Query 041113
Match_columns 983
No_of_seqs 622 out of 5204
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:05:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i4k_A Muconate lactonizing en 100.0 9.1E-63 3.1E-67 558.5 34.4 362 490-897 3-376 (383)
2 3dgb_A Muconate cycloisomerase 100.0 6.6E-63 2.3E-67 558.8 32.6 361 490-896 1-375 (382)
3 3r0u_A Enzyme of enolase super 100.0 3.2E-62 1.1E-66 550.8 32.7 348 493-890 3-362 (379)
4 3fcp_A L-Ala-D/L-Glu epimerase 100.0 6E-62 2E-66 551.4 34.7 358 493-897 5-374 (381)
5 3fv9_G Mandelate racemase/muco 100.0 3.3E-62 1.1E-66 553.3 32.5 354 493-892 3-369 (386)
6 4e8g_A Enolase, mandelate race 100.0 6E-62 2.1E-66 550.8 34.4 352 493-891 23-384 (391)
7 3q45_A Mandelate racemase/muco 100.0 9.4E-62 3.2E-66 547.2 33.1 354 493-895 1-364 (368)
8 3u9i_A Mandelate racemase/muco 100.0 1.2E-61 4E-66 548.8 32.8 346 492-885 26-390 (393)
9 3my9_A Muconate cycloisomerase 100.0 4.5E-62 1.5E-66 552.2 29.4 359 492-896 5-373 (377)
10 3i6e_A Muconate cycloisomerase 100.0 1.5E-61 5.1E-66 548.3 32.4 359 492-896 7-374 (385)
11 2chr_A Chloromuconate cycloiso 100.0 8.8E-62 3E-66 550.8 29.6 356 493-894 1-367 (370)
12 3eez_A Putative mandelate race 100.0 4.3E-61 1.5E-65 543.2 33.5 355 492-892 2-364 (378)
13 3s5s_A Mandelate racemase/muco 100.0 9.8E-62 3.4E-66 549.3 27.9 355 492-896 4-370 (389)
14 3dg3_A Muconate cycloisomerase 100.0 5.6E-61 1.9E-65 541.2 34.0 355 493-896 1-366 (367)
15 3ik4_A Mandelate racemase/muco 100.0 8.8E-61 3E-65 538.1 33.3 345 492-884 4-358 (365)
16 4hpn_A Putative uncharacterize 100.0 1.2E-60 4.2E-65 542.5 32.4 366 493-897 1-377 (378)
17 4dye_A Isomerase; enolase fami 100.0 4.4E-60 1.5E-64 536.2 35.8 354 487-894 20-387 (398)
18 3ro6_B Putative chloromuconate 100.0 4.1E-61 1.4E-65 540.0 26.9 345 493-885 1-355 (356)
19 3qld_A Mandelate racemase/muco 100.0 2.7E-60 9.3E-65 537.4 32.4 358 493-903 1-378 (388)
20 1chr_A Chloromuconate cycloiso 100.0 7.5E-61 2.6E-65 541.3 27.4 356 493-895 1-368 (370)
21 4h2h_A Mandelate racemase/muco 100.0 1.1E-59 3.9E-64 532.3 35.8 347 493-884 10-365 (376)
22 3jva_A Dipeptide epimerase; en 100.0 1.2E-59 4.1E-64 527.7 32.0 339 493-881 1-352 (354)
23 3ozy_A Putative mandelate race 100.0 3.3E-59 1.1E-63 529.9 34.5 363 493-897 3-377 (389)
24 3mwc_A Mandelate racemase/muco 100.0 8.1E-60 2.8E-64 535.6 29.2 357 493-902 7-391 (400)
25 3gd6_A Muconate cycloisomerase 100.0 1.6E-58 5.5E-63 524.6 35.4 350 493-897 1-371 (391)
26 4h83_A Mandelate racemase/muco 100.0 4.2E-59 1.4E-63 528.9 29.2 358 492-897 19-387 (388)
27 3vc5_A Mandelate racemase/muco 100.0 5.9E-58 2E-62 523.5 38.0 353 492-894 22-410 (441)
28 4dwd_A Mandelate racemase/muco 100.0 2.2E-58 7.5E-63 522.0 34.1 356 493-899 3-373 (393)
29 3vdg_A Probable glucarate dehy 100.0 1E-57 3.4E-62 521.5 38.9 357 492-894 27-414 (445)
30 4e4u_A Mandalate racemase/muco 100.0 4.9E-58 1.7E-62 522.4 35.7 356 493-898 1-384 (412)
31 4e5t_A Mandelate racemase / mu 100.0 3.1E-58 1.1E-62 523.9 33.0 363 492-904 1-396 (404)
32 3toy_A Mandelate racemase/muco 100.0 2.8E-58 9.6E-63 520.0 31.9 349 491-895 25-382 (383)
33 4h1z_A Enolase Q92ZS5; dehydra 100.0 1.3E-58 4.5E-63 528.4 29.2 367 487-893 20-409 (412)
34 2ps2_A Putative mandelate race 100.0 6.5E-58 2.2E-62 518.8 33.4 357 490-893 1-366 (371)
35 3ugv_A Enolase; enzyme functio 100.0 2.8E-58 9.7E-63 521.2 29.9 353 490-895 25-389 (390)
36 3sjn_A Mandelate racemase/muco 100.0 6.5E-58 2.2E-62 517.1 32.0 353 493-895 3-373 (374)
37 3rcy_A Mandelate racemase/muco 100.0 5.7E-58 2E-62 523.9 31.9 353 493-898 2-383 (433)
38 3ddm_A Putative mandelate race 100.0 1.8E-58 6E-63 523.3 26.5 360 493-897 10-384 (392)
39 3tj4_A Mandelate racemase; eno 100.0 1.2E-57 4.1E-62 514.5 32.3 356 493-896 1-370 (372)
40 1wue_A Mandelate racemase/muco 100.0 1.2E-57 3.9E-62 518.2 31.5 352 492-896 19-382 (386)
41 3v3w_A Starvation sensing prot 100.0 2.5E-57 8.6E-62 518.5 32.8 353 485-896 15-407 (424)
42 3va8_A Probable dehydratase; e 100.0 6.3E-57 2.1E-61 514.9 35.9 354 492-894 26-414 (445)
43 3mkc_A Racemase; metabolic pro 100.0 1.4E-57 4.7E-62 516.9 29.5 357 486-894 4-387 (394)
44 1tkk_A Similar to chloromucona 100.0 4E-57 1.4E-61 511.8 32.9 346 493-884 1-357 (366)
45 3tji_A Mandelate racemase/muco 100.0 4.5E-57 1.6E-61 515.4 33.2 349 490-896 24-403 (422)
46 1nu5_A Chloromuconate cycloiso 100.0 3.8E-57 1.3E-61 512.8 32.2 356 493-895 1-368 (370)
47 2p8b_A Mandelate racemase/muco 100.0 2.9E-57 9.9E-62 513.5 31.1 355 493-897 1-365 (369)
48 2qde_A Mandelate racemase/muco 100.0 9.6E-57 3.3E-61 513.1 35.5 360 493-896 3-380 (397)
49 1wuf_A Hypothetical protein LI 100.0 2.4E-57 8.1E-62 516.4 29.7 353 491-896 18-382 (393)
50 3v5c_A Mandelate racemase/muco 100.0 6.1E-57 2.1E-61 510.0 32.2 337 492-897 11-381 (392)
51 2rdx_A Mandelate racemase/muco 100.0 2.7E-56 9.1E-61 506.7 36.6 357 493-897 3-368 (379)
52 3r4e_A Mandelate racemase/muco 100.0 9E-57 3.1E-61 513.6 32.7 348 490-896 14-401 (418)
53 3sbf_A Mandelate racemase / mu 100.0 8.3E-57 2.8E-61 512.3 32.2 347 492-896 5-382 (401)
54 3vcn_A Mannonate dehydratase; 100.0 5.9E-57 2E-61 515.6 31.1 346 492-896 23-408 (425)
55 3mqt_A Mandelate racemase/muco 100.0 3.8E-57 1.3E-61 513.8 29.3 355 492-897 4-385 (394)
56 3t6c_A RSPA, putative MAND fam 100.0 1.1E-56 3.6E-61 514.4 33.0 349 490-896 24-421 (440)
57 4hnl_A Mandelate racemase/muco 100.0 1.5E-56 5.2E-61 514.4 33.7 352 488-897 21-403 (421)
58 2qdd_A Mandelate racemase/muco 100.0 3.7E-56 1.3E-60 505.3 36.3 355 493-895 3-367 (378)
59 2gdq_A YITF; mandelate racemas 100.0 1.9E-56 6.6E-61 507.5 30.9 355 490-900 1-374 (382)
60 3go2_A Putative L-alanine-DL-g 100.0 1E-55 3.5E-60 504.1 33.6 347 493-897 3-391 (409)
61 3rr1_A GALD, putative D-galact 100.0 4E-56 1.4E-60 504.9 29.3 349 493-897 2-365 (405)
62 3lq1_A 2-succinyl-5-enolpyruvy 100.0 2.4E-55 8.3E-60 526.8 37.1 416 3-462 153-570 (578)
63 3ijl_A Muconate cycloisomerase 100.0 9.2E-57 3.1E-61 500.1 21.6 328 497-883 2-337 (338)
64 2pgw_A Muconate cycloisomerase 100.0 2E-55 7E-60 500.3 33.1 359 490-896 1-371 (384)
65 4a35_A Mitochondrial enolase s 100.0 1E-55 3.5E-60 505.8 30.6 373 489-897 1-431 (441)
66 1sjd_A N-acylamino acid racema 100.0 1.7E-55 5.8E-60 498.8 31.9 352 493-898 1-364 (368)
67 1r0m_A N-acylamino acid racema 100.0 2.5E-55 8.5E-60 498.4 32.6 352 493-898 8-371 (375)
68 3dip_A Enolase; structural gen 100.0 4.1E-55 1.4E-59 498.6 33.7 348 490-896 1-394 (410)
69 3stp_A Galactonate dehydratase 100.0 2.2E-55 7.4E-60 499.4 29.3 361 490-895 20-410 (412)
70 2zc8_A N-acylamino acid racema 100.0 1.9E-55 6.5E-60 498.6 28.5 353 493-899 1-365 (369)
71 4e4f_A Mannonate dehydratase; 100.0 1E-54 3.5E-59 496.6 32.9 347 491-896 21-409 (426)
72 3cyj_A Mandelate racemase/muco 100.0 3.8E-55 1.3E-59 495.5 28.9 350 490-896 3-365 (372)
73 3p0w_A Mandelate racemase/muco 100.0 1.4E-54 4.8E-59 498.9 33.7 357 492-895 7-428 (470)
74 3bjs_A Mandelate racemase/muco 100.0 1.8E-54 6.1E-59 496.7 34.5 358 492-896 38-411 (428)
75 4dxk_A Mandelate racemase / mu 100.0 3.5E-55 1.2E-59 498.2 28.1 348 493-898 1-393 (400)
76 3mzn_A Glucarate dehydratase; 100.0 3.4E-54 1.2E-58 494.5 33.5 354 493-894 5-408 (450)
77 3pfr_A Mandelate racemase/muco 100.0 2.4E-54 8.3E-59 496.3 32.2 356 492-894 8-412 (455)
78 2x7j_A 2-succinyl-5-enolpyruvy 100.0 7.1E-54 2.4E-58 516.7 37.6 424 2-469 172-597 (604)
79 2ovl_A Putative racemase; stru 100.0 2.6E-54 8.7E-59 489.0 31.6 352 493-896 2-363 (371)
80 2zad_A Muconate cycloisomerase 100.0 5E-54 1.7E-58 482.0 32.5 329 493-871 2-336 (345)
81 2qgy_A Enolase from the enviro 100.0 6.2E-54 2.1E-58 488.4 33.6 352 493-895 11-374 (391)
82 2nql_A AGR_PAT_674P, isomerase 100.0 7.6E-54 2.6E-58 487.6 33.4 357 493-895 3-387 (388)
83 1mdl_A Mandelate racemase; iso 100.0 9.6E-54 3.3E-58 482.8 33.0 349 490-894 1-358 (359)
84 3tcs_A Racemase, putative; PSI 100.0 3.1E-54 1.1E-58 486.6 28.7 346 492-896 22-384 (388)
85 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 5.2E-54 1.8E-58 486.6 30.2 342 493-871 3-362 (377)
86 3eya_A Pyruvate dehydrogenase 100.0 2.5E-54 8.6E-59 515.2 29.1 394 1-455 136-532 (549)
87 4g8t_A Glucarate dehydratase; 100.0 1.5E-53 5.2E-58 492.3 32.0 361 489-893 22-428 (464)
88 2o56_A Putative mandelate race 100.0 1.6E-53 5.4E-58 489.0 30.1 358 490-896 1-396 (407)
89 1rvk_A Isomerase/lactonizing e 100.0 6.5E-53 2.2E-57 480.1 34.5 355 493-895 1-381 (382)
90 2og9_A Mandelate racemase/muco 100.0 3.3E-53 1.1E-57 482.8 31.4 359 492-901 12-382 (393)
91 2pp0_A L-talarate/galactarate 100.0 3E-53 1E-57 483.4 29.6 357 493-900 26-394 (398)
92 2poz_A Putative dehydratase; o 100.0 1.9E-52 6.5E-57 477.2 32.4 350 493-896 3-381 (392)
93 3hww_A 2-succinyl-5-enolpyruvy 100.0 1.9E-52 6.6E-57 499.3 32.1 406 2-467 148-554 (556)
94 3p3b_A Mandelate racemase/muco 100.0 2E-52 6.9E-57 475.6 28.9 337 492-897 11-381 (392)
95 2gl5_A Putative dehydratase pr 100.0 2.7E-52 9.2E-57 479.2 29.9 356 493-896 3-399 (410)
96 4feg_A Pyruvate oxidase; carba 100.0 6E-53 2.1E-57 508.1 25.6 396 1-453 145-547 (603)
97 1ozh_A ALS, acetolactate synth 100.0 6.1E-53 2.1E-57 504.7 25.1 396 2-455 144-546 (566)
98 1ybh_A Acetolactate synthase, 100.0 3.1E-53 1.1E-57 510.2 21.5 403 1-455 145-561 (590)
99 2hzg_A Mandelate racemase/muco 100.0 3.7E-53 1.3E-57 484.1 21.0 354 493-896 3-377 (401)
100 2qq6_A Mandelate racemase/muco 100.0 3.9E-52 1.3E-56 477.0 29.0 351 490-899 3-395 (410)
101 2oz8_A MLL7089 protein; struct 100.0 7.8E-52 2.7E-56 470.8 30.5 353 493-903 3-368 (389)
102 2ox4_A Putative mandelate race 100.0 7.7E-52 2.6E-56 474.3 29.5 351 493-895 3-389 (403)
103 1v5e_A Pyruvate oxidase; oxido 100.0 1.2E-51 4.2E-56 495.4 32.5 397 1-454 138-541 (590)
104 2iht_A Carboxyethylarginine sy 100.0 9E-53 3.1E-57 504.4 22.5 402 1-452 144-561 (573)
105 2uz1_A Benzaldehyde lyase; thi 100.0 3.6E-52 1.2E-56 498.5 26.9 398 1-457 137-551 (563)
106 3ekg_A Mandelate racemase/muco 100.0 1E-51 3.6E-56 464.7 27.7 347 489-889 2-390 (404)
107 3fxg_A Rhamnonate dehydratase; 100.0 1.7E-51 6E-56 466.0 28.9 359 493-901 9-405 (455)
108 1t9b_A Acetolactate synthase, 100.0 2.2E-52 7.6E-57 505.6 21.8 407 1-455 215-640 (677)
109 1tzz_A Hypothetical protein L1 100.0 8.2E-51 2.8E-55 463.3 30.7 348 493-894 6-388 (392)
110 2okt_A OSB synthetase, O-succi 100.0 6.1E-52 2.1E-56 463.4 21.0 320 493-884 2-331 (342)
111 2pgn_A Cyclohexane-1,2-dione h 100.0 3.9E-52 1.3E-56 500.1 19.7 400 1-456 138-551 (589)
112 2pan_A Glyoxylate carboligase; 100.0 1.2E-51 4.2E-56 498.8 20.4 401 1-454 161-582 (616)
113 2hxt_A L-fuconate dehydratase; 100.0 2.3E-50 7.8E-55 466.0 30.0 373 493-897 2-426 (441)
114 4gfi_A Mandelate racemase/muco 100.0 6.5E-51 2.2E-55 453.0 23.5 321 495-879 4-327 (329)
115 1jpd_X L-Ala-D/L-Glu epimerase 100.0 2.3E-50 8E-55 447.1 26.2 313 494-871 3-318 (324)
116 2c31_A Oxalyl-COA decarboxylas 100.0 2.3E-50 7.7E-55 483.5 26.1 405 1-464 144-559 (568)
117 1q6z_A BFD, BFDC, benzoylforma 100.0 1.1E-51 3.7E-56 491.0 14.3 390 1-454 134-527 (528)
118 1r6w_A OSB synthase, O-succiny 100.0 2.8E-49 9.4E-54 437.8 31.4 302 494-870 2-308 (322)
119 2wvg_A PDC, pyruvate decarboxy 100.0 7E-51 2.4E-55 487.9 18.8 404 1-471 143-560 (568)
120 2vbi_A Pyruvate decarboxylase; 100.0 6.4E-51 2.2E-55 488.0 18.5 399 1-469 143-550 (566)
121 3caw_A O-succinylbenzoate synt 100.0 9.6E-49 3.3E-53 435.3 31.2 306 493-895 2-324 (330)
122 2q28_A Oxalyl-COA decarboxylas 100.0 7.8E-50 2.7E-54 478.8 22.1 400 1-458 142-550 (564)
123 1ovm_A Indole-3-pyruvate decar 100.0 2.1E-50 7.3E-55 482.8 13.3 399 1-469 144-549 (552)
124 2vk8_A Pyruvate decarboxylase 100.0 1.1E-50 3.7E-55 486.1 7.7 403 1-469 144-559 (563)
125 2vbf_A Branched-chain alpha-ke 100.0 1.2E-49 4.2E-54 477.3 13.7 395 1-468 164-567 (570)
126 2p3z_A L-rhamnonate dehydratas 100.0 2.8E-47 9.6E-52 432.6 24.8 270 524-833 68-347 (415)
127 2nxw_A Phenyl-3-pyruvate decar 100.0 7.1E-49 2.4E-53 469.4 11.8 392 1-469 160-559 (565)
128 2ozt_A TLR1174 protein; struct 100.0 5E-47 1.7E-51 421.1 23.1 295 497-862 4-307 (332)
129 1kcz_A Beta-methylaspartase; b 100.0 4.6E-47 1.6E-51 434.1 19.1 306 508-832 36-380 (413)
130 1kko_A 3-methylaspartate ammon 100.0 3E-46 1E-50 426.0 21.6 299 510-831 38-379 (413)
131 2opj_A O-succinylbenzoate-COA 100.0 1E-42 3.5E-47 384.0 24.6 289 497-897 2-296 (327)
132 2pa6_A Enolase; glycolysis, ly 100.0 1.2E-42 4.3E-47 398.8 18.2 306 493-833 9-389 (427)
133 2fym_A Enolase; RNA degradosom 100.0 1.1E-42 3.7E-47 398.9 17.2 304 493-832 1-390 (431)
134 1w6t_A Enolase; bacterial infe 100.0 1.2E-40 4.1E-45 382.5 18.9 303 494-832 13-402 (444)
135 2ptz_A Enolase; lyase, glycoly 100.0 7E-40 2.4E-44 373.8 17.2 307 491-832 2-395 (432)
136 3uj2_A Enolase 1; enzyme funct 100.0 2.6E-38 8.9E-43 358.3 18.2 304 493-831 26-411 (449)
137 3tqp_A Enolase; energy metabol 100.0 1.6E-36 5.3E-41 342.3 21.4 305 493-831 3-385 (428)
138 3qn3_A Enolase; structural gen 100.0 4.8E-37 1.6E-41 345.3 16.7 305 488-831 2-383 (417)
139 2al1_A Enolase 1, 2-phospho-D- 100.0 8.4E-35 2.9E-39 330.5 21.3 290 525-832 16-394 (436)
140 2akz_A Gamma enolase, neural; 100.0 4.6E-35 1.6E-39 332.9 17.0 302 495-832 2-391 (439)
141 3qtp_A Enolase 1; glycolysis, 99.9 4.3E-21 1.5E-25 212.3 21.7 301 492-831 5-400 (441)
142 3otr_A Enolase; structural gen 99.8 2.5E-19 8.6E-24 198.1 20.4 304 494-830 3-402 (452)
143 3cf4_G Acetyl-COA decarboxylas 99.7 9.5E-17 3.2E-21 159.7 12.8 137 71-222 19-166 (170)
144 2c42_A Pyruvate-ferredoxin oxi 99.7 6.4E-17 2.2E-21 204.9 14.0 180 256-453 814-1071(1231)
145 1w85_A Pyruvate dehydrogenase 99.6 2.3E-15 7.8E-20 167.6 14.2 151 316-485 137-340 (368)
146 1umd_A E1-alpha, 2-OXO acid de 99.6 2.6E-15 8.8E-20 168.0 13.4 149 318-485 141-341 (367)
147 1ytl_A Acetyl-COA decarboxylas 99.6 3.2E-16 1.1E-20 154.3 5.2 109 75-192 23-142 (174)
148 1qs0_A 2-oxoisovalerate dehydr 99.6 8.3E-15 2.8E-19 164.7 15.6 145 317-479 177-373 (407)
149 2bfd_A 2-oxoisovalerate dehydr 99.6 1.5E-14 5.2E-19 162.8 14.7 117 317-452 158-287 (400)
150 2ozl_A PDHE1-A type I, pyruvat 99.5 5E-14 1.7E-18 156.2 14.6 148 317-485 136-336 (365)
151 2o1x_A 1-deoxy-D-xylulose-5-ph 99.5 3.9E-14 1.3E-18 170.1 12.4 193 256-454 56-291 (629)
152 3l84_A Transketolase; TKT, str 99.5 1.1E-13 3.6E-18 164.4 11.0 117 317-452 110-242 (632)
153 3uk1_A Transketolase; structur 99.4 1.7E-13 5.7E-18 164.3 11.0 118 318-454 152-289 (711)
154 3kom_A Transketolase; rossmann 99.4 2.1E-13 7.1E-18 163.0 10.6 117 318-453 113-250 (663)
155 2e6k_A Transketolase; structur 99.4 2.7E-13 9.2E-18 162.9 11.3 117 317-452 114-250 (651)
156 3m49_A Transketolase; alpha-be 99.4 3.2E-13 1.1E-17 161.6 11.8 117 318-453 137-274 (690)
157 3mos_A Transketolase, TK; thia 99.4 2.8E-13 9.6E-18 161.3 10.6 115 318-452 118-242 (616)
158 2o1s_A 1-deoxy-D-xylulose-5-ph 99.4 1.1E-12 3.7E-17 157.5 15.5 191 256-452 54-284 (621)
159 1itz_A Transketolase; calvin c 99.4 4.3E-13 1.5E-17 161.7 11.0 118 317-453 123-262 (675)
160 2r8o_A Transketolase 1, TK 1; 99.4 4.1E-13 1.4E-17 161.8 10.5 120 316-454 109-249 (669)
161 1gpu_A Transketolase; transfer 99.4 6.1E-13 2.1E-17 160.5 10.8 117 317-452 112-250 (680)
162 1r9j_A Transketolase; domains, 99.3 5E-12 1.7E-16 152.1 11.4 117 317-452 112-250 (673)
163 3rim_A Transketolase, TK; TPP, 99.0 1E-09 3.4E-14 131.3 11.3 116 318-452 130-269 (700)
164 2yic_A 2-oxoglutarate decarbox 99.0 1.1E-09 3.9E-14 133.5 11.7 118 316-452 240-384 (868)
165 2xt6_A 2-oxoglutarate decarbox 98.8 6E-09 2E-13 130.6 11.3 117 317-452 486-629 (1113)
166 1ehy_A Protein (soluble epoxid 98.8 3.9E-09 1.3E-13 114.9 7.8 44 938-981 29-72 (294)
167 2wj6_A 1H-3-hydroxy-4-oxoquina 98.8 4.7E-09 1.6E-13 113.2 8.4 44 938-981 27-70 (276)
168 3afi_E Haloalkane dehalogenase 98.7 9.4E-09 3.2E-13 113.2 6.2 54 925-981 19-72 (316)
169 2yys_A Proline iminopeptidase- 98.7 3.3E-08 1.1E-12 107.0 9.2 52 926-980 16-68 (286)
170 3qyj_A ALR0039 protein; alpha/ 98.7 2E-08 6.7E-13 109.2 7.1 65 909-982 5-69 (291)
171 3om8_A Probable hydrolase; str 98.7 2.9E-08 1E-12 106.2 8.3 54 926-982 18-71 (266)
172 1b6g_A Haloalkane dehalogenase 98.7 8.6E-09 2.9E-13 113.2 4.1 44 938-981 47-91 (310)
173 2xmz_A Hydrolase, alpha/beta h 98.6 1.7E-08 5.8E-13 108.0 5.7 55 922-981 5-59 (269)
174 2xt0_A Haloalkane dehalogenase 98.6 1.7E-08 5.8E-13 110.1 4.8 44 938-981 46-90 (297)
175 3bf7_A Esterase YBFF; thioeste 98.6 2.4E-08 8.2E-13 106.0 5.3 44 938-981 16-59 (255)
176 3c5v_A PME-1, protein phosphat 98.6 1E-07 3.5E-12 104.7 10.1 44 938-981 38-83 (316)
177 3v48_A Aminohydrolase, putativ 98.6 3.4E-08 1.2E-12 105.8 6.0 44 938-981 15-58 (268)
178 2jgd_A 2-oxoglutarate dehydrog 98.6 6.6E-08 2.3E-12 118.8 9.0 116 318-452 318-456 (933)
179 2cjp_A Epoxide hydrolase; HET: 98.6 8.6E-08 2.9E-12 105.7 8.5 51 926-981 24-75 (328)
180 1q0r_A RDMC, aclacinomycin met 98.6 6.4E-08 2.2E-12 105.2 7.4 52 926-980 14-67 (298)
181 1zoi_A Esterase; alpha/beta hy 98.6 7.3E-08 2.5E-12 103.4 7.7 54 925-981 12-66 (276)
182 2psd_A Renilla-luciferin 2-mon 98.6 3.7E-08 1.3E-12 108.5 5.4 64 911-981 23-86 (318)
183 2qtc_A Pyruvate dehydrogenase 98.5 1.6E-07 5.4E-12 115.1 11.1 119 318-453 189-393 (886)
184 2xua_A PCAD, 3-oxoadipate ENOL 98.5 9.4E-08 3.2E-12 102.1 8.0 44 938-981 26-69 (266)
185 3fob_A Bromoperoxidase; struct 98.5 5.5E-08 1.9E-12 104.8 6.1 55 923-982 17-72 (281)
186 2puj_A 2-hydroxy-6-OXO-6-pheny 98.5 7.1E-08 2.4E-12 104.3 6.9 54 924-982 24-81 (286)
187 1iup_A META-cleavage product h 98.5 6.2E-08 2.1E-12 104.6 6.3 52 926-982 18-72 (282)
188 3ia2_A Arylesterase; alpha-bet 98.5 1.1E-07 3.6E-12 101.6 8.0 52 925-981 11-63 (271)
189 3bwx_A Alpha/beta hydrolase; Y 98.5 1.5E-07 5.3E-12 101.3 9.2 44 938-981 29-72 (285)
190 1brt_A Bromoperoxidase A2; hal 98.5 1E-07 3.5E-12 102.3 7.6 53 924-981 14-67 (277)
191 1a88_A Chloroperoxidase L; hal 98.5 1.2E-07 4.2E-12 101.4 7.7 54 925-981 11-65 (275)
192 1a8s_A Chloroperoxidase F; hal 98.5 1.2E-07 4E-12 101.4 7.5 52 925-981 11-63 (273)
193 1a8q_A Bromoperoxidase A1; hal 98.5 1.6E-07 5.4E-12 100.5 7.5 52 925-981 11-63 (274)
194 2wue_A 2-hydroxy-6-OXO-6-pheny 98.5 9.8E-08 3.4E-12 103.6 5.3 53 927-982 28-83 (291)
195 1hkh_A Gamma lactamase; hydrol 98.5 1.7E-07 5.9E-12 100.5 7.2 53 924-981 14-67 (279)
196 3ibt_A 1H-3-hydroxy-4-oxoquino 98.4 1.6E-07 5.4E-12 99.4 6.0 51 928-981 14-64 (264)
197 1c4x_A BPHD, protein (2-hydrox 98.4 1.8E-07 6.3E-12 100.8 6.4 45 938-982 28-76 (285)
198 1r3d_A Conserved hypothetical 98.4 2.3E-07 7.8E-12 99.0 6.2 44 938-981 16-60 (264)
199 3kda_A CFTR inhibitory factor 98.4 2.9E-07 9.9E-12 99.4 6.9 64 909-981 10-73 (301)
200 1u2e_A 2-hydroxy-6-ketonona-2, 98.4 4.1E-07 1.4E-11 98.2 7.8 67 911-982 13-84 (289)
201 1j1i_A META cleavage compound 98.4 3.3E-07 1.1E-11 99.6 6.9 61 910-979 17-80 (296)
202 3r40_A Fluoroacetate dehalogen 98.4 3.3E-07 1.1E-11 98.9 6.9 65 909-982 13-77 (306)
203 2ocg_A Valacyclovir hydrolase; 98.4 4.1E-07 1.4E-11 96.1 7.4 64 910-981 3-68 (254)
204 3nwo_A PIP, proline iminopepti 98.3 2.8E-07 9.6E-12 102.0 5.2 67 910-980 29-98 (330)
205 1wom_A RSBQ, sigma factor SIGB 98.3 2E-07 6.9E-12 99.7 3.4 44 938-981 20-63 (271)
206 3oos_A Alpha/beta hydrolase fa 98.3 2.6E-07 8.7E-12 98.1 4.1 64 909-981 3-66 (278)
207 4i19_A Epoxide hydrolase; stru 98.3 9.1E-07 3.1E-11 100.2 8.6 69 909-982 68-146 (388)
208 3g9x_A Haloalkane dehalogenase 98.3 5.6E-07 1.9E-11 96.8 6.5 67 909-982 10-76 (299)
209 3qit_A CURM TE, polyketide syn 98.3 1.2E-06 4E-11 93.1 8.6 67 909-982 4-71 (286)
210 3fsg_A Alpha/beta superfamily 98.3 6.9E-07 2.4E-11 94.5 6.5 60 914-982 6-67 (272)
211 3g02_A Epoxide hydrolase; alph 98.3 1.1E-06 3.8E-11 100.0 8.4 45 938-982 109-160 (408)
212 3r0v_A Alpha/beta hydrolase fo 98.3 1E-06 3.6E-11 92.7 7.6 51 926-981 16-66 (262)
213 2qvb_A Haloalkane dehalogenase 98.2 7.3E-07 2.5E-11 95.8 5.7 62 911-981 10-71 (297)
214 3u1t_A DMMA haloalkane dehalog 98.2 9.4E-07 3.2E-11 95.4 6.2 65 909-982 9-74 (309)
215 1tht_A Thioesterase; 2.10A {Vi 98.2 1.8E-06 6.3E-11 94.3 8.4 44 938-981 35-80 (305)
216 2wtm_A EST1E; hydrolase; 1.60A 98.2 1.9E-06 6.5E-11 90.9 8.1 44 938-981 27-73 (251)
217 4f0j_A Probable hydrolytic enz 98.2 3.4E-06 1.2E-10 91.2 10.1 45 938-982 46-91 (315)
218 1mtz_A Proline iminopeptidase; 98.2 9.9E-07 3.4E-11 95.2 5.6 66 909-981 5-72 (293)
219 1tqh_A Carboxylesterase precur 98.2 1.3E-06 4.6E-11 92.0 6.2 42 938-979 16-58 (247)
220 4g9e_A AHL-lactonase, alpha/be 98.1 1.8E-06 6.1E-11 91.7 6.4 64 910-981 4-68 (279)
221 1mj5_A 1,3,4,6-tetrachloro-1,4 98.1 1.4E-06 4.9E-11 93.9 5.5 51 926-981 22-72 (302)
222 2qmq_A Protein NDRG2, protein 98.1 5.6E-06 1.9E-10 88.8 10.1 54 926-980 24-83 (286)
223 4fbl_A LIPS lipolytic enzyme; 98.1 1.7E-06 5.8E-11 93.3 5.7 42 938-979 51-93 (281)
224 3b12_A Fluoroacetate dehalogen 97.4 3.7E-07 1.3E-11 98.4 0.0 64 909-981 5-68 (304)
225 3l80_A Putative uncharacterize 98.0 3.7E-06 1.3E-10 90.4 6.2 43 938-980 41-85 (292)
226 3pfb_A Cinnamoyl esterase; alp 98.0 8E-06 2.7E-10 86.5 8.6 74 903-981 16-92 (270)
227 2r11_A Carboxylesterase NP; 26 98.0 2.2E-06 7.6E-11 93.2 4.2 44 938-981 67-111 (306)
228 3kxp_A Alpha-(N-acetylaminomet 98.0 6.9E-06 2.4E-10 89.4 8.1 63 910-981 49-111 (314)
229 2e3j_A Epoxide hydrolase EPHB; 98.0 6.9E-06 2.4E-10 91.7 6.6 45 938-982 27-72 (356)
230 3pe6_A Monoglyceride lipase; a 98.0 1.3E-05 4.6E-10 85.7 8.6 44 938-981 42-86 (303)
231 1azw_A Proline iminopeptidase; 97.9 4E-06 1.4E-10 91.3 4.0 52 926-981 25-77 (313)
232 3hss_A Putative bromoperoxidas 97.9 9.3E-06 3.2E-10 87.1 6.9 55 923-982 33-89 (293)
233 3i28_A Epoxide hydrolase 2; ar 97.9 1.3E-05 4.4E-10 94.6 8.6 53 925-982 250-303 (555)
234 3i1i_A Homoserine O-acetyltran 97.9 4.2E-06 1.4E-10 93.4 3.6 57 923-979 27-100 (377)
235 4dnp_A DAD2; alpha/beta hydrol 97.9 4.6E-06 1.6E-10 87.8 3.6 43 938-980 20-62 (269)
236 3qvm_A OLEI00960; structural g 97.9 4.6E-06 1.6E-10 88.4 3.5 44 938-981 28-71 (282)
237 3fla_A RIFR; alpha-beta hydrol 97.9 9.5E-06 3.3E-10 85.7 5.7 44 938-981 20-63 (267)
238 3vdx_A Designed 16NM tetrahedr 97.9 1.1E-05 3.8E-10 93.4 6.3 54 924-982 15-69 (456)
239 3e0x_A Lipase-esterase related 97.8 7E-06 2.4E-10 85.1 3.9 43 938-981 16-58 (245)
240 3qmv_A Thioesterase, REDJ; alp 97.8 7.1E-06 2.4E-10 88.0 4.0 44 938-981 51-94 (280)
241 3hju_A Monoglyceride lipase; a 97.8 2.9E-05 9.9E-10 85.5 9.0 44 938-981 60-104 (342)
242 1wm1_A Proline iminopeptidase; 97.8 7.6E-06 2.6E-10 89.2 4.0 52 926-981 28-80 (317)
243 3p2m_A Possible hydrolase; alp 97.8 2.2E-05 7.6E-10 86.3 7.8 42 938-981 81-122 (330)
244 3hgj_A Chromate reductase; TIM 97.8 8.5E-05 2.9E-09 82.2 12.2 122 657-783 152-317 (349)
245 1imj_A CIB, CCG1-interacting f 97.8 1.8E-05 6.2E-10 80.3 6.4 44 938-981 32-78 (210)
246 1pja_A Palmitoyl-protein thioe 97.8 8.8E-06 3E-10 88.2 3.1 44 938-981 36-82 (302)
247 3dkr_A Esterase D; alpha beta 97.7 3.4E-05 1.2E-09 80.1 6.0 43 938-980 22-65 (251)
248 3llc_A Putative hydrolase; str 97.7 7.6E-05 2.6E-09 78.5 8.5 44 938-981 37-83 (270)
249 3bdi_A Uncharacterized protein 97.7 6E-05 2E-09 76.0 7.3 63 910-978 5-70 (207)
250 3ksr_A Putative serine hydrola 97.6 4.1E-05 1.4E-09 82.1 6.2 44 938-981 28-72 (290)
251 1k8q_A Triacylglycerol lipase, 97.6 3.3E-05 1.1E-09 86.1 5.5 43 938-980 58-107 (377)
252 1z41_A YQJM, probable NADH-dep 97.6 0.00035 1.2E-08 76.9 13.7 122 657-783 144-306 (338)
253 3aty_A Tcoye, prostaglandin F2 97.6 0.00019 6.4E-09 80.0 11.1 121 656-783 173-335 (379)
254 1ufo_A Hypothetical protein TT 97.6 6.6E-05 2.2E-09 77.4 6.8 44 938-981 24-68 (238)
255 3fnb_A Acylaminoacyl peptidase 97.6 7.2E-05 2.5E-09 85.1 7.3 64 914-980 138-203 (405)
256 2dst_A Hypothetical protein TT 97.6 5.4E-05 1.8E-09 71.0 5.1 46 926-982 15-60 (131)
257 2b61_A Homoserine O-acetyltran 97.5 3.6E-05 1.2E-09 86.0 3.9 44 938-981 59-116 (377)
258 2rau_A Putative esterase; NP_3 97.5 5.3E-05 1.8E-09 84.0 5.1 44 938-981 50-110 (354)
259 1qlw_A Esterase; anisotropic r 97.5 7.5E-05 2.6E-09 82.3 6.2 44 938-981 62-113 (328)
260 2q0x_A Protein DUF1749, unchar 97.5 0.00021 7.2E-09 78.9 9.5 43 938-980 38-87 (335)
261 3rm3_A MGLP, thermostable mono 97.5 7.8E-05 2.7E-09 78.8 5.6 42 938-979 40-82 (270)
262 1icp_A OPR1, 12-oxophytodienoa 97.5 0.00022 7.6E-09 79.5 9.5 121 656-783 166-329 (376)
263 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00039 1.3E-08 84.5 12.3 122 657-783 141-309 (671)
264 3lcr_A Tautomycetin biosynthet 97.5 0.00011 3.7E-09 80.7 6.4 44 938-981 81-126 (319)
265 2pl5_A Homoserine O-acetyltran 97.4 5.2E-05 1.8E-09 84.3 3.4 43 938-980 46-107 (366)
266 2vat_A Acetyl-COA--deacetylcep 97.4 5.9E-05 2E-09 86.9 3.9 56 925-980 96-160 (444)
267 3icv_A Lipase B, CALB; circula 97.3 0.00013 4.4E-09 79.0 5.0 42 938-979 65-109 (316)
268 3f67_A Putative dienelactone h 97.3 0.00046 1.6E-08 71.3 9.3 71 909-980 4-75 (241)
269 3l5l_A Xenobiotic reductase A; 97.3 0.00041 1.4E-08 77.1 9.3 122 657-783 158-324 (363)
270 1vyr_A Pentaerythritol tetrani 97.3 0.00062 2.1E-08 75.5 10.7 121 657-783 161-322 (364)
271 2y6u_A Peroxisomal membrane pr 97.2 0.0001 3.5E-09 83.1 2.8 43 938-980 52-102 (398)
272 3kru_A NADH:flavin oxidoreduct 97.2 0.0017 5.9E-08 71.1 12.2 121 657-783 143-306 (343)
273 3ils_A PKS, aflatoxin biosynth 97.2 0.00012 4.2E-09 77.8 2.8 43 938-981 21-63 (265)
274 1kez_A Erythronolide synthase; 97.2 0.00012 4E-09 79.5 2.7 44 938-981 67-112 (300)
275 3fcy_A Xylan esterase 1; alpha 97.2 0.00069 2.4E-08 74.8 8.7 44 938-981 108-151 (346)
276 2i3d_A AGR_C_3351P, hypothetic 97.2 0.00062 2.1E-08 71.2 7.9 44 938-981 47-96 (249)
277 2c7b_A Carboxylesterase, ESTE1 97.1 0.00069 2.4E-08 73.6 8.3 44 938-981 73-121 (311)
278 3trd_A Alpha/beta hydrolase; c 97.1 0.00065 2.2E-08 68.7 7.5 44 938-981 31-80 (208)
279 3ahc_A Phosphoketolase, xylulo 97.1 0.00085 2.9E-08 80.8 8.9 119 320-454 174-322 (845)
280 1l7a_A Cephalosporin C deacety 97.1 0.0016 5.5E-08 70.3 10.6 44 938-981 82-126 (318)
281 1lzl_A Heroin esterase; alpha/ 97.1 0.0013 4.3E-08 72.0 9.5 70 909-981 49-127 (323)
282 4ao6_A Esterase; hydrolase, th 97.1 0.001 3.4E-08 70.4 8.3 69 909-980 29-101 (259)
283 1zi8_A Carboxymethylenebutenol 97.1 0.00042 1.4E-08 71.4 5.2 43 938-980 28-71 (236)
284 2r8b_A AGR_C_4453P, uncharacte 97.0 0.00042 1.4E-08 72.5 5.0 42 938-979 62-105 (251)
285 1jji_A Carboxylesterase; alpha 97.0 0.0011 3.7E-08 72.2 8.1 44 938-981 79-127 (311)
286 2fuk_A XC6422 protein; A/B hyd 97.0 0.0018 6.1E-08 65.9 9.1 44 938-981 37-86 (220)
287 2o2g_A Dienelactone hydrolase; 97.0 0.00065 2.2E-08 69.1 5.7 42 938-979 35-79 (223)
288 2hdw_A Hypothetical protein PA 97.0 0.0018 6.2E-08 71.7 9.6 43 938-980 96-140 (367)
289 1tca_A Lipase; hydrolase(carbo 96.9 0.0006 2.1E-08 74.5 5.5 42 938-979 31-75 (317)
290 1jfr_A Lipase; serine hydrolas 96.9 0.00071 2.4E-08 71.3 5.9 42 938-979 54-96 (262)
291 2r14_A Morphinone reductase; H 96.9 0.0027 9.1E-08 70.7 10.7 121 657-783 166-327 (377)
292 1w52_X Pancreatic lipase relat 96.9 0.00032 1.1E-08 80.5 3.2 42 938-979 70-115 (452)
293 3bxp_A Putative lipase/esteras 96.9 0.0019 6.4E-08 68.5 9.0 42 938-979 35-80 (277)
294 3vis_A Esterase; alpha/beta-hy 96.9 0.001 3.5E-08 72.2 7.0 42 938-979 96-138 (306)
295 1bu8_A Protein (pancreatic lip 96.9 0.00033 1.1E-08 80.5 3.1 42 938-979 70-115 (452)
296 2wir_A Pesta, alpha/beta hydro 96.9 0.0015 5.3E-08 70.8 8.3 44 938-981 76-124 (313)
297 1hpl_A Lipase; hydrolase(carbo 96.9 0.00033 1.1E-08 80.1 2.9 42 938-979 69-114 (449)
298 3gr7_A NADPH dehydrogenase; fl 96.9 0.0053 1.8E-07 67.4 12.3 122 657-783 144-306 (340)
299 3h04_A Uncharacterized protein 96.9 0.0013 4.4E-08 68.9 7.3 42 938-979 29-74 (275)
300 3og9_A Protein YAHD A copper i 96.9 0.00092 3.2E-08 67.8 5.7 41 938-979 17-70 (209)
301 3ain_A 303AA long hypothetical 96.8 0.0027 9.3E-08 69.5 9.6 44 938-981 90-138 (323)
302 3bjr_A Putative carboxylestera 96.8 0.0025 8.5E-08 67.9 8.7 41 938-978 50-94 (283)
303 2h1i_A Carboxylesterase; struc 96.8 0.00064 2.2E-08 69.7 3.6 42 938-979 38-81 (226)
304 2zyr_A Lipase, putative; fatty 96.8 0.00033 1.1E-08 79.9 1.5 41 938-978 22-66 (484)
305 2gou_A Oxidoreductase, FMN-bin 96.7 0.0058 2E-07 67.8 11.0 121 657-783 161-321 (365)
306 3mve_A FRSA, UPF0255 protein V 96.7 0.003 1E-07 71.8 8.9 43 938-980 193-237 (415)
307 3gka_A N-ethylmaleimide reduct 96.7 0.0059 2E-07 67.3 10.7 122 656-783 160-315 (361)
308 2hm7_A Carboxylesterase; alpha 96.6 0.0031 1.1E-07 68.2 8.3 44 938-981 74-122 (310)
309 3tej_A Enterobactin synthase c 96.6 0.00082 2.8E-08 73.9 3.4 42 938-979 101-142 (329)
310 1rp1_A Pancreatic lipase relat 96.6 0.0007 2.4E-08 77.4 2.9 42 938-979 70-115 (450)
311 4ab4_A Xenobiotic reductase B; 96.6 0.0063 2.2E-07 67.0 10.3 121 657-783 153-307 (362)
312 3cn9_A Carboxylesterase; alpha 96.6 0.0023 7.9E-08 65.5 6.4 36 938-973 24-62 (226)
313 1gpl_A RP2 lipase; serine este 96.5 0.00078 2.7E-08 77.0 2.6 42 938-979 70-115 (432)
314 2cb9_A Fengycin synthetase; th 96.4 0.0031 1.1E-07 65.9 5.8 40 938-977 22-61 (244)
315 3b5e_A MLL8374 protein; NP_108 96.3 0.0025 8.6E-08 65.1 4.7 38 938-975 30-67 (223)
316 1jmk_C SRFTE, surfactin synthe 96.3 0.0029 9.9E-08 65.1 5.0 40 938-978 17-56 (230)
317 2hih_A Lipase 46 kDa form; A1 96.2 0.0015 5.3E-08 73.9 2.5 42 938-979 52-106 (431)
318 3h2g_A Esterase; xanthomonas o 96.2 0.0022 7.6E-08 72.4 3.7 44 938-981 79-134 (397)
319 3k2i_A Acyl-coenzyme A thioest 96.1 0.0075 2.6E-07 68.6 7.5 62 914-981 138-200 (422)
320 2jbw_A Dhpon-hydrolase, 2,6-di 96.1 0.0058 2E-07 68.6 6.3 41 938-978 152-193 (386)
321 1vlq_A Acetyl xylan esterase; 96.0 0.0082 2.8E-07 65.7 7.3 42 938-979 95-136 (337)
322 1fj2_A Protein (acyl protein t 96.0 0.0067 2.3E-07 62.0 6.1 33 938-970 23-56 (232)
323 3e4d_A Esterase D; S-formylglu 96.0 0.013 4.3E-07 62.0 8.4 43 938-980 44-90 (278)
324 3hxk_A Sugar hydrolase; alpha- 96.0 0.0089 3E-07 63.1 7.0 43 938-980 43-89 (276)
325 2hsa_B 12-oxophytodienoate red 95.9 0.018 6.1E-07 64.6 9.4 121 657-783 171-347 (402)
326 3ga7_A Acetyl esterase; phosph 95.8 0.022 7.5E-07 62.1 9.5 44 938-981 87-135 (326)
327 2hfk_A Pikromycin, type I poly 95.8 0.0076 2.6E-07 65.7 5.5 39 940-978 91-131 (319)
328 1jkm_A Brefeldin A esterase; s 95.8 0.013 4.3E-07 65.2 7.3 42 938-979 109-156 (361)
329 2pbl_A Putative esterase/lipas 95.7 0.0064 2.2E-07 63.7 4.5 42 938-979 63-108 (262)
330 3d0k_A Putative poly(3-hydroxy 95.7 0.012 3.9E-07 63.5 6.5 36 938-973 54-91 (304)
331 1vkh_A Putative serine hydrola 95.7 0.013 4.6E-07 61.8 6.8 43 938-980 41-93 (273)
332 2x5x_A PHB depolymerase PHAZ7; 95.6 0.0023 7.8E-08 70.4 0.3 44 938-981 40-101 (342)
333 3d59_A Platelet-activating fac 95.5 0.0083 2.8E-07 67.3 4.6 42 938-979 98-140 (383)
334 4h0c_A Phospholipase/carboxyle 95.5 0.0065 2.2E-07 61.9 3.2 41 937-977 21-62 (210)
335 2o7r_A CXE carboxylesterase; a 95.5 0.033 1.1E-06 60.9 9.2 73 909-981 53-133 (338)
336 2fx5_A Lipase; alpha-beta hydr 95.4 0.013 4.6E-07 61.3 5.6 38 938-975 49-87 (258)
337 4e15_A Kynurenine formamidase; 95.3 0.02 6.9E-07 61.5 6.6 42 938-979 82-127 (303)
338 3k6k_A Esterase/lipase; alpha/ 95.3 0.041 1.4E-06 59.8 9.1 44 938-981 79-128 (322)
339 3g8y_A SUSD/RAGB-associated es 95.1 0.028 9.5E-07 63.2 7.4 44 938-981 114-176 (391)
340 3tjm_A Fatty acid synthase; th 95.1 0.021 7.1E-07 61.0 6.0 37 938-976 24-60 (283)
341 3hlk_A Acyl-coenzyme A thioest 95.0 0.041 1.4E-06 63.0 8.4 62 914-981 154-216 (446)
342 3nuz_A Putative acetyl xylan e 94.9 0.05 1.7E-06 61.2 8.8 43 938-980 119-180 (398)
343 3d7r_A Esterase; alpha/beta fo 94.8 0.055 1.9E-06 58.9 8.6 41 938-978 96-141 (326)
344 2zsh_A Probable gibberellin re 94.7 0.089 3E-06 57.8 10.0 44 938-981 113-163 (351)
345 3fak_A Esterase/lipase, ESTE5; 94.7 0.078 2.7E-06 57.6 9.3 44 938-981 80-128 (322)
346 3u0v_A Lysophospholipase-like 94.7 0.03 1E-06 57.4 5.6 38 938-975 23-66 (239)
347 3noy_A 4-hydroxy-3-methylbut-2 94.5 0.048 1.7E-06 58.2 6.5 97 713-815 44-143 (366)
348 2qru_A Uncharacterized protein 94.3 0.062 2.1E-06 56.8 7.2 41 938-978 27-72 (274)
349 3fcx_A FGH, esterase D, S-form 94.3 0.085 2.9E-06 55.5 8.2 41 938-978 45-91 (282)
350 1vhn_A Putative flavin oxidore 94.1 0.071 2.4E-06 57.9 7.3 135 653-797 67-226 (318)
351 3l5a_A NADH/flavin oxidoreduct 93.9 0.28 9.5E-06 55.1 11.7 77 657-733 170-283 (419)
352 3qh4_A Esterase LIPW; structur 93.8 0.12 4.1E-06 56.0 8.3 43 938-980 85-132 (317)
353 3o4h_A Acylamino-acid-releasin 93.5 0.043 1.5E-06 65.0 4.5 41 938-978 360-406 (582)
354 3b0p_A TRNA-dihydrouridine syn 93.5 0.67 2.3E-05 50.8 13.7 125 653-783 66-224 (350)
355 3n2z_B Lysosomal Pro-X carboxy 93.5 0.082 2.8E-06 60.1 6.4 43 938-980 38-85 (446)
356 1f76_A Dihydroorotate dehydrog 93.4 0.39 1.3E-05 52.5 11.7 123 656-784 152-318 (336)
357 3i6y_A Esterase APC40077; lipa 93.4 0.14 4.7E-06 53.9 7.8 42 938-979 47-92 (280)
358 2uz0_A Esterase, tributyrin es 93.2 0.21 7.2E-06 51.7 8.9 43 938-980 41-87 (263)
359 1j8f_A SIRT2, sirtuin 2, isofo 93.0 0.31 1.1E-05 52.6 9.9 79 156-240 216-313 (323)
360 3ls2_A S-formylglutathione hyd 93.0 0.17 5.7E-06 53.3 7.7 41 938-978 45-89 (280)
361 1jub_A Dihydroorotate dehydrog 92.9 0.37 1.3E-05 51.9 10.5 129 653-788 102-275 (311)
362 1o94_A Tmadh, trimethylamine d 92.9 0.47 1.6E-05 57.7 12.5 122 656-783 148-320 (729)
363 3k30_A Histamine dehydrogenase 92.9 0.35 1.2E-05 58.5 11.2 121 657-783 156-323 (690)
364 3bdv_A Uncharacterized protein 92.8 0.062 2.1E-06 53.0 3.8 39 938-978 17-56 (191)
365 2e6f_A Dihydroorotate dehydrog 92.5 0.25 8.4E-06 53.5 8.3 131 645-783 95-272 (314)
366 2z3z_A Dipeptidyl aminopeptida 92.2 0.11 3.6E-06 63.1 5.5 43 938-980 485-535 (706)
367 2ecf_A Dipeptidyl peptidase IV 92.1 0.1 3.5E-06 63.6 5.2 42 938-979 517-567 (741)
368 4ezi_A Uncharacterized protein 92.0 0.71 2.4E-05 51.2 11.4 43 938-980 74-126 (377)
369 1o97_D Electron transferring f 91.9 0.45 1.5E-05 51.3 9.2 116 87-223 201-318 (320)
370 4fhz_A Phospholipase/carboxyle 91.5 0.14 4.8E-06 54.6 4.8 36 938-973 66-104 (285)
371 3azo_A Aminopeptidase; POP fam 91.2 0.18 6.2E-06 60.5 5.9 41 938-978 424-470 (662)
372 1jjf_A Xylanase Z, endo-1,4-be 91.0 0.38 1.3E-05 50.2 7.5 41 938-978 62-114 (268)
373 1z68_A Fibroblast activation p 90.7 0.18 6.2E-06 61.2 5.3 42 938-979 496-543 (719)
374 4b6g_A Putative esterase; hydr 90.0 0.53 1.8E-05 49.5 7.7 39 938-976 51-93 (283)
375 1xfd_A DIP, dipeptidyl aminope 90.0 0.1 3.4E-06 63.5 2.2 41 938-978 496-542 (723)
376 2uz1_A Benzaldehyde lyase; thi 89.2 1.3 4.4E-05 52.1 10.8 105 328-451 53-164 (563)
377 4f21_A Carboxylesterase/phosph 89.1 0.11 3.7E-06 54.2 1.3 55 914-973 18-75 (246)
378 1s2w_A Phosphoenolpyruvate pho 88.9 5.1 0.00017 42.4 14.0 103 654-756 91-215 (295)
379 3i2k_A Cocaine esterase; alpha 88.8 0.54 1.9E-05 55.6 7.2 43 938-980 35-82 (587)
380 1ybh_A Acetolactate synthase, 88.6 1.2 4.1E-05 52.7 10.1 106 328-452 62-173 (590)
381 1ozh_A ALS, acetolactate synth 88.5 1.3 4.3E-05 52.2 10.0 105 328-451 60-170 (566)
382 1t9b_A Acetolactate synthase, 88.3 1.3 4.4E-05 53.2 10.0 105 328-451 132-242 (677)
383 1yr2_A Prolyl oligopeptidase; 87.9 0.39 1.3E-05 58.6 5.4 41 938-978 488-531 (741)
384 2iht_A Carboxyethylarginine sy 87.7 1.7 5.7E-05 51.2 10.5 107 328-452 60-172 (573)
385 4a5s_A Dipeptidyl peptidase 4 87.7 0.77 2.6E-05 56.0 7.9 42 938-979 502-549 (740)
386 3glr_A NAD-dependent deacetyla 87.7 0.5 1.7E-05 49.9 5.2 78 157-240 194-274 (285)
387 4e38_A Keto-hydroxyglutarate-a 87.6 5.3 0.00018 40.6 12.6 138 653-812 42-181 (232)
388 1s5p_A NAD-dependent deacetyla 87.1 0.28 9.5E-06 50.5 2.8 64 157-222 164-229 (235)
389 1wa3_A 2-keto-3-deoxy-6-phosph 86.8 3.4 0.00012 41.2 10.8 141 653-814 18-159 (205)
390 1r88_A MPT51/MPB51 antigen; AL 86.8 1.8 6.1E-05 45.5 9.2 38 938-975 34-77 (280)
391 2px6_A Thioesterase domain; th 86.8 0.42 1.4E-05 51.5 4.2 35 938-974 46-80 (316)
392 1q1a_A HST2 protein; ternary c 86.3 0.78 2.7E-05 48.7 5.9 67 157-223 208-277 (289)
393 2pan_A Glyoxylate carboligase; 86.2 2.6 8.9E-05 50.0 11.1 105 328-451 77-188 (616)
394 3ih1_A Methylisocitrate lyase; 86.2 1.4 4.9E-05 46.7 7.8 100 654-755 101-216 (305)
395 3oix_A Putative dihydroorotate 86.1 3.5 0.00012 44.8 10.9 139 646-792 131-313 (345)
396 4ef8_A Dihydroorotate dehydrog 85.9 3.2 0.00011 45.2 10.5 132 645-784 128-306 (354)
397 3ebl_A Gibberellin receptor GI 85.5 2.3 7.7E-05 46.8 9.4 42 938-979 112-160 (365)
398 2xdw_A Prolyl endopeptidase; a 85.3 1.2 3.9E-05 54.1 7.5 41 938-978 466-510 (710)
399 1mpx_A Alpha-amino acid ester 85.2 1 3.4E-05 53.7 6.7 43 938-980 51-105 (615)
400 1dqz_A 85C, protein (antigen 8 84.9 2 6.7E-05 45.1 8.3 37 939-975 30-72 (280)
401 1efp_A ETF, protein (electron 84.7 1.2 4E-05 47.7 6.3 111 89-222 193-306 (307)
402 1v5e_A Pyruvate oxidase; oxido 84.5 2.3 8E-05 50.1 9.5 105 328-452 55-165 (590)
403 2nxw_A Phenyl-3-pyruvate decar 84.5 2.9 0.0001 49.0 10.3 111 328-452 71-187 (565)
404 2hjh_A NAD-dependent histone d 84.2 0.88 3E-05 49.8 5.2 65 157-224 252-317 (354)
405 1efv_A Electron transfer flavo 83.9 1.7 5.7E-05 46.7 7.1 113 89-224 198-313 (315)
406 2hjp_A Phosphonopyruvate hydro 83.7 17 0.00058 38.2 14.6 124 654-782 87-233 (290)
407 1yc5_A NAD-dependent deacetyla 83.6 0.44 1.5E-05 49.4 2.3 66 156-223 176-243 (246)
408 3eya_A Pyruvate dehydrogenase 83.4 3 0.0001 48.7 9.7 105 328-451 53-162 (549)
409 1xg4_A Probable methylisocitra 83.3 5.5 0.00019 42.1 10.7 100 655-755 92-208 (295)
410 3riy_A NAD-dependent deacetyla 83.1 0.64 2.2E-05 48.9 3.4 63 156-220 208-272 (273)
411 4iao_A NAD-dependent histone d 82.9 1.6 5.4E-05 49.1 6.5 65 157-224 390-455 (492)
412 2xe4_A Oligopeptidase B; hydro 82.9 0.75 2.6E-05 56.2 4.4 42 938-979 509-553 (751)
413 3eoo_A Methylisocitrate lyase; 82.8 3.4 0.00012 43.7 8.8 102 654-756 95-213 (298)
414 3k35_A NAD-dependent deacetyla 82.8 0.81 2.8E-05 48.8 4.0 65 157-223 203-269 (318)
415 1pno_A NAD(P) transhydrogenase 82.8 0.75 2.6E-05 43.2 3.2 140 75-223 12-179 (180)
416 1sfr_A Antigen 85-A; alpha/bet 82.7 3.2 0.00011 44.1 9.0 38 938-975 34-77 (304)
417 2x7j_A 2-succinyl-5-enolpyruvy 82.6 1.9 6.4E-05 51.1 7.6 106 328-452 81-199 (604)
418 1ma3_A SIR2-AF2, transcription 82.4 0.57 1.9E-05 48.7 2.6 65 156-222 179-245 (253)
419 2q28_A Oxalyl-COA decarboxylas 82.4 2.9 9.9E-05 49.0 9.1 107 328-451 57-169 (564)
420 3lye_A Oxaloacetate acetyl hyd 82.4 4.4 0.00015 43.0 9.4 111 644-755 89-220 (307)
421 3fa4_A 2,3-dimethylmalate lyas 82.4 5.9 0.0002 41.9 10.4 101 654-755 92-212 (302)
422 1yd7_A 2-keto acid:ferredoxin 82.4 2.1 7.2E-05 47.6 7.4 104 328-449 76-186 (395)
423 2bkl_A Prolyl endopeptidase; m 82.3 1.3 4.6E-05 53.4 6.3 42 938-979 446-490 (695)
424 2fsv_C NAD(P) transhydrogenase 82.2 0.81 2.8E-05 44.0 3.3 140 74-223 34-202 (203)
425 1q6z_A BFD, BFDC, benzoylforma 82.2 2 6.8E-05 50.0 7.5 106 328-452 50-162 (528)
426 2wvg_A PDC, pyruvate decarboxy 82.1 4.6 0.00016 47.3 10.7 113 328-452 53-170 (568)
427 2vbi_A Pyruvate decarboxylase; 81.8 4 0.00014 47.8 10.0 113 328-452 53-170 (566)
428 2ze3_A DFA0005; organic waste 81.5 17 0.00059 37.8 13.6 102 654-756 89-210 (275)
429 1d4o_A NADP(H) transhydrogenas 81.3 0.83 2.8E-05 43.0 3.0 139 75-223 11-178 (184)
430 4feg_A Pyruvate oxidase; carba 81.1 2.8 9.6E-05 49.6 8.4 106 328-452 62-172 (603)
431 1djl_A Transhydrogenase DIII; 81.1 0.85 2.9E-05 44.0 3.0 139 75-223 34-201 (207)
432 3lab_A Putative KDPG (2-keto-3 80.9 8.2 0.00028 38.6 10.3 140 652-812 20-166 (217)
433 1m2k_A Silent information regu 80.7 0.87 3E-05 47.2 3.3 64 157-222 174-239 (249)
434 2c31_A Oxalyl-COA decarboxylas 80.5 3.2 0.00011 48.7 8.5 107 328-451 59-171 (568)
435 2pgn_A Cyclohexane-1,2-dione h 80.4 3.9 0.00013 48.2 9.2 105 328-451 55-165 (589)
436 1ep3_A Dihydroorotate dehydrog 80.2 3.1 0.0001 44.6 7.6 124 654-786 108-272 (311)
437 3pki_A NAD-dependent deacetyla 80.2 0.86 2.9E-05 49.1 3.1 65 157-223 203-269 (355)
438 1q14_A HST2 protein; histone d 80.0 1.8 6E-05 47.3 5.5 67 157-223 216-285 (361)
439 1mzh_A Deoxyribose-phosphate a 79.9 4.8 0.00016 40.9 8.5 138 655-807 68-219 (225)
440 3hww_A 2-succinyl-5-enolpyruvy 79.8 2.8 9.6E-05 49.0 7.7 105 328-451 58-171 (556)
441 3b8i_A PA4872 oxaloacetate dec 79.7 15 0.0005 38.6 12.3 100 654-755 94-209 (287)
442 1jvn_A Glutamine, bifunctional 78.2 1.7 5.8E-05 50.7 5.1 141 659-808 349-550 (555)
443 4djd_D C/Fe-SP, corrinoid/iron 78.0 8.7 0.0003 41.0 10.0 149 658-812 81-253 (323)
444 3lab_A Putative KDPG (2-keto-3 77.8 1.1 3.7E-05 45.1 2.7 95 711-817 21-124 (217)
445 2v82_A 2-dehydro-3-deoxy-6-pho 77.0 11 0.00036 37.7 10.1 149 644-814 7-157 (212)
446 3lq1_A 2-succinyl-5-enolpyruvy 77.0 3.3 0.00011 48.7 7.2 105 328-451 61-178 (578)
447 2bru_C NAD(P) transhydrogenase 76.8 1 3.5E-05 42.4 2.1 138 75-222 19-185 (186)
448 1ik6_A Pyruvate dehydrogenase; 76.6 5.8 0.0002 43.5 8.5 101 328-448 110-219 (369)
449 3tjl_A NADPH dehydrogenase; OL 76.5 13 0.00044 41.2 11.2 75 659-733 170-284 (407)
450 2vk8_A Pyruvate decarboxylase 76.4 6.8 0.00023 45.8 9.7 112 328-452 54-171 (563)
451 1vhc_A Putative KHG/KDPG aldol 76.0 34 0.0012 34.5 13.4 139 653-813 25-165 (224)
452 1rvg_A Fructose-1,6-bisphospha 75.5 19 0.00066 37.9 11.7 111 644-759 73-211 (305)
453 3u31_A SIR2A, transcriptional 75.5 2.5 8.5E-05 44.7 4.9 61 157-218 213-275 (290)
454 3iuj_A Prolyl endopeptidase; h 75.3 3.7 0.00013 49.4 7.2 41 938-978 454-497 (693)
455 1ovm_A Indole-3-pyruvate decar 75.2 6.3 0.00022 45.9 9.0 112 328-451 55-170 (552)
456 1zlp_A PSR132, petal death pro 75.2 11 0.00039 40.1 9.9 112 643-755 101-230 (318)
457 3iii_A COCE/NOND family hydrol 74.2 2.7 9.3E-05 49.1 5.4 43 938-980 67-133 (560)
458 1y0e_A Putative N-acetylmannos 74.0 8.9 0.00031 38.6 8.7 109 662-783 80-203 (223)
459 4e38_A Keto-hydroxyglutarate-a 73.3 2 6.8E-05 43.7 3.4 90 712-814 43-136 (232)
460 1mxs_A KDPG aldolase; 2-keto-3 73.0 27 0.00091 35.2 11.8 138 654-813 35-174 (225)
461 3q94_A Fructose-bisphosphate a 72.8 14 0.00049 38.6 9.9 134 643-786 80-238 (288)
462 1gvf_A Tagatose-bisphosphate a 72.6 24 0.00083 36.9 11.6 121 661-787 88-235 (286)
463 1yxy_A Putative N-acetylmannos 71.9 23 0.00079 35.7 11.3 110 661-784 92-215 (234)
464 2ozl_B PDHE1-B, pyruvate dehyd 71.8 7.3 0.00025 42.3 7.7 102 328-449 74-184 (341)
465 2h9a_B CO dehydrogenase/acetyl 71.3 9.3 0.00032 40.6 8.1 148 657-812 74-246 (310)
466 1gkl_A Endo-1,4-beta-xylanase 70.7 5.7 0.0002 42.1 6.5 37 938-974 69-117 (297)
467 1vrd_A Inosine-5'-monophosphat 70.7 6.7 0.00023 45.0 7.5 113 658-783 237-368 (494)
468 2h9a_A Carbon monoxide dehydro 70.3 79 0.0027 35.2 15.8 138 653-803 101-249 (445)
469 1wbh_A KHG/KDPG aldolase; lyas 70.2 41 0.0014 33.5 12.3 138 653-812 24-163 (214)
470 1tv5_A Dhodehase, dihydroorota 70.0 29 0.00098 38.9 12.2 125 656-786 196-404 (443)
471 1h5y_A HISF; histidine biosynt 69.8 3.8 0.00013 42.1 4.8 132 663-807 92-250 (253)
472 1thf_D HISF protein; thermophI 69.7 2.9 9.9E-05 43.2 3.8 136 663-808 89-248 (253)
473 3i4e_A Isocitrate lyase; struc 69.0 36 0.0012 37.6 12.3 107 643-749 152-306 (439)
474 3i9v_3 NADH-quinone oxidoreduc 69.0 13 0.00043 45.4 9.8 84 70-174 320-405 (783)
475 3q58_A N-acetylmannosamine-6-p 68.8 32 0.0011 34.7 11.3 107 661-783 92-209 (229)
476 2yw3_A 4-hydroxy-2-oxoglutarat 68.8 30 0.001 34.3 11.0 136 654-813 22-159 (207)
477 2qiw_A PEP phosphonomutase; st 68.0 37 0.0013 34.9 11.7 95 660-755 96-209 (255)
478 2b9v_A Alpha-amino acid ester 67.9 4.9 0.00017 48.0 5.7 43 938-980 63-118 (652)
479 1w8s_A FBP aldolase, fructose- 67.4 19 0.00065 37.3 9.5 119 661-781 96-228 (263)
480 3lg3_A Isocitrate lyase; conse 67.2 40 0.0014 37.2 12.1 106 644-749 153-306 (435)
481 3m5v_A DHDPS, dihydrodipicolin 66.9 95 0.0032 32.7 15.1 152 654-812 25-194 (301)
482 2isw_A Putative fructose-1,6-b 66.8 37 0.0013 36.1 11.5 109 644-759 76-213 (323)
483 1jcn_A Inosine monophosphate d 66.4 9.7 0.00033 43.9 7.7 114 659-786 256-389 (514)
484 2nap_A Protein (periplasmic ni 65.9 43 0.0015 40.2 13.7 119 70-198 79-210 (723)
485 1ka9_F Imidazole glycerol phos 65.8 3.1 0.00011 42.9 3.1 138 662-808 89-249 (252)
486 2iv2_X Formate dehydrogenase H 65.7 35 0.0012 41.0 12.8 117 70-196 78-206 (715)
487 3noy_A 4-hydroxy-3-methylbut-2 65.3 49 0.0017 35.4 12.0 156 653-829 42-202 (366)
488 2vbf_A Branched-chain alpha-ke 64.7 14 0.00047 43.3 8.7 111 328-451 75-190 (570)
489 3d0c_A Dihydrodipicolinate syn 64.4 91 0.0031 33.0 14.4 151 654-811 30-194 (314)
490 1ydn_A Hydroxymethylglutaryl-C 64.2 7.8 0.00027 41.1 5.9 92 711-809 22-137 (295)
491 3dz1_A Dihydrodipicolinate syn 64.2 1.3E+02 0.0044 31.8 15.5 154 654-812 26-200 (313)
492 2o1s_A 1-deoxy-D-xylulose-5-ph 64.1 12 0.00043 44.1 8.2 100 328-448 373-476 (621)
493 4a3u_A NCR, NADH\:flavin oxido 64.0 13 0.00046 40.5 7.8 77 657-733 152-259 (358)
494 3qfe_A Putative dihydrodipicol 63.8 60 0.0021 34.5 12.8 154 655-811 30-201 (318)
495 3e96_A Dihydrodipicolinate syn 63.6 56 0.0019 34.7 12.6 151 654-811 30-194 (316)
496 1wv2_A Thiazole moeity, thiazo 63.5 48 0.0017 33.9 11.1 122 652-784 82-216 (265)
497 3doh_A Esterase; alpha-beta hy 62.9 12 0.0004 41.1 7.3 41 938-978 174-227 (380)
498 3c2q_A Uncharacterized conserv 62.5 2.5 8.6E-05 44.2 1.5 101 109-223 234-338 (345)
499 2l69_A Rossmann 2X3 fold prote 62.2 33 0.0011 28.5 7.8 45 409-453 17-61 (134)
500 3igs_A N-acetylmannosamine-6-p 61.9 29 0.001 35.1 9.5 107 661-783 92-209 (232)
No 1
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=9.1e-63 Score=558.49 Aligned_cols=362 Identities=18% Similarity=0.224 Sum_probs=312.8
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HH
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LL 565 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~ 565 (983)
|++|||++|+++.+++||+.||.++.+.+ ..++.++|||+|++|++||||+.+. + +++++.+.+...++. +.
