEEEec
Confidence 3 233333 233344433 45666654
No 93
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.49 E-value=1.5e-12 Score=125.31 Aligned_cols=225 Identities=14% Similarity=0.063 Sum_probs=149.7
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCC--CCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFN--PMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLA 100 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~--~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A 100 (311)
.+++..+|+.+|+++||+++|++++|||.|+++++ +.. .....+..+...+|+. .++.++++ .+|+|++.||..|
T Consensus 18 ~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A 95 (389)
T PRK07516 18 DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAA 95 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHH
Confidence 35778999999999999999999999999998864 221 1111122344566876 68999999 6999999999999
Q ss_pred HHHHhCCCCCeEEEEEeecccc-------------c-----------Cc-------------------------------
Q 041111 101 KQLLQLPPNSCALVVSTENITM-------------N-----------WY------------------------------- 125 (311)
Q Consensus 101 ~~~i~ag~~~~vLvv~~e~~s~-------------~-----------~~------------------------------- 125 (311)
.++|++|.++++||+++|+++. . +.
T Consensus 96 ~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~ 175 (389)
T PRK07516 96 LDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHAN 175 (389)
T ss_pred HHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 9999999999999999998651 0 10
Q ss_pred ---cC-------CC-----------cc-----chhhheecccceEEEEEecCCCCCCC-Cccceeeeeecc----c-CCC
Q 041111 126 ---AG-------ND-----------RS-----MLLTNCLFRLGGAAILLSNRSSDRRR-SKYELVHTLRTH----K-GGD 173 (311)
Q Consensus 126 ---~~-------~d-----------r~-----~~~~~~l~GDGAaA~vLs~~~~~~~~-~~~~l~~~~~~~----~-~~~ 173 (311)
.| .+ +. +...+..++|||+|+||.+.+..... ...++.+..... + ..+
T Consensus 176 A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~~v~i~g~~~~~~~~~~~~~~ 255 (389)
T PRK07516 176 GVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQRAVRFRARAHVNDFLPLSRRD 255 (389)
T ss_pred hhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCCCEEEEEEEeccCcccccCCC
Confidence 00 00 00 11225567899999999986532111 112344432211 1 111
Q ss_pred Ccch--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc------------------ccchhHhhHhh
Q 041111 174 DRSF--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW------------------VMEPSRMTLYR 233 (311)
Q Consensus 174 ~~~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d------------------~~~~s~~~~~~ 233 (311)
...+ .....+.+++. ....++|||++-+|-.-....-...+.||+.++ +++.+--.+ -
T Consensus 256 ~~~~~~~~~a~~~a~~~-agl~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~l-a 333 (389)
T PRK07516 256 PLAFEGPRRAWQRALAQ-AGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLK-A 333 (389)
T ss_pred ccccHHHHHHHHHHHHH-cCCCHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcc-c
Confidence 1111 12333444433 333468999999999887777777899998864 343222223 4
Q ss_pred cCCcchhhHHHHHHHHHHh
Q 041111 234 FGNTSSSCLWYKLAYFEAK 252 (311)
Q Consensus 234 ~Gn~~sas~~~~L~~~~~~ 252 (311)
+||...|+-...+.++..+
T Consensus 334 ~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 334 KGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCCccHHHHHHHHHHHHH
Confidence 8999999999988888663
No 94
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.1e-12 Score=125.89 Aligned_cols=252 Identities=10% Similarity=0.054 Sum_probs=160.0
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC--CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL--FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~--~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|++++|+++|++++|||.+++++.. ....+..+.......|++..++.+.++ .+|+|++.++..|.+
T Consensus 23 ~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~ 101 (382)
T PRK07801 23 GVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHH
Confidence 36789999999999999999999999999988641 111233444444567776457888999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc-c----------------------CccC--------------------------------
Q 041111 103 LLQLPPNSCALVVSTENITM-N----------------------WYAG-------------------------------- 127 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~-~----------------------~~~~-------------------------------- 127 (311)
.|++|..+++||++.|.++. . |..+
T Consensus 102 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~ 181 (382)
T PRK07801 102 AVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALE 181 (382)
T ss_pred HHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999998885531 1 0000
Q ss_pred ---------CC----cc---------------------------------chhhheecccceEEEEEecCCCCCCC---C
Q 041111 128 ---------ND----RS---------------------------------MLLTNCLFRLGGAAILLSNRSSDRRR---S 158 (311)
Q Consensus 128 ---------~d----r~---------------------------------~~~~~~l~GDGAaA~vLs~~~~~~~~---~ 158 (311)
.. +. +...+...+|||+|+||.+.+..... .
T Consensus 182 ~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~ 261 (382)
T PRK07801 182 SHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTP 261 (382)
T ss_pred HHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCc
Confidence 00 00 00012334699999999976432111 1
Q ss_pred ccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCc
Q 041111 159 KYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNT 237 (311)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~ 237 (311)
..++.+............. .....+.+++. .....+|||++=+|-.-.-..-.+.+.||+.+++++.+--. --+||.
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~-agi~~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~-l~~Ghp 339 (382)
T PRK07801 262 RARIHHLSVRGDDPVFMLTAPIPATRYALEK-TGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGA-IALGHP 339 (382)
T ss_pred cEEEEEEEEecCChHhhccChHHHHHHHHHH-cCCCHHHcCEeeecccchHHHHHHHHHhCCCchhcCCCcch-hhhcCc
Confidence 1234432111000000000 12233444443 33347899999999877777777789999998887642222 347999
Q ss_pred chhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 238 SSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 238 ~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
..|+-...+.++.++=+-+.+.+.+....|.|....++++++
T Consensus 340 ~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 340 LGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceeEEEEEe
Confidence 999999888888765221234445444455555555566653
No 95
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.47 E-value=1.1e-12 Score=127.09 Aligned_cols=244 Identities=12% Similarity=0.054 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecC-C-----------------C--------CCC-cHHHHHHHHcCC
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIG----ILVVNSSL-F-----------------N--------PMP-SLSAMVVNHYKL 76 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId----~ii~~s~~-~-----------------~--------~~p-~~a~~v~~~lGl 76 (311)
...++..|+++||+++|+++++.+ +|+++++. . . ..+ ..+.+++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 456888999999999999765443 46666531 0 0 011 367889999999
Q ss_pred CCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C----------------ccCCCccchhh
Q 041111 77 RGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W----------------YAGNDRSMLLT 135 (311)
Q Consensus 77 ~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~----------------~~~~dr~~~~~ 135 (311)
+ .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..... | .+|.|+.. .
T Consensus 154 ~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 R--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred C--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 7 5899999 799999999999999999999999999999975311 0 01333322 3
Q ss_pred heecccceEEEEEecCCCCCCC---Cccceeeeeecc----cCCCCcch--HHHHHHHhhccchhhHHHhhhhhhccCCC
Q 041111 136 NCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTH----KGGDDRSF--GRKIFKMKIKPYIPNFKLAFEHICIRTGG 206 (311)
Q Consensus 136 ~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~----~~~~~~~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s 206 (311)
+++.||||+++||++.+..... ...++.+..... +...+..- ....++.+++. ....++|||++-.|..+
T Consensus 229 G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~-agi~~~did~ie~hgtg 307 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRD-AGVTGEQIGYVNAHGTS 307 (414)
T ss_pred ceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCHHHcCEEEccCcc
Confidence 8899999999999986542211 112333332111 11111110 13345555554 44457899999999998
Q ss_pred hHHHHHH-----HHHcCCC-ccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCCC--------------------
Q 041111 207 RAVLDEV-----EKHLKLN-EWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIRK-------------------- 257 (311)
Q Consensus 207 ~~~~~~~-----~~~lgi~-~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~-------------------- 257 (311)
....|.+ .+.||-. ..++. ...+...+||+.+|+-.+.|... +++|.+.|
T Consensus 308 t~~~D~~E~~al~~~fg~~~~~~~~-v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~ 386 (414)
T PRK08722 308 TPAGDVAEIKGIKRALGEAGSKQVL-VSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTA 386 (414)
T ss_pred CCCCCHHHHHHHHHHhcccCCCCce-eeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCcc
Confidence 8776544 4566632 12221 14667899999999887776433 44433221
Q ss_pred -----CCeEEEEeechhHHHhhheee
Q 041111 258 -----GDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 258 -----Gd~vll~~~G~G~~~~a~llr 278 (311)
-++++.-+||-|.+-++++|+
T Consensus 387 ~~~~~~~~~l~nsfGfGG~n~~lvl~ 412 (414)
T PRK08722 387 RKVESMEYAICNSFGFGGTNGSLIFK 412 (414)
T ss_pred ccCCCCCEEEEecccCCCceEEEEEe
Confidence 244566667777666666665
No 96
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.46 E-value=1.7e-12 Score=126.20 Aligned_cols=248 Identities=13% Similarity=0.058 Sum_probs=158.6
Q ss_pred hcHHHHHHHHHHHHHHHcCCC-CCCcCE----EEEEecC-CC--------------------------CCCcHHHHHHHH
Q 041111 26 KETESVIIGAIDELLAKTGVK-PRDIGI----LVVNSSL-FN--------------------------PMPSLSAMVVNH 73 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~-~~dId~----ii~~s~~-~~--------------------------~~p~~a~~v~~~ 73 (311)
....+|+..|+++||+++|++ +++++. ++++++. .. .....+.+++..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 345789999999999999998 666653 4444321 10 001246778889
Q ss_pred cCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc---------------C-------ccCCCcc
Q 041111 74 YKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN---------------W-------YAGNDRS 131 (311)
Q Consensus 74 lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~---------------~-------~~~~dr~ 131 (311)
+|+. .+.+.+. .+|+|++.||..|..+|++|..+.+||+++|..... + .++.|++
T Consensus 155 ~~l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~ 231 (421)
T PTZ00050 155 HKLK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKD 231 (421)
T ss_pred hCCC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCC
Confidence 9996 5889999 699999999999999999999999999999974210 0 0122322
Q ss_pred chhhheecccceEEEEEecCCCCCCC-Cc--cceeeeeecccC----CC-Ccch-HHHHHHHhhccchhhHHHhhhhhhc
Q 041111 132 MLLTNCLFRLGGAAILLSNRSSDRRR-SK--YELVHTLRTHKG----GD-DRSF-GRKIFKMKIKPYIPNFKLAFEHICI 202 (311)
Q Consensus 132 ~~~~~~l~GDGAaA~vLs~~~~~~~~-~~--~~l~~~~~~~~~----~~-~~~~-g~~~~~~a~~~~~~~~~~did~v~~ 202 (311)
. .+++.||||+++||++.+..... .. .++.+.....-+ .. ...- -.+.++.+++.......+|||++-+
T Consensus 232 ~--~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~ 309 (421)
T PTZ00050 232 R--AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNA 309 (421)
T ss_pred C--CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEEC
Confidence 1 37889999999999986542111 11 133333221111 11 1100 1234444443212233689999999
Q ss_pred cCCChHHHH-----HHHHHcCCCc-cccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCCC----------------
Q 041111 203 RTGGRAVLD-----EVEKHLKLNE-WVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIRK---------------- 257 (311)
Q Consensus 203 h~~s~~~~~-----~~~~~lgi~~-d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~---------------- 257 (311)
|..+....| .+.+.++-.. +.+. ...+...+||+.+|+-.+.|... ++++.+.|
T Consensus 310 hgtgt~~~D~~E~~al~~~~~~~~~~~~~-v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~ 388 (421)
T PTZ00050 310 HATSTPIGDKIELKAIKKVFGDSGAPKLY-VSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLV 388 (421)
T ss_pred CCccCCCCCHHHHHHHHHHhccccCCCce-EECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCcccc
Confidence 998876553 4455665321 2221 14666799999999988887655 34443311
Q ss_pred ----------CCeEEEEeechhHHHhhheeeE
Q 041111 258 ----------GDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 258 ----------Gd~vll~~~G~G~~~~a~llr~ 279 (311)
=.++|.-+||-|.+-++++|+.
T Consensus 389 ~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 389 QGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 1567788888888888888763
No 97
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=2.5e-12 Score=124.28 Aligned_cols=223 Identities=15% Similarity=0.054 Sum_probs=144.5
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCC-----CcHHHHHHHHcCCCCCcceeeecCCccchHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPM-----PSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISI 97 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~-----p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al 97 (311)
.+++..+|+.+|+++||+++|++++|||.||+++. +++.. +..... ...++. ..++++++ .+|+|+..||
T Consensus 22 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~~-g~~~~~v~-~~Casg~~al 97 (403)
T PRK06289 22 EGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPALW-GVPASRHE-AACASGSVAT 97 (403)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcCC-CCceeecc-cccHHHHHHH
Confidence 46888999999999999999999999999998864 33211 221121 233554 35789999 6999999999
Q ss_pred HHHHHHHhCCCCCeEEEEEeeccccc-----------------------Cc-----------------------------
Q 041111 98 DLAKQLLQLPPNSCALVVSTENITMN-----------------------WY----------------------------- 125 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~s~~-----------------------~~----------------------------- 125 (311)
..|..+|++|.+++|||+++|+++.. +.
T Consensus 98 ~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~ 177 (403)
T PRK06289 98 LAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEI 177 (403)
T ss_pred HHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999999999999986410 00
Q ss_pred -------cC----CC---------cc-----------chhhheecccceEEEEEecCCCCCCC----Cccceeeeeec--
Q 041111 126 -------AG----ND---------RS-----------MLLTNCLFRLGGAAILLSNRSSDRRR----SKYELVHTLRT-- 168 (311)
Q Consensus 126 -------~~----~d---------r~-----------~~~~~~l~GDGAaA~vLs~~~~~~~~----~~~~l~~~~~~-- 168 (311)
.| .. ++ +...+...+|||+|+||.+.+..... ....+.+....
T Consensus 178 ~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~ 257 (403)
T PRK06289 178 NFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTA 257 (403)
T ss_pred HHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecc
Confidence 00 00 00 11124455799999999986532111 11345543321
Q ss_pred ccC--C-------CCcch--HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc---------------
Q 041111 169 HKG--G-------DDRSF--GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW--------------- 222 (311)
Q Consensus 169 ~~~--~-------~~~~~--g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d--------------- 222 (311)
+.. . +...+ .+...+.++++ ....++|||.+-+|..-....-...+.+|+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~-Agi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~ 336 (403)
T PRK06289 258 PLGLEQKLDRSAGDPYVLPHVRQAVLDAYRR-AGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336 (403)
T ss_pred ccccccccccccccccccHHHHHHHHHHHHH-cCCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccC
Confidence 111 0 01111 12233334333 333478999999999887777777899998763
Q ss_pred ---ccchhHhhHhhcCCcchhhHHHHHHHHHHh
Q 041111 223 ---VMEPSRMTLYRFGNTSSSCLWYKLAYFEAK 252 (311)
Q Consensus 223 ---~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~ 252 (311)
+++.+--.+ -+||...++-+..+.++..+
T Consensus 337 G~lpvN~~GG~l-a~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 337 GRLPINPSGGLI-GGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred CCeeEcCCCCcc-ccCCCccchHHHHHHHHHHH
Confidence 343211111 26999988888888888664
No 98
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.46 E-value=1.8e-12 Score=125.12 Aligned_cols=214 Identities=14% Similarity=0.075 Sum_probs=142.2
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecC-C-----------------CCC---------CcHHHHHHHHc
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIG----ILVVNSSL-F-----------------NPM---------PSLSAMVVNHY 74 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~~-~-----------------~~~---------p~~a~~v~~~l 74 (311)
.....|+..|+++||+++|+++++++ +|+++++. . ... ...+.+++..+
T Consensus 69 d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (399)
T cd00832 69 DRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH 148 (399)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh
Confidence 33567899999999999999876554 46666431 0 000 12457889999
Q ss_pred CCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C---------------ccCCCccchh
Q 041111 75 KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W---------------YAGNDRSMLL 134 (311)
Q Consensus 75 Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~---------------~~~~dr~~~~ 134 (311)
|+. .+.+.+. .+|+|++.||..|.++|++|. +.+||+++|..... | .+|.|++.
T Consensus 149 gl~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~-- 222 (399)
T cd00832 149 GMR--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA-- 222 (399)
T ss_pred CCC--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--
Confidence 997 5889999 699999999999999999999 99999999874310 0 11233322
Q ss_pred hheecccceEEEEEecCCCCCCC--C-ccceeeeeecccCCCCcch---HHHHHHHhhccchhhHHHhhhhhhccCCChH
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRR--S-KYELVHTLRTHKGGDDRSF---GRKIFKMKIKPYIPNFKLAFEHICIRTGGRA 208 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~--~-~~~l~~~~~~~~~~~~~~~---g~~~~~~a~~~~~~~~~~did~v~~h~~s~~ 208 (311)
.++++|+||+++||++.+..... . ..++.+......+...... -.+.++.+++. .....+|||++..|..+..
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~-ag~~~~~i~~v~~hgtgt~ 301 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALAD-AGLTPEDVDVVFADAAGVP 301 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHH-cCCCHHHccEEEeccCcCC
Confidence 38999999999999986543211 1 1233443222211110011 13445555554 4445789999999999877
Q ss_pred HHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 209 VLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 209 ~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
..|. +.+.||-..-.+ ..+...+||+.+|+-.+.|...
T Consensus 302 ~~D~~E~~al~~~fg~~~~pv---~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 302 ELDRAEAAALAAVFGPRGVPV---TAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred CCCHHHHHHHHHHhCCCCCce---eCCCchhcchHHHHHHHHHHHH
Confidence 7654 456666321123 4666789999999998888654
No 99
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.45 E-value=2e-12 Score=125.70 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=84.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++|+++++||.+++++.. ....+.++..+....|++..++.+.|+ .+|+|++.|+..|.++
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~ 106 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAES 106 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHH
Confidence 56789999999999999999999999999999752 222345667777778998678999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc
Q 041111 104 LQLPPNSCALVVSTENIT 121 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s 121 (311)
|++|.++.+|++++|++|
T Consensus 107 I~sG~~dvvla~G~E~mS 124 (430)
T TIGR02446 107 IMAGAIDIGIAGGADSSS 124 (430)
T ss_pred HHCCCCCEEEEeeeEccc
Confidence 999999999999999997
No 100
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.45 E-value=9e-13 Score=127.37 Aligned_cols=240 Identities=15% Similarity=0.192 Sum_probs=157.9
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEec-CC------------------C--------CC-CcHHHHHHHHc
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIG----ILVVNSS-LF------------------N--------PM-PSLSAMVVNHY 74 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~-~~------------------~--------~~-p~~a~~v~~~l 74 (311)
....++..|+++||+++|+++.+.+ +|+++++ .. . .. ...+.+++..+
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 3557889999999999999765433 3555542 10 0 01 13567899999
Q ss_pred CCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc----C-----------------ccCCCccch
Q 041111 75 KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN----W-----------------YAGNDRSML 133 (311)
Q Consensus 75 Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~----~-----------------~~~~dr~~~ 133 (311)
|++ .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..+.. | .+|.|++.
T Consensus 150 ~l~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r- 225 (406)
T PRK07967 150 KIK--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR- 225 (406)
T ss_pred CCC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC-
Confidence 997 5889999 799999999999999999999999999999865310 1 02333322
Q ss_pred hhheecccceEEEEEecCCCCCCC-C--ccceeeeeecccCC----CC-cchHHHHHHHhhccchhhHHHhhhhhhccCC
Q 041111 134 LTNCLFRLGGAAILLSNRSSDRRR-S--KYELVHTLRTHKGG----DD-RSFGRKIFKMKIKPYIPNFKLAFEHICIRTG 205 (311)
Q Consensus 134 ~~~~l~GDGAaA~vLs~~~~~~~~-~--~~~l~~~~~~~~~~----~~-~~~g~~~~~~a~~~~~~~~~~did~v~~h~~ 205 (311)
.+++.||||+++||++.+..... . -.++.+...+.-+. .+ .. -.+.++.+++. ++ .|||+|..|..
T Consensus 226 -~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~-~~~a~~~Al~~-~~---~~Idyi~aHgt 299 (406)
T PRK07967 226 -DGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEG-AVRCMQMALAT-VD---TPIDYINTHGT 299 (406)
T ss_pred -CceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHH-HHHHHHHHHhC-CC---CCccEEEcCCC
Confidence 38899999999999986532111 1 12344433222111 01 11 13455666654 33 39999999999
Q ss_pred ChHHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHH---HHHhCCCCC--------------------
Q 041111 206 GRAVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAY---FEAKRRIRK-------------------- 257 (311)
Q Consensus 206 s~~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~-------------------- 257 (311)
+.+..|. +.+.||-..-.+ ..+...+||+.+|+-.+.+.. .++++.+.|
T Consensus 300 GT~~~D~~E~~Ai~~~fg~~~~~v---~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~ 376 (406)
T PRK07967 300 STPVGDVKELGAIREVFGDKSPAI---SATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTET 376 (406)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCee---ECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCC
Confidence 9887654 456676322123 567789999999988776532 233333211
Q ss_pred -----CCeEEEEeechhHHHhhheeeE
Q 041111 258 -----GDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 258 -----Gd~vll~~~G~G~~~~a~llr~ 279 (311)
-++++.-+||-|.+-++++|+.
T Consensus 377 ~~~~~~~~~l~~sfgfGG~n~~lvl~~ 403 (406)
T PRK07967 377 TDNAELTTVMSNSFGFGGTNATLVFRR 403 (406)
T ss_pred CcCCCCCEEEEecccCCCeeEEEEEEe
Confidence 2457777888888878888775
No 101
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.45 E-value=3.3e-12 Score=122.71 Aligned_cols=251 Identities=10% Similarity=-0.010 Sum_probs=163.0
Q ss_pred hhcHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAK-TGVKPRDIGILVVNSSLF-NP-MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~-agl~~~dId~ii~~s~~~-~~-~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+....+|+.++++++|++ +|+++++||.+++++... .. .+..+..+...+|++.+++.+.|+ .+|+|++.|+..|.
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~ 102 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAA 102 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHH
Confidence 566789999999999996 799999999999997532 22 244567788899998568999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-cC------------------c--------------------------------c--C-
Q 041111 102 QLLQLPPNSCALVVSTENITM-NW------------------Y--------------------------------A--G- 127 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~~------------------~--------------------------------~--~- 127 (311)
.+|++|..+.+|+++.|++|. ++ . . +
T Consensus 103 ~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~ 182 (387)
T PRK08947 103 RAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQE 182 (387)
T ss_pred HHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999998862 10 0 0 0
Q ss_pred -----------------------CC---cc-----c----------------hhhheecccceEEEEEecCCCCCCC---
Q 041111 128 -----------------------ND---RS-----M----------------LLTNCLFRLGGAAILLSNRSSDRRR--- 157 (311)
Q Consensus 128 -----------------------~d---r~-----~----------------~~~~~l~GDGAaA~vLs~~~~~~~~--- 157 (311)
.| |. . ...+..++|||+|+||.+.+.....
T Consensus 183 g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~ 262 (387)
T PRK08947 183 GRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLK 262 (387)
T ss_pred CCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceEEEEEccHHHHHHCCCC
Confidence 01 00 0 0114466899999999986432111
Q ss_pred CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCc---cccchhHhhHhh
Q 041111 158 SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNE---WVMEPSRMTLYR 233 (311)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~---d~~~~s~~~~~~ 233 (311)
...++.+............+ .....+.+++. .+..++|||++=+|-.-.-..-.+.+.||+.+ ++++.+-- .--
T Consensus 263 p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~-Agl~~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG-~la 340 (387)
T PRK08947 263 PRARIRSMAVAGCDPSIMGYGPVPATQKALKR-AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGG-AIA 340 (387)
T ss_pred ccEEEEEEEEcCcCcccccccHHHHHHHHHHH-cCCCHHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCc-hhh
Confidence 11344443222110111111 12233333333 33346899999999987666677788999843 56643222 234
Q ss_pred cCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheee
Q 041111 234 FGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 234 ~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr 278 (311)
+||..+|+-...+.+++++-+-+.+.+.+.-..|.|....+++|+
T Consensus 341 ~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G~g~a~~~e 385 (387)
T PRK08947 341 LGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFE 385 (387)
T ss_pred cCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeecccceeEEEEE
Confidence 799988888877777766532233445554444433333445554
No 102
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.45 E-value=1.4e-12 Score=124.98 Aligned_cols=237 Identities=14% Similarity=0.109 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHcCCCC--CCcCEEEEEecCC---------------------C--------CCC-cHHHHHHHHcCCCC
Q 041111 31 VIIGAIDELLAKTGVKP--RDIGILVVNSSLF---------------------N--------PMP-SLSAMVVNHYKLRG 78 (311)
Q Consensus 31 la~~A~~~aL~~agl~~--~dId~ii~~s~~~---------------------~--------~~p-~~a~~v~~~lGl~~ 78 (311)
++..|+++||+++|+++ +++ +|+++++.. . .+| ..+..++..+|+.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC-
Confidence 56689999999999975 333 455555210 0 011 2467789999997
Q ss_pred CcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeec-ccc-c---C----------ccCCCccchhhheecccce
Q 041111 79 NILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTEN-ITM-N---W----------YAGNDRSMLLTNCLFRLGG 143 (311)
Q Consensus 79 ~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~-~s~-~---~----------~~~~dr~~~~~~~l~GDGA 143 (311)
.+.+.+. .+|+|++.||..|.++|++|..+.+||+++|. .+. . | .+|.|+.. .++++||||
T Consensus 137 -Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v~gEGa 212 (381)
T PRK05952 137 -GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLVLGEGG 212 (381)
T ss_pred -Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCccccccE
Confidence 5889999 69999999999999999999999999999996 321 0 1 02334322 388999999
Q ss_pred EEEEEecCCCCCCC---CccceeeeeecccC----CCCcc--hHHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHH-
Q 041111 144 AAILLSNRSSDRRR---SKYELVHTLRTHKG----GDDRS--FGRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEV- 213 (311)
Q Consensus 144 aA~vLs~~~~~~~~---~~~~l~~~~~~~~~----~~~~~--~g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~- 213 (311)
+++||++.+..... ...++.+......+ ..+.. --.+.++.+++. ....++|||++..|..+.+..|.+
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~-agi~p~dId~i~~hgtgt~~~D~~E 291 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR-SGLTPEDIDYIHAHGTATRLNDQRE 291 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCHHHeeEEEccCCCCCCCcHHH
Confidence 99999986532111 11244443322211 11111 013344444443 333468999999999998876544
Q ss_pred ----HHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCCC---------------------CCeEEEEe
Q 041111 214 ----EKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIRK---------------------GDRTWQIA 265 (311)
Q Consensus 214 ----~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~---------------------Gd~vll~~ 265 (311)
.+.++- .-.+ ..+...+||+.+|+-.+.+... ++++.+.| =++++..+
T Consensus 292 ~~al~~~fg~-~~~v---~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s 367 (381)
T PRK05952 292 ANLIQALFPH-RVAV---SSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLS 367 (381)
T ss_pred HHHHHHHcCC-CCee---ecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEee
Confidence 455552 1122 4677899999999988777654 44554433 15667778
Q ss_pred echhHHHhhheee
Q 041111 266 FGSGFKCNSAVWR 278 (311)
Q Consensus 266 ~G~G~~~~a~llr 278 (311)
||-|..-++++|+
T Consensus 368 ~gfGG~na~lvl~ 380 (381)
T PRK05952 368 FGFGGQNAAIALG 380 (381)
T ss_pred ecCCCeeEEEEEe
Confidence 8887777777765
No 103
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.44 E-value=5e-12 Score=121.42 Aligned_cols=252 Identities=10% Similarity=-0.014 Sum_probs=162.7
Q ss_pred hhcHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAK-TGVKPRDIGILVVNSSLF-NP-MPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~-agl~~~dId~ii~~s~~~-~~-~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+.++.+|+.+|++++|++ +|++|++||.+++++... .. .+..+..+....|++..++.+.|+ .+|+|++.|+..|.