T Consensus 3 m~~MkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~ 78 (383)
T 3i4k_A 3 LSDLTIQKVESRILDVPLIRPHGFATTTS----TEQHILLVSVHLENGVIGYGEGVVPGGPWWGGESVETMKALVDGYLA 78 (383)
T ss_dssp --CCBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEECCSSSTTTTSCCHHHHHHHHHHTTH
T ss_pred CCCCEEEEEEEEEEeccccCCeEecceEE----EeeeEEEEEEEECCCCEEEEecccCCCCccCCCCHHHHHHHHHhhhh
Confidence 66799999999999999999999998764 4589999999999999999999876 2 556777777777754 89
Q ss_pred hHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeE
Q 041113 566 HFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIK 645 (983)
Q Consensus 566 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~ 645 (983)
|.++|+++.+++.++.. +++.+. ..++|++|||+|||||+||.+|+|||+||||.. +++|+
T Consensus 79 p~l~G~d~~~~~~~~~~-----l~~~~~-----~~~~A~said~ALwDl~gk~~g~Pv~~LLGg~~---------r~~v~ 139 (383)
T 3i4k_A 79 PVLIGRAVSELAGIMAD-----LERVVA-----RARYAKAAVDVAMHDAWARSLNVPVRDLLGGTV---------RDKVD 139 (383)
T ss_dssp HHHTTSBGGGHHHHHHH-----HHHHCC-----SCHHHHHHHHHHHHHHHHHHTTSBGGGGTTCCS---------CSEEE
T ss_pred HHHcCCCccCHHHHHHH-----HHHHhc-----CCHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC---------CCeEE
Confidence 99999999887665532 122111 257899999999999999999999999999976 57899
Q ss_pred EEEeecCCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc
Q 041113 646 ICALIDSNKSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI 724 (983)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l 724 (983)
+|+++. ..+++++++++++++++ ||++||+|+|. .++++|++++++||+++|+++.|++|+|++|+.++|+++++.|
T Consensus 140 ~~~t~~-~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~-~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l 217 (383)
T 3i4k_A 140 VTWALG-VLPLDVAVAEIEERIEEFGNRSFKLKMGA-GDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPIL 217 (383)
T ss_dssp BCEEEC-SCCHHHHHHHHHHHHHHHCCSEEEEECCS-SCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHH
T ss_pred EeEEee-CCCHHHHHHHHHHHHHhcCCcEEEEeeCC-CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 998874 56899999999999987 99999999997 3799999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 725 KDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 725 ~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++++|++++||++++++++++|
T Consensus 218 ~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A 292 (383)
T 3i4k_A 218 AEAGVELFEQPTPADDLETLREITRRTNVSVMADESVWTPAE-----ALAVVKAQAADVIALKTTKHGGLLESKKIAAIA 292 (383)
T ss_dssp HHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHH-----HHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHH
T ss_pred HhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHH-----HHHHHHcCCCCEEEEcccccCCHHHHHHHHHHH
Confidence 9999999999998 688899999999999999999998753 5566654 5799999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRG 877 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~p 877 (983)
+++|++++++|++|++|++++++|+++++||+. .++.+++..++.+|++.+|+.+++ +|++|
T Consensus 293 ~~~gi~~~~~~~~es~i~~aa~~hlaaa~p~~~--------------~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~P 358 (383)
T 3i4k_A 293 EAGGLACHGATSLEGPIGTAASLQFAASTKAIS--------------YGTELFGPQLLKDTYIVQEFEYKDGQVAIPQGP 358 (383)
T ss_dssp HHTTCEEEECCSCCCHHHHHHHHHHHHHCTTEE--------------EEECCCHHHHBSSCSSSSCCCEETTEEECCCSS
T ss_pred HHcCCeEEeCCCCccHHHHHHHHHHHHcCCCCC--------------ccccccchhhhhhhccCCCceeeCCEEECCCCC
Confidence 999999999999999999999999999998641 112344566788899999999884 99999
Q ss_pred eeeEEecchhhhhhhccccc
Q 041113 878 FVEASVAKATHILQNLQINN 897 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~~~ 897 (983)
||||++| ++.++++++..
T Consensus 359 GlGv~~d--~~~l~~~~~~~ 376 (383)
T 3i4k_A 359 GLGVDVD--MDKVNFYTRKE 376 (383)
T ss_dssp BTSCCCC--HHHHHHHBC--
T ss_pred CcceeeC--HHHHHHhhhcc
Confidence 9999999 88888887654
No 2
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=6.6e-63 Score=558.83 Aligned_cols=361 Identities=17% Similarity=0.192 Sum_probs=308.8
Q ss_pred cccee--EeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-
Q 041113 490 LSICK--ICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF- 563 (983)
Q Consensus 490 ~~~mk--I~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~- 563 (983)
|++|| |++|+++.+++||+.||.++.+++ ..++.++|||+|++|++||||+.+.+ |..++...+...++.
T Consensus 1 m~~m~~~I~~i~~~~~~~Pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~y~~e~~~~~~~~i~~~ 76 (382)
T 3dgb_A 1 MSLHASAIESIETIIVDLPTIRPHKLAMHTM----QNQTLVLIRLRCADGIEGLGESTTIGGLAYGNESPDSIKTNIDRF 76 (382)
T ss_dssp ---CTTBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEEECSTTTTSSSCCHHHHHHHHHHT
T ss_pred CChhhCeeeEEEEEEEeeccCCCeEecCeEE----eeeeEEEEEEEECCCCEEEEecccCCCCccCCCCHHHHHHHHHHH
Confidence 55566 999999999999999999998764 45899999999999999999998763 445777777777764
Q ss_pred HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce
Q 041113 564 LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS 643 (983)
Q Consensus 564 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~ 643 (983)
+.|.++|+++.+++.++.. +++.+ ..+++|++|||+|||||+||.+|+|||+||||.. +++
T Consensus 77 l~p~liG~d~~~~~~~~~~-----l~~~~-----~g~~~A~said~ALwDl~gk~~g~Pv~~LLGg~~---------r~~ 137 (382)
T 3dgb_A 77 VAPLLIGQDASNINAAMLR-----LEQSI-----RGNTFAKSGIESALLDAQGKRLGLPVSELLGGRV---------RDA 137 (382)
T ss_dssp HHHHHTTSBTTCHHHHHHH-----HHHHC-----CSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSE
T ss_pred HHHHhcCCCccCHHHHHHH-----HHHHh-----cCchHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC---------CCe
Confidence 8999999999887665532 22221 1247899999999999999999999999999986 578
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHh
Q 041113 644 IKICALIDSNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGF 722 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~ 722 (983)
||+|+++. ..+++++.++++++++ .||++||+|+|. .++++|+++|++||+++|+++.|++|+|++|++++|+++++
T Consensus 138 v~~~~t~~-~~~~~~~~~~~~~~~~~~G~~~~KiKvg~-~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~ 215 (382)
T 3dgb_A 138 LPVAWTLA-SGDTAKDIAEAQKMLDLRRHRIFKLKIGA-GEVDRDLAHVIAIKKALGDSASVRVDVNQAWDEAVALRACR 215 (382)
T ss_dssp EEBCEEEC-SSCHHHHHHHHHHHHHTTSCSEEEEECCS-SCHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHH
T ss_pred eeEEEEec-CCChHHHHHHHHHHHHhCCCCEEEEeeCC-CCHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHH
Confidence 99998874 4578888888888887 699999999997 36899999999999999999999999999999999999999
Q ss_pred hcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHH
Q 041113 723 LIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIAR 799 (983)
Q Consensus 723 ~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~ 799 (983)
.|+++++.|||||++ +++++++|++++++||++||++++..+ +..+++ .++|++|+|++++||+++++++++
T Consensus 216 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~ 290 (382)
T 3dgb_A 216 ILGGNGIDLIEQPISRNNRAGMVRLNASSPAPIMADESIECVED-----AFNLAREGAASVFALKIAKNGGPRATLRTAA 290 (382)
T ss_dssp HHHTTTCCCEECCBCTTCHHHHHHHHHHCSSCEEESTTCSSHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHhhcCcCeeeCCCCccCHHHHHHHHHhCCCCEEeCCCcCCHHH-----HHHHHHcCCCCEEEecccccCCHHHHHHHHH
Confidence 999999999999998 789999999999999999999999753 555555 457999999999999999999999
Q ss_pred HHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCC
Q 041113 800 WAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSC 875 (983)
Q Consensus 800 ~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~ 875 (983)
+|+++|++++++|++|++|++++++||+++++|.. ..+.+....++.+|++.+|+.+++ +|+
T Consensus 291 ~A~~~gi~~~~~~~~es~ig~aa~~hlaaa~~~~~--------------~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~ 356 (382)
T 3dgb_A 291 IAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLS--------------WDTELFGPLLLTEDILAEPPVYRDFHLHVSK 356 (382)
T ss_dssp HHHHHTCEEEECCSCCCHHHHHHHHHHHTTSSCCT--------------TCBCCCHHHHBSCCSBSSCCEEETTEEECCC
T ss_pred HHHHcCCeEeecCCCccHHHHHHHHHHHHcCCCCc--------------ceeeccchhhhhhcccCCCceeECCEEECCC
Confidence 99999999999999999999999999999998641 112234456778899889999884 999
Q ss_pred CCeeeEEecchhhhhhhcccc
Q 041113 876 RGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 876 ~pGlGv~~d~a~~~~~~~~~~ 896 (983)
+|||||++| ++.++++.+.
T Consensus 357 ~PGlGv~~d--~~~l~~~~~~ 375 (382)
T 3dgb_A 357 APGLGLSLD--EERLAFFRRE 375 (382)
T ss_dssp CSBTSCCBC--HHHHHHHBC-
T ss_pred CCCcCcccC--HHHHHHhhhc
Confidence 999999999 8888887754
No 3
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=3.2e-62 Score=550.76 Aligned_cols=348 Identities=22% Similarity=0.288 Sum_probs=305.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHH-HHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
|||++|+++.+++||+.||.++.++. ..++.++|+|+|++|++||||+.+.+ +++++...+...++. +.|.++|
T Consensus 3 MkI~~i~~~~~~~Pl~~p~~~a~~~~----~~~~~~~V~v~td~G~~G~Ge~~~~~~~~get~~~~~~~i~~~l~p~l~G 78 (379)
T 3r0u_A 3 SKIIDIKTSIIKIPLKRTFITAVRST----NHIDSLAVELTLDNGVKGYGVAPATTAITGDTLQGMQYIIREIFAPVILG 78 (379)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEEECCHHHHCCCHHHHHHHHHHTTHHHHTT
T ss_pred CEEEEEEEEEEEeecCCceEccCceE----EEeEEEEEEEEECCCCEEEEEEECCCCccCCCHHHHHHHHHHHhHHHhcC
Confidence 89999999999999999999998764 45899999999999999999998864 456776666677765 8899999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+ ++.. ...++|++|||+|||||+||.+|+|||+||||.+ ++|++|+++
T Consensus 79 ~d~~~~~~~~~~~-----~~~~-----~~~~~A~said~ALwDl~gK~~g~Pv~~LLGg~r----------~~v~~y~t~ 138 (379)
T 3r0u_A 79 SDLSDYKQTLELA-----FKKV-----MFNSAAKMAIDLAYHDLLAKEQDISVAKLLGAKA----------NSIVTDVSI 138 (379)
T ss_dssp CBGGGHHHHHHHH-----HTTC-----SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCC----------CEEEBCEEE
T ss_pred CCcccHHHHHHHH-----HHhc-----ccchHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CeEEEEEEe
Confidence 9998766555321 1111 2357899999999999999999999999999964 689999987
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc--CC
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD--CD 728 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~--~~ 728 (983)
+..+++++++++++++++||++||+|+|. ++++|+++|++||+++|+++.|++|+|++|++++|+++++.|++ ++
T Consensus 139 -g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~--~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~ 215 (379)
T 3r0u_A 139 -SCGNVAETIQNIQNGVEANFTAIKVKTGA--DFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLN 215 (379)
T ss_dssp -CCCCHHHHHHHHHHHHHTTCCEEEEECSS--CHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCC
T ss_pred -cCCCHHHHHHHHHHHHHcCCCEEeeecCC--CHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCC
Confidence 45789999999999999999999999997 79999999999999999999999999999999999999999999 89
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++++..+ +..+++.+ +|++|+|++++||++++++++++|+++|
T Consensus 216 l~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~g 290 (379)
T 3r0u_A 216 VEIIEQPVKYYDIKAMAEITKFSNIPVVADESVFDAKD-----AERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAG 290 (379)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHH-----HHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTT
T ss_pred cEEEECCCCcccHHHHHHHHhcCCCCEEeCCccCCHHH-----HHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcC
Confidence 999999998 788999999999999999999999753 56666544 7999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCC-CCeee
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSC-RGFVE 880 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~-~pGlG 880 (983)
+++++||++|++|++++++|++++ ||+. .+++++..++.+|++.+++.+++ +|+ +||||
T Consensus 291 i~~~~~~~~es~i~~aa~~hlaaa-p~~~---------------~~eld~~~~~~~d~~~~~~~~~~G~i~~p~~~PGLG 354 (379)
T 3r0u_A 291 ISCMVGCMMESPAGILATASFALA-EDIT---------------VADLDPLDWVAKDLYSDYITFNEPNIILKDNLKGFG 354 (379)
T ss_dssp CEEEECCCSCCHHHHHHHHHHHHH-TTCC---------------CBCCGGGGGSCGGGTTTTEEEETTEEEECTTCSBTS
T ss_pred CEEEEeCCCccHHHHHHHHHHHhC-CCCC---------------eeecCchhhhhhccccCCceEECCEEEcCCCCCccc
Confidence 999999999999999999999999 8641 13466777888999999999874 999 89999
Q ss_pred EEecchhhhh
Q 041113 881 ASVAKATHIL 890 (983)
Q Consensus 881 v~~d~a~~~~ 890 (983)
|++| ++.+
T Consensus 355 veld--~~~~ 362 (379)
T 3r0u_A 355 FNLA--ENLY 362 (379)
T ss_dssp CCCH--HHHT
T ss_pred eeEC--HHHH
Confidence 9999 5553
No 4
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=6e-62 Score=551.40 Aligned_cols=358 Identities=17% Similarity=0.183 Sum_probs=297.7
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+++ ..++.++|||+|++|++||||+.+.+ |..++.+.+...++. +.|.+
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~i~td~G~~G~GE~~~~~~~~y~~e~~~~~~~~i~~~l~p~l 80 (381)
T 3fcp_A 5 ATVEQIESWIVDVPTIRPHKLSMTTM----GCQSLVIVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLL 80 (381)
T ss_dssp CBEEEEEEEEEEECBC---------------CEEEEEEEEEETTSCEEEEEEECSTTTTSSSCCHHHHHHHHHHTHHHHH
T ss_pred cEEEEEEEEEEeccccCCeEecccEE----EeeeEEEEEEEECCCCEEEeccccCCCCccCCCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999999998765 34899999999999999999998763 345677777677764 89999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++.. +++.+ ...++|++|||+|||||+||.+|+|||+||||.. +++||+|+
T Consensus 81 ~G~d~~~~~~~~~~-----l~~~~-----~g~~~A~said~ALwDl~gk~~g~Pv~~LLGg~~---------r~~v~~~~ 141 (381)
T 3fcp_A 81 KGQPADNLNALTAR-----MNGAI-----KGNTFAKSAIETALLDAQGKALGLPVSALLGGAL---------QTALPVLW 141 (381)
T ss_dssp TTSBSSCHHHHHHH-----HHHHC-----CSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSEEEBCE
T ss_pred cCCCcCCHHHHHHH-----HHHHh-----cCcHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCceeeEE
Confidence 99999887665532 22221 1247899999999999999999999999999986 57899998
Q ss_pred eecCCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 649 LIDSNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
++. ..+++++.++++++++ .||++||+|+|. .++++|+++|++||+++|+++.||+|+|++|++++|+++++.|+++
T Consensus 142 t~~-~~~~~~~~~~~~~~~~~~G~~~~KiKvg~-~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 219 (381)
T 3fcp_A 142 TLA-SGDTAKDIAEGEKLLAEGRHRAFKLKIGA-RELATDLRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAM 219 (381)
T ss_dssp EEC-SSCHHHHHHHHHHHTC----CEEEEECCS-SCHHHHHHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHT
T ss_pred Eec-CCChHHHHHHHHHHHHhCCCCEEEEecCC-CChHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhc
Confidence 874 4578888888888887 699999999997 3689999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ |++++++|++++++||++||++++..+ +..+++. ++|++|+|++++||++++++++++|+++
T Consensus 220 ~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~ 294 (381)
T 3fcp_A 220 GVDLIEQPVSAHDNAALVRLSQQIETAILADEAVATAYD-----GYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAA 294 (381)
T ss_dssp TCSEEECCBCTTCHHHHHHHHHHSSSEEEESTTCCSHHH-----HHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHH
T ss_pred CccceeCCCCcccHHHHHHHHHhCCCCEEECCCcCCHHH-----HHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHc
Confidence 9999999998 789999999999999999999999753 5666654 5799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|++++++|++|++|++++++|++++++ +. ..+.+.+..++.+|++.+|+.+++ +|++||||
T Consensus 295 gi~~~~~~~~es~i~~aa~~hlaaa~~-~~--------------~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlG 359 (381)
T 3fcp_A 295 GIGLYGGTMLEGTVGTVASLHAWSTLP-LQ--------------WGTEMFGPLLLKDDIVSVPLTFADGQVALPQTPGLG 359 (381)
T ss_dssp TCEEEECCSCCCHHHHHHHHHHHTTSC-CT--------------TCBCCCGGGGBSCCSBSSCCCEETTEEECCCSSBTS
T ss_pred CCceecCCCCccHHHHHHHHHHHHhCC-Cc--------------cccccccchhhhhhccCCCceeeCCEEECCCCCCcC
Confidence 999999999999999999999999987 31 112233456678899888998884 99999999
Q ss_pred EEecchhhhhhhccccc
Q 041113 881 ASVAKATHILQNLQINN 897 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~ 897 (983)
|++| ++.++++.++.
T Consensus 360 v~~d--~~~l~~~~~~~ 374 (381)
T 3fcp_A 360 VELD--EDKLHFYTRQE 374 (381)
T ss_dssp CCBC--HHHHHHHBCC-
T ss_pred cccC--HHHHHHhhhhc
Confidence 9999 88888888764
No 5
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=3.3e-62 Score=553.32 Aligned_cols=354 Identities=17% Similarity=0.159 Sum_probs=305.7
Q ss_pred eeEeEEEEEEEEeeCCCC-Cccccc-cccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHhHh
Q 041113 493 CKICRMEYSLYRIQLCAP-PTSSYI-DHNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p-~~~~~~-~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~~l 568 (983)
|||++|+++.+++|++.| |.++.+ .. ..++.++|+|+|++|++||||+.+. + ++.++...+...++.+.|.|
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~e~~~~~~~~l~~l~~~l 78 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREY----HSYDATIVSIETDTGLTGWGESTPFGSTYIAAHAGGTRAALELLAPAI 78 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEE----SEEEEEEEEEEETTSCEEEEEECCSTTSSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEE----eeeeEEEEEEEECCCCEEEEecccCCCccCcccHHHHHHHHHHHHHHh
Confidence 899999999999999998 888744 32 3488999999999999999999876 2 44566677777788899999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..+ +..+ ...++|++|||+|||||+||.+|+|||+||||.. +++|++|+
T Consensus 79 ~G~d~~~~~~~~~~l-----~~~~-----~g~~~A~said~ALwDl~gk~~g~Pv~~LLGg~~---------~~~v~~y~ 139 (386)
T 3fv9_G 79 LGMDPRQHDRIWDRM-----RDTL-----KGHRDARAALDIACWDIAAQAAGLPLCDMTGGRV---------AGPVPVIS 139 (386)
T ss_dssp TTSCTTCHHHHHHHH-----HHHC-----SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCC---------SSCBCEEE
T ss_pred CCCCcCCHHHHHHHH-----HHHh-----cCcHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC---------CCceeeeE
Confidence 999998766655321 1111 1247899999999999999999999999999976 57899999
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC---CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc-
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARR---ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI- 724 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~---~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l- 724 (983)
++. ..+++++++++++++++||++||+|+|.. .++++|+++|++||+++|+++.|++|+|++|++++|+++++.|
T Consensus 140 s~~-~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~ 218 (386)
T 3fv9_G 140 SIG-GDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLP 218 (386)
T ss_dssp EEC-SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSC
T ss_pred ecC-CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhh
Confidence 884 67899999999999999999999999931 2689999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 725 KDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 725 ~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
+++++ |||||+++++++++|++++++||++||++++..+ +..+++. .+|++|+|++++||++++++++++|++
T Consensus 219 ~~~~i-~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~ 292 (386)
T 3fv9_G 219 PGLDI-VLEAPCASWAETKSLRARCALPLLLDELIQTETD-----LIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAA 292 (386)
T ss_dssp SSCCC-EEECCCSSHHHHHHHHTTCCSCEEESTTCCSHHH-----HHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHH
T ss_pred ccCCc-EEecCCCCHHHHHHHHhhCCCCEEeCCCcCCHHH-----HHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 89999 9999999999999999999999999999999753 6666654 579999999999999999999999999
Q ss_pred cCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCee
Q 041113 804 HGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFV 879 (983)
Q Consensus 804 ~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGl 879 (983)
+|++++++|++||+|++++++||+++++|. ...+.+++..|+.+|++.+|+.+++ +|++|||
T Consensus 293 ~gi~~~~~~~~es~i~~aa~~hlaaa~~~~--------------~~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGl 358 (386)
T 3fv9_G 293 AGMVMSVQDTVGSQISFAAILHLAQSTPRH--------------LLRCALDTRAMTTAELAEIDAPLRDGGASAPSDPGL 358 (386)
T ss_dssp TTCEEEEECSSCCHHHHHHHHHHHHTSCTT--------------TEEEEECGGGTBCCCCEECCCCSBTTBBCCCCSSBT
T ss_pred cCCEEEeCCCCCCHHHHHHHHHHHHhCCCc--------------ccccccccccchhccccCCCceEECCEEECCCCCCC
Confidence 999999999999999999999999999863 1112345667888888888888874 9999999
Q ss_pred eEEecchhhhhhh
Q 041113 880 EASVAKATHILQN 892 (983)
Q Consensus 880 Gv~~d~a~~~~~~ 892 (983)
||++| ++.+++
T Consensus 359 Gv~~d--~~~l~~ 369 (386)
T 3fv9_G 359 GLRVN--RDALGT 369 (386)
T ss_dssp CCEEC--GGGGCS
T ss_pred CceeC--HHHHhc
Confidence 99999 666533
No 6
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=6e-62 Score=550.79 Aligned_cols=352 Identities=16% Similarity=0.173 Sum_probs=290.8
Q ss_pred eeEeEEEEEEEEeeC-CCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHhHhc
Q 041113 493 CKICRMEYSLYRIQL-CAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 493 mkI~~v~~~~~~~pl-~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~~l~ 569 (983)
|||++|+++.+++|| +.||.++.+.+ ..++.++|+|+|++|++||||+.+. + +..++...+...++.+.|.|+
T Consensus 23 MkI~~i~~~~~~~pl~~~p~~~s~g~~----~~~~~~~V~i~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~p~l~ 98 (391)
T 4e8g_A 23 MKIAEIHVYAHDLPVKDGPYTIASSTV----WSLQTTLVKIVADSGLAGWGETCPVGPTYAPSHALGARAALAEMAPGLI 98 (391)
T ss_dssp CCEEEEEEEEEEC-------------------CCEEEEEEEEETTSCEEEEEECCSSTTTSSCCHHHHHHHHHHHGGGGT
T ss_pred CEEEEEEEEEEeeeCCCCCccccccee----eeeeEEEEEEEECCCCEEEecCcCCCCccCCccHHHHHHHHHHHHHHHC
Confidence 799999999999999 99999998754 3489999999999999999999876 3 334455666777888999999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.+++.++..+ ...+ ..+++|++|||||||||+||.+|+|||+||||.. +++|++|++
T Consensus 99 G~d~~~~~~~~~~l-----~~~~-----~g~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~---------r~~v~~y~s 159 (391)
T 4e8g_A 99 GANPLQPLVLRRRM-----DGLL-----CGHNYAKAAIDIAAYDLMGKHYGVRVADLLGGVA---------AERVPSYYA 159 (391)
T ss_dssp TCCTTCHHHHHHHH-----HTTC-----SSCHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCS---------CSEEECCEE
T ss_pred CCCcCCHHHHHHHH-----HHHh-----cCcHHHHHHHHHHHHHHHHHHcCChHHHhcCCCC---------CCcEEEeEE
Confidence 99988765554321 1111 1257899999999999999999999999999986 578999998
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcC-CCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVG-HRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g-~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+. ..+++++++++++++++||++||+|+|. .++++|+++|++||+++| +++.|++|+|++|++++|+++++.|++++
T Consensus 160 ~~-~~~~e~~~~~a~~~~~~G~~~~KlKvg~-~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~A~~~~~~L~~~~ 237 (391)
T 4e8g_A 160 TG-IGQPDEIARIAAEKVAEGFPRLQIKIGG-RPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRDALRLSRECPEIP 237 (391)
T ss_dssp EC-SCCHHHHHHHHHHHHHTTCSEEEEECCS-SCHHHHHHHHHHHHHHHTTTTCEEEEECTTCCCHHHHHHHHHHCTTSC
T ss_pred cC-CCCHHHHHHHHHHHHHcCCcEEEEcCCC-CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCCHHHHHHHHHHHhhcC
Confidence 84 5789999999999999999999999997 378999999999999998 99999999999999999999999999999
Q ss_pred CceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 729 LQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 729 i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
+ |||||+++++++++|++++++||++||++++..+ +..+++. .+|++|+|++++||++++++++++|+++|++
T Consensus 238 i-~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~ 311 (391)
T 4e8g_A 238 F-VLEQPCNTLEEIAAIRGRVQHGIYLDESGEDLST-----VIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALP 311 (391)
T ss_dssp E-EEESCSSSHHHHHHHGGGCCSCEEESTTCCSHHH-----HHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCC
T ss_pred e-EEecCCccHHHHHHHHhhCCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCe
Confidence 9 9999988999999999999999999999999753 6666654 4799999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCC-ceeec----cCCCCeeeEE
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDP-ISICH----NSCRGFVEAS 882 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p-~~~~~----~P~~pGlGv~ 882 (983)
+++||++||+|++++++||++++||.. + . ...+...|+..|+...+ +.+++ +|++|||||+
T Consensus 312 ~~~~~~~es~i~~aa~~hlaaa~p~~~--~---~---------~~~~~~~~~~~~~~~~~g~~~~~G~i~vp~~PGLGve 377 (391)
T 4e8g_A 312 HSCDDAWGGDIIAAACTHIGATVQPRL--N---E---------GVWVAQPYIAQPYDEENGIRIAGGHIDLPKGPGLGIT 377 (391)
T ss_dssp EEEECSSCSHHHHHHHHHHHTTSCGGG--E---E---------ECCCSGGGCSSCSCTTTCCCEETTEEECCCSSBTSCC
T ss_pred EEeCCcCCCHHHHHHHHHHHHhCCCcc--c---c---------ccccchhhhhhhccccCCceEECCEEECCCCCcCCCc
Confidence 999999999999999999999999641 1 0 11233456777776555 66773 9999999999
Q ss_pred ecchhhhhh
Q 041113 883 VAKATHILQ 891 (983)
Q Consensus 883 ~d~a~~~~~ 891 (983)
+| ++.++
T Consensus 378 ~d--~~~l~ 384 (391)
T 4e8g_A 378 PD--ESLFG 384 (391)
T ss_dssp CC--GGGTC
T ss_pred cC--HHHHh
Confidence 99 55543
No 7
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=9.4e-62 Score=547.20 Aligned_cols=354 Identities=22% Similarity=0.222 Sum_probs=307.0
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
|||++|+++.+++||+.||.++.+.+ ..++.++|+|+|++|++||||+.+.+ +++++...+...++.+.|.++|+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~~~~l~~~l~G~ 76 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGIL----THANNVIVRIHTASGHIGYGECSPFMTIHGESMDTAFIVGQYLAKGLIGT 76 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTCCEEEEEECCCHHHHSCCHHHHHHHHHHHHHHHTTS
T ss_pred CEEEEEEEEEEEeecCCCEEccCceE----eeeeEEEEEEEECCCCEEEeeccCCCCcCCCCHHHHHHHHHHHHHHhcCC
Confidence 79999999999999999999988764 45899999999999999999998875 35677777777788899999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcccccccccccee-EEEEee
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSI-KICALI 650 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i-~~~~~~ 650 (983)
++.++..++.. +++.+. ..++|++|||||||||+||.+|+|||+||||.+ .+| ++|+++
T Consensus 77 d~~~~~~~~~~-----l~~~~~-----~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~----------~~v~~~~~~~ 136 (368)
T 3q45_A 77 SCLDIVSNSLL-----MDAIIY-----GNSCIKSAFNIALYDLAAQHAGLPLYAFLGGKK----------DKIIQTDYTV 136 (368)
T ss_dssp BTTCHHHHHHH-----HHHHCS-----CCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCC----------CSCEEBCEEE
T ss_pred ChhhHHHHHHH-----HHHHhc-----CCHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CeeeeeEEEe
Confidence 99887665532 222211 247899999999999999999999999999986 357 777776
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCc
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQ 730 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~ 730 (983)
+..+++++++++++++++||++||+|+|. ++++|++++++||+++|+++.|++|+|++|+.++|+++++.|+++++.
T Consensus 137 -~~~~~e~~~~~a~~~~~~G~~~~K~KvG~--~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 213 (368)
T 3q45_A 137 -SIDEPHKMAADAVQIKKNGFEIIKVKVGG--SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQ 213 (368)
T ss_dssp -CSCCHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCS
T ss_pred -cCCCHHHHHHHHHHHHHcCCCeEEEEecC--CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCC
Confidence 35789999999999999999999999997 789999999999999999999999999999999999999999999999
Q ss_pred eeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 731 YIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 731 ~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++|+|++++||++++++++++|+++|++
T Consensus 214 ~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~ 288 (368)
T 3q45_A 214 HCEEPVSRNLYTALPKIRQACRIPIMADESCCNSFD-----AERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMP 288 (368)
T ss_dssp CEECCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHH-----HHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCC
T ss_pred EEECCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHH-----HHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCc
Confidence 9999998 678899999999999999999998753 555555 45799999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee-----ccCCCCeeeEE
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC-----HNSCRGFVEAS 882 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~-----~~P~~pGlGv~ 882 (983)
+++||++||+|++++++|+++++||+. .+++++..++.+|++.+++.++ .+|++|||||+
T Consensus 289 ~~~~~~~es~i~~aa~~hlaaa~p~~~---------------~~el~~~~~~~~d~~~~~~~~~~gG~i~~p~~PGlGv~ 353 (368)
T 3q45_A 289 VQVGGFLESRLGFTAAAHVALVSKTIC---------------YYDFDTPLMFEADPVRGGIVYQQRGIIEVPETAGLGAG 353 (368)
T ss_dssp EEECCSSCCHHHHHHHHHHHTTCTTEE---------------EECCCGGGGBSSCCEEESCEECGGGEEECCCSSBSCEE
T ss_pred EEecCccccHHHHHHHHHHHHcCCCCc---------------eeccccHHhhhhccccCCceecCCeEEEcCCCCcccee
Confidence 999999999999999999999998641 1234556667788777777765 28999999999
Q ss_pred ecchhhhhhhccc
Q 041113 883 VAKATHILQNLQI 895 (983)
Q Consensus 883 ~d~a~~~~~~~~~ 895 (983)
+| ++.++++++
T Consensus 354 ~d--~~~l~~~~~ 364 (368)
T 3q45_A 354 YQ--KDYLSGLEK 364 (368)
T ss_dssp EC--TTTGGGSEE
T ss_pred eC--HHHHHhhhh
Confidence 99 777777653
No 8
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=1.2e-61 Score=548.82 Aligned_cols=346 Identities=21% Similarity=0.230 Sum_probs=289.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g 570 (983)
.|||++|+++.+++||+.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +++++...+...++.+.|.|+|
T Consensus 26 ~mkI~~i~~~~~~~Pl~~p~~~a~g~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~p~l~G 101 (393)
T 3u9i_A 26 PTTIRALTVAPLDIPLHEPFGIASGAQ----EVARNLLVAVELTDGTRGYGEAAPFPAFNGETQDMAHAAILAARSLVEG 101 (393)
T ss_dssp TTBEEEEEEEEEEEEBCC--------------EEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHTT
T ss_pred CcEEEEEEEEEEEEecCCceEccCceE----EeeeEEEEEEEECCCCEEEEEeeCCCCcCcCCHHHHHHHHHHHHHHhcC
Confidence 489999999999999999999988764 34899999999999999999998875 3467777777778889999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+. ... ...++|++|||+|||||+||.+|+|||+||||.. ++|++|+++
T Consensus 102 ~d~~~~~~~~~~l~-----~~~-----~~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~----------~~v~~~~t~ 161 (393)
T 3u9i_A 102 ADVREWRRIALALP-----ALP-----GMTGSARCAIETAILDALTRRARLPLWAFFGGAA----------TSLETDVTI 161 (393)
T ss_dssp SBGGGHHHHHHHGG-----GST-----TCCHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSC----------SEEECCEEE
T ss_pred CCcCCHHHHHHHHH-----Hhc-----CccHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceEEEEEe
Confidence 99987665553221 111 1357999999999999999999999999999975 568888887
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC--------hHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHh
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRAD--------PIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGF 722 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~--------~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~ 722 (983)
...+++++++++++++++||++||+|+|.. + +++|+++|++||+++ +++.||||||++|++++|+++++
T Consensus 162 -~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~-~~~~~~~~~~~~di~~v~avR~a~-~d~~L~vDaN~~w~~~~A~~~~~ 238 (393)
T 3u9i_A 162 -TTGSVTAAARAAQAIVARGVTTIKIKIGAG-DPDATTIRTMEHDLARIVAIRDVA-PTARLILDGNCGYTAPDALRLLD 238 (393)
T ss_dssp -C---CHHHHHHHHHHHTTTCCEEEEECC--------CHHHHHHHHHHHHHHHHHS-TTSEEEEECCSCCCHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHHcCCCeEEEEeCCC-cccccccccHHHHHHHHHHHHHHC-CCCeEEEEccCCCCHHHHHHHHH
Confidence 356889999999999999999999999972 4 789999999999999 57999999999999999999999
Q ss_pred hc--ccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHH
Q 041113 723 LI--KDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLI 797 (983)
Q Consensus 723 ~l--~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~ 797 (983)
.| +++++.|||||++ |++++++|++++++|||+||++++..+ +..+++. .+|++|+|+++ ||+++++++
T Consensus 239 ~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~i~~k~~~-GGit~~~~i 312 (393)
T 3u9i_A 239 MLGVHGIVPALFEQPVAKDDEEGLRRLTATRRVPVAADESVASATD-----AARLARNAAVDVLNIKLMK-CGIVEALDI 312 (393)
T ss_dssp TTTTTTCCCSEEECCSCTTCTTHHHHHHHTCSSCEEESTTCCSHHH-----HHHHHHTTCCSEEEECHHH-HCHHHHHHH
T ss_pred HHhhCCCCeEEEECCCCCCcHHHHHHHHhhCCCcEEeCCcCCCHHH-----HHHHHHcCCCCEEEecccc-cCHHHHHHH
Confidence 99 9999999999998 889999999999999999999999753 5555544 57999999999 999999999
Q ss_pred HHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----c
Q 041113 798 ARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----N 873 (983)
Q Consensus 798 ~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~ 873 (983)
+++|+++|+++++||++||+|++++++||++++||+. + +++++..++.+|++.+++.+++ +
T Consensus 313 a~~A~~~gi~~~~~~~~es~ig~aa~~hlaaa~p~~~----------~-----~el~~~~~~~~d~~~~~~~~~~G~i~~ 377 (393)
T 3u9i_A 313 AAIARTAGLHLMIGGMVESLLAMTVSACFAAGQGGFR----------F-----VDLDTPLFLAENPFDGGMTYHGGTIDL 377 (393)
T ss_dssp HHHHHHHTCEEEECCSSCCHHHHHHHHHHHHHHCCEE----------E-----ECCCGGGSBSCCCEEESCEEETTEEEC
T ss_pred HHHHHHcCCeEEecCCcccHHHHHHHHHHHhcCCCCC----------e-----ecccchhhhhhcccCCCceeECCEEEC
Confidence 9999999999999999999999999999999998641 1 1345667788898888888884 9
Q ss_pred CC-CCeeeEEecc
Q 041113 874 SC-RGFVEASVAK 885 (983)
Q Consensus 874 P~-~pGlGv~~d~ 885 (983)
|+ +|||||++|+
T Consensus 378 p~~~PGlGve~d~ 390 (393)
T 3u9i_A 378 TLIEAGHGVTPRS 390 (393)
T ss_dssp TTCCSBTCEEEC-
T ss_pred CCCCCcCCcccCc
Confidence 99 9999999993
No 9
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=4.5e-62 Score=552.16 Aligned_cols=359 Identities=20% Similarity=0.187 Sum_probs=300.3
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeee-EEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCRE-GFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMT 569 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~-~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~ 569 (983)
+|||++|+++.+++||+.||.++.+++ ..++ .++|+|+|++|++||||+.+.+..+++...+...++. +.|.++
T Consensus 5 ~~kI~~i~~~~~~~Pl~~p~~~s~~~~----~~~~~~~~V~v~td~G~~G~GE~~~~~~~~e~~~~~~~~i~~~l~p~li 80 (377)
T 3my9_A 5 DSVVERIRIFLVESPIKMARLQGVGNV----KGSVKRVLLEVTSADGIVGWGEAAPWEVFTGTPEAAFSALDIYLRPLIL 80 (377)
T ss_dssp CCBEEEEEEEEEEECEEC--------------CCEEEEEEEEEETTSCEEEEEECCC-----CHHHHHHHHHTTTHHHHT
T ss_pred cCEEEEEEEEEEeccccCCeeccceEE----EeeeeEEEEEEEECCCCEEEEecccCCCcCCCHHHHHHHHHHHHHHHhC
Confidence 489999999999999999999998765 3467 9999999999999999999876434666667777776 889999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.+++.++..+ ++.+ ..+++|++|||+|||||+||.+|+|||+||||.. +++|++|++
T Consensus 81 G~d~~~~~~~~~~l-----~~~~-----~~~~~A~said~AlwDl~gk~~g~Pl~~LLGg~~---------r~~v~~~~t 141 (377)
T 3my9_A 81 GAPIKRVRELMARM-----DKML-----VGHGEAKAAVEMALLDILGKATGLSVADLLGGRV---------RDRIPLSFS 141 (377)
T ss_dssp TCBTTCHHHHHHHH-----HHHS-----CSCHHHHHHHHHHHHHHHHHHHTCBTTGGGTCCS---------CSEEEBCEE
T ss_pred CCCcCCHHHHHHHH-----HHHh-----cCchhHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCeEEEEEe
Confidence 99998876655322 2211 1257899999999999999999999999999976 578999998
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
+. ..+++++.+++++++++||++||+|+|. .++++|++++++||+++|+++.|++|+|++|+.++|+++++.|+++++
T Consensus 142 ~~-~~~~~~~~~~a~~~~~~G~~~~K~Kvg~-~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i 219 (377)
T 3my9_A 142 IA-DPDFDADLERMRAMVPAGHTVFKMKTGV-KPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRP 219 (377)
T ss_dssp EC-CSSHHHHHHHHHHHTTTTCCEEEEECSS-SCHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCC
T ss_pred cC-CCCHHHHHHHHHHHHHcCCCEEEEccCC-CcHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCC
Confidence 74 5689999999999999999999999997 368999999999999999999999999999999999999999999999
Q ss_pred ceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCC
Q 041113 730 QYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGK 806 (983)
Q Consensus 730 ~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi 806 (983)
.|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++|+|++++||++++++++++|+++|+
T Consensus 220 ~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi 294 (377)
T 3my9_A 220 TFIEQPVPRRHLDAMAGFAAALDTPILADESCFDAVD-----LMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGL 294 (377)
T ss_dssp SCEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHH-----HHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTC
T ss_pred CEEECCCCccCHHHHHHHHHhCCCCEEECCccCCHHH-----HHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 99999998 788999999999999999999999753 555554 4579999999999999999999999999999
Q ss_pred cEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccch-hcccccCCCCCceeec----cCCCCeeeE
Q 041113 807 MAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTY-QWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 807 ~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++++||+|++|++++++|++++++|+. ..+.++.. .++.+|++.+|+.+++ +|++||||+
T Consensus 295 ~~~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~e~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv 360 (377)
T 3my9_A 295 PGYGGTLWEGGIALAAGTQLIAATPGIS--------------LGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGI 360 (377)
T ss_dssp CEECCEECCSHHHHHHHHHHHHTCTTBC--------------SCBEESCTTSEECCCSSSSCCCEETTEEECCCSSBTSC
T ss_pred eEecCCCCCcHHHHHHHHHHHHhCCCCc--------------cceeecCchhhhhhhccCCCceeECCEEECCCCCCCCc
Confidence 9999999999999999999999999641 11122233 5678899888998884 999999999
Q ss_pred Eecchhhhhhhcccc
Q 041113 882 SVAKATHILQNLQIN 896 (983)
Q Consensus 882 ~~d~a~~~~~~~~~~ 896 (983)
++| ++.++++.+.
T Consensus 361 ~~d--~~~l~~~~~~ 373 (377)
T 3my9_A 361 SIS--EASLRGNAKI 373 (377)
T ss_dssp CCC--HHHHHHHSEE
T ss_pred ccC--HHHHHHhhhh
Confidence 999 8888888754
No 10
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=1.5e-61 Score=548.35 Aligned_cols=359 Identities=19% Similarity=0.204 Sum_probs=299.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
+|||++|+++.+++||+.||.++.+++. ..++.++|+|+|++|++||||+.+.+..+++...+...++. +.|.++|
T Consensus 7 ~mkI~~i~~~~~~~Pl~~p~~~s~g~~~---~~~~~~~V~v~td~G~~G~GE~~~~~~~~e~~~~~~~~i~~~l~p~l~G 83 (385)
T 3i6e_A 7 EQKIIAMDLWHLALPVVSARDHGIGRVE---GSCEIVVLRLVAEGGAEGFGEASPWAVFTGTPEASYAALDRYLRPLVIG 83 (385)
T ss_dssp CSBEEEEEEEEEECCC-----------------CEEEEEEEEETTSCEEEEEECCCTTTTCCHHHHHHHHHHTTHHHHTT
T ss_pred hcEEEEEEEEEEecccCCCeeccCcEEe---ceeeEEEEEEEECCCCEEEEeeccCCCcCCCHHHHHHHHHHHHHHHHCC
Confidence 4899999999999999999999987641 23788999999999999999999876444677777777777 8999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++.. +++.+ ...++|++|||+|||||+||.+|+|||+||||.. +++|++|+++
T Consensus 84 ~d~~~~~~~~~~-----l~~~~-----~~~~~A~said~ALwDl~gk~~g~Pl~~LLGg~~---------r~~v~~~~t~ 144 (385)
T 3i6e_A 84 RRVGDRVAIMDE-----AARAV-----AHCTEAKAALDSALLDLAGRISNLPVWALLGGKC---------RDTIPLSCSI 144 (385)
T ss_dssp CBGGGHHHHHHH-----HHHHS-----SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSEEEBEEEE
T ss_pred CCccCHHHHHHH-----HHHHh-----cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhCccc---------CCceEEEEEc
Confidence 999887665532 12221 1257899999999999999999999999999986 5789999987
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCc
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQ 730 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~ 730 (983)
. ..+++++.+++++++++||++||+|+|. .++++|++++++||+++ +++.|++|+|++|++++|+++++.|+++++.
T Consensus 145 ~-~~~~~~~~~~a~~~~~~G~~~~K~Kvg~-~~~~~d~~~v~avR~a~-~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~ 221 (385)
T 3i6e_A 145 A-NPDFDADIALMERLRADGVGLIKLKTGF-RDHAFDIMRLELIARDF-PEFRVRVDYNQGLEIDEAVPRVLDVAQFQPD 221 (385)
T ss_dssp C-CSSHHHHHHHHHHHHHHTCCEEEEECSS-SCHHHHHHHHHHHHHHC-TTSEEEEECTTCCCGGGHHHHHHHHHTTCCS
T ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEEecCC-CCHHHHHHHHHHHHHhC-CCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 4 5689999999999999999999999997 36899999999999999 9999999999999999999999999999999
Q ss_pred eeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 731 YIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 731 ~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++|+|++++||++++++++++|+++|++
T Consensus 222 ~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~ 296 (385)
T 3i6e_A 222 FIEQPVRAHHFELMARLRGLTDVPLLADESVYGPED-----MVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLM 296 (385)
T ss_dssp CEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred EEECCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHH-----HHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCE
Confidence 9999998 788999999999999999999999753 555554 45799999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCceeec----cCCCCeeeEE
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPISICH----NSCRGFVEAS 882 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~~~~----~P~~pGlGv~ 882 (983)
++++|++|++|++++++|++++++|.. ..+.+.. ..++.+|++.+|+.+++ +|++||||++
T Consensus 297 ~~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~e~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~ 362 (385)
T 3i6e_A 297 AYGGDMFEAGLAHLAGTHMIAATPEIT--------------LGCEFYQASYFLNEDILETPFRVEAGQVIVPDGPGLGAR 362 (385)
T ss_dssp EEECCCSCCHHHHHHHHHHHHTCTTEE--------------EEECCCHHHHTCSSCSBSSCCCEETTEEECCCSSBTSSC
T ss_pred EEeCCCCccHHHHHHHHHHHHhCCCCc--------------cchhhcCchhhhhhhcccCCceeECCEEECCCCCCCCce
Confidence 999999999999999999999999641 1112222 25678898888888874 9999999999
Q ss_pred ecchhhhhhhcccc
Q 041113 883 VAKATHILQNLQIN 896 (983)
Q Consensus 883 ~d~a~~~~~~~~~~ 896 (983)
+| ++.++++.+.
T Consensus 363 ~d--~~~l~~~~~~ 374 (385)
T 3i6e_A 363 AD--PEKLEHYAVR 374 (385)
T ss_dssp BC--HHHHHHHEEE
T ss_pred EC--HHHHHhhhcc
Confidence 99 8888887754
No 11
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=8.8e-62 Score=550.79 Aligned_cols=356 Identities=18% Similarity=0.200 Sum_probs=307.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.++. ..++.++|+|+| ||++||||+.+.+ ++.++.+.+...++. +.|.|
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~----~~~~~v~V~i~t-dG~~G~GE~~~~~~p~~~~e~~~~~~~~i~~~l~p~l 75 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTV----HQQSYVIVRVYS-EGLVGVGEGGSVGGPVWSAECAETIKIIVERYLAPHL 75 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEB-TTBCCEEECCCSTTTTTSSCCHHHHHHHHHHHTHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEE----EEEEEEEEEEEE-CCcEEEEEecCCCCCccCcccHHHHHHHHHHHHHHHh
Confidence 79999999999999999999998764 458999999997 5999999998753 456676666666654 78999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.++..++..+ ++.. ...++|++|||+|||||+||.+|+|||+||||.. ++.+++|.
T Consensus 76 iG~d~~~~~~~~~~~-----~~~~-----~~~~~A~said~AlwDl~gK~~g~Pl~~lLGg~~---------~~~~~~~~ 136 (370)
T 2chr_A 76 LGTDAFNVSGALQTM-----ARAV-----TGNASAKAAVEMALLDLKARALGVSIAELLGGPL---------RSAIPIAW 136 (370)
T ss_dssp TTSCTTCHHHHHHHH-----HTTC-----SSCHHHHHHHHHHHHHHHHHHTTCCHHHHTTCCS---------CSEEEBEE
T ss_pred cCCCcccHHHHHHHH-----hhcc-----cccHHHHHHHHHHHHHHHHHhcCCccccccCCcc---------ccccceee
Confidence 999998876655321 1111 2346899999999999999999999999999987 57788888
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
++....+++.+.+.++.+.+.||++||+|+|. .++++|+++++++|+++|+++.||+|+|++||+++|+++++.|++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~-~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 215 (370)
T 2chr_A 137 TLASGDTKRDLDSAVEMIERRRHNRFKVKLGF-RSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALG 215 (370)
T ss_dssp EECSSCHHHHHHHHHHHHHTTSCCEEEEECSS-SCHHHHHHHHHHHHHHTTTTSEEEEECTTCCCTHHHHHHHHHHHTTT
T ss_pred eeccCchhhhHHHHHHHHhhcccceeeccccc-CChHHHHHHHHHHHHhcCCCcEEEecCCCCCCHHHHHHHHHHHHhcC
Confidence 77666677778888888888999999999997 47899999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ |++++++|++++++|||+||++++..+ +..+++.+ +|++|+|++++|||+++++++++|+++|
T Consensus 216 ~~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~g 290 (370)
T 2chr_A 216 VELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLAS-----AFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASG 290 (370)
T ss_dssp CCEEECCSCSSCHHHHHHHHHHCSSEEEESSSCCSHHH-----HHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHT
T ss_pred CceecCCCChhhhhhhhHHhhhccCCccCCccCCCHHH-----HHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcC
Confidence 999999998 789999999999999999999999763 66666654 7999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++++||+++++|++++++|+++++||+. ..+.+..+.++.++++.+|+.+++ +|++|||||
T Consensus 291 i~~~~~~~~~~~i~~aa~~hlaa~~p~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGv 356 (370)
T 2chr_A 291 IASYGGTMLDSTIGTSVALQLYSTVPSLP--------------FGCELIGPFVLADTLSHEPLEIRDYELQVPTGVGHGM 356 (370)
T ss_dssp CEECCCCCSCCHHHHHHHHHHHTTSSCCT--------------TCBCCCHHHHBSCCSBSCCCCBCSSEEECCCSSSTTC
T ss_pred CeEEeCCCcccHHHHHHHHHHHHhCCCCC--------------cccccCchhhhhhhccCCCceEECCEEECCCCCCCCc
Confidence 99999999999999999999999998642 112234556677888889998884 999999999
Q ss_pred Eecchhhhhhhcc
Q 041113 882 SVAKATHILQNLQ 894 (983)
Q Consensus 882 ~~d~a~~~~~~~~ 894 (983)
++| ++.+++|.
T Consensus 357 e~d--~~~l~~y~ 367 (370)
T 2chr_A 357 TLD--EDKVRQYA 367 (370)
T ss_dssp CBC--HHHHHHHC
T ss_pred eEC--HHHHHHhh
Confidence 999 88888874
No 12
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=4.3e-61 Score=543.21 Aligned_cols=355 Identities=18% Similarity=0.150 Sum_probs=302.5
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHhHhc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~~l~ 569 (983)
+|||++|+++.+++||+.||.++.+.+ ....++.++|+|+|++|++||||+.+. + ++.++...+...++.+.|.|+
T Consensus 2 ~MkI~~i~~~~~~~pl~~p~~~s~g~~--~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~p~l~ 79 (378)
T 3eez_A 2 SLKITRITVYQVDLPLEHPYWLSGGRL--KFELLDATLVKLETDAGITGWGEGTPWGHTYVPAHGPGIRAGIETMAPFVL 79 (378)
T ss_dssp -CCEEEEEEEEEEEEBSSCCC--------CCCEEEEEEEEEEETTCCCEEEEECCSCSSSSSCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEEEEEeccCCCceeecCCcc--eeeeeeEEEEEEEECCCCEEEecccCCCCccCCCcHHHHHHHHHHHHHHhc
Confidence 389999999999999999999887621 013489999999999999999999876 3 445566667777888999999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.+++.++..+ ...+ ...++|++|||+|||||+||.+|+|||+||||.. +++||+|++
T Consensus 80 G~d~~~~~~~~~~l-----~~~~-----~g~~~A~said~ALwDl~gk~~g~Pl~~LlGg~~---------r~~v~~~~~ 140 (378)
T 3eez_A 80 GLDPRRLLDVERAM-----DIAL-----PGHLYAKSPIDMACWDIAGQAAGLPIADLMGGGS---------RTPRPIASS 140 (378)
T ss_dssp TSCTTCHHHHHHHH-----HHHS-----SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCC---------CSCEEBBCC
T ss_pred CCCcCCHHHHHHHH-----HHHh-----cCcHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCC---------CCeEEEEEE
Confidence 99998766655321 1111 1247899999999999999999999999999986 578999988
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
+. ..+++++++++++++++||++||+|+|. ++++|+++|++||+++|+++.|++|+|++|+.++|+++++.|+++++
T Consensus 141 ~~-~~~~e~~~~~a~~~~~~G~~~iKiK~G~--~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (378)
T 3eez_A 141 VG-AKSVEETRAVIDRYRQRGYVAHSVKIGG--DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV 217 (378)
T ss_dssp BC-SCCHHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC
T ss_pred ec-CCCHHHHHHHHHHHHhCCCCEEEeccCC--CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe
Confidence 74 6789999999999999999999999997 79999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcE
Q 041113 730 QYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMA 808 (983)
Q Consensus 730 ~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~ 808 (983)
|||||++++++++++++++++||++||++++..+ +..+++. ++|++|+|++++||++++++++++|+++|+++
T Consensus 218 -~iEqP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~ 291 (378)
T 3eez_A 218 -MFEQPGETLDDIAAIRPLHSAPVSVDECLVTLQD-----AARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDM 291 (378)
T ss_dssp -CEECCSSSHHHHHHTGGGCCCCEEECTTCCSHHH-----HHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred -EEecCCCCHHHHHHHHhhCCCCEEECCCCCCHHH-----HHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999999999999753 5555554 57999999999999999999999999999999
Q ss_pred EeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCC-Cceeec----cCCCCeeeEEe
Q 041113 809 VVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTD-PISICH----NSCRGFVEASV 883 (983)
Q Consensus 809 ~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~-p~~~~~----~P~~pGlGv~~ 883 (983)
+++|++||+|++++++||+++++|.. ..+.+++..|+.+|+..+ |+.+++ +|++|||||++
T Consensus 292 ~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~~~~~~~~~~~d~~~~~~~~~~~G~i~~p~~PGlGv~~ 357 (378)
T 3eez_A 292 FVMATGGSVLADAEALHLAATIPDHA--------------CHAVWACQDMLTVDIAGGRGPRNIDGHLHLPETPGLGVHP 357 (378)
T ss_dssp EEECSSCSHHHHHHHHHHHHTSCGGG--------------BCCBCCSGGGBSCCTTTTCSSCCBTTEECCCCSSBTSCCC
T ss_pred EcCCCCCCHHHHHHHHHHHHhCCCcc--------------ceeeccccchhhhhcccCCCCeeECCEEECCCCCCCCccc
Confidence 99999999999999999999998631 112345667888898877 788874 99999999999
Q ss_pred cchhhhhhh
Q 041113 884 AKATHILQN 892 (983)
Q Consensus 884 d~a~~~~~~ 892 (983)
| ++.+++
T Consensus 358 d--~~~l~~ 364 (378)
T 3eez_A 358 D--EDALGD 364 (378)
T ss_dssp C--TTSSCS
T ss_pred C--HHHHhC
Confidence 9 555433
No 13
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=9.8e-62 Score=549.34 Aligned_cols=355 Identities=22% Similarity=0.223 Sum_probs=302.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g 570 (983)
+|||++|+++.+++||+.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +++++...+...++.+.|.|+|
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~l~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~~~l~G 79 (389)
T 3s5s_A 4 PTLIRRVSIEALDIPLHEPFGIAGGAQ----ERAANLLVTVELADGTLGFGEAAPLPAFNGETQDGSRAAAVSLREAVVG 79 (389)
T ss_dssp TTBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHTT
T ss_pred CCEEEEEEEEEEEEecCCceeccCceE----EeeeEEEEEEEECCCCEEEEeccCCCCcCccCHHHHHHHHHHHHHHhcC
Confidence 489999999999999999999988764 45899999999999999999999875 3567777777778889999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchh-hHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFP-SVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
+++.+++.++..+ ...+. ..+ +|++|||+|||||+||.+|+|||+||||.. ++|++|++
T Consensus 80 ~d~~~~~~~~~~l-----~~~~~-----~~~~~A~said~ALwDl~gk~~g~Pl~~LLGg~~----------~~v~~~~t 139 (389)
T 3s5s_A 80 SDARAWRAVARAL-----REASG-----GGAGAARCAIETAILDALTKRAGMPLWAFFGGSG----------TALTTDIT 139 (389)
T ss_dssp SBGGGHHHHHHHH-----HHHHT-----TCCHHHHHHHHHHHHHHHHHTTTCBHHHHTTCSC----------SEEECCEE
T ss_pred CCccCHHHHHHHH-----HHhhc-----cChHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceEEEee
Confidence 9998766555322 11111 124 899999999999999999999999999975 56888888
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc--ccC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI--KDC 727 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l--~~~ 727 (983)
+. ..+++++++++++++++||++||+|+|.. ++++|+++|++||+++ +++.||||||++||+++|+++++.| +++
T Consensus 140 ~~-~~~~e~~~~~a~~~~~~G~~~iKlKvg~~-~~~~d~~~v~avR~~~-~~~~L~vDaN~~w~~~~A~~~~~~L~~~~~ 216 (389)
T 3s5s_A 140 IT-TGSPERAEEAARRAAAMGFRALKVKVGGR-LAASDPARIEAIHAAA-PGASLILDGNGGLTAGEALALVAHARRLGA 216 (389)
T ss_dssp EC-SSCSHHHHHHHHHHHHHTCCEEEEECCGG-GTTTHHHHHHHHHHHC-TTCEEEEECTTCSCHHHHHHHHHHHHHTTC
T ss_pred ec-CCCHHHHHHHHHHHHHcCCCeEEEEecCC-ChHHHHHHHHHHHHhC-CCCeEEEECCCCCCHHHHHHHHHHHhhCCC
Confidence 73 56899999999999999999999999972 4789999999999999 5789999999999999999999999 999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ |++++++|++++++|||+||++++..+ +..+++. .+|++|+|+++ ||++++++++++|+++
T Consensus 217 ~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~-----~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~ 290 (389)
T 3s5s_A 217 DVALLEQPVPRDDWDGMKEVTRRAGVDVAADESAASAED-----VLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAA 290 (389)
T ss_dssp EEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHH-----HHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHT
T ss_pred CeEEEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHH-----HHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHc
Confidence 9999999998 789999999999999999999998753 5555544 57999999999 9999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCC-CCee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSC-RGFV 879 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~-~pGl 879 (983)
|+++++||++||+||+++++||++++||+. + +++++..++.+|++.+++.+++ +|+ +|||
T Consensus 291 gi~~~~~~~~es~ig~aa~~hlaaa~p~~~----------~-----~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~~PGl 355 (389)
T 3s5s_A 291 GLGLMIGGMVESVLAMTASACFAAGLGGFS----------F-----VDLDTPLFLAENPFDGGFVQRGPALSLEGIRAGH 355 (389)
T ss_dssp TCEEEECCSSCCHHHHHHHHHHHHHHCCEE----------E-----ECCCGGGGBSCCCEECSCEEETTEEECTTCCSBT
T ss_pred CCeEEecCCcccHHHHHHHHHHHhhCCCCC----------e-----eeccchhhhhhccccCCceeECCEEECCCCCCcC
Confidence 999999999999999999999999998641 1 1345667788898888888884 999 9999
Q ss_pred eEEecchhhhhhhcccc
Q 041113 880 EASVAKATHILQNLQIN 896 (983)
Q Consensus 880 Gv~~d~a~~~~~~~~~~ 896 (983)
||++| ++.++++..+
T Consensus 356 Gve~d--~~~~~~~~~~ 370 (389)
T 3s5s_A 356 GVTPQ--RRSPAAGAEN 370 (389)
T ss_dssp CCEEC--------CCEE
T ss_pred CcccC--HHHHhhccch
Confidence 99999 8887777654
No 14
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=5.6e-61 Score=541.21 Aligned_cols=355 Identities=20% Similarity=0.284 Sum_probs=299.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHH-HHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLR-FLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~-~~~~~l~g 570 (983)
|||++|+++.+++||+.||.++.+.+ ..++.++|+|+|++|++||||+.+.+ +++++...+...++ .+.|.++|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~i~~~l~~~l~G 76 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEV----HAAEHVLVRVHTDDGIVGVAEAPPRPFTYGETQTGIVAVIEQYFAPALIG 76 (367)
T ss_dssp CBEEEEEEEEEEECBC---------------CEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEE----eeeeEEEEEEEECCCCEEEEeccCCCCccCCCHHHHHHHHHHHHHHHHcC
Confidence 79999999999999999999988765 34899999999999999999998876 35677777777777 68999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+ ... ...++|++|||+|||||+||.+|+|||+|||| . +++|++|+++
T Consensus 77 ~d~~~~~~~~~~l-----~~~------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg-~---------~~~v~~~~~~ 135 (367)
T 3dg3_A 77 LTLTEREVAHTRM-----ART------VGNPTAKAAIDMAMWDALGQSLRLSVSEMLGG-Y---------TDRMRVSHML 135 (367)
T ss_dssp CBTTCHHHHHHHH-----TTS------CSCHHHHHHHHHHHHHHHHHHHTCBHHHHHTC-C---------CSEEEEEEEE
T ss_pred CCcCCHHHHHHHH-----Hhc------cCchHHHHHHHHHHHHHHHHHcCCcHHHHhCC-C---------CCeEEEEEEe
Confidence 9988765554321 111 23578999999999999999999999999999 4 4789999887
Q ss_pred cCCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChH-HHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 651 DSNKSPVEVASIATTLVEE-GFTAIKLKVARRADPI-KDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~-~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+ ..+++++++++++++++ ||++||+|+|. ++. +|+++|++||+++|+++.|++|+|++|+.++|+++++.|++++
T Consensus 136 ~-~~~~~~~~~~a~~~~~~~G~~~~K~K~g~--~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 212 (367)
T 3dg3_A 136 G-FDDPVKMVAEAERIRETYGINTFKVKVGR--RPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLD 212 (367)
T ss_dssp E-SSCHHHHHHHHHHHHHHHCCCEEEEECCC--SSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSC
T ss_pred c-CCCHHHHHHHHHHHHHhcCccEEEEeeCC--ChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 4 56899999999999998 99999999997 455 9999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++|+|++++ |++++++++++|+++|
T Consensus 213 i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~g 286 (367)
T 3dg3_A 213 LLFAEELCPADDVLSRRRLVGQLDMPFIADESVPTPAD-----VTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLG 286 (367)
T ss_dssp CSCEESCSCTTSHHHHHHHHHHCSSCEEECTTCSSHHH-----HHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHT
T ss_pred CCEEECCCCcccHHHHHHHHHhCCCCEEecCCcCCHHH-----HHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcC
Confidence 999999998 788899999999999999999998753 5555544 479999999999 9999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++++|||++|+||+++++||+++++|.. ...+.++++.++.+|++.+|+.+++ +|++|||||
T Consensus 287 i~~~~~~~~es~i~~aa~~hlaaa~~~~~-------------~~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv 353 (367)
T 3dg3_A 287 LDMVMGNQIDGQIGTACTVSFGTAFERTS-------------RHAGELSNFLDMSDDLLTVPLQISDGQLHRRPGPGLGI 353 (367)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHTTCHHHH-------------TSCEECCGGGGBSCCSBSSCCCCBTTEEECCSSSBTSC
T ss_pred CeEEECCcCCcHHHHHHHHHHHHhCCccc-------------CcchhccchhhhhhcccCCCceeeCCEEECCCCCcCCc
Confidence 99999999999999999999999998421 1112344556778899888988884 999999999
Q ss_pred Eecchhhhhhhcccc
Q 041113 882 SVAKATHILQNLQIN 896 (983)
Q Consensus 882 ~~d~a~~~~~~~~~~ 896 (983)
++| ++.+++++++
T Consensus 354 ~~d--~~~l~~~~~~ 366 (367)
T 3dg3_A 354 EID--PDKLAHYRTD 366 (367)
T ss_dssp CBC--HHHHHHHBCC
T ss_pred eEC--HHHHHHhhcC
Confidence 999 8888888764
No 15
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=8.8e-61 Score=538.14 Aligned_cols=345 Identities=19% Similarity=0.209 Sum_probs=295.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g 570 (983)
+|||++|+++.+++||+.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +++++...+...++.+.|.|+|
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~l~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~~~l~G 79 (365)
T 3ik4_A 4 PTTIQAISAEAINLPLTEPFAIASGAQ----AVAANVLVKVQLADGTLGLGEAAPFPAVSGETQTGTSAAIERLQSHLLG 79 (365)
T ss_dssp TTBEEEEEEEEEEEEBSCC------------CEEEEEEEEEEETTSCEEEEEECCCCTTTCCCHHHHHHHHHHHGGGTTT
T ss_pred CCEEEEEEEEEEEEecCCCeEccCeEE----EeeeEEEEEEEECCCCEEEEecccCCCcCcCCHHHHHHHHHHHHHHHcC
Confidence 489999999999999999999998765 35899999999999999999999876 4567777777778889999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++.. +...+ ...++|++|||+|||||+||.+|+|||+||||.. ++|++|+++
T Consensus 80 ~d~~~~~~~~~~-----l~~~~-----~~~~~a~said~ALwDl~gk~~g~Pl~~LLGg~~----------~~v~~~~~~ 139 (365)
T 3ik4_A 80 ADVRGWRKLAAM-----LDHAE-----HEAAAARCGLEMAMLDALTRHYHMPLHVFFGGVS----------KQLETDMTI 139 (365)
T ss_dssp CBGGGHHHHHHH-----HHHHC-----TTCHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSC----------SEEEBCEEE
T ss_pred CCccCHHHHHHH-----HHHHh-----cccHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceeeeEEe
Confidence 998876555432 22211 1257899999999999999999999999999975 578988887
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc--ccCC
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI--KDCD 728 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l--~~~~ 728 (983)
. ..+++++++++++++++||++||+|+|. .++++|+++|++||+++ +++.||+|+|++|++++|+++++.| ++++
T Consensus 140 ~-~~~~e~~~~~a~~~~~~G~~~iK~Kvg~-~~~~~d~~~v~avr~~~-~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~ 216 (365)
T 3ik4_A 140 T-AGDEVHAAASAKAILARGIKSIKVKTAG-VDVAYDLARLRAIHQAA-PTAPLIVDGNCGYDVERALAFCAACKAESIP 216 (365)
T ss_dssp C-CSCHHHHHHHHHHHHHTTCCCEEEECCS-SCHHHHHHHHHHHHHHS-SSCCEEEECTTCCCHHHHHHHHHHHHHTTCC
T ss_pred c-CCCHHHHHHHHHHHHHcCCCEEEEEeCC-CCHHHHHHHHHHHHHhC-CCCeEEEECCCCCCHHHHHHHHHHHhhCCCC
Confidence 4 5789999999999999999999999997 35899999999999999 5789999999999999999999999 9999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ |++++++|++++++||++||++++..+ +..+++ ..+|++|+|+++ ||++++++++++|+++|
T Consensus 217 i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~g 290 (365)
T 3ik4_A 217 MVLFEQPLPREDWAGMAQVTAQSGFAVAADESARSAHD-----VLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAG 290 (365)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHH-----HHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHT
T ss_pred ceEEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHH-----HHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcC
Confidence 999999998 789999999999999999999998753 555554 457999999999 99999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++++|+++||+|++++++||++++||+. + +++++..++.+|++.+++.+++ +|++||||+
T Consensus 291 i~~~~~~~~es~ig~aa~~hlaaa~p~~~----------~-----~el~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv 355 (365)
T 3ik4_A 291 LGLMIGGMVESILAMSFSANLAAGNGGFD----------F-----IDLDTPLFIAEHPFIGGFAQTGGTLQLADVAGHGV 355 (365)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHCCEE----------E-----ECCCGGGGBSCCSEEESCEEETTEEECCSCSBTCE
T ss_pred CeEEecCCcccHHHHHHHHHHHHhCCCCC----------e-----eccccchhhhhcccCCCceeECCEEECCCCCccCC
Confidence 99999999999999999999999998641 1 2345667888899888888884 999999999
Q ss_pred Eec
Q 041113 882 SVA 884 (983)
Q Consensus 882 ~~d 884 (983)
|+.
T Consensus 356 e~~ 358 (365)
T 3ik4_A 356 NLE 358 (365)
T ss_dssp EEC
T ss_pred CCC
Confidence 976
No 16
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=1.2e-60 Score=542.52 Aligned_cols=366 Identities=19% Similarity=0.212 Sum_probs=302.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.+++||+.||.++.+.+ ..++.++|||+|++|++|||||.+.... .....+.+.|.|+|++
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~----~~~~~vlV~i~td~G~~G~GE~~~~~~~------~~~~~~~~~~~liG~d 70 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRF----DRRAHVLVEIECDDGTVGWGECLGPARP------NAAVVQAYSGWLIGQD 70 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEECSCHHH------HHHHHHHHHTTTTTSC
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEE----EEEEEEEEEEEECCCCEEEEEecCCcch------HHHHHHHHHHHHcCCC
Confidence 79999999999999999999998765 4599999999999999999999764311 1234467889999999
Q ss_pred ccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC
Q 041113 573 ISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS 652 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~ 652 (983)
+.+++.++..++. ........+...+|++|||+|||||+||.+|+|||+||||.. ++++++|++...
T Consensus 71 ~~~~e~~~~~l~~----~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGg~~---------~~~~~~y~~~~~ 137 (378)
T 4hpn_A 71 PRQTEKIWAVLYN----ALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLGGRW---------RESVRAYATGSF 137 (378)
T ss_dssp TTCHHHHHHHHHH----HTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSEEEEEEECCC
T ss_pred hHHHHHHHHHHHH----HhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccCCcc---------ccCcceeeeecc
Confidence 9887666543221 111112234567899999999999999999999999999987 678999987532
Q ss_pred ----CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 653 ----NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 653 ----~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
...+++.++++.+++++||+++|+|+|. ++++|+++|+++|+++|+++.||||+|++||+++|+++++.|++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~Gf~~~K~k~g~--~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 215 (378)
T 4hpn_A 138 KRDNVDRVSDNASEMAERRAEGFHACKIKIGF--GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFG 215 (378)
T ss_dssp BCTTCCHHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred ccccchhHHHHHHHHHHHHHhccceecccccC--ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcc
Confidence 2346777888888889999999999997 7999999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ |++++++|++++++|||+||++++..+ +..+++. .+|++|+|++++|||+++++++++|+++|
T Consensus 216 i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~g 290 (378)
T 4hpn_A 216 IDWFEEPVVPEQLDAYARVRAGQPIPVAGGETWHGRYG-----MWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHG 290 (378)
T ss_dssp CSCEECCSCTTCHHHHHHHHHHSSSCEEECTTCCHHHH-----HHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHT
T ss_pred cchhhcCCCccchhhhHHHHhhCCceeeCCcCccchHh-----HHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcC
Confidence 999999998 789999999999999999999999764 5666654 57999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++ ++|++++++++++++|+++++++..... ....+...+ ..+..+|.++++.+|+.+++ +|++|||||
T Consensus 291 i~v-~~h~~~~~i~~aa~~h~~aa~~~~~~~~-----~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGv 363 (378)
T 4hpn_A 291 VRI-VPHVWGTGVQIAAALQFMAAMTPDPVRV-----NPIEPIMEF-DRTHNPFRQAVLREPLEAVNGVVTIPDGPGLGI 363 (378)
T ss_dssp CEE-CCBCCSSHHHHHHHHHHHHHCCCSSCCS-----SCCCCCEEE-ECSCCHHHHHTBSSCCCCBTTEEECCCSSBTSC
T ss_pred CeE-EeCCCCcHHHHHHHHHHHHHcCcccccc-----cccccceee-ccccchhhhhhccCCCeeECCEEECCCCCCCcc
Confidence 995 6899999999999999999887531100 000011111 11234567788899998884 999999999
Q ss_pred Eecchhhhhhhccccc
Q 041113 882 SVAKATHILQNLQINN 897 (983)
Q Consensus 882 ~~d~a~~~~~~~~~~~ 897 (983)
++| ++.++++++.+
T Consensus 364 e~d--~~~l~~y~v~d 377 (378)
T 4hpn_A 364 EIN--RDALTEFRMPD 377 (378)
T ss_dssp CBC--HHHHHHTBCCC
T ss_pred eEC--HHHHhhCCCCC
Confidence 999 99999998754
No 17
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=4.4e-60 Score=536.15 Aligned_cols=354 Identities=20% Similarity=0.272 Sum_probs=299.3
Q ss_pred cCCccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHh
Q 041113 487 SCSLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLH 566 (983)
Q Consensus 487 ~~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~ 566 (983)
.++| |||++|+++.+++|++.||.++.+.. ..++.++|||+|++|++||||+.+. ++ +...++.+.|
T Consensus 20 ~~~m--MkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~v~td~G~~G~GE~~~g----~~---~~~~i~~l~p 86 (398)
T 4dye_A 20 FQSM--MKITDVDVWVVNLPLVNPFTSSFETK----TGETRTVVRVRTDSGVEGWGETMWG----AP---VAAIVRRMAP 86 (398)
T ss_dssp ---C--CCEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEEECS----HH---HHHHHHHHHH
T ss_pred cCCC--ceEEEEEEEEEeeccccccccccccc----ccceEEEEEEEECCCCEEEEeecCc----hH---HHHHHHHHHH
Confidence 4566 99999999999999999999998754 3488999999999999999999762 22 3455678999
Q ss_pred HhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 567 FMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 567 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
.++|+++.+++.++..+.....+. + ...++|++|||+|||||+||.+|+|||+||||.. +++|++
T Consensus 87 ~liG~d~~~~~~~~~~l~~~~~~~--g----~~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~---------r~~v~~ 151 (398)
T 4dye_A 87 DLIGTSPFALEAFHRKQHMVPFFY--G----YLGYAAIAAVDVACWDAMGKATGQSVTDLLGGAV---------RDEVPI 151 (398)
T ss_dssp HHTTCCTTCHHHHHHHTTTHHHHH--H----HHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSEEEB
T ss_pred HHcCCCccCHHHHHHHHHhhhhhh--c----cccHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCc---------CCeEEE
Confidence 999999988766665432211010 0 1235899999999999999999999999999976 578999
Q ss_pred EEeec-----CC---CCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHH
Q 041113 647 CALID-----SN---KSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEA 717 (983)
Q Consensus 647 ~~~~~-----~~---~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a 717 (983)
|+++. +. .+++++++++++++++ ||++||+|+|. ++++|++++++||+++ +++.|+||+|++|++++|
T Consensus 152 y~s~~~~~~~g~~~~~~~e~~~~~a~~~~~~~G~~~~K~KvG~--~~~~d~~~v~avR~~~-~~~~l~vDaN~~w~~~~A 228 (398)
T 4dye_A 152 TALITRADAPGATPADLPKAMAEHAVRVVEEGGFDAVKLKGTT--DCAGDVAILRAVREAL-PGVNLRVDPNAAWSVPDS 228 (398)
T ss_dssp EEEECGGGSTTCCTTTHHHHHHHHHHHHHHHHCCSEEEEECCS--CHHHHHHHHHHHHHHC-TTSEEEEECTTCSCHHHH
T ss_pred EEEEeccccCCcccCCCHHHHHHHHHHHHHhcCCCEEEEecCC--CHHHHHHHHHHHHHhC-CCCeEEeeCCCCCCHHHH
Confidence 98762 11 2369999999999999 99999999995 7999999999999999 999999999999999999
Q ss_pred HHHHhhcccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHH
Q 041113 718 LEFGFLIKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGL 796 (983)
Q Consensus 718 ~~~~~~l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~ 796 (983)
+++++.|+++++.|||||+++++++++|++++++||++||++.+..+ +..+++. .+|++|+|++++||++++++
T Consensus 229 ~~~~~~l~~~~i~~iEqP~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~~k~~~~GGit~~~~ 303 (398)
T 4dye_A 229 VRAGIALEELDLEYLEDPCVGIEGMAQVKAKVRIPLCTNMCVVRFED-----FAPAMRLNAVDVIHGDVYKWGGIAATKA 303 (398)
T ss_dssp HHHHHHHGGGCCSEEECCSSHHHHHHHHHHHCCSCEEESSSCCSGGG-----HHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHHHHhhcCCCEEcCCCCCHHHHHHHHhhCCCCEEeCCcCCCHHH-----HHHHHHhCCCCEEEeCccccCCHHHHHH
Confidence 99999999999999999999889999999999999999999999875 5555544 57999999999999999999
Q ss_pred HHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----
Q 041113 797 IARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH---- 872 (983)
Q Consensus 797 ~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~---- 872 (983)
++++|+++|+++++|++.+++|+.++++|+++++||.. ..+ .....++.+|++ +|+.+++
T Consensus 304 ia~~A~~~gi~~~~h~~~e~~i~~aa~l~laaa~p~~~--------------~~~-d~~~~~~~~d~~-~~~~~~~G~i~ 367 (398)
T 4dye_A 304 LAAHCETFGLGMNLHSGGELGIATAAHLAVVSSTPVLS--------------RAI-DSMYYLHADDII-EPLHLENGRLR 367 (398)
T ss_dssp HHHHHHHHTCEEEECCSCCCHHHHHHHHHHHHTCTTCC--------------SCB-CCSGGGBSCCSB-SCCCEETTEEE
T ss_pred HHHHHHHcCCeEEEcCCcchHHHHHHHHHHHhcCCccc--------------eee-cccchhhhhhcc-CCceeeCCEEE
Confidence 99999999999999999999999999999999998631 111 112456777887 6888874
Q ss_pred cCCCCeeeEEecchhhhhhhcc
Q 041113 873 NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 873 ~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
+|++|||||++| ++.++++.
T Consensus 368 vp~~PGlGve~d--~~~l~~~~ 387 (398)
T 4dye_A 368 VPSGPGLGVSVD--EDKLRHYA 387 (398)
T ss_dssp CCCSSBTCCCBC--HHHHHHHH
T ss_pred CCCCCCCCceeC--HHHHHHHH
Confidence 999999999999 77777765
No 18
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=4.1e-61 Score=540.05 Aligned_cols=345 Identities=21% Similarity=0.226 Sum_probs=292.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHH-HHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
|||++|+++.+++||+.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +++++...+...++. +.|.++|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~~l~~~l~G 76 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSI----EEIDNLIVEIRTADGLLGLGAASPERHVTGETLEACHAALDHDRLGWLMG 76 (356)
T ss_dssp CBEEEEEEEEEEEEBC--------------CEEEEEEEEEEETTSCEEEEEECCCHHHHCCCHHHHHHHHCGGGCTTTTT
T ss_pred CEEEEEEEEEEEecccCCEEecCeEE----EeeeEEEEEEEECCCCEEEecccCCCCcCcCCHHHHHHHHHHHhHHHhcC
Confidence 79999999999999999999998764 45899999999999999999998865 345666666666654 8899999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+ +..+ ...++|++|||+|||||+||.+|+|||+||||.+ ++|++|+++
T Consensus 77 ~~~~~~~~~~~~l-----~~~~-----~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~----------~~v~~~~~~ 136 (356)
T 3ro6_B 77 RDIRTLPRLCREL-----AERL-----PAAPAARAALDMALHDLVAQCLGLPLVEILGRAH----------DSLPTSVTI 136 (356)
T ss_dssp CBGGGHHHHHHHH-----HHHC-----TTCHHHHHHHHHHHHHHHHHHHTSBHHHHTCCCC----------SCEEBCEEE
T ss_pred CCccCHHHHHHHH-----HHhh-----ccchhHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceeeeEEE
Confidence 9998876655321 2221 1257899999999999999999999999999975 569999887
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCc
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQ 730 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~ 730 (983)
. ..+++++++++++++++||++||+|+|. ++++|++++++||+++|+++.|++|+|++|++++|+++++.|+++++.
T Consensus 137 ~-~~~~~~~~~~a~~~~~~G~~~~K~K~G~--~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 213 (356)
T 3ro6_B 137 G-IKPVEETLAEAREHLALGFRVLKVKLCG--DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIE 213 (356)
T ss_dssp C-SCCHHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCC
T ss_pred c-CCCHHHHHHHHHHHHHcCCCEEEEEeCC--CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 3 5789999999999999999999999997 799999999999999999999999999999999999999999999999
Q ss_pred eeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC--CceEEEEcCCCcCCHHHHHHHHHHHHHcCC
Q 041113 731 YIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP--GIVAIVIKPSVIGGFENAGLIARWAQRHGK 806 (983)
Q Consensus 731 ~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~--~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi 806 (983)
|||||++ +++++++|++++++||++||++++..+ +..+++. ++|++|+|++++||++++++++++|+++|+
T Consensus 214 ~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi 288 (356)
T 3ro6_B 214 FIEQPFPAGRTDWLRALPKAIRRRIAADESLLGPAD-----AFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGI 288 (356)
T ss_dssp CEECCSCTTCHHHHHTSCHHHHHTEEESTTCCSHHH-----HHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCcHHHHHHHHhcCCCCEEeCCcCCCHHH-----HHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCC
Confidence 9999998 788899999999999999999998753 6666664 579999999999999999999999999999
Q ss_pred cEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEE
Q 041113 807 MAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEAS 882 (983)
Q Consensus 807 ~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~ 882 (983)
++++||++||+|++++++|+++++||+.. +.+++..++.+|++.+++.+++ +|++|||||
T Consensus 289 ~~~~~~~~es~i~~aa~~hlaaa~p~~~~---------------~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv- 352 (356)
T 3ro6_B 289 DLMWGCMDESRISIAAALHAALACPATRY---------------LDLDGSFDLARDVAEGGFILEDGRLRVTERPGLGL- 352 (356)
T ss_dssp EEEECCCSCCHHHHHHHHHHHHTCTTEEE---------------ECCCTTTTBSCCSCEESCEEETTEEECCSSSBTCE-
T ss_pred EEEecCCcccHHHHHHHHHHHhcCCCCCe---------------EecccchhhhhccccCCceeECCEEECCCCCeeee-
Confidence 99999999999999999999999996421 1234456778888888888874 999999999
Q ss_pred ecc
Q 041113 883 VAK 885 (983)
Q Consensus 883 ~d~ 885 (983)
+|+
T Consensus 353 ~d~ 355 (356)
T 3ro6_B 353 VYP 355 (356)
T ss_dssp EC-
T ss_pred cCC
Confidence 993
No 19
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=2.7e-60 Score=537.37 Aligned_cols=358 Identities=21% Similarity=0.235 Sum_probs=303.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+++ ..++.++|+|+|++|++||||+.+. + ++.++...+...++. +.|.+
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~----~~~~~~~V~v~td~G~~G~GE~~~~~~p~~~~e~~~~~~~~l~~~l~p~l 76 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHI----REKQAILVQLVDADGIEGWSECVALAEPTYTEECTDTAWVMLVHHLVPRF 76 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEE----EEEEEEEEEEEETTSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEE----EeeeEEEEEEEECCCCEEEEecccCCCCccccccHHHHHHHHHHHHHHHH
Confidence 79999999999999999999998764 4589999999999999999999864 2 456777766666655 78999
Q ss_pred c-------cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcccccccccc
Q 041113 569 T-------GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRS 641 (983)
Q Consensus 569 ~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~ 641 (983)
+ |+++.+...++.. +..+ ...++|++|||||||||+||.+|+|||+||||.+
T Consensus 77 ~~~~~~~~G~~~~~~~~~~~~------~~~~-----~g~~~A~said~ALwDl~gk~~g~Pl~~LLGg~r---------- 135 (388)
T 3qld_A 77 ARWLRAASQDQDVDPRTVCEA------LRDV-----RGNRMSVAAIEMAVWDWYAARTGQPLVGLLGGGR---------- 135 (388)
T ss_dssp HHHHTSGGGSSCCCGGGGGGG------GTTC-----CSCHHHHHHHHHHHHHHHHHHHTCCHHHHTTCCC----------
T ss_pred hhhhcccCCCCccCHHHHHHH------HHHc-----cCcHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------
Confidence 9 9877665444321 1111 1257899999999999999999999999999953
Q ss_pred ceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHH
Q 041113 642 TSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFG 721 (983)
Q Consensus 642 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~ 721 (983)
++|++|++++...+++++.+++++++++||++||+|+|. ++|+++|++||+++ +++.||+|+|++|++++|++ +
T Consensus 136 ~~v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~~----~~d~~~v~avR~~~-~~~~l~vDaN~~~~~~~A~~-~ 209 (388)
T 3qld_A 136 DRVEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIAP----GRDRAAIKAVRLRY-PDLAIAADANGSYRPEDAPV-L 209 (388)
T ss_dssp SEEEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECBT----TBSHHHHHHHHHHC-TTSEEEEECTTCCCGGGHHH-H
T ss_pred CeEEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeCc----HHHHHHHHHHHHHC-CCCeEEEECCCCCChHHHHH-H
Confidence 789999988654569999999999999999999999974 57999999999999 89999999999999999997 8
Q ss_pred hhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHH
Q 041113 722 FLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIA 798 (983)
Q Consensus 722 ~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~ 798 (983)
+.|+++++.|||||++ |++++++|++++++|||+||++++..+ +..+++. .+|++|+|++++|||+++++++
T Consensus 210 ~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~~~~a~d~v~~k~~~~GGit~~~~ia 284 (388)
T 3qld_A 210 RQLDAYDLQFIEQPLPEDDWFDLAKLQASLRTPVCLDESVRSVRE-----LKLTARLGAARVLNVKPGRLGGFGATLRAL 284 (388)
T ss_dssp HHGGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEESTTCCSHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHhhCCCcEEECCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEEECchhhCCHHHHHHHH
Confidence 9999999999999998 788999999999999999999999753 5666654 4799999999999999999999
Q ss_pred HHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCcc-chhcccccCCCCCc-eeec----
Q 041113 799 RWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLG-TYQWLKEDVTTDPI-SICH---- 872 (983)
Q Consensus 799 ~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~d~~~~p~-~~~~---- 872 (983)
++|+++|++++++|++|++|++++++|+++ ++|. ..+.+++ +..++.+|++.+|+ .+++
T Consensus 285 ~~A~~~gi~~~~~~~~es~i~~aa~~~laa-~~~~--------------~~~~~~~~~~~~~~~d~~~~~~~~~~~G~i~ 349 (388)
T 3qld_A 285 DVAGEAGMAAWVGGMYETGVGRVHGLIAAA-LPLM--------------RYATDLGPSDRYFEQDVLKEPIAFVEPGVIQ 349 (388)
T ss_dssp HHHHHTTCEEEECCCCCCHHHHHHHHHHHT-STTB--------------CSCBSCCCGGGTCSSCSBSSCCCCSBTTEEE
T ss_pred HHHHHCCCeEEecCccchHHHHHHHHHHHc-CCCC--------------CcccccCcchhhHHhhcccCCCceeECCEEE
Confidence 999999999999999999999999999998 7753 1112222 35678889988888 7874
Q ss_pred cCCCCeeeEEecchhhhhhhccccccccccc
Q 041113 873 NSCRGFVEASVAKATHILQNLQINNDVICKT 903 (983)
Q Consensus 873 ~P~~pGlGv~~d~a~~~~~~~~~~~~~i~~~ 903 (983)
+|++|||||++| ++.++++.+....+...
T Consensus 350 ~p~~PGlGv~~d--~~~l~~~~~~~~~~~~~ 378 (388)
T 3qld_A 350 VPQCAGVADWVD--RDAVRRFSTATWSVDLR 378 (388)
T ss_dssp CCCCSSSGGGBC--HHHHHHHEEEEEEEETT
T ss_pred CCCCCcCCceeC--HHHHHHhhcceEEEecc
Confidence 999999999999 88999988776555444
No 20
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=7.5e-61 Score=541.30 Aligned_cols=356 Identities=18% Similarity=0.197 Sum_probs=305.3
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+++ ..++.++|+|+ ++|++||||+.+.+ |+.++.+.+...++. +.|.+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~-d~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~l 75 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTV----HQQSYVIVRVY-SEGLVGVGEGGSVGGPVWSAECAETIKIIVERYLAPHL 75 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSC----CCCCCEECCBC-SSSCBCCEECCCBTTBTTSSCCHHHHHHHHHHHTHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEE----eeeeEEEEEEE-ECCcEEEEccccCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 69999999999999999999998765 34889999999 99999999998752 456777777777754 88999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..+ ++.+ ..+++|++|||||||||+||.+|+|||+||||.. +++|++|+
T Consensus 76 ~G~d~~~~~~~~~~l-----~~~~-----~g~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~---------r~~v~~~~ 136 (370)
T 1chr_A 76 LGTDAFNVSGALQTM-----ARAV-----TGNASAKAAVEMALLDLKARALGVSIAELLGGPL---------RSAIPIAW 136 (370)
T ss_dssp TTSCTTCHHHHHHHH-----HHHC-----SSCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSEEEBEE
T ss_pred cCCCcCCHHHHHHHH-----HHHh-----cCcHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC---------CCceeEEE
Confidence 999998876655322 2221 1247899999999999999999999999999986 57899998
Q ss_pred eecCCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 649 LIDSNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
++. ..++++..+++.++++ +||++||+|+|. .++++|++++++||+++|+++.|++|+|++|+.++|+++++.|+++
T Consensus 137 t~~-~~~~~~~~~~~~~~~~~~G~~~~KiKvg~-~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 214 (370)
T 1chr_A 137 TLA-SGDTKRDLDSAVEMIERRRHNRFKVKLGF-RSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEAL 214 (370)
T ss_dssp EEC-SSSHHHHHHHHHHHHHTTCCCEEEEECSS-SCSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTT
T ss_pred Eec-CCCcHHHHHHHHHHHHHCCCCEEEEecCC-CCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 874 3466666677777766 899999999997 3789999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++++++|++++++||++||++++.. .+..+++. ++|++|+|++++||++++++++++|+++
T Consensus 215 ~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~-----~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~ 289 (370)
T 1chr_A 215 GVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLA-----SAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEAS 289 (370)
T ss_dssp TEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHH-----HHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHH-----HHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHc
Confidence 9999999998 67889999999999999999999875 36666665 4799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++++||+++++|++++++|++++++|+. ..+.+++..++.+|++.+|+.+++ +|++||||
T Consensus 290 g~~~~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlG 355 (370)
T 1chr_A 290 GIASYGGTMLDSTIGTSVALQLYSTVPSLP--------------FGCELIGPFVLADTLSHEPLEIRDYELQVPTGVGHG 355 (370)
T ss_dssp TCEEEECCSCCTTHHHHHHHHHHTTSSCCT--------------TCBCCCTGGGSSCCSBSSCCEEETTEEECCCCSBTS
T ss_pred CCeEEecCCCccHHHHHHHHHHHHhCCCCc--------------cchhcccchhhhhcccCCCceeECCEEECCCCCcCC
Confidence 999999999999999999999999998641 112234456678899888998884 99999999
Q ss_pred EEecchhhhhhhccc
Q 041113 881 ASVAKATHILQNLQI 895 (983)
Q Consensus 881 v~~d~a~~~~~~~~~ 895 (983)
+++| ++.+++++.
T Consensus 356 v~~d--~~~l~~~~~ 368 (370)
T 1chr_A 356 MTLD--EDKVRQYAR 368 (370)
T ss_dssp CCBC--HHHHHHTCS
T ss_pred cccC--HHHHHhhhc
Confidence 9999 888888763
No 21
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=1.1e-59 Score=532.28 Aligned_cols=347 Identities=19% Similarity=0.195 Sum_probs=294.9
Q ss_pred eeEeEEEEEEEEeeC-CCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC--cCcccHHHHHHHHHHHHhHhc
Q 041113 493 CKICRMEYSLYRIQL-CAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE--IHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 493 mkI~~v~~~~~~~pl-~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~--~~~~~~~~~~~~l~~~~~~l~ 569 (983)
|||++|+++.+++|+ +.||.++.++. +.++.++|||+||+|++||||++|.. +..+....+...++.+.+.++
T Consensus 10 MKI~~I~~~~~~lPl~~~p~~~a~g~~----~~~~~~lV~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 85 (376)
T 4h2h_A 10 LKIAEIQLFQHDLPVVNGPYRIASGDV----WSLTTTIVKIIAEDGTIGWGETCPVGPTYAEAHAGGALAALEVLASGLA 85 (376)
T ss_dssp CBEEEEEEEEEEEEBTTCCBCCTTCCB----SEEEEEEEEEEETTSCEEEEEECCSSSSSSSCCHHHHHHHHHHHHHTTT
T ss_pred eEEeEEEEEEEecccCCCCeEecCEEE----EEEEEEEEEEEECCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHhc
Confidence 699999999999998 56999998765 45999999999999999999998764 333444556667788999999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.++.... .+.... ..+++|++|||+|||||+||.+|+|||+||||.. +++|++|++
T Consensus 86 g~d~~~~~~~~------~~~~~~-----~~~~~A~said~ALwDl~gK~~g~Pl~~LLGG~~---------r~~v~~y~s 145 (376)
T 4h2h_A 86 GAEALPLPLHT------RMDSLL-----CGHNYAKSALDIAVHDLWGKRLGVPVHELLGGAL---------TDSVSSYYS 145 (376)
T ss_dssp TCBSSHHHHHH------HHHHHC-----SCCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSEEECEEE
T ss_pred CCccCcHHHHH------HHHHhh-----cccHHHHHHHHHhhhHHHHHhcCCCceecCCCCc---------CCceeEeee
Confidence 99887542111 111111 1246899999999999999999999999999986 688999999
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHc-CCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKV-GHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~-g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+ +..+++++.+++++++++||++||+|+|. .++++|+++++++|+++ |+++.||+|+|++||+++|+++++.|++++
T Consensus 146 ~-~~~~~~~~~~~a~~~~~~G~~~~KiKvg~-~~~~~di~~v~~vr~a~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 223 (376)
T 4h2h_A 146 L-GVMEPDEAARQALEKQREGYSRLQVKLGA-RPIEIDIEAIRKVWEAVRGTGIALAADGNRGWTTRDALRFSRECPDIP 223 (376)
T ss_dssp E-CSCCHHHHHHHHHHHHHHTCSEEEEECCS-SCHHHHHHHHHHHHHHHTTSCCEEEEECTTCCCHHHHHHHHHHCTTSC
T ss_pred c-ccCCHHHHHHHHHHHHhcCceEEEEecCC-CCHHHHHHHHHHHHhhccCCeeEEEEeeccCCCHHHHHHHHHHHhhcc
Confidence 8 45789999999999999999999999997 36799999999999998 899999999999999999999999999998
Q ss_pred CceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 729 LQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 729 i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
+ |||||+++++++++|++.+++||++||++++..+ +..+++.+ +|++|+|++++||++++++++++|+++|++
T Consensus 224 ~-~iEeP~~~~~~~~~l~~~~~~pia~dE~~~~~~~-----~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~ 297 (376)
T 4h2h_A 224 F-VMEQPCNSFEDLEAIRPLCHHALYMDEDGTSLNT-----VITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLP 297 (376)
T ss_dssp E-EEESCSSSHHHHHHHGGGCCSCEEESTTCCSHHH-----HHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCC
T ss_pred c-cccCCcchhhhHhhhhhcccCccccCcccCCHHH-----HHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCC
Confidence 7 9999998789999999999999999999999763 55666554 699999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEe
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASV 883 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~ 883 (983)
+++||+++++|+.++++|++++.++. .. +. ..+....++.+++..+++.+++ +|++|||||++
T Consensus 298 ~~~~~~~~~~i~~aa~~hlaa~~~~~--~~----~~-------~~~~~~~~~~~~~~~~~~~~~~G~i~vp~~PGLGvel 364 (376)
T 4h2h_A 298 HTCDDAWGGDIVSAACTHIASTVLPR--LM----EG-------AWLAQPYVAEHYDAENGVRIEGGRIRVPQGPGLGLTI 364 (376)
T ss_dssp EECBCSSCSHHHHHHHHHHHTTSCGG--GE----EE-------CCCSGGGBSCCSSTTTCCCEETTEEECCCSSBTSCCC
T ss_pred EEeCCCCccHHHHHHHHHHHHhCCcc--cc----cc-------ccccCchhhhhhccCCCCeEECCEEECCCCCCCCcEE
Confidence 99999999999999999999987632 11 01 1123344556677788998884 99999999999
Q ss_pred c
Q 041113 884 A 884 (983)
Q Consensus 884 d 884 (983)
|
T Consensus 365 d 365 (376)
T 4h2h_A 365 D 365 (376)
T ss_dssp C
T ss_pred C
Confidence 9
No 22
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=1.2e-59 Score=527.71 Aligned_cols=339 Identities=20% Similarity=0.244 Sum_probs=299.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHH---hHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLL---HFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~---~~l 568 (983)
|||++|+++.+++||+.||.++.++. ..++.++|+|+|++|++||||+.+.+ +++++...+...++.+. |.|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~ge~~~~~~~~i~~l~~~~p~l 76 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTI----ESADSAIVEIETEEGLVGYGEGGPGIFITGETLAGTLETIELFGQAIIGL 76 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHHHTTSTTC
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEE----eeceEEEEEEEECCCCEEEEeecCCCCcCCCCHHHHHHHHHHHhhcCccc
Confidence 79999999999999999999998764 45899999999999999999998875 35677777777777888 999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++. .+. ..+++|++|||+|||||+||.+|+|||+||||. +++|++|+
T Consensus 77 ~G~d~~~~~~~~~---------~l~----~~~~~A~~aid~AlwDl~gk~~g~Pl~~llGg~----------~~~v~~~~ 133 (354)
T 3jva_A 77 NPFNIEKIHEVMD---------KIS----AFAPAAKAAIDIACYDLMGQKAQLPLYQLLGGY----------DNQVITDI 133 (354)
T ss_dssp CTTCHHHHHHHHH---------HHC----SSCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCS----------CSEEECCE
T ss_pred cCCCcccHHHHHH---------HHh----cccHHHHHHHHHHHHHHHHHHcCCcHHHHhhcc----------CCeeeeeE
Confidence 9999887655442 221 125789999999999999999999999999994 36788887
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
++ +..+++++.+++++++++||++||+|+|. ++++|++++++||+++|+++.|++|+|++|++++|+++++.|++++
T Consensus 134 ~~-~~~~~~~~~~~a~~~~~~G~~~~K~K~g~--~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 134 TL-GIDEPNVMAQKAVEKVKLGFDTLKIKVGT--GIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQ 210 (354)
T ss_dssp EE-CSCCHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSC
T ss_pred Ee-CCCCHHHHHHHHHHHHHhCCCeEEEEeCC--CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 76 45789999999999999999999999997 6799999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++++|++++||++++++++++|+++|
T Consensus 211 i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 285 (354)
T 3jva_A 211 IELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQD-----ALELVKKGTVDVINIKLMKCGGIHEALKINQICETAG 285 (354)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTT
T ss_pred CCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHH-----HHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcC
Confidence 999999998 788999999999999999999998753 555554 457999999999999999999999999999
Q ss_pred CcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCC-Cee
Q 041113 806 KMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCR-GFV 879 (983)
Q Consensus 806 i~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~-pGl 879 (983)
+++++||++ ||++++++++||++++||+.. +.++++.++.+|++.+++.+++ +|++ |||
T Consensus 286 i~~~~~~~~~es~i~~~a~~hlaaa~~~~~~---------------~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~~PGl 350 (354)
T 3jva_A 286 IECMIGCMAEETTIGITAAAHLAAAQKNITR---------------ADLDATFGLETAPVTGGVSLEAKPLLELGEAAGL 350 (354)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHCTTEEE---------------ECCCGGGGBSSCSSSBSSCSSCCSEEECCSSSBT
T ss_pred CeEEecCCCcccHHHHHHHHHHHhcCCCCCc---------------ccccchhhhhhccccCCceEECCEEEcCCCCCCC
Confidence 999999999 999999999999999996421 2345567888899888888874 9999 999
Q ss_pred eE
Q 041113 880 EA 881 (983)
Q Consensus 880 Gv 881 (983)
||
T Consensus 351 Gv 352 (354)
T 3jva_A 351 GI 352 (354)
T ss_dssp CB
T ss_pred CC
Confidence 98
No 23
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=3.3e-59 Score=529.90 Aligned_cols=363 Identities=17% Similarity=0.174 Sum_probs=304.8
Q ss_pred eeEeEEEEEEEEeeCCC--CCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCA--PPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~--p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g 570 (983)
|||++|+++.+++||+. ||.++.+++ ..++.++|||+|++|++||||+.+ ++ ++.+.+...++.+.|.|+|
T Consensus 3 MkI~~i~~~~~~~pl~~~~p~~~a~~~~----~~~~~~~V~v~td~G~~G~GE~~~-~~--~~~~~~~~~i~~l~p~l~G 75 (389)
T 3ozy_A 3 LKITEVKAHALSTPIPERMRVESGAGLK----LNRQMILVEVRTDEGVTGVGSPSG-PY--DLAVLKRAIEDVIGPQLIG 75 (389)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEB----CEEEEEEEEEEETTSCCEEECCCS-SS--CHHHHHHHHHHTTHHHHTT
T ss_pred CEEEEEEEEEEeccCcCCCccccccccc----ccceEEEEEEEECCCCEEEEecCC-CC--CchHHHHHHHHHHHHHHcC
Confidence 89999999999999999 999998764 348999999999999999999984 22 1223344556779999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce-eEEEEe
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS-IKICAL 649 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~-i~~~~~ 649 (983)
+++.+++.++..+.....+...+ ..+..++|++|||+|||||+||.+|+|||+||||.. +++ ||+|++
T Consensus 76 ~d~~~~~~~~~~l~~~~~~~~~g--~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLGg~~---------r~~~v~~y~~ 144 (389)
T 3ozy_A 76 EDPANINYLWHKVFHGEVSRNLG--HRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLGGKF---------HTRGVRAYAS 144 (389)
T ss_dssp SCTTCHHHHHHHHHHHTHHHHHC--SBSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCS---------STTCEEEEEE
T ss_pred CCcchHHHHHHHHHhhhhhhccC--CchHHHHHHHHHHHHHHHHhHhHcCCCHHHHhCCcc---------cCCceeeEEe
Confidence 99988766664332210011122 234578999999999999999999999999999985 478 999998
Q ss_pred e-cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 I-DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~-~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+ ....+++++.+++++++++||++||+|+|. ++++|+++|++||+++|+++.|++|+|++|+.++|+++++.|++++
T Consensus 145 ~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~--~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 145 SIYWDLTPDQAADELAGWVEQGFTAAKLKVGR--APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC--CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 7 326789999999999999999999999997 7999999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHH-hhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 729 LQYIEEPVQ--NEEDIIKYC-EESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~-~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
+.|||||++ +++++++|+ +++++||++||++.+..+ +..+++ ..+|++++|++++||++++++++++|+++
T Consensus 223 i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~-----~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~ 297 (389)
T 3ozy_A 223 CYWFEEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNA-----FNDYIRNDAIDVLQADASRAGGITEALAISASAASA 297 (389)
T ss_dssp CSEEESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHH-----HHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHT
T ss_pred CCEEECCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 999999998 788999999 999999999999998753 556665 45799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++++| +++++|++++++||+++++|.. +.+++ ... ..|.+|++.+|+.+++ +|++||||
T Consensus 298 gi~~~~h-~~~~~i~~aa~~hlaaa~~~~~-----~~e~d--------~~~-~~~~~~~~~~~~~~~~G~i~~p~~PGlG 362 (389)
T 3ozy_A 298 HLAWNPH-TFNDIITVAANLHLVAASPHPA-----MFEWD--------ITH-NDLMTRLASYDLKLENGLVQPPQGPGLG 362 (389)
T ss_dssp TCEECCC-CTTSHHHHHHHHHHHHHCCSCC-----CEEEE--------CSS-CGGGTTSBSCCCCCBTTEECCCCSSBTC
T ss_pred CCEEEec-CCCcHHHHHHHHHHHHhCCCCe-----eEEec--------Ccc-chhhHhhccCCceeECCEEECCCCCcCC
Confidence 9998766 5799999999999999999641 11121 111 2345677788888874 99999999
Q ss_pred EEecchhhhhhhccccc
Q 041113 881 ASVAKATHILQNLQINN 897 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~ 897 (983)
|++| ++.++++....
T Consensus 363 v~~d--~~~l~~~~~~~ 377 (389)
T 3ozy_A 363 FEID--WDFVAAHAWKG 377 (389)
T ss_dssp SCBC--HHHHHHTBCCS
T ss_pred cccC--HHHHHhccCCC
Confidence 9999 88999988664
No 24
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=8.1e-60 Score=535.64 Aligned_cols=357 Identities=22% Similarity=0.213 Sum_probs=302.4
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+.+ ..++.++|+|+| +|++||||+.+.+ +++++...+...++. +.|.|
T Consensus 7 MkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~lV~v~t-~G~~G~GE~~~~~~p~~~~et~~~~~~~i~~~l~p~l 81 (400)
T 3mwc_A 7 ARIDGVSLYEIVIPMKIPFQISSGTC----YTRRSLVVEIRE-GDLFGYGESAPFEEPFYLGETLETTKVILKNHLLPMI 81 (400)
T ss_dssp CCCCEEEEEEEEEECSSCCCBTTBCC----CEEEEEEEEEEE-TTEEEEEEECCBSSTTSTTCBHHHHHHHHHHTHHHHH
T ss_pred cEEEEEEEEEEeccccCceEccCceE----eeeeEEEEEEEE-CCeEEEEecccCCCCccccCcHHHHHHHHHHHHHHHH
Confidence 79999999999999999999998765 458999999999 9999999998763 567787777777764 88999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCC------------CCccccc
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYP------------LTEIDEE 636 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg------------~~~~~~~ 636 (983)
+|+++.+++.++.. +... + ...++|++|||+|||||+||.+|+|||+|||| ..
T Consensus 82 iG~d~~~~e~~~~~-----l~~~--~---~g~~~A~said~ALwDl~gk~~g~Pl~~LLGG~~~~~~~~~~~~~~----- 146 (400)
T 3mwc_A 82 LGKEPLSIEEFNHL-----IKNG--I---RGNHFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLAS----- 146 (400)
T ss_dssp TTCCCSSHHHHHHH-----HHHS--C---CSCHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHTTCCGGGGCB-----
T ss_pred cCCCCCCHHHHHHH-----HHHH--h---cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhCCcccccccccccccC-----
Confidence 99998876655432 1111 1 12467999999999999999999999999996 33
Q ss_pred cccccceeEEEEeecCCCC--HHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 041113 637 ISKRSTSIKICALIDSNKS--PVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTY 714 (983)
Q Consensus 637 ~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~ 714 (983)
+++|++|++++...+ ++++++++++++++||++||+|++ +++|+++|++||+++|+++.|++|+|++|+.
T Consensus 147 ----r~~v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~----~~~d~~~v~avR~a~G~~~~L~vDaN~~w~~ 218 (400)
T 3mwc_A 147 ----NNYIESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK----PGWDVEPLQETRRAVGDHFPLWTDANSSFEL 218 (400)
T ss_dssp ----CSEEEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB----TTBSHHHHHHHHHHHCTTSCEEEECTTCCCG
T ss_pred ----CCeEEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC----cchHHHHHHHHHHhcCCCCEEEEeCCCCCCH
Confidence 578999998753445 999999999999999999999995 4679999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCH
Q 041113 715 QEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGF 791 (983)
Q Consensus 715 ~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl 791 (983)
++ +++++.|+++++.|||||++ +++++++|++++++||++||++++..+ +..+++. .+|++|+|++++||+
T Consensus 219 ~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~~~~~~~d~v~~k~~~~GGi 292 (400)
T 3mwc_A 219 DQ-WETFKAMDAAKCLFHEQPLHYEALLDLKELGERIETPICLDESLISSRV-----AEFVAKLGISNIWNIKIQRVGGL 292 (400)
T ss_dssp GG-HHHHHHHGGGCCSCEESCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHH-----HHHHHHTTCCSEEEECHHHHTSH
T ss_pred HH-HHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHH-----HHHHHhcCCCCEEEEcchhhCCH
Confidence 99 99999999999999999998 788999999999999999999999753 6666654 479999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccc--cCCCCCc
Q 041113 792 ENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKE--DVTTDPI 868 (983)
Q Consensus 792 ~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~--d~~~~p~ 868 (983)
+++++++++|+++|+++++++|+|++|++++++|||+ ++|.. ....++. ..||.+ |++. +
T Consensus 293 t~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hlaa-~~~~~--------------~~~d~~~~~~~~~~~~d~~~--~ 355 (400)
T 3mwc_A 293 LEAIKIYKIATDNGIKLWGGTMPESGLGARFLISLAS-FRGFV--------------FPADVAASEKWYGKGNDLVE--N 355 (400)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCCHHHHHHHHHHTT-BTTBC--------------SCBCCCCHHHHHCTTTSSSC--C
T ss_pred HHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHHHc-CCCCc--------------ceeccCchhhhhhcccCeeE--E
Confidence 9999999999999999999999999999999999988 87531 1112222 346676 8776 6
Q ss_pred eeec----cCCCCeeeEEecchhhhhhhcccccccccc
Q 041113 869 SICH----NSCRGFVEASVAKATHILQNLQINNDVICK 902 (983)
Q Consensus 869 ~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~~~i~~ 902 (983)
.+++ +|++|||||++| ++.++++.++...+.+
T Consensus 356 ~~~~G~i~~p~~PGlGve~d--~~~l~~~~~~~~~~~~ 391 (400)
T 3mwc_A 356 TMTDGKIYVPDEPGASFDMT--LSHLEALGKKIWESQR 391 (400)
T ss_dssp CEETTEEECCCSBTTTTTCC--HHHHHHHEEEEEEEC-
T ss_pred EEECCEEECCCCCCcCcccC--HHHHHhhccccEEecc
Confidence 6663 999999999999 8888888876654433
No 25
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=1.6e-58 Score=524.55 Aligned_cols=350 Identities=18% Similarity=0.216 Sum_probs=299.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc---C-cCcccHHHHHHHHHHHHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL---E-IHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~---~-~~~~~~~~~~~~l~~~~~~l 568 (983)
|||++|+++.+++|++.||.+ +.++|||+|++|++||||+.+. + +..++. ...+.+.|.|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~------------~~~~V~v~td~G~~G~GE~~~~~~~p~~~~e~~----~i~~~l~p~l 64 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVN------------KHVIVKIHTDEGLTGIGEMSDFSHLPLYSVDLH----DLKQGLLSIL 64 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEE------------EEEEEEEEETTSCEEEEEECCCSSSSSCCCCHH----HHHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCccc------------ceEEEEEEECCCCEEEeccccccCCCccchhHH----HHHHHHHHHh
Confidence 799999999999999998743 5789999999999999999876 3 345554 2224688999
Q ss_pred ccCcccccccccccCchhhhhhhcC--CCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLG--IPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
+|+++.+++.++..+. +.+. .......++|++|||||||||+||.+|+|||+||||.. +++|++
T Consensus 65 iG~d~~~~~~~~~~l~-----~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~---------r~~v~~ 130 (391)
T 3gd6_A 65 LGQNPFDLMKINKELT-----DNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLGGRV---------KEKIKV 130 (391)
T ss_dssp TTCCTTCHHHHHHHHH-----HHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSEEEB
T ss_pred CCCCccCHHHHHHHHH-----HHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhCCCc---------CCeEEe
Confidence 9999988766654321 1111 00112367899999999999999999999999999975 578999
Q ss_pred EEeecC---CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEE-EEcCCCCCHHHHHHHHh
Q 041113 647 CALIDS---NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELR-VDANRNWTYQEALEFGF 722 (983)
Q Consensus 647 ~~~~~~---~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~-vDaN~~~~~~~a~~~~~ 722 (983)
|+++.. ..+++++++++++++++||++||+|+|. ++++|+++|++||+++|+++.|+ +|+|++|++++|+++++
T Consensus 131 y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~--~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~ 208 (391)
T 3gd6_A 131 CYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK--NLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIK 208 (391)
T ss_dssp CEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS--CHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHH
T ss_pred eEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC--CHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHH
Confidence 998741 5689999999999999999999999997 79999999999999999999999 99999999999999999
Q ss_pred hcccCCC--ceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHH
Q 041113 723 LIKDCDL--QYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLI 797 (983)
Q Consensus 723 ~l~~~~i--~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~ 797 (983)
.|+++++ .|||||++ +++++++|++++++|| ||++.+..+ +..+++ ..+|++|+|++++||+++++++
T Consensus 209 ~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~iPI--dE~~~~~~~-----~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 209 RLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDYPI--SEHVWSFKQ-----QQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSSCE--EEECCCHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHhcCCCcceecCCCChhhHHHHHHHHHHcCCCc--CCCCCCHHH-----HHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 9999999 99999998 7889999999999999 999998753 555554 4579999999999999999999
Q ss_pred HHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----c
Q 041113 798 ARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----N 873 (983)
Q Consensus 798 ~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~ 873 (983)
+++|+++|+++++|||+|++|++++++||+++++|+ ..++.+++..++.+|++.+|+.+++ +
T Consensus 282 a~~A~~~gi~~~~~~~~es~i~~aa~~hlaaa~~~~--------------~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~ 347 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELSVGTAAMAHLGCSLTNI--------------NHTSDPTGPELYVGDVVKNRVTYKDGYLYA 347 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCHHHHHHHHHHHTTCSSC--------------CSCBCCCGGGGBSCCSBSSCCCEETTEEEC
T ss_pred HHHHHHcCCEEEecCCCccHHHHHHHHHHHHhCCCC--------------CccccccchhhhhhccccCCceeECCEEEe
Confidence 999999999999999999999999999999999864 1123345566788899888998884 9
Q ss_pred CC--CCeeeEEecchhhhhhhccccc
Q 041113 874 SC--RGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 874 P~--~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
|+ +|||||++| ++.++++.+..
T Consensus 348 p~~~~PGlGv~~d--~~~l~~~~~~~ 371 (391)
T 3gd6_A 348 PDRSVKGLGIELD--ESLLAKYQVPD 371 (391)
T ss_dssp CCTTSSBTSCCBC--HHHHHHTBCSC
T ss_pred CCCCCCCCCcccC--HHHHHhccccc
Confidence 99 999999999 88899988764
No 26
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=4.2e-59 Score=528.85 Aligned_cols=358 Identities=15% Similarity=0.118 Sum_probs=280.2
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHH-HHHHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQL-RFLLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l-~~~~~~l~g 570 (983)
.|||++|+++.+++||+.||.++.+++ ..++.++|||+||+|++||||+.+.. ++...+...+ +.++|.|+|
T Consensus 19 ~MkIt~Ie~~~~~~Pl~~p~~~s~g~~----~~~~~vlV~i~td~G~~G~Ge~~~~~---~~~~~~~~~i~~~lap~LiG 91 (388)
T 4h83_A 19 GLTITRIETIPMVAPLAREFRGSHYHM----THRATIVTRVHTDAGIIGEAYTGDEH---ETMFDIDRIIHEELAPTLIG 91 (388)
T ss_dssp -CBEEEEEEEEEEEEC----------C----CEEEEEEEEEEETTSCEEEEEECCCC---TTHHHHHHHHHHTTHHHHTT
T ss_pred CCEEEEEEEEEEEeeccCCEECCCEEE----EEEEEEEEEEEECCCCEEEEEecCCc---ccHHHHHHHHHHHHHHHHcC
Confidence 369999999999999999999999865 45999999999999999999997653 3333344444 458899999
Q ss_pred CcccccccccccCchhhhhhhcC-CCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLG-IPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
+++.+++.++..++.. ... ........+|++|||+|||||+||.+|+|||+||||.+ +++++|++
T Consensus 92 ~dp~~ie~l~~~~~~~----~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLGg~~----------~~~~~y~~ 157 (388)
T 4h83_A 92 QDAMAIERLWDSGYKV----TFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYR----------NELPMIAI 157 (388)
T ss_dssp SBTTCHHHHHHHHGGG----GCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSC----------SEEEEEEE
T ss_pred CChhHHHHHHHHHHhh----hhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcCCCc----------CceEEEee
Confidence 9998877666432211 111 11223467899999999999999999999999999975 67888887
Q ss_pred ecC-CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 IDS-NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~~~-~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
... ..+++++.++++++++.||++||+|+|. .++++|+++|+++|+++|+++.||||+|++||+++|+++++.|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~-~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 236 (388)
T 4h83_A 158 GGYYGEPLGSIADEMHNYQELGLAGVKFKVGG-LSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLN 236 (388)
T ss_dssp ECCTTCTTCSHHHHHHHHHHHTBSEEEEECSS-SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHTTTSC
T ss_pred ccccCCCHHHHHHHHHHHHHcCCceEeecCCC-CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHHHHHHHhhhcC
Confidence 533 3456788899999999999999999976 48999999999999999999999999999999999999999999999
Q ss_pred CceeecCCC---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 729 LQYIEEPVQ---NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 729 i~~iEeP~~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
+.|||||++ +.+.+++|++++++|||+||++++..+ +..+++. .+|++|+|++++||||++++++++|+++
T Consensus 237 ~~~iEeP~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~ 311 (388)
T 4h83_A 237 IRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASG-----CRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSY 311 (388)
T ss_dssp CCCEESCBCSTTHHHHHHHHHHHSSSCEEECTTCSSHHH-----HHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHT
T ss_pred cceeecCcccccchHHHHHHHhhcCCCccCCccccChHh-----HHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHC
Confidence 999999996 356789999999999999999999764 6666654 4799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++ +++.++ ++++|++++++|.. . .+. + ..+ ...+..|++.+++.+++ +|++||||
T Consensus 312 gv~v--~~h~~~----~~~~h~~aa~~~~~--~---~e~-~------~~~-~~~~~~~~~~~~~~~~~G~i~~p~~PGLG 372 (388)
T 4h83_A 312 DVQM--GHHEEP----QVSTHLLASQPHGT--I---AEC-F------HPD-RDPFWWNMITNRPKLNNGTLTLSDRPGLG 372 (388)
T ss_dssp TCEE--CCCSCH----HHHHHHHHHSTTBC--C---EEE-E------CTT-TCHHHHHSBTTCCCCBTBEEECCSCSBTC
T ss_pred CCEE--EecCHH----HHHHHHHHHhhcCc--c---eee-c------Ccc-cchhhhhccCCCCeeECCEEECCCCCCCC
Confidence 9974 333454 45689999998642 1 111 0 011 12234466677888874 99999999
Q ss_pred EEecchhhhhhhccccc
Q 041113 881 ASVAKATHILQNLQINN 897 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~ 897 (983)
|++| ++.+++|+++.
T Consensus 373 ve~d--~d~l~~y~V~~ 387 (388)
T 4h83_A 373 WDLN--WDYIDQYRVSK 387 (388)
T ss_dssp CCBC--HHHHHHHBC--
T ss_pred eeeC--HHHHHhccCCC
Confidence 9999 99999999875
No 27
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=5.9e-58 Score=523.55 Aligned_cols=353 Identities=18% Similarity=0.231 Sum_probs=290.7
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
+|||++|+++.+++| ..|+.++.+.+. .....++|+|+||+|++||||+... + .+...++.+.|.|+|+
T Consensus 22 ~mkI~~i~~~~v~~P-~~~~~~~~g~~~---~~~~~~~V~v~td~G~~G~GE~~g~----~---~v~~~i~~l~p~LiG~ 90 (441)
T 3vc5_A 22 SMLIREVRVTPVAFR-DPPLLNAAGVHQ---PWALRTIVEVVTDEGITGLGETYGD----L---AHLEQVRAAAARLPGL 90 (441)
T ss_dssp -CBEEEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEEETTCCEEEEEEECC----H---HHHHHHHHHHHTCTTS
T ss_pred CcEEEEEEEEEEecC-CcccccccCccc---cceeEEEEEEEECCCCEEEEeCCCh----H---HHHHHHHHHHHHhCCC
Confidence 479999999999999 889988887642 1256799999999999999998632 2 2345567899999999
Q ss_pred cccccccccccCchhhhhhhcCCC-------CCc------chhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccc
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIP-------ACE------IFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEIS 638 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~ 638 (983)
++.+++.++..+. +.+... ..+ ...+|++|||+|||||+||.+|+|||+||||..
T Consensus 91 d~~~~e~i~~~l~-----~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~------- 158 (441)
T 3vc5_A 91 DVYALHRIYRRVA-----DVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLGGKV------- 158 (441)
T ss_dssp BTTCHHHHHHHHH-----HHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS-------
T ss_pred ChhHHHHHHHHHH-----HhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC-------
Confidence 9988777664322 211100 011 345799999999999999999999999999976
Q ss_pred cccceeEEEEeec---------------CCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCc
Q 041113 639 KRSTSIKICALID---------------SNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRI 702 (983)
Q Consensus 639 ~~~~~i~~~~~~~---------------~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~ 702 (983)
+++|++|+++. ...++++++++++++++ +||++||+|+|. .++++|+++|++||+++ |++
T Consensus 159 --rd~v~~~a~~~~~~~~~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~-~~~~~Di~rv~avRea~-pd~ 234 (441)
T 3vc5_A 159 --RDAVPYSAYLFYKWAGHPGKPEDRFGPALDPDGIVAQARLLIGEYGFRSIKLKGGV-FPPEQEAEAIQALRDAF-PGL 234 (441)
T ss_dssp --SSEEEBCEEEECBCSBCTTSCBCTTCCBCSHHHHHHHHHHHHHHHCCSSEEEECSS-SCHHHHHHHHHHHHHHS-TTC
T ss_pred --CCeEEEEEeeccccccCCCccccccccCCCHHHHHHHHHHHHHhcCCCEEEEccCC-CCHHHHHHHHHHHHHhC-CCC
Confidence 57888865431 12689999999999987 599999999997 37899999999999999 999
Q ss_pred EEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEE
Q 041113 703 ELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAI 781 (983)
Q Consensus 703 ~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i 781 (983)
.||||+|++|++++|+++++.|+++ +.|||||+++.+++++|++++++|||+||++++..+ +..+++ ..+|++
T Consensus 235 ~L~vDaN~~w~~~~Ai~~~~~L~~~-l~~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~a~dii 308 (441)
T 3vc5_A 235 PLRLDPNAAWTVETSIRVGRALDGV-LEYLEDPTPGIDGMARVAAEVPMPLATNMCVVTPEH-----LPAAVERRPIGVL 308 (441)
T ss_dssp CEEEECTTCSCHHHHHHHHHHTTTT-CSEEECCSSSHHHHHHHHTTSSSCEEESSSCCSGGG-----HHHHHHHCCCSEE
T ss_pred cEeccCCCCCCHHHHHHHHHHHHHH-HHHhhccCCCHHHHHHHHhcCCCCEEeCCCCCCHHH-----HHHHHHhCCCCEE
Confidence 9999999999999999999999999 999999999999999999999999999999999875 555554 457999
Q ss_pred EEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccc-
Q 041113 782 VIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLK- 860 (983)
Q Consensus 782 ~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 860 (983)
|+|++++|||+++++++++|+++|+++++|++.+++|++++++||++++||+. + .+.+. ..|+.
T Consensus 309 ~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e~~i~~aa~~hlaaa~p~~~----------~----~~d~~-~~~~~~ 373 (441)
T 3vc5_A 309 LIDHHYWGGLVRSAHIATLCATFGIELSMHSNSHLGISLAAMTHLAAATPAIT----------H----ACDTH-TPWQDG 373 (441)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHHHHHTCTTBC----------S----CBCCC-GGGGTT
T ss_pred eechhhcCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCcc----------e----eeccc-chhhcc
Confidence 99999999999999999999999999999999999999999999999998641 1 11111 23443
Q ss_pred ccCC-CCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 861 EDVT-TDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 861 ~d~~-~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
+|++ .+|+.+++ +|++|||||++| ++.++++.
T Consensus 374 ~d~~~~~~~~~~~G~i~~p~~PGLGveld--~~~l~~~~ 410 (441)
T 3vc5_A 374 QDVVAPGALRFVDGAVPVPDGPGLGVELD--RDALAVMH 410 (441)
T ss_dssp CCSBCTTSCCCBTTEEECCCSSBTSCCBC--HHHHHHHH
T ss_pred cccccCCCceEECCEEECCCCCCCCceEC--HHHHHHHH
Confidence 4554 46888874 999999999999 77776654
No 28
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=2.2e-58 Score=522.03 Aligned_cols=356 Identities=20% Similarity=0.203 Sum_probs=290.4
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHH-HHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDA-EEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~-~~~l~~~~~~l~g~ 571 (983)
|||++|+++.+++| ||.+ + . ++.++|||+||+|++||||+.+ .++...+ ...++.+.|.|+|+
T Consensus 3 MkI~~i~~~~~~~p---~~~~----~----~-~~~~~V~v~td~G~~G~GE~~~----~~~~~~~~~~~~~~l~p~liG~ 66 (393)
T 4dwd_A 3 LKIAKVEALSVAMG---DGTG----W----M-PTSAFVRITAEDGTVGWGEASP----MLGGIASLGVVARDIAPFLEGQ 66 (393)
T ss_dssp CBEEEEEEEEEECC---C--------------CEEEEEEEEETTSCEEEEEECC----GGGGHHHHHHHHHHTHHHHTTS
T ss_pred CEEEEEEEEEEcCC---Cccc----c----c-ceEEEEEEEECCCCEEEEEccC----cHHHHHHHHHHHHHHHHHHCCC
Confidence 89999999999987 5543 2 3 7899999999999999999972 2333333 22356799999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
++.+++.++..++... ......+...+|++|||+|||||+||.+|+|||+||||.. +++||+|+++.
T Consensus 67 d~~~~e~~~~~l~~~~----~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg~~---------r~~v~~y~s~~ 133 (393)
T 4dwd_A 67 EVLDHAVLLDRMMHRL----VKLGPEGIATAALAACDIALWDLKGKLLGQPIYKLLGGAW---------RTRLPCYSSIG 133 (393)
T ss_dssp BGGGHHHHHHHHHHHT----GGGCCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSEEEEEEEEC
T ss_pred CcccHHHHHHHHHHHH----HhcCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCC---------CCceeeEEecC
Confidence 9988776664332110 1111234567999999999999999999999999999985 57899999862
Q ss_pred --CCCCHHHHHHHH-HHhhhcCCCEEEEeccCC-----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhh
Q 041113 652 --SNKSPVEVASIA-TTLVEEGFTAIKLKVARR-----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFL 723 (983)
Q Consensus 652 --~~~~~~~~~~~~-~~~~~~G~~~~KiKig~~-----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~ 723 (983)
...+++++++++ ++++++||++||+|+|.. .++++|+++|++||+++|+++.|+||+|++|++++|+++++.
T Consensus 134 g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~ 213 (393)
T 4dwd_A 134 GNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRA 213 (393)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHH
Confidence 247899999999 999999999999999861 168999999999999999999999999999999999999999
Q ss_pred cccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 724 IKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 724 l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++.++|++++|++++||++++++++++|
T Consensus 214 L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~d~v~~k~~~~GGit~~~~ia~~A 288 (393)
T 4dwd_A 214 LEDLGYSWFEEPVQHYHVGAMGEVAQRLDITVSAGEQTYTLQA-----LKDLILSGVRMVQPDIVKMGGITGMMQCAALA 288 (393)
T ss_dssp HHHTTCSEEECCSCTTCHHHHHHHHHHCSSEEEBCTTCCSHHH-----HHHHHHHTCCEECCCTTTTTHHHHHHHHHHHH
T ss_pred HHhhCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHH-----HHHHHHcCCCEEEeCccccCCHHHHHHHHHHH
Confidence 99999999999998 788999999999999999999998753 55555434999999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRG 877 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~p 877 (983)
+++|+++++|++ +++|++++++||++++||+. . +..+ ++.+. ...|++.+|+.+++ +|++|
T Consensus 289 ~~~gi~~~~h~~-~~~i~~aa~~hlaaa~p~~~--~----~~~~-------~e~~~-~~~~~~~~~~~~~~G~i~vp~~P 353 (393)
T 4dwd_A 289 HAHGVEFVPHQT-QPGVGHFANIHVLSTLMHMT--K----PVEL-------ADRWD-RGRPVFRNPAEPVDGHFALGDAP 353 (393)
T ss_dssp HHHTCEECCCCC-CSSHHHHHHHHHHHTCTTCC--S----CEEE-------CTTGG-GGTTTBSSCCCCBTTEEECCCCS
T ss_pred HHcCCEEeecCC-CcHHHHHHHHHHHHhCCCcc--c----ccce-------eEeec-CcccccCCCceeECCEEECCCCC
Confidence 999999887776 99999999999999999641 0 0000 01011 12367778888874 99999
Q ss_pred eeeEEecchhhhhhhccccccc
Q 041113 878 FVEASVAKATHILQNLQINNDV 899 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~~~~~ 899 (983)
|||+++| ++.++++.+....