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa 100 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAA 100 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHH
Confidence 567789999999999996 599999999999997532 11 234666777788988668999999 69999999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc-cC------------------c--------------------------------c----
Q 041111 102 QLLQLPPNSCALVVSTENITM-NW------------------Y--------------------------------A---- 126 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~-~~------------------~--------------------------------~---- 126 (311)
+.|++|..+.+|++++|++|. ++ . .
T Consensus 101 ~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~ 180 (385)
T TIGR02445 101 RAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQE 180 (385)
T ss_pred HHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999998861 10 0 0
Q ss_pred ----C------------------CC---cc---------------------chhhheecccceEEEEEecCCCCCCC---
Q 041111 127 ----G------------------ND---RS---------------------MLLTNCLFRLGGAAILLSNRSSDRRR--- 157 (311)
Q Consensus 127 ----~------------------~d---r~---------------------~~~~~~l~GDGAaA~vLs~~~~~~~~--- 157 (311)
. .| |. +...+...+|||+|+||.+.+.....
T Consensus 181 g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~ 260 (385)
T TIGR02445 181 GKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLK 260 (385)
T ss_pred CCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEEEecHHHHHHCCCC
Confidence 0 00 10 01124456899999999985432111
Q ss_pred CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCc---cccchhHhhHhh
Q 041111 158 SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNE---WVMEPSRMTLYR 233 (311)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~---d~~~~s~~~~~~ 233 (311)
...++.+............+ .....+.+++. ....++|||++=+|-.-.-..-.+.+.||+.+ ++++.+--. --
T Consensus 261 ~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~-AGi~p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG~-la 338 (385)
T TIGR02445 261 PRARIRSMAVAGCDPSIMGYGPVPATQKALKR-AGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGA-IA 338 (385)
T ss_pred eeEEEEEEEEcCCCCcccchhHHHHHHHHHHH-cCCCHHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCch-hh
Confidence 11234443221111111111 12223333333 33346899999999877666666778999843 566532222 23
Q ss_pred cCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhheeeE
Q 041111 234 FGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 234 ~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+||...|+-...+.++++.-+-+.+.+.|....|.|..-.+++|++
T Consensus 339 ~GhP~GATG~r~v~~l~~~l~~~~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 339 LGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred cCCCccccHHHHHHHHHHHHHhcCCCeEEEEEecccChhheEEEEe
Confidence 7998888877777766653221345556655555455555677764
No 104
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.42 E-value=4.6e-12 Score=122.48 Aligned_cols=241 Identities=13% Similarity=0.071 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCcC----EEEEEecC-C-----------------C--------CCC-cHHHHHHHHcC
Q 041111 28 TESVIIGAIDELLAKTGVKP-RDIG----ILVVNSSL-F-----------------N--------PMP-SLSAMVVNHYK 75 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~-~dId----~ii~~s~~-~-----------------~--------~~p-~~a~~v~~~lG 75 (311)
...|+..|+++||+++|++. ..++ +|+++++. . . .+| ..+.+++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 45689999999999999843 2222 56666421 0 0 112 25778899999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc----cC----------------ccCCCccchhh
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM----NW----------------YAGNDRSMLLT 135 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~----~~----------------~~~~dr~~~~~ 135 (311)
+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..+. .| .+|.|++. .
T Consensus 153 ~~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~ 227 (405)
T PRK09116 153 LK--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--D 227 (405)
T ss_pred CC--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--C
Confidence 97 5899999 69999999999999999999999999999997431 00 12233322 3
Q ss_pred heecccceEEEEEecCCCCCCC---CccceeeeeecccC----CCCcchHHHHHHHhhccchhhHHHhhhhhhccCCChH
Q 041111 136 NCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKG----GDDRSFGRKIFKMKIKPYIPNFKLAFEHICIRTGGRA 208 (311)
Q Consensus 136 ~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~----~~~~~~g~~~~~~a~~~~~~~~~~did~v~~h~~s~~ 208 (311)
++++||||+++||++.+..... ...++.+.....-+ ..+..--.+.++.+++. ....++|||+|.+|..+..
T Consensus 228 G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~-Agi~p~dId~I~~Hgtgt~ 306 (405)
T PRK09116 228 GLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKD-AGLAPEDIGYVNAHGTATD 306 (405)
T ss_pred CEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHH-hCCCHHHcCEEECcCccCC
Confidence 8999999999999975432111 11234443221111 10100012344444443 3344789999999998886
Q ss_pred HHH-----HHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC------------------------
Q 041111 209 VLD-----EVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR------------------------ 256 (311)
Q Consensus 209 ~~~-----~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~------------------------ 256 (311)
..| .+.+.+|- .-.+ ..+...+||+.+|+-.+.+... +++|.+.
T Consensus 307 ~~D~~E~~Ai~~~fg~-~~pv---~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~ 382 (405)
T PRK09116 307 RGDIAESQATAAVFGA-RMPI---SSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEARE 382 (405)
T ss_pred CCCHHHHHHHHHHhCC-CCee---ECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCcc
Confidence 654 34566662 1123 4677899999888766555433 2333221
Q ss_pred -CCCeEEEEeechhHHHhhheee
Q 041111 257 -KGDRTWQIAFGSGFKCNSAVWR 278 (311)
Q Consensus 257 -~Gd~vll~~~G~G~~~~a~llr 278 (311)
+.+++|..+||-|..-++++|+
T Consensus 383 ~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 383 IDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCEEEEeeecCCcccEEEEEC
Confidence 2356788888988877777764
No 105
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.42 E-value=3.8e-12 Score=126.64 Aligned_cols=243 Identities=13% Similarity=0.047 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC---cC----EEEEEecCC---------------------C----CCC-cHHHHHHHHc
Q 041111 28 TESVIIGAIDELLAKTGVKPRD---IG----ILVVNSSLF---------------------N----PMP-SLSAMVVNHY 74 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~d---Id----~ii~~s~~~---------------------~----~~p-~~a~~v~~~l 74 (311)
...++..|+++||+++|++++. ++ +|+++++.. + ..+ ..+..++..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 4468889999999999997642 22 566665310 0 011 2356788899
Q ss_pred CCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C----------------ccCCCccch
Q 041111 75 KLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W----------------YAGNDRSML 133 (311)
Q Consensus 75 Gl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~----------------~~~~dr~~~ 133 (311)
|+. .+.+.+. .+|+|+..||..|.++|++|..+.+||+++|..... | .+|.|++.
T Consensus 279 gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r- 354 (540)
T PLN02787 279 GWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR- 354 (540)
T ss_pred CCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC-
Confidence 996 6899999 699999999999999999999999999999963210 0 12334322
Q ss_pred hhheecccceEEEEEecCCCCCCC--Cc-cceeeeeec----ccCC-CCcch-HHHHHHHhhccchhhHHHhhhhhhccC
Q 041111 134 LTNCLFRLGGAAILLSNRSSDRRR--SK-YELVHTLRT----HKGG-DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRT 204 (311)
Q Consensus 134 ~~~~l~GDGAaA~vLs~~~~~~~~--~~-~~l~~~~~~----~~~~-~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~ 204 (311)
.++++|+||+++||++.+..... .. .++.+...+ ++.. +...- -...++.+++. ....++|||+|..|.
T Consensus 355 -dGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~-AGl~p~dIdyInaHG 432 (540)
T PLN02787 355 -DGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQ-SGVSKEDVNYINAHA 432 (540)
T ss_pred -CCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHH-cCCCHHHCcEEEccC
Confidence 38999999999999985532111 11 234443221 1111 11100 12345666655 455579999999999
Q ss_pred CChHHHHH-----HHHHcCCCc-cccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCCC------------------
Q 041111 205 GGRAVLDE-----VEKHLKLNE-WVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIRK------------------ 257 (311)
Q Consensus 205 ~s~~~~~~-----~~~~lgi~~-d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~------------------ 257 (311)
.+.+..|. +.+.||-.+ -.+ ..+...+||+.+|+-.+.+... +++|.+.|
T Consensus 433 TGT~~gD~~E~~Ai~~~Fg~~~~~pV---~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~ 509 (540)
T PLN02787 433 TSTKAGDLKEYQALMRCFGQNPELRV---NSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVG 509 (540)
T ss_pred ccCCCCCHHHHHHHHHHhCCCCCcee---eCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccc
Confidence 99877654 455676322 123 4677899999999877666543 44444321
Q ss_pred -------CCeEEEEeechhHHHhhheeeE
Q 041111 258 -------GDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 258 -------Gd~vll~~~G~G~~~~a~llr~ 279 (311)
-+.+|.-+||-|..-++++|+.
T Consensus 510 ~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 510 PKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred cccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 1345666778777777777764
No 106
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.42 E-value=7.4e-12 Score=120.58 Aligned_cols=216 Identities=19% Similarity=0.103 Sum_probs=144.8
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEec-CC------C-------------------------------CCC
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIG----ILVVNSS-LF------N-------------------------------PMP 64 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~-~~------~-------------------------------~~p 64 (311)
....|+..|+++||+++|++..+.+ .|+++++ .. . ..+
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 3567899999999999999653322 3455543 11 0 011
Q ss_pred -cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C-----c-----cC-
Q 041111 65 -SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W-----Y-----AG- 127 (311)
Q Consensus 65 -~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~-----~-----~~- 127 (311)
..+.+++..+|+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..... | . .|
T Consensus 152 n~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 2467789999997 5899999 699999999999999999999999999999863210 0 0 01
Q ss_pred CCc---cchhhheecccceEEEEEecCCCCCCC--Ccc-ceeeeeecccCCCCcchHHHHHHHhhccchhhHHHhhhhhh
Q 041111 128 NDR---SMLLTNCLFRLGGAAILLSNRSSDRRR--SKY-ELVHTLRTHKGGDDRSFGRKIFKMKIKPYIPNFKLAFEHIC 201 (311)
Q Consensus 128 ~dr---~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~-~l~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~~~did~v~ 201 (311)
.|+ +. .+++.|+||+++||++.+..... ..| ++.+......+.+... -.+.++.+++. ... .+|||+|.
T Consensus 229 ~d~~~~~r--~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~~~~~~-~~~am~~AL~~-Agl-~~~IdyI~ 303 (398)
T PRK06519 229 WSRGGEDG--GGFILGSGGAFLVLESREHAEARGARPYARISGVESDRARRAPGD-LEASLERLLKP-AGG-LAAPTAVI 303 (398)
T ss_pred hccCccCC--CCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCCCChHH-HHHHHHHHHHH-CCC-cccCCEEE
Confidence 222 11 38999999999999986642211 112 4444321111111111 24566777665 444 58999999
Q ss_pred ccCCChHHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC
Q 041111 202 IRTGGRAVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR 256 (311)
Q Consensus 202 ~h~~s~~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~ 256 (311)
.|..+.+..|. +.+.|++| + ..+...+||+.+|+-.+.+.-. +++|.+.
T Consensus 304 ahgtgT~~~D~~E~~Ai~~~f~~p---v---sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vp 360 (398)
T PRK06519 304 SGATGAHPATAEEKAALEAALAGP---V---RGIGTLFGHTMEAQFPLGLALAALSVSKGALF 360 (398)
T ss_pred eCCCCCCCccHHHHHHHHHHcCCC---c---cccchhhccchHHHHHHHHHHHHHHHhcCccC
Confidence 99999877654 45667754 3 5678899999999988777543 5556543
No 107
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.42 E-value=8.6e-12 Score=120.34 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=81.3
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-NPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+.+..+|+.+|++++|+++||+++|||.|++++... +........+++.+|++ ..+.+.++ .+|+++..++..|..
T Consensus 23 ~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~ 100 (398)
T PRK06157 23 WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVY 100 (398)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHH
Confidence 3567899999999999999999999999999886422 21122236688899998 47889999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
.|++|..+.+||+++|+++
T Consensus 101 ~I~sG~~d~vlv~G~e~~s 119 (398)
T PRK06157 101 AVASGAYDIALALGVEKLK 119 (398)
T ss_pred HHHCCCCCEEEEEEEeecc
Confidence 9999999999999999864
No 108
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.41 E-value=3.4e-12 Score=120.62 Aligned_cols=242 Identities=10% Similarity=0.037 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCcCEEEEEec-CC-----------------CCCC---------cHHHHHHHHcCCCC
Q 041111 28 TESVIIGAIDELLAKTGV--KPRDIGILVVNSS-LF-----------------NPMP---------SLSAMVVNHYKLRG 78 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl--~~~dId~ii~~s~-~~-----------------~~~p---------~~a~~v~~~lGl~~ 78 (311)
...++..|++++++++|+ +++++. |+++++ .. ..-| ..+.+++..+|++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTA-TIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEE-EEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC-
Confidence 456888999999999996 455554 444542 11 0011 3567889999997
Q ss_pred CcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C-----------------ccCCCccchhhh
Q 041111 79 NILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W-----------------YAGNDRSMLLTN 136 (311)
Q Consensus 79 ~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~-----------------~~~~dr~~~~~~ 136 (311)
.+.+.+. .+|+|++.||..|.++|+.|..+.+||+++|..... | .+|.|++. .+
T Consensus 82 -Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G 157 (342)
T PRK14691 82 -GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DG 157 (342)
T ss_pred -CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CC
Confidence 5889999 699999999999999999999999999999874210 0 02333322 38
Q ss_pred eecccceEEEEEecCCCCCC---CCccceeeeeecccC----C-CCcch-HHHHHHHhhccchhhHHHhhhhhhccCCCh
Q 041111 137 CLFRLGGAAILLSNRSSDRR---RSKYELVHTLRTHKG----G-DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGR 207 (311)
Q Consensus 137 ~l~GDGAaA~vLs~~~~~~~---~~~~~l~~~~~~~~~----~-~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~ 207 (311)
+++||||+++||++.+.... ....++.+......+ . ....- -...++.+++. ....++|||++-.|..+.
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~-Agl~p~dIdyIeaHgtgT 236 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQ-AGITPEQVQHLNAHATST 236 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCHHHCCEEEecCCCC
Confidence 99999999999998653211 112345443322111 1 11100 12344555544 333478999999999998
Q ss_pred HHHHH-----HHHHcCCCc-cccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC----------------------
Q 041111 208 AVLDE-----VEKHLKLNE-WVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR---------------------- 256 (311)
Q Consensus 208 ~~~~~-----~~~~lgi~~-d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~---------------------- 256 (311)
+..|. +.+.||-.. -.+ ..+...+||+.+|+-.+.+... ++++.+.
T Consensus 237 ~~~D~~E~~Ai~~~fg~~~~~~v---~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~ 313 (342)
T PRK14691 237 PVGDLGEINAIKHLFGESNALAI---TSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNA 313 (342)
T ss_pred cCCCHHHHHHHHHHhCCCCCceE---ECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCC
Confidence 87654 456676321 123 4677899998777754444332 3333221
Q ss_pred ---CCCeEEEEeechhHHHhhheeeE
Q 041111 257 ---KGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 ---~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+-+++|.-+||-|..-++++|+.
T Consensus 314 ~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 314 QPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred ccCCCCEEEEeCccCCCeeEEEEEee
Confidence 12456777888888888888764
No 109
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.40 E-value=6.4e-12 Score=122.68 Aligned_cols=245 Identities=11% Similarity=0.017 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-----CcCEEEEEecC-C-----------------CC--------CC-cHHHHHHHHcC
Q 041111 28 TESVIIGAIDELLAKTGVKPR-----DIGILVVNSSL-F-----------------NP--------MP-SLSAMVVNHYK 75 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~-----dId~ii~~s~~-~-----------------~~--------~p-~~a~~v~~~lG 75 (311)
...|+.+|+.+||+++|+++. +..+|+++++. . .. .+ ..+.+++..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998642 45678777531 1 00 11 24568999999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc---------------c-------CccCCCccch
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM---------------N-------WYAGNDRSML 133 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~---------------~-------~~~~~dr~~~ 133 (311)
+. .+.+.+. .+|+|+..||..|.++|++|..+.+||+++|.... . ..+|.|+..
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 6999999 69999999999999999999999999999986321 0 011222221
Q ss_pred hhheecccceEEEEEecCCCCCCC---CccceeeeeecccC----CCCcc--hHHHHHHHhhccchhhHHHhhhhhhccC
Q 041111 134 LTNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKG----GDDRS--FGRKIFKMKIKPYIPNFKLAFEHICIRT 204 (311)
Q Consensus 134 ~~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~----~~~~~--~g~~~~~~a~~~~~~~~~~did~v~~h~ 204 (311)
.++++||||+++||++.+..... ...++.+......+ ..... -....++.+++. .....+|||++-.|.
T Consensus 249 -~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~-Agi~~~dId~ve~hg 326 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQ-SGLHPNQVDYVNAHA 326 (437)
T ss_pred -CCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHH-cCCCHhHcCEEEccC
Confidence 37889999999999986532211 11233333221111 11111 012344555544 344478999999999
Q ss_pred CChHHHHH-----HHHHcCCCc--cccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC------------------
Q 041111 205 GGRAVLDE-----VEKHLKLNE--WVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR------------------ 256 (311)
Q Consensus 205 ~s~~~~~~-----~~~~lgi~~--d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~------------------ 256 (311)
.+....+. +.+.++-.. ..+. ...+...+||+.+|+-.+.|... ++.+.+.
T Consensus 327 tgt~~~D~~E~~ai~~~~~~~~~~~~~~-v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~ 405 (437)
T PLN02836 327 TSTPLGDAVEARAIKTVFSEHATSGGLA-FSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVP 405 (437)
T ss_pred CcCcCcCHHHHHHHHHHhcccccCCCCe-eECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCc
Confidence 98876554 344554211 0111 13456788999998877655443 3333321
Q ss_pred -------CCCeEEEEeechhHHHhhheeeE
Q 041111 257 -------KGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 -------~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+-+.+|.-+||-|.+-++++|+.
T Consensus 406 ~~~~~~~~~~~~l~nsfgfGG~na~lvl~~ 435 (437)
T PLN02836 406 LTASKAMLIRAALSNSFGFGGTNASLLFTS 435 (437)
T ss_pred ccCCCCCCccEEEEecccCCCeeEEEEEec
Confidence 11345556788877777777764
No 110
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.37 E-value=2e-11 Score=117.67 Aligned_cols=201 Identities=12% Similarity=0.010 Sum_probs=135.4
Q ss_pred cHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc--------------CccCCCc
Q 041111 65 SLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN--------------WYAGNDR 130 (311)
Q Consensus 65 ~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~--------------~~~~~dr 130 (311)
..+..++..+|+. .+.+.+. .+|+|++.||..|.++|++|.++.+||+++|..+.. +.+|.|+
T Consensus 138 ~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 4678899999996 4889999 699999999999999999999999999999964310 1123332
Q ss_pred cchhhheecccceEEEEEecCCCCCCCCccceeeeeecc----cCC-CCcch-HHHHHHHhhccchhhHHHhhhhhhccC
Q 041111 131 SMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTLRTH----KGG-DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRT 204 (311)
Q Consensus 131 ~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~~~~----~~~-~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~ 204 (311)
.. .++++||||+++||++.... ..++.+..... ... +...- ..+.++.+++. ..-..+|||++.+|.
T Consensus 215 ~~--~G~~~gEGaa~vVLe~~~~~----~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~-Agl~~~dId~v~~hg 287 (392)
T PRK09185 215 NR--DGINIGEAAAFFLLEREDDA----AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALAD-AGLAPADIGYINLHG 287 (392)
T ss_pred CC--CccceeceEEEEEEEEcCCC----cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCHHHccEEEeCC
Confidence 21 37889999999999997322 23455443221 111 11100 13444555544 344478999999999
Q ss_pred CChHHHHH-----HHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHH---HhCCCC--------------------
Q 041111 205 GGRAVLDE-----VEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFE---AKRRIR-------------------- 256 (311)
Q Consensus 205 ~s~~~~~~-----~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~---~~g~l~-------------------- 256 (311)
.+.+..|. +.+.++-. -.+ ..+...+||+.+|+-.+.|...+ ++|.+.
T Consensus 288 tgt~~~D~~E~~al~~~f~~~-~pv---~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~ 363 (392)
T PRK09185 288 TATPLNDAMESRAVAAVFGDG-VPC---SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVEN 363 (392)
T ss_pred CCCcCCCHHHHHHHHHHhCCC-Cce---eCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCC
Confidence 98876543 34556522 123 45667899999999877776543 333321
Q ss_pred ----CCCeEEEEeechhHHHhhheeeE
Q 041111 257 ----KGDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 ----~Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+-++++.-+||-|.+-++++|+.
T Consensus 364 ~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 364 AQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CccCCCCEEEEeCccCCceeEEEEEEe
Confidence 13567788888888888888875
No 111
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.37 E-value=1.2e-12 Score=97.83 Aligned_cols=74 Identities=24% Similarity=0.427 Sum_probs=57.1
Q ss_pred eeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCCCCCCCccce
Q 041111 83 YNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYEL 162 (311)
Q Consensus 83 ~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l 162 (311)
||++ ++|+|++.||++|.++|++|..+++|||++|+.+. +....++. +..+|||||+|+||++.++. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCeE
Confidence 6899 69999999999999999999999999999999985 22113343 46789999999999998543 3556
Q ss_pred eee
Q 041111 163 VHT 165 (311)
Q Consensus 163 ~~~ 165 (311)
++.
T Consensus 72 l~~ 74 (80)
T PF08545_consen 72 LDS 74 (80)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 112
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=2.3e-11 Score=118.38 Aligned_cols=95 Identities=17% Similarity=0.092 Sum_probs=79.3
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHH-HHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-NPMPSLS-AMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-~~~p~~a-~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|+.+|+++||+++|++++|||.+++++..+ ......+ ..++..+|+++ .+.+.++ .+|+|+..|+..|.+
T Consensus 34 ~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~-~~~aSg~~ai~~A~~ 111 (430)
T PRK06365 34 YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIE-GGGATGGLAFQAGYE 111 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEe-CCcHHHHHHHHHHHH
Confidence 456789999999999999999999999988775322 1112222 34679999984 8999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
.|++|.++.|||+++|+++
T Consensus 112 ~I~sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 112 EIASGRMDCVAVYGFETMS 130 (430)
T ss_pred HHHcCCCCEEEEEEeeecc
Confidence 9999999999999999764
No 113
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.36 E-value=2e-11 Score=118.47 Aligned_cols=242 Identities=14% Similarity=0.083 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCCcCEEEEEecC-C-------------C------------CCC-cHHHHHHHHcCCC
Q 041111 28 TESVIIGAIDELLAKTGVK---PRDIGILVVNSSL-F-------------N------------PMP-SLSAMVVNHYKLR 77 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~---~~dId~ii~~s~~-~-------------~------------~~p-~~a~~v~~~lGl~ 77 (311)
...++..|+++||+++|++ ++++. |+++++. . . ..+ ..+..+...+|+.
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 4568889999999999973 33443 4445421 0 0 011 2456778888886
Q ss_pred CCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeeccccc-----C-------c----------cCCCccchhh
Q 041111 78 GNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMN-----W-------Y----------AGNDRSMLLT 135 (311)
Q Consensus 78 ~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~-----~-------~----------~~~dr~~~~~ 135 (311)
.+.+.+. .+|+|++.||..|.++|++|..+.+||+++|..... | . +|.|+.. .
T Consensus 162 --G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~--~ 236 (418)
T PRK07910 162 --AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR--D 236 (418)
T ss_pred --CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--C
Confidence 5788899 699999999999999999999999999999974210 0 0 1223221 3
Q ss_pred heecccceEEEEEecCCCCCCC---CccceeeeeecccCCC---CcchH---HHHHHHhhccchhhHHHhhhhhhccCCC
Q 041111 136 NCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKGGD---DRSFG---RKIFKMKIKPYIPNFKLAFEHICIRTGG 206 (311)
Q Consensus 136 ~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~~~---~~~~g---~~~~~~a~~~~~~~~~~did~v~~h~~s 206 (311)
++++|||++++||++.+..... ...++.+.....-+.. ....+ .+.++.+++. ....++|||++-.|..+
T Consensus 237 G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~-agi~~~did~ie~hgtg 315 (418)
T PRK07910 237 GFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIEL-AGLTPGDIDHVNAHATG 315 (418)
T ss_pred CEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCHHHCCEEEcCCcC
Confidence 8999999999999986542211 1123444322211110 01112 2455555554 44457899999999999
Q ss_pred hHHHH-----HHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC----------------------
Q 041111 207 RAVLD-----EVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR---------------------- 256 (311)
Q Consensus 207 ~~~~~-----~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~---------------------- 256 (311)
.+..| .+.+.||-..-.+ ..+...+||+.+|+-.+.|... +++|.+.
T Consensus 316 t~~~D~~E~~Al~~~fg~~~~~v---~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~ 392 (418)
T PRK07910 316 TSVGDVAEGKAINNALGGHRPAV---YAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPR 392 (418)
T ss_pred CCCCCHHHHHHHHHHhCCCCCce---eCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCc
Confidence 87654 4456677322223 4677899999999987775543 3343321
Q ss_pred C--CCeEEEEeechhHHHhhheeeE
Q 041111 257 K--GDRTWQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 257 ~--Gd~vll~~~G~G~~~~a~llr~ 279 (311)
+ -.+++.-+||-|.+-++++|+.
T Consensus 393 ~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 393 PGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCccEEEEeeecCCCeeEEEEEec
Confidence 1 1345667788777777777763
No 114
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.34 E-value=4.5e-12 Score=115.77 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=84.9
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+.+..+|+.+|++++|+++|++|++||.|++++. +....+..+..+....|++.+++.+.|+ .+|+|++.|+..|..
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~ 100 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAM 100 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhh
Confidence 35678999999999999999999999999999985 4334667788899999998788999999 699999999999999
Q ss_pred HHhCCCCCeEEEEEeecccc
Q 041111 103 LLQLPPNSCALVVSTENITM 122 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s~ 122 (311)
.|++|..+.+|++|+|++|.
T Consensus 101 ~I~sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 101 AIASGEADVVLAGGVESMSR 120 (264)
T ss_dssp HHHTTS-SEEEEEEEEETTT
T ss_pred hhcCCCccEEEEeccccccc
Confidence 99999999999999999983
No 115
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=1.2e-11 Score=120.37 Aligned_cols=96 Identities=14% Similarity=0.229 Sum_probs=84.8
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|+++||+++|++++|||.||+++. +....+..+..++..+|++.+++.++++ .+|+|++.++..|.++
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~ 102 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAAN 102 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHH
Confidence 3678999999999999999999999999998864 3223456678899999996468999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc
Q 041111 104 LQLPPNSCALVVSTENIT 121 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s 121 (311)
|++|..+++||+++|++|
T Consensus 103 I~sG~~d~vLv~G~E~ms 120 (426)
T PRK08170 103 IALGRADLVLAGGVEAMS 120 (426)
T ss_pred HHCCCCCEEEEEEEeccc
Confidence 999999999999999766
No 116
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.27 E-value=3.9e-10 Score=111.66 Aligned_cols=241 Identities=16% Similarity=0.074 Sum_probs=155.3
Q ss_pred cHHHHHHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVK--PRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~--~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
+..+|+.+|+++||+++|++ ++|||.+++++............+++++|+.+ .+..... .||.++..++..|...|
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~I 103 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRI 103 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHH
Confidence 78999999999999999999 99999999775422122334578999999975 4555556 58889999999999999
Q ss_pred hCCCCCeEEEEEeecccc---------------------------------cCc--------------------------
Q 041111 105 QLPPNSCALVVSTENITM---------------------------------NWY-------------------------- 125 (311)
Q Consensus 105 ~ag~~~~vLvv~~e~~s~---------------------------------~~~-------------------------- 125 (311)
++|.+++|||+++|+++. .|.
T Consensus 104 asG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t 183 (498)
T PRK08257 104 AAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRS 183 (498)
T ss_pred HCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcC
Confidence 999999999999997530 000
Q ss_pred ---------------------cC------------------CCcc-----chhhhe-ecccceEEEEEecCCCCCCC---
Q 041111 126 ---------------------AG------------------NDRS-----MLLTNC-LFRLGGAAILLSNRSSDRRR--- 157 (311)
Q Consensus 126 ---------------------~~------------------~dr~-----~~~~~~-l~GDGAaA~vLs~~~~~~~~--- 157 (311)
.| .+|. +.+-+. ..+|||+|+||.+.+.....
T Consensus 184 ~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~ 263 (498)
T PRK08257 184 PEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVP 263 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCC
Confidence 00 0010 011133 37899999999986432111
Q ss_pred -Cc-cceeeeeecccC--C-CCcch-----HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc---cc
Q 041111 158 -SK-YELVHTLRTHKG--G-DDRSF-----GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW---VM 224 (311)
Q Consensus 158 -~~-~~l~~~~~~~~~--~-~~~~~-----g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d---~~ 224 (311)
.. ..+.+....+.. . +...+ .+...+.+++. .+...+|||.+=+|-.-.-......+.||+.++ .+
T Consensus 264 ~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~-AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pv 342 (498)
T PRK08257 264 EDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALAL-AGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPL 342 (498)
T ss_pred CCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHH-hCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCc
Confidence 11 122222211111 0 01111 22333444433 333478999999998876777777899999876 33
Q ss_pred chhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHH
Q 041111 225 EPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFK 271 (311)
Q Consensus 225 ~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~ 271 (311)
+. .-=+.-+||.+.++.+..+.++.++=+=+++.+.|+.+.|.-.+
T Consensus 343 N~-sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~GG~~~ 388 (498)
T PRK08257 343 TV-TGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTANGGYLT 388 (498)
T ss_pred CC-CcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECCCChhh
Confidence 32 11223579999998888888776642223677777777774333
No 117
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=4.4e-10 Score=108.04 Aligned_cols=222 Identities=14% Similarity=0.017 Sum_probs=142.1
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+.+..+|+.+|+++||+++||+++|||.++..+... +.....+++.+|+. ..+...+. .+|+++..++..|...
T Consensus 21 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~ 95 (388)
T PRK08142 21 PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQA 95 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHH
Confidence 3567899999999999999999999999987532211 11124588999997 46888888 6999999999999999
Q ss_pred HhCCCCCeEEEEEeecccc------------------cCc----------------------------------------
Q 041111 104 LQLPPNSCALVVSTENITM------------------NWY---------------------------------------- 125 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s~------------------~~~---------------------------------------- 125 (311)
|++|.+++|||++.|+++. .|.
T Consensus 96 I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A 175 (388)
T PRK08142 96 IAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHA 175 (388)
T ss_pred HHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHh
Confidence 9999999999999886430 010
Q ss_pred --cC-------C------------CccchhhheecccceEEEEEecCCCCCC--CCccceeeeeeccc----CCCCcch-
Q 041111 126 --AG-------N------------DRSMLLTNCLFRLGGAAILLSNRSSDRR--RSKYELVHTLRTHK----GGDDRSF- 177 (311)
Q Consensus 126 --~~-------~------------dr~~~~~~~l~GDGAaA~vLs~~~~~~~--~~~~~l~~~~~~~~----~~~~~~~- 177 (311)
.| . ++-+++-+...+|||+|+||.+.+..+. .....+.+...... ...+..+
T Consensus 176 ~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~~~~~~~~~~~ 255 (388)
T PRK08142 176 QHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQMGGKVDLTYS 255 (388)
T ss_pred ccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCccccCcccccH
Confidence 00 0 0101222566799999999998653211 11233444322110 1111111
Q ss_pred -HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCcc----------c-------c--chhHhhHhhcCCc
Q 041111 178 -GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEW----------V-------M--EPSRMTLYRFGNT 237 (311)
Q Consensus 178 -g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d----------~-------~--~~s~~~~~~~Gn~ 237 (311)
.+...+.+.+. .+..++|||.+-+|-.-.-..-...+.||+.+. + + +.+-- +--.||.
T Consensus 256 ~~~~aa~~a~~~-AGi~~~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG-~l~~G~p 333 (388)
T PRK08142 256 GAAWSGPAAFAE-AGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGG-GLCNNHP 333 (388)
T ss_pred HHHHHHHHHHHH-cCCCHHHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCCh-hhcCCCc
Confidence 22233334333 333478999999998766666666788988543 1 1 00000 0125899
Q ss_pred chhhHHHHHHHHHHh
Q 041111 238 SSSCLWYKLAYFEAK 252 (311)
Q Consensus 238 ~sas~~~~L~~~~~~ 252 (311)
..|+-+..+.++.++
T Consensus 334 ~gatG~~~~~E~~~Q 348 (388)
T PRK08142 334 ANRGGMTKVIEAVRQ 348 (388)
T ss_pred CcccHHHHHHHHHHH
Confidence 988888888877653
No 118
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=9.3e-10 Score=105.57 Aligned_cols=221 Identities=12% Similarity=0.016 Sum_probs=139.1
Q ss_pred hhcHHHHHHHHHHHHHHHcC-CCC-CCcCEEEEEecCCC-CCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTG-VKP-RDIGILVVNSSLFN-PMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~ag-l~~-~dId~ii~~s~~~~-~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~ 101 (311)
+.+..+|+.+|+++||+++| |++ +|||.+++++.... ........+.+.+|+. ..+.+.+ |+++..++..|.
T Consensus 22 ~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~ 96 (385)
T PRK06066 22 EVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAV 96 (385)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHH
Confidence 57789999999999999999 997 79999987542111 0111124567889985 2355444 789999999999
Q ss_pred HHHhCCCCCeEEEEEeecccc--------------cCc------------------------------------------
Q 041111 102 QLLQLPPNSCALVVSTENITM--------------NWY------------------------------------------ 125 (311)
Q Consensus 102 ~~i~ag~~~~vLvv~~e~~s~--------------~~~------------------------------------------ 125 (311)
..|++|.+++|||++.|+++. .|.
T Consensus 97 ~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~ 176 (385)
T PRK06066 97 MHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGL 176 (385)
T ss_pred HHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999986531 010
Q ss_pred -cC-------C------------CccchhhheecccceEEEEEecCCCCCCC--Cccceeeeee-cc-cCCCCcch----
Q 041111 126 -AG-------N------------DRSMLLTNCLFRLGGAAILLSNRSSDRRR--SKYELVHTLR-TH-KGGDDRSF---- 177 (311)
Q Consensus 126 -~~-------~------------dr~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~~l~~~~~-~~-~~~~~~~~---- 177 (311)
.| - ++-+...+...+|||+|+||.+.+..... ....+.+... +. .+.....+
T Consensus 177 ~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g~~~~~~~~~~~~~~~~~ 256 (385)
T PRK06066 177 SNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIGWSTESSNLETAELGKAN 256 (385)
T ss_pred cCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCCcccccccccccH
Confidence 00 0 11122336778999999999986532111 1123443321 11 11111111
Q ss_pred -HHHHHHHhhccchhhH--HHhhhhhhccCCChHHHHHHHHHcCCCc--cc----------------cchhHhhHhhcCC
Q 041111 178 -GRKIFKMKIKPYIPNF--KLAFEHICIRTGGRAVLDEVEKHLKLNE--WV----------------MEPSRMTLYRFGN 236 (311)
Q Consensus 178 -g~~~~~~a~~~~~~~~--~~did~v~~h~~s~~~~~~~~~~lgi~~--d~----------------~~~s~~~~~~~Gn 236 (311)
.+...+.+.+. .... .+|||.+-+|-.-.-..-...+.||+.+ +. ++.+--.+ -+||
T Consensus 257 ~~~~Aa~~a~~~-AGi~~p~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~l-a~Gh 334 (385)
T PRK06066 257 YMRIAADMAYKM-AGIESPRKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHL-AKGV 334 (385)
T ss_pred HHHHHHHHHHHH-cCCCCCHHHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchh-cCCC
Confidence 12233444433 3333 6899999999887666666788999876 22 22111111 2699
Q ss_pred cchhhHHHHHHHHHHh
Q 041111 237 TSSSCLWYKLAYFEAK 252 (311)
Q Consensus 237 ~~sas~~~~L~~~~~~ 252 (311)
...++-+..+.++.++
T Consensus 335 p~gatG~~~v~e~~~Q 350 (385)
T PRK06066 335 PLEASGLSLLLDAVEY 350 (385)
T ss_pred ccchhHHHHHHHHHHH
Confidence 9988888888887663
No 119
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.19 E-value=4.2e-10 Score=108.32 Aligned_cols=216 Identities=15% Similarity=0.105 Sum_probs=144.3
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCC-CCCcC---EEEEEec----C----C----------C-C--------CC-cHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVK-PRDIG---ILVVNSS----L----F----------N-P--------MP-SLSAMVV 71 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~-~~dId---~ii~~s~----~----~----------~-~--------~p-~~a~~v~ 71 (311)
.-.....++..|+++||+++|++ ..+.+ .+++++. . . . . .+ ..+..++
T Consensus 67 ~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs 146 (412)
T COG0304 67 FMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVA 146 (412)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHH
Confidence 45567789999999999999997 33443 2334431 1 0 0 0 11 2467789
Q ss_pred HHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeec-ccc--------------c------CccCCCc
Q 041111 72 NHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTEN-ITM--------------N------WYAGNDR 130 (311)
Q Consensus 72 ~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~-~s~--------------~------~~~~~dr 130 (311)
..+|+. .+.+.+. .+|+++.+|+..|.++|+.|..+.+|++++|. .+. . ..+|.|+
T Consensus 147 ~~~g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 147 IVFGLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred HHhCCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 999997 5889999 79999999999999999999999999999977 221 1 1123333
Q ss_pred cchhhheecccceEEEEEecCCCCCCC-C--ccceeeeee----cccC--C-CCcchHHHHHHHhhccchhhHHHhhhhh
Q 041111 131 SMLLTNCLFRLGGAAILLSNRSSDRRR-S--KYELVHTLR----THKG--G-DDRSFGRKIFKMKIKPYIPNFKLAFEHI 200 (311)
Q Consensus 131 ~~~~~~~l~GDGAaA~vLs~~~~~~~~-~--~~~l~~~~~----~~~~--~-~~~~~g~~~~~~a~~~~~~~~~~did~v 200 (311)
++ .++++|+||+.+||+..+....+ . -.++.+... .|+. . +... ..+.++.+++. ....++||||+
T Consensus 224 ~R--dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~G-a~~am~~AL~~-Agl~~~~idYi 299 (412)
T COG0304 224 NR--DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEG-AIRAMRAALAD-AGLTPEDIDYI 299 (412)
T ss_pred CC--CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCch-HHHHHHHHHHH-cCCCHhHCCEE
Confidence 22 38999999999999997753321 1 124444321 1221 1 1111 24567777776 66678899999
Q ss_pred hccCCChHHHHHH-----HHHcCCCccccchhHhhHhhcCCcchhhHHHHHH
Q 041111 201 CIRTGGRAVLDEV-----EKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLA 247 (311)
Q Consensus 201 ~~h~~s~~~~~~~-----~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~ 247 (311)
..|..+.+..|.. .+.|+-...++. ...+...+||+-.|.-.+-+.
T Consensus 300 naHgTsT~~nD~~E~~ai~~vfg~~~~~~~-vsstKs~tGH~lGAaGaveai 350 (412)
T COG0304 300 NAHGTSTPANDKAESLAIKRVFGEHAKSLP-VSSTKSLTGHTLGAAGAVEAI 350 (412)
T ss_pred eCCCccCCCccHHHHHHHHHHhcccccCce-eeecccccccChhhHHHHHHH
Confidence 9999999887654 455663222211 146778889988777654443
No 120
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.13 E-value=5.6e-10 Score=101.49 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=85.7
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
..-++.+|+..|++.+|++++++++|++-||+++. +-...-..+++.+--.||+.++++..++ .-|+|++.|+.+|.+
T Consensus 26 ssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 26 SSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQ 104 (396)
T ss_pred ccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHH
Confidence 34677899999999999999999999999999964 3233335568888888999889999999 799999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
-|+.|..+.++..+.|.||
T Consensus 105 sI~~G~~divVaGGmEsMS 123 (396)
T KOG1390|consen 105 SIQTGHADIVVAGGMESMS 123 (396)
T ss_pred HHhcCCccEEEecccchhc
Confidence 9999999999999999999
No 121
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=99.11 E-value=4.9e-09 Score=95.34 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=127.3
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
++-...|..+|++.+|+++|++++|||.++-+---.+... +...++.|++ |.+.+. .+|+++..+|.+|..++
T Consensus 48 EkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Gly-gACST~~e~l~laa~~v 120 (329)
T PF07451_consen 48 EKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLY-GACSTMMESLALAAMLV 120 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchh-hHHHHHHHHHHHHHHHH
Confidence 4445679999999999999999999999998864444433 4788888886 678999 49999999999999999
Q ss_pred hCCCCCeEEEEEeeccc---ccCccCC----CccchhhheecccceEEEEEecCCCCCCCCccceeeee--e-cccCCC-
Q 041111 105 QLPPNSCALVVSTENIT---MNWYAGN----DRSMLLTNCLFRLGGAAILLSNRSSDRRRSKYELVHTL--R-THKGGD- 173 (311)
Q Consensus 105 ~ag~~~~vLvv~~e~~s---~~~~~~~----dr~~~~~~~l~GDGAaA~vLs~~~~~~~~~~~~l~~~~--~-~~~~~~- 173 (311)
.+|-++++|+.++...+ ..|+.|. .|. ++...---||+|+||++.+.. .++.+.. + .++|..
T Consensus 121 dgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp--~tAqwTVTGaGa~il~~~~~~-----p~It~~T~GkVvD~G~~D 193 (329)
T PF07451_consen 121 DGGFADYVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAAILSKEGSG-----PRITHATIGKVVDMGIKD 193 (329)
T ss_dssp HTTS-SEEEEEEEE-CCHHHHHT---GGGT------TT--EE--EEEEEEEESS--S-----EEEEEEE----B-SS---
T ss_pred hCCCcceEEEEeccccchhhhhccCchhccCCCC--CcccEEEeceEEEEEecCCCC-----cEEEEEEEEEEEEcCCCC
Confidence 99999999999988776 3454332 221 233444578999999987654 3344321 1 234432
Q ss_pred CcchHHHHHHHhhccchh------hHHHhhhhhhccCC---ChHHHHHHHHHcCCCccc-cchhHhhH-----hhc--CC
Q 041111 174 DRSFGRKIFKMKIKPYIP------NFKLAFEHICIRTG---GRAVLDEVEKHLKLNEWV-MEPSRMTL-----YRF--GN 236 (311)
Q Consensus 174 ~~~~g~~~~~~a~~~~~~------~~~~did~v~~h~~---s~~~~~~~~~~lgi~~d~-~~~s~~~~-----~~~--Gn 236 (311)
....|...-..+.+.+.. ..++|.|.++.--. +.+++..+.++-|++.++ ..+|--.+ .++ |-
T Consensus 194 ~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGG 273 (329)
T PF07451_consen 194 PNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGG 273 (329)
T ss_dssp TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-E
T ss_pred cccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCC
Confidence 233344443333333222 22578898888765 467777887777877654 21111111 011 22
Q ss_pred cch-hhHHHHHHHH---HHhCCCCCCCeEEEEeechhHH
Q 041111 237 TSS-SCLWYKLAYF---EAKRRIRKGDRTWQIAFGSGFK 271 (311)
Q Consensus 237 ~~s-as~~~~L~~~---~~~g~l~~Gd~vll~~~G~G~~ 271 (311)
-|+ +|......+. +++|++ .+||+++.|+=++
T Consensus 274 SGcgCSA~V~~g~ll~~l~~g~~---krvL~vaTGALlS 309 (329)
T PF07451_consen 274 SGCGCSAVVLCGYLLPKLRKGEL---KRVLFVATGALLS 309 (329)
T ss_dssp ESHHHHHHHHHHCHHHHHHTTS----SEEEEEEEEE---
T ss_pred CCcchHHHHHHHHHHHHHHcCCc---eEEEEEEchhhcC
Confidence 222 2222222233 445665 7899999987443
No 122
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.09 E-value=6e-10 Score=108.66 Aligned_cols=97 Identities=23% Similarity=0.217 Sum_probs=80.4
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCC--cCEEEEEecC-CC--CCCcHHHHHHHHcCCC------CCcceeeecCCccch
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRD--IGILVVNSSL-FN--PMPSLSAMVVNHYKLR------GNILSYNFGGVGCSA 92 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~d--Id~ii~~s~~-~~--~~p~~a~~v~~~lGl~------~~~~~~~i~~~~Cas 92 (311)
.+.+..+|+.+|++++|+++|++++| ||.+++++.. .. ..+..+..+...+|++ ..++.+.++ .+|+|
T Consensus 44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caS 122 (438)
T PTZ00455 44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACAS 122 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHH
Confidence 35678999999999999999999999 9999988642 11 2345566667555443 268999999 69999
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEeeccc
Q 041111 93 GLISIDLAKQLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 93 ~~~Al~~A~~~i~ag~~~~vLvv~~e~~s 121 (311)
++.|+..|.++|++|.++.+||+++|+++
T Consensus 123 G~~Ai~~A~~~I~sG~~dvvlv~G~E~ms 151 (438)
T PTZ00455 123 GGLAVQSAWEALLAGTSDIALVVGVEVQT 151 (438)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEeecc
Confidence 99999999999999999999999999764
No 123
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.07 E-value=2.1e-09 Score=122.33 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=138.3
Q ss_pred HHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc--c---C-----------ccCCC
Q 041111 66 LSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM--N---W-----------YAGND 129 (311)
Q Consensus 66 ~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~--~---~-----------~~~~d 129 (311)
.+.+|+..||+. .+.+.|+ .+|+|++.||..|++.|++|.++.+|++|++.... . | -++.|
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478899999997 5999999 79999999999999999999999999999876321 0 1 02333
Q ss_pred ccchhhheecccceEEEEEecCCCCCCCC--cc-ceeeeeecccCCCCcch-----H-HHHHHHhhccchhhHHHhhhhh
Q 041111 130 RSMLLTNCLFRLGGAAILLSNRSSDRRRS--KY-ELVHTLRTHKGGDDRSF-----G-RKIFKMKIKPYIPNFKLAFEHI 200 (311)
Q Consensus 130 r~~~~~~~l~GDGAaA~vLs~~~~~~~~~--~~-~l~~~~~~~~~~~~~~~-----g-~~~~~~a~~~~~~~~~~did~v 200 (311)
.+. .+++.|+|++++||.+-+...+.. -| .|.+...++-|....-+ + .++++.+++. .+...+||++|
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~-Agi~p~~I~yI 338 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDD-AGFAPHTCGLI 338 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHH-cCCCHHHCCEE
Confidence 321 388999999999999865432111 12 23333222222110000 2 3445555554 44457899999
Q ss_pred hccCCChHHHHH-----HHHHcCCCc---cccchhHhhHhhcCCcchhhHHHHHHHH---HHhCCCC-------------
Q 041111 201 CIRTGGRAVLDE-----VEKHLKLNE---WVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKRRIR------------- 256 (311)
Q Consensus 201 ~~h~~s~~~~~~-----~~~~lgi~~---d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~------------- 256 (311)
-.|..+....|. +.+.|+-.. ..+. -.++...+||+.+|+-...|-.. ++.+.+.
T Consensus 339 eaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~-vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~ 417 (2582)
T TIGR02813 339 EAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIA-LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLD 417 (2582)
T ss_pred EecCCCCCCCCHHHHHHHHHHhcccccCCCCce-eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999877554 456666422 1111 14666899999999988887654 3333221
Q ss_pred -------------------CC--CeEEEEeechhHHHhhheeeEe
Q 041111 257 -------------------KG--DRTWQIAFGSGFKCNSAVWRAL 280 (311)
Q Consensus 257 -------------------~G--d~vll~~~G~G~~~~a~llr~~ 280 (311)
.+ .++++-+||-|.+-+.++|+--
T Consensus 418 ~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 418 IENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred ccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 11 4567788999988888988854
No 124
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.9e-09 Score=104.97 Aligned_cols=96 Identities=17% Similarity=0.264 Sum_probs=82.1
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSL-FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~-~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
+.+..+|+.+|++++|+++|+++++||.+++++.. ....+..+..+....|++...+.+.++ .+|+|++.++..|.++
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~ 106 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANK 106 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHH
Confidence 46789999999999999999999999999999742 111244567766666776568999999 6999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc
Q 041111 104 LQLPPNSCALVVSTENIT 121 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s 121 (311)
|++|..+.+|++++|++|
T Consensus 107 I~sG~~d~vlvgG~E~ms 124 (427)
T PRK09268 107 IALGQIDSGIAGGVDTTS 124 (427)
T ss_pred HHCCCCCEEEEeeEEccC
Confidence 999999999999999987
No 125
>PRK07937 lipid-transfer protein; Provisional
Probab=98.98 E-value=2.2e-08 Score=95.06 Aligned_cols=229 Identities=14% Similarity=-0.011 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC--CcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhC
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPM--PSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQL 106 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~--p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~a 106 (311)
.+|+.+|+++||+++||+++|||.++.+++ +... ......+...+|+.+..+...+. +++..++..|...|++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 799999999999999999999998864432 2111 11123455678875334444444 3577799999999999
Q ss_pred CCCCeEEEEEeecccc-----------------cCc--------------------------------------cC----
Q 041111 107 PPNSCALVVSTENITM-----------------NWY--------------------------------------AG---- 127 (311)
Q Consensus 107 g~~~~vLvv~~e~~s~-----------------~~~--------------------------------------~~---- 127 (311)
|.+++|||++.|+++. ++. .|
T Consensus 100 G~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~ 179 (352)
T PRK07937 100 GEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEP 179 (352)
T ss_pred CCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhc
Confidence 9999999999986531 110 01
Q ss_pred -C------------CccchhhheecccceEEEEEecCCCCCCC--Cccceeeeeec----ccCCCCc-ch--HHHHHHHh
Q 041111 128 -N------------DRSMLLTNCLFRLGGAAILLSNRSSDRRR--SKYELVHTLRT----HKGGDDR-SF--GRKIFKMK 185 (311)
Q Consensus 128 -~------------dr~~~~~~~l~GDGAaA~vLs~~~~~~~~--~~~~l~~~~~~----~~~~~~~-~~--g~~~~~~a 185 (311)
. ++=+++.+...+|||+|+||.+.+..... ....+.+.... .++..+. .. .++..+.+
T Consensus 180 rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~~~~~~~d~~~~~~~~~a~~~a 259 (352)
T PRK07937 180 SISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIESPSLGARDLTRSPSTALAAEAA 259 (352)
T ss_pred cCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCCccccccccccHHHHHHHHHHh
Confidence 0 00012235667999999999986432110 11334443221 1111111 11 22233332
Q ss_pred hccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCc-cccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEE
Q 041111 186 IKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNE-WVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQI 264 (311)
Q Consensus 186 ~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~-d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~ 264 (311)
....++|||.+=+|-.-.-..-...+.||+.. .+++.+--.+. ||-..++-+..+.++.++=+=+..++.|..
T Consensus 260 ----Agi~~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~~a~~~l~~ 333 (352)
T PRK07937 260 ----TGGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDGSARRALAH 333 (352)
T ss_pred ----cCCCHHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhccCCCEEEEe
Confidence 13346899999999987777777789999844 47765556665 888888888888888764221245667776
Q ss_pred eech
Q 041111 265 AFGS 268 (311)
Q Consensus 265 ~~G~ 268 (311)
+.|.
T Consensus 334 ~~Gg 337 (352)
T PRK07937 334 ATSG 337 (352)
T ss_pred cccc
Confidence 6664
No 126
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.95 E-value=4.6e-09 Score=94.74 Aligned_cols=121 Identities=21% Similarity=0.322 Sum_probs=86.2
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcC-----EEEEEecCC------------C----C--------CC-cHHHHHHHHcC
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIG-----ILVVNSSLF------------N----P--------MP-SLSAMVVNHYK 75 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId-----~ii~~s~~~------------~----~--------~p-~~a~~v~~~lG 75 (311)
.....|+..|+++||+++|+++++++ +|+++++.. . . .+ ..+.+++..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 44567999999999999999885432 355565311 0 0 12 35788999999
Q ss_pred CCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEee-cccc----cC------c-----cCCCccchhhheec
Q 041111 76 LRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTE-NITM----NW------Y-----AGNDRSMLLTNCLF 139 (311)
Q Consensus 76 l~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e-~~s~----~~------~-----~~~dr~~~~~~~l~ 139 (311)
+. .+.+.+. .+|+|++.||..|.++|++|..+.+||+++| ..+. .| . ++.++.. .++++
T Consensus 165 l~--G~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~ 239 (254)
T PF00109_consen 165 LR--GPSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVL 239 (254)
T ss_dssp B---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-B
T ss_pred CC--Ccccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEE
Confidence 97 5889999 6999999999999999999999999999999 4441 01 0 1222222 48999
Q ss_pred ccceEEEEEecC
Q 041111 140 RLGGAAILLSNR 151 (311)
Q Consensus 140 GDGAaA~vLs~~ 151 (311)
|+||+++||++.