T Consensus 354 GlGve~d--~~~l~~~~~~~~~ 373 (393)
T 4dwd_A 354 GLGIVVD--EDELASRATEITV 373 (393)
T ss_dssp BTCCCBC--HHHHHHHEEEECC
T ss_pred cCCCccC--HHHHHhccccccc
Confidence 9999999 8899998876443
No 29
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=1e-57 Score=521.52 Aligned_cols=357 Identities=18% Similarity=0.255 Sum_probs=291.4
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
+|||++|+++.+++| ..|+.++.+.+. ...+.++|+|+||+|++||||+.+. + .+...++.+.|.|+|+
T Consensus 27 ~mkIt~i~~~~v~~p-~~p~~~~~g~~~---~~~~~~~V~v~td~G~~G~GE~~g~----~---~~~~~i~~l~p~LiG~ 95 (445)
T 3vdg_A 27 RIRITGARVTPVAFA-DPPLLNTVGVHQ---PYALRAVIQLDTDAGLTGLGETYAD----T---VHLERLQAAAHAIVGR 95 (445)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEEETTSCEEEEEECCC----H---HHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEEEEEecC-Cccccccccccc---cceeEEEEEEEECCCCeEEEeCCCh----H---HHHHHHHHHHHHhCCC
Confidence 489999999999999 789988876542 1256799999999999999998532 2 2344567899999999
Q ss_pred cccccccccccCchhhhhh----hcCCCC----CcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce
Q 041113 572 KISYFLPLLKGSFSSWIWS----TLGIPA----CEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS 643 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~ 643 (983)
++.+++.++..+....... ..+..+ .....+|++|||+|||||+||.+|+|||+||||.. +++
T Consensus 96 d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~ 166 (445)
T 3vdg_A 96 SVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLGGAV---------RDA 166 (445)
T ss_dssp BTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCS---------SSE
T ss_pred ChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCe
Confidence 9998777664322110000 001000 01455799999999999999999999999999975 578
Q ss_pred eEEEEeec---------------CCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEE
Q 041113 644 IKICALID---------------SNKSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVD 707 (983)
Q Consensus 644 i~~~~~~~---------------~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vD 707 (983)
|++|+++. ...+++++++++++++++ ||++||+|+|. .++++|+++|++||+++ |++.||||
T Consensus 167 v~~~a~~~~~~~~~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~-~~~~~Di~~v~avRea~-~d~~L~vD 244 (445)
T 3vdg_A 167 VPFSAYLFYKWAAHPGAEPDGWGAALDPDGIVAQARRMIDEYGFSAIKLKGGV-FAPEEEMAAVEALRAAF-PDHPLRLD 244 (445)
T ss_dssp EEBCEEEECBCSSSTTSCCCSSCCBCSHHHHHHHHHHHHHHHCCSSEEEECSS-SCHHHHHHHHHHHHHHC-TTSCEEEE
T ss_pred EEEeeeecccccccCCccccccccCCCHHHHHHHHHHHHHhcCCCEEEECCCC-CCHHHHHHHHHHHHHhC-CCCcEEEE
Confidence 88865431 126899999999999874 99999999997 37899999999999999 99999999
Q ss_pred cCCCCCHHHHHHHHhhcccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCC
Q 041113 708 ANRNWTYQEALEFGFLIKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPS 786 (983)
Q Consensus 708 aN~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~ 786 (983)
+|++|++++|+++++.|+++ +.|||||+++++++++|++++++|||+||++.+..+ +..+++ ..+|++|+|++
T Consensus 245 aN~~w~~~~Ai~~~~~L~~~-l~~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~a~div~~d~~ 318 (445)
T 3vdg_A 245 PNAAWTPQTSVKVAAGLEGV-LEYLEDPTPGLDGMAEVAAQAPMPLATNMCVVAFDQ-----LPAAVAKNSVQVVLSDHH 318 (445)
T ss_dssp CTTCSCHHHHHHHHHHTTTT-CSEEECCSSSHHHHHHHHHHCSSCEEESSSCCSGGG-----HHHHHHHTCCSEEEECHH
T ss_pred CCCCCCHHHHHHHHHHHhhH-HHeeeCCCCCHHHHHHHHhcCCCCEEcCCcCCCHHH-----HHHHHHcCCCCEEeeCcc
Confidence 99999999999999999999 999999999999999999999999999999999875 555554 45799999999
Q ss_pred CcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccC-C
Q 041113 787 VIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDV-T 864 (983)
Q Consensus 787 ~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~-~ 864 (983)
++|||+++++++++|+++|+++++|++.+++|++++++||++++||+. .. ++. ..|+.+|. .
T Consensus 319 ~~GGitea~kia~lA~~~gv~v~~h~~~e~~i~~aa~~hlaaa~p~~~--------------~~--~d~~~~~~~~d~~~ 382 (445)
T 3vdg_A 319 YWGGLQRSRLLAGICDTFGLGLSMHSNSHLGISLAAMVHLAAATPNLT--------------YA--CDTHWPWRHEDVVA 382 (445)
T ss_dssp HHTSHHHHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHHHTCTTCC--------------SC--BCCCGGGCCCCSBC
T ss_pred eeCCHHHHHHHHHHHHHcCCEEEEeCCcchHHHHHHHHHHHHhCCCcc--------------ee--eccccchhhccccc
Confidence 999999999999999999999999999999999999999999998641 11 122 23444454 4
Q ss_pred CCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 865 TDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 865 ~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
.+|+.+++ +|++|||||++| ++.++++.
T Consensus 383 ~~~~~~~~G~i~~p~~PGLGveld--~~~l~~~~ 414 (445)
T 3vdg_A 383 PGALNFCDGEVQVPATPGLGVEID--EDALAALH 414 (445)
T ss_dssp SSSSCEETTEEECCCSSBTSCCBC--HHHHHHHH
T ss_pred CCCceEECCEEECCCCCcCCCcCC--HHHHHHHH
Confidence 56888874 999999999999 77776654
No 30
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=4.9e-58 Score=522.41 Aligned_cols=356 Identities=18% Similarity=0.211 Sum_probs=291.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g~ 571 (983)
|||++|+++.+++|+ | .. ..++.++|||+||+|++||||+.+.....++ +...++. +.|.|+|+
T Consensus 1 MkIt~i~~~~v~~pl--p---~~-------~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~---~~~~i~~~l~p~LiG~ 65 (412)
T 4e4u_A 1 MKIVSLETHIVAVPP--P---HV-------GGMYWIFVKLKTDDGIEGVGEIYSATFGPKA---MAPIIDDVFERHLLNR 65 (412)
T ss_dssp CCEEEEEEEEEECCT--T---CT-------TCSEEEEEEEEETTSCEEEEEECCCSSCHHH---HHHHHHHHHHHHTTTS
T ss_pred CEEEEEEEEEEccCC--C---cc-------CCCceEEEEEEECCCCEEEEeecCCCCCHHH---HHHHHHHHhHHHhCCC
Confidence 799999999999998 4 11 1268999999999999999999654433332 3344443 67999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
++.+++.++..++.. .+.........+|++|||||||||+||.+|+|||+||||.. +++|++|+++.
T Consensus 66 dp~~~e~~~~~l~~~----~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~yas~~ 132 (412)
T 4e4u_A 66 DPHHVERLFRQAYSS----GFTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLGGRI---------HERLRSYTYLY 132 (412)
T ss_dssp CTTCHHHHHHHHHHT----TTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCC---------CSSEEEEEECC
T ss_pred ChhHHHHHHHHHHHh----hhhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCc---------CCeeEEEEecc
Confidence 999877666432211 11111223357899999999999999999999999999975 57899998763
Q ss_pred --------CCCCHHHHHHHHHHhhhcCCCEEEEeccCCC-----------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCC
Q 041113 652 --------SNKSPVEVASIATTLVEEGFTAIKLKVARRA-----------DPIKDAEVIQEVRKKVGHRIELRVDANRNW 712 (983)
Q Consensus 652 --------~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~-----------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~ 712 (983)
...+++++++++++++++||++||+|+|.+. ++++|+++|++||+++|+++.|++|+|++|
T Consensus 133 ~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~ 212 (412)
T 4e4u_A 133 PKNAKGEYDYDDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQM 212 (412)
T ss_dssp CBCTTSCBCSSCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCB
T ss_pred CCcccccccCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 2358999999999999999999999998520 268899999999999999999999999999
Q ss_pred CHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcC
Q 041113 713 TYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIG 789 (983)
Q Consensus 713 ~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~G 789 (983)
|.++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++|+|++++|
T Consensus 213 ~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~~d~~~~G 287 (412)
T 4e4u_A 213 VPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKHTSIPIATGERLTTKYE-----FHKLLQAGGASILQLNVARVG 287 (412)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHTCSSCEEECTTCCHHHH-----HHHHHHTTCCSEECCCTTTTT
T ss_pred CHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHH-----HHHHHHcCCCCEEEeCccccC
Confidence 9999999999999999999999998 789999999999999999999998753 6666654 4799999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCce
Q 041113 790 GFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPIS 869 (983)
Q Consensus 790 Gl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~ 869 (983)
||+++++++++|+++|+++++| +++++|++++++||++++||.. . .++ +++...+.+|++.+|+.
T Consensus 288 Git~~~kia~~A~~~gi~v~~h-~~~s~i~~aa~~hlaaa~pn~~--~---~e~---------~~~~~~~~~d~~~~~~~ 352 (412)
T 4e4u_A 288 GLLEAKKIATLAEVHYAQIAPH-LYNGPVGAAASIQLATCTPNFL--I---QES---------IMTWGGFHAEVVKTPIR 352 (412)
T ss_dssp SHHHHHHHHHHHHHTTCEECCC-CCSCHHHHHHHHHHHHTCTTBC--C---EEE---------STTSCHHHHHTBSSCCE
T ss_pred CHHHHHHHHHHHHHcCCEEEec-CCCcHHHHHHHHHHHHhCCCce--e---eee---------cCccchhhHhhccCCCe
Confidence 9999999999999999997654 5789999999999999999641 1 000 12333456788888888
Q ss_pred eec----cCCCCeeeEEecchhhhhhhc-ccccc
Q 041113 870 ICH----NSCRGFVEASVAKATHILQNL-QINND 898 (983)
Q Consensus 870 ~~~----~P~~pGlGv~~d~a~~~~~~~-~~~~~ 898 (983)
+++ +|++|||||++| ++.++++ .....
T Consensus 353 ~~~G~i~~p~~PGlGve~d--~~~l~~~~~~~~~ 384 (412)
T 4e4u_A 353 WEDGYIIPSNEPGLGIELD--MDVVKRHTPYTGE 384 (412)
T ss_dssp EETTEEECCCSSBTSCCBC--HHHHHHTCCCCCS
T ss_pred eECCEEECCCCCCCCccCC--HHHHHhccCccCC
Confidence 884 999999999999 8888888 55444
No 31
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=3.1e-58 Score=523.93 Aligned_cols=363 Identities=17% Similarity=0.179 Sum_probs=293.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
+|||++|+++.+++|+ | .. ..++.++|||+||+|++||||+.+.....++ +...++. +.|.|+|
T Consensus 1 ~MkIt~i~~~~v~~pl--p---~~-------~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~---~~~~i~~~l~p~liG 65 (404)
T 4e5t_A 1 SMRLSDIETFVVGNPP--P---RH-------GGRYFIFVKLVTACGITGYGEIYNATFGPDL---VAKMAEDVFARQFAG 65 (404)
T ss_dssp -CCEEEEEEEEEECCT--T---CT-------TCSEEEEEEEEETTSCEEEEEECCCSSCHHH---HHHHHHHHHHHHTTT
T ss_pred CCEEEEEEEEEeccCC--c---cc-------CCCceEEEEEEECCCCEEEEeeccCCCchHH---HHHHHHHHHHHHhcC
Confidence 3799999999999998 4 11 1267899999999999999999654433332 3344443 6799999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..++.. ...........+|++|||+|||||+||.+|+|||+||||+. +++|++|+++
T Consensus 66 ~dp~~~e~~~~~~~~~----~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~~ 132 (404)
T 4e5t_A 66 EDPHHIEKLWHKTYGA----GYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLGGKV---------HERLRSYTYL 132 (404)
T ss_dssp SCTTCHHHHHHHHHTT----TSCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCC---------CSSEEEEEEC
T ss_pred CChhHHHHHHHHHHHh----hhhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcCCCC---------cCeEEEEEEe
Confidence 9999877665432211 11111123357899999999999999999999999999975 5789999875
Q ss_pred c--------------CCCCHHHHHHHHHHhhhcCCCEEEEeccCCC-----------ChHHHHHHHHHHHHHcCCCcEEE
Q 041113 651 D--------------SNKSPVEVASIATTLVEEGFTAIKLKVARRA-----------DPIKDAEVIQEVRKKVGHRIELR 705 (983)
Q Consensus 651 ~--------------~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~-----------~~~~d~~~v~~vr~~~g~~~~l~ 705 (983)
. +..+++++++++++++++||++||+|+|.+. ++++|++++++||+++|+++.|+
T Consensus 133 ~~~~~~~~p~~d~~~~~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~ 212 (404)
T 4e5t_A 133 YPTDGDVYPDPDKPNVYNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLL 212 (404)
T ss_dssp CC----------CCCTTTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEE
T ss_pred ccccccccccccccccCCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 3 1358999999999999999999999998520 27899999999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEE
Q 041113 706 VDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIV 782 (983)
Q Consensus 706 vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~ 782 (983)
+|+|++||.++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++|
T Consensus 213 vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~ 287 (404)
T 4e5t_A 213 FGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYTSIPVATGERLCTKYE-----FSRVLETGAASILQ 287 (404)
T ss_dssp ECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHH-----HHHHHHHTCCSEEC
T ss_pred EeCCCCcCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHH-----HHHHHHhCCCCEEe
Confidence 99999999999999999999999999999998 788999999999999999999998753 5555554 579999
Q ss_pred EcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccccc
Q 041113 783 IKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKED 862 (983)
Q Consensus 783 ~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 862 (983)
+|++++||++++++++++|+++|++++.| +++++|++++++||++++||.. . .++ +++...+.+|
T Consensus 288 ~d~~~~GGit~~~~ia~~A~~~gi~~~~h-~~~s~i~~aa~~hlaaa~p~~~--~---~e~---------~~~~~~~~~~ 352 (404)
T 4e5t_A 288 MNLGRVGGLLEAKKIAAMAECHSAQIAPH-LYCGPLVALANIQLATCSPNFL--V---LES---------IRTFDGFFAE 352 (404)
T ss_dssp CCTTTSSCHHHHHHHHHHHHHTTCEECCC-CSSCHHHHHHHHHHHHTCTTBC--C---EEE---------STTSCTHHHH
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeec-CCCcHHHHHHHHHHHHhCCCce--e---EEe---------cccccchhHH
Confidence 99999999999999999999999997654 5689999999999999999641 1 110 1222345667
Q ss_pred CCCCCceeec----cCCCCeeeEEecchhhhhhhcccccccccccc
Q 041113 863 VTTDPISICH----NSCRGFVEASVAKATHILQNLQINNDVICKTS 904 (983)
Q Consensus 863 ~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~~~i~~~~ 904 (983)
++.+++.+++ +|++||||+++| ++.++++.......+-.+
T Consensus 353 ~~~~~~~~~~G~i~~p~~PGlGve~d--~~~~~~~~~~~~~~~~~~ 396 (404)
T 4e5t_A 353 LLTTPIRWENGYIIPSQEPGLGHDLN--EDVARANPYTGSDLHLGF 396 (404)
T ss_dssp TBSSCCEEETTEEECCCSSBTSSCBC--HHHHHTSBCCCCSCSSCC
T ss_pred hcCCCCeeeCCEEECCCCCCCCcCCC--HHHHHhCcCCCCcceecc
Confidence 8888888884 999999999999 888889887655544333
No 32
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=2.8e-58 Score=519.97 Aligned_cols=349 Identities=16% Similarity=0.111 Sum_probs=290.6
Q ss_pred cceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHH-HHHHHhHhc
Q 041113 491 SICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQ-LRFLLHFMT 569 (983)
Q Consensus 491 ~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~-l~~~~~~l~ 569 (983)
++|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+.....+ .+... .+.+.|.|+
T Consensus 25 ~~mkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~---~~~~~i~~~l~p~l~ 97 (383)
T 3toy_A 25 TTAAITGVTARAVITPMKRPLRNAFGVI----DSGPLVLIDVTTDQGVTGHSYLFAYTRLAL---KPLVHLVEDIGRELA 97 (383)
T ss_dssp CCCBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEESSSCEEEEEEECSSGGGH---HHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEEEeccCCCcccCccccc----cceeEEEEEEEECCCCEEEEEeeCCCCchH---HHHHHHHHHHHHHhC
Confidence 4589999999999999999999998764 448999999999999999999987643222 22233 367899999
Q ss_pred cCcccccccccccCchhhhhhhcCC-CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGI-PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
|+++.+++ ++..+ ...... ...+..++|++|||+|||||+||.+|+|||+||||.+ ++||+|+
T Consensus 98 G~d~~~~e-~~~~l-----~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~----------~~v~~y~ 161 (383)
T 3toy_A 98 GKALVPVD-LMKAM-----DAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLGGSA----------RPIPAYD 161 (383)
T ss_dssp TCBCCHHH-HHHHH-----HHHTTTTCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCC----------CCEEEEE
T ss_pred CCCCCcHH-HHHHH-----HHHHhhcCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceEEeE
Confidence 99998765 54322 111111 1224467899999999999999999999999999975 6799999
Q ss_pred eecCCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 649 LIDSNKSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
++ +..+++++++++++++++ ||++||+|+|. .++++|+++|++||+++|+++.|++|+|++|++++|+++++.|+++
T Consensus 162 s~-g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~-~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 239 (383)
T 3toy_A 162 SY-GVLDARDDERTLRTACDEHGFRAIKSKGGH-GDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADY 239 (383)
T ss_dssp EC-SSCCHHHHHHHHHHHHHTSCCCEEEEECCS-SCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred ec-CCCCHHHHHHHHHHHHHccCCcEEEEecCC-CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhh
Confidence 86 347899999999999999 99999999997 3789999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++++++|++++++||++||++.+..+ +..+++ ..+|++|+|++++||++++++++++|+++
T Consensus 240 ~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~ 314 (383)
T 3toy_A 240 DLTWIEEPVPQENLSGHAAVRERSEIPIQAGENWWFPRG-----FAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAA 314 (383)
T ss_dssp CCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHH-----HHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcchHHHHHHHHhhcCCCEEeCCCcCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 9999999998 788999999999999999999998753 555555 45799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec---cCCCCeeeE
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH---NSCRGFVEA 881 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~---~P~~pGlGv 881 (983)
|+++++|++. .+++|++++++|.. . ++.. .+..+++.+|+.+++ +|++|||||
T Consensus 315 gi~~~~h~~~------~a~lhl~aa~p~~~--~---------------~e~~-~~~~~~~~~~~~~~~Gi~~p~~PGlGv 370 (383)
T 3toy_A 315 SIPMSSHILP------EASAHVLPVTPTAH--F---------------LEVL-DFAGAILTEPLRVIDGKVTAKGPGLGL 370 (383)
T ss_dssp TCCBCCCSCH------HHHHHHGGGCTTBC--C---------------EEEC-CSSGGGBSSCCCCBTTEECCCCSBTSC
T ss_pred CCEEeecCHH------HHHHHHHHhCCCCc--e---------------eecc-chhhhhccCCCeeeCCEECCCCCcCCc
Confidence 9998887764 36789999998641 0 0111 134456666776663 999999999
Q ss_pred Eecchhhhhhhccc
Q 041113 882 SVAKATHILQNLQI 895 (983)
Q Consensus 882 ~~d~a~~~~~~~~~ 895 (983)
++| ++.++++++
T Consensus 371 e~d--~~~l~~~~v 382 (383)
T 3toy_A 371 AWN--ESAVAKYQV 382 (383)
T ss_dssp CBC--HHHHHHHEE
T ss_pred cCC--HHHHHhhhC
Confidence 999 888888765
No 33
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=1.3e-58 Score=528.38 Aligned_cols=367 Identities=14% Similarity=0.138 Sum_probs=284.7
Q ss_pred cCCccceeEeEEEEEEEEeeCCCCCccccccc-------------cCcce--eeeEEEEEEEECCCCEEEEeecCcCcCc
Q 041113 487 SCSLSICKICRMEYSLYRIQLCAPPTSSYIDH-------------NRSRF--CREGFILSLYLEDGSVGYGEVAPLEIHK 551 (983)
Q Consensus 487 ~~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~-------------~~~~~--~~~~~lv~v~t~~G~~G~GE~~~~~~~~ 551 (983)
.++|.+.||++|+++.+.+|+..|+..+.... ++..+ ....++|||+||+|++||||+.+... .
T Consensus 20 Fqsm~~~~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~G~GE~~~~~~-~ 98 (412)
T 4h1z_A 20 FQSMMSDRVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYGLVA-P 98 (412)
T ss_dssp -----CCCEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCEEEEEEECSSC-H
T ss_pred HHhhccceeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCEEEEecCCCCC-H
Confidence 35676679999999999999999975432110 00001 14569999999999999999976532 1
Q ss_pred ccHHHHHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCC
Q 041113 552 ENLLDAEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPL 630 (983)
Q Consensus 552 ~~~~~~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~ 630 (983)
+ .+.+.+. .++|.|+|+++.+++.++..+.... ...+ ...+...+|++|||+|||||+||.+|+|||+||||.
T Consensus 99 ~---~~~~~i~~~lap~liG~dp~~~~~i~~~l~~~~--~~~~-~~~g~~~~A~saiD~ALwDl~gK~~g~Pl~~LLGG~ 172 (412)
T 4h1z_A 99 R---ATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLM--RVRG-YTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLGGQ 172 (412)
T ss_dssp H---HHHHHHHHTHHHHHTTSCGGGHHHHHHHHHTTT--GGGT-CCSHHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCC
T ss_pred H---HHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH--Hhcc-cccchHHHHHHHHHHHHHHHHHHHcCCCHHHhcCCC
Confidence 1 2233333 4789999999988766654321110 1111 112345679999999999999999999999999998
Q ss_pred CccccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCC
Q 041113 631 TEIDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANR 710 (983)
Q Consensus 631 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~ 710 (983)
. ++++++|++.....+++++.+.+++++++||++||+|+|. +.+.|+++++++|+++|+++.||+|+|+
T Consensus 173 ~---------~~~v~~y~s~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~--~~~~~~~~v~~vR~~~g~~~~l~vDaN~ 241 (412)
T 4h1z_A 173 R---------RDRIAAYISGLPEDTRAKRAELAAAWQAKGFSSFKFASPV--ADDGVAKEMEILRERLGPAVRIACDMHW 241 (412)
T ss_dssp C---------CSEEEEEECCCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG--CTTCHHHHHHHHHHHHCSSSEEEEECCS
T ss_pred C---------CceEEEEeccCCCCcHHHHHHHHHHHHhcCcceecccccc--chhhHHHHHHHHHhccCCeEEEEecccc
Confidence 7 6789999887667789999999999999999999999997 5678999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCC
Q 041113 711 NWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSV 787 (983)
Q Consensus 711 ~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~ 787 (983)
+||+++|+++++.|+++++.|||||++ |++++++|++++++|||+||++++..+ +..+++. .+|++|+|+++
T Consensus 242 ~~~~~~A~~~~~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~div~~d~~~ 316 (412)
T 4h1z_A 242 AHTASEAVALIKAMEPHGLWFAEAPVRTEDIDGLARVAASVSTAIAVGEEWRTVHD-----MVPRVARRALAIVQPEMGH 316 (412)
T ss_dssp CCCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSEEEECTTCCSHHH-----HHHHHHTTCCSEECCCHHH
T ss_pred CCCHHHHHHHHHhhcccccceecCCCCccchHHHHHHHhhcCCccccCCcccchHh-----HHHHHHcCCCCEEEecCCC
Confidence 999999999999999999999999998 789999999999999999999999764 5555544 47999999986
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCC
Q 041113 788 IGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDP 867 (983)
Q Consensus 788 ~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p 867 (983)
|||++++|++++|+++|++++.|++++++|++++++|++++++|+.. .+ +. .....+.++++.++
T Consensus 317 -GGit~~~kia~~A~~~gi~v~~h~~~~~~i~~aa~lhl~aa~~~~~~-----~e--------~~-~~~~~~~~~~~~~~ 381 (412)
T 4h1z_A 317 -KGITQFMRIGAYAHVHHIKVIPHATIGAGIFLAASLQASAALANVDC-----HE--------FQ-HSIFEPNRRLLVGD 381 (412)
T ss_dssp -HHHHHHHHHHHHHHHTTCEECCCCCSSCSHHHHHHHHHHHHCTTBCC-----EE--------EC-HHHHTGGGGGEEEC
T ss_pred -CChHHHHHHHHHHHHCCCcEEecCCcchHHHHHHHHHHHHhCCCCCe-----ee--------cc-ccccccchhhccCC
Confidence 99999999999999999999999999999999999999999997421 00 00 11123345666778
Q ss_pred ceeec----cCCCCeeeEEecchhhhhhhc
Q 041113 868 ISICH----NSCRGFVEASVAKATHILQNL 893 (983)
Q Consensus 868 ~~~~~----~P~~pGlGv~~d~a~~~~~~~ 893 (983)
+.+++ +|++||||||+| ++.++.+
T Consensus 382 ~~~~~G~i~vp~~PGLGve~d--~eal~~~ 409 (412)
T 4h1z_A 382 MDCLNGEYVVPTGPGLGVEPS--KEAQGLL 409 (412)
T ss_dssp CEEETTEEECCCSSBTSEEEC--HHHHHHC
T ss_pred CeEECCEEECCCCCCCCeEEC--HHHHHHh
Confidence 88874 999999999999 5555544
No 34
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=6.5e-58 Score=518.83 Aligned_cols=357 Identities=15% Similarity=0.145 Sum_probs=301.6
Q ss_pred ccceeEeEEEEEEEEeeCCC-CCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHh
Q 041113 490 LSICKICRMEYSLYRIQLCA-PPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLH 566 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~-p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~ 566 (983)
|++|||++|+++.+++|++. ||.++.+.. .+.++.++|+|+|++|++||||+.+. + +++++...+...++.+.|
T Consensus 1 m~~MkI~~i~~~~~~~pl~~~p~~~s~~~~---~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~l~~ 77 (371)
T 2ps2_A 1 MSDLKIARIDVFQVDLPYSGGVYYLSAGRE---YRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAP 77 (371)
T ss_dssp --CCCEEEEEEEEEEECBTTSCCCCC----------EEEEEEEEEETTSCEEEEEECCSTTTSSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEEEecccCCCCeeecccce---eccCceEEEEEEECCCCEEEEEEecCCcccCCCCHHHHHHHHHHHHH
Confidence 55689999999999999999 998876521 13488999999999999999999875 3 456676667777878999
Q ss_pred HhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 567 FMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 567 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
.|+|+++.+++.++..+ .... ...++|++|||+||||+.||.+|+|||+||||.. +++||+
T Consensus 78 ~l~g~d~~~~~~~~~~l-----~~~~-----~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~vp~ 138 (371)
T 2ps2_A 78 SLIGLDPRRVDRINDAM-----DDAL-----LGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRT---------NTRLPL 138 (371)
T ss_dssp HHTTSCTTCHHHHHHHH-----HHHC-----SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCC---------SSCEEB
T ss_pred HHCCCCcccHHHHHHHH-----HHHh-----cccHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCceEE
Confidence 99999988765554321 1111 1246899999999999999999999999999975 468999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc-c
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI-K 725 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l-~ 725 (983)
|++++ ..+++++.+.+++++++||++||+|+|. +++.|+++|++||+++|+++.|++|+|++|+.++|+++++.| +
T Consensus 139 ~~~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~ 215 (371)
T 2ps2_A 139 ISSIY-VGEPEDMRARVAKYRAKGYKGQSVKISG--EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPH 215 (371)
T ss_dssp EEEEC-SCCHHHHHHHHHHHHTTTCCEEEEECCS--CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCT
T ss_pred EEEeC-CCCHHHHHHHHHHHHHhChheEEeecCC--CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHh
Confidence 99874 4689999999999999999999999996 789999999999999999999999999999999999999999 9
Q ss_pred cCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 726 DCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 726 ~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++++ |||||+++++.++++++++++||++||++.+.. .+..+++ ..+|++++|++++||++++++++++|+++
T Consensus 216 ~~~i-~iE~P~~~~~~~~~l~~~~~iPI~~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 289 (371)
T 2ps2_A 216 GLDF-ALEAPCATWRECISLRRKTDIPIIYDELATNEM-----SIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAA 289 (371)
T ss_dssp TCCC-EEECCBSSHHHHHHHHTTCCSCEEESTTCCSHH-----HHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHH
T ss_pred hcCC-cCcCCcCCHHHHHHHHhhCCCCEEeCCCcCCHH-----HHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHc
Confidence 9999 999999989999999999999999999998865 3555554 45799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++++||++||+|++++++|++++++|.. ..+++++..++.+|++.+|+.+++ +|++||||
T Consensus 290 g~~~~~~~~~es~i~~aa~~hlaa~~~~~~--------------~~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlG 355 (371)
T 2ps2_A 290 GYSVSVQETCGSDIAFAAIVHLAQTIPERS--------------LRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLG 355 (371)
T ss_dssp TCEEEEECSSCCHHHHHHHHHHHTTSCTTT--------------EEEECCGGGGBSCCCEECCCCCBTTEECCCCSSBTS
T ss_pred CCeEEecCCCcCHHHHHHHHHHHHhCCCcc--------------cccccccchhhhccccCCCceEECCEEECCCCCCCC
Confidence 999999999999999999999999998631 122345556778888777887773 89999999
Q ss_pred EEecchhhhhhhc
Q 041113 881 ASVAKATHILQNL 893 (983)
Q Consensus 881 v~~d~a~~~~~~~ 893 (983)
+++| ++.+++.
T Consensus 356 v~~d--~~~l~~~ 366 (371)
T 2ps2_A 356 IMPR--LDVLGEA 366 (371)
T ss_dssp CEEC--HHHHCSC
T ss_pred CeeC--HHHHhCh
Confidence 9999 6666543
No 35
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=2.8e-58 Score=521.22 Aligned_cols=353 Identities=17% Similarity=0.149 Sum_probs=291.7
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhc
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~ 569 (983)
|++|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+.....+. ......+.+.|.|+
T Consensus 25 ~~~mkI~~i~~~~~~~pl~~p~~~s~g~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~--~~~~~~~~l~p~li 98 (390)
T 3ugv_A 25 AQTLTFRKLTARPVLLKLQRPVTARIATI----PDWPLILIDIETEEGVPGRAYLEPYVPKAMK--YLVPALHDMSDMLA 98 (390)
T ss_dssp --CCBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCCEEEEECCSCGGGHH--HHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEEEEEEecCCCCccCccccc----ccceEEEEEEEECCCCEEEEEeecCCCchHH--HHHHHHHHHHHHHC
Confidence 34589999999999999999999998764 4489999999999999999999875422221 12223367999999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.++ .++..+.... ...+ ..+..++|++|||+|||||+||.+|+|||+||||.+ ++||+|++
T Consensus 99 G~d~~~~-~~~~~l~~~~--~~~g--~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~----------~~v~~y~s 163 (390)
T 3ugv_A 99 GQPLAPA-EIYDKTRKSL--HFVG--YAGLSMIAASGVDMAVWDALARAANMPLCTLLGGTP----------GSVKAYNS 163 (390)
T ss_dssp TSBCCHH-HHHHHHHHHT--GGGC--SSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCC----------CEEEEEEC
T ss_pred CCCcchH-HHHHHHHHHH--HhhC--CcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC----------CceEEEEe
Confidence 9998876 5543221110 0011 124567999999999999999999999999999975 67999987
Q ss_pred ecC--CCCHHHHHHHHHHhhhc---CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc
Q 041113 650 IDS--NKSPVEVASIATTLVEE---GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI 724 (983)
Q Consensus 650 ~~~--~~~~~~~~~~~~~~~~~---G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l 724 (983)
+.. ..+++++++++++++++ ||++||+|+|. .++++|+++|++||+++|+++.|++|+|++|++++|+++++.|
T Consensus 164 ~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~-~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l 242 (390)
T 3ugv_A 164 NGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGR-DDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQI 242 (390)
T ss_dssp SCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCC-SSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCC-CCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 632 26899999999999999 99999999997 3789999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 725 KDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 725 ~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++|+|++++||++++++++++|
T Consensus 243 ~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A 317 (390)
T 3ugv_A 243 DDLGLEWIEEPVVYDNFDGYAQLRHDLKTPLMIGENFYGPRE-----MHQALQAGACDLVMPDFMRIGGVSGWMRAAGVA 317 (390)
T ss_dssp TTSCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHH-----HHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHH
T ss_pred HhhCCCEEECCCCcccHHHHHHHHHhcCCCEEeCCCcCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 9999999999998 788999999999999999999998753 6666654 4799999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRG 877 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~p 877 (983)
+++|+++++|++. .+++|++++++|.. . ++.. .+..+++.+|+.+++ +|++|
T Consensus 318 ~~~gi~~~~h~~~------~a~lhl~aa~p~~~--~---------------~e~~-~~~~~~~~~~~~~~~G~i~~p~~P 373 (390)
T 3ugv_A 318 GAWGIPMSTHLYP------EVGAHVMRVTETAH--W---------------LEWQ-SWADPILQEPYALSDGDLIVPDKP 373 (390)
T ss_dssp HHHTCCBCCBSCH------HHHHHHHTTCTTBC--C---------------EEEC-CTTGGGBSSCCCEETTEEECCSSS
T ss_pred HHcCCEEeecCHH------HHHHHHHHhCCCCc--e---------------eecc-chhhhhccCCCeeECCEEECCCCC
Confidence 9999999887764 36789999998641 0 0111 134567778888874 99999
Q ss_pred eeeEEecchhhhhhhccc
Q 041113 878 FVEASVAKATHILQNLQI 895 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~ 895 (983)
||||++| ++.++++++
T Consensus 374 GlGve~d--~~~l~~~~~ 389 (390)
T 3ugv_A 374 GLGLDWD--EDVVAANLV 389 (390)
T ss_dssp BTCCCBC--HHHHHTTBC
T ss_pred cCCCCcC--HHHHHhhhc
Confidence 9999999 888888764
No 36
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=6.5e-58 Score=517.05 Aligned_cols=353 Identities=16% Similarity=0.199 Sum_probs=290.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH---------
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF--------- 563 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~--------- 563 (983)
|||++|+++.+++|++.+. +++ ..++ ++|||+||+|++||||+. ++...+...++.
T Consensus 3 MkI~~i~~~~~~~P~~~~~----~~~----~~~~-~~V~v~td~G~~G~GE~~------~~~~~~~~~i~~~~~~~~~~~ 67 (374)
T 3sjn_A 3 LKITDIEVLHLRVPAMDAD----CEW----GEDA-VIVKVHTDKGIVGVGEAD------SSPLVVQACIEAPQTNFYCNG 67 (374)
T ss_dssp CBEEEEEEEEEESSCTTSC----CCT----TSEE-EEEEEEETTSCEEEEEES------SCHHHHHHHHHCCCSBTTBCC
T ss_pred cEEEEEEEEEEeccCcCCc----Ccc----cceE-EEEEEEECCCCEEEEcCC------CChHHHHHHHHhhhccchHhH
Confidence 8999999999998876652 222 1245 899999999999999932 223344555665
Q ss_pred HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce
Q 041113 564 LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS 643 (983)
Q Consensus 564 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~ 643 (983)
+.|.|+|+++.+++.++..++. ........+...+|++|||+|||||+||.+|+|||+||||.. +++
T Consensus 68 l~p~liG~d~~~~~~~~~~l~~----~~~~~~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg~~---------r~~ 134 (374)
T 3sjn_A 68 LKRLLIGENALEIERLWNKMYW----GSNYMGRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLGGKY---------RDK 134 (374)
T ss_dssp HHHHHTTSBTTCHHHHHHHHHH----HTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSE
T ss_pred HHHHHcCCCcccHHHHHHHHHH----hhhhcCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCCCc---------CCc
Confidence 8999999999887666643221 111112345567899999999999999999999999999965 578
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC-CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCC-HHHHHHHH
Q 041113 644 IKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARR-ADPIKDAEVIQEVRKKVGHRIELRVDANRNWT-YQEALEFG 721 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~-~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~-~~~a~~~~ 721 (983)
||+|..+....+++++++.+++++++||++||+|+|.. .++++|++++++||+++|+++.|++|+|++|+ +++|++++
T Consensus 135 v~~y~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~ 214 (374)
T 3sjn_A 135 IRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMA 214 (374)
T ss_dssp EEEEEEECCCSSGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHH
T ss_pred eeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHH
Confidence 99996554334558999999999999999999999842 26899999999999999999999999999999 99999999
Q ss_pred hhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHH
Q 041113 722 FLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIA 798 (983)
Q Consensus 722 ~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~ 798 (983)
+.|+++++.|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++++|++++||++++++++
T Consensus 215 ~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~~~d~v~~k~~~~GGit~~~~ia 289 (374)
T 3sjn_A 215 KRLEEFNLNWIEEPVLADSLISYEKLSRQVSQKIAGGESLTTRYE-----FQEFITKSNADIVQPDITRCGGITEMKKIY 289 (374)
T ss_dssp HHSGGGCCSEEECSSCTTCHHHHHHHHHHCSSEEEECTTCCHHHH-----HHHHHHHHCCSEECCBTTTSSHHHHHHHHH
T ss_pred HHhhhcCceEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 9999999999999998 788999999999999999999998753 555554 35799999999999999999999
Q ss_pred HHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cC
Q 041113 799 RWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NS 874 (983)
Q Consensus 799 ~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P 874 (983)
++|+++|+++++|++ +++|++++++||+++++|.. . .++ .....++.+|++.+|+.+++ +|
T Consensus 290 ~~A~~~gi~~~~h~~-~~~i~~aa~~hlaaa~~~~~--~---~e~---------~~~~~~~~~d~~~~~~~~~~G~~~~p 354 (374)
T 3sjn_A 290 DIAQMNGTQLIPHGF-STGILLHASVHFLAACEQGT--L---MEF---------SQSSSPLFTSLVKNQLQFDNGFVAVS 354 (374)
T ss_dssp HHHHHHTCEECCBCC-SCHHHHHHHHHHHHTCTTCC--E---EEE---------ECCCCHHHHHSBTTCCCEETTEEECC
T ss_pred HHHHHcCCEEEecCC-CcHHHHHHHHHHHHhCCCCc--E---EEe---------cCCcchhhhhhccCCCeeeCcEEECC
Confidence 999999999887776 99999999999999999641 1 111 11223456788888898884 99
Q ss_pred CCCeeeEEecchhhhhhhccc
Q 041113 875 CRGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 875 ~~pGlGv~~d~a~~~~~~~~~ 895 (983)
++||||+++| ++.++++++
T Consensus 355 ~~PGlGv~~d--~~~l~~~~~ 373 (374)
T 3sjn_A 355 DAPGLGIELD--EELIAKYRV 373 (374)
T ss_dssp CSSBTCCCBC--HHHHHHHBC
T ss_pred CCCCCCCCcC--HHHHHhccC
Confidence 9999999999 888888765
No 37
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=5.7e-58 Score=523.88 Aligned_cols=353 Identities=16% Similarity=0.159 Sum_probs=291.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g~ 571 (983)
|||++|+++.++.|++ +.+ .++.++|||+||+|++||||+.+.....++ +...++. +.|.|+|+
T Consensus 2 MkIt~i~~~~~~~p~~-----~~~-------~~~~v~V~v~Td~G~~G~GE~~~~~~~~~~---v~~~i~~~l~p~LiG~ 66 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAP-----GWG-------GRYWILVKLTTDDGITGWGECYAASVGPEA---MRAVIEDVFARHMEGE 66 (433)
T ss_dssp CCEEEEEEEEECCCTT-----CTT-------CSCEEEEEEEETTSCEEEEEECCCSSCHHH---HHHHHHHHHHHHTTTS
T ss_pred CeEEEEEEEEEcCCCC-----ccC-------CceEEEEEEEECCCCEEEEeccCCCCCHHH---HHHHHHHHHHHHhCCC
Confidence 8999999999988873 121 267899999999999999998765543333 3444554 89999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCc-chhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACE-IFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
++.+++.++..++ +........ ...+|++|||||||||+||.+|+|||+||||.. +++|++|+++
T Consensus 67 dp~~ie~~~~~l~-----~~~~~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~~ 132 (433)
T 3rcy_A 67 NPENIELMFRRVY-----SSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKM---------NPRIRAYTYL 132 (433)
T ss_dssp CTTCHHHHHHHHH-----HTTTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCS---------CSSEEEEEEC
T ss_pred CcccHHHHHHHHH-----hcccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCC---------CCeEEEEEEE
Confidence 9998776664322 111111112 467899999999999999999999999999976 5789999876
Q ss_pred c---C------CCCHHHHHHHHHHhhhcCCCEEEEeccCCC-----------ChHHHHHHHHHHHHHcCCCcEEEEEcCC
Q 041113 651 D---S------NKSPVEVASIATTLVEEGFTAIKLKVARRA-----------DPIKDAEVIQEVRKKVGHRIELRVDANR 710 (983)
Q Consensus 651 ~---~------~~~~~~~~~~~~~~~~~G~~~~KiKig~~~-----------~~~~d~~~v~~vr~~~g~~~~l~vDaN~ 710 (983)
. + ..+++++++++++++++||++||+|+|.+. +++.|+++|++||+++|+++.|++|+|+
T Consensus 133 ~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~ 212 (433)
T 3rcy_A 133 YPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG 212 (433)
T ss_dssp CCCTTSCHHHHTTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS
T ss_pred cccCCcccccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 2 1 168999999999999999999999998521 3578999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCC
Q 041113 711 NWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSV 787 (983)
Q Consensus 711 ~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~ 787 (983)
+|+.++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+..+ +..+++. .+|++|+|+++
T Consensus 213 ~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~g~~D~v~~d~~~ 287 (433)
T 3rcy_A 213 QFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAE-----FAPVLREGAAAILQPALGR 287 (433)
T ss_dssp CBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTCCSHHH-----HHHHHHTTCCSEECCCHHH
T ss_pred CCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCCCCHHH-----HHHHHHcCCCCEEEeCchh
Confidence 999999999999999999999999998 788999999999999999999998753 6666654 47999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCC
Q 041113 788 IGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDP 867 (983)
Q Consensus 788 ~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p 867 (983)
+|||+++++++++|+++|+++++|+ ++++|++++++||++++||+. . +.+... .+.+|++.++
T Consensus 288 ~GGit~~~kia~lA~~~gv~~~~h~-~~s~i~~aa~lhlaaa~pn~~--~-------------~E~~~~-~~~~~~~~~~ 350 (433)
T 3rcy_A 288 AGGIWEMKKVAAMAEVYNAQMAPHL-YAGPVEWAANVHFAASIPNIL--M-------------CESIET-PFHDALIKGS 350 (433)
T ss_dssp HTHHHHHHHHHHHHHTTTCEECCCC-SSCHHHHHHHHHHHHTCTTBC--C-------------EECCCC-HHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHHHHhccCc--E-------------EEeccc-hhhhhhcCCC
Confidence 9999999999999999999987664 799999999999999999641 1 011112 3456777888
Q ss_pred ceeec----cCCCCeeeEEecchhhhhhhcccccc
Q 041113 868 ISICH----NSCRGFVEASVAKATHILQNLQINND 898 (983)
Q Consensus 868 ~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~~ 898 (983)
+.+++ +|++|||||++| ++.++++.....
T Consensus 351 ~~~~~G~i~~p~~PGLGve~d--~~~l~~~~~~~~ 383 (433)
T 3rcy_A 351 IRVEGGYITPPEAPGLGIEVD--EALARANPYHGT 383 (433)
T ss_dssp SCEETTEECCCCSSBTCCCCC--HHHHHTSBCCCS
T ss_pred ceEECCEEEcCCCCcCCcccC--HHHHHhccCCCc
Confidence 88884 999999999999 888989886644
No 38
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=1.8e-58 Score=523.25 Aligned_cols=360 Identities=18% Similarity=0.206 Sum_probs=282.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc-CcccHHHHHHHHH-HHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI-HKENLLDAEEQLR-FLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~-~~~~~~~~~~~l~-~~~~~l~g 570 (983)
|||++|+++.+++|++.||.++.+++ ..++.++|+|+|++|++||||+.+..+ .+++... ..+. .+.|.|+|
T Consensus 10 mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~--~~i~~~l~p~liG 83 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTM----HDRPAVLVEVEDSDGAVGWGEVWCNFPACGAEHRA--RLVETVLAPLLTA 83 (392)
T ss_dssp BCCCEEEEEEEEEEC---------------CEEEEEEEEEECTTSCEEEEECCCCSSTTHHHHHH--HHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEeccCCCcccCcCcee----ecceEEEEEEEECCCCEEEEEeccCCCCCchHHHH--HHHHHHHHHHhCC
Confidence 89999999999999999999998765 348899999999999999999953211 1222111 1223 58899999
Q ss_pred CcccccccccccCchh----hhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 571 AKISYFLPLLKGSFSS----WIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
+++.+++.++..+... ..+ .+ ..+...+|++|||+|||||+||.+|+|||+||||.. ++||+
T Consensus 84 ~d~~~~~~~~~~l~~~~~~~~~~--~g--~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~----------~~v~~ 149 (392)
T 3ddm_A 84 RAFADPAQAFAHLEARTAVLAIQ--TG--EPGPLAQAIAGLDIALCDLAARRAGQPLWAWLGGSG----------DRIGV 149 (392)
T ss_dssp SCBSSHHHHHHHHHHTTHHHHHH--HT--CHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSC----------CEEEE
T ss_pred CCcCCHHHHHHHHHhhhhhhhhh--cC--CcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCC----------CceeE
Confidence 9998877666433221 001 11 112457899999999999999999999999999975 67999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD 726 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 726 (983)
|++. ..++++.+++++++++||++||+|+|. ++++|+++|++||+++|+++.|++|+|++|++++|+++++.|++
T Consensus 150 y~~g---~~~e~~~~~a~~~~~~G~~~iKlK~g~--~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~ 224 (392)
T 3ddm_A 150 YASG---INPENPEDVVARKAAEGYRAFKLKVGF--DDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGP 224 (392)
T ss_dssp EEEE---ECSSSHHHHHHHHHHHTCCCEEEECSS--CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGG
T ss_pred Eeec---CCHHHHHHHHHHHHHcCCCEEEEecCC--CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 9873 237889999999999999999999997 79999999999999999999999999999999999999999999
Q ss_pred CCCceeecCCC--C-hHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHH
Q 041113 727 CDLQYIEEPVQ--N-EEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQ 802 (983)
Q Consensus 727 ~~i~~iEeP~~--~-~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~ 802 (983)
+++.|||||++ + ++++++|++++++||++||++++..+ +..+++ ..+|++++|++++||++++++++++|+
T Consensus 225 ~~i~~iEeP~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~ 299 (392)
T 3ddm_A 225 AQLDWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAA-----FETALAARSLRVMQPDLAKWGGFSGCLPVARAVV 299 (392)
T ss_dssp GCCSEEECCSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHH-----HHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHH
T ss_pred hCCCEEECCCCccchHHHHHHHHHhcCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHH
Confidence 99999999998 6 88899999999999999999998753 666654 457999999999999999999999999
Q ss_pred HcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCc-eeec----cCCCC
Q 041113 803 RHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPI-SICH----NSCRG 877 (983)
Q Consensus 803 ~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~-~~~~----~P~~p 877 (983)
++|++++ +|+++++|++++++|+++++||.. ...+.+++. .. ..+. |++.+|+ .+++ +|++|
T Consensus 300 ~~gi~~~-~h~~~~~i~~aa~~hl~aa~p~~~--~~~~~e~~~--------~~-~~~~-~~~~~~~~~~~~G~i~~p~~P 366 (392)
T 3ddm_A 300 AAGLRYC-PHYLGAGIGLQASAHLLAAVPGLA--SPGLLGVDA--------ND-NPLR-SLLSPALATLHEGRITLGGAP 366 (392)
T ss_dssp HTTCEEC-CEECSCHHHHHHHHHHHHHSCCSS--SCCEEEEES--------SC-CHHH-HTTCGGGGGCBTTEEECCSCS
T ss_pred HcCCEEE-ecCCchHHHHHHHHHHHHhCCCCC--CCceEEecC--------Cc-chHH-HhccCCcceeeCCEEECCCCC
Confidence 9999975 777999999999999999998620 101112211 11 1122 3667777 7773 99999
Q ss_pred eeeEEecchhhhhhhccccc
Q 041113 878 FVEASVAKATHILQNLQINN 897 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~~~ 897 (983)
||||++| ++.++++..+.
T Consensus 367 GlGve~d--~~~l~~~~~~~ 384 (392)
T 3ddm_A 367 GLGVTPD--LAALRAACAAR 384 (392)
T ss_dssp BTSCCCC--HHHHHHHC---
T ss_pred cCCceeC--HHHHHHhhhhc
Confidence 9999999 88888887654
No 39
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=1.2e-57 Score=514.48 Aligned_cols=356 Identities=17% Similarity=0.197 Sum_probs=283.0
Q ss_pred eeEeEEEEEEEEeeCCCCC-ccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPP-TSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~-~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l~g 570 (983)
|||++|+++.+++||+.|| .++.++. ..++.++|+|+||+|++||||+.+..... .-..+...++ .+.|.|+|
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~----~~~~~v~V~v~td~G~~G~GE~~~~~~~~-~~~~~~~~i~~~l~p~liG 75 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSI----THWGVVGAKITTSDGIEGYGFTGTHAHLP-SDRLITSCISDCYAPLLLG 75 (372)
T ss_dssp CBEEEEEEEEEEEECC----------------EEEEEEEEEEETTSCEEEEEEEECCCHH-HHHHHHHHHHHTTHHHHTT
T ss_pred CEEEEEEEEEEEecCCCCccCCCcccc----CceeEEEEEEEECCCCEEEEeccCccccC-cHHHHHHHHHHHHHHHhCC
Confidence 7999999999999999999 8888754 44889999999999999999997654111 0122344454 68999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+.....+ .+....+...+|++|||+|||||+||.+|+|||+||||.. +++||+|++.
T Consensus 76 ~d~~~~~~~~~~l~~~~~~--~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llGg~~---------~~~v~~y~s~ 144 (372)
T 3tj4_A 76 EDASDHSRLWTKLARYPSL--QWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGAR---------TAGVEAYNTD 144 (372)
T ss_dssp SBTTCHHHHHHHHHTCHHH--HTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSCEEEEECT
T ss_pred CChhhHHHHHHHHHHhhHh--hcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcCCCC---------CCCeEEEEec
Confidence 9998876665432211111 1111124578999999999999999999999999999986 4569999873
Q ss_pred c--CCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 651 D--SNKSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 651 ~--~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
. ...+++++.+++++++++ ||++||+|+|. .++++|++++++||+++|+++.|++|+|++||+++|+++++.|+++
T Consensus 145 ~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~-~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 223 (372)
T 3tj4_A 145 IGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGH-DDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDL 223 (372)
T ss_dssp TCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCC-SSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred CCccCCCHHHHHHHHHHHHHccCCCEEEEcCCC-CCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhc
Confidence 2 234899999999999999 99999999996 3789999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++++++|++++++||++||++++..+ +..+++. .+|++|+|++++||++++++++++|+++
T Consensus 224 ~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 298 (372)
T 3tj4_A 224 DIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDA-----FRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAH 298 (372)
T ss_dssp CEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHH-----HHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 9999999998 788999999999999999999998753 5666554 4799999999999999999999999999
Q ss_pred CCcEEeCC--CCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCe
Q 041113 805 GKMAVVSA--AFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGF 878 (983)
Q Consensus 805 gi~~~~~~--~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pG 878 (983)
|+++++|+ +.+ +++|++++++|+. . .+ + ..+ .+|++.+|+.+++ +|++||
T Consensus 299 gi~~~~h~g~~~~------~~~~l~aa~~~~~--~---~e----------~--~~~-~~~~~~~~~~~~~G~i~~p~~PG 354 (372)
T 3tj4_A 299 RLPVVPHAGEMSQ------VHVHLSYWHPAST--I---LE----------Y--IPW-IKDHFEEPIHVRDGVYKRPEQPG 354 (372)
T ss_dssp TCCBCCCCTTTTT------THHHHHHHCTTBC--C---EE----------E--CCS-SGGGBSSCCCEETTEECCCCSSB
T ss_pred CCEEEecCchHHH------HHHHHhhhCCCCc--e---ee----------e--chH-HHHhccCCCceeCCEEECCCCCC
Confidence 99988877 655 4789999998641 1 11 1 122 3466677888874 999999
Q ss_pred eeEEecchhhhhhhcccc
Q 041113 879 VEASVAKATHILQNLQIN 896 (983)
Q Consensus 879 lGv~~d~a~~~~~~~~~~ 896 (983)
||+++| ++.+++++..
T Consensus 355 lGv~~d--~~~l~~~~~~ 370 (372)
T 3tj4_A 355 ASTTPL--AESFTRYGKA 370 (372)
T ss_dssp CSCCBC--HHHHHHHEEC
T ss_pred CCCcCC--HHHHHHhhhc
Confidence 999999 8888887643
No 40
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.2e-57 Score=518.23 Aligned_cols=352 Identities=20% Similarity=0.219 Sum_probs=297.2
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHhH
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLHF 567 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~~ 567 (983)
+|||++|+++.+++|++.||.++.+.+ +.++.++|+|+|++|++||||+.+.+ +.+++...+...++. +.|.
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~v~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~ 94 (386)
T 1wue_A 19 HMNIQSIETYQVRLPLKTPFVTSYGRL----EEKAFDLFVITDEQGNQGFGELVAFEQPDYVQETLVTERFIIQQHLIPL 94 (386)
T ss_dssp CCCEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTHHHH
T ss_pred cCEEEEEEEEEEecccCCCccccceEE----ecCcEEEEEEEECCCCEEEEEeecCCCCcccCCcHHHHHHHHHHHHHHH
Confidence 389999999999999999999888754 44889999999999999999998643 456776666666665 7899
Q ss_pred hccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 568 MTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 568 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
|+|+++.+...++.. +.. + ...++|++|||+||||++||..|+|||+||||. +++||+|
T Consensus 95 l~G~d~~~~~~l~~~-----l~~-~-----~g~~~A~~aid~AlwDl~~k~~g~Pl~~llGg~----------~~~v~~~ 153 (386)
T 1wue_A 95 LLTEAIEQPQEVSTI-----FEE-V-----KGHWMGKAALETAIWDLYAKRQQKSLTEFFGPT----------RRKIPVG 153 (386)
T ss_dssp HTTSCCCSTHHHHHH-----GGG-S-----CSCHHHHHHHHHHHHHHHHHHTTSBGGGGSSSC----------CSEEECC
T ss_pred HcCCCccCHHHHHHH-----HHH-c-----cCchHHHHHHHHHHHHHHHHHhCCcHHHHhCCC----------CCeeEee
Confidence 999988765444321 111 1 113789999999999999999999999999994 3689999
Q ss_pred EeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 648 ALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
++++...+++++.+++++++++||++||+|+|. ++|+++|++||+++ +++.|++|+|++|+.++| ++++.|++|
T Consensus 154 ~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg~----~~d~~~v~avr~a~-~~~~l~vDaN~~~~~~~a-~~~~~l~~~ 227 (386)
T 1wue_A 154 ISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIRP----GYDVEPVALIRQHF-PNLPLMVDANSAYTLADL-PQLQRLDHY 227 (386)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCSCEEEECBT----TBSHHHHHHHHHHC-TTSCEEEECTTCCCGGGH-HHHHGGGGS
T ss_pred EEecCCCCHHHHHHHHHHHHHhhhheEEEeeCc----HHHHHHHHHHHHhC-CCCeEEEeCCCCCCHHHH-HHHHHHHhC
Confidence 887534579999999999999999999999973 56899999999999 899999999999999999 999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ |++++++|++++++||++||++++.. .+..+++. .+|++|+|++++||++++++++++|+++
T Consensus 228 ~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~ 302 (386)
T 1wue_A 228 QLAMIEQPFAADDFLDHAQLQRELKTRICLDENIRSLK-----DCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQEN 302 (386)
T ss_dssp CCSCEECCSCTTCSHHHHHHHTTCSSCEEECTTCCSHH-----HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCeEEeCCCCcccHHHHHHHHHhcCCCEEeCCccCCHH-----HHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHC
Confidence 9999999998 78999999999999999999999865 36666654 4799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCcc-chhcccccCCCCCceeec----cCCCCee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLG-TYQWLKEDVTTDPISICH----NSCRGFV 879 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~d~~~~p~~~~~----~P~~pGl 879 (983)
|++++++|++||+|+.++++|+| +++|.. ....++ +..++.+|++.+|+.+++ +|++|||
T Consensus 303 gi~~~~~~~~es~i~~aa~~hla-a~~~~~--------------~~~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGl 367 (386)
T 1wue_A 303 DLLVWLGGMFESGVGRALNLQFA-SQPTFS--------------FPGDISATERYFYEDIITEPFILEQGTMTVPQGLGI 367 (386)
T ss_dssp TCEEEECCCCCCHHHHHHHHHHH-TSTTCC--------------SCCSCCCGGGTBSCCSBSSCCCEETTEEECCCSSBT
T ss_pred CCeEEECCCcccHHHHHHHHHHH-hCCCCC--------------cccccCchhhhhhhccccCCcEEECCEEECCCCCcC
Confidence 99999999999999999999997 567431 111222 235678888888988874 8999999
Q ss_pred eEEecchhhhhhhcccc
Q 041113 880 EASVAKATHILQNLQIN 896 (983)
Q Consensus 880 Gv~~d~a~~~~~~~~~~ 896 (983)
|+++| ++.++++.+.
T Consensus 368 Gv~~d--~~~l~~~~~~ 382 (386)
T 1wue_A 368 GVTLS--QTNLLKYSQY 382 (386)
T ss_dssp CCCBC--HHHHHHHEEE
T ss_pred CceeC--HHHHhhhhee
Confidence 99999 8888887754
No 41
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=2.5e-57 Score=518.51 Aligned_cols=353 Identities=15% Similarity=0.119 Sum_probs=285.6
Q ss_pred cccCCccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-
Q 041113 485 TISCSLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF- 563 (983)
Q Consensus 485 ~~~~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~- 563 (983)
++.-+|++|||++|+++.++ | .++.++|||+||+|++||||+.+.. .. ..+...++.
T Consensus 15 ~~~~~~~~mkIt~v~~~~~~-----~-------------~~~~v~V~v~td~Gi~G~GE~~~~~-~~---~~~~~~i~~~ 72 (424)
T 3v3w_A 15 TENLYFQSMKIVDAKVIVTC-----P-------------GRNFVTLKIVTDQGIYGIGDATLNG-RE---KSVVSYLEDY 72 (424)
T ss_dssp --------CCEEEEEEEEEC-----S-------------SSCEEEEEEEETTSCEEEEECCCTT-CH---HHHHHHHHHT
T ss_pred ccccCCCCCEEEEEEEEEEc-----C-------------CCCEEEEEEEECCCCEEEEeccCCC-Ch---HHHHHHHHHH
Confidence 45566888999999987652 1 0367899999999999999987542 11 234455655
Q ss_pred HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce
Q 041113 564 LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS 643 (983)
Q Consensus 564 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~ 643 (983)
+.|.|+|+++.+++.++..++ ............+|++|||+|||||+||.+|+|||+||||.. +++
T Consensus 73 l~p~LiG~dp~~ie~i~~~~~-----~~~~~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~ 138 (424)
T 3v3w_A 73 LIPVLIGRDPQQIEDIWQFFY-----RGAYWRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLGGKS---------RER 138 (424)
T ss_dssp HHHHHTTSCTTCHHHHHHHHH-----HHTSSCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHTCCS---------CSS
T ss_pred HHHHhcCCChhhHHHHHHHHH-----hccccCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCcC---------CCc
Confidence 999999999998776664322 111111223467899999999999999999999999999986 578
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC----------------------C---------ChHHHHHHHH
Q 041113 644 IKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARR----------------------A---------DPIKDAEVIQ 692 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~----------------------~---------~~~~d~~~v~ 692 (983)
|++|+++. ..+++++++++++++++||++||+|+|.+ . +++.|+++|+
T Consensus 139 v~~y~~~~-~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~ 217 (424)
T 3v3w_A 139 ILSYTHAN-GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFA 217 (424)
T ss_dssp EEEEEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHH
T ss_pred eeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 99998763 46899999999999999999999999841 0 1467899999
Q ss_pred HHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHH
Q 041113 693 EVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNML 770 (983)
Q Consensus 693 ~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~ 770 (983)
+||+++|+++.|++|+|++||+++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +
T Consensus 218 avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~ 292 (424)
T 3v3w_A 218 AVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTTPLAVGEVFNSIHD-----C 292 (424)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGG-----T
T ss_pred HHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCCCEEEccCcCCHHH-----H
Confidence 999999999999999999999999999999999999999999998 788999999999999999999999875 4
Q ss_pred HhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCC
Q 041113 771 EKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPP 848 (983)
Q Consensus 771 ~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~ 848 (983)
..+++. .+|++++|++++||++++++++++|+++|+++++|++. +|+|++++++||++++||+. . .++
T Consensus 293 ~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~--~---~e~----- 362 (424)
T 3v3w_A 293 RELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGATDLSPVCMGAALHFDYWVPNFG--I---QEH----- 362 (424)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEE--E---EEC-----
T ss_pred HHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCCcccHHHHHHHHHHHHhCCCcc--e---Eee-----
Confidence 555544 47999999999999999999999999999999988887 79999999999999999642 1 111
Q ss_pred CccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 849 VAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 849 ~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
.....+.+|++.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 363 -----~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld--~~~l~~~~~~ 407 (424)
T 3v3w_A 363 -----MAHSEQMNAVFPHAYTFNDGYFTPGEKPGHGVDID--EKLAAQYPYK 407 (424)
T ss_dssp -----CCCCHHHHHHSCBCCEEETTEEECCSSSBTSBCCC--HHHHTTSCCC
T ss_pred -----cCcchhhHhhcCCCceeeCCEEECCCCCCCCcccC--HHHHHhccCC
Confidence 1112234566677888874 999999999999 8888888765
No 42
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=6.3e-57 Score=514.93 Aligned_cols=354 Identities=20% Similarity=0.230 Sum_probs=290.5
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
.|||++|+++.+++| ..|+.++.+.+. ...+.++|||+||+ ++||||+.+. + .+...++.+.|.|+|+
T Consensus 26 ~mkIt~i~~~~v~~p-~~p~~~~~g~~~---~~~~~~~V~v~td~-~~G~GE~~g~----~---~~~~~i~~l~p~LiG~ 93 (445)
T 3va8_A 26 RSIIKEIVITPVAFH-DMPLLNSVGVHE---PFALRSIIEIITED-SYGLGESYGD----S---AHLDRLQKAADKIKGL 93 (445)
T ss_dssp HTBCCEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEECSS-CEEEEEEECC----H---HHHHHHHHHHHHHTTS
T ss_pred CCEEEEEEEEEEecC-CcccccccCccc---CceeEEEEEEEECC-CEEEEecCCc----H---HHHHHHHHHHHHHCCC
Confidence 479999999999999 789888876541 12567899999999 9999998642 2 2345567899999999
Q ss_pred cccccccccccCchhhhh-h---hcCCCCCc------chhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcccccccccc
Q 041113 572 KISYFLPLLKGSFSSWIW-S---TLGIPACE------IFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRS 641 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~------~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~ 641 (983)
++.+++.++..+...... . ..| ..+ ...+|++|||+|||||+||.+|+|||+||||.. +
T Consensus 94 d~~~ie~i~~~l~~~~~~~~~~~~~G--~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~---------r 162 (445)
T 3va8_A 94 SVYSTNVIYQRCVESLRNDTNTGGDG--MGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLGGRV---------R 162 (445)
T ss_dssp BTTCHHHHHHHHHHHTTTCCC--CCS--STTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------S
T ss_pred ChhHHHHHHHHHHHhhhccccccccc--ccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------C
Confidence 999877766432211000 0 011 111 456899999999999999999999999999975 5
Q ss_pred ceeEEEEeec---------------CCCCHHHHHHHHHHhhhc-CCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEE
Q 041113 642 TSIKICALID---------------SNKSPVEVASIATTLVEE-GFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELR 705 (983)
Q Consensus 642 ~~i~~~~~~~---------------~~~~~~~~~~~~~~~~~~-G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~ 705 (983)
++|++|+++. ...+++++++++++++++ ||++||+|+|. .++++|+++|++||+++ |++.|+
T Consensus 163 ~~v~~~a~~~y~~~~~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~-~~~~~Di~~v~avRea~-~~~~L~ 240 (445)
T 3va8_A 163 DSVQYSAYLFYKWGGHPGDEDDEYGPALDPEGVVKQAKKIIDEYGFKAIKLKGGV-FPPADEVAAIKALHKAF-PGVPLR 240 (445)
T ss_dssp SEEEBCEEEECBCSSSTTSCCCTTCCBCSHHHHHHHHHHHHHHHCCSCEEEECSS-SCHHHHHHHHHHHHHHS-TTCCEE
T ss_pred CeEEEeeeecccccccccccccccccCCCHHHHHHHHHHHHHhcCCCEEEEccCC-CCHHHHHHHHHHHHHhC-CCCcEe
Confidence 7888865431 116899999999999875 99999999997 37899999999999999 999999
Q ss_pred EEcCCCCCHHHHHHHHhhcccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEc
Q 041113 706 VDANRNWTYQEALEFGFLIKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIK 784 (983)
Q Consensus 706 vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k 784 (983)
||+|++|++++|+++++.|+++ +.|||||+++++++++|++++++|||+||++++..+ +..+++. .+|++|+|
T Consensus 241 vDaN~~w~~~~Ai~~~~~L~~~-l~~iEeP~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~div~~d 314 (445)
T 3va8_A 241 LDPNAAWTVETSKWVAKELEGI-VEYLEDPAGEIEGMAAVAKEASMPLATNMAVVAFDH-----LPPSILQDAVQVILSD 314 (445)
T ss_dssp EECTTCBCHHHHHHHHHHTTTT-CSEEESCBSHHHHHHHHHTTCSSCEEESSSCCSGGG-----HHHHHHTTCCSEEEEC
T ss_pred eeCCCCCCHHHHHHHHHHHhhh-cCeEeecCcCHHHHHHHHHcCCCCEEeCCccCCHHH-----HHHHHHcCCCCEEEec
Confidence 9999999999999999999999 999999999899999999999999999999999875 5555554 47999999
Q ss_pred CCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhccc--c
Q 041113 785 PSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLK--E 861 (983)
Q Consensus 785 ~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~--~ 861 (983)
++++|||+++++++++|+++|+++++|++.+++|++++++||++++||+. + . ++. ..|+. +
T Consensus 315 ~~~~GGitea~kia~lA~~~gv~v~~h~~~e~~I~~aa~~hlaaa~p~~~----------~----~--~d~~~~~~~~~~ 378 (445)
T 3va8_A 315 HHFWGGLRKSQTLASICATWGLRLSMHSNSHLGISLAAMTHLASATPNLD----------Y----A--CDTHWPWKRRDE 378 (445)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHHHTCTTBC----------S----C--BCCCGGGSCTTC
T ss_pred chhcCCHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHhCCCCc----------e----e--eeccchhhhccc
Confidence 99999999999999999999999999999999999999999999999641 1 1 122 23444 3
Q ss_pred cCC-CCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 862 DVT-TDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 862 d~~-~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
|++ .+|+.+++ +|++|||||++| ++.++++.
T Consensus 379 d~~~~~~~~~~~G~i~vp~~PGLGveld--~~~l~~~~ 414 (445)
T 3va8_A 379 DVVIEGALKWKDGGVIVPSGPGLGVELD--RERLAKLH 414 (445)
T ss_dssp CSBCTTSCCEETTEEECCCSSBTSCCBC--HHHHHHHH
T ss_pred ccccCCCceEECCEEECCCCCcCCCccC--HHHHHHHH
Confidence 554 56888874 999999999999 77776654
No 43
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=1.4e-57 Score=516.90 Aligned_cols=357 Identities=14% Similarity=0.148 Sum_probs=284.4
Q ss_pred ccCCccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH--
Q 041113 486 ISCSLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-- 563 (983)
Q Consensus 486 ~~~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-- 563 (983)
.++++ +|||++|+++.+++|+ .. +.++.++|||+||+|++||||+.+.+ +. +...+..
T Consensus 4 ~~~~~-~mkI~~i~~~~v~~p~------~~-------~~~~~~~V~v~td~G~~G~GE~~~~~---~~---~~~~~~~~~ 63 (394)
T 3mkc_A 4 ALNPA-VAPIKSIEFIPVNYQA------SN-------WSQNTVVVKVTDENGVYGLGEADGSP---DA---ILAYANIET 63 (394)
T ss_dssp CCCTT-CCCEEEEEEEEEEEC-----------------CEEEEEEEEEETTSCEEEEEECSCH---HH---HHHHHTCCC
T ss_pred ccCCC-CCeEEEEEEEEEecCC------CC-------CCccEEEEEEEECCCCeEEEEecCcH---HH---HHHHHhccc
Confidence 34443 4899999999999987 11 23789999999999999999997542 11 1222222
Q ss_pred -------HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccc
Q 041113 564 -------LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEE 636 (983)
Q Consensus 564 -------~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~ 636 (983)
+.|.|+|+++.+++.++..++....+. + ..+...+|++|||+|||||+||.+|+|||+||||..
T Consensus 64 ~~~~~~~l~p~liG~dp~~~e~~~~~l~~~~~~~--g--~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~----- 134 (394)
T 3mkc_A 64 EHKWLTNITEKAIGRLPIEINAIWDAMYDATQWQ--G--MRGLGMFALSGIDMALYDLAGKQLGVPAYQLLGGTN----- 134 (394)
T ss_dssp CBTTBCCTTTTTTTSCTTCHHHHHHHHHHHTHHH--H--SSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS-----
T ss_pred chhhHHHHHHHhCCCChhHHHHHHHHHHHhhhhc--C--CchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCc-----
Confidence 789999999988776664332211111 1 123467899999999999999999999999999986
Q ss_pred cccccceeEEEEeecC----CCCHH----HHHHHHHHhhhcCCCEEEE-eccCC-CChHHHHHHHHHHHHHcCCCcEEEE
Q 041113 637 ISKRSTSIKICALIDS----NKSPV----EVASIATTLVEEGFTAIKL-KVARR-ADPIKDAEVIQEVRKKVGHRIELRV 706 (983)
Q Consensus 637 ~~~~~~~i~~~~~~~~----~~~~~----~~~~~~~~~~~~G~~~~Ki-Kig~~-~~~~~d~~~v~~vr~~~g~~~~l~v 706 (983)
+++|++|+++.. ..+++ ++.+++++++++||++||+ |+|.. .++++|+++|++||+++|+++.|++
T Consensus 135 ----r~~v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~v 210 (394)
T 3mkc_A 135 ----KDKVHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMV 210 (394)
T ss_dssp ----CSEECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred ----CCeeEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 578999988641 22345 6777899999999999999 99931 2689999999999999999999999
Q ss_pred EcCCCC-CHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEE
Q 041113 707 DANRNW-TYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIV 782 (983)
Q Consensus 707 DaN~~~-~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~ 782 (983)
|+|++| +.++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|+++
T Consensus 211 DaN~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~~~d~v~ 285 (394)
T 3mkc_A 211 DYLYRFTDWYEVARLLNSIEDLELYFAEATLQHDDLSGHAKLVENTRSRICGAEMSTTRFE-----AEEWITKGKVHLLQ 285 (394)
T ss_dssp ECTTCCCCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHCSSCBEECTTCCHHHH-----HHHHHHTTCCSEEC
T ss_pred eCCCCCCCHHHHHHHHHHhhhcCCeEEECCCCchhHHHHHHHHhhCCCCEEeCCCCCCHHH-----HHHHHHcCCCCeEe
Confidence 999999 9999999999999999999999998 788999999999999999999998753 6666654 479999
Q ss_pred EcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccccc
Q 041113 783 IKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKED 862 (983)
Q Consensus 783 ~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 862 (983)
+|++++||++++++++++|+++|++++.|+ ++++|++++++||++++||+. . .+++. .. + ...++.+|
T Consensus 286 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~s~i~~aa~~hlaaa~p~~~--~---~e~~~--~~---~-~~~~~~~~ 353 (394)
T 3mkc_A 286 SDYNRCGGLTELRRITEMATANNVQVMPHN-WKTGITSAAAIHYQFAVGNAP--Y---FEYVH--PE---F-CDGELRKY 353 (394)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHTTCEECCCC-CSCHHHHHHHHHHHHHTCCSS--C---CEECC--GG---G-CCCHHHHH
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeecC-CCcHHHHHHHHHHHHhCCCce--e---EEeec--cc---c-ccchhHHh
Confidence 999999999999999999999999987655 699999999999999999641 1 11100 00 0 01234567
Q ss_pred CCCCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 863 VTTDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 863 ~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
++.+|+.+++ +|++|||||++| ++.+++++
T Consensus 354 ~~~~~~~~~~G~i~~p~~PGlGve~d--~~~l~~~~ 387 (394)
T 3mkc_A 354 LVTPEAELVDGGFAKPTAPGLGIDLN--QEFLASLE 387 (394)
T ss_dssp SEECCCCCBTTBEECCCSSBTCCEEC--HHHHHTC-
T ss_pred hccCCCcccCCEEECCCCCCCCceeC--HHHHHhhh
Confidence 7778888874 999999999999 88887776
No 44
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=4e-57 Score=511.82 Aligned_cols=346 Identities=25% Similarity=0.330 Sum_probs=299.6
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHH-HHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+.+ +++++...+...++. +.|.|+|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~l~~~l~~~l~g 76 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTV----YTAESVIVRITYDSGAVGWGEAPPTLVITGDSMDSIESAIHHVLKPALLG 76 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEEccccCCEEecCeeE----EEeeEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 69999999999999999999888654 45889999999999999999998865 356677777777877 9999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.++..++.. ++..+ ...++|++|||+||||++||.+|+|||+||||. +++|++|+++
T Consensus 77 ~~~~~~~~~~~~-----l~~~~-----~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~----------~~~v~~~~~~ 136 (366)
T 1tkk_A 77 KSLAGYEAILHD-----IQHLL-----TGNMSAKAAVEMALYDGWAQMCGLPLYQMLGGY----------RDTLETDYTV 136 (366)
T ss_dssp CBGGGHHHHHHH-----HHHSS-----SSCHHHHHHHHHHHHHHHHHHTTSBHHHHHTCC----------CSEEEBCEEE
T ss_pred CCcccHHHHHHH-----HHHHh-----cCCHHHHHHHHHHHHHHHHHHcCCCHHHHhCCC----------CCceeeeEEe
Confidence 998876555431 11111 124689999999999999999999999999994 3679988877
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc--CC
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD--CD 728 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~--~~ 728 (983)
+ ..+++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++||.++|+++++.|++ ++
T Consensus 137 ~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~ 214 (366)
T 1tkk_A 137 S-VNSPEEMAADAENYLKQGFQTLKIKVGK-DDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLG 214 (366)
T ss_dssp C-SCCHHHHHHHHHHHHHHTCCEEEEECCS-SCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCC
T ss_pred c-CCCHHHHHHHHHHHHHcCCCeEEEEeCC-CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 4 4689999999999999999999999996 378999999999999999999999999999999999999999999 99
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++++|++++||++++++++++|+++|
T Consensus 215 i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 289 (366)
T 1tkk_A 215 IELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTPRQ-----AFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACG 289 (366)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHH-----HHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred ceEEECCCCcccHHHHHHHHhhCCCCEEEcCCCCCHHH-----HHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcC
Confidence 999999998 788999999999999999999988653 555554 457999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEA 881 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv 881 (983)
+++++||++||++++++++|++++++|+. .+++++..++.+|++.+|+.+++ +|++||||+
T Consensus 290 ~~~~~~~~~es~i~~~a~~~laaa~~~~~---------------~~el~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv 354 (366)
T 1tkk_A 290 VECMVGSMIETKLGITAAAHFAASKRNIT---------------RFDFDAPLMLKTDVFNGGITYSGSTISMPGKPGLGI 354 (366)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHCTTEE---------------EECCCGGGGBSSCCEEESCEEETTEEECCCSSBTCE
T ss_pred CcEEecCccccHHHHHHHHHHHHcCCCCc---------------eecccchhhcccccccCCceEECCEEECCCCCccce
Confidence 99999999999999999999999998641 12344555677888778888873 899999999
Q ss_pred Eec
Q 041113 882 SVA 884 (983)
Q Consensus 882 ~~d 884 (983)
++|
T Consensus 355 ~~d 357 (366)
T 1tkk_A 355 IGA 357 (366)
T ss_dssp EEE
T ss_pred Eec
Confidence 999
No 45
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=4.5e-57 Score=515.42 Aligned_cols=349 Identities=14% Similarity=0.138 Sum_probs=285.7
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l 568 (983)
|+.|||++|+++.++ | + ..+.++|||+||+|++||||+.+.. .. ..+...++. +.|.|
T Consensus 24 ~~~mkIt~v~~~~~~-----~-----~-------~~~~v~V~v~td~Gi~G~GE~~~~~-~~---~~~~~~i~~~l~p~L 82 (422)
T 3tji_A 24 MTPVIIKNIECFITR-----P-----D-------RHNLVTVRVTTEQGITGHGCATFQQ-RP---LAVKTLVDEYLQPLM 82 (422)
T ss_dssp CCCCBEEEEEEEEEC-----S-----S-------SSCEEEEEEEETTSCCEEEECCCTT-SH---HHHHHHHHHTHHHHH
T ss_pred CCCcEEEEEEEEEEc-----C-----C-------CccEEEEEEEECCCCEEEEeccCCC-CH---HHHHHHHHHHHHHHh
Confidence 345899999987652 1 0 0367899999999999999987643 22 234455655 99999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..++ ............+|++|||||||||+||.+|+|||+||||.. +++|++|+
T Consensus 83 iG~dp~~ie~~~~~l~-----~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~ 148 (422)
T 3tji_A 83 IGRDANNIEDLWQMMN-----VNAYWRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFGGKS---------RDAIPAYS 148 (422)
T ss_dssp TTSBTTCHHHHHHHHH-----HTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------SSCEEEEE
T ss_pred CCCCcccHHHHHHHHH-----HhhhccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCC---------CCeEEEEE
Confidence 9999998776654322 111111223467899999999999999999999999999986 57899998
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC----------------------hHHHHHHHHHHHHHcCCCcEEEE
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRAD----------------------PIKDAEVIQEVRKKVGHRIELRV 706 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~----------------------~~~d~~~v~~vr~~~g~~~~l~v 706 (983)
++. ..+++++++++++++++||++||+|+|.... ++.|+++|++||+++|+++.|++
T Consensus 149 ~~~-~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~v 227 (422)
T 3tji_A 149 HAS-GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILH 227 (422)
T ss_dssp EEE-ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EeC-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 763 4789999999999999999999999986210 46789999999999999999999
Q ss_pred EcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEE
Q 041113 707 DANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVI 783 (983)
Q Consensus 707 DaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~ 783 (983)
|+|++|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+..+ +..+++. .+|++++
T Consensus 228 DaN~~~~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~ll~~ga~d~v~~ 302 (422)
T 3tji_A 228 DVHERLFPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQSCVPLALGELFNNPAE-----WHDLIVNRRIDFIRC 302 (422)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHHCCCCEEECTTCCSGGG-----THHHHHTTCCSEECC
T ss_pred ECCCCCCHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHH-----HHHHHhcCCCCEEec
Confidence 9999999999999999999999999999998 788899999999999999999999875 4555544 5799999
Q ss_pred cCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccccc
Q 041113 784 KPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKED 862 (983)
Q Consensus 784 k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 862 (983)
|++++|||+++++++++|+++|+++++|++. +|+|++++++||++++||+. . .+ + .....+.+|
T Consensus 303 k~~~~GGit~~~kia~lA~a~gv~v~~h~~~~~s~Ig~aA~~hlaaa~pn~~--~---~e--~--------~~~~~~~~~ 367 (422)
T 3tji_A 303 HVSQIGGITPALKLAHLCQAFGVRLAWHGPGDMTPIGVAVNTHLNIHLHNAA--I---QE--F--------IPRSATTND 367 (422)
T ss_dssp CGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHHHCTTBC--C---EE--C--------CCCCHHHHH
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEecCCCCccHHHHHHHHHHHHhCCCCc--e---Ee--c--------cCcchhhhh
Confidence 9999999999999999999999998888775 79999999999999999642 1 11 1 111123456
Q ss_pred CCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 863 VTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 863 ~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
++.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 368 ~~~~~~~~~~G~i~~p~~PGlGve~d--~~~l~~~~~~ 403 (422)
T 3tji_A 368 VFPGAPEVKEGFVYPPVQPGIGVGFN--EALALAHPVL 403 (422)
T ss_dssp HSTTCCCCBTTEECCCCSSBSCCCCC--HHHHHTSCCC
T ss_pred ccCCCceeECCEEECCCCCcCCCCcC--HHHHHhcccc
Confidence 6677777774 999999999999 8888898865
No 46
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.8e-57 Score=512.79 Aligned_cols=356 Identities=19% Similarity=0.208 Sum_probs=304.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++|++.||.++.+.. ..++.++|+|+| +|++||||+.+. + +++++...+...++. +.|.+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~V~v~t-~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l 75 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTV----HKQSYVIVQVKA-GGLVGIGEGGSVGGPTWGSESAETIKVIIDNYLAPLL 75 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEE-TTEEEEEEECCSTTTTTSSCCHHHHHHHHHHTHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEE----EeceeEEEEEEE-CCEEEEEEeccCCCCcccCCCHHHHHHHHHHhhHHHH
Confidence 69999999999999999999888654 348899999999 999999999876 2 456666666666754 88999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.++..++.. +.... ...++|++|||+||||+.||.+|+|||+||||.. +++|++|+
T Consensus 76 ~G~d~~~~~~~~~~-----l~~~~-----~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~v~~~~ 136 (370)
T 1nu5_A 76 VGKDASNLSQARVL-----MDRAV-----TGNLSAKAAIDIALHDLKARALNLSIADLIGGTM---------RTSIPIAW 136 (370)
T ss_dssp TTSBTTCHHHHHHH-----HHHHC-----SSCHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCS---------CSEEEBCE
T ss_pred cCCCcccHHHHHHH-----HHHHh-----cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCc---------CCceEeeE
Confidence 99998876555432 12211 1246899999999999999999999999999975 46799987
Q ss_pred eecCCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 649 LIDSNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
+++ ..+++++.+.++++++ +||++||+|+|.+ +++.|++++++||+++|+++.|++|+|++||.++|+++++.|+++
T Consensus 137 ~~~-~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 214 (370)
T 1nu5_A 137 TLA-SGDTARDIDSALEMIETRRHNRFKVKLGAR-TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEA 214 (370)
T ss_dssp EEC-SSCHHHHHHHHHHHHHTTSCSEEEEECSSS-CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred Eec-CCCHHHHHHHHHHHHHhCCccEEEEecCCC-ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 763 4689999999999999 9999999999973 688999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++.++++++++++||++||++++.. .+..+++. .+|++++|++++||++++++++++|+++
T Consensus 215 ~i~~iEqP~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 289 (370)
T 1nu5_A 215 GVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLS-----SAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAA 289 (370)
T ss_dssp TCCEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHH-----HHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHH
T ss_pred CcceEeCCCCcccHHHHHHHHHhCCCCEEeCCCCCCHH-----HHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHc
Confidence 9999999998 78899999999999999999998865 36666654 4799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++++||++||+|++++++|++++++|+. ..+.++...++.+|++.+|+.+++ +|++||||
T Consensus 290 g~~~~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~e~~~~~~~~~d~~~~~~~~~~G~~~~p~~pGlG 355 (370)
T 1nu5_A 290 GISSYGGTMLDSTVGTAAALHVYATLPSLP--------------YGCELIGPWVLGDRLTQQDLEIKDFEVHLPLGSGLG 355 (370)
T ss_dssp TCEEEECCSSCCHHHHHHHHHHHTTSSCCT--------------TCBCCCHHHHBSSCSBSSCCCEETTEEECCCSSBTS
T ss_pred CCcEEecCCcchHHHHHHHHHHHhcCCCCC--------------cccccCchhhhccccccCCceEECCEEECCCCCCCC
Confidence 999999999999999999999999998631 111233344567888888888874 89999999
Q ss_pred EEecchhhhhhhccc
Q 041113 881 ASVAKATHILQNLQI 895 (983)
Q Consensus 881 v~~d~a~~~~~~~~~ 895 (983)
+++| ++.++++..
T Consensus 356 v~~d--~~~l~~~~~ 368 (370)
T 1nu5_A 356 VDLD--HDKVRHYTR 368 (370)
T ss_dssp CCBC--HHHHHHHBC
T ss_pred ceeC--HHHHhhccc
Confidence 9999 888877653
No 47
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=2.9e-57 Score=513.51 Aligned_cols=355 Identities=19% Similarity=0.253 Sum_probs=304.9
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHH-HHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
|||++|+++.+++|++.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +++++...+...++. +.|.++|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~v~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~i~~~l~~~l~g 76 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSY----SDMPSIIVKMETDEGIIGYGEGVADDHVTGESWESTFHTLKHTLTPALIG 76 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEeccccCCeEecceeE----EeeeEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 69999999999999999999887654 44889999999999999999998764 345666667777777 9999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.++..++.. +.... ...++|++|||+||||+.||.+|+|||+||||.. +++||+|.++
T Consensus 77 ~d~~~~~~~~~~-----l~~~~-----~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~v~~~~~i 137 (369)
T 2p8b_A 77 QNPMNIEKIHDM-----MDNTI-----YGVPTAKAAIDIACFDIMGKKLNQPVYQLIGGRY---------HEEFPVTHVL 137 (369)
T ss_dssp CCTTCHHHHHHH-----HHHHC-----SCCHHHHHHHHHHHHHHHHHHTTSBGGGGTTCCC---------CSCEECCEEE
T ss_pred CCcccHHHHHHH-----HHHHh-----cCChHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCceeeeEEe
Confidence 998876555432 11211 1246899999999999999999999999999974 4678888877
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHH-HHHhhcccCCC
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEAL-EFGFLIKDCDL 729 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~-~~~~~l~~~~i 729 (983)
+ ..+++++.+.+++++++||++||+|+|. +++.|+++|++||+++|+++.|++|+|++|+.++|+ ++++.|+++++
T Consensus 138 ~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 138 S-IADPENMAEEAASMIQKGYQSFKMKVGT--NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp C-SCCHHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred c-CCChHHHHHHHHHHHHcCcCEEEEEeCC--CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 4 4689999999999999999999999996 789999999999999999999999999999999999 99999999999
Q ss_pred ceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCC
Q 041113 730 QYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGK 806 (983)
Q Consensus 730 ~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi 806 (983)
.|||||++ +++.++++++++++||++||++.+.. .+..+++ ..+|++++|++++||++++++++++|+++|+
T Consensus 215 ~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 289 (369)
T 2p8b_A 215 DWIEQPVIADDIDAMAHIRSKTDLPLMIDEGLKSSR-----EMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGI 289 (369)
T ss_dssp SCEECCBCTTCHHHHHHHHHTCCSCEEESTTCCSHH-----HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred cEEECCCCcccHHHHHHHHHhCCCCEEeCCCCCCHH-----HHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCC
Confidence 99999998 78889999999999999999998865 3555555 4579999999999999999999999999999
Q ss_pred cEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEE
Q 041113 807 MAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEAS 882 (983)
Q Consensus 807 ~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~ 882 (983)
++++||++||++++++++|++++++|+. .+++++..++.+| .+|+.+++ +|++||||++
T Consensus 290 ~~~~~~~~es~i~~~a~~~laa~~~~~~---------------~~el~~~~~~~~~--~~~~~~~~G~~~~p~~PGlGv~ 352 (369)
T 2p8b_A 290 ECQVGSMVESSVASSAGFHVAFSKKIIT---------------SVELTGPLKFTKD--IGNLHYDVPFIRLNEKPGLGIE 352 (369)
T ss_dssp EEEECCSSCCHHHHHHHHHHHTTCTTEE---------------EECCCHHHHBSCC--SSCCCCBTTEECCCCCSBTCCC
T ss_pred cEEecCCCccHHHHHHHHHHHHcCCCCc---------------eeccCcchhcccc--CCCceeECCEEeCCCCCcCCCc
Confidence 9999999999999999999999998641 1224455566666 57787773 8999999999
Q ss_pred ecchhhhhhhccccc
Q 041113 883 VAKATHILQNLQINN 897 (983)
Q Consensus 883 ~d~a~~~~~~~~~~~ 897 (983)
+| ++.++++++..
T Consensus 353 ~d--~~~l~~~~~~~ 365 (369)
T 2p8b_A 353 IN--EDTLQELTVFQ 365 (369)
T ss_dssp CC--HHHHHHHEEEE
T ss_pred cC--HHHHhhceeee
Confidence 99 88888887654
No 48
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=9.6e-57 Score=513.08 Aligned_cols=360 Identities=17% Similarity=0.200 Sum_probs=300.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC--cCcccHHHHHHHHHH-HHh-Hh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE--IHKENLLDAEEQLRF-LLH-FM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~--~~~~~~~~~~~~l~~-~~~-~l 568 (983)
|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+.+ +++++...+...++. +.| .|
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~~l~~~~l 78 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATL----ARIDGVLLKLHSDEGLVGIADAGDTSSWYRGETQDSITSMICDFFAPKVL 78 (397)
T ss_dssp CCEEEEEEEEEEECCCC---------------EEEEEEEEEETTSCEEEEECCCCCTTTTCCCHHHHHHHHHHTHHHHTT
T ss_pred CEEEEEEEEEEeeeccCCeEeccceE----eeCceEEEEEEECCCCEEEEEEecccCccCCCCHHHHHHHHHHhhhhHhh
Confidence 89999999999999999999988754 34889999999999999999998875 356777667777776 899 99
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.++..++..+ .... .+ .++|++|||+||||++||.+|+|||+||||.. +++||+|+
T Consensus 79 ~G~d~~~~~~l~~~l-----~~~~----~~-~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~---------~~~vp~~~ 139 (397)
T 2qde_A 79 LGEDPTKIEKIVGRM-----DILT----RD-NNQAKATVDFALHDLVGKRFGVPVYQLLGGKT---------IERIPLGL 139 (397)
T ss_dssp TTCCTTCHHHHHHHH-----HHHC----SS-CHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSSEEBCE
T ss_pred cCCChHhHHHHHHHh-----hhhh----cc-chhHHHHHHHHHHHHHHHHhCCcHHHHhCCCC---------CCCcceEE
Confidence 999988765544321 1111 11 57899999999999999999999999999975 46899998
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+++ ..+++++.+.+++++++||++||+|+|. +++.|+++|++||+++|+++.|++|+|++||.++|+++++.|++++
T Consensus 140 ~~g-~~~~e~~~~~a~~~~~~Gf~~vKik~g~--~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (397)
T 2qde_A 140 VLG-AGEPEAVAEEALAVLREGFHFVKLKAGG--PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYN 216 (397)
T ss_dssp ECC-CSCHHHHHHHHHHHHHHTCSCEEEECCS--CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred ECC-CCCHHHHHHHHHHHHHhhhhheeecccC--CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 763 3689999999999999999999999996 7899999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++.+.. .+..+++ ..+|++++|++++||++++++++++|+++|
T Consensus 217 i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 291 (397)
T 2qde_A 217 LSKIEQPLPAWDLDGMARLRGKVATPIYADESAQELH-----DLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLAN 291 (397)
T ss_dssp CSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHH-----HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred CCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHH-----HHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcC
Confidence 999999998 78899999999999999999999865 3566555 457999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhch------hhh-hhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cC
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLE------LQN-AYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NS 874 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~------~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P 874 (983)
+++++|++++++|++++++|++++++ |.. +.+ . .+.+++..++.+|++.+|+.+++ +|
T Consensus 292 ~~~~~~~~~es~ig~aa~~hlaa~~~~~~~~~~~~~~~~---~--------~~d~~~~~~~~~d~~~~~~~~~~G~~~~p 360 (397)
T 2qde_A 292 LPVICGCMVGSGLEASPAAHLLAANDWIAQFPQENAGPL---H--------IHDCLNSRDIDNDIALNVPRFEGGYLYPN 360 (397)
T ss_dssp CCEEECCCSCCHHHHHHHHHHHHHCTTGGGSCBCCCHHH---H--------HTTCSSGGGCCCCSBTTCCEEETTEEECC
T ss_pred CeEEEecCcccHHHHHHHHHHHHhCCcccccccccccce---e--------eeecCCchhhhhccccCCceEECCEEECC
Confidence 99999999999999999999999987 410 001 0 12234555678888888998884 89
Q ss_pred CCCeeeEEecchhhhhhhcccc
Q 041113 875 CRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 875 ~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
++||||+++| ++.++++...
T Consensus 361 ~~PGlGv~~d--~~~l~~~~~~ 380 (397)
T 2qde_A 361 DGPGLGIELN--EDLVRRLVTP 380 (397)
T ss_dssp CSSBTCCCBC--HHHHHHHBCT
T ss_pred CCCcCCcccC--HHHHhhhccc
Confidence 9999999999 8888888754
No 49
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.4e-57 Score=516.40 Aligned_cols=353 Identities=21% Similarity=0.283 Sum_probs=296.5
Q ss_pred cceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHH-HHh
Q 041113 491 SICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRF-LLH 566 (983)
Q Consensus 491 ~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~-~~~ 566 (983)
.+|||++|+++.+++|++.||.++.+.. ..++.++|+|+|++|++||||+.+.+ +.+++...+...++. +.|
T Consensus 18 ~~mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~v~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p 93 (393)
T 1wuf_A 18 SHMYFQKARLIHAELPLLAPFKTSYGEL----KSKDFYIIELINEEGIHGYGELEAFPLPDYTEETLSSAILIIKEQLLP 93 (393)
T ss_dssp -CEECCEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEECSSSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTTHH
T ss_pred CcCEEEEEEEEEEeeeccCCeEecceeE----ecCcEEEEEEEECCCCEEEEEeecCCCCcccCCCHHHHHHHHHHHHHH
Confidence 3489999999999999999999888754 44889999999999999999998642 446676666666665 789
Q ss_pred HhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 567 FMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 567 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
.|+|+++.+...++. .+.. ....++|++|||+||||++||.+|+|||+||||. +++||+
T Consensus 94 ~l~G~d~~~~~~l~~---------~l~~--~~g~~~a~~aid~AlwDl~gk~~g~Pl~~lLGg~----------~~~v~~ 152 (393)
T 1wuf_A 94 LLAQRKIRKPEEIQE---------LFSW--IQGNEMAKAAVELAVWDAFAKMEKRSLAKMIGAT----------KESIKV 152 (393)
T ss_dssp HHHHCEESSTTHHHH---------HHTT--SCSCHHHHHHHHHHHHHHHHHHTTSBHHHHTTCC----------CSEEEB
T ss_pred HHcCCCccCHHHHHH---------HHHH--ccCchHHHHHHHHHHHHHHHHHhCCcHHHHhCCC----------CCccee
Confidence 999998776544332 1110 0124789999999999999999999999999994 367999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD 726 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 726 (983)
|++++...+++++.+++++++++||++||+|+| +++|+++|++||+++ +++.|++|+|++|++++| ++++.|++
T Consensus 153 ~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg----~~~d~~~v~avr~a~-~~~~l~vDaN~~~~~~~a-~~~~~l~~ 226 (393)
T 1wuf_A 153 GVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA----PNKDIQFVEAVRKSF-PKLSLMADANSAYNREDF-LLLKELDQ 226 (393)
T ss_dssp CEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB----TTBSHHHHHHHHTTC-TTSEEEEECTTCCCGGGH-HHHHTTGG
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC----hHHHHHHHHHHHHHc-CCCEEEEECCCCCCHHHH-HHHHHHHh
Confidence 988753446999999999999999999999997 357899999999999 899999999999999999 99999999
Q ss_pred CCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 727 CDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 727 ~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
+++.|||||++ |++++++|++++++||++||++++.. .+..+++.+ +|++|+|++++||++++++++++|++
T Consensus 227 ~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~ 301 (393)
T 1wuf_A 227 YDLEMIEQPFGTKDFVDHAWLQKQLKTRICLDENIRSVK-----DVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCAL 301 (393)
T ss_dssp GTCSEEECCSCSSCSHHHHHHHTTCSSEEEECTTCCSHH-----HHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCcCHHHHHHHHHhCCCCEEECCCcCCHH-----HHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHH
Confidence 99999999998 78999999999999999999998875 366665544 79999999999999999999999999
Q ss_pred cCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCceeec----cCCCCe
Q 041113 804 HGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPISICH----NSCRGF 878 (983)
Q Consensus 804 ~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~~~~----~P~~pG 878 (983)
+|++++++|++||+|+.++++|++ +++|. ..+++++. ..++.+|++.+|+.+++ +|++||
T Consensus 302 ~gi~~~~~~~~es~i~~aa~~hla-a~~~~--------------~~~~~l~~~~~~~~~d~~~~~~~~~~G~i~~p~~PG 366 (393)
T 1wuf_A 302 NEILVWCGGMLEAGVGRAHNIALA-ARNEF--------------VFPGDISASNRFFAEDIVTPAFELNQGRLKVPTNEG 366 (393)
T ss_dssp TTCEEEECCCCCCHHHHHHHHHHH-TSSSC--------------CSCBSCCCGGGTBSSCSBSSCCCCCSSEEECCCSSB
T ss_pred cCCeEEecCCcccHHHHHHHHHHH-hCCCC--------------CcccccCchhhhhhhhcccCCcEEECCEEECCCCCc
Confidence 999999999999999999999997 56642 11122332 34678888888888874 899999
Q ss_pred eeEEecchhhhhhhcccc
Q 041113 879 VEASVAKATHILQNLQIN 896 (983)
Q Consensus 879 lGv~~d~a~~~~~~~~~~ 896 (983)
||+++| ++.++++...
T Consensus 367 lGv~~d--~~~l~~~~~~ 382 (393)
T 1wuf_A 367 IGVTLD--LKVLKKYTKS 382 (393)
T ss_dssp TSCCBC--HHHHHTTEEE
T ss_pred CCCccC--HHHHhhhcee
Confidence 999999 8888777654
No 50
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=6.1e-57 Score=510.02 Aligned_cols=337 Identities=13% Similarity=0.125 Sum_probs=278.7
Q ss_pred ceeEeEEEEEEEEeeCCCCCccc--cccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSS--YIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~--~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~ 569 (983)
+|||++|+++.+++|++.||.++ .+.+ ...++.++|+|+|| |++||||+.+.. +.+.|.|+
T Consensus 11 ~mkI~~i~~~~v~~pl~~~f~~s~~~g~~---~~~~~~~~V~i~td-G~~G~GE~~~~~-------------~~l~~~li 73 (392)
T 3v5c_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVH---GKSCTVDIARITID-GQTGYGSSIHMT-------------PEWAEDVI 73 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCC---EEEEEEEEEEEEET-TEEEEEECCSCC-------------HHHHHTTT
T ss_pred CcEEEEEEEEEEeeecCcccccccccCcc---CCCceeEEEEEEEc-CCEEEEeecCcH-------------HHHHHHhC
Confidence 48999999999999999999964 5443 12378999999999 999999998642 24678899
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccce-----e
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTS-----I 644 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~-----i 644 (983)
|+++.++... ......+|++|||+|||||+||.+|+|||+||||.. +++ |
T Consensus 74 G~d~~~~~~~----------------~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~~~~v~v 128 (392)
T 3v5c_A 74 GRRLLDLFDD----------------RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAH---------LETGASLVV 128 (392)
T ss_dssp TCBGGGGBCT----------------TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHSCCC---------SCCCCCEEE
T ss_pred CCCHHHHHhh----------------ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCC---------CcccccceE
Confidence 9988754210 113457899999999999999999999999999986 455 8
Q ss_pred EEEEeecCC------C---CHHHHHHHHHHhhhcCCCEEEEeccCCC-------ChHHHHHHHHHHHHHcCCCcEEEEEc
Q 041113 645 KICALIDSN------K---SPVEVASIATTLVEEGFTAIKLKVARRA-------DPIKDAEVIQEVRKKVGHRIELRVDA 708 (983)
Q Consensus 645 ~~~~~~~~~------~---~~~~~~~~~~~~~~~G~~~~KiKig~~~-------~~~~d~~~v~~vr~~~g~~~~l~vDa 708 (983)
++|++.... . +++++++++++++++||++||+|+|... ++++|+++|++||+++||++.|++|+
T Consensus 129 ~~y~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDa 208 (392)
T 3v5c_A 129 PCYDTSLYFDDLHLADERAAVALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDA 208 (392)
T ss_dssp EEEEEEECBTTTTCCCHHHHHHHHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred EEEEeecccccccccccccCHHHHHHHHHHHHHCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHHcCCCCcEEeeC
Confidence 988754221 1 3578899999999999999999999621 26899999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcccCCCceeecCCC-ChHHHHHHHhh-----cCCcEEeCCCccCcCCChHHHHHhhcCC-CceEE
Q 041113 709 NRNWTYQEALEFGFLIKDCDLQYIEEPVQ-NEEDIIKYCEE-----SGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAI 781 (983)
Q Consensus 709 N~~~~~~~a~~~~~~l~~~~i~~iEeP~~-~~~~~~~l~~~-----~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i 781 (983)
|++||+++|+++++.|+++++.|||||++ +.+++++|+++ +++|||+||+++ ..+ +..+++. .+|++
T Consensus 209 N~~w~~~~A~~~~~~L~~~~l~~iEeP~~~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~-----~~~li~~~a~dii 282 (392)
T 3v5c_A 209 NNAYNLNLTKEVLAALSDVNLYWLEAAFHEDEALYEDLKEWLGQRGQNVLIADGEGLA-SPH-----LIEWATRGRVDVL 282 (392)
T ss_dssp TTCCCHHHHHHHHHHTTTSCCCEEECSSSCCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTT-----HHHHHHTTSCCEE
T ss_pred CCCcCHHHHHHHHHhcccCCCeEEeCCCCcCHHHHHHHHHhhccCCCCCcEECCCccc-HHH-----HHHHHHcCCCcEE
Confidence 99999999999999999999999999999 78899999875 789999999999 664 4555554 47999
Q ss_pred EEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccc
Q 041113 782 VIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKE 861 (983)
Q Consensus 782 ~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 861 (983)
|+|+++ |||+++++++++|+++|++++.|+ ++++|++++++||++++||+. . .+ ++ .++..
T Consensus 283 ~~d~~~-GGitea~kia~~A~~~gv~~~~h~-~~s~i~~aa~~hlaaa~p~~~--~---~e----------~~--~~~~~ 343 (392)
T 3v5c_A 283 QYDIIW-PGFTHWMELGEKLDAHGLRSAPHC-YGNAYGIYASGHLSAAVRNFE--F---VE----------YD--DITIE 343 (392)
T ss_dssp CCBTTT-BCHHHHHHHHHHHHHTTCEECCBC-CSCTHHHHHHHHHGGGCTTBC--C---EE----------EC--CEEET
T ss_pred EeCCCC-CCHHHHHHHHHHHHHcCCeEEecC-CCcHHHHHHHHHHHHhCCCCc--e---Ee----------cc--cchhh
Confidence 999999 999999999999999999987665 599999999999999999641 1 11 11 12334
Q ss_pred cCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 862 DVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 862 d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
++..+++.+++ +|++|||||++| ++.++++....
T Consensus 344 ~~~~~~~~~~~G~i~vp~~PGlGve~d--~~~l~~~~~~~ 381 (392)
T 3v5c_A 344 GMDVSGYRIENGEIHVPATPGFGIVFD--DELVTYLINRS 381 (392)
T ss_dssp TEECTTCEEETTEEEECCSSBTSCEEC--HHHHHHHHHHT
T ss_pred hccCCCCeeECCEEECCCCCCCCccCC--HHHHHhhhccC
Confidence 55567888874 999999999999 88888877554
No 51
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=2.7e-56 Score=506.67 Aligned_cols=357 Identities=13% Similarity=0.136 Sum_probs=304.6
Q ss_pred eeEeEEEEEEEEeeCCC-CCcccccc-ccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHhHh
Q 041113 493 CKICRMEYSLYRIQLCA-PPTSSYID-HNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~-p~~~~~~~-~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~~l 568 (983)
|||++|+++.+++|++. ||.++.+. . ..++.++|+|+|++|.+||||+.+. + ++.++...+...++.++|.|
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~l~~~l 78 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAI----TVARASVVVIDTDAGLQGCGEFTPCGENYMIAHSEGVDAFARLAAPQL 78 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEEC----SEEEEEEEEEEETTSCEEEEEEBCSSTTSSSCCTTHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceee----cccceEEEEEEECCCCEEEEEeecCCCCcCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999999 99988764 3 3488999999999999999999875 3 45566556667777889999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..+ .... .+ .++|++|||+||||+.||.+|+|||+||||.. +++||+|+
T Consensus 79 ~g~d~~~~~~~~~~l-----~~~~----~g-~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~v~~~~ 139 (379)
T 2rdx_A 79 LGQDPRQVARMERLM-----DHLV----QG-HGYAKAPFDAAFWDILGQATGQPVWMLLGGKL---------CDGAPMYR 139 (379)
T ss_dssp TTSCTTCHHHHHHHH-----HHHS----SS-CHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCC---------CSSEEBCE
T ss_pred cCCChhhHHHHHHHH-----HHHh----cc-cHHHHHHHHHHHHHHhHHHhCCCHHHHcCCCC---------CCceeEEE
Confidence 999988765554321 1111 12 57899999999999999999999999999975 46899998
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+++ ..+++++.+.+++++++||+.||+|+|. +++.|+++|++||+++|+++.|++|+|++||.++|+++++.|++++
T Consensus 140 ~~~-~~~~~~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (379)
T 2rdx_A 140 VAP-QRSEAETRAELARHRAAGYRQFQIKVGA--DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLD 216 (379)
T ss_dssp ECC-CSCSHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSC
T ss_pred Eec-CCCHHHHHHHHHHHHHcCCCEEEEeccC--CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 874 3688999999999999999999999996 7899999999999999999999999999999999999999999999
Q ss_pred CceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 729 LQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 729 i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
+ |||||+++++.++++++++++||++||++.+.. .+..+++ ..+|++++|++++||++++++++++|+++|++
T Consensus 217 i-~iE~P~~~~~~~~~l~~~~~iPI~~de~i~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 290 (379)
T 2rdx_A 217 Y-ILEQPCRSYEECQQVRRVADQPMKLDECVTGLH-----MAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMP 290 (379)
T ss_dssp C-EEECCSSSHHHHHHHHTTCCSCEEECTTCCSHH-----HHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCC
T ss_pred e-EEeCCcCCHHHHHHHHhhCCCCEEEeCCcCCHH-----HHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCe
Confidence 9 999999989999999999999999999998865 3555554 45899999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEe
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASV 883 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~ 883 (983)
+++|+++||++++++++|++++++|+. + .++++..+++.+|++.+|+.+++ +|++||||+++
T Consensus 291 ~~~~~~~es~i~~~a~~~laaa~~~~~--~------------~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~ 356 (379)
T 2rdx_A 291 VVAEDSWGGEIASAAVAHFAASTPEEF--L------------INSTDLMNYNTRSTGLGGPTVHQGRLYASDTPGLGVTP 356 (379)
T ss_dssp EEEECSBCSHHHHHHHHHHHHTSCTTT--E------------EEECCGGGGBSSCSEEECCEEETTEEECCCSSBTSEEE
T ss_pred EEEeeccCcHHHHHHHHHHHHcCCCcc--c------------cccccccchhhhccccCCceEECCEEEcCCCCcCCeee
Confidence 999999999999999999999998631 1 11122233567788777888874 89999999999
Q ss_pred cchhhhhhhccccc
Q 041113 884 AKATHILQNLQINN 897 (983)
Q Consensus 884 d~a~~~~~~~~~~~ 897 (983)
| ++.++++....
T Consensus 357 d--~~~l~~~~~~~ 368 (379)
T 2rdx_A 357 D--FNSLGAPVADW 368 (379)
T ss_dssp C--HHHHCSCSEEE
T ss_pred C--HHHHhcceeee
Confidence 9 88877766543
No 52
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=9e-57 Score=513.58 Aligned_cols=348 Identities=14% Similarity=0.120 Sum_probs=286.8
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l 568 (983)
++.|||++|+++.++ | .++.++|||+||+|++||||+.+.. .. ..+...++. +.|.|
T Consensus 14 ~~~mkIt~v~~~~~~-----~-------------~~~~~~V~v~td~G~~G~GE~~~~~-~~---~~~~~~i~~~l~p~L 71 (418)
T 3r4e_A 14 GSHMKITAARVIITC-----P-------------GRNFVTLKIETDQGVYGIGDATLNG-RE---LSVVAYLQEHVAPCL 71 (418)
T ss_dssp TCCCCEEEEEEEEEC-----S-------------SSCEEEEEEEETTSCEEEEECCCTT-CH---HHHHHHHHHTHHHHH
T ss_pred CCCCEEEEEEEEEEc-----C-------------CCcEEEEEEEECCCCEEEEeccCCC-Ch---HHHHHHHHHHHHHHh
Confidence 355899999987652 1 1467899999999999999987543 12 234455655 99999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..++ ............+|++|||||||||+||.+|+|||+||||.. +++|++|+
T Consensus 72 iG~dp~~ie~l~~~~~-----~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~ 137 (418)
T 3r4e_A 72 IGMDPRRIEDIWQYVY-----RGAYWRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLGGRS---------RDGIMVYG 137 (418)
T ss_dssp TTSCTTCHHHHHHHHH-----HHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCS---------CSSEEEEE
T ss_pred cCCChhhHHHHHHHHH-----HhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCcc---------CCeeeEEE
Confidence 9999998776664322 111111223467899999999999999999999999999986 57899998
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCC-------------------------------ChHHHHHHHHHHHHH
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRA-------------------------------DPIKDAEVIQEVRKK 697 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~-------------------------------~~~~d~~~v~~vr~~ 697 (983)
++. ..+++++++++++++++||++||+|+|.+. +++.|+++|++||++
T Consensus 138 ~~~-~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a 216 (418)
T 3r4e_A 138 HAN-GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKT 216 (418)
T ss_dssp EEE-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHH
T ss_pred eCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 863 568999999999999999999999998520 146789999999999
Q ss_pred cCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC
Q 041113 698 VGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH 775 (983)
Q Consensus 698 ~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~ 775 (983)
+|+++.|++|+|++|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+..+ +..+++
T Consensus 217 ~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~ 291 (418)
T 3r4e_A 217 YGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWD-----AKDLIQ 291 (418)
T ss_dssp HCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEECTTCCSGGG-----THHHHH
T ss_pred cCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEcCCcCCHHH-----HHHHHH
Confidence 9999999999999999999999999999999999999998 788999999999999999999999875 455554
Q ss_pred C-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCc
Q 041113 776 P-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGL 853 (983)
Q Consensus 776 ~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~ 853 (983)
. .+|++++|++++||++++++++++|+++|+++++|+++ +|+|++++++||++++||+. . .+ +
T Consensus 292 ~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~--~---~e--~-------- 356 (418)
T 3r4e_A 292 NQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPTDLSPVTMGCALHFDTWVPNFG--I---QE--Y-------- 356 (418)
T ss_dssp TTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEE--E---EE--C--------
T ss_pred cCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCCCccHHHHHHHHHHHHhCCCcc--e---Ee--e--------
Confidence 4 47999999999999999999999999999999988887 79999999999999999642 1 11 1
Q ss_pred cchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 854 GTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 854 ~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
.....+..|++.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld--~~~l~~~~~~ 401 (418)
T 3r4e_A 357 MRHTEETDAVFPHDYWFEKGELFVGETPGHGVDID--EELAAKYPYK 401 (418)
T ss_dssp CCCCHHHHHHSCBSEEEETTEEEECCCSBSSBCCC--HHHHTTSCCC
T ss_pred cCcchhhHhhcCCCceeeCCEEECCCCCCCCCccC--HHHHHhccCC
Confidence 1112234566677888874 999999999999 8888888765
No 53
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=8.3e-57 Score=512.27 Aligned_cols=347 Identities=13% Similarity=0.147 Sum_probs=285.1
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
.|||++|+++.++ | + ..+.++|||+||+|++||||+.+.. .. ..+...++. +.|.|+|
T Consensus 5 ~mkIt~v~~~~~~-----~-----~-------~~~~~~V~v~td~G~~G~GE~~~~~-~~---~~~~~~i~~~l~p~liG 63 (401)
T 3sbf_A 5 ETIISDIHCIITK-----P-----D-------RHNLITVVVETNEGVTGFGCATFQQ-RP---LAVKTMVDEYLKPILIG 63 (401)
T ss_dssp CCBEEEEEEEEEC-----S-----S-------SSCEEEEEEEETTSCEEEEECCCTT-SH---HHHHHHHHHTHHHHHTT
T ss_pred CeEEEEEEEEEEc-----C-----C-------CceEEEEEEEeCCCCEEEEccccCC-CH---HHHHHHHHHHHHHHHcC
Confidence 4899999987652 1 0 0367899999999999999987643 22 234455655 9999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+. ............+|++|||+|||||+||.+|+|||+||||.. +++|++|+++
T Consensus 64 ~d~~~~e~~~~~~~-----~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~~ 129 (401)
T 3sbf_A 64 KNANNIEDLWQMMM-----VNAYWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFGGKS---------RDAIPVYTHA 129 (401)
T ss_dssp SBTTCHHHHHHHHH-----HTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCS---------SSSEEEEEEE
T ss_pred CChhhHHHHHHHHH-----HhcccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhCCCc---------CCeeeEEEeC
Confidence 99988766654322 111111223467899999999999999999999999999986 5789999876
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC----------------------hHHHHHHHHHHHHHcCCCcEEEEEc
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARRAD----------------------PIKDAEVIQEVRKKVGHRIELRVDA 708 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~----------------------~~~d~~~v~~vr~~~g~~~~l~vDa 708 (983)
. ..+++++++++++++++||++||+|+|.... ++.|+++|++||+++|+++.|++|+
T Consensus 130 ~-~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDa 208 (401)
T 3sbf_A 130 T-SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDV 208 (401)
T ss_dssp E-ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEEC
T ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 3 4789999999999999999999999986310 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcC
Q 041113 709 NRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKP 785 (983)
Q Consensus 709 N~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~ 785 (983)
|++||.++|+++++.|+++++.|||||++ +++++++|++++++||++||++++..+ +..+++. .+|++++|+
T Consensus 209 n~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~~d~v~~k~ 283 (401)
T 3sbf_A 209 HERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQSSVSLGLGELFNNPEE-----WKSLIANRRIDFIRCHV 283 (401)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTTCCCCEEECTTCCSHHH-----HHHHHHTTCCSEECCCG
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhhCCCCEEeCCccCCHHH-----HHHHHhcCCCCEEecCc
Confidence 99999999999999999999999999998 789999999999999999999998753 6666654 479999999
Q ss_pred CCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCC
Q 041113 786 SVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVT 864 (983)
Q Consensus 786 ~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~ 864 (983)
+++||++++++++++|+++|+++++|++. +|+|++++++||++++||+. . .+ + .....+.+|++
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~~~~h~~~~~s~i~~aA~~hlaaa~p~~~--~---~e--~--------~~~~~~~~~~~ 348 (401)
T 3sbf_A 284 SQIGGITPALKLGHLCQNFGVRIAWHCAPDMTPIGAAVNTHLNVHLHNAA--I---QE--H--------VEYNGNTHKVF 348 (401)
T ss_dssp GGGTSHHHHHHHHHHHHHHTCEECCCCCTTSCHHHHHHHHHHHHHSTTBC--C---EE--C--------CCCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecCCcccchHHHHHHHHHHHhCCCcc--e---ee--c--------cCCchhhHhhc
Confidence 99999999999999999999998888775 79999999999999999642 1 11 1 11112345666
Q ss_pred CCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 865 TDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 865 ~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 349 ~~~~~~~~G~i~~p~~PGlGve~d--~~~l~~~~~~ 382 (401)
T 3sbf_A 349 PNAAEPINGYLYASEIAGIGVEID--REAAAEFPVM 382 (401)
T ss_dssp TTCCCCBTTEECCCCSSBSSCCCC--HHHHHTSCCC
T ss_pred CCCCeeeCCEEECCCCCCCCceEC--HHHHHhcccc
Confidence 77777774 999999999999 8888898865
No 54
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=5.9e-57 Score=515.59 Aligned_cols=346 Identities=15% Similarity=0.141 Sum_probs=285.2
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g 570 (983)
+|||++|+++.+. | .++.++|||+||+|++||||+.+.. .. ..+...++. +.|.|+|
T Consensus 23 ~mkIt~v~~~~~~-----~-------------~~~~v~V~v~td~G~~G~GE~~~~~-~~---~~~~~~i~~~l~p~LiG 80 (425)
T 3vcn_A 23 MLKIIDAKVIVTC-----P-------------GRNFVTLKITTEDGITGVGDATLNG-RE---LSVVSFLQDHMVPSLIG 80 (425)
T ss_dssp CCBEEEEEEEEEC-----S-------------SSCEEEEEEEETTSCEEEEECCCTT-CH---HHHHHHHHHTTHHHHTT
T ss_pred CCEEEEEEEEEEc-----C-------------CCcEEEEEEEECCCCEEEEeccCCC-Ch---HHHHHHHHHHHHHHhCC
Confidence 4899999987652 1 1467899999999999999987543 11 234455654 8999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..++ ............+|++|||||||||+||.+|+|||+||||.. +++|++|+++
T Consensus 81 ~dp~~ie~i~~~~~-----~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~~ 146 (425)
T 3vcn_A 81 RDAHQIEDIWQFFY-----RGSYWRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLGGAC---------RTGVTVYGHA 146 (425)
T ss_dssp CBTTCHHHHHHHHH-----HHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCS---------SSSEEEEEEE
T ss_pred CChhhHHHHHHHHH-----hhcccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCCCC---------CCeeeEEEeC
Confidence 99998776664322 111111223467899999999999999999999999999986 5789999876
Q ss_pred cCCCCHHHHHHHHHHhhhcCCCEEEEeccCC----------------C------C---------hHHHHHHHHHHHHHcC
Q 041113 651 DSNKSPVEVASIATTLVEEGFTAIKLKVARR----------------A------D---------PIKDAEVIQEVRKKVG 699 (983)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~----------------~------~---------~~~d~~~v~~vr~~~g 699 (983)
. ..+++++++++++++++||++||+|+|.+ . . ++.|+++|++||+++|
T Consensus 147 ~-~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G 225 (425)
T 3vcn_A 147 N-GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLG 225 (425)
T ss_dssp E-ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHC
T ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcC
Confidence 3 46899999999999999999999999841 0 0 4578999999999999
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-
Q 041113 700 HRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP- 776 (983)
Q Consensus 700 ~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~- 776 (983)
+++.|++|+|++||+++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+..+ +..+++.
T Consensus 226 ~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~ 300 (425)
T 3vcn_A 226 WDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWD-----AKQLIEEQ 300 (425)
T ss_dssp SSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGG-----THHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHH-----HHHHHHcC
Confidence 99999999999999999999999999999999999998 788999999999999999999999875 4555544
Q ss_pred CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc
Q 041113 777 GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT 855 (983)
Q Consensus 777 ~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~ 855 (983)
.+|++++|++++|||+++++++++|+++|+++++|++. +|+|++++++||++++||+. . .+ +..
T Consensus 301 a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~--~---~e----------~~~ 365 (425)
T 3vcn_A 301 LIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGATDLSPVTMAAALHFDMSITNFG--L---QE----------YMR 365 (425)
T ss_dssp CCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCTTSCHHHHHHHHHHHHTCSCBC--C---EE----------CCC
T ss_pred CCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCCcccHHHHHHHHHHHHhCCCCc--e---Ee----------ecC
Confidence 47999999999999999999999999999999988887 79999999999999999641 1 11 111
Q ss_pred hhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 856 YQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 856 ~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
...+..|++.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld--~~~l~~~~~~ 408 (425)
T 3vcn_A 366 HTPETDAVFPHAYTFSDGMLHPGDKPGLGVDID--EDLAAKHPYK 408 (425)
T ss_dssp CCHHHHHHSCBCCEEETTEEECCSSSBTSBCCC--HHHHTTSCCC
T ss_pred cchhhhhhcCCCceeeCCEEECCCCCCCCCcCC--HHHHHhCcCC
Confidence 12234566677888874 999999999999 8888888765
No 55
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=3.8e-57 Score=513.80 Aligned_cols=355 Identities=14% Similarity=0.149 Sum_probs=283.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH--------
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-------- 563 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-------- 563 (983)
.|||++|+++.+++|+ .. +.++.++|||+||+|++||||+.+.+ +. +...+..
T Consensus 4 ~mkI~~i~~~~v~~p~------~~-------~~~~~~~V~v~td~G~~G~GE~~~~~---~~---~~~~~~~~~~~~~~~ 64 (394)
T 3mqt_A 4 GANIVSVEFIPVNVAA------TN-------WSENTVIVKVTDENGVYGLGEADGPP---EC---MKAFSEIENEHKWLN 64 (394)
T ss_dssp -CCEEEEEEEEEECC------------------CEEEEEEEEETTSCEEEEEECSCH---HH---HHHHHTCCCCBTTBC
T ss_pred CCeEeEEEEEEEecCC------CC-------CCccEEEEEEEECCCCEEEEEECCcH---HH---HHHHHhcccchhhHH
Confidence 3899999999999887 11 23789999999999999999997542 11 1222233
Q ss_pred -HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccc
Q 041113 564 -LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRST 642 (983)
Q Consensus 564 -~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~ 642 (983)
+.|.|+|+++.+++.++..++... ......+...+|++|||+|||||+||.+|+|||+||||.. ++
T Consensus 65 ~l~p~liG~dp~~~e~~~~~l~~~~----~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~---------r~ 131 (394)
T 3mqt_A 65 NIKEAVIGRDPLEFRANYNRMYDTT----KWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMGGAQ---------KA 131 (394)
T ss_dssp CGGGGTTTSCTTCHHHHHHHHHHHT----TTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCC---------SS
T ss_pred HHHHHhCCCChhHHHHHHHHHHHhh----hhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCCCC---------CC
Confidence 789999999988776664322110 1111234568899999999999999999999999999986 57
Q ss_pred eeEEEEeecC----CCCHH----HHHHHHHHhhhcCCCEEEE-eccCC-CChHHHHHHHHHHHHHcCCCcEEEEEcCCCC
Q 041113 643 SIKICALIDS----NKSPV----EVASIATTLVEEGFTAIKL-KVARR-ADPIKDAEVIQEVRKKVGHRIELRVDANRNW 712 (983)
Q Consensus 643 ~i~~~~~~~~----~~~~~----~~~~~~~~~~~~G~~~~Ki-Kig~~-~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~ 712 (983)
+|++|+++.. ..+++ ++.+++++++++||++||+ |+|.. .++++|+++|++||+++|+++.|++|+|++|
T Consensus 132 ~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~ 211 (394)
T 3mqt_A 132 QLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLYRW 211 (394)
T ss_dssp SBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTCC
T ss_pred eEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 8999988741 22445 6677899999999999999 99931 2689999999999999999999999999999
Q ss_pred -CHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCc
Q 041113 713 -TYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVI 788 (983)
Q Consensus 713 -~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~ 788 (983)
+.++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++++|++++
T Consensus 212 ~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~l~~~~~d~v~~k~~~~ 286 (394)
T 3mqt_A 212 TDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAINTRLCGAEMSTTRFE-----AQEWLEKTGISVVQSDYNRC 286 (394)
T ss_dssp SCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHSSSEEEECTTCCHHHH-----HHHHHHHHCCSEECCCTTTS
T ss_pred CCHHHHHHHHHHHhhcCCeEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHH-----HHHHHHcCCCCeEecCcccc
Confidence 9999999999999999999999998 788999999999999999999998753 5556554 579999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCc
Q 041113 789 GGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPI 868 (983)
Q Consensus 789 GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~ 868 (983)
||++++++++++|+++|++++.|+ ++++|++++++||++++||+. . .++.. +. + ...++.+|++.+++
T Consensus 287 GGit~~~~ia~~A~~~gi~~~~h~-~~s~i~~aa~~hlaaa~p~~~--~---~e~~~-~~----~-~~~~~~~~~~~~~~ 354 (394)
T 3mqt_A 287 GGVTELLRIMDICEHHNAQLMPHN-WKTGITAAAARHFGIVCHISE--Y---VEYLH-PD----F-WNGTLTQQLTLNEP 354 (394)
T ss_dssp SCHHHHHHHHHHHHHHTCEECCCC-CSCHHHHHHHHHHHHHCTTCS--C---CEECC-TT----T-CCCHHHHHTBSSCC
T ss_pred CCHHHHHHHHHHHHHcCCEEeccC-CCchHHHHHHHHHHHhCCCCc--e---EEecC-cc----c-ccchhHHhhccCCC
Confidence 999999999999999999988655 699999999999999999642 1 11110 00 0 01234567778888
Q ss_pred eeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 869 SICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 869 ~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
.+++ +|++||||+++| ++.++++....
T Consensus 355 ~~~~G~i~~p~~PGlGv~~d--~~~l~~~~~~~ 385 (394)
T 3mqt_A 355 KIIDGAIEVSDKPGLGIELN--IEFVEQVTGHK 385 (394)
T ss_dssp CCBTTBBCCCCCSBTCCCBC--HHHHHHHHCSC
T ss_pred cccCCEEECCCCCCCCCCcC--HHHHHhccccc
Confidence 8874 999999999999 88888887654
No 56
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=1.1e-56 Score=514.44 Aligned_cols=349 Identities=16% Similarity=0.173 Sum_probs=285.2
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECC-CCEEEEeecCcCcCcccHHHHHHHHHH-HHhH
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLED-GSVGYGEVAPLEIHKENLLDAEEQLRF-LLHF 567 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~-G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~ 567 (983)
|++|||++|+++.++ | + ..+.++|||+||+ |++||||+.+.. .. ..+...++. +.|.
T Consensus 24 ~~~mkIt~v~~~~~~-----~-----~-------~~~~v~V~v~Td~~Gi~G~GE~~~~~-~~---~~~~~~i~~~l~p~ 82 (440)
T 3t6c_A 24 MSNLFITNVKTILTA-----P-----G-------GIDLVVVKIETNEPGLYGLGCATFTQ-RI---YAVQSAIDEYLAPF 82 (440)
T ss_dssp --CCCEEEEEEEEEC-----T-----T-------SSCEEEEEEEESSTTCEEEEECCCGG-GH---HHHHHHHHTTHHHH
T ss_pred CCCCEEEEEEEEEEC-----C-----C-------CceEEEEEEEEcCCCCEEEEeeccCC-CH---HHHHHHHHHHHHHH
Confidence 567999999987652 1 0 0367899999999 999999987643 22 234455655 8999
Q ss_pred hccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 568 MTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 568 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
|+|+++.+++.++..++ +...........+|++|||+|||||+||.+|+|||+||||.. +++|++|
T Consensus 83 LiG~dp~~ie~i~~~~~-----~~~~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y 148 (440)
T 3t6c_A 83 LIGKDPARIEDIWQSAA-----VSGYWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLGGKC---------RDGIALY 148 (440)
T ss_dssp HTTCCTTCHHHHHHHHH-----HTTSCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSSEEEE
T ss_pred HcCCChhhHHHHHHHHH-----HhcccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcCCCC---------CCeeEEE
Confidence 99999998776654322 111111223467899999999999999999999999999986 5789999
Q ss_pred EeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC---------------------------------------hHHHH
Q 041113 648 ALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRAD---------------------------------------PIKDA 688 (983)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~---------------------------------------~~~d~ 688 (983)
+++ ...+++++++++++++++||++||+|+|.... ++.|+
T Consensus 149 ~~~-~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 227 (440)
T 3t6c_A 149 VHT-DGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIP 227 (440)
T ss_dssp EEE-CCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHH
T ss_pred EEC-CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 887 45789999999999999999999999985210 46889
Q ss_pred HHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCCh
Q 041113 689 EVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDP 766 (983)
Q Consensus 689 ~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~ 766 (983)
++|++||+++|+++.|+||+|++|++++|+++++.|+++++.|||||++ +++++++|++++++||++||++++..+
T Consensus 228 ~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-- 305 (440)
T 3t6c_A 228 RLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAMGELFVNVNE-- 305 (440)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEECTTCCSHHH--
T ss_pred HHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEeCcccCCHHH--
Confidence 9999999999999999999999999999999999999999999999999 788899999999999999999999753
Q ss_pred HHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchhhhhhhhhhcccc
Q 041113 767 LNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLELQNAYLCKVMNRE 844 (983)
Q Consensus 767 ~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~~~~~~~~~~~~~ 844 (983)
+..+++. .+|++|+|++++|||+++++++++|+++|+++++|++. +|+|++++++||++++||+. . .+
T Consensus 306 ---~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~Ig~aa~~hlaaa~pn~~--~---~E-- 375 (440)
T 3t6c_A 306 ---WKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSPGDISPIGVCANMHLDLSSPNFG--I---QE-- 375 (440)
T ss_dssp ---HHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCSSSSCHHHHHHHHHHHHHCTTBC--C---EE--
T ss_pred ---HHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccCCCccHHHHHHHHHHHHhCCCCc--e---Ee--
Confidence 6666654 47999999999999999999999999999998888875 79999999999999999641 1 11
Q ss_pred CCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 845 LCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 845 ~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
+. ....+..|++.+++.+++ +|++|||||++| ++.++++.+.
T Consensus 376 ~~--------~~~~~~~~~~~~~~~~~~G~i~vp~~PGLGveld--~~~l~~~~~~ 421 (440)
T 3t6c_A 376 YT--------PMNDALREVFPGCPEVDQGYAYVNDKPGLGIDIN--EALAAKFPCE 421 (440)
T ss_dssp CC--------CCCHHHHHHSTTCCEEETTEEECCCCSBTSCCCC--HHHHTTSCCC
T ss_pred ec--------CcchhhHhhcCCCceecCCEEECCCCCCCCcccC--HHHHHhcccc
Confidence 10 111123466677888874 999999999999 8888898866
No 57
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=1.5e-56 Score=514.43 Aligned_cols=352 Identities=12% Similarity=0.111 Sum_probs=288.3
Q ss_pred CCccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHh
Q 041113 488 CSLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLH 566 (983)
Q Consensus 488 ~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~ 566 (983)
++|+.++|++|+.+.++ | ..++.++|||+||+|++||||+.+. +..+ .+...++ .++|
T Consensus 21 qsm~~~~It~v~~~~v~-----~------------~~~~~vlV~v~Td~G~~G~GEa~~~-~~~~---~~~~~i~~~lap 79 (421)
T 4hnl_A 21 QSMTPTIITDVKSFAIK-----P------------DRHNLVVVKVETNKGISGLGCSTFQ-FRPL---AVKTVVDEYLRP 79 (421)
T ss_dssp CCCCCCBEEEEEEEEEC-----S------------SSSCEEEEEEEETTSCCEEEECCCT-TSHH---HHHHHHHHTHHH
T ss_pred cccCCceEEEEEEEEEC-----C------------CCceEEEEEEEECCCCEEEEeccCC-CCHH---HHHHHHHHHHHH
Confidence 46777899999988763 1 1257899999999999999998753 2233 2334444 4889
Q ss_pred HhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 567 FMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 567 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
.|+|+++.+++.++..+. ........+...+|++|||+|||||+||.+|+|||+||||.. +++||+
T Consensus 80 ~LiG~dp~~ie~i~~~~~-----~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLGG~~---------r~~v~~ 145 (421)
T 4hnl_A 80 LLMGRDANEIEDIWQVMN-----VNSYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLGGKA---------RTAIPA 145 (421)
T ss_dssp HHTTCBTTCHHHHHHHHH-----HTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------SSCEEE
T ss_pred HHCCCChhhHHHHHHHHH-----hhccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcCCcc---------Ccccce
Confidence 999999998776654221 111112234567899999999999999999999999999987 678999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCC----------------------ChHHHHHHHHHHHHHcCCCcEE
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRA----------------------DPIKDAEVIQEVRKKVGHRIEL 704 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~----------------------~~~~d~~~v~~vr~~~g~~~~l 704 (983)
|++.. ..+++++.+++++++++||+++|+|+|... +++.|+++++++|+++|+++.|
T Consensus 146 y~~~~-~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l 224 (421)
T 4hnl_A 146 YTHAV-ADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQM 224 (421)
T ss_dssp EEEEE-ESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred ecccC-CCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceE
Confidence 98874 468999999999999999999999998521 2578999999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEE
Q 041113 705 RVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAI 781 (983)
Q Consensus 705 ~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i 781 (983)
++|+|++||+++|+++++.|+++++.|||||++ |++++++|++++++||++||++++..+ +..+++. .+|++
T Consensus 225 ~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~v 299 (421)
T 4hnl_A 225 LHDVHERLHPNQAIQFAKAAEPYQLFFLEDILPPDQSHWLTQLRSQSATPIATGELFNNPME-----WQELVKNRQIDFM 299 (421)
T ss_dssp EEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHTTCCCCEEECTTCCSGGG-----THHHHHTTCCSEE
T ss_pred eccccccCCHHHHHHHHHHhhhhhhcccccCCcccchHHHHHHHhcCCCCeecCcceehhHH-----HHHHHhcCCceEE
Confidence 999999999999999999999999999999998 788999999999999999999999875 5555554 47999
Q ss_pred EEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCc-hHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccc
Q 041113 782 VIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFE-SGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLK 860 (983)
Q Consensus 782 ~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~e-s~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 860 (983)
|+|++++||||++++++++|+++|++++.|++.+ ++|++++++|++++++|+. . .+. +.. .++.