T Consensus 240 gEGa~~~vLe~~ 251 (254)
T PF00109_consen 240 GEGAGALVLERL 251 (254)
T ss_dssp B-EEEEEEEEEH
T ss_pred ECceEEEEEEEh
Confidence 999999999874
No 127
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.81 E-value=1.8e-08 Score=91.51 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=82.9
Q ss_pred HHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec--CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHH
Q 041111 23 EARKETESVIIGAIDELLAKTGVKPRDIGILVVNSS--LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLA 100 (311)
Q Consensus 23 ~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~--~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A 100 (311)
.-+..+-+|...+.+..+++.+++|+.|.-|++++. +. .....+.+-+-+.|++..++...++ ..|+|+++|+...
T Consensus 56 fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg-~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadi 133 (435)
T KOG1389|consen 56 FKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPG-SGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADI 133 (435)
T ss_pred cccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCC-cchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHH
Confidence 346678899999999999999999999999999975 32 2223344455567898778888888 7999999999999
Q ss_pred HHHHhCCCCCeEEEEEeeccccc
Q 041111 101 KQLLQLPPNSCALVVSTENITMN 123 (311)
Q Consensus 101 ~~~i~ag~~~~vLvv~~e~~s~~ 123 (311)
..-|++|.++..|-.+.|.|+.+
T Consensus 134 A~~Ir~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 134 AAKIRAGFYDIGLAAGVESMTTN 156 (435)
T ss_pred HHHHhcCceeeecccchhhhccc
Confidence 99999999999999999999854
No 128
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.73 E-value=1.9e-08 Score=93.03 Aligned_cols=205 Identities=13% Similarity=0.116 Sum_probs=136.6
Q ss_pred cHHHHHHHHHHHHHHHcCCCCC---CcC----EEEEEec-C---------------------CCCCC----c-HHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPR---DIG----ILVVNSS-L---------------------FNPMP----S-LSAMVVN 72 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~---dId----~ii~~s~-~---------------------~~~~p----~-~a~~v~~ 72 (311)
+...|+..|+++||+++|+.+. +.| +|.+++. . .+..| + .+.+|+.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4567999999999999998765 222 3444431 0 02233 1 2578999
Q ss_pred HcCCCCCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccccC---------------------ccCCCcc
Q 041111 73 HYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITMNW---------------------YAGNDRS 131 (311)
Q Consensus 73 ~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~~~---------------------~~~~dr~ 131 (311)
++|+. .+...++ .+|+++..++-.|.++|+.|.+|..|..++|.+-.+. .+|.|++
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99996 5899999 7999999999999999999999999999999875211 1233432
Q ss_pred chhhheecccceEEEEEecCCCCCCC-C--ccceeeee----ecccCC---CCcchHHHHHHHhhccchhhHHHhhhhhh
Q 041111 132 MLLTNCLFRLGGAAILLSNRSSDRRR-S--KYELVHTL----RTHKGG---DDRSFGRKIFKMKIKPYIPNFKLAFEHIC 201 (311)
Q Consensus 132 ~~~~~~l~GDGAaA~vLs~~~~~~~~-~--~~~l~~~~----~~~~~~---~~~~~g~~~~~~a~~~~~~~~~~did~v~ 201 (311)
+ .++++|+|++.+||+.-+....+ + -.|+++.. ..|+.. ++.. -...++.+++. ....++||||+-
T Consensus 250 R--dGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~G-a~~am~raL~~-Agl~pe~i~YvN 325 (440)
T KOG1394|consen 250 R--DGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAG-AVLAMERALKD-AGLSPEDIDYVN 325 (440)
T ss_pred C--CceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcch-HHHHHHHHHHH-cCCChhhcCeee
Confidence 2 38999999999999986643211 1 12333321 123321 1121 12345666665 666689999999
Q ss_pred ccCCChHHHHHH-----HHHcCCCcc--ccchhHhhHhhcCCcchhh
Q 041111 202 IRTGGRAVLDEV-----EKHLKLNEW--VMEPSRMTLYRFGNTSSSC 241 (311)
Q Consensus 202 ~h~~s~~~~~~~-----~~~lgi~~d--~~~~s~~~~~~~Gn~~sas 241 (311)
.|..|...-|.. .+.|+-... ++ -++..-.||+-.|.
T Consensus 326 AHATST~~GD~aE~~Ai~~vf~~~~~~~~v---sStKgaiGHLLGAA 369 (440)
T KOG1394|consen 326 AHATSTPLGDAAEAEAIKRVFGEHNIASKV---SSTKGAIGHLLGAA 369 (440)
T ss_pred cccccCcCchHHHHHHHHHHhccCCccccc---ccccchhhhhcccc
Confidence 999998876544 455553333 34 46677788876554
No 129
>PRK07855 lipid-transfer protein; Provisional
Probab=98.64 E-value=1.3e-07 Score=90.97 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=74.5
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+.+..+|+.+|+++||+++||+++|||.+++.+.. ..+. ..+++.+|+.+..+...+. .+|+++..++..|...
T Consensus 20 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~ 94 (386)
T PRK07855 20 SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMA 94 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHH
Confidence 456789999999999999999999999999864321 1222 5688999997424566888 6999999999999999
Q ss_pred HhCCCCCeEEEEEe
Q 041111 104 LQLPPNSCALVVST 117 (311)
Q Consensus 104 i~ag~~~~vLvv~~ 117 (311)
|++|.+++|||+++
T Consensus 95 I~sG~~d~vLv~g~ 108 (386)
T PRK07855 95 VATGVADVVVCYRA 108 (386)
T ss_pred HHCCCCCEEEEEee
Confidence 99999999999987
No 130
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.61 E-value=1.2e-06 Score=93.95 Aligned_cols=221 Identities=14% Similarity=0.111 Sum_probs=145.9
Q ss_pred HHHhhcHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEec-CCCCCC-------------------cHHHHHHHHcCCC
Q 041111 22 AEARKETESVIIGAIDELLAKTGVKPRDIG----ILVVNSS-LFNPMP-------------------SLSAMVVNHYKLR 77 (311)
Q Consensus 22 ~~~~e~~~~la~~A~~~aL~~agl~~~dId----~ii~~s~-~~~~~p-------------------~~a~~v~~~lGl~ 77 (311)
+..-...-.|..+.+.+||+++|+.++.+. +|+.+.+ .+|... ..+.+++..|++.
T Consensus 85 A~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~ 164 (1061)
T COG3321 85 AEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS 164 (1061)
T ss_pred HHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC
Confidence 333344455899999999999999999888 4555543 222211 2578999999997
Q ss_pred CCcceeeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc-----cCc-----------cCCCccchhhheeccc
Q 041111 78 GNILSYNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM-----NWY-----------AGNDRSMLLTNCLFRL 141 (311)
Q Consensus 78 ~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~-----~~~-----------~~~dr~~~~~~~l~GD 141 (311)
.+.+.|. .+|+|++.|+.+|++.|++|+++.+|+.++..... .|. +..|..- .+++.|+
T Consensus 165 --GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a--dG~v~ge 239 (1061)
T COG3321 165 --GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA--DGYVRGE 239 (1061)
T ss_pred --CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC--CCEEEee
Confidence 6999999 79999999999999999999999999999876631 111 0112211 3889999
Q ss_pred ceEEEEEecCCCCCCC--Ccccee-eeeecccCCCCcch-------HHHHHHHhhccchhhHHHhhhhhhccCCChHHHH
Q 041111 142 GGAAILLSNRSSDRRR--SKYELV-HTLRTHKGGDDRSF-------GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLD 211 (311)
Q Consensus 142 GAaA~vLs~~~~~~~~--~~~~l~-~~~~~~~~~~~~~~-------g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~ 211 (311)
|+++++|.+-.....- ..|.++ +...++.|... .+ ...+++.+++. ..-.+.+|+++=.|..+..+-|
T Consensus 240 G~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~-gltaP~~~aQ~~v~~~al~~-a~i~p~tv~yvEaHgTGT~lGD 317 (1061)
T COG3321 240 GAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSN-GLTAPNLEAQADVIREALAD-AGIDPATVQYVEAHGTGTPLGD 317 (1061)
T ss_pred eEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcC-CCCCCCHHHHHHHHHHHHHh-cCCCcccCcEEEecCCCCCCcC
Confidence 9999999986542211 112222 11112223111 11 34556666654 4444678999999999887765
Q ss_pred HH-----HHHcCCC-ccccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 212 EV-----EKHLKLN-EWVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 212 ~~-----~~~lgi~-~d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
-+ .+.++-. .+....--+...+.||+.+|.-...|-..
T Consensus 318 piE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~ 361 (1061)
T COG3321 318 PIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKT 361 (1061)
T ss_pred HHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHH
Confidence 44 3444422 13222225667899999998877666544
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.49 E-value=3.3e-07 Score=88.35 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=74.4
Q ss_pred cHHHHHHHHHHHHHHHc-------CCCCCCcCEEEEEecC--CCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHH
Q 041111 27 ETESVIIGAIDELLAKT-------GVKPRDIGILVVNSSL--FNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISI 97 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~a-------gl~~~dId~ii~~s~~--~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al 97 (311)
+..++..+++.+++.++ ++++.+||.+++++.. .......+..++..+|++.+.+.+.++ .+|+|++.|+
T Consensus 21 s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av 99 (392)
T COG0183 21 SLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAV 99 (392)
T ss_pred chhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHH
Confidence 34444444444444444 4566668888888642 234667889999999999669999999 7999999999
Q ss_pred HHHHHHHhCCCCCeEEEEEeeccc
Q 041111 98 DLAKQLLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~s 121 (311)
..|+..|++|..+.+|+++.|++|
T Consensus 100 ~~A~~~I~sG~~dvvlagG~E~mS 123 (392)
T COG0183 100 RLAAQAIASGEADVVLAGGVEKMS 123 (392)
T ss_pred HHHHHHHHCCCCCEEEEEeeeecc
Confidence 999999999999999999999998
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=98.24 E-value=1.2e-06 Score=78.28 Aligned_cols=94 Identities=21% Similarity=0.308 Sum_probs=77.8
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+.+..||+.+|+.+||+++++.-++|+.-+++-.. .......+...++|+. .+|.+.++ .+|+++..||.+|+++
T Consensus 25 ~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvf--gdstcgqraiyevgmt-gipi~nvn-nncatgssalflakqi 100 (408)
T KOG1406|consen 25 ADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVF--GDSTCGQRAIYEVGMT-GIPIYNVN-NNCATGSSALFLAKQI 100 (408)
T ss_pred cCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeee--cCCccchHHHHhcccc-Ccceeecc-CccccCchHHHHHHHH
Confidence 456788999999999999999999988865444210 1112335666689998 69999999 5999999999999999
Q ss_pred HhCCCCCeEEEEEeeccc
Q 041111 104 LQLPPNSCALVVSTENIT 121 (311)
Q Consensus 104 i~ag~~~~vLvv~~e~~s 121 (311)
|++|..++||..+.|+|+
T Consensus 101 iesgn~dcvlalgfekm~ 118 (408)
T KOG1406|consen 101 IESGNSDCVLALGFEKME 118 (408)
T ss_pred HhcCCcceEEeechhhhC
Confidence 999999999999999997
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.24 E-value=1.9e-06 Score=76.75 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=82.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec--CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSS--LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~--~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
+.+..+|..-|++.+|+.+++.++.+|.||++.. .....-.+++.+.-+.|.+.+.++..|+ .=|.|+++++..+++
T Consensus 25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ 103 (396)
T KOG1391|consen 25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQ 103 (396)
T ss_pred CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHH
Confidence 4577899999999999999999999999998852 1111223446777788888889999999 799999999999999
Q ss_pred HHhCCCCCeEEEEEeeccc
Q 041111 103 LLQLPPNSCALVVSTENIT 121 (311)
Q Consensus 103 ~i~ag~~~~vLvv~~e~~s 121 (311)
.|.-|.++.+|+.+.|+||
T Consensus 104 ~I~vgea~ivL~GGtEnMS 122 (396)
T KOG1391|consen 104 EICVGEAEIVLCGGTENMS 122 (396)
T ss_pred HhhcCcceEEEecCccccc
Confidence 9999999999999999999
No 134
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.59 E-value=5.4e-05 Score=68.63 Aligned_cols=94 Identities=9% Similarity=0.107 Sum_probs=83.0
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHh
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ 105 (311)
-+-+|+.+|...+|++..++.+.+|.||+++. .+.-..+++...+-..|.+..+++..+. ++|-|.-.|+-....+|+
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmglia 143 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIA 143 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEe
Confidence 35689999999999999999999999999985 3333446778888888998889999999 899999999999999999
Q ss_pred CCCCCeEEEEEeeccc
Q 041111 106 LPPNSCALVVSTENIT 121 (311)
Q Consensus 106 ag~~~~vLvv~~e~~s 121 (311)
+|.++.++..++|.+|
T Consensus 144 tg~~dvivaggvelms 159 (465)
T KOG1392|consen 144 TGNADVIVAGGVELMS 159 (465)
T ss_pred eCCcCEEEEcceeecc
Confidence 9999999999999998
No 135
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.86 E-value=0.00064 Score=62.55 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=46.2
Q ss_pred ccchhHhhHhhcCCcchhhHHHHHHHHH--HhCCCCCCCeEEEEeechhHHHhhheeeEeccCCC
Q 041111 223 VMEPSRMTLYRFGNTSSSCLWYKLAYFE--AKRRIRKGDRTWQIAFGSGFKCNSAVWRALRTINP 285 (311)
Q Consensus 223 ~~~~s~~~~~~~Gn~~sas~~~~L~~~~--~~g~l~~Gd~vll~~~G~G~~~~a~llr~~~~~~~ 285 (311)
|+.+|...-+++||+++||+.+.|..++ .....-.|++|+|.++|+|...+.+-+++.+.-.+
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~~ 207 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAEE 207 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCccc
Confidence 3334555668899999999999999999 33444479999999999999888888877766544
No 136
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.85 E-value=0.0029 Score=67.03 Aligned_cols=242 Identities=16% Similarity=0.174 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCE----EEEEec-C--C------------CCCCc-----HHHHHHHHcCCCCCccee
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGI----LVVNSS-L--F------------NPMPS-----LSAMVVNHYKLRGNILSY 83 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~----ii~~s~-~--~------------~~~p~-----~a~~v~~~lGl~~~~~~~ 83 (311)
...|..++..+|+=++||+|.++.+ +..+++ + . |.+-+ ++.++.-.+.+. .|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCch
Confidence 4578999999999999999988763 554432 1 1 11111 234445556665 6889
Q ss_pred eecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc-----cCcc-----C------CCccchhhheecccceEEEE
Q 041111 84 NFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM-----NWYA-----G------NDRSMLLTNCLFRLGGAAIL 147 (311)
Q Consensus 84 ~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~-----~~~~-----~------~dr~~~~~~~l~GDGAaA~v 147 (311)
.+. .+|+|.+.||+.|.+-+++|.++.+||.++..... .|.+ + .|.. =++..=+||.+|++
T Consensus 165 s~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDea--gnGY~Rseg~~avl 241 (2376)
T KOG1202|consen 165 SVD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEA--GNGYCRSEGVVAVL 241 (2376)
T ss_pred hhh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhcc--CCceeecCceEEEE
Confidence 999 79999999999999999999999999998775432 1211 1 1111 12556689999999
Q ss_pred EecCCCCCCCCccceeeeeecccCCC--Ccch---------HHHHHHHhhccchhhHHHhhhhhhccCCChHHHH-----
Q 041111 148 LSNRSSDRRRSKYELVHTLRTHKGGD--DRSF---------GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLD----- 211 (311)
Q Consensus 148 Ls~~~~~~~~~~~~l~~~~~~~~~~~--~~~~---------g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~----- 211 (311)
|.+....++. -..+++...+.-|.. +..| .+++|..+ +.-++++-|+=.|..+.++-|
T Consensus 242 lqrk~~ArRv-YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~-----Gl~P~sv~YvEAHGtGTkVGDpQEaN 315 (2376)
T KOG1202|consen 242 LQRKSLARRV-YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEA-----GLNPESVVYVEAHGTGTKVGDPQEAN 315 (2376)
T ss_pred EehhHHHHHH-HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhc-----CCCcccEEEEEeccCCCCCCChHHhh
Confidence 9997654321 112333221111211 1122 23333332 222467778888888776642
Q ss_pred HHHHHcC---CCccccchhHhhHhhcCCcchhhHHHHHHHH---HHhC---------------------CC--------C
Q 041111 212 EVEKHLK---LNEWVMEPSRMTLYRFGNTSSSCLWYKLAYF---EAKR---------------------RI--------R 256 (311)
Q Consensus 212 ~~~~~lg---i~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~---~~~g---------------------~l--------~ 256 (311)
.+.+.|= -++=-+ -+...+.||--.||-..+|+.. +|+| ++ -
T Consensus 316 ~it~~fC~~Rt~pLLI---GSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~ 392 (2376)
T KOG1202|consen 316 GITRFFCATRTTPLLI---GSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPW 392 (2376)
T ss_pred hHHHHHhhcCCCceEe---eeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCCc
Confidence 2222221 111111 2334566777777666666543 2222 22 1
Q ss_pred CCCeEEEEeechhHHHhhheeeEeccC
Q 041111 257 KGDRTWQIAFGSGFKCNSAVWRALRTI 283 (311)
Q Consensus 257 ~Gd~vll~~~G~G~~~~a~llr~~~~~ 283 (311)
+|..|-+=+||-|.+-.-.+|+-..-+
T Consensus 393 ~GGivGiNSFGFGGsN~HviLks~~~~ 419 (2376)
T KOG1202|consen 393 RGGIVGINSFGFGGSNAHVILKSNTKP 419 (2376)
T ss_pred cCceeeeeccccCCCceeEEeccCCCC
Confidence 466677788888776555666654433
No 137
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.37 E-value=0.062 Score=47.72 Aligned_cols=113 Identities=15% Similarity=-0.041 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC----------------CCCC---------cHHHHHHHHcCCCCCcce
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLF----------------NPMP---------SLSAMVVNHYKLRGNILS 82 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~----------------~~~p---------~~a~~v~~~lGl~~~~~~ 82 (311)
...|+.+++.+++++. .++|.+|++|..+ ..-| ..+.++.-..|.. .+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cce
Confidence 4567788888887653 4688999997421 1122 2355666666654 578
Q ss_pred eeecCCccchHHHHHHHHHHHHhCCCCCeEEEEEeecccc-cCccCCCccchhhheecccceEEEEEecCCC
Q 041111 83 YNFGGVGCSAGLISIDLAKQLLQLPPNSCALVVSTENITM-NWYAGNDRSMLLTNCLFRLGGAAILLSNRSS 153 (311)
Q Consensus 83 ~~i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~~e~~s~-~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~ 153 (311)
..+. .+-.++..||.-|..+++.| .+.||||++|.... .|..-.+. .....--|.|++|++++.
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~-----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE-----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc-----cCCCcCEEEEEEecCCCC
Confidence 8888 58889999999999999999 89999999998763 23211110 011234588888887665
No 138
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.44 E-value=0.018 Score=43.32 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=43.8
Q ss_pred HHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHHhCCCCCeEEEEE
Q 041111 40 LAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLLQLPPNSCALVVS 116 (311)
Q Consensus 40 L~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i~ag~~~~vLvv~ 116 (311)
|+++|++++|||.++.... .......+.+.+|++++..... ..+.+|++...+|..+..-=+-.+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997642 2234466889999985433222 23346666666665555522233568888887
Q ss_pred e
Q 041111 117 T 117 (311)
Q Consensus 117 ~ 117 (311)
.
T Consensus 77 ~ 77 (90)
T PF08541_consen 77 F 77 (90)
T ss_dssp E
T ss_pred E
Confidence 4
No 139
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=95.19 E-value=0.061 Score=51.04 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCccee-----eecCCccchHHHHHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSY-----NFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~-----~i~~~~Cas~~~Al~~A~~ 102 (311)
....+.++++++|+++|++++|||.+++... ...+...+.++||++++.... .+.+.++++...+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 4556668999999999999999999986532 233556789999997543222 4555677888888877665
Q ss_pred HHhCCCCCeEEEEE
Q 041111 103 LLQLPPNSCALVVS 116 (311)
Q Consensus 103 ~i~ag~~~~vLvv~ 116 (311)
.++. .+++|+++
T Consensus 282 ~~~~--Gd~vll~~ 293 (345)
T TIGR00748 282 IAEP--GDRILAVS 293 (345)
T ss_pred hcCC--CCEEEEEE
Confidence 4443 46777776
No 140
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=94.29 E-value=0.098 Score=51.13 Aligned_cols=142 Identities=11% Similarity=0.028 Sum_probs=67.8
Q ss_pred hheecccceEEEEEecCCCCCCC---CccceeeeeecccCCCCcch-HHHHHHHhhccchhhHHHhhhhhhccCCChH-H
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRR---SKYELVHTLRTHKGGDDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGGRA-V 209 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s~~-~ 209 (311)
.+...+|||+|+||.+.+..... .-.++.+........+.... .....+.+++. ....++|||.+-+|-.-.. .
T Consensus 262 ~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~-aGl~~~did~~ei~daFa~~~ 340 (426)
T PRK08170 262 NSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATPLLQR-HGLTLEDLDLWEINEAFAAQV 340 (426)
T ss_pred ccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHHHHHHH-cCCCHHHcCEEEecchhHHHH
Confidence 46778999999999986532111 11233332111111111111 12233333333 3334689999999986432 2
Q ss_pred HHHHH--HHcC--------------CCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEE-EeechhHHH
Q 041111 210 LDEVE--KHLK--------------LNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQ-IAFGSGFKC 272 (311)
Q Consensus 210 ~~~~~--~~lg--------------i~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~~~ 272 (311)
+-.+. +.+| ++.++++.+--.+ -+||..+|+-...+.++.++=+-..|.+.+. +..|.|. -
T Consensus 341 l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~l-a~GHP~GAtG~~~~~~l~~~l~~~~~~~g~~~~c~~gg~-g 418 (426)
T PRK08170 341 LACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAI-ALGHPVGASGARIVLHLLHALKRRGTKRGIAAICIGGGQ-G 418 (426)
T ss_pred HHHHHHhccccchhcccccccccCCCCcceecCCCCHH-HhCCCccCccHHHHHHHHHHHHhhCCCeEEEEEecCCCh-h
Confidence 21111 2222 3445664322223 3799999888555555544322123444333 2233333 3
Q ss_pred hhheeeE
Q 041111 273 NSAVWRA 279 (311)
Q Consensus 273 ~a~llr~ 279 (311)
.++++++
T Consensus 419 ~a~~~e~ 425 (426)
T PRK08170 419 GAMLLER 425 (426)
T ss_pred heEEEEe
Confidence 4566654
No 141
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.27 E-value=0.24 Score=47.53 Aligned_cols=91 Identities=19% Similarity=0.187 Sum_probs=58.2
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHc-----CCCCCcce---eeecCCccchHHHHH
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHY-----KLRGNILS---YNFGGVGCSAGLISI 97 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~l-----Gl~~~~~~---~~i~~~~Cas~~~Al 97 (311)
+...+...++++++|+++|+.++|||.++.... ...+-..+.++| |++++... -...+.+|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 344556688999999999999999999985532 233445677766 88754322 234445666666677
Q ss_pred HHHHHHHhCCCCCeEEEEEeecc
Q 041111 98 DLAKQLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~ 120 (311)
..+...=+-.+.+++++.+.+..
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEeccc
Confidence 65533111124578888876654
No 142
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=94.11 E-value=0.055 Score=43.65 Aligned_cols=96 Identities=13% Similarity=0.026 Sum_probs=62.2
Q ss_pred HHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeE
Q 041111 182 FKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRT 261 (311)
Q Consensus 182 ~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~v 261 (311)
.+++++. .....+|||.+=+|..=....-...+.+|+++++++.+--.+. +||-.+||-...+.+++.+-+-+.|++.
T Consensus 28 ~~~al~~-ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~g 105 (123)
T PF02803_consen 28 ARKALER-AGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYG 105 (123)
T ss_dssp HHHHHHH-HT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHH-hCCCccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhh
Confidence 3444443 3444689999999998877777788999999999976555555 8999999988888877765333456776
Q ss_pred EEEeechhHHHhhheeeE
Q 041111 262 WQIAFGSGFKCNSAVWRA 279 (311)
Q Consensus 262 ll~~~G~G~~~~a~llr~ 279 (311)
+...-+.|..-.++++|+
T Consensus 106 la~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 106 LAAICAGGGQGSAVLLER 123 (123)
T ss_dssp EEEEEETTTEEEEEEEEE
T ss_pred hHHhcccceeeEEEEEEC
Confidence 654444444445666664
No 143
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.84 E-value=0.2 Score=46.94 Aligned_cols=83 Identities=12% Similarity=0.195 Sum_probs=52.0
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCccee---eecCCccchHHHHHHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSY---NFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~---~i~~~~Cas~~~Al~~A~~~ 103 (311)
.......++++++|+++|++++|||.+++... .......+++.||++++.... ...+.+|++...+|. .+
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~---~~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALF---EA 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHH---HH
Confidence 34455678899999999999999999986532 122346889999998543332 222223333333333 33
Q ss_pred HhCC---CCCeEEEEE
Q 041111 104 LQLP---PNSCALVVS 116 (311)
Q Consensus 104 i~ag---~~~~vLvv~ 116 (311)
++.| +.+++|+++
T Consensus 300 ~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 IKQKKVQRGNKILLLG 315 (329)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 357777776
No 144
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.57 E-value=0.16 Score=47.46 Aligned_cols=83 Identities=14% Similarity=0.197 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i 104 (311)
..+...++++++|+++|++++|||.+++.. ..+.+-..+.++||++++..... ..+.++++...+|.. ++
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~---~~ 297 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSL---AN 297 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHH---HH
Confidence 455667889999999999999999988642 23445577899999985433322 222333444444433 33
Q ss_pred hCC---CCCeEEEEEe
Q 041111 105 QLP---PNSCALVVST 117 (311)
Q Consensus 105 ~ag---~~~~vLvv~~ 117 (311)
+.+ +.+++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 333 3478888773
No 145
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.52 E-value=0.22 Score=46.80 Aligned_cols=87 Identities=10% Similarity=0.169 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i 104 (311)
......++++++|+++|++++|||.+++... .+.....+.+.||++++..... ..|.++++...+|..+.+.=
T Consensus 237 ~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g 312 (338)
T PRK09258 237 GVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEG 312 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhC
Confidence 4456677889999999999999999886532 2345568899999985433322 33334444445554443220
Q ss_pred hCCCCCeEEEEEee
Q 041111 105 QLPPNSCALVVSTE 118 (311)
Q Consensus 105 ~ag~~~~vLvv~~e 118 (311)
+..+.+++|+++.-
T Consensus 313 ~~~~Gd~vll~~~G 326 (338)
T PRK09258 313 FLKPGDRVALLGIG 326 (338)
T ss_pred CCCCCCEEEEEEec
Confidence 01235778877743
No 146
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=93.22 E-value=0.25 Score=46.26 Aligned_cols=80 Identities=10% Similarity=0.170 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeec---CCccchHHHHHHHHHHHHhC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFG---GVGCSAGLISIDLAKQLLQL 106 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~---~~~Cas~~~Al~~A~~~i~a 106 (311)
....++++++|+++|++++|||.+++... .......+.++||++++.....+. +.+|++...+|..+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 45677889999999999999999986632 234456789999998543333332 22334444444333 344
Q ss_pred C---CCCeEEEEE
Q 041111 107 P---PNSCALVVS 116 (311)
Q Consensus 107 g---~~~~vLvv~ 116 (311)
| +.+++|+++
T Consensus 299 g~~~~Gd~vll~~ 311 (326)
T CHL00203 299 NKIQPGQIIVLSG 311 (326)
T ss_pred CCCCCCCEEEEEE
Confidence 3 356777776
No 147
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=93.11 E-value=0.22 Score=46.28 Aligned_cols=81 Identities=17% Similarity=0.267 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeee---cCCccchHHHHHHHHHHHHh
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNF---GGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i---~~~~Cas~~~Al~~A~~~i~ 105 (311)
.+-..++++++|+++|++++|||.+++... .+.....+++.||++++.....+ .+.++++.+.+|..+ ++
T Consensus 218 ~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~---~~ 290 (318)
T TIGR00747 218 VRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL---LR 290 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---HH
Confidence 445677899999999999999999985432 33455788999999853222222 223444555455443 33
Q ss_pred CC---CCCeEEEEE
Q 041111 106 LP---PNSCALVVS 116 (311)
Q Consensus 106 ag---~~~~vLvv~ 116 (311)
+| +.+++|+++
T Consensus 291 ~~~~~~Gd~vll~~ 304 (318)
T TIGR00747 291 TGRIKPGDLLLLVA 304 (318)
T ss_pred cCCCCCCCEEEEEE
Confidence 33 347777776
No 148
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.94 E-value=0.33 Score=45.20 Aligned_cols=80 Identities=13% Similarity=0.215 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHHhC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLLQL 106 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i~a 106 (311)
+...++++++|+++|++++|||.+++... .+.....+.++||++++..... ..+.+|++...+|. .+++.
T Consensus 225 ~~~~~~i~~~L~~~g~~~~did~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~ 297 (325)
T PRK12879 225 RTMPKGARQVLEKAGLTKDDIDWVIPHQA----NLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALEQ 297 (325)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHHc
Confidence 44567889999999999999999986532 2344568899999975332222 22223444444443 33454
Q ss_pred C---CCCeEEEEE
Q 041111 107 P---PNSCALVVS 116 (311)
Q Consensus 107 g---~~~~vLvv~ 116 (311)
| +.+++|+++
T Consensus 298 g~~~~Gd~vll~~ 310 (325)
T PRK12879 298 GKIKPGDTLLLYG 310 (325)
T ss_pred CCCCCCCEEEEEE
Confidence 4 346777776
No 149
>PRK04262 hypothetical protein; Provisional
Probab=92.84 E-value=0.26 Score=46.62 Aligned_cols=82 Identities=23% Similarity=0.299 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcce-----eeecCCccchHHHHHHHHHHH
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILS-----YNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~-----~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+...++++++|+++|++++|||.+++.. ....+-..++++||++++... -...|.++++-..+|..+..-
T Consensus 208 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~ 283 (347)
T PRK04262 208 FKHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV 283 (347)
T ss_pred HHHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh
Confidence 35677899999999999999999988652 233445678899999754322 134444555656666555442
Q ss_pred HhCCCCCeEEEEE
Q 041111 104 LQLPPNSCALVVS 116 (311)
Q Consensus 104 i~ag~~~~vLvv~ 116 (311)
+ .+.+++|+++
T Consensus 284 ~--~~Gd~vll~~ 294 (347)
T PRK04262 284 A--KPGDRILVVS 294 (347)
T ss_pred C--CCCCEEEEEe
Confidence 2 3446666666
No 150
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=92.31 E-value=1.1 Score=42.76 Aligned_cols=99 Identities=16% Similarity=0.224 Sum_probs=69.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC-----CCccee-eecCCccchHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR-----GNILSY-NFGGVGCSAGLISID 98 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~-----~~~~~~-~i~~~~Cas~~~Al~ 98 (311)
.+........|+++.+++.|+.++|.|.+++.. +.+-+...+++.+|.+ +..... .+.+..|+|...+|.
T Consensus 204 ~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~La 279 (377)
T COG3425 204 EPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLA 279 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHH
Confidence 556677888999999999999999999999764 3455556777777765 322222 466678888776654
Q ss_pred HHHHHHhCC-CCCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecC
Q 041111 99 LAKQLLQLP-PNSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNR 151 (311)
Q Consensus 99 ~A~~~i~ag-~~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~ 151 (311)
. -+-++. +.+++|+++ ||.||++-..+-.
T Consensus 280 s--~L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~~ 309 (377)
T COG3425 280 S--LLDNAKLPGDRILLFS----------------------YGSGAGSEAFSIT 309 (377)
T ss_pred H--HHhhcCCCCCEEEEEe----------------------eCCCcceeEEEEE
Confidence 3 333444 557777776 5888888777653
No 151
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=92.20 E-value=0.38 Score=44.58 Aligned_cols=83 Identities=19% Similarity=0.288 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeee---cCCccchHHHHHHHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNF---GGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i---~~~~Cas~~~Al~~A~~~i 104 (311)
..+...++++++|+++|++++|||.+++... .+.....+.+.||++++.....+ .+.++++...+|..+ +
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~---~ 293 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA---I 293 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---H
Confidence 3456778899999999999999999886532 23445678999999754332222 222333444444333 3
Q ss_pred hCC---CCCeEEEEEe
Q 041111 105 QLP---PNSCALVVST 117 (311)
Q Consensus 105 ~ag---~~~~vLvv~~ 117 (311)
+.| +.+++|+++.
T Consensus 294 ~~~~~~~G~~vll~~~ 309 (320)
T cd00830 294 EEGKLKKGDLVLLLGF 309 (320)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 444 4578887773
No 152
>PRK06840 hypothetical protein; Validated
Probab=92.03 E-value=0.68 Score=43.53 Aligned_cols=81 Identities=21% Similarity=0.288 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcce-e-eecCCccchHHHHHHHHHHHHhC
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILS-Y-NFGGVGCSAGLISIDLAKQLLQL 106 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~-~-~i~~~~Cas~~~Al~~A~~~i~a 106 (311)
.....++++++|+++|++++|||.++.... .+..-..+.++||++++... . ...+.++++...+|. .++++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHc
Confidence 345568999999999999999999875432 23344678999999853221 1 222233344444443 33444
Q ss_pred C---CCCeEEEEE
Q 041111 107 P---PNSCALVVS 116 (311)
Q Consensus 107 g---~~~~vLvv~ 116 (311)
| +.+++|+++
T Consensus 309 ~~~~~Gd~ill~~ 321 (339)
T PRK06840 309 GKLKDGDLVVLVS 321 (339)
T ss_pred CCCCCCCEEEEEE
Confidence 3 457777776
No 153
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=91.99 E-value=0.34 Score=46.03 Aligned_cols=87 Identities=15% Similarity=0.165 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCC-Ccc----eeeecCCccchHHHHHHHHHHHH
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRG-NIL----SYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~-~~~----~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
=..++++++|+++|++|+|||.|+...+ ..+.....+..+.+.+|-.. ..+ .-.+...+.+++...+..+...+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999985432 22111122233444444210 111 12233234455656666666777
Q ss_pred hCC--CCCeEEEEEe
Q 041111 105 QLP--PNSCALVVST 117 (311)
Q Consensus 105 ~ag--~~~~vLvv~~ 117 (311)
+.| +..++||.++
T Consensus 315 ~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 315 RKGYGPGPNVLCHLS 329 (348)
T ss_pred HcCcCCCCcEEEEec
Confidence 777 4578888883
No 154
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=91.57 E-value=0.7 Score=44.38 Aligned_cols=81 Identities=14% Similarity=0.219 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHHh
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i~ 105 (311)
.....++++++|+++|++++|||.++.... ...+-..++++||++++..... ..+.++++...+|..+ ++
T Consensus 279 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~ 351 (379)
T PLN02326 279 VRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---VR 351 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---HH
Confidence 344667889999999999999999886532 2334467899999986433322 3333444444455443 34
Q ss_pred CC---CCCeEEEEE
Q 041111 106 LP---PNSCALVVS 116 (311)
Q Consensus 106 ag---~~~~vLvv~ 116 (311)
.| +.+++|+++
T Consensus 352 ~g~~~~Gd~vll~~ 365 (379)
T PLN02326 352 SGKVKKGDVIATAG 365 (379)
T ss_pred cCCCCCCCEEEEEE
Confidence 33 457777776
No 155
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=90.85 E-value=1.2 Score=41.32 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcH-HHHHHHHcCCC---CCcceeeecCCccchHHHHHHHHHHHHh
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSL-SAMVVNHYKLR---GNILSYNFGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~-a~~v~~~lGl~---~~~~~~~i~~~~Cas~~~Al~~A~~~i~ 105 (311)
+...++++++|+++|++++|||.++............ .......++.. .....-.+.+.++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 4556899999999999999999998664321112221 12222233321 0111224454577778888888877777
Q ss_pred CC
Q 041111 106 LP 107 (311)
Q Consensus 106 ag 107 (311)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 65
No 156
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=90.76 E-value=0.93 Score=44.54 Aligned_cols=115 Identities=10% Similarity=-0.013 Sum_probs=66.8
Q ss_pred hheecccceEEEEEecCCCCCCC---C----ccceeeeeecc--cCCCC---cch--HHHHHHHhhccchhhHHHhhhhh
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRR---S----KYELVHTLRTH--KGGDD---RSF--GRKIFKMKIKPYIPNFKLAFEHI 200 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~---~----~~~l~~~~~~~--~~~~~---~~~--g~~~~~~a~~~~~~~~~~did~v 200 (311)
.+...+|||+|+||.+.+..... . ..++.+..... ...+. ..+ .....+.+++. ....++|||.+
T Consensus 254 d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~-AGl~~~DiD~~ 332 (438)
T PTZ00455 254 DCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQKALSM-AGVKPSDLQVA 332 (438)
T ss_pred cCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHHHHHHHHHHHH-cCCCHHHCcEe
Confidence 46778999999999986432110 0 13344432111 10011 111 22333333333 33346899999
Q ss_pred hccCCChHHHHHHHHHcCCCc------------------cccchhHhhHhhcCCcchhhHHHHHHHHHH
Q 041111 201 CIRTGGRAVLDEVEKHLKLNE------------------WVMEPSRMTLYRFGNTSSSCLWYKLAYFEA 251 (311)
Q Consensus 201 ~~h~~s~~~~~~~~~~lgi~~------------------d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~ 251 (311)
=+|-.-.-..-...+.||+.+ .+++.+--. --+||..+|+-...+.++..
T Consensus 333 Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~-la~GHP~gAtG~~~v~e~~~ 400 (438)
T PTZ00455 333 EVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGL-LSFGHPVGATGVKQIMEVYR 400 (438)
T ss_pred eecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCch-hhcCCCcchHHHHHHHHHHH
Confidence 999987666667788999887 345422222 23699998888877777654
No 157
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.75 E-value=0.61 Score=44.57 Aligned_cols=84 Identities=13% Similarity=0.213 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHH-cCCCC--Cc-c--eeeecCCccchHHHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNH-YKLRG--NI-L--SYNFGGVGCSAGLISIDLA 100 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~-lGl~~--~~-~--~~~i~~~~Cas~~~Al~~A 100 (311)
...+...++++++|+++|++++|||.+++... ...+...+.++ ||+.. +. + .-...|.+|++...+|..+
T Consensus 268 ~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~----~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~ 343 (372)
T PRK07515 268 EVCPMVAEHIVEHLAENGLTPADVKRFWLHQA----NINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH 343 (372)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH
Confidence 34556779999999999999999999986532 11222334555 56532 11 1 2233445666776777666
Q ss_pred HHHHhCCCCCeEEEEE
Q 041111 101 KQLLQLPPNSCALVVS 116 (311)
Q Consensus 101 ~~~i~ag~~~~vLvv~ 116 (311)
...++ +.+++|+++
T Consensus 344 ~~~~~--~Gd~vll~~ 357 (372)
T PRK07515 344 SDDLA--AGDLGVICS 357 (372)
T ss_pred hccCC--CCCEEEEEE
Confidence 44333 446777776
No 158
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=90.73 E-value=0.98 Score=44.07 Aligned_cols=74 Identities=19% Similarity=0.313 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC--------CccchHHHHHHHHHHHH
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG--------VGCSAGLISIDLAKQLL 104 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~--------~~Cas~~~Al~~A~~~i 104 (311)
..|++++|+++|++++|||.+.+.- .+........+.+|++. ..+.+++ .|++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987542 12233346667788763 2333332 25566666666667776
Q ss_pred hCCCCCeEE
Q 041111 105 QLPPNSCAL 113 (311)
Q Consensus 105 ~ag~~~~vL 113 (311)
+.| .++.|
T Consensus 392 ~~g-~~~Gl 399 (417)
T PRK06025 392 RRG-LKRGL 399 (417)
T ss_pred HhC-CCeEE
Confidence 655 45553
No 159
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.39 E-value=0.82 Score=42.42 Aligned_cols=81 Identities=15% Similarity=0.205 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceee---ecCCccchHHHHHHHHHHHHh
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYN---FGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~---i~~~~Cas~~~Al~~A~~~i~ 105 (311)
.+...++++++|+++|++++|||.++.... .+..-..+.+.||++++..... ..+.+|++.+..|. ++++
T Consensus 218 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~~~ 290 (319)
T PRK09352 218 VRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EAVR 290 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HHHH
Confidence 344667899999999999999999986532 3345567899999985322221 22233344444443 3344
Q ss_pred CC---CCCeEEEEE
Q 041111 106 LP---PNSCALVVS 116 (311)
Q Consensus 106 ag---~~~~vLvv~ 116 (311)
.| +.+++|+++
T Consensus 291 ~g~~~~Gd~vll~s 304 (319)
T PRK09352 291 DGRIKRGDLVLLEG 304 (319)
T ss_pred cCCCCCCCEEEEEE
Confidence 43 357777776
No 160
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=89.64 E-value=0.58 Score=44.03 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=43.3
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
-+....+..++++++|+++|++++|||.++... .-...-..++++||++++.....+.
T Consensus 218 fk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~ 275 (323)
T COG0332 218 FKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVD 275 (323)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHH
Confidence 345667888999999999999999999998542 2334456789999997655544443
No 161
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=88.57 E-value=1.4 Score=41.93 Aligned_cols=86 Identities=15% Similarity=0.150 Sum_probs=55.5
Q ss_pred cHHHHHHHHHHHHHHHc--CCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcc------eeeecCCccchHHHHHH
Q 041111 27 ETESVIIGAIDELLAKT--GVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNIL------SYNFGGVGCSAGLISID 98 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~a--gl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~------~~~i~~~~Cas~~~Al~ 98 (311)
...+...++++++|+++ |++++|||.+++... ....-..+.++||++++.. .-...+.++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 33456677889999999 999999999886542 2234467899999975421 22444455566666666
Q ss_pred HHHHHHhCCCCCeEEEEE
Q 041111 99 LAKQLLQLPPNSCALVVS 116 (311)
Q Consensus 99 ~A~~~i~ag~~~~vLvv~ 116 (311)
.+...=+-.+.+++++++
T Consensus 332 ~~~~~g~~~~Gd~vll~~ 349 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIA 349 (361)
T ss_pred HHHHhCCCCCCCEEEEEE
Confidence 554321112357777777
No 162
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=88.49 E-value=2.3 Score=37.73 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHH-HHHcCCC---CCcceeeecCCccchHHHHHHHHHHH
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMV-VNHYKLR---GNILSYNFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v-~~~lGl~---~~~~~~~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+...++++++|+++|++++|||.++.... +.. .......+ ....+.. .....-.+.+..++++...|..+...
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI-GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc-ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHH
Confidence 455678899999999999999999886532 111 11111111 1111221 01122234445677777777777766
Q ss_pred HhCC-------CCCeEEEEE
Q 041111 104 LQLP-------PNSCALVVS 116 (311)
Q Consensus 104 i~ag-------~~~~vLvv~ 116 (311)
++.+ +.+++++.+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HhCCCcCCCCCCcCEEEEee
Confidence 6665 445555554
No 163
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=87.90 E-value=1.6 Score=42.73 Aligned_cols=142 Identities=10% Similarity=-0.030 Sum_probs=68.0
Q ss_pred hheecccceEEEEEecCCCCCCC---Cccceee-eeecccCC---CCcch-HHHHHHHhhccchhhHHHhhhhhhccCCC
Q 041111 135 TNCLFRLGGAAILLSNRSSDRRR---SKYELVH-TLRTHKGG---DDRSF-GRKIFKMKIKPYIPNFKLAFEHICIRTGG 206 (311)
Q Consensus 135 ~~~l~GDGAaA~vLs~~~~~~~~---~~~~l~~-~~~~~~~~---~~~~~-g~~~~~~a~~~~~~~~~~did~v~~h~~s 206 (311)
.+...+|||+|+||.+.+..... ..+.+.. ......+. .+... .....+.+++. ....++|||.+=+|..-
T Consensus 260 n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~-AGl~~~Did~~Ei~d~F 338 (427)
T PRK09268 260 NSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVPRLLAR-NGLTLQDFDFYEIHEAF 338 (427)
T ss_pred ccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHHHHHHH-cCCCHHHCCEEEecccc
Confidence 47778999999999986432211 1112211 11001110 11111 12222333332 23336899999888864
Q ss_pred hHH-HHHH--HHHcCC--------------CccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechh
Q 041111 207 RAV-LDEV--EKHLKL--------------NEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSG 269 (311)
Q Consensus 207 ~~~-~~~~--~~~lgi--------------~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G 269 (311)
.-. +-.+ .+.+|+ +..+++.+--.+ -+||...|+-...+.++.++=+-+.|.+.|...-+.|
T Consensus 339 a~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~l-a~GhP~gATG~~~v~e~~~QL~~~~~~~gl~~~c~~g 417 (427)
T PRK09268 339 ASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSL-AAGHPFAATGGRIVATLAKLLAEKGSGRGLISICAAG 417 (427)
T ss_pred HHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHH-hcCCCcccchHHHHHHHHHHHHhcCCCEEEEEEcccC
Confidence 333 2121 233333 223332111111 2699998888888887776533234555554332333
Q ss_pred HHHhhheee
Q 041111 270 FKCNSAVWR 278 (311)
Q Consensus 270 ~~~~a~llr 278 (311)
..-.+++|+
T Consensus 418 G~g~a~~~e 426 (427)
T PRK09268 418 GQGVTAILE 426 (427)
T ss_pred chheEEEEe
Confidence 333455554
No 164
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=86.09 E-value=3 Score=36.98 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=44.3
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCCcceeeec
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-NPMPSLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-~~~p~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
.....+.....++++|.++|++..|+|.|.++..|. +..--++.-+++-|.+..+++.+.++
T Consensus 34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvs 96 (220)
T COG1214 34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVS 96 (220)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeC
Confidence 455667788889999999999999999999998764 22333344444445544456777777
No 165
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=85.79 E-value=2.7 Score=42.01 Aligned_cols=81 Identities=22% Similarity=0.163 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceeeecC-------CccchHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI-LSYNFGG-------VGCSAGLISIDLAKQL 103 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~-~~~~i~~-------~~Cas~~~Al~~A~~~ 103 (311)
...|+++|++++|++++|||.+=+-. .+|.......+.||+.++- ....+++ .+.++++..+.-+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 34699999999999999999986543 2444445566889986431 1333332 1223456666667777
Q ss_pred HhCCCCCeEEEEE
Q 041111 104 LQLPPNSCALVVS 116 (311)
Q Consensus 104 i~ag~~~~vLvv~ 116 (311)
|+....++.|+.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 7755566666654
No 166
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=85.46 E-value=2.7 Score=40.44 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNS 57 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s 57 (311)
...+...++.++.|++.|++++|||.+++..
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~ 232 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHV 232 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECC
Confidence 4556677889999999999999999988664
No 167
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=83.98 E-value=3.1 Score=40.32 Aligned_cols=76 Identities=11% Similarity=0.004 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHHhCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLLQLP 107 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i~ag 107 (311)
-..++.++||+++|+ ++|||.|... +.+......-...+.+.++.+-...--.+...-++++...+..+...|+.|
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence 346899999999999 8999998844 333222223345566666643111111122123345555555566666665
No 168
>PLN03169 chalcone synthase family protein; Provisional
Probab=83.71 E-value=4.9 Score=38.82 Aligned_cols=86 Identities=17% Similarity=0.257 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcce------eeecCCccchHHHHHHHHHH
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILS------YNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~------~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+-....++++|+++|++++|||.+.+... +....+-..++++||++++... -...|+++++-..+|..+..
T Consensus 280 ~~~~~~~i~~~L~~~gl~~~did~~~~v~H--q~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~ 357 (391)
T PLN03169 280 EDNIEGFCKKLMKKAGLVEKDYNDLFWAVH--PGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMRE 357 (391)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCcceEEec--CCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHH
Confidence 344455678999999999999995544322 1234566788999999864332 24455566666667765542
Q ss_pred H--Hh-CCCCCeEEEEE
Q 041111 103 L--LQ-LPPNSCALVVS 116 (311)
Q Consensus 103 ~--i~-ag~~~~vLvv~ 116 (311)
- ++ ..+.+++|+++
T Consensus 358 ~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 358 ELKKKGEEDEEWGLILA 374 (391)
T ss_pred hhcccCCCCCcEEEEEE
Confidence 2 21 11346776665
No 169
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.50 E-value=2 Score=41.82 Aligned_cols=45 Identities=22% Similarity=0.220 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE-EEecCCCCCCcHHHHHHHHcC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILV-VNSSLFNPMPSLSAMVVNHYK 75 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii-~~s~~~~~~p~~a~~v~~~lG 75 (311)
=+.+|.+.||+++|++|+|||.|- .+|++......-...+.+.+|
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 345899999999999999999998 445554434444455666666
No 170
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=82.67 E-value=0.36 Score=38.35 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCC---Ccceee----ecCCccchHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSS-LFNPMPSLSAMVVNHYKLRG---NILSYN----FGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~-~~~~~p~~a~~v~~~lGl~~---~~~~~~----i~~~~Cas~~~Al~~A~~~ 103 (311)
..++++++|+++|++|+|||.|....+ +....+.-...+.+.++-.. .++... +.....++++..|..+..+
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 367899999999999999999985432 21111222334444444221 122221 1223667788888888777
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
++.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 7765
No 171
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=82.08 E-value=1.1 Score=35.50 Aligned_cols=68 Identities=10% Similarity=0.000 Sum_probs=40.9
Q ss_pred HHHHHHhhccchhhHHHhhhhhhccCCChHHHHHH-----HHHcCCCc----cccchhHhhHhhcCCcchhhHHHHHHHH
Q 041111 179 RKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEV-----EKHLKLNE----WVMEPSRMTLYRFGNTSSSCLWYKLAYF 249 (311)
Q Consensus 179 ~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~-----~~~lgi~~----d~~~~s~~~~~~~Gn~~sas~~~~L~~~ 249 (311)
.+.++.+++. ....++|||+|..|..+.+..|.. .+.++-.. -.+ ......+||+.+++-++.|...
T Consensus 28 ~~~i~~al~~-agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v---~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 28 ARAIRRALAD-AGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV---GSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHH-HTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE---E-THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHhh-hccccccceeeeeeccccccchhhhhhhhhhhhcccccccccce---eccccccccccccchHHHHHHH
Confidence 3445555544 444468999999999999987654 34455322 233 5677899999999999998866
Q ss_pred H
Q 041111 250 E 250 (311)
Q Consensus 250 ~ 250 (311)
+
T Consensus 104 ~ 104 (119)
T PF02801_consen 104 L 104 (119)
T ss_dssp H
T ss_pred H
Confidence 4
No 172
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=82.01 E-value=5.7 Score=38.15 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...+++++++++|++|+|||.+-+.- .+........+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 45899999999999999999886431 1122223345667764
No 173
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.54 E-value=4 Score=38.84 Aligned_cols=49 Identities=18% Similarity=0.206 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
..+....+++++|+++|++++|||.+++... ....-..+.++||++++.