T Consensus 300 ~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~~s~i~~aa~~hl~aa~~n~~--~---~e~---------~~~-~~~~ 364 (421)
T 4hnl_A 300 RAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSDISPVGLAVNTHLNIHLHNAA--I---QET---------IEL-PANT 364 (421)
T ss_dssp CCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHHHCTTBC--C---EEC---------CCC-CHHH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcchhHHHHHHHHHHHHhCCCCc--c---ccc---------cCc-chhh
Confidence 9999999999999999999999999988888776 7899999999999999742 1 110 111 2233
Q ss_pred ccCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 861 EDVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 861 ~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
++++.+++.+++ +|++|||||++| ++.++++.+..
T Consensus 365 ~~~~~~~~~~~~G~i~~p~~PGLGveld--~~~l~~y~~~~ 403 (421)
T 4hnl_A 365 QSVFVGSPQPKGGFFYPMEKSGIGITFD--EEAAADFPVVY 403 (421)
T ss_dssp HHHEECCCCCBTTEECCCCSSBSCCEEC--HHHHTTCBCCC
T ss_pred hhhccCCCeEECCEEECCCCCCCCeeEC--HHHHhhccccc
Confidence 455566677773 999999999999 89999998654
No 58
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=3.7e-56 Score=505.35 Aligned_cols=355 Identities=17% Similarity=0.158 Sum_probs=301.7
Q ss_pred eeEeEEEEEEEEeeCCCCCcccccc--ccCcceeeeEEEEEEEECCCCEEEEeecCc-C-cCcccHHHHHHHHHHHHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYID--HNRSRFCREGFILSLYLEDGSVGYGEVAPL-E-IHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~--~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~-~-~~~~~~~~~~~~l~~~~~~l 568 (983)
|||++|+++.+++|++.||.++.+. . ..++.++|+|+|++|++||||+.+. + ++.++...+...++.++|.|
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~~~l 78 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKF----DRLDSTYLRIDTDEGVTGWGEGCPWGHSYLPAHGPGLRAGIATLAPHL 78 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEE----EEEEEEEEEEEETTSCEEEEEECCSTTTSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccc----cccceEEEEEEECCCCEEEEEEecCCCCcCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999888764 3 3488999999999999999999876 4 44667767777788899999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.++..++..+ ...+ .+ .++|++|||+||||++||..|+|||+||||.. +++||+|+
T Consensus 79 ~g~d~~~~~~~~~~l-----~~~~----~g-~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~v~~~~ 139 (378)
T 2qdd_A 79 LGLDPRSLDHVNRVM-----DLQL----PG-HSYVKSPIDMACWDILGQVAGLPLWQLLGGEA---------ATPVPINS 139 (378)
T ss_dssp TTCCTTCHHHHHHHH-----HHHS----CS-CHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSS---------CCCEEBEE
T ss_pred CCCCccCHHHHHHHH-----HHhh----cc-chHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC---------CCCCceEE
Confidence 999988765554321 1111 11 57899999999999999999999999999975 46799998
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
++. ..+++++.+.+++++++||++||+|+|.+ +++.|+++|++||+++|+++.|++|+|++||.++|+++++.|+ ++
T Consensus 140 ~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~-~~ 216 (378)
T 2qdd_A 140 SIS-TGTPDQMLGLIAEAAAQGYRTHSAKIGGS-DPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVR-AR 216 (378)
T ss_dssp EEC-SCCHHHHHHHHHHHHHHTCCEEEEECCSS-CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCC-CC
T ss_pred Eec-CCCHHHHHHHHHHHHHHhhhheeecCCCC-ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhC-CC
Confidence 873 46899999999999999999999999963 6899999999999999999999999999999999999999999 99
Q ss_pred CceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 729 LQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 729 i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
+ |||||+++++.+++|++++++||++||++.+.. .+..+++ ..+|++++|++++||++++++++++|+++|++
T Consensus 217 i-~iEqP~~d~~~~~~l~~~~~iPI~~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~ 290 (378)
T 2qdd_A 217 D-WIEQPCQTLDQCAHVARRVANPIMLDECLHEFS-----DHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQ 290 (378)
T ss_dssp C-EEECCSSSHHHHHHHHTTCCSCEEECTTCCSHH-----HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCE
T ss_pred c-EEEcCCCCHHHHHHHHHhCCCCEEECCCcCCHH-----HHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCe
Confidence 9 999999989999999999999999999999865 3555554 45799999999999999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCC-Cceeec----cCCCCeeeEE
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTD-PISICH----NSCRGFVEAS 882 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~-p~~~~~----~P~~pGlGv~ 882 (983)
+++|+++||+|++++++|++++++|.. + ...+++ ..++..|++.+ |+.+++ +|++||||++
T Consensus 291 ~~~~~~~es~i~~aa~~hlaaa~~~~~--~----------~~~~d~--~~~~~~d~~~~~~~~~~~G~~~~p~~PGlGv~ 356 (378)
T 2qdd_A 291 MHIEDVGGTALADTAALHLAASTPEAN--R----------LASWLG--HAHLADDPIPGQGARNRDGLATPPSAPGLGVI 356 (378)
T ss_dssp EEECCSSCCHHHHHHHHHHHHTSCTTT--B----------CCBCCG--GGGBSCCSSTTCSCCCBTTEECCCCSSBTCCC
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCcc--e----------eccccc--cchhhhccccCCCceEECCEEECCCCCcCCCc
Confidence 999999999999999999999998631 1 111223 23667888888 888874 8999999999
Q ss_pred ecchhhhhhhccc
Q 041113 883 VAKATHILQNLQI 895 (983)
Q Consensus 883 ~d~a~~~~~~~~~ 895 (983)
+| ++.++++..
T Consensus 357 ~d--~~~l~~~~~ 367 (378)
T 2qdd_A 357 PD--PEALGRPVA 367 (378)
T ss_dssp CC--GGGSCSCSE
T ss_pred cC--HHHHhccee
Confidence 99 777666554
No 59
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=1.9e-56 Score=507.48 Aligned_cols=355 Identities=17% Similarity=0.200 Sum_probs=297.3
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l 568 (983)
|++|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+ .++ .+...++. ++|.|
T Consensus 1 ~~~mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~g----~~~--~~~~~i~~~l~~~l 70 (382)
T 2gdq_A 1 MALVKIVRIETFPLFHRLEKPYGDANGFK----RYRTCYLIRIITESGIDGWGECVD----WLP--ALHVGFTKRIIPFL 70 (382)
T ss_dssp --CCBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECS----CHH--HHHHHHHHTHHHHH
T ss_pred CCCCEEEEEEEEEEecccCccccccccee----ccCcEEEEEEEECCCCEEEEeecC----chH--HHHHHHHHHHHHHh
Confidence 55689999999999999999999988754 348899999999999999999973 121 24555665 89999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.++..++.. +.. ..++|++|||+||||++||.+|+|||+||||.. +++||+|+
T Consensus 71 ~G~d~~~~~~~~~~-----l~~--------~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~vp~~~ 128 (382)
T 2gdq_A 71 LGKQAGSRLSLVRT-----IQK--------WHQRAASAVSMALTEIAAKAADCSVCELWGGRY---------REEIPVYA 128 (382)
T ss_dssp TTSBTTCHHHHHHH-----HHH--------HCHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCS---------CSEEEEEE
T ss_pred cCCCcccHHHHHHH-----HHH--------HHhHHHHHHHHHHHHHHHHHcCCcHHHHcCCCC---------CCceeEEE
Confidence 99998775544321 111 126899999999999999999999999999975 46899998
Q ss_pred eec-CCCCH---HHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc
Q 041113 649 LID-SNKSP---VEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI 724 (983)
Q Consensus 649 ~~~-~~~~~---~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l 724 (983)
+++ ...++ +++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++|+.++|+++++.|
T Consensus 129 ~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l 207 (382)
T 2gdq_A 129 SFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG-TSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYF 207 (382)
T ss_dssp ECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS-SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHH
T ss_pred EecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC-CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 752 23578 999999999999999999999996 3789999999999999999999999999999999999999999
Q ss_pred ccC-CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHH
Q 041113 725 KDC-DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARW 800 (983)
Q Consensus 725 ~~~-~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~ 800 (983)
+++ ++.|||||++ +++++++|++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++
T Consensus 208 ~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 282 (382)
T 2gdq_A 208 SEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPA-----QYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQL 282 (382)
T ss_dssp TTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHH-----HHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred hhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHH-----HHHHHHHcCCCCEEecCccccCCHHHHHHHHHH
Confidence 999 9999999998 78999999999999999999999865 36666654 479999999999999999999999
Q ss_pred HHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCce------eec--
Q 041113 801 AQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPIS------ICH-- 872 (983)
Q Consensus 801 A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~------~~~-- 872 (983)
|+++|+++++| ++|+++++++++|++++++|. .+ ++++.+..+.+|++.+|+. +++
T Consensus 283 A~~~g~~~~~~-~~es~i~~~a~l~laa~~~~~-------~e--------~~~d~~~~~~~d~~~~~~~~~~~~~~~~G~ 346 (382)
T 2gdq_A 283 ARYFGVRASAH-AYDGSLSRLYALFAQACLPPW-------SK--------MKNDHIEPIEWDVMENPFTDLVSLQPSKGM 346 (382)
T ss_dssp HHHHTCEECCC-CSSCSHHHHHHHHHHHTSCCS-------SS--------CTTSCSCCEEEECSSCGGGGGBCCCCBTTE
T ss_pred HHHcCCEEeec-CCCcHHHHHHHHHHHHhCchH-------hh--------ccccccccHHHHHhcccccccccccccCCE
Confidence 99999998877 999999999999999998852 00 1112211146788878887 773
Q ss_pred --cCCCCeeeEEecchhhhhhhcccccccc
Q 041113 873 --NSCRGFVEASVAKATHILQNLQINNDVI 900 (983)
Q Consensus 873 --~P~~pGlGv~~d~a~~~~~~~~~~~~~i 900 (983)
+|++||||+++| ++.++++......+
T Consensus 347 ~~~p~~PGlGv~~d--~~~l~~~~~~~~~~ 374 (382)
T 2gdq_A 347 VHIPKGKGIGTEIN--MEIVNRYKWDGSAY 374 (382)
T ss_dssp EECCCSSBTSSCBC--HHHHHHTBCCSCCC
T ss_pred EECCCCCCCCceeC--HHHHHhhhccCccc
Confidence 899999999999 88888887665443
No 60
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=1e-55 Score=504.07 Aligned_cols=347 Identities=14% Similarity=0.096 Sum_probs=284.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.+..+ .++.++|||+||+|++||||+.+. +..+++ ...++.+.|.|+|++
T Consensus 3 MkI~~i~~~~~~~~-----------------~~~~~~V~v~td~G~~G~GE~~~~-~~~~~~---~~~i~~l~p~liG~d 61 (409)
T 3go2_A 3 LKVVSVDTLCCDAG-----------------WRNYHFVKLTTDEGIVGWSEFDEG-FGSPGV---TAVIEQLGKRLVGAS 61 (409)
T ss_dssp CBEEEEEEEEEECS-----------------SSEEEEEEEEETTCCEEEEEECST-TTCTTH---HHHHHHHHHHHTTSB
T ss_pred CEEEEEEEEEECCC-----------------CccEEEEEEEECCCCEEEEeecCC-CCcHHH---HHHHHHHHHHhcCCC
Confidence 89999998877521 157899999999999999998763 333433 345567999999999
Q ss_pred ccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec-
Q 041113 573 ISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID- 651 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~- 651 (983)
+.+++.++..++. .......+...+|++|||+|||||+||.+|+|||+||||.. +++|++|++..
T Consensus 62 ~~~~e~~~~~~~~-----~~~~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~s~~~ 127 (409)
T 3go2_A 62 VMEHERFFAEAYC-----LTRPATGGVVSEGIGAIENALLDAKAKTLNVPCYELLGGKL---------RDRVPVYWSHCP 127 (409)
T ss_dssp TTCHHHHHHHHHH-----HHGGGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCS---------CSEEEEEECSTT
T ss_pred hhhHHHHHHHHHH-----HhccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCCCC---------CCeEEEEEeecC
Confidence 9987766643321 11111234567899999999999999999999999999976 58899997631
Q ss_pred ------------CCCCHHHHHHHHHHhhhcCCCEEEEec-------------cCC----C-------ChHHHHHHHHHHH
Q 041113 652 ------------SNKSPVEVASIATTLVEEGFTAIKLKV-------------ARR----A-------DPIKDAEVIQEVR 695 (983)
Q Consensus 652 ------------~~~~~~~~~~~~~~~~~~G~~~~KiKi-------------g~~----~-------~~~~d~~~v~~vr 695 (983)
...+++++++.+++++++||++||+|+ |.. . ..+.|+++|++||
T Consensus 128 ~~~i~~~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR 207 (409)
T 3go2_A 128 TWRINHPKFFGPPVTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALR 207 (409)
T ss_dssp HHHHHCTTTSSSCCCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHH
Confidence 245899999999999999999999999 531 0 1356899999999
Q ss_pred HHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC
Q 041113 696 KKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH 775 (983)
Q Consensus 696 ~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~ 775 (983)
+++|+++.|++|+|++||.++|+++++.|+++++.|||||+.+++++++|++++++||++||++.+.. .+..+++
T Consensus 208 ~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~ 282 (409)
T 3go2_A 208 DGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEIDSYSPQGLAYVRNHSPHPISSCETLFGIR-----EFKPFFD 282 (409)
T ss_dssp HHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECCCSCHHHHHHHHHTCSSCEEECTTCCHHH-----HHHHHHH
T ss_pred HHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeCcCCHHHHHHHHhhCCCCEEeCCCcCCHH-----HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999875 3666665
Q ss_pred C-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCcc
Q 041113 776 P-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLG 854 (983)
Q Consensus 776 ~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~ 854 (983)
. .+|++|+|+++ ||++++++++++|+++|++++. |+++++|++++++||++++||+. +.+++ ++
T Consensus 283 ~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h~~~s~i~~aa~~hlaaa~p~~~-----~~E~~--------~~ 347 (409)
T 3go2_A 283 ANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP-HNFYGHLCTMINANFAAAVPNLR-----IMETD--------ID 347 (409)
T ss_dssp TTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE-CCCSCHHHHHHHHHHHHHCSSBC-----CEEEC--------CC
T ss_pred hCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee-cCCCcHHHHHHHHHHHHcCCCCe-----EEEee--------CC
Confidence 4 47999999999 9999999999999999999886 67999999999999999999641 11111 12
Q ss_pred chhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 855 TYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 855 ~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
. ..+.+|++.+|+.+++ +|++|||||++| ++.++++....
T Consensus 348 ~-~~~~~d~~~~~~~~~~G~i~~p~~PGlGveld--~~~l~~~~~~~ 391 (409)
T 3go2_A 348 R-LAWEDELFTHAPEYQNGELIIPDRPGWGTDPV--EEAILAHPPKV 391 (409)
T ss_dssp C-CTTHHHHBSCCCCEETTEEECCCSSBSSCCBC--HHHHHHSCC--
T ss_pred c-chhhhhhccCCCeeECCEEECCCCCCCCcccC--HHHHHhCcCCC
Confidence 2 2345677778888874 999999999999 88888887554
No 61
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=4e-56 Score=504.93 Aligned_cols=349 Identities=15% Similarity=0.148 Sum_probs=279.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.+ | .+.++|||+||+|++||||+.+.. . ...+...++.+.|.|+|++
T Consensus 2 MkIt~i~~~~~--~------------------~~~~~V~v~td~G~~G~GE~~~~g-~---~~~~~~~i~~l~p~liG~d 57 (405)
T 3rr1_A 2 VKITRLTTYRL--P------------------PRWMFLKVETDEGVTGWGEPVIEG-R---ARTVEAAVHELSDYLIGQD 57 (405)
T ss_dssp CCEEEEEEEEE--T------------------TTEEEEEEEETTSCEEEECCCCTT-C---HHHHHHHHHHHGGGTTTSC
T ss_pred CeEEEEEEEEE--C------------------CCEEEEEEEECCCCEEEEeCCCCC-C---HHHHHHHHHHHHHHHCCCC
Confidence 89999998876 1 123799999999999999998653 1 2334456677999999999
Q ss_pred ccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC
Q 041113 573 ISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS 652 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~ 652 (983)
+.+++.++..+. ........+...+|++|||+|||||+||.+|+|||+||||.. +++||+|+++ +
T Consensus 58 p~~~e~~~~~l~-----~~~~~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~~-~ 122 (405)
T 3rr1_A 58 PSRINDLWQTMY-----RAGFYRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLGGLV---------RDKMRTYSWV-G 122 (405)
T ss_dssp TTCHHHHHHHHH-----HTSSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSCEEEEEEC-C
T ss_pred cccHHHHHHHHH-----HhhcccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCccc---------cCceeeeEeC-C
Confidence 988766654322 111112223467899999999999999999999999999986 5789999987 4
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCC--------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhc
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRA--------DPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLI 724 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~--------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l 724 (983)
..+++++++++++++++||++||+ +|.+. ++++|+++|++||+++|+++.|++|+|++||+++|+++++.|
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L 201 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKEL 201 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 678999999999999999999999 77521 267899999999999999999999999999999999999999
Q ss_pred ccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 725 KDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 725 ~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++ ..+|++++|++++|||+++++++++|
T Consensus 202 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~-----~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA 276 (405)
T 3rr1_A 202 EPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMFSRFD-----FKRVLEAGGVSILQPDLSHAGGITECVKIAAMA 276 (405)
T ss_dssp GGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCCSHHH-----HHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHH
T ss_pred HhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcCCHHH-----HHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHH
Confidence 9999999999998 789999999999999999999998753 556665 45799999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRG 877 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~p 877 (983)
+++|+++++|+ ++++|++++++|++++++|+ .+ .++.+ +..+.. ...++......+|+.+++ +|++|
T Consensus 277 ~~~gi~v~~h~-~~s~i~~aa~~hlaaa~pn~--~~---~e~~~--~~~~~~-~~~~~~~~~~~~~~~~~~G~i~vp~~P 347 (405)
T 3rr1_A 277 EAYDVALAPHC-PLGPIALAACLHVDFVSWNA--TL---QEQSM--GIHYNK-GAELLDYVRNKADFALEGGYIRPPRLP 347 (405)
T ss_dssp HTTTCEECCBC-CSCHHHHHHHHHHHHHCTTB--CC---EEECC-----------CGGGGBSCGGGGCEETTEECCCCSS
T ss_pred HHcCCEEEeCC-CCcHHHHHHHHHHHHhCCCc--ee---eeecc--cccccc-chhhhhhcccCCCceeeCCEEECCCCC
Confidence 99999987665 68999999999999999964 11 11110 000000 011222111123677763 99999
Q ss_pred eeeEEecchhhhhhhccccc
Q 041113 878 FVEASVAKATHILQNLQINN 897 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~~~ 897 (983)
||||++| ++.++++....
T Consensus 348 GLGveld--~~~l~~~~~~~ 365 (405)
T 3rr1_A 348 GLGVDID--EALVIERSKEA 365 (405)
T ss_dssp BTSCCBC--HHHHHHHHHSC
T ss_pred cCCcccC--HHHHHhhhccc
Confidence 9999999 88888887653
No 62
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=100.00 E-value=2.4e-55 Score=526.75 Aligned_cols=416 Identities=28% Similarity=0.445 Sum_probs=299.4
Q ss_pred HHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHHHH
Q 041113 3 LTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVLEL 82 (983)
Q Consensus 3 ~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 82 (983)
.+++++||+.|.++|||||||+||+|+++.+..... .+.. ..+......... +.+.++++.+++++++
T Consensus 153 ~~~l~~A~~~A~~gr~GPV~l~iP~d~~~~~~~~~~---------~~~~-~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 220 (578)
T 3lq1_A 153 KWHGSRAVDIAMKTPRGPVHLNFPLREPLVPILEPS---------PFTA-TGKKHHHVHIYY--THEVLDDSSIQKMVTE 220 (578)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEEECCSCCCCCCSSC---------CC-------------CC--EEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcEEEECccCCCCCCCcccc---------hhcc-cCcccccccccc--CccCCChHHHHHHHHH
Confidence 458999999999999999999999998765421100 0000 000000000000 1224567789999999
Q ss_pred HhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCCCC
Q 041113 83 VQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQFD 162 (983)
Q Consensus 83 L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~aD 162 (983)
|++ |||+|++|+|+..++.+++++|||++|+||++|++++ |+.+|++||++ +|.++..+...+...+.+||
T Consensus 221 L~~-~rPvIl~G~g~~~~~~~~l~~lae~~~~PV~~t~~~~------~~~~~~~hp~~--~g~~~~~~~~~~~~~~~~aD 291 (578)
T 3lq1_A 221 CTG-KKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSG------LRSYGALDEVV--IDQYDAFLKEAEIIDKLTPE 291 (578)
T ss_dssp TTT-SCEEEEECSCCCTTCHHHHHHHHHHHTCCEEECGGGS------TTSBSSCCSSE--ECCHHHHTTSHHHHHHTCCS
T ss_pred hcc-CCeEEEECCCCChHHHHHHHHHHHhcCcEEEEecCCC------CCCCCCCCccc--cccHHHHhcCccccccCCCC
Confidence 999 9999999999875556899999999999999998766 68999999995 78888776666656678999
Q ss_pred EEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCC-ChhHHHHHHHHHHH
Q 041113 163 VIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHR-SSKWCSFLRALDMM 241 (983)
Q Consensus 163 lvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~-~~~w~~~~~~~~~~ 241 (983)
+||.+|+++.+..+..|....++.++||||+|+.++++++.+++.|++|++.++++|.+.+.... ...|.+.+.+.+..
T Consensus 292 lvl~~G~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~w~~~~~~~~~~ 371 (578)
T 3lq1_A 292 VVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMPDDAKDAAWLNGWTSYNKV 371 (578)
T ss_dssp EEEEESSCCSCHHHHHHHHHCCSSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHSCSTTCCHHHHHHHHHHHHH
T ss_pred EEEEeCCcccchhHHHHHhcCCCCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhhccCCCCcHHHHHHHHHHHHH
Confidence 99999999888887777765455689999999999999999999999999999999998775544 56788877665544
Q ss_pred HHH-HHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEeecC
Q 041113 242 VAS-EISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAGNR 320 (983)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 320 (983)
+.. .... .....++++.++++.|.+.+|++++|++++|+++++...+.... ..+ .++.+++
T Consensus 372 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~iv~~~~~~~~~~~~~~~~~~----~~~-------------~~~~~~~ 433 (578)
T 3lq1_A 372 AREIVLAE-MANTTILEEGKIVAELRRLLPDKAGLFIGNSMPIRDVDTYFSQI----DKK-------------IKMLANR 433 (578)
T ss_dssp HHHHHHHH-SCC----CTTHHHHHHHHHSCSEEEEEECSSHHHHHHHHHCCCC----SSE-------------EEEECCC
T ss_pred HhHHHHHh-hhcCCCCCHHHHHHHHHHhCCCCCeEEEeCccHHHHHHHhhccc----CCC-------------ceEEeCC
Confidence 332 2221 12345799999999999999999999999999776654332100 111 2235677
Q ss_pred CCCCccchHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCcccccc
Q 041113 321 GASGIDGLLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQ 400 (983)
Q Consensus 321 G~mG~~g~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~ 400 (983)
|+||++|++|+|||++++ +++|||++|||||+|++|||+|+++ |++|+++||+||++|+|++.+++... ...+++
T Consensus 434 G~~G~~g~l~~AiGaa~~-~~~vv~i~GDGsf~~~~~eL~ta~~--~~l~~~ivv~NN~~~g~~~~~~~~~~--~~~~~~ 508 (578)
T 3lq1_A 434 GANGIDGVVSSALGASVV-FQPMFLLIGDLSFYHDMNGLLMAKK--YKMNLTIVIVNNDGGGIFSFLPQANE--PKYFES 508 (578)
T ss_dssp SSCCSSSHHHHHHHHTTT-SSSEEEEEEHHHHHHTGGGGHHHHH--TTCCEEEEEECCC---------------------
T ss_pred CccccccHHHHHHHHhcC-CCCEEEEEchHHHHhhHHHHHhhcc--CCCCeEEEEEECCcCccccccccccc--cchhhh
Confidence 899998899999999865 7999999999999999999999999 99999999999999999987533211 123445
Q ss_pred ccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHHHHHH
Q 041113 401 YFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATFHSML 462 (983)
Q Consensus 401 ~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~~~~~ 462 (983)
.+.+.+++||.++|++||+++++|++.+||+++|+++++.++|+||||.++++++...++.+
T Consensus 509 ~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~liev~~~~~~~~~~~~~~ 570 (578)
T 3lq1_A 509 LFGTSTELDFRFAAAFYDADYHEAKSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQAL 570 (578)
T ss_dssp ------CCCTHHHHHHTTCEEEECCSHHHHHHHHHHHTTSSSEEEEEEC-------------
T ss_pred hccCCCCCCHHHHHHHcCCceEecCCHHHHHHHHHHHHhCCCCEEEEEECCccccHHHHHhh
Confidence 55666789999999999999999999999999999999999999999999998876666554
No 63
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=9.2e-57 Score=500.08 Aligned_cols=328 Identities=19% Similarity=0.216 Sum_probs=275.2
Q ss_pred EEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC-cccc
Q 041113 497 RMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA-KISY 575 (983)
Q Consensus 497 ~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~-~~~~ 575 (983)
+++++.+++||+.||.++.+++ ..++.++||| |++|++||||+.+.++++++...+.+.++.+. ++|+ ++.+
T Consensus 2 ~i~~~~~~lpl~~p~~~s~g~~----~~~~~~~V~v-td~G~~G~GE~~~~~~~ge~~~~~~~~l~~~~--l~g~~d~~~ 74 (338)
T 3ijl_A 2 KMTFFPYELKLRHVFTVATYSR----TTTPDVQVEI-EYEGVTGYGEASMPPYLGETVESVMNFLKKVN--LEQFSDPFQ 74 (338)
T ss_dssp CEEEEECCEEEEEEEEETTEEE----EEECEEEEEE-EETTEEEEEEEECCGGGSCCHHHHHHHHTTCC--CTTCCCTTC
T ss_pred eEEEEEEEEeccCcEEeeCcEE----EEeeEEEEEE-EeCCcEEEEeeeCCCCCCCCHHHHHHHHHHHH--hcCCCCccC
Confidence 4788899999999999998764 4589999999 79999999999987766677666555444332 7787 7776
Q ss_pred cccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecCCCC
Q 041113 576 FLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDSNKS 655 (983)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~~ 655 (983)
++.++.. +.... ...++|++|||||||||+||.+|+|||+||||.+ +++++|++..+..+
T Consensus 75 ~e~~~~~-----l~~~~-----~~~~~A~said~ALwDl~gk~~g~Pl~~LlGg~~----------~~v~~~~~~~~~~~ 134 (338)
T 3ijl_A 75 LEDILSY-----VDSLS-----PKDTAAKAAVDIALHDLVGKLLGAPWYKIWGLNK----------EKTPSTTFTIGIDT 134 (338)
T ss_dssp HHHHHHH-----HHHTC-----SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCG----------GGCCBBCCBCCCCC
T ss_pred HHHHHHH-----HHHhc-----cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CCcceEEEEEeCCC
Confidence 6555432 11111 2468999999999999999999999999999975 45665554334578
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCC-HHHHHHHHhhcccCCCceeec
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWT-YQEALEFGFLIKDCDLQYIEE 734 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~-~~~a~~~~~~l~~~~i~~iEe 734 (983)
++++.++++++++ ||++||+|+|. ++|+++|++||+++| ..||+|+|++|+ +++|+++++.|+++++.||||
T Consensus 135 ~e~~~~~a~~~~~-g~~~~K~Kvg~----~~d~~~v~avR~~~~--~~l~vDaN~~~t~~~~A~~~~~~l~~~~i~~iEe 207 (338)
T 3ijl_A 135 PDVVRAKTKECAG-LFNILKVKLGR----DNDKEMIETIRSVTD--LPIAVDANQGWKDRQYALDMIHWLKEKGIVMIEQ 207 (338)
T ss_dssp HHHHHHHHHHHHT-TCSSEEEECSS----SCHHHHHHHHHTTCC--CCEEEECTTCCCCHHHHHHHHHHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHHh-cccEEEEecCc----HHHHHHHHHHHhhcC--CcEEEECcCCCCCHHHHHHHHHHHhhCCCCEEEC
Confidence 9999999999877 89999999986 369999999999984 699999999995 999999999999999999999
Q ss_pred CCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCC
Q 041113 735 PVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSA 812 (983)
Q Consensus 735 P~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~ 812 (983)
|++ |++++++|++++++|||+||++++..+ +..+. ..+|++|+|++++||++++++++++|+++|+++++||
T Consensus 208 P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~-~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 281 (338)
T 3ijl_A 208 PMPKEQLDDIAWVTQQSPLPVFADESLQRLGD-----VAALK-GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMVGC 281 (338)
T ss_dssp CSCTTCHHHHHHHHHTCSSCEEESTTCCSGGG-----TGGGB-TTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCcHHHHHHHHhcCCCCEEECCCCCCHHH-----HHHHH-hhCCEEEecccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 998 789999999999999999999999875 55555 5689999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEe
Q 041113 813 AFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASV 883 (983)
Q Consensus 813 ~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~ 883 (983)
++|++|++++++|++++++++ .+++..++.+|++. ++.+++ +|++|||||++
T Consensus 282 ~~es~i~~aa~~~la~~~~~~------------------~l~~~~~~~~d~~~-~~~~~~G~i~~p~~PGlGv~l 337 (338)
T 3ijl_A 282 MTETSCAISAASQFSPAVDFA------------------DLDGNLLISNDRFK-GVEVVNGKITLNDLPGIGVMK 337 (338)
T ss_dssp CSCCHHHHHHHHTTGGGCSEE------------------CCCGGGGBSCCCCB-CCEEETTEEECCSCSBTCCBC
T ss_pred CcccHHHHHHHHHHhccCCcc------------------cccchhhhhhcccC-CceeECCEEECCCCCccceee
Confidence 999999999999999987632 23455677888765 477773 99999999985
No 64
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-55 Score=500.31 Aligned_cols=359 Identities=18% Similarity=0.246 Sum_probs=297.0
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcc-cHHHHHHHHH-HHHhH
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKE-NLLDAEEQLR-FLLHF 567 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~-~~~~~~~~l~-~~~~~ 567 (983)
|++|||++|+++.+++|++.||.++.+.. ..++.++|+|+|++|++||||+. . .+ +. +...++ .+.|.
T Consensus 1 m~~mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~Ge~~-~---~~~~~--~~~~i~~~l~~~ 70 (384)
T 2pgw_A 1 MSLVKISNVRVRPLVLPLKQPYHWSYGIR----ESFAVNLIEIEADDGTVGIGECT-V---APDQT--GTAAILYRLAKH 70 (384)
T ss_dssp ---CCEEEEEEEEEEEEEEEEEECSSSEE----EEEEEEEEEEEETTSCEEEEEEE-C---TTCHH--HHHHHHHHHHGG
T ss_pred CCCCEEEEEEEEEEecccCccceecccee----eeceEEEEEEEECCCCEEEEccC-C---CchHH--HHHHHHHHHHHH
Confidence 56699999999999999999999887654 44889999999999999999997 1 23 32 445566 48999
Q ss_pred hccCccccccccccc-CchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 568 MTGAKISYFLPLLKG-SFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 568 l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
|+|+++.++..++.. ++....+ .+.......++|++|||+||||++||.+|+|||+||||.. +++||+
T Consensus 71 l~g~d~~~~~~~~~~~l~~~~~~--~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~v~~ 139 (384)
T 2pgw_A 71 LVGHSPHDVAPLIARIFHQEYLG--HGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLGGAH---------RKAVGY 139 (384)
T ss_dssp GTTSCGGGHHHHHHHHHHHHTGG--GTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCS---------SSEEEB
T ss_pred HCCCChhHHHHHHHHHHHHHhhh--cccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcCCCC---------CCceEE
Confidence 999998876655432 2111111 0100001157899999999999999999999999999975 478999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD 726 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 726 (983)
|++++ ..+++++.+.+++++++||+.||+|+|. +++.|+++|++||+++| ++.|++|+|++|+.++|+++++.|++
T Consensus 140 ~~~~~-~~~~e~~~~~a~~~~~~Gf~~iKik~g~--~~~~~~e~v~avr~a~g-d~~l~vD~n~~~~~~~a~~~~~~l~~ 215 (384)
T 2pgw_A 140 FYFLQ-GETAEELARDAAVGHAQGERVFYLKVGR--GEKLDLEITAAVRGEIG-DARLRLDANEGWSVHDAINMCRKLEK 215 (384)
T ss_dssp CEECC-CSSHHHHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHHHTTST-TCEEEEECTTCCCHHHHHHHHHHHGG
T ss_pred EEECC-CCCHHHHHHHHHHHHHcCCCEEEECcCC--CHHHHHHHHHHHHHHcC-CcEEEEecCCCCCHHHHHHHHHHHHh
Confidence 97763 4689999999999999999999999996 68999999999999999 99999999999999999999999999
Q ss_pred CCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 727 CDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 727 ~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
+++.|||||++ +++.++++++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|++
T Consensus 216 ~~i~~iEqP~~~~~~~~~~~l~~~~~iPI~~de~i~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~ 290 (384)
T 2pgw_A 216 YDIEFIEQPTVSWSIPAMAHVREKVGIPIVADQAAFTLY-----DVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEA 290 (384)
T ss_dssp GCCSEEECCSCTTCHHHHHHHHHHCSSCEEESTTCCSHH-----HHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHH
T ss_pred cCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcCCHH-----HHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHH
Confidence 99999999998 78899999999999999999999865 35665554 579999999999999999999999999
Q ss_pred cCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccC-ccchhcccccCCCC-Cceeec----cCCCC
Q 041113 804 HGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQG-LGTYQWLKEDVTTD-PISICH----NSCRG 877 (983)
Q Consensus 804 ~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~d~~~~-p~~~~~----~P~~p 877 (983)
+|+++++|+|+|++|++++++|++++++|+. ..++ +++. +..|++.+ |+.+++ +|++|
T Consensus 291 ~g~~~~~~~~~es~i~~aa~~hlaaa~~~~~--------------~~~~~~~~~--~~~d~~~~~~~~~~~G~~~~p~~P 354 (384)
T 2pgw_A 291 AGLKICIHSSFTTGITTCAEHHIGLAIPNLD--------------DGNQIMWQL--VQEDIVSSPDLTPKNGWLDAFRKP 354 (384)
T ss_dssp TTCCEEECCCSCCHHHHHHHHHHHHHCSSBC--------------SSBCCCGGG--BSSCSEEESCCCCBTTEEECCCSS
T ss_pred CCCeEeeccCcCCHHHHHHHHHHHHhCCCcc--------------cccccccCc--hhhhhccCCCceEECCEEECCCCC
Confidence 9999999999999999999999999998631 1111 2233 36677766 787773 89999
Q ss_pred eeeEEecchhhhhhhcccc
Q 041113 878 FVEASVAKATHILQNLQIN 896 (983)
Q Consensus 878 GlGv~~d~a~~~~~~~~~~ 896 (983)
|||+++| ++.++++...
T Consensus 355 GlGv~~d--~~~l~~~~~~ 371 (384)
T 2pgw_A 355 GLGFQLA--EDLVAEGEGR 371 (384)
T ss_dssp BTCCEEC--HHHHHHHHHH
T ss_pred cCCCcCC--HHHHHHhhhh
Confidence 9999999 8888887654
No 65
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=1e-55 Score=505.76 Aligned_cols=373 Identities=15% Similarity=0.151 Sum_probs=285.4
Q ss_pred CccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECC--CCEEEEeecCcCcCcccHHHHHHHHHHHHh
Q 041113 489 SLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLED--GSVGYGEVAPLEIHKENLLDAEEQLRFLLH 566 (983)
Q Consensus 489 ~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~--G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~ 566 (983)
+|++|||++|+++.+++|++.|+..+.+.++ ....+.++|+|+||+ |++||||+.+.+... ..+...++.+.|
T Consensus 1 ~m~~mkI~~i~~~~v~~p~~~~~~~s~~~~~--~~~~~~~~V~i~Td~~dG~~G~Ge~~~~g~~~---~~~~~~i~~l~~ 75 (441)
T 4a35_A 1 SMVRGRISRLSVRDVRFPTSLGGHGADAMHT--DPDYSAAYVVIETDAEDGIKGCGITFTLGKGT---EVVVCAVNALAH 75 (441)
T ss_dssp CCCCCBEEEEEEEEEECCGGGTTCCCCSSCS--SCCCEEEEEEEEESSCSCCCEEEEEEECSTTH---HHHHHHHHHHGG
T ss_pred CCCCCEEEEEEEEEEEecCCCCCCCccceec--cCcceEEEEEEEECCCCCCEEEEeeeCCCCCh---HHHHHHHHHHHH
Confidence 4788999999999999999888765443321 123678999999998 999999998754322 233445678999
Q ss_pred HhccCcccccccccccCchhhhhh-----hcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcccccccc--
Q 041113 567 FMTGAKISYFLPLLKGSFSSWIWS-----TLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISK-- 639 (983)
Q Consensus 567 ~l~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~-- 639 (983)
.|+|+++.++..++..... .+.. ..+ +..+...+|+||||+|||||+||.+|+|||+||||..+ +.++.
T Consensus 76 ~liG~d~~~i~~~~~~~~~-~l~~~~~~~~~g-~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~r--~~i~~~~ 151 (441)
T 4a35_A 76 HVLNKDLKDIVGDFRGFYR-QLTSDGQLRWIG-PEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP--RMLVSCI 151 (441)
T ss_dssp GTTTCBHHHHHTTHHHHHH-HHHSCTTGGGGC-SSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHSCH--HHHHTTC
T ss_pred HhCCCCHHHHHHHHHHHHH-HHhhccceeecC-CCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCc--ccceecc
Confidence 9999999887654432111 1110 011 11234578999999999999999999999999999741 11110
Q ss_pred --------------------------------ccceeEEEEee--cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChH
Q 041113 640 --------------------------------RSTSIKICALI--DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPI 685 (983)
Q Consensus 640 --------------------------------~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~ 685 (983)
.+..+|+|.+. +...+++++.+++++++++||++||+|+|. +++
T Consensus 152 ~~~y~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKvG~--~~~ 229 (441)
T 4a35_A 152 DFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGA--DLQ 229 (441)
T ss_dssp CCTTTTTTCCHHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECTTCCTTCCHHHHHHHHHHHHHTTCCEEEEECSS--CHH
T ss_pred cccccccccchhhhhhhhhhcccccchhhhhhcccCcceEEeccccCCCCHHHHHHHHHHHHHCCCCEEEEcCCC--CHH
Confidence 01248899863 234589999999999999999999999997 799
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhh---cCCcEEeCCCcc
Q 041113 686 KDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEE---SGLPVALDETID 760 (983)
Q Consensus 686 ~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~---~~ipIa~dEs~~ 760 (983)
+|+++|++||+++|+++.|++|+|++|++++|+++++.|+++++.|||||++ |++++++|+++ +++||++||+++
T Consensus 230 ~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~ 309 (441)
T 4a35_A 230 DDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCH 309 (441)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGTCEEEECTTCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHhhcccCccEEeCCCCcccHHHHHHHHHhccCCCCCEEeCCccc
Confidence 9999999999999999999999999999999999999999999999999998 78889999987 899999999999
Q ss_pred CcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHH-HHHh----hchhhh
Q 041113 761 KFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYI-IFSS----YLELQN 834 (983)
Q Consensus 761 ~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~-~laa----~~~~~~ 834 (983)
+..+ +..+++. ++|++|+|++++||++++++++++|+++|++++ +|. +++++++++ |++. +++..
T Consensus 310 ~~~~-----~~~~l~~~a~div~~d~~~~GGit~~~kia~lA~~~gv~v~-~H~--~~ig~aa~~~hl~~~~~~~l~~~- 380 (441)
T 4a35_A 310 NRVI-----FKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVC-PHA--GGVGLCELVQHLIIFDYISVSAS- 380 (441)
T ss_dssp SHHH-----HHHHHHTTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCBC-CCC--CTTTHHHHHHHHHHHHHHHTSCC-
T ss_pred cHHH-----HHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEE-EeC--ChHHHHHHHHHHhhhhhcccccC-
Confidence 9753 6666654 579999999999999999999999999999965 554 466665543 4432 11100
Q ss_pred hhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 835 AYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 835 ~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
. +.. .+....+ ..+++.+|+.+++ +|++|||||++| ++.++++....
T Consensus 381 ----------~-~~~--~~E~~~~-~~~~~~~p~~~~dG~i~vp~~PGLGveld--~~~l~~~~~~~ 431 (441)
T 4a35_A 381 ----------L-ENR--VCEYVDH-LHEHFKYPVMIQRASYMPPKDPGYSTEMK--EESVKKHQYPD 431 (441)
T ss_dssp ----------C-TTC--CEEECCS-SGGGBSSCCEESSSEEECCCSSBCSCCBC--HHHHHHHBTTT
T ss_pred ----------c-ccc--eeeccch-hhhcccCCceeeCCEEECCCCCcCCcccC--HHHHHhccCCC
Confidence 0 000 0111112 2355677888874 999999999999 88888888653
No 66
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=1.7e-55 Score=498.82 Aligned_cols=352 Identities=22% Similarity=0.285 Sum_probs=293.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+.. ..++.++|+|+|++| +||||+.+. + +.++++..+...+.. +.|.|
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~v~v~td~G-~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l 75 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQ----SVRELLLLRAVTPAG-EGWGECVTMAGPLYSSEYNDGAEHVLRHYLIPAL 75 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEECSSC-EEEEECCCBSSSSSSSCBHHHHHHHHHHTHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEE----ecccEEEEEEEeCCC-EEEEEecCCCCCccccCcHHHHHHHHHHHHHHHH
Confidence 69999999999999999999888654 448899999999999 999999865 2 556776666666655 88999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+...++. .+.. ....++|++|||+||||++||..|+|||+||||.+ .+++.+.
T Consensus 76 ~g~d~~~~~~l~~---------~~~~--~~g~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~----------~~~~~~~ 134 (368)
T 1sjd_A 76 LAAEDITAAKVTP---------LLAK--FKGHRMAKGALEMAVLDAELRAHERSFAAELGSVR----------DSVPCGV 134 (368)
T ss_dssp HHSSSCCHHHHHH---------HHTT--SCSCHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCC----------SEEEBEE
T ss_pred cCCCcCCHHHHHH---------HHHH--hcCCHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CCccceE
Confidence 9998766433321 1110 01146799999999999999999999999999965 3466555
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+++...+++++.+.+++++++||+++|+|++ ++.|+++|++||+++|+++.|++|+|++|+.++ +++++.|++++
T Consensus 135 ~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~----~~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-~~~~~~l~~~~ 209 (368)
T 1sjd_A 135 SVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE----PGWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-APQLARLDPFG 209 (368)
T ss_dssp EECCCSCHHHHHHHHHHHHHHTCSEEEEECB----TTBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-HHHHHTTGGGC
T ss_pred EeeCCCCHHHHHHHHHHHHHhCccEEEEecC----chhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-HHHHHHHHhcC
Confidence 5432258999999999999999999999995 467899999999999999999999999999999 99999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|+++|
T Consensus 210 i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 284 (368)
T 1sjd_A 210 LLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSAR-----AAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHG 284 (368)
T ss_dssp CSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHH-----HHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred CCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHH-----HHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcC
Confidence 999999998 78899999999999999999998865 36666654 47999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCceeec----cCCCCeee
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
++++++|++||+|++++++|++ +++|+. .++.++. ..++.+|+ .+|+.+++ +|++||||
T Consensus 285 ~~~~~~~~~es~i~~aa~~hla-a~~~~~--------------~~~e~~~~~~~~~~d~-~~~~~~~~G~~~~p~~PGlG 348 (368)
T 1sjd_A 285 IPVWCGGMIETGLGRAANVALA-SLPNFT--------------LPGDTSASDRFYKTDI-TEPFVLSGGHLPVPTGPGLG 348 (368)
T ss_dssp CCEEECCCCCCHHHHHHHHHHH-TSTTBC--------------SCBSCCCGGGTCSSCS-SSCCCCSSSEEECCCSSBTS
T ss_pred CcEEeCCccccHHHHHHHHHHH-cCCCCC--------------cccccCCchhhhhhcC-CCCceEECCEEECCCCCcCC
Confidence 9999999999999999999999 888531 1122222 24567788 78888873 89999999
Q ss_pred EEecchhhhhhhcccccc
Q 041113 881 ASVAKATHILQNLQINND 898 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~~ 898 (983)
+++| ++.++++.+...
T Consensus 349 v~~d--~~~l~~~~~~~~ 364 (368)
T 1sjd_A 349 VAPI--PELLDEVTTAKV 364 (368)
T ss_dssp CCCC--HHHHHHHEEEEE
T ss_pred ceeC--HHHHHhheeeee
Confidence 9999 888888776543
No 67
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=2.5e-55 Score=498.37 Aligned_cols=352 Identities=20% Similarity=0.219 Sum_probs=285.0
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++||+.||.++.+.. +.++.++|+|+| +|++||||+.+. + +.++++..+...+.. +.|.+
T Consensus 8 mkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~V~v~t-dG~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l 82 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQ----THKVVPLLILHG-EGVQGVAEGTMEARPMYREETIAGALDLLRGTFLPAI 82 (375)
T ss_dssp EECCEEEEEEEEEEBC--------------CEEEEEEEEEEE-TTEEEEEECCCBSSSSSSSCBHHHHHHHHHHTHHHHH
T ss_pred cEEEEEEEEEEeeecCCCeEecceEE----eeccEEEEEEEE-CCeEEEEEEecCCCCcccCCCHHHHHHHHHHHHHHHH
Confidence 89999999999999999999988764 348899999999 599999999865 2 456776666666654 88999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+...++. .+.. ....++|++|||+||||++||..|+|||+||||.+ .+++.+.
T Consensus 83 ~g~d~~~~~~l~~---------~~~~--~~g~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~----------~~~~~~~ 141 (375)
T 1r0m_A 83 LGQTFANPEAVSD---------ALGS--YRGNRMARAMVEMAAWDLWARTLGVPLGTLLGGHK----------EQVEVGV 141 (375)
T ss_dssp TTCEESSHHHHHH---------TTTT--SCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHTCCC----------SEEEBCE
T ss_pred cCCCcCCHHHHHH---------HHHH--ccCchHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceeeeE
Confidence 9998766443332 1110 11146799999999999999999999999999965 3455554
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+++...+++++.+.+++++++||++||+|++ ++.|++++++||+++ +++.|++|+|++|+.++ +++++.|++++
T Consensus 142 ~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~----~~~d~~~v~avr~a~-~~~~l~vDan~~~~~~~-~~~~~~l~~~~ 215 (375)
T 1r0m_A 142 SLGIQADEQATVDLVRRHVEQGYRRIKLKIK----PGWDVQPVRATREAF-PDIRLTVDANSAYTLAD-AGRLRQLDEYD 215 (375)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSCEEEECB----TTBSHHHHHHHHHHC-TTSCEEEECTTCCCGGG-HHHHHTTGGGC
T ss_pred EecCCCCHHHHHHHHHHHHHhcccEEEEecC----hHHHHHHHHHHHHHc-CCCeEEEeCCCCCCHHH-HHHHHHHHhCC
Confidence 4432258999999999999999999999995 467899999999999 99999999999999999 99999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++++.. .+..+++. .+|++++|++++||++++++++++|+++|
T Consensus 216 i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 290 (375)
T 1r0m_A 216 LTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASAS-----DARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFG 290 (375)
T ss_dssp CSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHH-----HHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred CcEEECCCCcccHHHHHHHHHhCCCCEEecCccCCHH-----HHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcC
Confidence 999999998 78899999999999999999998865 36665554 47999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCceeec----cCCCCeee
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
+++|++|++||+|++++++|++ +++|.. .++.++. ..++.+|++.+|+.+++ +|++||||
T Consensus 291 ~~~~~~~~~es~i~~aa~~hla-a~~~~~--------------~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlG 355 (375)
T 1r0m_A 291 APVWCGGMLESGIGRAHNIHLS-TLSNFR--------------LPGDTSSASRYWERDLIQEPLEAVDGLMPVPQGPGTG 355 (375)
T ss_dssp CCEEECCCCCCHHHHHHHHHHT-TSTTBC--------------SCBSCCCGGGTBSSCSBSSCCCCBTTEEECCCSSBTS
T ss_pred CcEEecCccccHHHHHHHHHHH-cCCCCC--------------cccccCCchhhhhhhcccCCceEECCEEECCCCCcCC
Confidence 9999999999999999999999 888531 1122222 24567888888888874 89999999
Q ss_pred EEecchhhhhhhcccccc
Q 041113 881 ASVAKATHILQNLQINND 898 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~~ 898 (983)
+++| ++.++++.+...
T Consensus 356 v~~d--~~~l~~~~~~~~ 371 (375)
T 1r0m_A 356 VTLD--REFLATVTEAQE 371 (375)
T ss_dssp CCBC--HHHHHHTEEEEE
T ss_pred CccC--HHHHhhheeeeE
Confidence 9999 888888776543
No 68
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=4.1e-55 Score=498.61 Aligned_cols=348 Identities=15% Similarity=0.202 Sum_probs=273.4
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l 568 (983)
|+.|||++|+++.++ + .++.++|||+||+|++||||+.. ..+ .+...+. .+.|.|
T Consensus 1 m~~mkIt~v~~~~~~-----~-------------~~~~~~V~v~td~G~~G~GE~~~---~~~---~~~~~i~~~l~p~l 56 (410)
T 3dip_A 1 MSLPRITALRTIRLP-----E-------------RPKLIWVEVETEDGLTGLGETFR---GAQ---AVEAVLHEQTAPAI 56 (410)
T ss_dssp --CCBEEEEEEEEET-----T-------------EEEEEEEEEEETTSCEEEEEEES---CHH---HHHHHHHHTHHHHH
T ss_pred CCCCeEEEEEEEEEC-----C-------------CCCEEEEEEEECCCCEEEEeCCC---ChH---HHHHHHHHHHHHHh
Confidence 677999999987653 0 16789999999999999999432 122 2334444 489999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..++.. ..+....+...+|++|||||||||+||.+|+|||+||||.. +++|++|+
T Consensus 57 iG~dp~~~e~~~~~~~~~----~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~ya 123 (410)
T 3dip_A 57 IGRAAENITSISSELLNP----YVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALGGAA---------RDRVPVYA 123 (410)
T ss_dssp TTSBTTCHHHHHHHHTCC----SSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSEEEEEE
T ss_pred cCCCcchHHHHHHHHHHH----HHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCCc---------CCceeEEE
Confidence 999999876665432210 01222335677999999999999999999999999999986 58899997
Q ss_pred eecCC----------------------CCHHH----HHHHHHHhhhcCCCEEEE--------eccCCC---ChHHHHHHH
Q 041113 649 LIDSN----------------------KSPVE----VASIATTLVEEGFTAIKL--------KVARRA---DPIKDAEVI 691 (983)
Q Consensus 649 ~~~~~----------------------~~~~~----~~~~~~~~~~~G~~~~Ki--------Kig~~~---~~~~d~~~v 691 (983)
++... .++++ ..+.+++++++||++||+ |+|... +++.|+++|
T Consensus 124 s~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v 203 (410)
T 3dip_A 124 TCAGYDFNTSLGGRRSIGSAELSTGPYDDQVAFMRDAGVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPF 203 (410)
T ss_dssp EECTTTC----------------------------CHHHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHH
T ss_pred ecccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHH
Confidence 65321 12222 245667888999999999 988521 356899999
Q ss_pred HHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecC-CC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHH
Q 041113 692 QEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEP-VQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLN 768 (983)
Q Consensus 692 ~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP-~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~ 768 (983)
++||+++|+++.|++|+|++||+++|+++++.|+++++.||||| ++ +.+++++|++++++||++||++.+..+
T Consensus 204 ~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~---- 279 (410)
T 3dip_A 204 RKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRR---- 279 (410)
T ss_dssp HHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHH----
T ss_pred HHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHH----
Confidence 99999999999999999999999999999999999999999999 78 788999999999999999999998753
Q ss_pred HHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCC
Q 041113 769 MLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCP 847 (983)
Q Consensus 769 ~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~ 847 (983)
+..+++. .+|++|+|++++||++++++++++|+++|++++++++ ++|++++++||++++||+. . .++ . .
T Consensus 280 -~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~--s~i~~aa~~hlaaa~pn~~--~---~e~-~-~ 349 (410)
T 3dip_A 280 -FHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHXT--GPVALMAGLHLALHAPTAI--F---QEV-V-R 349 (410)
T ss_dssp -HHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS--CHHHHHHHHHHHHHCTTBC--C---EEE-E-C
T ss_pred -HHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeCc--cHHHHHHHHHHHHhCCCCe--E---EEe-c-c
Confidence 6666654 4799999999999999999999999999999887776 9999999999999999641 1 110 0 0
Q ss_pred CCccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 848 PVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 848 ~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
.+...+.+|++.+|+.+++ +|++|||||++| ++.++++++.
T Consensus 350 ------~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d--~~~l~~~~~~ 394 (410)
T 3dip_A 350 ------ASLATWYADLVDHLPVIQEGIALAPTRPGLGTALL--PHVRKIAGAV 394 (410)
T ss_dssp ------TTSCCTHHHHBSCCCCEETTEEECCCSSBTSCCBC--TTGGGSTTCE
T ss_pred ------ccCchhHHhhcCCCCcccCCEEECCCCCCCCcccC--HHHHhccCce
Confidence 0122334567777888874 999999999999 7777776543
No 69
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=2.2e-55 Score=499.39 Aligned_cols=361 Identities=13% Similarity=0.089 Sum_probs=285.8
Q ss_pred ccceeEeEEEEEEEEeeCCC----------------CCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCccc
Q 041113 490 LSICKICRMEYSLYRIQLCA----------------PPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKEN 553 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~----------------p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~ 553 (983)
.+.|||++|+.+.+..+-.. .+..+.+++ ..++.++|||+||+|++||||+.+.+.
T Consensus 20 ~~~m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~----~~~~~~lV~v~td~G~~G~GE~~~~~~---- 91 (412)
T 3stp_A 20 FQSMKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSF----RFHQWLTCEVETEDGTIGIGNAALAPS---- 91 (412)
T ss_dssp ---CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTT----CCCEEEEEEEEETTSCEEEEEECSSHH----
T ss_pred eeccEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEE----EeccEEEEEEEECCCCEEEEeccCCHH----
Confidence 34579999999998763211 112233332 237889999999999999999965431
Q ss_pred HHHHHHHHHH-HHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCc
Q 041113 554 LLDAEEQLRF-LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTE 632 (983)
Q Consensus 554 ~~~~~~~l~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~ 632 (983)
.+...++. +.|.|+|+++.+++.++..++....+ .+ ..+...+|++|||||||||+||.+|+|||+||||..
T Consensus 92 --~~~~~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~~--~g--~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~- 164 (412)
T 3stp_A 92 --VVKKVIDDWYAPLVIGEDPFDYAYIWEKMYRRSHA--WG--RKGIGMTAISAIDIAIWDLMGKLVGKPVFKLLGGRT- 164 (412)
T ss_dssp --HHHHHHHHTTHHHHTTSCGGGHHHHHHHHHHHTHH--HH--SSTHHHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCS-
T ss_pred --HHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHhhh--cC--CcchHHHHHHHHHHHHHHHHhhhcCCCHHHhcCCCC-
Confidence 23445555 88999999999877766543221111 11 124578999999999999999999999999999985
Q ss_pred cccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC-----CChHHHHHHHHHHHHHcCCCcEEEEE
Q 041113 633 IDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARR-----ADPIKDAEVIQEVRKKVGHRIELRVD 707 (983)
Q Consensus 633 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~-----~~~~~d~~~v~~vr~~~g~~~~l~vD 707 (983)
+++||+|++.....+++++++++++++++||++||+|+|.+ .+++.|+++|++||+++|+++.|++|
T Consensus 165 --------r~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 165 --------KDRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp --------SSSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred --------CceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 57899999854557899999999999999999999999852 12478999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEc
Q 041113 708 ANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIK 784 (983)
Q Consensus 708 aN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k 784 (983)
+|++|++++|+++++.|+++++.|||||++ +++++++|++++++||++||++.+..+ +..+++. .+|++|+|
T Consensus 237 aN~~~~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~li~~~a~D~v~ik 311 (412)
T 3stp_A 237 CYMGWNLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAMNIVPISGGEHEFSVIG-----CAELINRKAVSVLQYD 311 (412)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHH-----HHHHHHTTCCSEECCC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhCCCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEecC
Confidence 999999999999999999999999999998 788999999999999999999998753 6666654 47999999
Q ss_pred CCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCC
Q 041113 785 PSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVT 864 (983)
Q Consensus 785 ~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~ 864 (983)
++++||++++++++++|+++|+++++|+ +.++++|++++.+|.. . .++ .+. .++++...+.+|++
T Consensus 312 ~~~~GGit~a~kia~~A~a~gi~v~~h~------~~aa~~hlaaA~~~~~--~---~e~--~~~--~d~~~~~~l~~~~~ 376 (412)
T 3stp_A 312 TNRVGGITAAQKINAIAEAAQIPVIPHA------GQMHNYHLTMANTNCP--I---SEY--FPV--FDVEVGNELFYYIF 376 (412)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTCCBCCSS------CSHHHHHHHHTCTTCC--C---EEE--CCC--CSSSSSTTTHHHHE
T ss_pred hhhcCCHHHHHHHHHHHHHcCCEEEecc------HHHHHHHHHHhCCCCc--e---EEe--ccc--ccccccchhhhhhc
Confidence 9999999999999999999999988766 5789999998877531 1 111 110 12233344556677
Q ss_pred CCCceeec----cCCC-CeeeEEecchhhhhhhccc
Q 041113 865 TDPISICH----NSCR-GFVEASVAKATHILQNLQI 895 (983)
Q Consensus 865 ~~p~~~~~----~P~~-pGlGv~~d~a~~~~~~~~~ 895 (983)
.+|+.+++ +|++ |||||++| ++.++++++
T Consensus 377 ~~~~~~~~G~i~vp~~~PGlGveld--~~~l~~~~~ 410 (412)
T 3stp_A 377 EGDPEAVDGYLQLDDDLPGLGIAIS--DKHLQHFDI 410 (412)
T ss_dssp ECCCCCBTTEECCCSSSCBTSCEEC--CTTGGGEEE
T ss_pred cCCCcccCCEEEcCCCCCcccccCC--HHHHHhccc
Confidence 77777773 9999 99999999 788888765
No 70
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-55 Score=498.60 Aligned_cols=353 Identities=20% Similarity=0.240 Sum_probs=293.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc--C-cCcccHHHHHHHHHH-HHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL--E-IHKENLLDAEEQLRF-LLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~--~-~~~~~~~~~~~~l~~-~~~~l 568 (983)
|||++|+++.+++|++.||.++.+.. +.++.++|+|+| +|.+||||+.+. + +.++++.++...+.. +.|.+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~V~v~t-dG~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l 75 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQ----TKRTILLLRLFG-EGLEGLGEGVMERLPLYREETVAGARYLLEEVFLPRV 75 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEE-TTEEEEEECCCBSSCSSSSCBHHHHHHHHHHTHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEE----eeCcEEEEEEEE-CCeEEEEEeccCCCCcccCCCHHHHHHHHHHHHHHHH
Confidence 69999999999999999999888754 458899999999 599999999865 2 456776666666655 89999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+...++. .+.. ....++|++|||+||||++||..|+|||+||||.+ .+++.+.
T Consensus 76 ~G~d~~~~~~l~~---------~~~~--~~g~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~----------~~~~~~~ 134 (369)
T 2zc8_A 76 LGRDLPNPEALRE---------ALAP--FRGNPMAKAVLEMAFFDLWAKALGRPLWQVLGGVR----------QAVEVGV 134 (369)
T ss_dssp TTCBCSSHHHHHH---------HHTT--SCSCHHHHHHHHHHHHHHHHHHTTSBHHHHHTCCC----------SEEEBCE
T ss_pred cCCCcCCHHHHHH---------HHHH--hcCChHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceeceE
Confidence 9998766433322 1110 01146799999999999999999999999999965 3455554
Q ss_pred eecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 649 LIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+++...+++++.+.+++++++||++||+|++ +++|++++++||+++ +++.|++|+|++|+.++ +++++.|++++
T Consensus 135 ~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~----~~~d~~~v~avr~a~-~~~~l~vDan~~~~~~~-~~~~~~l~~~~ 208 (369)
T 2zc8_A 135 SLGIQPSVEDTLRVVERHLEEGYRRIKLKIK----PGWDYEVLKAVREAF-PEATLTADANSAYSLAN-LAQLKRLDELR 208 (369)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSCEEEECB----TTBSHHHHHHHHHHC-TTSCEEEECTTCCCGGG-HHHHHGGGGGC
T ss_pred EecCCCCHHHHHHHHHHHHHhhhheeeeecC----hhHHHHHHHHHHHHc-CCCeEEEecCCCCCHHH-HHHHHHHHhCC
Confidence 4432258999999999999999999999995 467899999999999 99999999999999999 99999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++|++++++||++||++++.. .+..+++. .+|++++|++++||++++++++++|+++|
T Consensus 209 i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 283 (369)
T 2zc8_A 209 LDYIEQPLAYDDLLDHAKLQRELSTPICLDESLTGAE-----KARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAG 283 (369)
T ss_dssp CSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHH-----HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTT
T ss_pred CcEEECCCCcccHHHHHHHHhhCCCCEEEcCccCCHH-----HHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcC
Confidence 999999998 78899999999999999999998875 36666654 47999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCceeec----cCCCCeee
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
+++|++|+++++|++++++|++ +++|+. .++.++. ..++.+|++.+|+.+++ +|++||||
T Consensus 284 ~~~~~~~~~es~i~~aa~~hla-a~~~~~--------------~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlG 348 (369)
T 2zc8_A 284 IPLWMGGMLEAGVGRAHNLHLA-TLPGFT--------------KPGDVSSASRYWEEDIVEEALEAKDGLMPVPEGVGIG 348 (369)
T ss_dssp CCEEECCCCCCHHHHHHHHHHT-TSTTBC--------------SCBSCCCGGGTBSSCSBSSCCCCBTTEEECCCSSBTC
T ss_pred CcEEecCccccHHHHHHHHHHH-cCCCCC--------------cccccCCcchhhhhccccCCcEEECCEEECCCCCcCC
Confidence 9999999999999999999999 887531 1112222 24567888888888874 89999999
Q ss_pred EEecchhhhhhhccccccc
Q 041113 881 ASVAKATHILQNLQINNDV 899 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~~~ 899 (983)
+++| ++.++++.+....
T Consensus 349 v~~d--~~~l~~~~~~~~~ 365 (369)
T 2zc8_A 349 VHLK--LPFVERVTLWQRY 365 (369)
T ss_dssp CCBC--HHHHHHTEEEEEE
T ss_pred cccC--HHHHhhceEEEEE
Confidence 9999 8888887765433
No 71
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=1e-54 Score=496.58 Aligned_cols=347 Identities=16% Similarity=0.151 Sum_probs=275.9
Q ss_pred cceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHhc
Q 041113 491 SICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFMT 569 (983)
Q Consensus 491 ~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l~ 569 (983)
++|||++|+++.+. | .++.++|||+||+|++||||+.+.+ ++. .+...++ .+.|.|+
T Consensus 21 ~~mkIt~v~~~~~~-----~-------------~~~~v~V~v~td~Gi~G~GE~~~~g---~~~-~~~~~l~~~l~p~Li 78 (426)
T 4e4f_A 21 QSMKIVSAEVFVTC-----P-------------GRNFVTLKITTDSGLTGLGDATLNG---REL-PVASYLNDHVCPQLI 78 (426)
T ss_dssp -CCBEEEEEEEEEC-----S-------------SSCEEEEEEEETTSCEEEEECCCTT---CHH-HHHHHHHHTHHHHHT
T ss_pred cCcEEEEEEEEEEc-----C-------------CCCEEEEEEEECCCCEEEEecccCC---CcH-HHHHHHHHHHHHHHc
Confidence 45899999987542 1 1568999999999999999987543 211 2334454 4789999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.+++.++..++ ............+|++|||+|||||+||.+|+|||+||||.. +++|++|++
T Consensus 79 G~dp~~ie~i~~~l~-----~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~y~~ 144 (426)
T 4e4f_A 79 GRDAHQIEDIWQYFY-----KGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGAS---------RTGVMVYCH 144 (426)
T ss_dssp TSBTTCHHHHHHHHH-----HHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCS---------SSSEEEEEE
T ss_pred CCChhhHHHHHHHHH-----hhccccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcCCCC---------CCceeEeEe
Confidence 999998777664322 111111223467899999999999999999999999999986 578999998
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC---------------------------------hHHHHHHHHHHHH
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRAD---------------------------------PIKDAEVIQEVRK 696 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~---------------------------------~~~d~~~v~~vr~ 696 (983)
.. ..+++++.+++++++++||++||+|+|.+.. .+.+++++++||+
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~ 223 (426)
T 4e4f_A 145 TT-GHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRD 223 (426)
T ss_dssp EC-CSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 63 4688999999999999999999999985210 1225789999999
Q ss_pred HcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhc
Q 041113 697 KVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYA 774 (983)
Q Consensus 697 ~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~ 774 (983)
++|+++.|++|+|++||+++|+++++.|+++++.|||||++ +++.+++|++++++||++||++++..+ +..++
T Consensus 224 a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i 298 (426)
T 4e4f_A 224 KFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPTPAENQACFRLIRQHTVTPIAVGEVFNSIWD-----CKQLI 298 (426)
T ss_dssp HHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHTTCCSCEEECTTCCSGGG-----THHHH
T ss_pred HhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChHHHHHHHHHHhcCCCCEEeCCCcCCHHH-----HHHHH
Confidence 99999999999999999999999999999999999999998 788999999999999999999999875 45555
Q ss_pred CC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCC-CCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccC
Q 041113 775 HP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSA-AFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQG 852 (983)
Q Consensus 775 ~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~-~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g 852 (983)
+. .+|++|+|++++||++++++++++|+++|++++.++ +.+|+|++++++|+++++||+. . .++. +
T Consensus 299 ~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~h~~~~~s~i~~aa~~hlaaa~pn~~--~---~e~~-------~ 366 (426)
T 4e4f_A 299 EEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLSPICMAAALHFDLWVPNFG--V---QEYM-------G 366 (426)
T ss_dssp HTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEE--E---EECC-------C
T ss_pred HcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeeeCCCCccHHHHHHHHHHHHhCCCce--e---Eeec-------C
Confidence 44 579999999999999999999999999999987655 4589999999999999999742 1 1111 0
Q ss_pred ccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 853 LGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 853 ~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
. . .++. +++.+++.+++ +|++|||||++| ++.++++...