T Consensus 240 ~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek 288 (353)
T PRK12880 240 ALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDK 288 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHH
Confidence 3455567899999999999999999986532 234556889999998643
No 174
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=80.89 E-value=5.3 Score=38.21 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCccee-------eecCCccchHHHHHHHHHHH
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSY-------NFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~-------~i~~~~Cas~~~Al~~A~~~ 103 (311)
-...|++++|+++|++++|||.+...- .+........+.+|+.+..... .-. .|+++......+..++
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp-~GatG~~~~~~~~~ql 333 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPYEKLNVNGGAIALGHP-YGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCchhcccCCcHHhccCc-hhhhHHHHHHHHHHHH
Confidence 456799999999999999999987542 2233334556778876321111 112 3556666666666666
Q ss_pred HhCCCCCeEEE
Q 041111 104 LQLPPNSCALV 114 (311)
Q Consensus 104 i~ag~~~~vLv 114 (311)
-+.| .++.++
T Consensus 334 ~~~~-~~~g~~ 343 (361)
T PRK06690 334 KRED-MKYGIA 343 (361)
T ss_pred HHhC-CCEEEE
Confidence 5544 344443
No 175
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=80.79 E-value=5.3 Score=36.91 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=54.4
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-cHHHHHHHHcCCCCC-cc------eeeecCCccchHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-SLSAMVVNHYKLRGN-IL------SYNFGGVGCSAGLIS 96 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-~~a~~v~~~lGl~~~-~~------~~~i~~~~Cas~~~A 96 (311)
.+...+...++++++|++.|++ +|||.++.... .. ..-..+.+++++++. .. .-...+.+|++...+
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQP----NGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCc----hHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 3455677788999999999999 99998775532 22 455778889987421 11 223333455555555
Q ss_pred HHHHHHHHhCCCCCeEEEEEee
Q 041111 97 IDLAKQLLQLPPNSCALVVSTE 118 (311)
Q Consensus 97 l~~A~~~i~ag~~~~vLvv~~e 118 (311)
|..+..--+-.+.+++++++.-
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEec
Confidence 5544322111235788887743
No 176
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=80.06 E-value=4.2 Score=41.08 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceee----ecCCccchHHHHHHHHHHHHhC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYN----FGGVGCSAGLISIDLAKQLLQL 106 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~----i~~~~Cas~~~Al~~A~~~i~a 106 (311)
..++.++||+++|++|+|||.|-.. +.+....+.-...+.+.+|-.+..+... +...-++++...+..+...|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 4588999999999999999998733 4332222223345566666322222221 2222445555555666666776
Q ss_pred C
Q 041111 107 P 107 (311)
Q Consensus 107 g 107 (311)
|
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 6
No 177
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=79.77 E-value=5.8 Score=38.50 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
...|++++|+++|++++|||.+-+.- .++...-...+.||+.+....+..+
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~ 349 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPN 349 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCC
Confidence 35799999999999999999986331 1233334456778875322344444
No 178
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=79.64 E-value=9.6 Score=36.80 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
..|++++|+++|++|+|||.+-+.- .+........+.||+.
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~ 334 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCC
Confidence 5899999999999999999987531 1233334456778864
No 179
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=79.54 E-value=8.4 Score=36.61 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
.-...|++++|+++|++++|||.+-+-. .++...-...+.||+.+
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 3445899999999999999999886542 13344445566777664
No 180
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=79.25 E-value=3.4 Score=39.88 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC-CCcceee----ecCCccchHHHHHHHHHHHHh
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR-GNILSYN----FGGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~----i~~~~Cas~~~Al~~A~~~i~ 105 (311)
..+|+++||+++|++++|||.|-.. +.+....+.-...+.+.+|.. .+++... +.+..+++++..+..+...++
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 4579999999999999999998743 333222333334455556632 1222211 222345666666666777777
Q ss_pred CC
Q 041111 106 LP 107 (311)
Q Consensus 106 ag 107 (311)
.|
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 76
No 181
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=78.23 E-value=4 Score=39.12 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC-CCcceee----ecCCccchHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR-GNILSYN----FGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~----i~~~~Cas~~~Al~~A~~~ 103 (311)
+-..++++++|+++|++++|||.|... +.+....+.-...+.+.++-. ...+... +....+++++..+..+...
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 354 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA 354 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence 345678999999999999999998855 333222333334455555541 0122211 2224678888888888888
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
++.|
T Consensus 355 l~~~ 358 (406)
T cd00834 355 LRDG 358 (406)
T ss_pred HhcC
Confidence 8877
No 182
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=78.17 E-value=6.1 Score=38.05 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC-------CccchHHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG-------VGCSAGLISIDLAKQLL 104 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~-------~~Cas~~~Al~~A~~~i 104 (311)
...|++++++++|++|+|||.+-+.- .++...-...+.||+. . ..+..++ ...++++..+..+...|
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~-~-~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL 361 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLD-L-EKVNVNGGAIALGHPLGASGARIVTTLLHEL 361 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCC-h-hhcCCCCChHhhCCcHHHHHHHHHHHHHHHH
Confidence 35899999999999999999985331 1122222334667763 1 1222221 12234555555555566
Q ss_pred hCCCCCeEEEEE
Q 041111 105 QLPPNSCALVVS 116 (311)
Q Consensus 105 ~ag~~~~vLvv~ 116 (311)
+....++.|+-.
T Consensus 362 ~g~~~~~gl~~~ 373 (386)
T TIGR01930 362 KRRGGRYGLATI 373 (386)
T ss_pred HhcCCCEEEEEE
Confidence 544456666543
No 183
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=77.86 E-value=7 Score=37.95 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
...|++++|+++|++++|||.+-+.- .+....-...+.||+.+....+..+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~ 348 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPN 348 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECC
Confidence 36899999999999999999986331 1222234456678874222344444
No 184
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=77.37 E-value=5.4 Score=32.08 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC--------CccchHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG--------VGCSAGLISIDLAKQL 103 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~--------~~Cas~~~Al~~A~~~ 103 (311)
...|++++|+++|++++|||.+=+.- .+....-...+.+|+.+ ..+.+++ .+|+|....+.++..+
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 35799999999999999999886542 12233345567778763 2333332 2455555555666665
Q ss_pred HhCCCCCeEEE
Q 041111 104 LQLPPNSCALV 114 (311)
Q Consensus 104 i~ag~~~~vLv 114 (311)
-+.+ .++.++
T Consensus 98 ~~~~-~~~gla 107 (123)
T PF02803_consen 98 RRRG-GRYGLA 107 (123)
T ss_dssp HHHT-TSEEEE
T ss_pred HHhc-hhhhhH
Confidence 5543 444443
No 185
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=77.08 E-value=4.7 Score=38.78 Aligned_cols=78 Identities=21% Similarity=0.113 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC-CCcceeee----cCCccchHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR-GNILSYNF----GGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~i----~~~~Cas~~~Al~~A~~~ 103 (311)
+-..+++++||+++|++|+|||.|... +.+....+.-...+.+.+|-. +..+...+ .+...++++..+..+...
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 455789999999999999999998744 333222233334444444421 11222222 223445566666666666
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
++.|
T Consensus 354 l~~~ 357 (407)
T cd00828 354 LEHG 357 (407)
T ss_pred HhcC
Confidence 7765
No 186
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=76.75 E-value=7.6 Score=37.66 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++|+++|++++|||.+-+.- .+....-...+.||+.
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~ 341 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFG 341 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcC
Confidence 46899999999999999999987431 1222223345667765
No 187
>PRK09604 UGMP family protein; Validated
Probab=76.42 E-value=8.6 Score=36.30 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=36.0
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC------cHHHHHHHHcCC
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP------SLSAMVVNHYKL 76 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p------~~a~~v~~~lGl 76 (311)
+...+.....++++|+++|+++.|||.|.++..|.. ++ +.+..++..+++
T Consensus 49 ~~H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~-~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 49 RAHVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGL-VGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HHhHHHHHHHHHHHHHHhCC
Confidence 344566778899999999999999999998876542 22 235555555554
No 188
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=76.41 E-value=6.8 Score=38.03 Aligned_cols=51 Identities=18% Similarity=0.259 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
...|++++|+++|++|+|||.+-+.- .++.......+.||+.+....+..+
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~ 348 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPN 348 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCC
Confidence 35799999999999999999886331 1223334556778875333344444
No 189
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=76.31 E-value=5.6 Score=38.15 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCC-Ccceeee----cCCccchHHHHHHHHHHHHh
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRG-NILSYNF----GGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~-~~~~~~i----~~~~Cas~~~Al~~A~~~i~ 105 (311)
..+++++||+++|++++|||.|... +.+....+.-...+.+.+|-.. +.+...+ .+...++++..+..+...++
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~ 356 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIR 356 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHh
Confidence 5689999999999999999998744 3332223333344556666321 1222111 22234555555556666666
Q ss_pred CC
Q 041111 106 LP 107 (311)
Q Consensus 106 ag 107 (311)
.|
T Consensus 357 ~~ 358 (407)
T TIGR03150 357 DG 358 (407)
T ss_pred cC
Confidence 65
No 190
>PRK05790 putative acyltransferase; Provisional
Probab=76.27 E-value=8.7 Score=36.99 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++++++|++|+|||.+-+.- .+....-...+.||+.
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~ 334 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLD 334 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 35799999999999999999986431 1222223445677764
No 191
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=76.21 E-value=6 Score=38.34 Aligned_cols=43 Identities=26% Similarity=0.334 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
-...|+++||+++|++++|||.+-+.- .+........+.||+.
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~ 340 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLD 340 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 446899999999999999999986331 1222234455678875
No 192
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.39 E-value=4.9 Score=38.73 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceeeec----CCccchHHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYNFG----GVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~----~~~Cas~~~Al~~A~~~i 104 (311)
+...+|++++|+++|++|+|||.|-.. +.+....+.-...+.+.+|- +.+...+. ....+++...+..+...|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l 331 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLAL 331 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHH
Confidence 456799999999999999999998744 43322222223445555652 23332222 123455555666666666
Q ss_pred hCC
Q 041111 105 QLP 107 (311)
Q Consensus 105 ~ag 107 (311)
+.+
T Consensus 332 ~~~ 334 (381)
T PRK05952 332 RHQ 334 (381)
T ss_pred hcC
Confidence 665
No 193
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=75.22 E-value=6.5 Score=38.03 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceeee----cCCccchHHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYNF----GGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~i----~~~~Cas~~~Al~~A~~~i 104 (311)
.-..+|++++|+++|++|++||.|... +.+....+.-...+.+.+|-. +.+...+ ....+++++..+..+..+|
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l 348 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLAL 348 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHH
Confidence 345688999999999999999988744 333323333345566666643 2232222 2223455665666666667
Q ss_pred hCC
Q 041111 105 QLP 107 (311)
Q Consensus 105 ~ag 107 (311)
+.+
T Consensus 349 ~~~ 351 (399)
T cd00832 349 RDG 351 (399)
T ss_pred hCC
Confidence 765
No 194
>PRK09051 beta-ketothiolase; Provisional
Probab=75.04 E-value=8.2 Score=37.35 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++|+++|++++|||.+=+.- .+........+.||+.
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~ 335 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLD 335 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCC
Confidence 46899999999999999999986531 2333344556778875
No 195
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=74.97 E-value=8.1 Score=36.67 Aligned_cols=48 Identities=13% Similarity=0.063 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCC
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKL 76 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl 76 (311)
..-..+|+++||+++|++|+|||.|-.. +.+....+.-...+.+.+|-
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 3456789999999999999999987633 43332333434566666663
No 196
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=74.23 E-value=6.6 Score=37.84 Aligned_cols=73 Identities=21% Similarity=0.189 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceee----ecCCccchHHHHHHHHHHHHhCC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYN----FGGVGCSAGLISIDLAKQLLQLP 107 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~----i~~~~Cas~~~Al~~A~~~i~ag 107 (311)
.++++++|+++|++|+|||.|... +.+....+.-...+.+.+|-. .+... +.+..+++++..+..+...++.|
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 489999999999999999998744 333222233334555556522 22111 22245566666666666677766
No 197
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=73.29 E-value=13 Score=35.63 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++|+++|++++|||.+-.-.. ++.......+.+|+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~----ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDC----FTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCC----CcHHHHHHHHHcCCC
Confidence 447999999999999999999864421 122234455667764
No 198
>PLN02287 3-ketoacyl-CoA thiolase
Probab=73.00 E-value=14 Score=36.49 Aligned_cols=96 Identities=19% Similarity=0.217 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC--------CccchHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG--------VGCSAGLISIDLAKQL 103 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~--------~~Cas~~~Al~~A~~~ 103 (311)
...|++++|+++|++++|||.+=+.- .+....-...+.||+.+ ..+.+++ .|++|....+.++.++
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 46899999999999999999985331 11122223346778752 1222221 2444554455555555
Q ss_pred HhCCC-CCeEEEEEeecccccCccCCCccchhhheecccceEEEEEecCCC
Q 041111 104 LQLPP-NSCALVVSTENITMNWYAGNDRSMLLTNCLFRLGGAAILLSNRSS 153 (311)
Q Consensus 104 i~ag~-~~~vLvv~~e~~s~~~~~~~dr~~~~~~~l~GDGAaA~vLs~~~~ 153 (311)
-+.|. .++.|+.. ..-|--+.|+||++.+.
T Consensus 407 ~~~~~~~~~gl~~~--------------------c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGVVSM--------------------CIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeEEEE--------------------ccccCceeEEEEEecCc
Confidence 55442 13443322 22344567778887654
No 199
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.89 E-value=8.1 Score=37.66 Aligned_cols=76 Identities=13% Similarity=-0.005 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEE-EecCCCCCCcHHHHHHHHcCCCCCcceeeec----CCccchHHHHHHHHHHHHh
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVV-NSSLFNPMPSLSAMVVNHYKLRGNILSYNFG----GVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~-~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~----~~~Cas~~~Al~~A~~~i~ 105 (311)
-..+++++||+++|++|+|||.|-. ++.+....+.-...+.+.+|-. ..+...+. ....++++..+..+..+++
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~ 365 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLALR 365 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHHh
Confidence 3568999999999999999999863 3433323333445667777732 22222221 1223444444445555566
Q ss_pred CC
Q 041111 106 LP 107 (311)
Q Consensus 106 ag 107 (311)
.|
T Consensus 366 ~~ 367 (418)
T PRK07910 366 DG 367 (418)
T ss_pred cC
Confidence 55
No 200
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.50 E-value=6.4 Score=38.42 Aligned_cols=76 Identities=21% Similarity=0.182 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC-CCcceeee----cCCccchHHHHHHHHHHHHh
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR-GNILSYNF----GGVGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~-~~~~~~~i----~~~~Cas~~~Al~~A~~~i~ 105 (311)
..++++++|+++|++|+|||.|... +.+....+.-...+.+.+|-. .+.+...+ .....++++..+..+...|+
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~ 370 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQ 370 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHh
Confidence 5688999999999999999999854 333222222233444445521 12222211 22234555556656666677
Q ss_pred CC
Q 041111 106 LP 107 (311)
Q Consensus 106 ag 107 (311)
.|
T Consensus 371 ~~ 372 (425)
T PRK06501 371 TG 372 (425)
T ss_pred cC
Confidence 66
No 201
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=71.34 E-value=13 Score=34.56 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLF 60 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~ 60 (311)
..+.....++++|+++|++++|||.|.++..|.
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG 80 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPG 80 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 455666778999999999999999999887665
No 202
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=70.84 E-value=15 Score=35.37 Aligned_cols=77 Identities=19% Similarity=0.195 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCC-------cceeeecCCccchHHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGN-------ILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~-------~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
...|++++++++|++++|||.+=+.- .+....-.-.+.||+..+ ..++..- .||+|....+.++.++-
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~d----aFa~~~l~~le~lgl~g~~vN~~GG~la~GHP-~GatG~~~~~~l~~qL~ 361 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNE----AFSIASIIVRDQLKIDNERFNVNGGAVAIGHP-IGNSGSRIIVTLINALK 361 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccc----hhHHHHHHHHHHhCCCCCccCCCCchhhhCCC-cCCCHHHHHHHHHHHHH
Confidence 46899999999999999999876441 122223344556676532 1112222 36666666777777776
Q ss_pred hCCCCCeEEE
Q 041111 105 QLPPNSCALV 114 (311)
Q Consensus 105 ~ag~~~~vLv 114 (311)
+.| .++.|+
T Consensus 362 ~~~-~~~g~~ 370 (388)
T PRK06366 362 TRH-MKTGLA 370 (388)
T ss_pred hcC-CCeEEE
Confidence 554 345444
No 203
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.75 E-value=7.6 Score=37.69 Aligned_cols=78 Identities=13% Similarity=0.005 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCCcceeeec----CCccchHHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGNILSYNFG----GVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~----~~~Cas~~~Al~~A~~~i 104 (311)
.-..+|+++||+++|++|+|||.|-.. +.+....+.-...+.+.+|-....+...+. +.-.++++..+..+...|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l 367 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILAL 367 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHH
Confidence 345689999999999999999998743 433222223334566666621122222221 112344444444555667
Q ss_pred hCC
Q 041111 105 QLP 107 (311)
Q Consensus 105 ~ag 107 (311)
+.|
T Consensus 368 ~~g 370 (424)
T PRK06333 368 RDQ 370 (424)
T ss_pred hcC
Confidence 765
No 204
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.45 E-value=7.7 Score=37.62 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEE-EecCCCCCCcHHHHHHHHcC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVV-NSSLFNPMPSLSAMVVNHYK 75 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~-~s~~~~~~p~~a~~v~~~lG 75 (311)
-..++++++|+++|++|+|||.|.. ++.+....+.-...+.+.+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3468999999999999999999874 34443333444456677776
No 205
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=70.41 E-value=13 Score=36.20 Aligned_cols=78 Identities=9% Similarity=0.002 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHH-cCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC--CCccee----eecCCccchHHHHHHHHH
Q 041111 30 SVIIGAIDELLAK-TGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR--GNILSY----NFGGVGCSAGLISIDLAK 101 (311)
Q Consensus 30 ~la~~A~~~aL~~-agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~--~~~~~~----~i~~~~Cas~~~Al~~A~ 101 (311)
.-..+|+++||++ +|++++|||.|-.. +.+....+.-...+.+.+|-. ...+.. .+.....++++..+..+.
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~ 362 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTI 362 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHH
Confidence 3456899999999 99999999998744 333222222223455555532 112221 122234455666666666
Q ss_pred HHHhCC
Q 041111 102 QLLQLP 107 (311)
Q Consensus 102 ~~i~ag 107 (311)
..|+.|
T Consensus 363 l~l~~~ 368 (421)
T PTZ00050 363 LSLYEQ 368 (421)
T ss_pred HHHHcC
Confidence 667765
No 206
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=69.84 E-value=15 Score=34.47 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=38.2
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC-C----cHHHHHHHHcCCCCCcceeeec
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPM-P----SLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~-p----~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
....+.....++++|+++|++.+|||.|.++..|.... - +.|.-++..++ ++.+.++
T Consensus 47 ~~H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~ 108 (314)
T TIGR03723 47 RAHLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVN 108 (314)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEecc
Confidence 34455667788999999999999999999887665211 1 23444554444 4455555
No 207
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=69.63 E-value=12 Score=36.12 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
.-...|++++++++|++|+|||.+-+-- .++...-...+.||+.
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCC
Confidence 3445799999999999999999986442 1233334455666665
No 208
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=69.50 E-value=20 Score=34.53 Aligned_cols=43 Identities=21% Similarity=0.235 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
-...|++++|+++|++++|||.+=+.- .++...-...+.+|+.
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~ 328 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPD 328 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCC
Confidence 346899999999999999999987542 2333333344677764
No 209
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=69.47 E-value=20 Score=34.67 Aligned_cols=77 Identities=21% Similarity=0.306 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC--------CccchHHHHHHHHHHH
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG--------VGCSAGLISIDLAKQL 103 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~--------~~Cas~~~Al~~A~~~ 103 (311)
...|++++|+++|++++|||.+=+.- .+....-...+.||+.++ .+..++ .||+|...-+.++.++
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999986442 233333455677887532 222221 2455555555666555
Q ss_pred HhCCCCCeEEEE
Q 041111 104 LQLPPNSCALVV 115 (311)
Q Consensus 104 i~ag~~~~vLvv 115 (311)
-..+ .++.|+-
T Consensus 368 ~~~~-~~~gl~~ 378 (394)
T PRK06445 368 QIKG-KDYGVAT 378 (394)
T ss_pred HhcC-CCEEEEE
Confidence 4322 3444443
No 210
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.28 E-value=10 Score=36.88 Aligned_cols=77 Identities=13% Similarity=-0.010 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC--CCcceeeec----CCccchHHHHHHHHHHH
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR--GNILSYNFG----GVGCSAGLISIDLAKQL 103 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~--~~~~~~~i~----~~~Cas~~~Al~~A~~~ 103 (311)
-..+|++++|+++|++|+|||.|-.. +.+....+.-...+.+.+|-. ...+...+. +...++++..+..+...
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~ 358 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHH
Confidence 35688999999999999999998633 433323333345566666521 123333222 12345555555555666
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
|+.|
T Consensus 359 l~~~ 362 (414)
T PRK08722 359 LVDQ 362 (414)
T ss_pred HhcC
Confidence 7765
No 211
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=68.94 E-value=6.2 Score=34.36 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=29.0
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF 60 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~ 60 (311)
....+.....++++|+++|++++|||.|.++..|.
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPG 65 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPG 65 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 34556666789999999999999999999997664
No 212
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=68.86 E-value=15 Score=29.36 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHc-CCCCCcceeeec
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLF--NPMPSLSAMVVNHY-KLRGNILSYNFG 86 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~--~~~p~~a~~v~~~l-Gl~~~~~~~~i~ 86 (311)
..+-.++.+++.+++++||-.|++..+++ ..+|. ..++++ |+. +++.+...
T Consensus 22 t~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA---~a~R~~~g~~-~Vpl~c~~ 75 (118)
T PF07736_consen 22 TRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPA---AAARELPGWD-DVPLMCAQ 75 (118)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TC---HHHHHTTTGT-TSEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChH---HHHHccCCCC-ccceeccC
Confidence 34445666778999999999999998875 45776 444555 887 67777665
No 213
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=68.75 E-value=16 Score=35.55 Aligned_cols=41 Identities=22% Similarity=0.354 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
..|++++|+++|++++|||.+=+.- .+....-...+.||+.
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~ 343 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIP 343 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCC
Confidence 4699999999999999999987531 2333334556788875
No 214
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=68.55 E-value=12 Score=29.77 Aligned_cols=50 Identities=10% Similarity=0.169 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHc-CCCCCcceeeecC
Q 041111 34 GAIDELLAKTGVKPRDIGILVVNSSLF--NPMPSLSAMVVNHY-KLRGNILSYNFGG 87 (311)
Q Consensus 34 ~A~~~aL~~agl~~~dId~ii~~s~~~--~~~p~~a~~v~~~l-Gl~~~~~~~~i~~ 87 (311)
+-.++.+++.+++++||-.|++..+++ ..+|. ..++++ |+. +.+.+....
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qE 76 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQE 76 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCc
Confidence 344566678999999999999998765 45774 556666 987 677766653
No 215
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=68.53 E-value=9.4 Score=37.09 Aligned_cols=42 Identities=17% Similarity=0.272 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|+++||+++|++++|||.+=.. ..++...-...+.||+.
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~ 346 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGID 346 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCC
Confidence 4589999999999999999998422 11222222334677864
No 216
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=67.90 E-value=29 Score=33.49 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|+++|++++|++++|||.+-+-- .+....-...+.||+.
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCC
Confidence 46799999999999999999976542 1233334455667765
No 217
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=67.54 E-value=15 Score=34.74 Aligned_cols=65 Identities=20% Similarity=0.092 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-cHHHHHHHHcCCCCCcceeeecCCccchHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-SLSAMVVNHYKLRGNILSYNFGGVGCSAGLIS 96 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~A 96 (311)
+-....++++|+++|++.+|||+|-+...|.-... ......++.|-+.-+.|.+.|+ -|-+=+.+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a 117 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEA 117 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHH
Confidence 34456689999999999999999988766652211 1122333333333235667777 45554443
No 218
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=67.23 E-value=6.4 Score=34.63 Aligned_cols=42 Identities=21% Similarity=0.292 Sum_probs=30.0
Q ss_pred cCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhh
Q 041111 234 FGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSA 275 (311)
Q Consensus 234 ~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ 275 (311)
.|+-.+-+.|...++.++.-.++||++||=++.|+|+..+.+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455577788888888888878999999999999999876543
No 219
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=66.94 E-value=30 Score=33.37 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++++++|++|+|||.+=+.- .+....-...+.||+.
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~~ 323 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGLL 323 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCCC
Confidence 46789999999999999999876431 1233334445677763
No 220
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=66.26 E-value=27 Score=31.42 Aligned_cols=64 Identities=20% Similarity=0.238 Sum_probs=40.7
Q ss_pred HhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-cHHHHHHHHcC-CCCCcceeeecCCccchHH
Q 041111 24 ARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-SLSAMVVNHYK-LRGNILSYNFGGVGCSAGL 94 (311)
Q Consensus 24 ~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-~~a~~v~~~lG-l~~~~~~~~i~~~~Cas~~ 94 (311)
++.....| ++++|++++++.+|||.|.+.-.|.-..| .....+++.+- +. +.|...++ -|-+-+
T Consensus 49 Hr~~il~L----v~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw-~kPlv~VN--HCigHI 114 (336)
T KOG2708|consen 49 HRAWILGL----VKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLW-NKPLVGVN--HCIGHI 114 (336)
T ss_pred HHHHHHHH----HHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHh-CCCcccch--hhhhhh
Confidence 34444444 67889999999999999987766654444 22334444443 33 56777776 676543
No 221
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=66.15 E-value=14 Score=35.65 Aligned_cols=43 Identities=23% Similarity=0.277 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
....|++++|+++|++++|||.+-+. ..+....-...+.||+.
T Consensus 292 ~~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~ 334 (393)
T PRK08235 292 TPGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGID 334 (393)
T ss_pred hHHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCC
Confidence 34579999999999999999998532 12333334556778875
No 222
>PRK14878 UGMP family protein; Provisional
Probab=65.81 E-value=11 Score=35.49 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-----cHHHHHHHHcCCC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-----SLSAMVVNHYKLR 77 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-----~~a~~v~~~lGl~ 77 (311)
+....+++++|+++|++++|||.|.++..|..... +.+..++..++.+
T Consensus 46 ~~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 46 EVAPELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCCC
Confidence 34448899999999999999999998876642211 2356666666653
No 223
>PRK08256 lipid-transfer protein; Provisional
Probab=65.25 E-value=23 Score=34.12 Aligned_cols=43 Identities=14% Similarity=0.268 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
...|++++++++|++++|||.+-+-- .++...-...+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 45799999999999999999986542 13333344556677664
No 224
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=64.36 E-value=23 Score=33.95 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
..|+++|++++|+.++|||.+-+.- .+....-...+.||+.+
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~ 324 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP 324 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc
Confidence 5799999999999999999985331 12333344566788763
No 225
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=64.31 E-value=6.5 Score=35.90 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-----cHHHHHHHHcCCCCCcceeeec
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-----SLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-----~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
..+.....++++|+++|++++|||.|.++..|..... +.+..++..++ +|.+.++
T Consensus 29 H~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 29 HSENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 3455667889999999999999999999987642211 23344444444 4556665
No 226
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=63.90 E-value=16 Score=35.28 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCC----Ccceeeec----CCccchHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRG----NILSYNFG----GVGCSAGLISIDLA 100 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~----~~~~~~i~----~~~Cas~~~Al~~A 100 (311)
....++++++|+++|++++|||.|... +.+......-...+.+.+|... ..+...+. +...++++..+..+
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 358 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKV 358 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHH
Confidence 345679999999999999999998855 3322112222344555555321 12222222 12334555555556
Q ss_pred HHHHhCC
Q 041111 101 KQLLQLP 107 (311)
Q Consensus 101 ~~~i~ag 107 (311)
...++.|
T Consensus 359 ~~~l~~~ 365 (424)
T smart00825 359 VLALRHG 365 (424)
T ss_pred HHHHhCC
Confidence 6666665
No 227
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=63.68 E-value=16 Score=35.26 Aligned_cols=77 Identities=25% Similarity=0.418 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC--------CccchHHHHHHHHHH
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG--------VGCSAGLISIDLAKQ 102 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~--------~~Cas~~~Al~~A~~ 102 (311)
-...|++++|+++|++++|||.+-+.- .+....-...+.||+.+ ..+.+++ .+++|....+.++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346899999999999999999987441 12222233345778642 1222221 244444445555555
Q ss_pred HHhCCCCCeEEE
Q 041111 103 LLQLPPNSCALV 114 (311)
Q Consensus 103 ~i~ag~~~~vLv 114 (311)
+-+.| .++.|+
T Consensus 364 L~~~~-~~~g~~ 374 (391)
T PRK07661 364 MKRRN-EQFGIV 374 (391)
T ss_pred HHhcC-CCeEEE
Confidence 55544 344443
No 228
>PRK06158 thiolase; Provisional
Probab=63.51 E-value=27 Score=33.55 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++++++|++|+|||.+=+-. .++...-...+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD----~Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYD----AFTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecC----CchHHHHHHHHHcCCC
Confidence 46799999999999999999976442 1222233344556654
No 229
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=63.49 E-value=15 Score=35.88 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
-..+|+++||+++|++++|||.|-..