T Consensus 367 ~-~-~~~~-~~~~~~~~~~~G~i~~p~~PGLGve~d--e~~~~~~~~~ 409 (426)
T 4e4f_A 367 Y-S-EQML-EVFPHSWTFDNGYMHPGEKPGLGIEFD--EKLAAKYPYD 409 (426)
T ss_dssp C-C-HHHH-HHSCCCCEEETTEEECCSSSBTCCCCC--HHHHTTSCCC
T ss_pred c-c-hhhH-hhcCCCceeeCCEEECCCCCCCCcccC--HHHHHhccCc
Confidence 1 1 1111 34456787774 999999999999 8888888754
No 72
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=3.8e-55 Score=495.46 Aligned_cols=350 Identities=15% Similarity=0.120 Sum_probs=284.7
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHH-HHHHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQL-RFLLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l-~~~~~~l 568 (983)
|++|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|+ |++||||+.+. ++ +...+ +.++|.|
T Consensus 3 ~~~mkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~v~V~v~td-G~~G~Ge~~~~----~~---~~~~i~~~l~~~l 70 (372)
T 3cyj_A 3 LSGPRVERLEVSAYTVPTDYPESDGTLQW----DSTTMILVEAHGG-GRKGLGYTYGD----VS---VGRFVESKLAGVA 70 (372)
T ss_dssp ---CBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEET-TEEEEEEEESC----TH---HHHHHHHHTHHHH
T ss_pred CCCCEEeEEEEEEEeccCCCcccCccccc----ccccEEEEEEEeC-CcEEEEeccCc----HH---HHHHHHHHHHHHH
Confidence 45689999999999999999998887653 3488999999999 99999999752 22 23334 3588999
Q ss_pred ccCcccccccccccCchhhhhhhc-CCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTL-GIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
+|+++.+...++..+ ...+ +....+..++|++|||+||||+.||..|+|||+||||.+ ++||+|
T Consensus 71 ~g~d~~~~~~i~~~l-----~~~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~----------~~vp~~ 135 (372)
T 3cyj_A 71 EGSDALSPPAVWARM-----QAAIRNAGRPGVGAMAVSAVDIALWDLKARLLGLPLADALPRFH----------AEVPVY 135 (372)
T ss_dssp TTSBTTCHHHHHHHH-----HHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSCCCC----------SSEEEE
T ss_pred cCCCcccHHHHHHHH-----HHHHHhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHhCCCC----------CCceEE
Confidence 999987765544321 1111 111234467899999999999999999999999999974 579999
Q ss_pred EeecCC-CCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc
Q 041113 648 ALIDSN-KSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD 726 (983)
Q Consensus 648 ~~~~~~-~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 726 (983)
++++.. .+++++.+++++++++||++||+|+|. ++++|+++|++||+++|+++.|++|+|++|++++|+++++.|++
T Consensus 136 ~~~g~~~~~~~~~~~~a~~~~~~G~~~~KiKvG~--~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 213 (372)
T 3cyj_A 136 GSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGR--EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYWAGAFAR 213 (372)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCS--SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC--CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 886322 356889999999999999999999996 78999999999999999999999999999999999999999999
Q ss_pred C-CCceeecCCC--ChHHHHHHHhhcC--CcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 727 C-DLQYIEEPVQ--NEEDIIKYCEESG--LPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 727 ~-~i~~iEeP~~--~~~~~~~l~~~~~--ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
| ++.|||||++ |++++++|+++++ +||++||++++..+ +..+ ...+|++|+|++++||++++++++++|
T Consensus 214 ~~~i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~-----~~~~-~~a~d~i~ik~~~~GGit~~~~i~~~A 287 (372)
T 3cyj_A 214 EAGISYLEEPVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQ-----LHDL-AGCVDILQADVTRCGGITGLLRVDGIC 287 (372)
T ss_dssp HHCCCEEECSSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHH-----HHHH-HTTCSEEEECTTTTTHHHHHTTHHHHH
T ss_pred hcCCcEEECCCCcccHHHHHHHHHhCCCCCCEECCCCccCHHH-----HHHH-hCCCCEEecCchhhCCHHHHHHHHHHH
Confidence 9 9999999998 8899999999988 79999999998753 5666 566899999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cC-CC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NS-CR 876 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P-~~ 876 (983)
+++|+++++|++ .++++|++++++|+. . . ++ +.....+..|++.+|+.+++ +| ++
T Consensus 288 ~~~gi~~~~~~~------~~a~lhlaaa~~~~~--~---~--e~-------~~~~~~~~~~~~~~~~~~~~G~~~~p~~~ 347 (372)
T 3cyj_A 288 RGHQIPFSAHCA------PAVSAHACCAVESLL--H---L--EY-------FHDHARVERLLFDGTLDPEGGSLRPDPDR 347 (372)
T ss_dssp HHHTCCEEECSC------HHHHHHHGGGCTTEE--E---E--EE-------EHHHHHHHHHHEECCCCCGGGEECCCTTS
T ss_pred HHcCCeecccch------HHHHHHHHHhCCCCc--e---e--ec-------cCCchhhhhHhhcCCCcccCcEEEcCCCC
Confidence 999999998886 457999999998631 1 0 00 11122345677677887773 89 99
Q ss_pred CeeeEEecchhhhhhhcccc
Q 041113 877 GFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 877 pGlGv~~d~a~~~~~~~~~~ 896 (983)
||||+++| ++.++++...
T Consensus 348 PGlGv~~d--~~~l~~~~~~ 365 (372)
T 3cyj_A 348 PGLGLELK--RSEAGKYAAE 365 (372)
T ss_dssp CBTCCEEC--HHHHHHHBC-
T ss_pred CcccceEC--HHHHHHHHhh
Confidence 99999999 8888777644
No 73
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=1.4e-54 Score=498.91 Aligned_cols=357 Identities=15% Similarity=0.160 Sum_probs=284.9
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
+|||++|+++.+..| ..+..++.+.+. ...+.++|+|+||+|++||||+.+ .+. +...++.++|.|+|+
T Consensus 7 ~~~It~i~~~~v~~~-d~~~~~~~g~h~---p~~~~~~V~i~td~Gi~G~GE~~~----~~~---v~~~i~~l~p~LiG~ 75 (470)
T 3p0w_A 7 TPRVTEMQVIPVAGR-DSMLLNLCGAHA---PFFTRNLVILKDNAGRTGVGEVPG----GEG---IRQALERVIPLVVGQ 75 (470)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEEETTSCEEEEEEEC----CHH---HHHHHHHTGGGTTTC
T ss_pred CCeEEEEEEEEecCC-CcccccccccCC---CcceEEEEEEEECCCCEEEEeCCC----hHH---HHHHHHHHHHHhCCC
Confidence 479999999999988 556655655432 236789999999999999999853 222 344567789999999
Q ss_pred cccccccccccCchhhhhhh-cC----------C-CCC---cc------hhhHHHHHHHHHHHHHHHHcCCChhhhcC-C
Q 041113 572 KISYFLPLLKGSFSSWIWST-LG----------I-PAC---EI------FPSVRCGLEMAILNAIAVKHGSSFLNILY-P 629 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~-~~----------~-~~~---~~------~~~a~~aid~AlwDl~gk~~g~pv~~lLG-g 629 (983)
++.+++.++..++....+.. -| . .+. +. ..+|++|||+|||||+||.+|+|||+||| |
T Consensus 76 d~~~ie~i~~~~~~~~~~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG 155 (470)
T 3p0w_A 76 SIGRTNGVLSSIRRALAGGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLDLLGQFLEVPVAELLGAG 155 (470)
T ss_dssp BGGGHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHHTSBGGGTSTTS
T ss_pred ChhhHHHHHHHHHHHHhhcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCC
Confidence 99988777654332111100 00 0 000 00 24899999999999999999999999999 6
Q ss_pred CCccccccccccceeEEEEeec----------------------------CCCCHHHHHHHHHHhhh-cCCCEEEEeccC
Q 041113 630 LTEIDEEISKRSTSIKICALID----------------------------SNKSPVEVASIATTLVE-EGFTAIKLKVAR 680 (983)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~~~~~~~~-~G~~~~KiKig~ 680 (983)
+. +++|++|++.. ...++++++++++++++ +||++||+|+|.
T Consensus 156 ~~---------r~~v~~y~~~~~~gd~~~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~ 226 (470)
T 3p0w_A 156 QQ---------RDSAPMLAYLFYVGDRRKTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAATERYGFADFKLKGGV 226 (470)
T ss_dssp CC---------CSEEEBCEEECCBCCGGGSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CC---------CCeEEEeeeeccccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 65 58899987631 12579999999999998 699999999997
Q ss_pred CCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--C----hHHHHHHHhhcCCcEE
Q 041113 681 RADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--N----EEDIIKYCEESGLPVA 754 (983)
Q Consensus 681 ~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~----~~~~~~l~~~~~ipIa 754 (983)
.++++|+++|++||+++ |++.||||+|++||+++|+++++.|+++ +.|||||++ | .+++++|++++++|||
T Consensus 227 -~~~~~Di~rv~avRea~-pd~~L~vDaN~~w~~~~Ai~~~~~Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa 303 (470)
T 3p0w_A 227 -MPGAEEMEAIAAIKARF-PHARVTLDPNGAWSLNEAIALCKGQGHL-VAYAEDPCGPEAGYSGREVMAEFKRATGIPTA 303 (470)
T ss_dssp -SCHHHHHHHHHHHHHHC-TTSEEEEECTTBBCHHHHHHHHTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEE
T ss_pred -CCHHHHHHHHHHHHHhC-CCCeEEeeCCCCCCHHHHHHHHHhcccc-ceeecCCCChhhccchHHHHHHHHhcCCCCEE
Confidence 37899999999999997 8999999999999999999999999999 999999998 4 5789999999999999
Q ss_pred eCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhh
Q 041113 755 LDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQ 833 (983)
Q Consensus 755 ~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~ 833 (983)
+||++.+.. .+..+++.+ +|++|+|+ ++|||+++++++++|+++|++++.+++.+++|++++++|+++++||.
T Consensus 304 ~dE~~~~~~-----~~~~~l~~~a~div~~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~e~~I~~aA~~hlaaa~pn~ 377 (470)
T 3p0w_A 304 TNMIATDWR-----QMGHAVQLHAVDIPLADP-HFWTMQGSVRVAQLCDEWGLTWGSHSNNHFDVSLAMFTHVAAAAPGN 377 (470)
T ss_dssp ESSSSCSHH-----HHHHHHHTTCCSEEBCCH-HHHCHHHHHHHHHHHHHHTCCCBCCCCSCCHHHHHHHHHHHHTCCSC
T ss_pred eCCccCCHH-----HHHHHHHcCCCCEEEecC-ccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc
Confidence 999988864 355556544 79999999 79999999999999999999988888889999999999999999863
Q ss_pred hhhhhhhccccCCCCCccCccchhcc---cccCCCCCceeec----cCCCCeeeEEecchhhhhhhccc
Q 041113 834 NAYLCKVMNRELCPPVAQGLGTYQWL---KEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~g~~~~~~~---~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~ 895 (983)
. ..++.+..+ ..+++.+|+.+++ +|++|||||++| ++.++++..
T Consensus 378 --~--------------~~~d~~~~~~~~~~~l~~~p~~~~dG~i~vP~~PGLGveld--~~~l~~~~~ 428 (470)
T 3p0w_A 378 --I--------------TAIDTHWIWQEAQERLTREPLRIQGGHVAVPERPGLGIEID--MDRVMAAHA 428 (470)
T ss_dssp --C--------------CCBCCCHHHHTTTCCCBSSCCCEETTEEECCSSSBTSCCBC--HHHHHHHHH
T ss_pred --c--------------eeeccccccccchhhhcCCCceeECCEEECCCCCCcCceeC--HHHHHHhhh
Confidence 0 011221111 2477788888874 999999999999 777766543
No 74
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.8e-54 Score=496.74 Aligned_cols=358 Identities=17% Similarity=0.167 Sum_probs=290.6
Q ss_pred ceeEeEEEEEEEEeeCCCCCcccccc--ccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHh
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYID--HNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFM 568 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~--~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l 568 (983)
.|||++|+++.+++|++.||.++.+. . ..++.++|+|+|++|++||||+.+ + ++.+.+...++ .+.|.|
T Consensus 38 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~----~~~~~v~V~v~td~G~~G~GE~~~-g---~~~~~~~~~i~~~l~p~l 109 (428)
T 3bjs_A 38 DMKITKINAIPLSYRLPEGKTVTMGVGST----IKRDAIIIRVETSEGITGYGEAHP-G---RSPGAITSLIHNTIAPML 109 (428)
T ss_dssp -CBEEEEEEEEEEEECC---CCBCSSCBC----SEEEEEEEEEEETTSCEEEEEECC-T---TCHHHHHHHHHHTTTTTT
T ss_pred CCEEeEEEEEEEecccCCccccccccccc----ccccEEEEEEEECCCCEEEEEecC-C---CCHHHHHHHHHHHHHHHh
Confidence 48999999999999999999998875 3 347899999999999999999987 3 34444555666 488999
Q ss_pred ccCcccccccccccCchhhhhhhc-CCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTL-GIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
+|+++.++..++..+.. ... .....+..++|++||||||||+.||.+|+|||+||||.+ ++||+|
T Consensus 110 iG~d~~~~~~i~~~l~~----~~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~----------~~vp~~ 175 (428)
T 3bjs_A 110 IGMKATDCVGAWQRVHR----MQLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLGGSK----------RRIPAY 175 (428)
T ss_dssp TTSBTTCHHHHHHHHHH----HTTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCC----------CCEEEE
T ss_pred CCCCccCHHHHHHHHHH----hhhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCC----------Cceeee
Confidence 99998876555432211 101 111122367899999999999999999999999999974 579999
Q ss_pred Eeec-CCCCH-HHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcc
Q 041113 648 ALID-SNKSP-VEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIK 725 (983)
Q Consensus 648 ~~~~-~~~~~-~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~ 725 (983)
++.. ...++ +++.+.+++++++||++||+|+|. +++.|+++|++||+++|+++.|++|+|++||.++|+++++.|+
T Consensus 176 ~sg~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~--~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~ 253 (428)
T 3bjs_A 176 AGGIALGYQPKESLAEEAQEYIARGYKALKLRIGD--AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLA 253 (428)
T ss_dssp EESSCSCSCCHHHHHHHHHHHHHHTCSEEEEECCS--CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHH
T ss_pred eeccccCCChHHHHHHHHHHHHHCCCCEEEECCCC--CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 8611 13578 999999999999999999999996 7899999999999999999999999999999999999999999
Q ss_pred cCCCceeecCCC--ChHHHHHHHhhcC-CcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 726 DCDLQYIEEPVQ--NEEDIIKYCEESG-LPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 726 ~~~i~~iEeP~~--~~~~~~~l~~~~~-ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
++++.|||||++ +++.+++|+++++ +||++||++.+.. .+..+++.+ +|++++|++++||++++++++++|
T Consensus 254 ~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A 328 (428)
T 3bjs_A 254 EIQAGWLEEPFACNDFASYREVAKITPLVPIAAGENHYTRF-----EFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMA 328 (428)
T ss_dssp HTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHH-----HHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHH
T ss_pred hcCCCEEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHH-----HHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 999999999998 7889999999999 9999999999865 466677655 799999999999999999999999
Q ss_pred HHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc-hhcccccCCCCCce-eec----cCC
Q 041113 802 QRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-YQWLKEDVTTDPIS-ICH----NSC 875 (983)
Q Consensus 802 ~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~p~~-~~~----~P~ 875 (983)
+++|+++++| ++||++++++++|++++++|+. . .+ ++++. .. +.+ ++.+|+. +++ +|+
T Consensus 329 ~~~gi~~~~~-~~es~i~~~a~~hlaaa~~~~~--~---~E--------~~~~~~~~-~~~-~~~~~~~~~~~G~~~~p~ 392 (428)
T 3bjs_A 329 SAYRIPINAH-SSATGLNHAATIHFLAATENAG--Y---FE--------ACVSKFNP-FRD-MFGTSFEIGADGCVEPPD 392 (428)
T ss_dssp HHTTCCBCCB-CCSSHHHHHHHHHHHHHCTTBC--C---EE--------EECCSSCT-TTS-TTTC-CCCCTTSEECCCC
T ss_pred HHcCCeEEec-CCCcHHHHHHHHHHHHhCCCcc--c---ee--------cccccccc-HHH-hccCCCeeeeCCEEECCC
Confidence 9999998877 9999999999999999998631 1 11 11111 12 333 6667777 763 899
Q ss_pred CCeeeEEecchhhhhhhcccc
Q 041113 876 RGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 876 ~pGlGv~~d~a~~~~~~~~~~ 896 (983)
+||||+++| ++.++++.+.
T Consensus 393 ~PGlGv~~d--~~~l~~~~~~ 411 (428)
T 3bjs_A 393 APGLGIEVD--ESIFEKYPAV 411 (428)
T ss_dssp SSBTCCCCC--GGGTTTSCCC
T ss_pred CCCCCCeEC--HHHHHhhhcc
Confidence 999999999 7777776643
No 75
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=3.5e-55 Score=498.18 Aligned_cols=348 Identities=15% Similarity=0.184 Sum_probs=271.3
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.++ | .++.++|||+||+|++||||+.. ..++... ..++.+.|.|+|++
T Consensus 1 MkIt~ie~~~~~-----~-------------~~~~~~V~v~td~G~~G~GE~~~---~~~~~~~--~i~~~l~p~liG~d 57 (400)
T 4dxk_A 1 MKITKLETVRVA-----E-------------RTNLLWVLVHTDEGITGLGETFF---GAETVET--YVHEYIAPRVIGRD 57 (400)
T ss_dssp CCEEEEEEEEET-----T-------------STTEEEEEEEETTSCCEEEEEES---CHHHHHH--HHHHTHHHHHTTSC
T ss_pred CeEEEEEEEEEC-----C-------------CCCEEEEEEEECCCCEEEEcCCC---CccHHHH--HHHHHHHHHhCCCC
Confidence 799999987663 1 14678999999999999999542 2333221 22345899999999
Q ss_pred ccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC
Q 041113 573 ISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS 652 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~ 652 (983)
+.+++.++..+ . ...+....+...+|++|||||||||+||.+|+|||+||||.. +++|++|+++..
T Consensus 58 p~~~~~~~~~~-~----~~~~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~---------r~~v~~yas~~~ 123 (400)
T 4dxk_A 58 PLQIDLLAQDL-V----GYLGFRSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLGGFS---------RREIRTYNTCAG 123 (400)
T ss_dssp TTCHHHHHHHH-C----CSSSCSSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSCEEEEBC---
T ss_pred cchHHHHHHHH-H----HHhccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCCc---------cCceeEEEeccc
Confidence 98876665432 1 111212334567899999999999999999999999999986 578999976421
Q ss_pred ------------------CCCHHH--------HHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHH
Q 041113 653 ------------------NKSPVE--------VASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEV 694 (983)
Q Consensus 653 ------------------~~~~~~--------~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~v 694 (983)
..++++ ..+.+++++++||++||+|+|.+ .+++.|+++|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~av 203 (400)
T 4dxk_A 124 TEYIKKATGQQTANYGLSGGKDYDDLNGFLHRADELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKI 203 (400)
T ss_dssp -------------------------------CHHHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccHHHHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHH
Confidence 011122 23556678899999999999720 1367899999999
Q ss_pred HHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHh
Q 041113 695 RKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEK 772 (983)
Q Consensus 695 r~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~ 772 (983)
|+++|+++.|++|+|++|++++|+++++.|+++++.|||||++ +.+++++|++++++||++||++.+.. .+..
T Consensus 204 R~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~ 278 (400)
T 4dxk_A 204 RKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAVSPAPISASETLGSRW-----AFRD 278 (400)
T ss_dssp HHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHHCSSCEEECTTCCHHH-----HHHH
T ss_pred HHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHhCCCCEEecCCcCCHH-----HHHH
Confidence 9999999999999999999999999999999999999999998 78899999999999999999999875 3666
Q ss_pred hcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCcc
Q 041113 773 YAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQ 851 (983)
Q Consensus 773 ~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~ 851 (983)
+++.+ +|++|+|++++|||+++++++++|+++|++++.|+ +.++|++++++||++++||+. . .+. + .
T Consensus 279 ~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~-~~s~i~~aa~~hlaaa~p~~~--~---~e~-~----~- 346 (400)
T 4dxk_A 279 LLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHX-CTGPVVLCASTHLSLNAPNAL--V---QES-V----R- 346 (400)
T ss_dssp HHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC--CCCHHHHHHHHHHHHHCTTBC--C---EEC-C----T-
T ss_pred HHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC-CCChHHHHHHHHHHHhCCCce--e---EEe-c----c-
Confidence 66554 79999999999999999999999999999988665 459999999999999999641 1 010 0 0
Q ss_pred CccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccccc
Q 041113 852 GLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQINND 898 (983)
Q Consensus 852 g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~~ 898 (983)
.+...+.+|++.+|+.+++ +|++|||||++| ++.++++++...
T Consensus 347 --~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld--~~~l~~~~~~~~ 393 (400)
T 4dxk_A 347 --AFYKTWYRDLVTALPEVKNGMITVPPGAGLGMELH--PDIEKTFTVSRR 393 (400)
T ss_dssp --TC-CCTHHHHBSCCCEEETTEEECCSSSBTSCCBC--TTGGGTSCEEEE
T ss_pred --cccchhhHhhcCCCCeeeCCEEECCCCCCCCCcCC--HHHHhhccceee
Confidence 1122345577788888884 999999999999 778888776543
No 76
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=3.4e-54 Score=494.48 Aligned_cols=354 Identities=16% Similarity=0.161 Sum_probs=284.0
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.+..+ ..|..+..+.+. .....++|+|+||+|++||||+.+. + .+...++.++|.|+|++
T Consensus 5 ~~It~v~~~~v~~~-d~~~~~~~g~~~---~~~~~~iV~v~td~Gi~G~GE~~~~----~---~v~~~i~~l~p~LiG~d 73 (450)
T 3mzn_A 5 PKITKMNVVPVAGE-DGFLLNLSGGHE---PWFIRCVLVLEDESGNRGVGEIPSS----E---GILNGLEKCRSLVEGAR 73 (450)
T ss_dssp CBEEEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEEETTSCEEEEEEECC----H---HHHHHHHHTHHHHTTCB
T ss_pred CEEEEEEEEEeccc-CccccccccCCC---CcceEEEEEEEECCCCEEEEeCCCc----H---HHHHHHHHHHHHhCCCC
Confidence 69999999999887 555554444331 2367889999999999999998542 2 23445677899999999
Q ss_pred ccccccccccCchhhhhhh-cCCC-----CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC--CCCcccccccccccee
Q 041113 573 ISYFLPLLKGSFSSWIWST-LGIP-----ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY--PLTEIDEEISKRSTSI 644 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG--g~~~~~~~~~~~~~~i 644 (983)
+.+++.++..+... ++.. .+.. ......+|++|||+|||||+||.+|+|||+||| |+. +++|
T Consensus 74 p~~ie~i~~~~~~~-~~~~~~g~~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG~~G~~---------r~~v 143 (450)
T 3mzn_A 74 VNEVKQVLSRARGL-LAQGGPEERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLGQYGRQ---------RDEV 143 (450)
T ss_dssp GGGHHHHHHHHHHH-HGGGCCCCCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGSTTTCCC---------CSEE
T ss_pred hhhHHHHHHHHHHH-hhcccCCCcccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCc---------CceE
Confidence 99887776543322 1110 0100 012457899999999999999999999999999 555 5789
Q ss_pred EEEEeec----------------------------CCCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHH
Q 041113 645 KICALID----------------------------SNKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVR 695 (983)
Q Consensus 645 ~~~~~~~----------------------------~~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr 695 (983)
++|++.. ...++++++++++++++ +||++||+|+|. .++++|+++|++||
T Consensus 144 ~~y~~~~~~gd~~~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~-~~~~~Di~~v~avR 222 (450)
T 3mzn_A 144 EALGYLFLLGDPDKTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDFKLKGGV-LRGEEEADCIRALH 222 (450)
T ss_dssp EBCEEEECBCCGGGSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSS-SCHHHHHHHHHHHH
T ss_pred EeeeeeccccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEECCCC-CCHHHHHHHHHHHH
Confidence 9887531 12479999999999987 699999999997 37899999999999
Q ss_pred HHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--C----hHHHHHHHhhcCCcEEeCCCccCcCCChHHH
Q 041113 696 KKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--N----EEDIIKYCEESGLPVALDETIDKFQKDPLNM 769 (983)
Q Consensus 696 ~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~ 769 (983)
+++ |++.||||+|++||+++|+++++.|+++ +.|||||++ | .+++++|++++++|||+||++.+.. .
T Consensus 223 ea~-pd~~L~vDaN~~w~~~~A~~~~~~L~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~ 295 (450)
T 3mzn_A 223 EAF-PEARLALDPNGAWKLDEAVRVLEPIKHL-LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYK-----Q 295 (450)
T ss_dssp HHC-TTSEEEEECTTCBCHHHHHHHHGGGGGG-CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHH-----H
T ss_pred HhC-CCCeEEEECCCCCCHHHHHHHHHHhhhc-cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHH-----H
Confidence 997 8999999999999999999999999999 999999998 4 5789999999999999999988864 3
Q ss_pred HHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCC
Q 041113 770 LEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPP 848 (983)
Q Consensus 770 ~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~ 848 (983)
+..+++. .+|++++|+ ++|||+++++++++|+++|++++.+++.+++|++++++|+++++||. .
T Consensus 296 ~~~~i~~~a~di~~~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~~~~I~~aA~~hlaaa~p~~--~------------ 360 (450)
T 3mzn_A 296 LQYAVQLNSVDIPLADC-HFWTMQGAVAVGELCNEWGMTWGSHSNNHFDISLAMMTHVAAACPGE--I------------ 360 (450)
T ss_dssp HHHHHHHTCCSEEBCCH-HHHCHHHHHHHHHHHHHTTCCCBCCCCSCCHHHHHHHHHHHHTCCSC--C------------
T ss_pred HHHHHHcCCCCEEEecC-ccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc--c------------
Confidence 5555554 479999998 79999999999999999999988888889999999999999999852 0
Q ss_pred CccCccchhccc--ccCCCCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 849 VAQGLGTYQWLK--EDVTTDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 849 ~~~g~~~~~~~~--~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
..++.+.++. .+++.+|+.+++ +|++|||||++| ++.++++.
T Consensus 361 --~~~d~~~~~~~~~~l~~~~~~~~~G~i~vp~~PGLGveld--~~~l~~~~ 408 (450)
T 3mzn_A 361 --TAIDTHWIWQDGQRITREPFQIRDGKLTVPKTPGLGIELD--DDKLMEAH 408 (450)
T ss_dssp --CCBCCCHHHHTTCCSBSSCCCCBTTEEECCCSSBTSCCBC--HHHHHHHH
T ss_pred --hhhccccccccccccccCCCeEECCEEECCCCCcCCCccC--HHHHHHHH
Confidence 1123322223 477788888874 999999999999 66666644
No 77
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=2.4e-54 Score=496.33 Aligned_cols=356 Identities=15% Similarity=0.154 Sum_probs=282.8
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
.|||++|+++.+..+ ..+..+..+.+. ......+|+|+||+|++||||+.+. +. +...++.+.|.|+|+
T Consensus 8 ~~~It~v~v~~v~~~-d~~~~~~~g~h~---~~~~~~iV~v~td~Gi~G~GE~~~~----~~---v~~~i~~l~p~LiG~ 76 (455)
T 3pfr_A 8 VPVITDMKVIPVAGH-DSMLMNVGGAHS---PYFTRNIVILTDNSGHTGVGEAPGG----AT---IENALTEAIPHVVGR 76 (455)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECC---SEEEEEEEEEEETTSCEEEEEEECS----HH---HHHHHHHHGGGTTTC
T ss_pred CCEEEEEEEEEeccC-CccccccccCCC---CcceEEEEEEEECCCCEEEEeCCCc----HH---HHHHHHHHHHHhcCC
Confidence 479999999999998 666665555541 2367789999999999999998542 22 344567789999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCc-----chhhHHHHHHHHHHHHHHHHcCCChhhhcC-CCCccccccccccceeE
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACE-----IFPSVRCGLEMAILNAIAVKHGSSFLNILY-PLTEIDEEISKRSTSIK 645 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~a~~aid~AlwDl~gk~~g~pv~~lLG-g~~~~~~~~~~~~~~i~ 645 (983)
++.+++.++..++....+...+....+ ...+|++|||+|||||+||.+|+|||+||| |+. +++|+
T Consensus 77 dp~~ie~i~~~~~~~~~~~~~~~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG~~---------r~~v~ 147 (455)
T 3pfr_A 77 PISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQ---------RDEVT 147 (455)
T ss_dssp BGGGHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGSTTSCC---------CSEEE
T ss_pred ChhHHHHHHHHHHhhccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCc---------CCeEE
Confidence 999887776543220000000000111 127899999999999999999999999999 665 57899
Q ss_pred EEEeecC----------------------------CCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHHHHH
Q 041113 646 ICALIDS----------------------------NKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQEVRK 696 (983)
Q Consensus 646 ~~~~~~~----------------------------~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~vr~ 696 (983)
+|++... ..++++++++++++++ +||++||+|+|. .++++|+++|++||+
T Consensus 148 ~y~~~~~~gd~~~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~-~~~~~Di~~v~avRe 226 (455)
T 3pfr_A 148 VLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGV-FEGSKEIDTVIELKK 226 (455)
T ss_dssp BCEEECCBCCGGGSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEEEECSS-SCHHHHHHHHHHHHH
T ss_pred EeeeeccccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEEcCCC-CCHHHHHHHHHHHHH
Confidence 9875310 2579999999999987 699999999997 378999999999999
Q ss_pred HcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--C----hHHHHHHHhhcCCcEEeCCCccCcCCChHHHH
Q 041113 697 KVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--N----EEDIIKYCEESGLPVALDETIDKFQKDPLNML 770 (983)
Q Consensus 697 ~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~ 770 (983)
++ |++.||||+|++||+++|+++++.|+++ +.|||||++ | ++++++|++++++|||+||++.+.. .+
T Consensus 227 a~-pd~~L~vDaN~~w~~~~A~~~~~~L~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~ 299 (455)
T 3pfr_A 227 HF-PDARITLDPNGCWSLDEAIQLCKGLNDV-LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWR-----EM 299 (455)
T ss_dssp HC-TTCCEEEECTTBSCHHHHHHHHTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHH-----HH
T ss_pred hC-CCCeEeecCCCCCCHHHHHHHHHhhccc-ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCCcCCHH-----HH
Confidence 97 8999999999999999999999999999 999999998 4 5789999999999999999988764 35
Q ss_pred HhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCC
Q 041113 771 EKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPV 849 (983)
Q Consensus 771 ~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~ 849 (983)
..+++. .+|++|+|+ ++|||+++++++++|+++|++++.+++.+++|++++++|+++++||. .
T Consensus 300 ~~~i~~~a~di~~~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~~~~i~~aa~~hlaaa~p~~--~------------- 363 (455)
T 3pfr_A 300 CHAIMLQSVDIPLADP-HFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGN--P------------- 363 (455)
T ss_dssp HHHHHHTCCSEEBCCH-HHHCHHHHHHHHHHHHHTTCCCBCCCCSCCHHHHHHHHHHHHHCCSC--C-------------
T ss_pred HHHHHcCCCCEEEecC-CcCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc--c-------------
Confidence 555554 479999998 79999999999999999999988887888999999999999999863 0
Q ss_pred ccCccchhccc---ccCCCCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 850 AQGLGTYQWLK---EDVTTDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 850 ~~g~~~~~~~~---~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
..++.+..+. .+++.+|+.+++ +|++|||||++| ++.++++.
T Consensus 364 -~~~d~~~~~~~~~~~l~~~p~~~~dG~i~vp~~PGLGveld--~~~l~~~~ 412 (455)
T 3pfr_A 364 -TALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELN--MDNVLKAH 412 (455)
T ss_dssp -CCBCCCGGGTTTTCCSBSSCCCEETTEEECCSCSBTCCCBC--HHHHHHHH
T ss_pred -hhhccccccccchhhccCCCCeEECCEEeCCCCCcCCcccC--HHHHHHHH
Confidence 0122211111 467788888874 999999999999 77766644
No 78
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=100.00 E-value=7.1e-54 Score=516.73 Aligned_cols=424 Identities=24% Similarity=0.351 Sum_probs=326.9
Q ss_pred HHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHHH
Q 041113 2 ILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVLE 81 (983)
Q Consensus 2 i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (983)
+++.+++||++|.++|||||||+||+|+++.+...... ...|. ..+...... ..+.++++.++++++
T Consensus 172 ~~~~i~~A~~~A~~~~~GPV~l~iP~d~~~~~~~~~~~------~~~~~--~~~~~~~~~-----~~~~~~~~~i~~~~~ 238 (604)
T 2x7j_A 172 IRTLASRAAGEAQKRPMGPVHVNVPLREPLMPDLSDEP------FGRMR--TGRHVSVKT-----GTQSVDRESLSDVAE 238 (604)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEEEECCSCCCCCTTSCT------TCCSS--SSCSSEEEC-----CEEECCTGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEcccCccCCCcccccc------ccccc--ccccccccc-----cCccCChhhHHHHHH
Confidence 78899999999999999999999999986643311000 00000 000010000 012345578999999
Q ss_pred HHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccC-ccccccCC
Q 041113 82 LVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLS-ESVKDWIQ 160 (983)
Q Consensus 82 ~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~-~~~~~~~~ 160 (983)
+|++||||+|++|+++..++.+++.+|||++|+||++|++++ ++.+|++||++ +|.++..... .....++
T Consensus 239 ~l~~A~rPvIl~G~g~~~~a~~~l~~lae~~~~PV~~t~~~~------~~~~~~~~p~~--~g~~~~~~~~~~~~~~~~- 309 (604)
T 2x7j_A 239 MLAEAEKGMIVCGELHSDADKENIIALSKALQYPILADPLSN------LRNGVHDKSTV--IDAYDSFLKDDELKRKLR- 309 (604)
T ss_dssp HHHHCSSEEEEECCCCCHHHHHHHHHHHHHHTCCEEECGGGT------TTBSSSCCTTE--ECCHHHHTTSHHHHHHHC-
T ss_pred HHhhcCCeEEEECCCCcHHHHHHHHHHHHhcCceEEEccccc------ccccCCCCcce--echHHHHhcCchhhhhcC-
Confidence 999999999999999865556899999999999999999854 24558899995 6877744333 3333454
Q ss_pred CCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccC-CCCChhHHHHHHHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQV-PHRSSKWCSFLRALD 239 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~-~~~~~~w~~~~~~~~ 239 (983)
+|+||+||+++.+..+..|.....+.++||||+|+.++++++++++.+++|++.++++|.+.+. ......|.+++...+
T Consensus 310 ~Dlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~w~~~~~~~~ 389 (604)
T 2x7j_A 310 PDVVIRFGPMPVSKPVFLWLKDDPTIQQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGLTAATRSSEWLEKWQFVN 389 (604)
T ss_dssp CSEEEEESSCCSCHHHHHHHHHCTTSEEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTSCSSCCCCHHHHHHHHHH
T ss_pred CCEEEEECCcCccHHHHHHHhhCCCCeEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Confidence 8999999999988887777765445579999999999999999999999999999999998774 333457877665554
Q ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEeec
Q 041113 240 MMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAGN 319 (983)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 319 (983)
......... .....++++..+++.|++.+|++++|++|+|+++++...+... ..+|++|+ .+.+
T Consensus 390 ~~~~~~~~~-~~~~~~~~~~~~~~~L~~~lp~d~iv~~d~g~~~~~~~~~~~~----~~~~~~~~-----------~~~G 453 (604)
T 2x7j_A 390 GRFREHLQT-ISSEDVSFEGNLYRILQHLVPENSSLFVGNSMPIRDVDTFFEK----QDRPFRIY-----------SNRG 453 (604)
T ss_dssp HHHHHHHHT-SCCCCTTSHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCC----BSCCCEEE-----------CCTT
T ss_pred HHHHHHHHh-hcccCCCCHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHhccc----CCCCceEE-----------eCCC
Confidence 433222211 1123579999999999999999999999999976665544321 01133333 2455
Q ss_pred CCCCCccchHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccc
Q 041113 320 RGASGIDGLLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILD 399 (983)
Q Consensus 320 ~G~mG~~g~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~ 399 (983)
+|+||+ ++|+|+|+++|.+++||+++|||+|+|++|||+|+++ +++|++|||+||++|+|++.+++... ...++
T Consensus 454 ~~~ig~--~l~~AiGaala~~~~vv~i~GDGsf~~~~~eL~ta~~--~~lp~~ivv~NN~~~~i~~~~~~~q~--~~~~~ 527 (604)
T 2x7j_A 454 ANGIDG--VVSSAMGVCEGTKAPVTLVIGDLSFYHDLNGLLAAKK--LGIPLTVILVNNDGGGIFSFLPQASE--KTHFE 527 (604)
T ss_dssp TCCSSS--HHHHHHHHHHHHTSCEEEEEEHHHHHHTGGGGHHHHH--HCCCEEEEEEECSSCGGGGGSGGGSC--HHHHH
T ss_pred cCCcCc--HHHHHHHHHhcCCCcEEEEEccHHHHhHHHHHHHhhh--cCCCeEEEEEeCCCCcccccCCCCcc--chhhH
Confidence 677888 9999999999988999999999999999999999999 99999999999999999877543211 12334
Q ss_pred cccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHHHHHHHHHHHHH
Q 041113 400 QYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATFHSMLRKFARQS 469 (983)
Q Consensus 400 ~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~~~~~~~~~~~~ 469 (983)
+++.+.+++||.++|++||+++++|++.+||+++|+++++.++|+||||.++++++...++++++.+.+.
T Consensus 528 ~~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~liev~~~~~~~~~~~~~~~~~~~~~ 597 (604)
T 2x7j_A 528 DLFGTPTGLDFKHAAALYGGTYSCPASWDEFKTAYAPQADKPGLHLIEIKTDRQSRVQLHRDMLNEAVRE 597 (604)
T ss_dssp HHTTCCCCCCTHHHHHHTTCEEECCSSHHHHHHHCCCCCSSCCEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCHHHHHHHcCCeEEecCCHHHHHHHHHHHHhCCCCEEEEEECCccccHHHHHHHHHHHHHH
Confidence 4555567899999999999999999999999999999998899999999999999999999998877654
No 79
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=2.6e-54 Score=488.95 Aligned_cols=352 Identities=18% Similarity=0.216 Sum_probs=288.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l~g~ 571 (983)
|||++|+++.+++|++.||.++.+.. ...++.++|+|+|++|++||||+.+.+.+. ..+...+. .++|.|+|+
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~---~~~~~~~~V~v~td~G~~G~Ge~~~~g~~~---~~~~~~i~~~l~~~l~G~ 75 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGA---MMDFELITVRIEDSDGATGLGYTYTVNHGG---AAVATMVDKDLRGCLLGA 75 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCC---EEEEEEEEEEEEETTSCEEEEEEEEESSSH---HHHHHHHHHTTHHHHTTS
T ss_pred CceEEEEEEEEeccCCCCCccccccc---cCcceEEEEEEEECCCCEEEEeecCCCCch---HHHHHHHHHHHHHHhcCC
Confidence 79999999999999999998887642 034889999999999999999998753222 23344443 588999999
Q ss_pred cccccccccccCchhhhhhh-cCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 572 KISYFLPLLKGSFSSWIWST-LGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
++.++..++..+ ... .+....+..++|++|||+||||++||.+|+|||+||||.+ ++||+|++.
T Consensus 76 d~~~~~~~~~~l-----~~~~~~~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~----------~~v~~y~~~ 140 (371)
T 2ovl_A 76 DAEQIEKIWQSM-----WWRLHYAGRGGHATSAISAVDIALWDLKGIRARTPLWKLFGGYD----------PVVPVYAGG 140 (371)
T ss_dssp CTTCHHHHHHHH-----HHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCC----------SEEEEEEEC
T ss_pred CcccHHHHHHHH-----HHHhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CCeeEEEeC
Confidence 988765554322 111 1112234568899999999999999999999999999975 679999874
Q ss_pred cC-CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 651 DS-NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 651 ~~-~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
+. ..+++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++||.++|+++++.|+++++
T Consensus 141 ~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 219 (371)
T 2ovl_A 141 IDLELPVADLKTQADRFLAGGFRAIKMKVGR-PDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDL 219 (371)
T ss_dssp CBTTSCHHHHHHHHHHHHHTTCSCEEEECCC-SSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CCcCCCHHHHHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 32 2379999999999999999999999997 378999999999999999999999999999999999999999999999
Q ss_pred ceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCC
Q 041113 730 QYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGK 806 (983)
Q Consensus 730 ~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi 806 (983)
.|||||++ +++.+++|++++++||++||++.+..+ +..+++ ..+|++++|++++||++++++++++|+++|+
T Consensus 220 ~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~-----~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi 294 (371)
T 2ovl_A 220 HWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYD-----FHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNM 294 (371)
T ss_dssp SEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHH-----HHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTC
T ss_pred CEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHH-----HHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCC
Confidence 99999998 788999999999999999999998653 555554 4579999999999999999999999999999
Q ss_pred cEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEE
Q 041113 807 MAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEAS 882 (983)
Q Consensus 807 ~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~ 882 (983)
++++|++.+ +++|++++++|+. . . ++ ..++..|++.+|+.+++ +|++||||++
T Consensus 295 ~~~~h~~~~------a~~hlaaa~~~~~--~---~--e~----------~~~~~~~~~~~~~~~~~G~~~~p~~PGlGv~ 351 (371)
T 2ovl_A 295 LLTSHGVHD------LTVHALASVPHRT--Y---M--EA----------HGFGLHAYMAEPMAVTDGCVSAPDRPGHGVV 351 (371)
T ss_dssp CEEECSCHH------HHHHHHTSCTTEE--E---E--EC----------C---CGGGBSSCCCCBTTEEECCCSSBTCCC
T ss_pred eEccccHHH------HHHHHHhhCCCCc--c---c--cc----------ChHHHHHhccCCCeeeCCEEECCCCCCCCCc
Confidence 999888743 8999999998641 1 0 01 12345677777888774 8999999999
Q ss_pred ecchhhhhhhcccc
Q 041113 883 VAKATHILQNLQIN 896 (983)
Q Consensus 883 ~d~a~~~~~~~~~~ 896 (983)
+| ++.++++.+.
T Consensus 352 ~d--~~~l~~~~~~ 363 (371)
T 2ovl_A 352 LD--FERLGRLAVG 363 (371)
T ss_dssp BC--HHHHHTTBC-
T ss_pred cC--HHHHHhhhcc
Confidence 99 8888887654
No 80
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=5e-54 Score=482.03 Aligned_cols=329 Identities=22% Similarity=0.266 Sum_probs=284.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
|||++|+++.+++|++.||.++.+.. +.++.++|+|+|++|++||||+.+.+ +++++...+...++.+.|.|+|+
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~i~~l~~~l~g~ 77 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVS----SESRNVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREMITGI 77 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEEETTSCEEEEEECCCHHHHCCCHHHHHHTHHHHHHHHTTC
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeE----eeceEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999999887654 45899999999999999999998764 34566666666777799999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
++.+++.++. .+. .....++|++|||+||||+.||.+|+|||+|||| . +++||+|++++
T Consensus 78 d~~~~~~~~~---------~l~--~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg-~---------~~~v~~~~~~~ 136 (345)
T 2zad_A 78 DVRNYARIFE---------ITD--RLFGFPSLKAAVQFATLDALSQELGTQVCYLLGG-K---------RDEIETDKTVG 136 (345)
T ss_dssp BGGGHHHHHH---------HHT--TCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHTTC-C---------CSEEEBCEEEC
T ss_pred ChhhHHHHHH---------HHH--HhccchHHHHHHHHHHHHHHHHHcCCcHHHHhCC-C---------CCceeeeEEec
Confidence 9887654442 110 1123578999999999999999999999999999 4 47899998874
Q ss_pred CCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCc-
Q 041113 652 SNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQ- 730 (983)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~- 730 (983)
..+++++.+.+++++++||++||+|+|. ++++|+++|++||++ |+++.|++|+|++|+.++|+++++.|+++++.
T Consensus 137 -~~~~~~~~~~a~~~~~~Gf~~iKik~g~--~~~~d~~~v~avr~~-g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 212 (345)
T 2zad_A 137 -IDTVENRVKEAKKIFEEGFRVIKIKVGE--NLKEDIEAVEEIAKV-TRGAKYIVDANMGYTQKEAVEFARAVYQKGIDI 212 (345)
T ss_dssp -SCCHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHHHHHHHHHH-STTCEEEEECTTCSCHHHHHHHHHHHHHTTCCC
T ss_pred -CCCHHHHHHHHHHHHHcCcCEEEEeecC--CHHHHHHHHHHHHhh-CCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCe
Confidence 4689999999999999999999999996 789999999999999 99999999999999999999999999999999
Q ss_pred -eeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCC
Q 041113 731 -YIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGK 806 (983)
Q Consensus 731 -~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi 806 (983)
|||||++ +++.+++|++++++||++||++.+..+ +..+++. .+|++++|+++ ||++++++++++|+++|+
T Consensus 213 ~~iE~P~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~-----~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~ 286 (345)
T 2zad_A 213 AVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFD-----VMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGL 286 (345)
T ss_dssp SEEECCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHH-----HHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTC
T ss_pred eeeeCCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHH-----HHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCC
Confidence 9999998 788899999999999999999998653 5555544 47999999999 999999999999999999
Q ss_pred cEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee
Q 041113 807 MAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC 871 (983)
Q Consensus 807 ~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~ 871 (983)
++++||++||+|++++++|++++++|+. .+.+++..++.+|++.+|+.++
T Consensus 287 ~~~~~~~~es~i~~aa~~hlaa~~~~~~---------------~~e~~~~~~~~~d~~~~~~~~~ 336 (345)
T 2zad_A 287 KLMIGCMGESSLGINQSVHFALGTGAFE---------------FHDLDSHLMLKEEVFRGKFIQD 336 (345)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHCCCS---------------EECCCGGGGBSSCCCCCSSEEE
T ss_pred eEEEecCcccHHHHHHHHHHHHcCCCCc---------------eeecCCchhhhhccccCCcEEE
Confidence 9999999999999999999999998631 1224455567788888888776
No 81
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=6.2e-54 Score=488.40 Aligned_cols=352 Identities=15% Similarity=0.145 Sum_probs=287.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAK 572 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~ 572 (983)
|||++|+++.+. |+..|+.++. .++.++|+|+|++|++||||+.+.++..+ .+...++.++|.|+|++
T Consensus 11 MkI~~i~~~~~~-p~~~~~~~~~--------~~~~~~V~v~td~G~~G~GE~~~~~~~~~---~~~~~i~~l~p~l~G~d 78 (391)
T 2qgy_A 11 GKLSRLKIWITD-NHLSDDQWSN--------TKKFIIIKITTEDGIEGWGEAFSINFREK---GIAIIIKELFREISNIP 78 (391)
T ss_dssp CCEEEEEEEEEC-CCBCGGGCSB--------CCCCEEEEEEETTCCEEEEEECCCTTTHH---HHHHHHHHHHHHHTTCT
T ss_pred CEEEEEEEEEec-CccccccccC--------CCcEEEEEEEECCCCEEEecccCCCCChH---HHHHHHHHHHHHhcCCC
Confidence 899999999994 6555544332 25679999999999999999987643333 34456667999999999
Q ss_pred ccccccccccCchhhhhh-hcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE--e
Q 041113 573 ISYFLPLLKGSFSSWIWS-TLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA--L 649 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~--~ 649 (983)
+.++..++..+ .. .......+. ++|++|||+||||+.||.+|+|||+||||.. +++||+|+ +
T Consensus 79 ~~~~~~i~~~l-----~~~~~~~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~---------~~~vp~~~~g~ 143 (391)
T 2qgy_A 79 NLSIKSFYNKI-----SLLSDGHRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLTKSP---------KPNVPIYATCW 143 (391)
T ss_dssp TCCHHHHHHHH-----HHHHTTCCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHCSSC---------CSEEEEEEECC
T ss_pred hhHHHHHHHHH-----HhhhhhccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcCCCc---------CCCcceEEecc
Confidence 88765554321 11 111111123 7899999999999999999999999999975 47899997 4
Q ss_pred ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCC-hHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 IDSNKSPVEVASIATTLVEEGFTAIKLKVARRAD-PIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~-~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+....+++++.+.+++++++||++||+|+|. + ++.|+++|++||+++|+++.|++|+|++|++++|+++++.|++++
T Consensus 144 ~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~--~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 221 (391)
T 2qgy_A 144 SDLKKDTNDYLRQIEKFYGKKYGGIKIYPML--DSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFN 221 (391)
T ss_dssp CSSCCCHHHHHHHHHHHHHTTCSCEEECCCC--SSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEccCC--ChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcC
Confidence 4224689999999999999999999999986 5 789999999999999999999999999999999999999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++.+++|++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|+++|
T Consensus 222 i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 296 (391)
T 2qgy_A 222 PYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLV-----HFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNG 296 (391)
T ss_dssp CSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHH-----HHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTT
T ss_pred CCeEeCCCChhhHHHHHHHHhhCCCCEEEcCCcCCHH-----HHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCC
Confidence 999999998 78899999999999999999999865 36666654 47999999999999999999999999999
Q ss_pred CcEEeCCCCch-HHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 806 KMAVVSAAFES-GLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 806 i~~~~~~~~es-~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
+++++|++ ++ +|++++++|++++++|+.. ..+..+...| ..|++.+|+.+++ +|++||||
T Consensus 297 i~~~~~~~-~~~~i~~aa~~hlaaa~~~~~~-------------~e~~~~~~~~-~~d~~~~~~~~~~G~~~~p~~PGlG 361 (391)
T 2qgy_A 297 IFISPHCW-NSMSVSASAMLHVCSSIPNSEK-------------AEIFPDYINF-SKKFCELPFDIIDNKAHINKSAGLG 361 (391)
T ss_dssp CEECCBCC-SCTTHHHHHHHHHHHHCTTBCC-------------EEECGGGHHH-HHTTBCCSEEEETTEEEECCSSBTC
T ss_pred CEEeccCC-CCcHHHHHHHHHHHHhCCCCce-------------EeecCccchh-hHHHhcCCceeeCCEEECCCCCcCC
Confidence 99988886 88 9999999999999986410 0111111223 3788888888874 89999999
Q ss_pred EEecchhhhhhhccc
Q 041113 881 ASVAKATHILQNLQI 895 (983)
Q Consensus 881 v~~d~a~~~~~~~~~ 895 (983)
+++| ++.++++.+
T Consensus 362 v~~d--~~~l~~~~~ 374 (391)
T 2qgy_A 362 IVIH--EDILSELSI 374 (391)
T ss_dssp CCBC--HHHHHHTEE
T ss_pred ccCC--HHHHHhccC
Confidence 9999 888777664
No 82
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=7.6e-54 Score=487.64 Aligned_cols=357 Identities=17% Similarity=0.152 Sum_probs=296.0
Q ss_pred eeEeEEEEEEEEeeCCC--------------------CCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcc
Q 041113 493 CKICRMEYSLYRIQLCA--------------------PPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKE 552 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~--------------------p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~ 552 (983)
|||++|+++.+++|++. ||.++.+.. ..+ .++|+|+|++|++||||+.+.. .+
T Consensus 3 mkI~~i~~~~~~~pl~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~----~~~-~~~V~v~td~G~~G~GE~~~~~--~~ 75 (388)
T 2nql_A 3 SPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPT----FDR-SVLVRMTTEAGTVGWGETYGIV--AP 75 (388)
T ss_dssp CCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEES----SEE-EEEEEEEETTCCEEEEEEECSS--CH
T ss_pred ceEeEEEEEEEeccCcccccccccccccccccccccCCccccccCc----cce-EEEEEEEECCCCEEEEEecCCC--Cc
Confidence 79999999999999999 999887654 347 9999999999999999998763 33
Q ss_pred cHHHHHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCC
Q 041113 553 NLLDAEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLT 631 (983)
Q Consensus 553 ~~~~~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~ 631 (983)
+ .+...++ .++|.|+|+++.++..++..++.. ........+..++|++|||+||||++||.+|+|||+||||.+
T Consensus 76 ~--~~~~~i~~~l~~~l~G~d~~~~~~i~~~l~~~---~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~ 150 (388)
T 2nql_A 76 G--AVAALINDLLAGFVIGRDASDPSAVYDDLYDM---MRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLGGGV 150 (388)
T ss_dssp H--HHHHHHHHTHHHHHTTCCSSSHHHHHHHHHHH---HGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCC
T ss_pred H--HHHHHHHHHHHHHhcCCCcccHHHHHHHHHhh---cccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC
Confidence 2 3455666 489999999988765554322110 111111123367899999999999999999999999999974
Q ss_pred ccccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCC
Q 041113 632 EIDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRN 711 (983)
Q Consensus 632 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~ 711 (983)
++||+|++++...+++++.+.+++++++||++||+|+|. .+++. +++|++||+++|+++.|++|+|++
T Consensus 151 ----------~~vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~~-~e~v~avr~a~g~d~~l~vDan~~ 218 (388)
T 2nql_A 151 ----------DSFPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV-ADDGP-AAEIANLRQVLGPQAKIAADMHWN 218 (388)
T ss_dssp ----------SEEEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG-CTTCH-HHHHHHHHHHHCTTSEEEEECCSC
T ss_pred ----------CceEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC-CChHH-HHHHHHHHHHhCCCCEEEEECCCC
Confidence 679999876434689999999999999999999999996 25778 999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCc
Q 041113 712 WTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVI 788 (983)
Q Consensus 712 ~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~ 788 (983)
|+.++|+++++.|+++++.|||||++ +++.++++++++++||++||++.+.. .+..+++.+ +|++++|+++
T Consensus 219 ~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~- 292 (388)
T 2nql_A 219 QTPERALELIAEMQPFDPWFAEAPVWTEDIAGLEKVSKNTDVPIAVGEEWRTHW-----DMRARIERCRIAIVQPEMGH- 292 (388)
T ss_dssp SCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTSCCSCEEECTTCCSHH-----HHHHHHTTSCCSEECCCHHH-
T ss_pred CCHHHHHHHHHHHhhcCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHH-----HHHHHHHcCCCCEEEecCCC-
Confidence 99999999999999999999999998 78899999999999999999999865 366666654 7999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCc
Q 041113 789 GGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPI 868 (983)
Q Consensus 789 GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~ 868 (983)
||++++++++++|+++|+++++|+++||+|++++++|++++++|. ++ +..++++. + +.+|++.+|+
T Consensus 293 GGit~~~~i~~~A~~~g~~~~~h~~~es~i~~aa~~hlaa~~~~~---~~---------e~~~d~~~-~-~~~d~~~~~~ 358 (388)
T 2nql_A 293 KGITNFIRIGALAAEHGIDVIPHATVGAGIFLAASLQASSTLSML---KG---------HEFQHSIF-E-PNRRLLDGDM 358 (388)
T ss_dssp HCHHHHHHHHHHHHHHTCEECCCCCSSCSHHHHHHHHHHTTCTTB---CC---------EEECHHHH-T-GGGGGEESCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEeecCCCcHHHHHHHHHHHHhCCch---hh---------hccccccc-h-HHHHhccCCC
Confidence 999999999999999999999988999999999999999999852 10 00111112 2 4677777888
Q ss_pred eeec----cCCCCeeeEEecchhhhhhhccc
Q 041113 869 SICH----NSCRGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 869 ~~~~----~P~~pGlGv~~d~a~~~~~~~~~ 895 (983)
.+++ +|++||||+++| ++.++++..
T Consensus 359 ~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~ 387 (388)
T 2nql_A 359 DCREGRYHLPSGPGLGVRPS--EAALGLIER 387 (388)
T ss_dssp EEETTEEECCCSSBTSCEEC--HHHHHHCEE
T ss_pred cccCCEEECCCCCCCCceEC--HHHHHhhhc
Confidence 8874 899999999999 788777653
No 83
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=9.6e-54 Score=482.81 Aligned_cols=349 Identities=15% Similarity=0.097 Sum_probs=288.7
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l 568 (983)
|++|||++|+++.+++|++.||.++.+.+ +.++.++|+|+|++|++||||+.+.+ .++. .+...++ .+.|.|
T Consensus 1 ~~~mkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~v~v~td~G~~G~Ge~~~~~--~~~~-~~~~~i~~~l~~~l 73 (359)
T 1mdl_A 1 MSEVLITGLRTRAVNVPLAYPVHTAVGTV----GTAPLVLIDLATSAGVVGHSYLFAYT--PVAL-KSLKQLLDDMAAMI 73 (359)
T ss_dssp --CCBEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEEECSS--GGGH-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEEEEcCCCCCcccccccc----ccccEEEEEEEeCCCCEEEEEeecCC--CchH-HHHHHHHHHHHHHH
Confidence 44589999999999999999999887653 34889999999999999999998764 3333 4455565 588999
Q ss_pred ccCcccccccccccCchhhhhhhc-CCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTL-GIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
+|+++.++..+ ..+ +... .....+..++|++|||+||||+.||.+|+|||+||||.+ ++||+|
T Consensus 74 ~g~d~~~~~~~-~~l-----~~~~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llGg~~----------~~vp~~ 137 (359)
T 1mdl_A 74 VNEPLAPVSLE-AML-----AKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANA----------RPVQAY 137 (359)
T ss_dssp TTSBSCHHHHH-HHH-----HHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCCC----------CCEEEE
T ss_pred CCCCccchHHH-HHH-----HHHHHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhCCCC----------CCeeee
Confidence 99998775544 211 1111 111123467899999999999999999999999999974 579999
Q ss_pred EeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 648 ALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
+++ +..+++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++|+.++|+++++.|+++
T Consensus 138 ~~~-g~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 215 (359)
T 1mdl_A 138 DSH-SLDGVKLATERAVTAAELGFRAVKTRIGY-PALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQE 215 (359)
T ss_dssp EEC-CSCHHHHHHHHHHHHHHTTCSEEEEECCC-SSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred eec-CCCCHHHHHHHHHHHHHcCCCEEEEecCC-CCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 874 34688999999999999999999999996 3789999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++.++++++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|+++
T Consensus 216 ~i~~iE~P~~~~~~~~~~~l~~~~~iPI~~de~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~ 290 (359)
T 1mdl_A 216 GVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPE-----EMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQF 290 (359)
T ss_dssp TCSCEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHH-----HHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHT
T ss_pred CCCeEECCCChhhHHHHHHHHHhCCCCEEeCCCCCCHH-----HHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHc
Confidence 9999999998 78899999999999999999999865 35555544 5799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|+++++|+ +++ +++|++++++|+. . +++. + +..|++.+|+.+++ +|++||||
T Consensus 291 g~~~~~~~-~~~-----a~~~laaa~~~~~--~-------------~e~~--~-~~~d~~~~~~~~~~G~~~~p~~pGlG 346 (359)
T 1mdl_A 291 GIPMSSHL-FQE-----ISAHLLAATPTAH--W-------------LERL--D-LAGSVIEPTLTFEGGNAVIPDLPGVG 346 (359)
T ss_dssp TCCBCCBS-CHH-----HHHHHHHTCTTBC--C-------------EEEC--C-SSTTTBCCCSEEETTEEECCSSSBTC
T ss_pred CCeEeecc-HHH-----HHHHHHHhCCCCc--c-------------cccC--c-hhhhhccCCceeECCEEECCCCCCCC
Confidence 99988775 443 8999999998631 0 1111 2 36677778888874 89999999
Q ss_pred EEecchhhhhhhcc
Q 041113 881 ASVAKATHILQNLQ 894 (983)
Q Consensus 881 v~~d~a~~~~~~~~ 894 (983)
+++| ++.++++.
T Consensus 347 v~~d--~~~l~~~~ 358 (359)
T 1mdl_A 347 IIWR--EKEIGKYL 358 (359)
T ss_dssp CCBC--HHHHHHHB
T ss_pred ccCC--HHHHHhcc
Confidence 9999 77777664
No 84
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=3.1e-54 Score=486.61 Aligned_cols=346 Identities=18% Similarity=0.205 Sum_probs=269.5
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHH-HHHHhHhcc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQL-RFLLHFMTG 570 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l-~~~~~~l~g 570 (983)
.|||++|+++.. +..++|||+||+|++||||+.+.. .+. +...+ +.+.|.|+|
T Consensus 22 ~mkIt~v~~~~~---------------------~~~~~V~v~Td~G~~G~GE~~~~~--~~~---~~~~i~~~l~p~LiG 75 (388)
T 3tcs_A 22 SMKLKAIETFTN---------------------DAVGFVRVTTQDGAQGWGQVSTYH--ADI---TCTVLHRQVAPWMLG 75 (388)
T ss_dssp -CBEEEEEEEEC---------------------SSCEEEEEEETTSCEEEEECCSSS--HHH---HHHHHHHHTHHHHTT
T ss_pred ccEEEEEEEEEe---------------------CCeEEEEEEECCCCEEEEeccCCc--cHH---HHHHHHHHHHHHhCC
Confidence 379999996542 124699999999999999987532 222 22233 468999999
Q ss_pred CcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEee
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALI 650 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~ 650 (983)
+++.+++.++..+.. ..... ......+|++|||+|||||+||.+|+|||+||||.+ ++|++|++.
T Consensus 76 ~d~~~~e~l~~~~~~----~~~~~-~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGg~~----------~~v~~y~s~ 140 (388)
T 3tcs_A 76 QDITDLDDLLDIVTE----REHKF-PGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLGGTP----------GLIRAYASS 140 (388)
T ss_dssp SBCTTHHHHHHHHHH----HTTTC-CBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCC----------EEEEEEEEC
T ss_pred CCcccHHHHHHHHHH----hhhcc-CCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhCCCC----------CceEEEEec
Confidence 999987776643221 11111 122345799999999999999999999999999975 579999875
Q ss_pred cC-CCCHHHHHHHHHHh-hhcCCCEEEEeccCCC------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHh
Q 041113 651 DS-NKSPVEVASIATTL-VEEGFTAIKLKVARRA------DPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGF 722 (983)
Q Consensus 651 ~~-~~~~~~~~~~~~~~-~~~G~~~~KiKig~~~------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~ 722 (983)
.. ..++++..+++.+. +++||++||+|+|... .+++|++++++||+++|+++.|++|+|++|++++|+++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~ 220 (388)
T 3tcs_A 141 MKRDITPRDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGH 220 (388)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHH
T ss_pred CcCCCChHHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHH
Confidence 32 24677777776665 4789999999999631 1456899999999999999999999999999999999999
Q ss_pred hcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHH
Q 041113 723 LIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIAR 799 (983)
Q Consensus 723 ~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~ 799 (983)
.|+++++.|||||++ +++++++|++++++||++||++++..+ +..+++ ..+|++|+|++++|||++++++++
T Consensus 221 ~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~a~d~v~~d~~~~GGit~a~kia~ 295 (388)
T 3tcs_A 221 MLQDHGFCHFEEPCPYWELAQTKQVTDALDIDVTGGEQDCDLPT-----WQRMIDMRAVDIVQPDILYLGGICRTLRVVE 295 (388)
T ss_dssp HHHHTTCCEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCCHHH-----HHHHHHHTCCSEECCCHHHHTSHHHHHHHHH
T ss_pred HHhhcCCeEEECCCCccCHHHHHHHHHhcCCCEEcCCccCCHHH-----HHHHHHcCCCCEEEeCccccCCHHHHHHHHH
Confidence 999999999999998 789999999999999999999998753 555555 457999999999999999999999
Q ss_pred HHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCC-CCCceeec----cC
Q 041113 800 WAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVT-TDPISICH----NS 874 (983)
Q Consensus 800 ~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~-~~p~~~~~----~P 874 (983)
+|+++|++++.|+ +.++++.++++|+++++||... +.++... +.+.+.|. .|++ .+|+.+++ +|
T Consensus 296 ~A~~~gv~~~~h~-~~~~~~~~a~~hl~aa~pn~~~----~~e~~~~-----~~~~~~~~-~~~~~~~p~~~~~G~i~vp 364 (388)
T 3tcs_A 296 MARAAGLPVTPHC-ANWSLVTLFTMHLLRAIPNAGK----YLEFSIE-----GPDYYPWQ-EGLFVKTPYEIEDGHARVT 364 (388)
T ss_dssp HHHHTTCCBCCCC-CSTTTHHHHHHHHHTTCTTBCS----CEEEECC-----CTTTCGGG-TTCBSSCSCCCBTTEEEEC
T ss_pred HHHHcCCEEEecC-CCcHHHHHHHHHHHHhCCCccc----eeEeecC-----cccccchh-hhhccCCCceeeCCEEECC
Confidence 9999999977555 5677888899999999996411 1111110 11112333 3554 67787774 99
Q ss_pred CCCeeeEEecchhhhhhhcccc
Q 041113 875 CRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 875 ~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
++|||||++| ++.++++...