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 35678999999999999999998744
No 230
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=63.48 E-value=13 Score=35.33 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-----cHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-----SLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-----~~a~~v~~~lGl~ 77 (311)
...+.++||+++|+.|+|+|+|-+...|.-..+ +.|..++..+..+
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 346789999999999999999987665653222 4567777777654
No 231
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=63.45 E-value=22 Score=34.15 Aligned_cols=59 Identities=20% Similarity=0.342 Sum_probs=43.4
Q ss_pred hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC--------cHHHHHHHHcCCC
Q 041111 19 KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP--------SLSAMVVNHYKLR 77 (311)
Q Consensus 19 ~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p--------~~a~~v~~~lGl~ 77 (311)
+.+...+....++-++|+++.++++|+++++||.|=+...+-+..| +.+..|+++.|++
T Consensus 60 ~~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 60 ERLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 4555666677788999999999999999999999864422211111 3468889999986
No 232
>PRK07855 lipid-transfer protein; Provisional
Probab=62.72 E-value=38 Score=32.60 Aligned_cols=25 Identities=24% Similarity=0.372 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
...|+++|++++|++++|||.+-+-
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEec
Confidence 3479999999999999999997644
No 233
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=62.72 E-value=16 Score=35.11 Aligned_cols=79 Identities=18% Similarity=0.165 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC----CCcceee----ecCCccchHHHHHHH
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR----GNILSYN----FGGVGCSAGLISIDL 99 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~----~~~~~~~----i~~~~Cas~~~Al~~ 99 (311)
.+-..+++++||+++|++++|||.|... +.+......-...+.+.++-. ...+... +.+...++++..+..
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~ 357 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIK 357 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHH
Confidence 3445689999999999999999999855 332211122223344444321 0111111 222344566666666
Q ss_pred HHHHHhCC
Q 041111 100 AKQLLQLP 107 (311)
Q Consensus 100 A~~~i~ag 107 (311)
+...++.|
T Consensus 358 ~~~~l~~~ 365 (421)
T cd00833 358 VVLALEHG 365 (421)
T ss_pred HHHHHhcC
Confidence 77777766
No 234
>PRK07937 lipid-transfer protein; Provisional
Probab=62.54 E-value=36 Score=32.44 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=44.0
Q ss_pred HHHHHHHHH-cCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecC-------CccchHHHHHHHHHHHHh
Q 041111 34 GAIDELLAK-TGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGG-------VGCSAGLISIDLAKQLLQ 105 (311)
Q Consensus 34 ~A~~~aL~~-agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~-------~~Cas~~~Al~~A~~~i~ 105 (311)
.++++++++ +|++|+|||.+=+-- .++.......+.||+..+ ..+..++ .+| +++.-+..+...|+
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~ga-tG~~~~~e~~~QL~ 323 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFA-AGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhH-HHHHHHHHHHHHHh
Confidence 444556666 599999999986542 233444556677887422 2333332 122 34545555555666
Q ss_pred CCCCCeEEEEE
Q 041111 106 LPPNSCALVVS 116 (311)
Q Consensus 106 ag~~~~vLvv~ 116 (311)
.+..+++|+.+
T Consensus 324 g~~a~~~l~~~ 334 (352)
T PRK07937 324 DGSARRALAHA 334 (352)
T ss_pred ccCCCEEEEec
Confidence 55567777654
No 235
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=62.26 E-value=17 Score=35.15 Aligned_cols=24 Identities=25% Similarity=0.548 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILV 54 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii 54 (311)
-...|++++|+++|++++|||.+=
T Consensus 296 ~~~~a~~~al~~agl~~~Did~~e 319 (397)
T PRK06954 296 APVGAIRKLFEKNGWRAAEVDLFE 319 (397)
T ss_pred hHHHHHHHHHHHcCCCHHHCCEEe
Confidence 346799999999999999999984
No 236
>PLN03173 chalcone synthase; Provisional
Probab=61.41 E-value=29 Score=33.55 Aligned_cols=49 Identities=10% Similarity=0.136 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
..+.....++++|++.|++++|||.+++-. ..+.+-..+++.||++++.
T Consensus 275 ~~~~~~~~i~~~L~~~gl~~~di~~~v~Hq----gg~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 275 ISKNVEKSLTEAFKPLGISDWNSLFWIAHP----GGPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCeEEECC----CcHHHHHHHHHHcCCChHH
Confidence 345556677888999999999999966432 2445667899999998653
No 237
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=59.77 E-value=25 Score=27.96 Aligned_cols=52 Identities=12% Similarity=0.147 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCCcceeeecC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLF--NPMPSLSAMVVNHYKLRGNILSYNFGG 87 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~--~~~p~~a~~v~~~lGl~~~~~~~~i~~ 87 (311)
.+-.++.+++.+++++||-.|++..+++ ..+|. ..++++|...+++.+....
T Consensus 23 ~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE 76 (117)
T cd02185 23 RELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCc
Confidence 3345566678999999999999998765 45774 6666774333677766653
No 238
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=58.74 E-value=45 Score=32.23 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
.....|++++++++|++++|||.+=+.- .+....-...+.||+.+
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~ 332 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP 332 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC
Confidence 3445699999999999999999985442 13333345567889874
No 239
>PLN03171 chalcone synthase-like protein; Provisional
Probab=58.67 E-value=50 Score=31.98 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=48.7
Q ss_pred hcHHHHHHHHHHHHHHH---------cCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcce-----e-eecCCcc
Q 041111 26 KETESVIIGAIDELLAK---------TGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILS-----Y-NFGGVGC 90 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~---------agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~-----~-~i~~~~C 90 (311)
....++..++++++|++ .|++++||+.++ + +....+-..+.++||++++... + ...|+.+
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~--H---q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV--H---PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE--c---CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 33445665566666665 588888988764 2 1233556788999999864332 2 3333444
Q ss_pred chHHHHHHHHHHHH----hCCCC-CeEEEEE
Q 041111 91 SAGLISIDLAKQLL----QLPPN-SCALVVS 116 (311)
Q Consensus 91 as~~~Al~~A~~~i----~ag~~-~~vLvv~ 116 (311)
+|-..+|..+.+-. +.|.. +++|+++
T Consensus 350 aSip~~L~~~~~~~~~~~~~G~~~d~vll~~ 380 (399)
T PLN03171 350 ATVIFALDELRRQMEEAAAAGAWPELGVMMA 380 (399)
T ss_pred hhHHHHHHHHHhhHhhcCCCCCCcceEEEEE
Confidence 55555665544322 12221 6777766
No 240
>PRK06059 lipid-transfer protein; Provisional
Probab=58.40 E-value=47 Score=32.04 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
...|++++++++|++++|||.+=+-.. +........+.||+.+
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLCP 317 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCCC
Confidence 357899999999999999998864421 1222223346677653
No 241
>PLN03170 chalcone synthase; Provisional
Probab=58.17 E-value=38 Score=32.89 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
..+.....++++|+++|++++|||..++.. ..+.+-..+.+.||++++.
T Consensus 279 ~~~~i~~~v~~~L~~~gl~~~di~~~v~Hq----gg~~il~~v~~~Lgl~~~~ 327 (401)
T PLN03170 279 ISKNIERSLEEAFKPLGITDYNSIFWVAHP----GGPAILDQVEAKVGLEKER 327 (401)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCeEEecC----CcHHHHHHHHHHcCCChHH
Confidence 445555677888999999999998866432 2345567789999998644
No 242
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=58.05 E-value=25 Score=33.96 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
..+++++|+++|++|+|||.+=+.- .+....-...+.||+.
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~ 334 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLD 334 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 4699999999999999999987531 1222233445677764
No 243
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=58.04 E-value=46 Score=32.05 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++++++|++|+|||.+=+.- .+....-...+.||+.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~ 325 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLL 325 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCC
Confidence 46788999999999999999986442 2333334455677763
No 244
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=57.73 E-value=16 Score=34.33 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC-----CcHHHHHHHHcCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPM-----PSLSAMVVNHYKL 76 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~-----p~~a~~v~~~lGl 76 (311)
.....++++|+++|++++|||.|.++..|.... -..+..++..+++
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~ 98 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK 98 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC
Confidence 344558999999999999999999887653211 1235555656664
No 245
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=57.41 E-value=67 Score=31.50 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
..|++++|+++|++++|||.+=+.
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 468999999999999999988644
No 246
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=56.68 E-value=25 Score=34.02 Aligned_cols=24 Identities=25% Similarity=0.462 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
.+++++||+++|++|+|||.|...
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999988744
No 247
>PRK13410 molecular chaperone DnaK; Provisional
Probab=56.63 E-value=41 Score=34.97 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=47.3
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHH
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDL 99 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~ 99 (311)
+...+-..+.++++|+++|+++++||.|++.... ...|.+-..+.+.+|.. +...++...|.....|+..
T Consensus 305 ~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~a 374 (668)
T PRK13410 305 GDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQA 374 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHHH
Confidence 3455556677899999999999999998866321 14788888898888864 2334443345555555443
No 248
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=55.17 E-value=13 Score=32.68 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=31.7
Q ss_pred cCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhh
Q 041111 234 FGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNS 274 (311)
Q Consensus 234 ~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a 274 (311)
+|+--+-|.|...+++++.-.+++|++||=++.|+|+..+.
T Consensus 49 i~~gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 49 IGCGQTISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCCCceecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHHH
Confidence 45555556666777777777899999999999999998654
No 249
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.85 E-value=16 Score=34.87 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE-EEecCCCCCCcHHHHHHHHcCC
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILV-VNSSLFNPMPSLSAMVVNHYKL 76 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii-~~s~~~~~~p~~a~~v~~~lGl 76 (311)
=+..|.++||+++|+.|+|||.|= .+|++....-.-+..+.+-|+-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 466788999999999999999987 3444322122223445555553
No 250
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=52.74 E-value=35 Score=32.71 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
...|++++|+++|++++|||.+-+-. .++...-...+.||+.+
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d----~ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHD----AFTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 45799999999999999999976442 12233344556677653
No 251
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=52.26 E-value=52 Score=31.37 Aligned_cols=53 Identities=11% Similarity=0.130 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC------cHHHHHHHHcCCCCCcceeeec
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP------SLSAMVVNHYKLRGNILSYNFG 86 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p------~~a~~v~~~lGl~~~~~~~~i~ 86 (311)
.+-....++++|+++|++++|||.|.+...|. ..+ +.|.-++..++ +|.+.++
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPG-l~~~LrVG~~~Ak~LA~a~~----~PligV~ 108 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPG-MGAPLSVGAVVARTLSLLWG----KPLVGVN 108 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-cHhhHHHHHHHHHHHHHHcC----CCEeecc
Confidence 34455668899999999999999998887654 122 23444444444 4566666
No 252
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=52.16 E-value=38 Score=32.88 Aligned_cols=26 Identities=31% Similarity=0.488 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
-...|++++|+++|++++|||.+=+.
T Consensus 297 ~~~~a~~~a~~~agl~~~did~~ei~ 322 (401)
T PRK08131 297 GPVEAIKKALARAGLTLDDMDIIEIN 322 (401)
T ss_pred hHHHHHHHHHHHcCCCHHHCCeehhc
Confidence 34689999999999999999988643
No 253
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=52.11 E-value=32 Score=33.28 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVV 55 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~ 55 (311)
....|+++||+++|++|+|||.+=+
T Consensus 291 ~~~~a~~~Al~~AGl~p~DID~~ei 315 (392)
T PRK06633 291 APVPASQKALSKAGWSVNDLEVIEV 315 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcCeeeh
Confidence 3468999999999999999999863
No 254
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=52.05 E-value=64 Score=33.55 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDL 99 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~ 99 (311)
..+-....++++|+++|+++++||.|++.... ..+|.+-..+.+.+|-.+ ...++-..|.....|+.-
T Consensus 332 l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi~a 399 (657)
T PTZ00186 332 LIERSIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAATLG 399 (657)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCCc---cccCCCchHHHHhHHHHH
Confidence 44445567889999999999999999866321 147888889999998642 233442345544444443
No 255
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=51.45 E-value=39 Score=32.64 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...|++++|+++|++++|||.+=+.- .++...-...+.||+.
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~ 312 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLC 312 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCC
Confidence 46899999999999999999876442 1222333444566654
No 256
>PLN03168 chalcone synthase; Provisional
Probab=51.37 E-value=23 Score=34.18 Aligned_cols=67 Identities=21% Similarity=0.067 Sum_probs=41.9
Q ss_pred HHHhhhhhhccCCCh----HHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEe
Q 041111 193 FKLAFEHICIRTGGR----AVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIA 265 (311)
Q Consensus 193 ~~~did~v~~h~~s~----~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 265 (311)
.++|||++++...+. ..--.++++||+++.-.+ .-..|++++..+..|..+..-=+-.++.+||+++
T Consensus 119 ~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r------~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~ 189 (389)
T PLN03168 119 RKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKR------VMMYQTGCFGGASVLRVAKDLAENNKGARVLAVA 189 (389)
T ss_pred CHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCccee------eeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 368999987765443 223467899999865311 1235677777777777664321224577888765
No 257
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=51.01 E-value=37 Score=31.49 Aligned_cols=67 Identities=3% Similarity=0.027 Sum_probs=45.4
Q ss_pred HHhhhhhhccC----CChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 194 KLAFEHICIRT----GGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 194 ~~did~v~~h~----~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
++|||.++.+. +.+.+-..+.+++|+..|-.. -+++=+|++..+++++-+.+-=+..|+.++|+++.
T Consensus 102 p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~------~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 102 PSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKS------YNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVST 172 (290)
T ss_pred HHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeee------ecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 67999876554 456677888999999887541 34556666666666665543334567888888773
No 258
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=50.27 E-value=39 Score=33.10 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 31 VIIGAIDELLAKTGVK--PRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 31 la~~A~~~aL~~agl~--~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
....|++++++++|++ ++|||.+-+-- .++...-...+.||+.+
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D----~Fa~~~l~~lE~lGl~~ 339 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIELHD----AYTSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEeec----CCcHHHHHHHHHcCCCC
Confidence 3458999999999997 79999886542 12233334455666653
No 259
>PLN03184 chloroplast Hsp70; Provisional
Probab=49.70 E-value=58 Score=33.89 Aligned_cols=68 Identities=9% Similarity=0.053 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISID 98 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~ 98 (311)
...+-..+.++++|+++++++++||.|++..... .+|.+-..+.+.+|.. +...++..-|.....|++
T Consensus 343 ~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 343 DLLDRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 3445556678899999999999999998663211 4788888899999864 233445334554444444
No 260
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=49.65 E-value=1.2e+02 Score=31.14 Aligned_cols=51 Identities=14% Similarity=0.179 Sum_probs=38.5
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
+...+=..+.++++|+++|+++.+||.|++.... ...|.+-..+.+.+|..
T Consensus 289 ~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 289 QPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCC
Confidence 3344445677889999999999999999866321 14788888999999865
No 261
>CHL00094 dnaK heat shock protein 70
Probab=49.40 E-value=62 Score=33.27 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=38.2
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
...+-..+.++++|+++|+++++||.|++.... ...|.+-..+.+.+|..
T Consensus 306 ~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 306 DLINRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 344455666889999999999999999866321 24788888899999854
No 262
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=48.89 E-value=65 Score=31.50 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
...|++++|+++|++++|||.+-+.
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 4578999999999999999998654
No 263
>PLN02854 3-ketoacyl-CoA synthase
Probab=47.65 E-value=90 Score=31.50 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHcCCCC------CCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKP------RDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~------~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
+...+++.|.++|+++ ++||+++.-. .....-..+++.||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCC
Confidence 5667889999999987 5788876442 2334556789999997
No 264
>PLN03172 chalcone synthase family protein; Provisional
Probab=47.49 E-value=47 Score=32.12 Aligned_cols=67 Identities=15% Similarity=0.052 Sum_probs=41.0
Q ss_pred HHhhhhhhccCCC----hHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEee
Q 041111 194 KLAFEHICIRTGG----RAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAF 266 (311)
Q Consensus 194 ~~did~v~~h~~s----~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 266 (311)
.+|||+++....+ ..+--.++++||++++-.. -...|+++++.+..|..+..-=+-.++.++|+++.
T Consensus 121 ~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~ 191 (393)
T PLN03172 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR------FMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCS 191 (393)
T ss_pred HHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceE------EeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 6899987643322 2333457899998875210 12456778888888776644222246788887653
No 265
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=47.23 E-value=1.2e+02 Score=31.10 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHH
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISID 98 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~ 98 (311)
..+=..+.++++|+++|+.+++||.|++.... ...|.+-..+.+.+|..+ ...++-.-|.....|+.
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP---LTSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc---CcCCCchHHHHHHHHHH
Confidence 34445566789999999999999999966321 147888888999998652 22344234444444443
No 266
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=46.38 E-value=10 Score=33.23 Aligned_cols=58 Identities=5% Similarity=-0.086 Sum_probs=39.7
Q ss_pred HHhhhhhhccCCCh------------HHHHHHHHHcCCCc-------cccchhHhhHh---hcCCcchhhHHHHHHHHHH
Q 041111 194 KLAFEHICIRTGGR------------AVLDEVEKHLKLNE-------WVMEPSRMTLY---RFGNTSSSCLWYKLAYFEA 251 (311)
Q Consensus 194 ~~did~v~~h~~s~------------~~~~~~~~~lgi~~-------d~~~~s~~~~~---~~Gn~~sas~~~~L~~~~~ 251 (311)
..|+|.|++|+... ..++.|++.+|+.. ++++. .... .--|||||--++.|++..+
T Consensus 114 ~SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr~--~~~~~~~~~E~~GSaQh~LLLdEFYR 191 (204)
T PF12633_consen 114 SSDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFRH--NRSGSPLTGESCGSAQHLLLLDEFYR 191 (204)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHhc--CCcccCCCCCCChHHHHHHHHHHHHH
Confidence 35899999998753 23457788888754 44421 1111 2358999999999999988
Q ss_pred hC
Q 041111 252 KR 253 (311)
Q Consensus 252 ~g 253 (311)
..
T Consensus 192 Ta 193 (204)
T PF12633_consen 192 TA 193 (204)
T ss_pred HH
Confidence 64
No 267
>PRK12404 stage V sporulation protein AD; Provisional
Probab=44.23 E-value=1e+02 Score=29.21 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC------C--ccee------eecCCccchHHH-HH
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG------N--ILSY------NFGGVGCSAGLI-SI 97 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~------~--~~~~------~i~~~~Cas~~~-Al 97 (311)
+.-+.+=|++.|.+|+|-|.|+.+--.. ....+...+.++-|+.- + ...| .-.++||+.... --
T Consensus 209 ~dti~~h~~d~~~~~~~yDlI~TGDLg~-vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~ 287 (334)
T PRK12404 209 VDTIEAHLRDRQIDASYYDLIVTGDLGH-VGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVTY 287 (334)
T ss_pred HHHHHHHHHHhCCChhhccEEEEcchHH-HHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHHH
Confidence 3445566778999999999999773100 01122233333333321 0 1112 222345543332 23
Q ss_pred HHHHHHHhCCCCCeEEEEEeecc
Q 041111 98 DLAKQLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~ 120 (311)
-.-...|+.|..+++|+|++-..
T Consensus 288 g~~~~~~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 288 GHLLNRMKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHHhcCCceEEEEEEchhh
Confidence 45566778899999999986654
No 268
>PLN00415 3-ketoacyl-CoA synthase
Probab=44.20 E-value=61 Score=32.20 Aligned_cols=66 Identities=9% Similarity=-0.003 Sum_probs=40.7
Q ss_pred HHhhhhhhccCCCh---HHH-HHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEe
Q 041111 194 KLAFEHICIRTGGR---AVL-DEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIA 265 (311)
Q Consensus 194 ~~did~v~~h~~s~---~~~-~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 265 (311)
++|||.++...... ..+ -.+.+++|++++-.. -+.+.+|++.-+..|..+.+-=+..++.++|+++
T Consensus 153 p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~------~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs 222 (466)
T PLN00415 153 PREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKT------YNLSGMGCSAGAISVDLATNLLKANPNTYAVIVS 222 (466)
T ss_pred HHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceE------EEeccccchHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 68999887654432 233 457889999854321 3456666666666766654322345678888765
No 269
>PRK08304 stage V sporulation protein AD; Validated
Probab=44.03 E-value=1e+02 Score=29.20 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC-----C--cceee-------ecCCccchHHH-HH
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG-----N--ILSYN-------FGGVGCSAGLI-SI 97 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~-----~--~~~~~-------i~~~~Cas~~~-Al 97 (311)
+.-+.+=|++.|.+|+|-|.|+.+--.. ....+...+.++-|+.- + ...|+ -.++||+.... --
T Consensus 211 ~dti~~h~~d~~~~~~~yDli~tGDlg~-vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~ 289 (337)
T PRK08304 211 ADTIQQHFKDTGRSPEDYDLIVTGDLGR-VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTY 289 (337)
T ss_pred HHHHHHHHHHcCCChhhccEEEEcchHH-HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHH
Confidence 3445566778999999999999873110 01122233333333310 0 12233 11235533322 22
Q ss_pred HHHHHHHhCCCCCeEEEEEeecc
Q 041111 98 DLAKQLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~ 120 (311)
-.-...|+.|..+++|+|++-..
T Consensus 290 ~~~~~~~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 290 GYLLKELQKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHHhcCCceEEEEEEchhh
Confidence 44566777899999999986654
No 270
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=44.00 E-value=15 Score=25.25 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCccccchhHhhHhhcCCcc
Q 041111 208 AVLDEVEKHLKLNEWVMEPSRMTLYRFGNTS 238 (311)
Q Consensus 208 ~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~ 238 (311)
.-++.|++.||++++++ ..-+...||..
T Consensus 21 ~ev~ywa~~~gvt~~~L---~~AV~~vG~~~ 48 (57)
T PF12244_consen 21 YEVRYWAKRFGVTEEQL---REAVRAVGNSR 48 (57)
T ss_pred HHHHHHHHHHCcCHHHH---HHHHHHHCcCH
Confidence 34678999999999999 68999999974
No 271
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=44.00 E-value=33 Score=33.14 Aligned_cols=26 Identities=23% Similarity=0.201 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
....|++++++++|++|+|||.+-+-
T Consensus 256 ~~~~aa~~a~~~AGi~~~did~~ely 281 (388)
T PRK08142 256 GAAWSGPAAFAEAGVTPADIKYASIY 281 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 44689999999999999999986544
No 272
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=43.64 E-value=35 Score=34.23 Aligned_cols=46 Identities=20% Similarity=0.222 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC-----cHHHHHHHHcCCC
Q 041111 32 IIGAIDELLAKTGVKPRDIGILVVNSSLFNPMP-----SLSAMVVNHYKLR 77 (311)
Q Consensus 32 a~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p-----~~a~~v~~~lGl~ 77 (311)
...+++++|+++|++++|||.|.++..|..... +.|..++..++++
T Consensus 52 l~~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~~ 102 (535)
T PRK09605 52 IPKVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDVP 102 (535)
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCCC
Confidence 347789999999999999999988866542111 2345556566643
No 273
>PLN02192 3-ketoacyl-CoA synthase
Probab=42.84 E-value=70 Score=32.20 Aligned_cols=66 Identities=12% Similarity=0.157 Sum_probs=41.0
Q ss_pred HHhhhhhhccCC----ChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEe
Q 041111 194 KLAFEHICIRTG----GRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIA 265 (311)
Q Consensus 194 ~~did~v~~h~~----s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 265 (311)
++|||.+|.... ....--.+.+++|+..+-.. -+++-++++.-+++|+.+..-=+..++.++|+++
T Consensus 195 p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~a------fdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVs 264 (511)
T PLN02192 195 PKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILS------YNLGGMGCSAGLISIDLAKHLLQVHPNSYALVIS 264 (511)
T ss_pred HHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceE------EEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689998876532 23344567899998744221 2456567777777776553322234677888766
No 274
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=42.79 E-value=93 Score=32.02 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISID 98 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~ 98 (311)
...+-..+.++++|+++|+.+.+||.|++..... ..|.+-..+.+.+|... ...++-..|.....|+.
T Consensus 304 ~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 304 DLVERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 3444556678899999999999999998663211 47888888999888642 23344235555555554
No 275
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=42.45 E-value=26 Score=32.13 Aligned_cols=28 Identities=25% Similarity=0.437 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVN 56 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~ 56 (311)
.||...|++++.+++|+.|.||+.|=+-
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 5788999999999999999999988755
No 276
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=41.87 E-value=33 Score=32.83 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=31.9
Q ss_pred HHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 041111 22 AEARKETESVIIGAIDELLAKTGVKPRDIGILVVNS 57 (311)
Q Consensus 22 ~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s 57 (311)
...+|+..+|..+...+++++++|+.+|+|.|+=++
T Consensus 59 eLtresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 59 ELTRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 345788899999999999999999999999998665
No 277
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=41.75 E-value=38 Score=30.22 Aligned_cols=69 Identities=14% Similarity=0.031 Sum_probs=39.1
Q ss_pred HHhhhhhhccC---CChHHHH-HHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEeech
Q 041111 194 KLAFEHICIRT---GGRAVLD-EVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGS 268 (311)
Q Consensus 194 ~~did~v~~h~---~s~~~~~-~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 268 (311)
.+||+++++-. ....-+| .+.+.||++++--+ .. .+.+|++.-.-.|..+.+--+-.||.+||++++=.
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R---~~---i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vEl 191 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQR---TP---IFGMGCAGGAAGLRRAKDIARANPGARVLVVCVEL 191 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEE---EE---EES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEE---EE---EeccchhhHHHHHHHHHHHHhCCccceEEEEEEEe
Confidence 57999887543 2334444 67899999886442 22 45555555555555443322235899999988653
No 278
>PLN02377 3-ketoacyl-CoA synthase
Probab=41.15 E-value=67 Score=32.25 Aligned_cols=66 Identities=6% Similarity=0.091 Sum_probs=38.2
Q ss_pred HHhhhhhhccCC----ChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEe
Q 041111 194 KLAFEHICIRTG----GRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIA 265 (311)
Q Consensus 194 ~~did~v~~h~~----s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 265 (311)
++|||.++.+.. ....--.+.+++|+.++-.. -+++-++++.-+++|+.+.+-=+..++.++|+++
T Consensus 191 p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~a------fdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVs 260 (502)
T PLN02377 191 PKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS------FNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVS 260 (502)
T ss_pred HHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeE------EecccchhhHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 689999887322 23444667899998754321 2344456666666665553211223566777655
No 279
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=40.76 E-value=41 Score=32.50 Aligned_cols=24 Identities=29% Similarity=0.365 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILV 54 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii 54 (311)
-...|++++|+++|++|+|||.+-
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~e 314 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWE 314 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchH
Confidence 346899999999999999999875
No 280
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=39.67 E-value=1.3e+02 Score=28.44 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC--------------CCcceeeecCCccchHHH-HH
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR--------------GNILSYNFGGVGCSAGLI-SI 97 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~--------------~~~~~~~i~~~~Cas~~~-Al 97 (311)
+.-+.+=|++.|.+|+|-|.|+.+--.. ....+...+.++-|+. ++.+ ..-.++||+.... --
T Consensus 205 ~dti~~h~~d~~~~~~~yd~i~tgdlg~-vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~-~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 205 ADTIEAHFKDTGRSVDDYDLIVTGDLAR-VGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQ-VFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHcCCChhhccEEEecchHH-HHHHHHHHHHHHcCCChhhccccCCeEEEcCCCc-ccCCCcccchhHHHHH
Confidence 3445566778999999999999873100 0111222222222221 1122 2223345644332 22
Q ss_pred HHHHHHHhCCCCCeEEEEEeecc
Q 041111 98 DLAKQLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 98 ~~A~~~i~ag~~~~vLvv~~e~~ 120 (311)
-.-...|+.|..+++|+|++-..
T Consensus 283 ~~~~~~~~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKEMLRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHHHhcCcceEEEEEEchhh
Confidence 44566677899999999986654
No 281
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=39.62 E-value=93 Score=31.71 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHH
Q 041111 27 ETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISID 98 (311)
Q Consensus 27 ~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~ 98 (311)
...+-..+.++++|+++|+.+.+||.|++..... ..|.+-..+.+.+|.. ....++-..|..-..|+.
T Consensus 302 ~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 302 DLVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 3445556678899999999999999998663211 4788888899999843 223343234554444554
No 282
>PRK13411 molecular chaperone DnaK; Provisional
Probab=38.26 E-value=1e+02 Score=31.89 Aligned_cols=48 Identities=17% Similarity=0.361 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCC
Q 041111 28 TESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKL 76 (311)
Q Consensus 28 ~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl 76 (311)
..+-..+.++++|+++|+++++||.|++.... ...|.+-..+.+.+|-
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCC
Confidence 34445667889999999999999998866321 1478888889999874
No 283
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=37.24 E-value=1.3e+02 Score=29.10 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 32 IIGAIDELLAKTGVK--PRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 32 a~~A~~~aL~~agl~--~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
...|++++++++|++ ++|||.+=+-- .+....-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 567999999999997 69999976442 12333344556677654
No 284
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=37.22 E-value=87 Score=32.54 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
.+-..+.++++|+++|+++++||.|++.... ...|.+-..+.+.+|..
T Consensus 347 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 347 LKKTIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3444566789999999999999999866321 14788888899988854
No 285
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=36.35 E-value=50 Score=30.91 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc-------ceeee-------cCCccchHHH-HHH
Q 041111 34 GAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI-------LSYNF-------GGVGCSAGLI-SID 98 (311)
Q Consensus 34 ~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~-------~~~~i-------~~~~Cas~~~-Al~ 98 (311)
.-+.+=|++.|.+|+|-|+||.+--.. ....+...+.++-|+.-.. ..|+. .++||+.... ---
T Consensus 207 dTI~~h~~D~g~~p~dYDlIvTGDLg~-vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~g 285 (329)
T PF07451_consen 207 DTIEQHFKDTGRSPDDYDLIVTGDLGK-VGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVLCG 285 (329)
T ss_dssp HHHHHHHHHCT--GGG-SEEEESS-HH-HHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhcCeEEecchHH-HHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHHHH
Confidence 334556778999999999999773100 0112334444444443110 11111 1234533322 223
Q ss_pred HHHHHHhCCCCCeEEEEEeecc
Q 041111 99 LAKQLLQLPPNSCALVVSTENI 120 (311)
Q Consensus 99 ~A~~~i~ag~~~~vLvv~~e~~ 120 (311)
.-...|+.|..+++|+|++=..
T Consensus 286 ~ll~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 286 YLLPKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp CHHHHHHTTS-SEEEEEEEEE-
T ss_pred HHHHHHHcCCceEEEEEEchhh
Confidence 4456678899999999986654
No 286
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=36.25 E-value=1.3e+02 Score=31.30 Aligned_cols=66 Identities=9% Similarity=0.206 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHH
Q 041111 31 VIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDL 99 (311)
Q Consensus 31 la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~ 99 (311)
-..+.++++|+++++++++||.|++.... ...|.+-..+.+.+|-.. ....++-..|.....|+..
T Consensus 314 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~a 379 (653)
T PTZ00009 314 NTLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQA 379 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhhH
Confidence 34456889999999999999998866321 147888888988887431 2233442345544445443
No 287
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=35.51 E-value=1.6e+02 Score=22.95 Aligned_cols=52 Identities=12% Similarity=-0.055 Sum_probs=32.7
Q ss_pred hhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHH
Q 041111 199 HICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFE 250 (311)
Q Consensus 199 ~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~ 250 (311)
+-+--+.+..+.+.+..-..-+...+......+-.+||++..|.++.+...+
T Consensus 58 ~A~~G~~~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 58 CAAQGRFSEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred HHHhCcchHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 3334445555555554433333234433467778899999999999887665
No 288
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=35.45 E-value=63 Score=39.02 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCC----CCccee----eecCCccchHHHHHHHHHHH
Q 041111 33 IGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLR----GNILSY----NFGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 33 ~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~----~~~~~~----~i~~~~Cas~~~Al~~A~~~ 103 (311)
.+++++||+++|++|++||.|-.. +.+....+.-...+.+.||-. ..++.- .|.+..+++|+.++.-+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 689999999999999999988733 433333343344555555521 012222 23334678888888887777
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
++.|
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 7776
No 289
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=34.01 E-value=62 Score=26.58 Aligned_cols=77 Identities=9% Similarity=0.086 Sum_probs=52.0
Q ss_pred HHHHHHHhhccchhhHHHhhhhhhccCCChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCC
Q 041111 178 GRKIFKMKIKPYIPNFKLAFEHICIRTGGRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRK 257 (311)
Q Consensus 178 g~~~~~~a~~~~~~~~~~did~v~~h~~s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~ 257 (311)
|-++|+...+. +.++.+-+|.++...--+..+..+++-.|+|.+++++ .|+...-..-..+-+ ++
T Consensus 28 gGklf~ev~e~-iqeL~d~V~i~IASgDr~gsl~~lae~~gi~~~rv~a------------~a~~e~K~~ii~eLk--k~ 92 (152)
T COG4087 28 GGKLFSEVSET-IQELHDMVDIYIASGDRKGSLVQLAEFVGIPVERVFA------------GADPEMKAKIIRELK--KR 92 (152)
T ss_pred CcEEcHhhHHH-HHHHHHhheEEEecCCcchHHHHHHHHcCCceeeeec------------ccCHHHHHHHHHHhc--CC
Confidence 44566665555 5665555888888888888999999999999998742 233333333333211 27
Q ss_pred CCeEEEEeechh
Q 041111 258 GDRTWQIAFGSG 269 (311)
Q Consensus 258 Gd~vll~~~G~G 269 (311)
+..+++++-|..
T Consensus 93 ~~k~vmVGnGaN 104 (152)
T COG4087 93 YEKVVMVGNGAN 104 (152)
T ss_pred CcEEEEecCCcc
Confidence 888988887765
No 290
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=33.49 E-value=55 Score=31.41 Aligned_cols=59 Identities=19% Similarity=0.384 Sum_probs=40.8
Q ss_pred hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEe-c----CCCCCC-----cHHHHHHHHcCCC
Q 041111 19 KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNS-S----LFNPMP-----SLSAMVVNHYKLR 77 (311)
Q Consensus 19 ~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s-~----~~~~~p-----~~a~~v~~~lGl~ 77 (311)
+.+...+...-++.++|+++.|+++++++++||.|=... + |....+ +....|+++.|++
T Consensus 57 ~~~~~l~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~ 125 (364)
T PF03702_consen 57 DELCELDRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGIT 125 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcC
Confidence 566677778888999999999999999999999986332 2 221112 3478899999986
No 291
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=32.67 E-value=2.2e+02 Score=27.49 Aligned_cols=42 Identities=12% Similarity=0.129 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCCC
Q 041111 33 IGAIDELLAKTGVK--PRDIGILVVNSSLFNPMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 33 ~~A~~~aL~~agl~--~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~ 78 (311)
..|++++++++|++ ++|||.+-+.- .+....-...+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 37999999999997 69999987552 12223334455566543
No 292
>PLN02932 3-ketoacyl-CoA synthase
Probab=30.35 E-value=1.1e+02 Score=30.42 Aligned_cols=66 Identities=6% Similarity=0.105 Sum_probs=40.6
Q ss_pred HHhhhhhhccCC----ChHHHHHHHHHcCCCccccchhHhhHhhcCCcchhhHHHHHHHHHHhCCCCCCCeEEEEe
Q 041111 194 KLAFEHICIRTG----GRAVLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSSCLWYKLAYFEAKRRIRKGDRTWQIA 265 (311)
Q Consensus 194 ~~did~v~~h~~----s~~~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 265 (311)
++|||.+|.... .+.+--.+.+++|++.+-.. -+++-+|++.-+++|+.+..-=+..++.++|+++
T Consensus 167 p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~------fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVs 236 (478)
T PLN02932 167 PSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS------LNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVS 236 (478)
T ss_pred HHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE------EEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689998865543 33444567899999754321 2456677777777777663321223456666554
No 293
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=30.33 E-value=2e+02 Score=27.70 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-ecCCCCCCcHHHHHHHHcCCCCC-cceee----ecCCccchHHHHHHHHHHH
Q 041111 30 SVIIGAIDELLAKTGVKPRDIGILVVN-SSLFNPMPSLSAMVVNHYKLRGN-ILSYN----FGGVGCSAGLISIDLAKQL 103 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~~~dId~ii~~-s~~~~~~p~~a~~v~~~lGl~~~-~~~~~----i~~~~Cas~~~Al~~A~~~ 103 (311)
+-..+|++++|+++|+ ++||.|-.. +.+....+.-...+.+.+|-... .+... +.....++++..+..+...
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~ 351 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMA 351 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHH
Confidence 3456899999999998 689988633 33322223333445666653211 11211 2223445555555555666
Q ss_pred HhCC
Q 041111 104 LQLP 107 (311)
Q Consensus 104 i~ag 107 (311)
++.|
T Consensus 352 l~~~ 355 (406)
T PRK08439 352 MRDG 355 (406)
T ss_pred HhCC
Confidence 7765
No 294
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=30.27 E-value=84 Score=30.20 Aligned_cols=44 Identities=14% Similarity=0.219 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 041111 30 SVIIGAIDELLAKTGVK--PRDIGILVVNSSLFNPMPSLSAMVVNHYKLR 77 (311)
Q Consensus 30 ~la~~A~~~aL~~agl~--~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~ 77 (311)
.....|+++|++++|++ ++|||.+=+-. .++...-...+.||+.
T Consensus 255 ~~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~ 300 (386)
T PRK08313 255 QAGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCC
Confidence 34558999999999997 69999776442 1223333445566655
No 295
>PRK08329 threonine synthase; Validated
Probab=29.02 E-value=67 Score=30.37 Aligned_cols=62 Identities=19% Similarity=0.184 Sum_probs=40.3
Q ss_pred HHHHHHHH----cCCCccccchhHhhHhhcCC---cchhhHHHHHHHHHHhCCCCCCCeEEEEeechhH
Q 041111 209 VLDEVEKH----LKLNEWVMEPSRMTLYRFGN---TSSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGF 270 (311)
Q Consensus 209 ~~~~~~~~----lgi~~d~~~~s~~~~~~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~ 270 (311)
.++.+.+. ..++.+.+......+.+.|- ..++..+..+.++.++|.++++++|+++-.|.|.
T Consensus 276 ~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~gl 344 (347)
T PRK08329 276 MLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGL 344 (347)
T ss_pred HHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCc
Confidence 34444443 44666555332333332222 2377778888888999999999999999999874
No 296
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=28.86 E-value=80 Score=30.41 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=31.7
Q ss_pred HHHhhcHHHHHHHHHHHHHHHcCCCCC-CcCEEEEEe
Q 041111 22 AEARKETESVIIGAIDELLAKTGVKPR-DIGILVVNS 57 (311)
Q Consensus 22 ~~~~e~~~~la~~A~~~aL~~agl~~~-dId~ii~~s 57 (311)
...+|+..+|..+...+++++++++.+ |+|.|+=++
T Consensus 61 eLTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRST 97 (448)
T PF09887_consen 61 ELTRESVAELVRDTLLESHKKAHLDIKKDLDFVVRST 97 (448)
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCCccccceEEEeec
Confidence 345788999999999999999999998 999998665
No 297
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=26.80 E-value=1.4e+02 Score=28.74 Aligned_cols=60 Identities=18% Similarity=0.230 Sum_probs=43.7
Q ss_pred hhHHHHhhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-----C-----CCCcHHHHHHHHcCCCC
Q 041111 19 KNMAEARKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLF-----N-----PMPSLSAMVVNHYKLRG 78 (311)
Q Consensus 19 ~~~~~~~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~-----~-----~~p~~a~~v~~~lGl~~ 78 (311)
.+....++....+-++|++.+|++.++.++||+.|.+-..+. . ..-..+..++++.|++.
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~ 131 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITV 131 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCcc
Confidence 345566777788899999999999999999999766442111 1 11245688999999873
No 298
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=26.76 E-value=2.9e+02 Score=24.68 Aligned_cols=65 Identities=17% Similarity=0.281 Sum_probs=44.6
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
.+....+....+++++++- .-|.|+.+|. .+..++.++++.+|++- |++ -..|..++..++
T Consensus 155 ~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCA---Gms~la~~Lq~~~gvPV------IDg-----v~Aav~~a~~L~ 215 (230)
T COG4126 155 PEEAEALLVIEAAEALKED-----GAEAIILGCA---GMSDLADQLQKAFGVPV------IDG-----VAAAVKLAEGLL 215 (230)
T ss_pred hHHHHHHHHHHHHHHhhhc-----CCCEEEEcCc---cHHHHHHHHHHHhCCCc------ccc-----hHHHHHHHHHHH
Confidence 4555667777777777654 4788999986 34567899999999751 332 445677777777
Q ss_pred hCCC
Q 041111 105 QLPP 108 (311)
Q Consensus 105 ~ag~ 108 (311)
+.|.
T Consensus 216 ~~~~ 219 (230)
T COG4126 216 GMGL 219 (230)
T ss_pred hhch
Confidence 7663
No 299
>PF06089 Asparaginase_II: L-asparaginase II; InterPro: IPR010349 This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (3.5.1.1 from EC) catalyses the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source [].
Probab=25.60 E-value=1.6e+02 Score=27.79 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=46.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHHHH
Q 041111 25 RKETESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQLL 104 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~~i 104 (311)
..+....-+++++..|+++|++++++ .|.++++....+..-..+-|.. ...+. ++|+|=..+|-.++...
T Consensus 74 SH~Ge~~H~~~v~~~L~k~gL~e~~L-----~Cg~~~P~~~~~~~~li~~g~~----p~~l~-~NCSGKHagmLa~c~~~ 143 (324)
T PF06089_consen 74 SHSGEPEHVEAVRSMLAKAGLSEEDL-----QCGPHWPLDEEAREALIRAGGK----PSRLH-NNCSGKHAGMLALCVHL 143 (324)
T ss_pred cccChHHHHHHHHHHHHHcCCCHHHc-----CCCCCCCCCHHHHHHHHhCCCC----CCccc-ccChhHHHHHHHHHHHc
Confidence 34455667789999999999998776 4444444333333333334443 24467 59999999888777764
Q ss_pred h
Q 041111 105 Q 105 (311)
Q Consensus 105 ~ 105 (311)
.
T Consensus 144 g 144 (324)
T PF06089_consen 144 G 144 (324)
T ss_pred C
Confidence 3
No 300
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=25.36 E-value=65 Score=27.40 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=27.1
Q ss_pred hcHHHHHHHHHHHHHHHcCCCCCCcCEEEEEec
Q 041111 26 KETESVIIGAIDELLAKTGVKPRDIGILVVNSS 58 (311)
Q Consensus 26 e~~~~la~~A~~~aL~~agl~~~dId~ii~~s~ 58 (311)
.+...=..+|+++++++.|+++++|+.|.++|+
T Consensus 33 ~d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT 65 (176)
T PF05378_consen 33 DDPAEGILEALDALLEESGIDPSDIDRVRHGTT 65 (176)
T ss_pred cCHHHHHHHHHHhhhcccCCChhhCcEEEeccH
Confidence 445556678888999999999999999999975
No 301
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=24.12 E-value=42 Score=34.40 Aligned_cols=58 Identities=7% Similarity=-0.066 Sum_probs=39.6
Q ss_pred HHhhhhhhccCCCh------------HHHHHHHHHcCCCcc-------ccchhHhhH---hhcCCcchhhHHHHHHHHHH
Q 041111 194 KLAFEHICIRTGGR------------AVLDEVEKHLKLNEW-------VMEPSRMTL---YRFGNTSSSCLWYKLAYFEA 251 (311)
Q Consensus 194 ~~did~v~~h~~s~------------~~~~~~~~~lgi~~d-------~~~~s~~~~---~~~Gn~~sas~~~~L~~~~~ 251 (311)
..|.|.|++|+... ..++.|++.+|+... +++ -.+. -.-+|||++--++.|++..+
T Consensus 115 sSDLD~WVCh~~~Ls~~er~~L~rKc~lie~WA~s~gvEvnffL~D~~RFr--~~~~s~~l~gedcGstQh~LLLDEFYR 192 (853)
T COG3072 115 SSDLDIWVCHQDWLSTEERQLLQRKCSLLEDWAASQGVEVNFFLIDENRFR--QHNESGSLGGEDCGSTQHILLLDEFYR 192 (853)
T ss_pred ccccceEEEecccCChhHHHHHHHHHHHHHHHHHHhCceEEEEEecHHhhh--cccccCCCCCcCCcchhhhHHHHHHHH
Confidence 46889999998752 345678888887643 221 0111 12379999999999999987
Q ss_pred hC
Q 041111 252 KR 253 (311)
Q Consensus 252 ~g 253 (311)
..
T Consensus 193 SA 194 (853)
T COG3072 193 SA 194 (853)
T ss_pred HH
Confidence 53
No 302
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=23.83 E-value=1.3e+02 Score=31.41 Aligned_cols=65 Identities=18% Similarity=0.223 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 34 GAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 34 ~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.-..++|+++++..+||+.|=+.... ...|.+-..|...+|-. ....+++.-|.+-..||+.|..
T Consensus 318 ~p~~~~l~d~~l~~edi~~VEiVGg~-sripaike~Is~~Fgke---~s~TlN~dEavarG~ALqcAIl 382 (727)
T KOG0103|consen 318 VPLLKALADAKLKVEDIHAVEIVGGL-SRIPAIKEMISDFFGKE---LSRTLNQDEAVARGAALQCAIL 382 (727)
T ss_pred HHHHHHHHHhcCccccceeEEEecCc-ccchHHHHHHHHHhCCc---ccccccHHHHHHHhHHHHHHhc
Confidence 34567899999999999987644221 14788889999999965 4455665688888888888765
No 303
>PLN02569 threonine synthase
Probab=22.09 E-value=95 Score=31.00 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=29.8
Q ss_pred chhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhh
Q 041111 238 SSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSA 275 (311)
Q Consensus 238 ~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ 275 (311)
.+|..+..+..+.++|.++++++|+++..|.|.-..-.
T Consensus 407 ssAaalAal~kl~~~g~i~~~~~VV~i~Tg~GlK~~~~ 444 (484)
T PLN02569 407 HTGVALAALKKLRASGVIGPTDRTVVVSTAHGLKFTQS 444 (484)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCcEEEEeCCCcccChhH
Confidence 45666667777888889999999999999999655433
No 304
>PRK07591 threonine synthase; Validated
Probab=21.63 E-value=1.5e+02 Score=28.89 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=40.5
Q ss_pred cCCCccccchhHhhHhh-cCCc---chhhHHHHHHHHHHhCCCCCCCeEEEEeechhHHHhhh
Q 041111 217 LKLNEWVMEPSRMTLYR-FGNT---SSSCLWYKLAYFEAKRRIRKGDRTWQIAFGSGFKCNSA 275 (311)
Q Consensus 217 lgi~~d~~~~s~~~~~~-~Gn~---~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~~~~a~ 275 (311)
..++.+.+......+.+ .|-. .++..+..+..+.++|.++++++|+++-.|.|..--..
T Consensus 334 v~Vsd~ei~~a~~~la~~eGi~~epssaaalAal~~l~~~g~i~~~~~VV~i~tG~G~kd~~~ 396 (421)
T PRK07591 334 EDVTDEEIIEGIKLLARTEGIFTETAGGVTVAVLKKLVEAGKIDPDEETVVYITGNGLKTLEA 396 (421)
T ss_pred EEECHHHHHHHHHHHHhcCCeeecchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCccCCHHH
Confidence 34566655433333333 4444 67777888888888899999999999999988654333
No 305
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=21.31 E-value=3.4e+02 Score=25.86 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=25.5
Q ss_pred hhcHHHHHHHHHHHHHHHcCC-CCCCcCEEEEEe
Q 041111 25 RKETESVIIGAIDELLAKTGV-KPRDIGILVVNS 57 (311)
Q Consensus 25 ~e~~~~la~~A~~~aL~~agl-~~~dId~ii~~s 57 (311)
+.-..+..++|++++++++|| +|.|+-.|-+=|
T Consensus 127 r~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc 160 (365)
T PF09663_consen 127 RMAQVEEVAAAVRAAMADAGITDPADVHFVQVKC 160 (365)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhheeeEEecC
Confidence 344577889999999999999 788776665444
No 306
>PF08784 RPA_C: Replication protein A C terminal; InterPro: IPR014892 This protein corresponds to the C-terminal of the single stranded DNA binding protein RPA (replication protein A). RPA is involved in many DNA metabolic pathways including DNA replication, DNA repair, recombination, cell cycle and DNA damage checkpoints. ; PDB: 1QUQ_C 2PQA_C 3KDF_B 2Z6K_B 2PI2_B 1L1O_E 1DPU_A 1Z1D_A.
Probab=20.74 E-value=61 Score=24.61 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCCccccchhHhhHhhcCCcchh
Q 041111 209 VLDEVEKHLKLNEWVMEPSRMTLYRFGNTSSS 240 (311)
Q Consensus 209 ~~~~~~~~lgi~~d~~~~s~~~~~~~Gn~~sa 240 (311)
-++.+++.|+++.++++...+.+-+-|++++.
T Consensus 67 ~v~~I~~~l~~~~~~v~~al~~L~~eG~IYsT 98 (102)
T PF08784_consen 67 HVDEIAQQLGMSENEVRKALDFLSNEGHIYST 98 (102)
T ss_dssp EHHHHHHHSTS-HHHHHHHHHHHHHTTSEEES
T ss_pred cHHHHHHHhCcCHHHHHHHHHHHHhCCeEecc
Confidence 35777888899998887777778888888764
No 307
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=20.50 E-value=3.7e+02 Score=27.46 Aligned_cols=69 Identities=13% Similarity=0.219 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCcceeeecCCccchHHHHHHHHHH
Q 041111 29 ESVIIGAIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNILSYNFGGVGCSAGLISIDLAKQ 102 (311)
Q Consensus 29 ~~la~~A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~~~~~i~~~~Cas~~~Al~~A~~ 102 (311)
.+=..+-.+++|.++|+++.+|+.|+..... ..+|.+-..+.+.+| + .+.-.++ .-++-..-|...|..
T Consensus 289 l~r~~~~~~~al~~a~l~~~~I~~VilvGGs-triP~V~~~v~~~f~-~--~~~~~in-pdeava~GAa~qa~~ 357 (579)
T COG0443 289 LERTIEPVEQALKDAGLEKSDIDLVILVGGS-TRIPAVQELVKEFFG-K--EPEKSIN-PDEAVALGAAIQAAV 357 (579)
T ss_pred HHHHHHHHHHHHHHcCCChhhCceEEEccce-eccHHHHHHHHHHhC-c--cccccCC-ccHHHHHHHHHHHHh
Confidence 3444566778999999999999999966321 147888889999999 3 2555666 466555555544444
No 308
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=20.45 E-value=1.4e+02 Score=29.18 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=23.3
Q ss_pred HHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCCc
Q 041111 35 AIDELLAKTGVKPRDIGILVVNSSLFNPMPSLSAMVVNHYKLRGNI 80 (311)
Q Consensus 35 A~~~aL~~agl~~~dId~ii~~s~~~~~~p~~a~~v~~~lGl~~~~ 80 (311)
+++-+|+++|++++|||.|+++..-. -.+...=+..+|+=|..
T Consensus 313 Gi~~Ll~~agi~~~di~~v~lAG~FG---~~l~~~~a~~iGLlP~~ 355 (412)
T PF14574_consen 313 GIEILLEEAGISPEDIDRVYLAGGFG---NYLDPESAIRIGLLPDV 355 (412)
T ss_dssp HHHHHHHHTT--GGG--EEEEECSS----SEEEHHHHHHTTSS--S
T ss_pred HHHHHHHHcCCCHHHccEEEEeCccc---ccCCHHHHhhcCCCCCc
Confidence 34556788999999999999885421 11223456677865444
Done!