T Consensus 365 ~~PGLGveld--~~~l~~~~~~ 384 (388)
T 3tcs_A 365 DAPGWGVEIS--PEWLARSQYQ 384 (388)
T ss_dssp SSSBTCCCBC--HHHHHHSEEE
T ss_pred CCCCCCCeEC--HHHHHhCccc
Confidence 9999999999 8888776543
No 85
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=5.2e-54 Score=486.62 Aligned_cols=342 Identities=23% Similarity=0.295 Sum_probs=275.9
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
||| +|+++.+++||+.||.++.+.+ ..++.++|+| |++|++||||+.+.+ +++++...+...++.++|.++|+
T Consensus 3 ~~m-~i~~~~~~~pl~~p~~~s~~~~----~~~~~v~V~v-td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~~~~~l~g~ 76 (377)
T 2pge_A 3 SGM-ELSYRRSDLIFKRPAGTSRGVL----TSKPTWFVRL-DIDGHGGQGEVSLIPGLSLDPEEQIGRELDLLARRLRAE 76 (377)
T ss_dssp CCC-EEEEEECCEEBCC-------CC----CEECEEEEEE-EETTEEEEEEEECCTTTCSSCHHHHHHHHHHHHHHHHHS
T ss_pred cce-EEEEEEEeecccCcceeccEEE----eecceEEEEE-EcCCCEEEEEeccCCCCCcCCHHHHHHHHHHHHHHHhCC
Confidence 577 8999999999999999998765 3489999999 899999999999875 44577777777888899999999
Q ss_pred cccccccccccCc---hhhhhhh----------cCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccc
Q 041113 572 KISYFLPLLKGSF---SSWIWST----------LGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEIS 638 (983)
Q Consensus 572 ~~~~~~~~~~~~~---~~~~~~~----------~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~ 638 (983)
++.+...++.... .+.+++. .........++|++|||+||||+.||..|+|||+||||.+
T Consensus 77 d~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llGg~~------- 149 (377)
T 2pge_A 77 EPIRLRQFLAERGGADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFTRGE------- 149 (377)
T ss_dssp CCHHHHHHHHHTSSCTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTTTTS-------
T ss_pred CccchhhhhhccccccHHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCC-------
Confidence 8743211111000 0111100 0001123467899999999999999999999999999874
Q ss_pred cccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcC-CCcEEEEEcCCCCCHHHH
Q 041113 639 KRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVG-HRIELRVDANRNWTYQEA 717 (983)
Q Consensus 639 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g-~~~~l~vDaN~~~~~~~a 717 (983)
++||+|++++ ..+++++.+++++++++||++||+|+|. .++++|+++|+++|+++| +++.|++|+|++|++++|
T Consensus 150 ---~~vp~~~~i~-~~~~e~~~~~a~~~~~~G~~~~K~Kvg~-~~~~~d~~~v~avr~~~g~~~~~l~vDaN~~~~~~~a 224 (377)
T 2pge_A 150 ---KRIPVNGLIW-MGEAAFMQEQIEAKLAEGYGCLKLKIGA-IDFDKECALLAGIRESFSPQQLEIRVDANGAFSPANA 224 (377)
T ss_dssp ---CCEEBCEEEC-CCCHHHHHHHHHHHHHTTCSEEEEEC----CHHHHHHHHHHHHHHSCTTTCEEEEECTTBBCTTTH
T ss_pred ---CeEEEeEEec-CCCHHHHHHHHHHHHHHhhhhheeecCC-CChHHHHHHHHHHHHHcCCCCceEEEECCCCCCHHHH
Confidence 5789998874 4689999999999999999999999996 378999999999999999 999999999999999999
Q ss_pred HHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHH
Q 041113 718 LEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENA 794 (983)
Q Consensus 718 ~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~ 794 (983)
+++++.|+++++.|||||++ |++++++|++++++||++||++.+..+ . .+..+++ ..+|++++|++++||++++
T Consensus 225 ~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~-~--~~~~~i~~~a~d~i~ik~~~~GGit~~ 301 (377)
T 2pge_A 225 PQRLKRLSQFHLHSIEQPIRQHQWSEMAALCANSPLAIALDEELIGLGA-E--QRSAMLDAIRPQYIILKPSLLGGFHYA 301 (377)
T ss_dssp HHHHHHHHTTCCSEEECCBCSSCHHHHHHHHHHCSSCEEESGGGTTCCT-H--HHHHHHHHHCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHhcCCCcEEEccCCcccHHHHHHHHhhCCCcEEECCccCCcch-H--HHHHHHHhCCCCEEEECchhcCCHHHH
Confidence 99999999999999999998 899999999999999999999999874 1 1334443 4579999999999999999
Q ss_pred HHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee
Q 041113 795 GLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC 871 (983)
Q Consensus 795 ~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~ 871 (983)
++++++|+++|+++++||++||++++++++|++++++|. ..+++++..++.+|++ +|+.++
T Consensus 302 ~~i~~~A~~~g~~~~~~~~~es~i~~~a~~hlaa~~~~~---------------~~~~l~~~~~~~~d~~-~~~~~~ 362 (377)
T 2pge_A 302 GQWIELARERGIGFWITSALESNLGLAAIAQWTALYQPT---------------MPQGLGTGQLYTNNLP-SNLAVD 362 (377)
T ss_dssp HHHHHHHHHTTCEEEEBCCSCCHHHHHHHHHHHHTTCCS---------------SCBBCSCCCCBSSCCC-CCCEEC
T ss_pred HHHHHHHHHCCCeEEecCCcccHHHHHHHHHHHHCCCCC---------------ccccCCchhhhHhhcc-CCceee
Confidence 999999999999999999999999999999999998852 2344566667788886 677776
No 86
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=100.00 E-value=2.5e-54 Score=515.23 Aligned_cols=394 Identities=13% Similarity=0.123 Sum_probs=313.2
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.++ +|||||+||+|++..+...... ..+... . .+...++++.+++++
T Consensus 136 ~~~~~i~~A~~~A~~~-~GPV~l~iP~dv~~~~~~~~~~-------------~~~~~~--~----~~~~~~~~~~i~~~~ 195 (549)
T 3eya_A 136 QIPQVLAIAMRKAVLN-RGVSVVVLPGDVALKPAPEGAT-------------MHWYHA--P----QPVVTPEEEELRKLA 195 (549)
T ss_dssp GHHHHHHHHHHHHHHT-TSEEEEEEEHHHHTSBCCTTCC-------------CCCCCC--C----CCEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCCEEEEeChhHhhcccCcccc-------------cccccc--C----CCCCCCCHHHHHHHH
Confidence 3688999999999994 6999999999976544321000 000000 0 012245677899999
Q ss_pred HHHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCC
Q 041113 81 ELVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQ 160 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~ 160 (983)
++|++||||+|++|+|+. ++.+++.+|||++|+||++|++ | ||+||++||++ +|++|..+...++..+++
T Consensus 196 ~~l~~A~rpvIl~G~g~~-~a~~~l~~lae~~~~Pv~~t~~-g------kg~~~~~hp~~--~G~~G~~~~~~~~~~~~~ 265 (549)
T 3eya_A 196 QLLRYSSNIALMCGSGCA-GAHKELVEFAGKIKAPIVHALR-G------KEHVEYDNPYD--VGMTGLIGFSSGFHTMMN 265 (549)
T ss_dssp HHHHTCCSEEEEECGGGT-TCHHHHHHHHHHHTCCEEECGG-G------HHHHSSSCTTB--CCCCSTTSCHHHHHHHHH
T ss_pred HHHHhCCCcEEEECCCch-HHHHHHHHHHHHhCCCEEECCc-c------CcCCCCCCccc--ccCCCCCCCHHHHHHHHh
Confidence 999999999999999874 4567999999999999999998 6 89999999996 788887777667778899
Q ss_pred CCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRALD 239 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~~ 239 (983)
||+||++|++++.. ..++ ..++||||.|+.+++++++.++.+.+|++.++++|.+.+.......|.+.+.+..
T Consensus 266 aDlvl~iG~~~~~~------~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~~~~~~~~ 339 (549)
T 3eya_A 266 ADTLVLLGTQFPYR------AFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDKALEDY 339 (549)
T ss_dssp CSEEEEESCCCCCG------GGSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGSCCCCCCHHHHHHHHHH
T ss_pred CCEEEEECCCCCcc------ccCCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhccccCcHHHHHHHHHHH
Confidence 99999999998632 1233 3479999999999999999999999999999999999886655667888776665
Q ss_pred HHHHHHHHhhh-cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 240 MMVASEISFQI-CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 240 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
+.+........ ..+.++++..+++.|++.++++++++.|+|+ +.+|..+++.+ +.|++|+. ++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G~----~~~~~~~~~~~-~~~~~~~~-----------~~ 403 (549)
T 3eya_A 340 RDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGT----PTVWAARYLKM-NGKRRLLG-----------SF 403 (549)
T ss_dssp HHHHHHHHHTSCCCSSCBCHHHHHHHHHHHSCTTCEEEECTTH----HHHHHHHHCCC-CSSCEEEC-----------CT
T ss_pred HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhCCCCCEEEEcCcH----HHHHHHHhCcc-CCCCcEEe-----------CC
Confidence 55544333222 2246799999999999999999999999999 55555444443 44554442 47
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|+++|. +++||+++|||||+|++|||+|+++ +++|+++||+||++|++++..+.. ..
T Consensus 404 ~~g~mG~--~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~ta~~--~~l~~~ivv~nN~~~g~~~~~~~~-----~~ 474 (549)
T 3eya_A 404 NHGSMAN--AMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQ--MKLPVKIVVFNNSVLGFVAMEMKA-----GG 474 (549)
T ss_dssp TTCCTTC--HHHHHHHHHHHSTTSCEEEEEEHHHHHHTGGGHHHHHH--TTCCCEEEEEECSBCCCC-------------
T ss_pred CCchhhh--HHHHHHHHHHhCCCCcEEEEEccchhhccHHHHHHHHH--hCCCeEEEEEeCCccHHHHHHHHh-----cC
Confidence 8899999 999999999999 9999999999999999999999999 999999999999999998754211 11
Q ss_pred cccccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccc
Q 041113 398 LDQYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDAN 455 (983)
Q Consensus 398 ~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~ 455 (983)
+...+.+.+++||.++|++||+++++|++.+||+++|+++++.+||+||||.++++++
T Consensus 475 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~~~~ 532 (549)
T 3eya_A 475 YLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEEL 532 (549)
T ss_dssp ----CCBCCCCCHHHHHHHTTSEEEEECSGGGHHHHHHHHHHSSSCEEEEEEBCCCCS
T ss_pred CCCcCCcCCCCCHHHHHHHcCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEEEeccccc
Confidence 2233444567999999999999999999999999999999999999999999998764
No 87
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=1.5e-53 Score=492.26 Aligned_cols=361 Identities=16% Similarity=0.182 Sum_probs=279.8
Q ss_pred CccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHh
Q 041113 489 SLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 489 ~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l 568 (983)
+|+..||++++++++... ..|..+..|.+ +.+ ....||+|+||+|++||||+... + .+.+.++.+.|.|
T Consensus 22 ~~~~p~i~~~~v~pva~~-d~~l~~~~g~h--~p~-f~RtiV~v~Td~Gi~G~GE~~g~----~---~~~~~le~~~p~l 90 (464)
T 4g8t_A 22 SMSTPIITEMQVIPVAGH-DSMLLNLSGAH--SPY-FTRNIVILKDNSGNTGVGEVPGG----E---KIRQTLEDAKPLV 90 (464)
T ss_dssp --CCCBEEEEEEEEEEEE-CCCBEETTEEC--CSE-EEEEEEEEEETTSCEEEEEEECC----H---HHHHHHHHHGGGT
T ss_pred ccCCCEEeEEEEEEecCC-CcccccCCccc--CCc-cceEEEEEEECCCCEEEEeCCCc----H---HHHHHHHHHHHHH
Confidence 466669999999998753 34555555443 112 33458999999999999998532 2 2344567789999
Q ss_pred ccCcccccccccccCchhhhhhh---cCC--CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC-CCCccccccccccc
Q 041113 569 TGAKISYFLPLLKGSFSSWIWST---LGI--PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY-PLTEIDEEISKRST 642 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG-g~~~~~~~~~~~~~ 642 (983)
+|+++.+++.++..+........ .+. ........|+||||+|||||+||.+|+|||+||| |+. ++
T Consensus 91 iG~dp~~ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG~~---------Rd 161 (464)
T 4g8t_A 91 IGKTLGEYKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGDGQQ---------RD 161 (464)
T ss_dssp TTCBGGGHHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTTSCC---------CS
T ss_pred cCCCHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCC---------Cc
Confidence 99999987776653322111000 000 0112456799999999999999999999999999 665 68
Q ss_pred eeEEEEeecC----------------------------CCCHHHHHHHHHHhhh-cCCCEEEEeccCCCChHHHHHHHHH
Q 041113 643 SIKICALIDS----------------------------NKSPVEVASIATTLVE-EGFTAIKLKVARRADPIKDAEVIQE 693 (983)
Q Consensus 643 ~i~~~~~~~~----------------------------~~~~~~~~~~~~~~~~-~G~~~~KiKig~~~~~~~d~~~v~~ 693 (983)
+|++|++... ..+++++++++++..+ .||++||+|+|. .++++|+++|++
T Consensus 162 ~V~~y~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KlKvG~-~~~~~di~~v~a 240 (464)
T 4g8t_A 162 AVEMLGYLFFIGDRKKTTLAYQNQENDPCDWYRVRHEEAMTPESVVRLAEAAYEKYGFNDFKLKGGV-LDGFEEAEAVTA 240 (464)
T ss_dssp EEEBCEEECCBCCGGGSCSCCCCCTTCSSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEEEECSS-SCHHHHHHHHHH
T ss_pred eEEEEEEeeccCcccccchhhhcccccccchhhhcccccCCHHHHHHHHHHHHHHcCCCeEEEeCCC-CCHHHHHHHHHH
Confidence 9999987531 1256777777776654 699999999997 478999999999
Q ss_pred HHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--C----hHHHHHHHhhcCCcEEeCCCccCcCCChH
Q 041113 694 VRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--N----EEDIIKYCEESGLPVALDETIDKFQKDPL 767 (983)
Q Consensus 694 vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~ 767 (983)
+|+++| ++.||||+|++||+++|+++++.|+++ +.|||||++ + .+.+++|++++++|||+||++++..+
T Consensus 241 vrea~p-d~~L~vDaN~~wt~~~Ai~~~~~le~~-l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~--- 315 (464)
T 4g8t_A 241 LAKRFP-DARITLDPNGAWSLDEAVKIGKQLKGV-LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQ--- 315 (464)
T ss_dssp HHHHST-TCCEEEECTTCBCHHHHHHHHHHTTTT-CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHH---
T ss_pred HHhhCC-CceEEEECCCccCHHHHHHHHHHhhhc-cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhh---
Confidence 999995 799999999999999999999999998 999999998 3 25578899999999999999999764
Q ss_pred HHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCC
Q 041113 768 NMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELC 846 (983)
Q Consensus 768 ~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~ 846 (983)
+..+++.+ +|++++| +++|||+++++++++|+++|++++.|++.+++|++++++|+++++||...
T Consensus 316 --~~~~i~~~avdi~~~d-~~~GGit~~~kia~lA~~~gi~v~~h~~~~~~I~laA~~hlaaa~pn~~~----------- 381 (464)
T 4g8t_A 316 --MGHTISLQSVDIPLAD-PHFWTMQGSIRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGDIT----------- 381 (464)
T ss_dssp --HHHHHHHTCCSEEBCC-HHHHCHHHHHHHHHHHHHHTCCCBCCCCSCCHHHHHHHHHHHTTCCSCCC-----------
T ss_pred --HHHHHHhhCCCEEecc-ccccchHHHHHHHHHHHHcCCEEEEcCCcccHHHHHHHHHHHHhCCCCCc-----------
Confidence 55555544 6888888 58999999999999999999999988899999999999999999986310
Q ss_pred CCCccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhc
Q 041113 847 PPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNL 893 (983)
Q Consensus 847 ~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~ 893 (983)
.... ......+.++++.+|+.+++ +|++||||||+| ++.++++
T Consensus 382 -~~~~-~~~~~~~~~~l~~~p~~i~dG~i~vP~~PGLGvelD--~d~l~ky 428 (464)
T 4g8t_A 382 -AIDT-HWIWQEGNQRLTKEPFQIKGGLVEVPKKPGLGVELD--MDQVMKA 428 (464)
T ss_dssp -CBCC-CHHHHTTSCCSBSSCCCEETTEEECCSSSBTCCCBC--HHHHHHH
T ss_pred -cccc-cccccchhHhhcCCCCeeECCEEECCCCCCCceEEC--HHHHHHH
Confidence 0000 01123346788899999984 999999999999 7777775
No 88
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=1.6e-53 Score=488.95 Aligned_cols=358 Identities=15% Similarity=0.194 Sum_probs=284.1
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEee-cCcCcCcccHHHHHHHHHHHHhHh
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEV-APLEIHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~-~~~~~~~~~~~~~~~~l~~~~~~l 568 (983)
|+.|||++|+++.+++|+..|+.+ ...++|+|+|++|++||||+ .+... +...+...++.+.|.|
T Consensus 1 ~~~MkI~~i~~~~~~~p~~~p~~~-----------~~~v~V~v~td~G~~G~Ge~a~~~g~---~~~~~~~~i~~l~p~l 66 (407)
T 2o56_A 1 MSLMKITSVDIIDVANDFASATSK-----------WRPVVVKINTDEGISGFGEVGLAYGV---GASAGIGMAKDLSAII 66 (407)
T ss_dssp --CCCEEEEEEEECCCCC-----C-----------CCCEEEEEEETTSCEEEEEESCSSSS---CHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEEeccccCCCccc-----------ceeEEEEEEeCCCCEEEEeeccCCCC---chHHHHHHHHHHHHHh
Confidence 456899999999999999888531 13579999999999999999 44322 2234455667799999
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
+|+++.+++.++..+.....+.. ...+...+|++|||+||||++||.+|+|||+||||.. +++||+|+
T Consensus 67 iG~d~~~~~~i~~~l~~~~~~~~---~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~---------~~~vp~y~ 134 (407)
T 2o56_A 67 IGMDPMNNEAIWEKMLKKTFWGQ---GGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLGGKS---------REKIRTYA 134 (407)
T ss_dssp TTSCTTCHHHHHHHHHHSSSGGG---GCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------CSSEEEEE
T ss_pred CCCChHHHHHHHHHHHHhccccC---CCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCCCC---------CCeeeeee
Confidence 99998876655432211000000 1123457899999999999999999999999999975 47799998
Q ss_pred e-ec-CCC---------CHHHHHHHHHHhhhcCCCEEEEec------cCC-----------CChHHHHHHHHHHHHHcCC
Q 041113 649 L-ID-SNK---------SPVEVASIATTLVEEGFTAIKLKV------ARR-----------ADPIKDAEVIQEVRKKVGH 700 (983)
Q Consensus 649 ~-~~-~~~---------~~~~~~~~~~~~~~~G~~~~KiKi------g~~-----------~~~~~d~~~v~~vr~~~g~ 700 (983)
+ +. +.. +++++.+.+++++++||++||+|+ |.. .+++.|+++|++||+++|+
T Consensus 135 ~~i~~g~~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~ 214 (407)
T 2o56_A 135 SQLQFGWGDGSDKDMLTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGP 214 (407)
T ss_dssp ECGGGCCSTTCTTCCCCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred eeccCCccccccccccCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCC
Confidence 7 53 223 899999999999999999999997 420 0357799999999999999
Q ss_pred CcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-
Q 041113 701 RIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG- 777 (983)
Q Consensus 701 ~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~- 777 (983)
++.|++|+|++|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+.. .+..+++.+
T Consensus 215 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~ 289 (407)
T 2o56_A 215 DVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYWRW-----GYRPFLENGS 289 (407)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCCHHH-----HHHHHHHTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcCCHH-----HHHHHHHcCC
Confidence 9999999999999999999999999999999999998 78999999999999999999999865 366666544
Q ss_pred ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc--
Q 041113 778 IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT-- 855 (983)
Q Consensus 778 ~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~-- 855 (983)
+|++++|++++||++++++++++|+++|+++++|++ .|+|++++++||+++++|+. . +.+..
T Consensus 290 ~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~-~s~i~~aa~~hlaaa~~~~~--~-------------~e~~~~~ 353 (407)
T 2o56_A 290 LSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVC-GGPISTAVALHMETAIPNFV--I-------------HELHRYA 353 (407)
T ss_dssp CSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC-SCHHHHHHHHHHHHHCTTBC--C-------------EEEEGGG
T ss_pred CCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC-CCHHHHHHHHHHHHhCCCce--e-------------Eeecccc
Confidence 799999999999999999999999999999988776 59999999999999998641 1 01101
Q ss_pred hhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 856 YQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 856 ~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
...+..|++.+|+.+++ +|++||||+++| ++.++++.+.
T Consensus 354 ~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~~ 396 (407)
T 2o56_A 354 LLEPNTQTCKYNYLPKNGMYEVPELPGIGQELT--EETMKKSPTI 396 (407)
T ss_dssp GSHHHHTTBSCCCCCBTTEECCCCSSBTSCCBC--HHHHHHSCEE
T ss_pred ccccHHHhccCCceecCCEEECCCCCCCCceeC--HHHHHhccCC
Confidence 11235677777888874 899999999999 8888777643
No 89
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=6.5e-53 Score=480.13 Aligned_cols=355 Identities=17% Similarity=0.180 Sum_probs=285.2
Q ss_pred eeEeEEEEEEEEeeCCCCCc---cc-cccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHH-HHHhH
Q 041113 493 CKICRMEYSLYRIQLCAPPT---SS-YIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHF 567 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~---~~-~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~ 567 (983)
|||++|+++.+++|++.||. ++ .+.+ ..++.++|+|+|++|++||||+.+ ++. +...++ .++|.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~----~~~~~~~V~v~td~G~~G~GE~~~-----~~~--~~~~i~~~l~~~ 69 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPA----HQVEQAMLTVRTEDGQEGHSFTAP-----EIV--RPHVIEKFVKKV 69 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEE----EEEEEEEEEEEETTSCEEEEEECG-----GGG--CHHHHHHTHHHH
T ss_pred CeEeEEEEEEEecCCCCccccccccccccc----ccceEEEEEEEECCCCEEEEEecC-----chH--HHHHHHHHHHHH
Confidence 69999999999999999987 66 4332 347899999999999999999972 111 234455 48899
Q ss_pred hccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 568 MTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 568 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
|+|+++.++..++..+.. .... ...+..++|++|||+||||++||.+|+|||+||||.+ ++||+|
T Consensus 70 l~g~d~~~~~~~~~~l~~----~~~~-~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~----------~~vp~~ 134 (382)
T 1rvk_A 70 LIGEDHRDRERLWQDLAH----WQRG-SAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIGGYR----------DKVLAY 134 (382)
T ss_dssp HTTSBTTCHHHHHHHHHH----HHTT-TTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHCCSC----------SEEEEE
T ss_pred HcCCChHHHHHHHHHHHH----hhhc-ccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhCCCC----------Ccceec
Confidence 999998876555432211 1111 1123467899999999999999999999999999974 679999
Q ss_pred Eeec-C------CCCHHHHHHHHHHhhhcCCCEEEEeccCC-----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHH
Q 041113 648 ALID-S------NKSPVEVASIATTLVEEGFTAIKLKVARR-----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQ 715 (983)
Q Consensus 648 ~~~~-~------~~~~~~~~~~~~~~~~~G~~~~KiKig~~-----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~ 715 (983)
+++. + ..+++++.+.+++++++||++||+|+|.+ .+++.|+++|++||+++|+++.|++|+|++|+.+
T Consensus 135 ~~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~ 214 (382)
T 1rvk_A 135 GSIMCGDELEGGLATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRT 214 (382)
T ss_dssp EEECCCCCCTTTTSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHH
T ss_pred EEeccCccccccCCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHH
Confidence 7653 2 36899999999999999999999999861 1578999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccC-cCCChHHHHHhhcCC-CceEEEEcCCCcCCH
Q 041113 716 EALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDK-FQKDPLNMLEKYAHP-GIVAIVIKPSVIGGF 791 (983)
Q Consensus 716 ~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~-~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl 791 (983)
+|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+ ..+ +..+++. .+|++++|++++||+
T Consensus 215 ~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~-----~~~~i~~~~~d~v~ik~~~~GGi 289 (382)
T 1rvk_A 215 DALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWH-----RAEWIKAGACDILRTGVNDVGGI 289 (382)
T ss_dssp HHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHH-----HHHHHHTTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHH-----HHHHHHcCCCCEEeeCchhcCCH
Confidence 9999999999999999999998 788999999999999999999999 753 5555544 579999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhcccc-CCCCCccCccchhcccccCCCCCcee
Q 041113 792 ENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRE-LCPPVAQGLGTYQWLKEDVTTDPISI 870 (983)
Q Consensus 792 ~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~d~~~~p~~~ 870 (983)
+++++++++|+++|+++++| +++++ ++|++++++|+. . .++. +.+...+.+ .+++.+|++ +|+.
T Consensus 290 t~~~~i~~~A~~~g~~~~~~-~~~~~-----~~~laaa~~~~~--~---~E~~~~~~~~~~~~--~~~~~~d~~-~~~~- 354 (382)
T 1rvk_A 290 TPALKTMHLAEAFGMECEVH-GNTAM-----NLHVVAATKNCR--W---YERGLLHPFLEYDD--GHDYLKSLS-DPMD- 354 (382)
T ss_dssp HHHHHHHHHHHHTTCCEEEC-CCSHH-----HHHHHHHCSSCC--C---EEEEEECTTSCGGG--CCTTBSSCS-SCBC-
T ss_pred HHHHHHHHHHHHcCCeEeec-CCCCH-----HHHHHHhCCccc--e---eeeccccccccccc--cchhHHhhc-cCCC-
Confidence 99999999999999998877 78887 899999998631 1 1111 000000111 233467887 7777
Q ss_pred ec----cCCCCeeeEEecchhhhhhhccc
Q 041113 871 CH----NSCRGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 871 ~~----~P~~pGlGv~~d~a~~~~~~~~~ 895 (983)
++ +|++||||+++| ++.++++.+
T Consensus 355 ~~G~~~~p~~PGlGv~~d--~~~l~~~~~ 381 (382)
T 1rvk_A 355 RDGFVHVPDRPGLGEDID--FTFIDNNRV 381 (382)
T ss_dssp TTSEEECCSCSBTCCCBC--HHHHHHTBC
T ss_pred cCCEEECCCCCCCccccC--HHHHHhhcC
Confidence 63 899999999999 888877654
No 90
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=3.3e-53 Score=482.76 Aligned_cols=359 Identities=17% Similarity=0.192 Sum_probs=283.0
Q ss_pred ceeEeEEEEEEEEeeCCCCCcccccccc--CcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHN--RSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~--~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~ 569 (983)
.|||++|+++.+++||+.||.++.+... ...+.++.++|+|+|++|++||||+.......+ .+...++.++|.|+
T Consensus 12 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~~~---~~~~~i~~l~~~l~ 88 (393)
T 2og9_A 12 SDRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKRAGGP---GQFAHAREIAPALI 88 (393)
T ss_dssp CCCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEESTTHH---HHHHHHHHHGGGGT
T ss_pred CCeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEecCcccchH---HHHHHHHHHHHHHc
Confidence 3899999999999999999999865100 001347899999999999999999932222222 34445667899999
Q ss_pred cCcccccccccccCchhhhhhhc-CCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEE
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTL-GIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICA 648 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~ 648 (983)
|+++.++..++..+. ... .....+..++|++|||+||||++||.+|+|||+||||.+ ++||+|+
T Consensus 89 G~d~~~~~~i~~~l~-----~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llGg~~----------~~vp~y~ 153 (393)
T 2og9_A 89 GEDPSDIAKLWDKLC-----WAGASAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLGSYR----------DSVRCYN 153 (393)
T ss_dssp TSCTTCHHHHHHHHH-----HTTGGGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHCCSC----------SEEEEEB
T ss_pred CCChhhHHHHHHHHH-----HhhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CceEEEE
Confidence 999887655543221 110 011223567999999999999999999999999999975 6799998
Q ss_pred eecCC-C-CHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc
Q 041113 649 LIDSN-K-SPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD 726 (983)
Q Consensus 649 ~~~~~-~-~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~ 726 (983)
+++.. . +++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++|++++|+++++.|++
T Consensus 154 ~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~-~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~ 232 (393)
T 2og9_A 154 TSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQ-PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEP 232 (393)
T ss_dssp CTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCC-SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGG
T ss_pred ECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCC-CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 74222 3 89999999999999999999999996 368999999999999999999999999999999999999999999
Q ss_pred CCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 727 CDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 727 ~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
+++.|||||++ +++.+++|++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|++
T Consensus 233 ~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~ 307 (393)
T 2og9_A 233 FNLVWIEEPLDAYDHEGHAALALQFDTPIATGEMLTSAA-----EHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEH 307 (393)
T ss_dssp GCCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHH-----HHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHH
T ss_pred hCCCEEECCCCcccHHHHHHHHHhCCCCEEeCCCcCCHH-----HHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHH
Confidence 99999999998 78899999999999999999999865 36666654 479999999999999999999999999
Q ss_pred cCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCee
Q 041113 804 HGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFV 879 (983)
Q Consensus 804 ~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGl 879 (983)
+|++++.|++.+ .++|++++++|.. . . + ...+ ..+++.+|+.+++ +|++|||
T Consensus 308 ~gi~~~~h~~~~------~~~~laaa~~~~~--~---~--e----------~~~~-~~~~~~~~~~~~~G~~~~p~~PGl 363 (393)
T 2og9_A 308 AGLMLAPHFAME------LHVHLAAAYPREP--W---V--E----------HFEW-LEPLFNERIEIRDGRMLVPTRPGL 363 (393)
T ss_dssp TTCEECCCSCHH------HHHHHHHTSSSCC--E---E--E----------CCCT-TGGGBSCCCCEETTEEECCCSSBT
T ss_pred cCCEEeccCccH------HHHHHHhhCCCCc--e---e--e----------cccc-hHHHccCCCeeeCCEEECCCCCCC
Confidence 999988766543 3689999988631 1 0 0 0112 2346667888874 8999999
Q ss_pred eEEecchhhhhhhccccccccc
Q 041113 880 EASVAKATHILQNLQINNDVIC 901 (983)
Q Consensus 880 Gv~~d~a~~~~~~~~~~~~~i~ 901 (983)
|+++| ++. +++++....+.
T Consensus 364 Gv~~d--~~~-~~~~~~~~~~~ 382 (393)
T 2og9_A 364 GLTLS--GQV-KAWTREEAQVG 382 (393)
T ss_dssp CCCBC--THH-HHHEEEEEEEE
T ss_pred CeeeC--HHH-HHhccCHHhhC
Confidence 99999 555 67766554443
No 91
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=3e-53 Score=483.40 Aligned_cols=357 Identities=17% Similarity=0.204 Sum_probs=285.4
Q ss_pred eeEeEEEEEEEEeeCCCCCcccccccc--CcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHN--RSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~--~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g 570 (983)
|||++|+++.+++|++.||.++.+... ...+.++.++|+|+|++|++||||+.......+ .+...++.++|.|+|
T Consensus 26 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~~~---~~~~~~~~l~p~l~G 102 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKRAGGQ---GIYAHAKEIADNLLG 102 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESSTTHH---HHHHHHHHHGGGGTT
T ss_pred CeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEecCccchHH---HHHHHHHHHHHHHcC
Confidence 899999999999999999998854100 001348899999999999999999943222222 344456678999999
Q ss_pred CcccccccccccCchhhhhhhcC-CCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 571 AKISYFLPLLKGSFSSWIWSTLG-IPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
+++.++..++..+. .... ....+..++|++|||+||||++||.+|+|||+||||.+ ++||+|++
T Consensus 103 ~d~~~~~~i~~~l~-----~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg~~----------~~vp~y~~ 167 (398)
T 2pp0_A 103 EDPNDIDKIYTKLL-----WAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGAHR----------DSVQCYNT 167 (398)
T ss_dssp SCTTCHHHHHHHHH-----HHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHCCSC----------SEEEEEEC
T ss_pred CCchhHHHHHHHHH-----HhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC----------CCeeEEEe
Confidence 99887655543221 1100 11224567899999999999999999999999999975 67999987
Q ss_pred ecC--CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 650 IDS--NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 650 ~~~--~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
++. ..+++++.+.+++++++||++||+|+|.+ +++.|+++|++||+++|+++.|++|+|++|++++|+++++.|+++
T Consensus 168 ~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~-~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~ 246 (398)
T 2pp0_A 168 SGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQP-NCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQF 246 (398)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCS-CHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred cCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCC-CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHc
Confidence 522 23899999999999999999999999963 789999999999999999999999999999999999999999999
Q ss_pred CCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 728 DLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 728 ~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
++.|||||++ +++.+++|++++++||++||++.+.. .+..+++. .+|++++|++++||++++++++++|+++
T Consensus 247 ~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~ 321 (398)
T 2pp0_A 247 NLIWIEEPLDAYDIEGHAQLAAALDTPIATGEMLTSFR-----EHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKH 321 (398)
T ss_dssp TCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHH-----HHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHT
T ss_pred CCceeeCCCChhhHHHHHHHHhhCCCCEEecCCcCCHH-----HHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 9999999998 78899999999999999999999865 36666654 4799999999999999999999999999
Q ss_pred CCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeee
Q 041113 805 GKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVE 880 (983)
Q Consensus 805 gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlG 880 (983)
|++++.|++.+ .++|++++++|.. . . +...+ ..+++.+|+.+++ +|++||||
T Consensus 322 gi~~~~h~~~~------~~~~laaa~~~~~--~---~------------e~~~~-~~~~~~~~~~~~~G~i~~p~~PGlG 377 (398)
T 2pp0_A 322 GRKLAPHFAME------VHLHLSAAYPLEP--W---L------------EHFEW-LNPLFNEQLELRDGRMWISDRHGLG 377 (398)
T ss_dssp TCEECCCSCHH------HHHHHHHTCSSCC--C---E------------EECST-TGGGBSCCCEEETTEEECCSSSBTC
T ss_pred CCeEeecCccH------HHHHHHhcCCCcc--e---e------------ecccc-hhhhccCCCeeeCCEEECCCCCCCC
Confidence 99988666544 2689999988631 0 0 01112 2346677888874 89999999
Q ss_pred EEecchhhhhhhcccccccc
Q 041113 881 ASVAKATHILQNLQINNDVI 900 (983)
Q Consensus 881 v~~d~a~~~~~~~~~~~~~i 900 (983)
+++| ++. +++++....+
T Consensus 378 v~~d--~~~-~~~~~~~~~~ 394 (398)
T 2pp0_A 378 FTLS--EQA-RRWTQLTCEF 394 (398)
T ss_dssp CCBC--HHH-HHTEEEEEEE
T ss_pred cccC--HHH-HHhhhcHHhc
Confidence 9999 553 7776654443
No 92
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=1.9e-52 Score=477.16 Aligned_cols=350 Identities=17% Similarity=0.133 Sum_probs=284.6
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHh-HhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLH-FMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~-~l~g~ 571 (983)
|||++|+++.++ |. + ...++|+|+|++|++||||+.+. + +++...+...++.+.| .|+|+
T Consensus 3 mkI~~i~~~~v~-~~--~--------------~~~v~V~v~td~G~~G~GE~~~~-~-g~~~~~~~~~i~~l~~~~l~G~ 63 (392)
T 2poz_A 3 LKITGVNIYLLK-SG--R--------------LHPVLVEISTDEGITGAGEAGIA-Y-GVGGTAAAGMIKDLSERFLIGK 63 (392)
T ss_dssp CCEEEEEEEECC-BT--T--------------BCCEEEEEEETTSCCEEEEESCS-S-SSCHHHHHHHHHHHHHHHTTTC
T ss_pred CeEEEEEEEEEe-cC--C--------------ccEEEEEEEECCCCEEEEeecCC-c-CCchHHHHHHHHHhhHhhhcCC
Confidence 899999999886 32 1 12579999999999999999764 1 3444455666778999 99999
Q ss_pred cccccccccccCchhhhhhhcCC--CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGI--PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
++.+++.++..+ ...... ...+..++|++|||+||||++||.+|+|||+||||.. +++||+|++
T Consensus 64 d~~~~~~i~~~l-----~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~---------~~~v~~y~~ 129 (392)
T 2poz_A 64 DPSRIEELWSTM-----YDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFGGKI---------RDRVRAYAN 129 (392)
T ss_dssp CTTCHHHHHHHH-----HHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------CSEEEEEEC
T ss_pred ChhHHHHHHHHH-----HHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcCCCc---------cCceEEEEe
Confidence 988766554322 111111 1223457899999999999999999999999999975 468999985
Q ss_pred --ecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC----------------CChHHHHHHHHHHHHHcCCCcEEEEEcCCC
Q 041113 650 --IDSNKSPVEVASIATTLVEEGFTAIKLKVARR----------------ADPIKDAEVIQEVRKKVGHRIELRVDANRN 711 (983)
Q Consensus 650 --~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~----------------~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~ 711 (983)
.....+++++.+.+++++++||++||+|+|.+ .+++.|+++|++||+++|+++.|++|+|++
T Consensus 130 g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~ 209 (392)
T 2poz_A 130 GWYGAADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGG 209 (392)
T ss_dssp SCCTTCCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred ccccCCCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 32346899999999999999999999999820 135789999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCc
Q 041113 712 WTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVI 788 (983)
Q Consensus 712 ~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~ 788 (983)
|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+.. .+..+++.+ +|++++|++++
T Consensus 210 ~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~ 284 (392)
T 2poz_A 210 LTTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRF-----GFRKIFELQACGIIQPDIGTA 284 (392)
T ss_dssp SCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHH-----HHHHHHTTTCCSEECCCTTTS
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHH-----HHHHHHHcCCCCEEecCcccc
Confidence 99999999999999999999999998 78899999999999999999999864 466777655 79999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCcc-chhcccccCCCCC
Q 041113 789 GGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLG-TYQWLKEDVTTDP 867 (983)
Q Consensus 789 GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~d~~~~p 867 (983)
||++++++++++|+++|+++++|++. ++|++++++||+++++|+. . .+ +..+ .+..+.+|++.+|
T Consensus 285 GGit~~~~i~~~A~~~g~~~~~h~~~-s~i~~aa~~hlaaa~~~~~--~---~e--------~~~~~~~~~~~~d~~~~~ 350 (392)
T 2poz_A 285 GGLMETKKICAMAEAYNMRVAPHVCG-SSLIETATLQLEANITNFM--I---HE--------HYPAFKADDGYVEVLENP 350 (392)
T ss_dssp SCHHHHHHHHHHHHTTTCEECCCCCS-SHHHHHHHHHHHHHCTTBC--C---EE--------ECGGGGGSTTCCCCBSSC
T ss_pred CCHHHHHHHHHHHHHcCCeEecCCCC-CHHHHHHHHHHHHhCCCce--E---Ee--------eccccccCchHHHhccCC
Confidence 99999999999999999999988876 9999999999999998641 1 00 1110 1112346777788
Q ss_pred ceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 868 ISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 868 ~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
+.+++ +|++||||+++| ++.++++...
T Consensus 351 ~~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~~ 381 (392)
T 2poz_A 351 PSISSGYFEMPNGPGLGAVLI--KRNIEPYLWA 381 (392)
T ss_dssp CCEETTEEECCCSSBTSCCBC--HHHHGGGEEE
T ss_pred CeecCCEEECCCCCCCCceeC--HHHHHhccCC
Confidence 88874 899999999999 8887776643
No 93
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=100.00 E-value=1.9e-52 Score=499.31 Aligned_cols=406 Identities=29% Similarity=0.443 Sum_probs=300.1
Q ss_pred HHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhH-HHHH
Q 041113 2 ILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQM-AEVL 80 (983)
Q Consensus 2 i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~ 80 (983)
+++++++|+ .++|||||||+||+|+++.+............+..|.+...+. ...+..+.+ ++++
T Consensus 148 i~~~i~~A~---~~~r~GPV~i~iP~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 213 (556)
T 3hww_A 148 LVSTIDHAL---GTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPW-----------LREAPRLESEKQRD 213 (556)
T ss_dssp HHHHHHHHH---HSCCSSCEEEEEECCSCCSCCCSSTTHHHHHTTGGGGGCCSCS-----------SCCCCCCCCCCCTT
T ss_pred HHHHHHHHH---hcCCCCCEEEeCCcCCCCCCCcccccccccccccccccccccc-----------ccccccccchhhhh
Confidence 667788888 3689999999999997765321100000000001111000000 001111122 2345
Q ss_pred HHHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCC
Q 041113 81 ELVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQ 160 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~ 160 (983)
++|.+||||+|++|++ +.++.+++.+|||++|+||++|+++| ||.++++||++ +| +..++..+++
T Consensus 214 ~~l~~A~rPvIl~G~~-~~~a~~~l~~lae~~~~PV~~t~~~~------~~~~~~~~~~~--lg------~~~~~~~~~~ 278 (556)
T 3hww_A 214 WFFWRQKRGVVVAGRM-SAEEGKKVALWAQTLGWPLIGDVLSQ------TGQPLPCADLW--LG------NAKATSELQQ 278 (556)
T ss_dssp HHHHTTSCEEEEECBC-CHHHHHHHHHHHHHHTCCEEECTTTC------SCCSSCCHHHH--TT------SHHHHHHHTT
T ss_pred hhhccCCCeEEEECCC-ChHHHHHHHHHHHhcCCEEEEccCCC------CCCCcCcHHHH--hc------CchhhhcccC
Confidence 6788999999999985 45667899999999999999998767 79999999985 33 2345567889
Q ss_pred CCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRALDM 240 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~~~ 240 (983)
||+||+||+++++..+.+|...+.+.++||||+|+.++++++++++.|++|++.++++|.+. ....|.+++.+.++
T Consensus 279 aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l~~~----~~~~w~~~~~~~~~ 354 (556)
T 3hww_A 279 AQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAE----KRQPWCVEIPRLAE 354 (556)
T ss_dssp CSEEEEESBCCCCHHHHHHHHHCCCSEEEEEESSCSCCCTTCCSEEEEESCHHHHHHHSCCC----CCCCCCSSHHHHHH
T ss_pred CCEEEEcCCCcccHHHHHHHhcCCCCeEEEECCCCccCCCCCCceEEEEcCHHHHHHhcccc----cchHHHHHHHHHHH
Confidence 99999999999888888888777666899999999999999999999999999999997543 22345544444333
Q ss_pred HHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEeecC
Q 041113 241 MVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAGNR 320 (983)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 320 (983)
.+..... ....++++.++++.|++.+|++++|++|+++++|+...+... . ++ .++..++
T Consensus 355 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~~~~~--~--------------~~--~~~~~~~ 413 (556)
T 3hww_A 355 QAMQAVI---ARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQL--P--------------AG--YPVYSNR 413 (556)
T ss_dssp HHHHHHH---TTCCSSSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHHHCCC--C--------------TT--CCEEECC
T ss_pred HHHHHHh---hcccCcCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHHhccC--C--------------CC--ceEEecC
Confidence 3222211 124679999999999999999999999999877776655321 0 01 1134566
Q ss_pred CCCCccchHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCcccccc
Q 041113 321 GASGIDGLLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQ 400 (983)
Q Consensus 321 G~mG~~g~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~ 400 (983)
|++|++|.+|+|+|+++|.+++|||++|||||+|++|||+|+++ +++|+++||+||++|+|++++++.. ...+.
T Consensus 414 g~~g~~G~l~~A~Gaa~a~~~~vv~i~GDGsf~~~~~eL~ta~~--~~lpv~ivv~NN~~~~~~~~~~~~~----~~~~~ 487 (556)
T 3hww_A 414 GASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQ--VSAPLVLIVVNNNGGQIFSLLPTPQ----SERER 487 (556)
T ss_dssp SSCCSSSHHHHHHHHHHHHCCCEEEEEEHHHHHHTGGGHHHHTT--CSSCEEEEEEESCC--------------------
T ss_pred cccccccHHHHHHHHHhcCCCcEEEEEccHHhhhcchhhHhhcc--cCCCcEEEEEECCCCCcccCCCCcc----hhHHH
Confidence 88888777999999999988999999999999999999999998 9999999999999999998754321 11233
Q ss_pred ccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHHHHHHHHHHH
Q 041113 401 YFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATFHSMLRKFAR 467 (983)
Q Consensus 401 ~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~~~~~~~~~~ 467 (983)
++...+++||.++|++||+++++|++.+||+++|+++++.+||+||||.+++++++..++++.+.++
T Consensus 488 ~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~~~~~~~l~~~~~~~~ 554 (556)
T 3hww_A 488 FYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVS 554 (556)
T ss_dssp -CCCCCCCCSHHHHHHTTCEEECCSSHHHHHHHHHHHTTSSSEEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred hccCCCCCCHHHHHHHcCCcEEecCCHHHHHHHHHHHHhCCCCEEEEEECCccccHHHHHHHHHHhh
Confidence 4455678999999999999999999999999999999999999999999999999999999988765
No 94
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=2e-52 Score=475.64 Aligned_cols=337 Identities=14% Similarity=0.119 Sum_probs=281.5
Q ss_pred ceeEeEEEEEEEEeeCCCCCcccc-ccccCccee--eeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHh
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSY-IDHNRSRFC--REGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFM 568 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~-~~~~~~~~~--~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l 568 (983)
+|||++|+++.+++|++.||.++. +.+ .. ++.++|+|+|+ |++||||+.. .++.++|.|
T Consensus 11 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~----~~~~~~~~~V~v~td-G~~G~GE~~g-------------~i~~l~p~l 72 (392)
T 3p3b_A 11 DWKVEKIEFAKLTGERARSAGANGRIGV----HGKSCTVDIARITID-GQTGYGSSIH-------------MTPEWAEDV 72 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCC----CEEEEEEEEEEEEET-TEEEEEECCS-------------CCHHHHHTT
T ss_pred CCeEEEEEEEEEeccCCCcccccccccc----cCCCCcEEEEEEEEC-CCEEEEeccc-------------HHHHHHHHh
Confidence 489999999999999999998885 333 34 78999999999 9999999861 123577899
Q ss_pred ccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCC----CCcccccccccccee
Q 041113 569 TGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYP----LTEIDEEISKRSTSI 644 (983)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg----~~~~~~~~~~~~~~i 644 (983)
+|+++.++..++ .+..++|++|||+||||+.||.+|+|||+|||| .. .+++|
T Consensus 73 ~G~d~~~~~~~~----------------~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~~--------~~~~v 128 (392)
T 3p3b_A 73 IGRRLLDLFDDR----------------GRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAHLETG--------ASLVV 128 (392)
T ss_dssp TTCBGGGGBCTT----------------SCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC----------------CEEE
T ss_pred cCCCHHHHHHHH----------------hHHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCcccccc--------ccCCc
Confidence 999887654433 123468999999999999999999999999999 41 03679
Q ss_pred EEEEe--ecCCCCH-------HHHHHHHHHhhhcCCCEEEEeccCC-------CChHHHHHHHHHHHHHcCCCcEEEEEc
Q 041113 645 KICAL--IDSNKSP-------VEVASIATTLVEEGFTAIKLKVARR-------ADPIKDAEVIQEVRKKVGHRIELRVDA 708 (983)
Q Consensus 645 ~~~~~--~~~~~~~-------~~~~~~~~~~~~~G~~~~KiKig~~-------~~~~~d~~~v~~vr~~~g~~~~l~vDa 708 (983)
|+|++ ..+..++ +++.+.+++++++||++||+|+|.. .+++.|+++|+++|+++|+++.|++|+
T Consensus 129 p~~~s~~~~~~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDa 208 (392)
T 3p3b_A 129 PCYDTSLYFDDLHLADERAAVALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDA 208 (392)
T ss_dssp EEEEEEECBTTTTCCSHHHHHHHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred ceeEeecccCCCCcccccchHHHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 99974 2233577 8999999999999999999999841 035889999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcccCCCceeecCCC-ChHHHHHHHhh-----cCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEE
Q 041113 709 NRNWTYQEALEFGFLIKDCDLQYIEEPVQ-NEEDIIKYCEE-----SGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAI 781 (983)
Q Consensus 709 N~~~~~~~a~~~~~~l~~~~i~~iEeP~~-~~~~~~~l~~~-----~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i 781 (983)
|++||+++|+++++.|+++++.|||||++ +++.+++|+++ +++||++|| +.+..+ +..+++.+ +|++
T Consensus 209 n~~~~~~~ai~~~~~l~~~~i~~iE~P~~~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~-----~~~~i~~~~~d~v 282 (392)
T 3p3b_A 209 NNAYNLNLTKEVLAALSDVNLYWLEEAFHEDEALYEDLKEWLGQRGQNVLIADGE-GLASPH-----LIEWATRGRVDVL 282 (392)
T ss_dssp TTCCCHHHHHHHHHHTTTSCEEEEECSSSCCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTT-----HHHHHHTTSCCEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEecCCcccHHHHHHHHHhhccCCCCccEEecC-CCCHHH-----HHHHHHcCCCCEE
Confidence 99999999999999999999999999999 88999999998 899999999 999875 55555544 7999
Q ss_pred EEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccc
Q 041113 782 VIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKE 861 (983)
Q Consensus 782 ~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 861 (983)
++|++++ |++++++++++|+++|+++++| ++|+++++++++|++++++|+. . +++++. +..
T Consensus 283 ~ik~~~~-Git~~~~i~~~A~~~gi~~~~h-~~es~i~~~a~l~laa~~~~~~--~-------------~e~~~~--~~~ 343 (392)
T 3p3b_A 283 QYDIIWP-GFTHWMELGEKLDAHGLRSAPH-CYGNAYGIYASGHLSAAVRNFE--F-------------VEYDDI--TIE 343 (392)
T ss_dssp CCBTTTB-CHHHHHHHHHHHHHTTCEECCB-CCSCTHHHHHHHHHGGGCTTBC--C-------------EEECCE--EET
T ss_pred EeCcccc-CHHHHHHHHHHHHHcCCEEEec-CCCCHHHHHHHHHHHHhCCCCc--e-------------eeccch--hhH
Confidence 9999999 9999999999999999998876 9999999999999999998631 0 112222 466
Q ss_pred cCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 862 DVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 862 d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
|++.+|+.+++ +|++||||+++| ++.++++.+..
T Consensus 344 d~~~~~~~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~~~ 381 (392)
T 3p3b_A 344 GMDVSGYRIENGEIHVPATPGFGIVFD--DELVTYLINRS 381 (392)
T ss_dssp TEECTTCEEETTEEEECCSSBTSCEEC--HHHHHHHHHHT
T ss_pred hhccCCCcccCCEEECCCCCccceeEC--HHHHHhhhccc
Confidence 77778888874 899999999999 88888877643
No 95
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=2.7e-52 Score=479.22 Aligned_cols=356 Identities=14% Similarity=0.149 Sum_probs=285.1
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEee-cCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEV-APLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~-~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
|||++|+++.+++|++.+.. . . ...++|+|+|++|++||||+ .+... +...+...++.+.|.|+|+
T Consensus 3 MkI~~i~~~~~~~pl~~~~~--~-~-------~~~v~V~v~td~G~~G~Ge~~~~~g~---~~~~~~~~i~~l~p~liG~ 69 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTM--S-S-------YNPVLIRVNTDSGLSGIGEVGLAYGA---GAKAGVGIIRDLAPLIVGE 69 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGG--T-T-------CCCEEEEEEETTSCEEEEEESCSSST---THHHHHHHHHHHGGGTTTS
T ss_pred ceEEEEEEEEecccccccCc--c-c-------ccceEEEEEeCCCCEEEEeecCcCCC---ChHHHHHHHHHHHHHhCCC
Confidence 79999999999988865321 0 0 12479999999999999999 54322 2334455666789999999
Q ss_pred cccccccccccCchhhhhhhcCC--CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGI--PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
++.+++.++..+. ..... ...+..++|++|||+||||++||.+|+|||+||||.. +++||+|++
T Consensus 70 d~~~~~~i~~~l~-----~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~---------~~~vp~y~~ 135 (410)
T 2gl5_A 70 DPLNIEKIWEFFF-----RKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKT---------NEKLRTYAS 135 (410)
T ss_dssp CTTCHHHHHHHHH-----HSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTSCS---------CSSEEEEEE
T ss_pred ChHHHHHHHHHHH-----HhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCCCc---------cCceeEeEe
Confidence 9887665543221 11100 1223457899999999999999999999999999975 467999987
Q ss_pred -ec-CCC-------CHHHHHHHHHHhhhcCCCEEEEec------cCC----------------CChHHHHHHHHHHHHHc
Q 041113 650 -ID-SNK-------SPVEVASIATTLVEEGFTAIKLKV------ARR----------------ADPIKDAEVIQEVRKKV 698 (983)
Q Consensus 650 -~~-~~~-------~~~~~~~~~~~~~~~G~~~~KiKi------g~~----------------~~~~~d~~~v~~vr~~~ 698 (983)
+. +.. +++++.+.+++++++||++||+|+ |.. .+++.|+++|++||+++
T Consensus 136 ~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~ 215 (410)
T 2gl5_A 136 QLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM 215 (410)
T ss_dssp CGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc
Confidence 64 213 899999999999999999999997 420 03577999999999999
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC
Q 041113 699 GHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP 776 (983)
Q Consensus 699 g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~ 776 (983)
|+++.|++|+|++|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+.. .+..+++.
T Consensus 216 G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~ 290 (410)
T 2gl5_A 216 GDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRW-----GYRELLEK 290 (410)
T ss_dssp CSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTH-----HHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHH-----HHHHHHHc
Confidence 999999999999999999999999999999999999998 78999999999999999999999875 36666654
Q ss_pred -CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccc
Q 041113 777 -GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGT 855 (983)
Q Consensus 777 -~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~ 855 (983)
.+|++++|++++||++++++++++|+++|+++++|++ +|+|++++++|++++++|+. . .+.. ...
T Consensus 291 ~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~-~s~i~~aa~~hlaaa~~~~~--~---~e~~-------~~~- 356 (410)
T 2gl5_A 291 QSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC-GGPVSTVAALHMETAIPNFI--I---HEHH-------TNA- 356 (410)
T ss_dssp TCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC-SSHHHHHHHHHHHHHCTTBC--C---EEEE-------TTT-
T ss_pred CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC-CCHHHHHHHHHHHHhCCcce--e---eeec-------ccc-
Confidence 4799999999999999999999999999999888776 69999999999999999641 1 0100 000
Q ss_pred hhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhcccc
Q 041113 856 YQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 856 ~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
...+..|++.+|+.+++ +|++||||+++| ++.++++.+.
T Consensus 357 ~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~~ 399 (410)
T 2gl5_A 357 MKASIRELCTHDYQPENGYYVAPEQPGLGQELN--DEVVKEYLAY 399 (410)
T ss_dssp TCHHHHTTBSSCCCCBTTEECCCCSSBTSCCBC--HHHHTTTEEE
T ss_pred ccchHHHhccCCceecCCEEECCCCCcCCcccC--HHHHHhcccc
Confidence 11235677777888874 899999999999 8887776643
No 96
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=100.00 E-value=6e-53 Score=508.06 Aligned_cols=396 Identities=11% Similarity=0.100 Sum_probs=316.7
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.|++||+.|.+ ++|||||+||.|++..+.... ..+........ .+.+.++++.+++++
T Consensus 145 ~~~~~i~~A~~~A~~-~~GPV~l~iP~dv~~~~~~~~---------------~~~~~~~~~~~--~~~~~~~~~~i~~~~ 206 (603)
T 4feg_A 145 TLPHVIDEAIRRAYA-HQGVAVVQIPVDLPWQQIPAE---------------DWYASANSYQT--PLLPEPDVQAVTRLT 206 (603)
T ss_dssp THHHHHHHHHHHHHH-HTSEEEEEEETTGGGSEEETT---------------TCCCCGGGCCC--CCCCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-CCCCEEEEeChhhhhccCCcc---------------cccccccccCC--CCCCCCCHHHHHHHH
Confidence 478999999999998 689999999999765432110 00000000000 012356778899999
Q ss_pred HHHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCC
Q 041113 81 ELVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQ 160 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~ 160 (983)
++|++||||+|++|+|+ .++.+++.+|||++++||++|++ | ||+||++||++ +|.+|..++..++..+++
T Consensus 207 ~~l~~A~rPvIl~G~g~-~~a~~~l~~lae~~~~PV~~t~~-g------kg~~~~~hp~~--~G~~g~~~~~~~~~~l~~ 276 (603)
T 4feg_A 207 QTLLAAERPLIYYGIGA-RKAGKELEQLSKTLKIPLMSTYP-A------KGIVADRYPAY--LGSANRVAQKPANEALAQ 276 (603)
T ss_dssp HHHHHCSSEEEEECGGG-TTCHHHHHHHHHHHTCCEEECGG-G------TTSSCTTCTTB--CCCCSSSSCHHHHHHHHH
T ss_pred HHHhcCCCeEEEECCCc-hhHHHHHHHHHHHHCCCEEEcCc-c------ccCCCCCChhh--cccCcccCcHHHHHHHHh
Confidence 99999999999999998 45678999999999999999998 5 89999999995 788888777777778899
Q ss_pred CCEEEEeCCccccHHHHHHHHhcCC-ceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECFP-CTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRALD 239 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~~ 239 (983)
||+||+||++++. ..|...+.+ .++||||+|+.++++++.+++.+++|++.+|++|.+.+.......|.+.+.+..
T Consensus 277 aDlvl~iG~~~~~---~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~~~~~~~~~~~~~~~~ 353 (603)
T 4feg_A 277 ADVVLFVGNNYPF---AEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSERESTPWWQANLANV 353 (603)
T ss_dssp CSEEEEESCCCTT---TTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTCCCCCCCHHHHHHHHHH
T ss_pred CCEEEEECCCCCc---ccccccCCCCCeEEEEeCCHHHhCCccCCCEEEEeCHHHHHHHHHHhhhccCChHHHHHHHHHH
Confidence 9999999999963 223333443 579999999999999999999999999999999999876655567887776555
Q ss_pred HHHHHHHHhhh-cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 240 MMVASEISFQI-CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 240 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
+.+........ ..+.++++..+++.|.+.++++++++.|.|+ +.+|..+++.+ ..|++|+ .++
T Consensus 354 ~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~~ivv~d~G~----~~~~~~~~~~~-~~~~~~~-----------~~~ 417 (603)
T 4feg_A 354 KNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGD----INLNANRHLKL-TPSNRHI-----------TSN 417 (603)
T ss_dssp HHHHHHHHHHHTCCSSBCCHHHHHHHHHHHCCTTCEEEECSSH----HHHHHHHHCCC-CTTCEEE-----------CCC
T ss_pred HHHHHHhhhhhcCCCCCcCHHHHHHHHHHhCCCCCEEEECCch----HHHHHHHhcee-CCCCcee-----------cCc
Confidence 55444332211 2356799999999999999999999999998 66676665553 4444443 356
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|++++. +++||+++|||||+|+++||+|+++ +++|+++||+||++|++++..+. ..
T Consensus 418 ~~g~~G~--~l~~A~Gaala~~~~~vv~~~GDG~~~~~~~~l~~a~~--~~lp~~~vv~nN~~~~~~~~~~~------~~ 487 (603)
T 4feg_A 418 LFATMGV--GIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQ--YHLPVINVVFTNCQYGFIKDEQE------DT 487 (603)
T ss_dssp SSCCTTC--HHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEECSBCHHHHHHHH------HH
T ss_pred ccccccc--hhHHHhhHHHhCCCCcEEEEeccHHHhhhHHHHHHHHH--HCcCeEEEEEECCchHHHHHHHH------Hh
Confidence 7899999 999999999999 8999999999999999999999999 99999999999999999765311 11
Q ss_pred ccc-ccccC-CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh--ccCCCEEEEEEcCcc
Q 041113 398 LDQ-YFYTT-HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQ--HLGTDRVIEVESCID 453 (983)
Q Consensus 398 ~~~-~~~~~-~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~--~~~~p~lIeV~~~~~ 453 (983)
+.. .+.+. +.+||.++|++||+++++|++.++|+++|++++ +.+||+||||.+++.
T Consensus 488 ~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~~~gP~lIev~~~~~ 547 (603)
T 4feg_A 488 NQNDFIGVEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITGD 547 (603)
T ss_dssp CSSCCCSSBCCCCCHHHHHHHTTCEEEEECBGGGHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred cCCCcccCcCCCCCHHHHHHHCCCeEEEECCHHHHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 122 33333 578999999999999999999999999999999 889999999999764
No 97
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=100.00 E-value=6.1e-53 Score=504.68 Aligned_cols=396 Identities=13% Similarity=0.112 Sum_probs=312.5
Q ss_pred HHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHHH
Q 041113 2 ILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVLE 81 (983)
Q Consensus 2 i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (983)
+++.+++|++.|.++|||||||+||+|.+..+... ...+.... . +.+.++.+.++++++
T Consensus 144 ~~~~i~~A~~~A~~~r~GPV~l~iP~dv~~~~~~~---------------~~~~~~~~---~---~~~~~~~~~i~~~~~ 202 (566)
T 1ozh_A 144 LAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVSG---------------KVLPASGA---P---QMGAAPDDAIDQVAK 202 (566)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEEEEHHHHHSCEEE---------------CCCCCCCS---C---EECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEeChhhhhccccc---------------cccccccc---c---CCCCCCHHHHHHHHH
Confidence 67899999999999999999999999842111100 00000000 0 012345678999999
Q ss_pred HHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhcc-ccccccchhhhccCccccccC
Q 041113 82 LVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQ-NILFLDHLDHALLSESVKDWI 159 (983)
Q Consensus 82 ~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp-~~~~~g~~g~~~~~~~~~~~~ 159 (983)
+|++||||+|++|+++. .++.+++.+|||++|+||++|++ + ||.+|++|| ++ +|.+|..++..++..++
T Consensus 203 ~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------kg~~~~~~p~~~--~G~~g~~~~~~~~~~l~ 273 (566)
T 1ozh_A 203 LIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQ-A------AGAVNQDNFSRF--AGRVGLFNNQAGDRLLQ 273 (566)
T ss_dssp HHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGG-G------TTTCCTTTCTTE--EEECSSBTTCHHHHHHH
T ss_pred HHHcCCCeEEEECCCcccccHHHHHHHHHHHHCCCEEEccc-c------CCcCCCCChHhh--cCCCcccCCHHHHHHHH
Confidence 99999999999999975 55678999999999999999998 5 799999999 85 78888777766777888
Q ss_pred CCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCC-ChhHHHHHHHH
Q 041113 160 QFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHR-SSKWCSFLRAL 238 (983)
Q Consensus 160 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~-~~~w~~~~~~~ 238 (983)
+||+||++|+.+.+..+..|. ..+.++||||.|+.+++++++.++.+.+|++.++++|.+.+.... ...|.+++...
T Consensus 274 ~aDlvl~lG~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~w~~~~~~~ 351 (566)
T 1ozh_A 274 LADLVICIGYSPVEYEPAMWN--SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNIDHRLVLSPQAAEILRD 351 (566)
T ss_dssp HCSEEEEESCCGGGSCGGGTC--CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTCCSCCCCCHHHHHHHHH
T ss_pred hCCEEEEECCCCCcCCccccC--CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhccccCCcHHHHHHHHHH
Confidence 999999999976443333232 124579999999999999999999999999999999998765432 35688777655
Q ss_pred HHHHHHHHHhhh-cccCC-CCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeE
Q 041113 239 DMMVASEISFQI-CADYS-LTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRV 316 (983)
Q Consensus 239 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 316 (983)
++.......... ..+.+ +++..+++.|.+.++++++++.|+|+ +.+|..+++.. ..|++|+ .
T Consensus 352 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~l~~~l~~~~iv~~d~G~----~~~~~~~~~~~-~~~~~~~-----------~ 415 (566)
T 1ozh_A 352 RQHQRELLDRRGAQLNQFALHPLRIVRAMQDIVNSDVTLTVDMGS----FHIWIARYLYT-FRARQVM-----------I 415 (566)
T ss_dssp HHHHHHHHHC-CCCCCCSSBCHHHHHHHHHHHCCTTEEEEECSSH----HHHHHHHTGGG-CCCSEEE-----------C
T ss_pred HHHhHhhhhhccccCCCCCcCHHHHHHHHHHhCCCCCEEEEcCcH----HHHHHHHhccc-CCCCeEE-----------e
Confidence 544332221111 12345 99999999999999999999999998 55666555543 4454444 3
Q ss_pred eecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCc
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEP 395 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~ 395 (983)
+.++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|++++.++.
T Consensus 416 ~~g~g~mG~--~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~ta~~--~~l~~~ivv~nN~~~~~~~~~~~------ 485 (566)
T 1ozh_A 416 SNGQQTMGV--ALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELETAVR--LKANVLHLIWVDNGYNMVAIQEE------ 485 (566)
T ss_dssp CCTTCCTTC--HHHHHHHHHHHSTTSEEEEEEEHHHHHHHTTHHHHHHH--HTCCEEEEEEECSBCHHHHHHHH------
T ss_pred CCCcccccc--hHHHHHHHHHhCCCCCEEEEEcChHHhccHHHHHHHHH--hCCCcEEEEEECCchhHHHHHHH------
Confidence 467899999 999999999998 8999999999999999999999999 99999999999999999976421
Q ss_pred ccccccc-ccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccc
Q 041113 396 RILDQYF-YTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDAN 455 (983)
Q Consensus 396 ~~~~~~~-~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~ 455 (983)
..++..+ .+..++||.++|++||+++++|++.+||+++|+++++.++|.||||.+++.++
T Consensus 486 ~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~liev~~~~~~~ 546 (566)
T 1ozh_A 486 KKYQRLSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAMDVDGPAVVAIPVDYRDN 546 (566)
T ss_dssp HHHSSCCSCBCCCCCHHHHHHTTTSEEEECCSGGGHHHHHHHHHHSSSCEEEEEEBCCTTH
T ss_pred HhcCCCccCcCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEEeCCCcC
Confidence 1122222 23456999999999999999999999999999999988999999999999876
No 98
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=100.00 E-value=3.1e-53 Score=510.19 Aligned_cols=403 Identities=16% Similarity=0.189 Sum_probs=310.1
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++++++|++.|.++|||||||+||.|++..+.... |. .......... . ..+.++++.+++++
T Consensus 145 ~i~~~l~~A~~~a~~~~~GPV~l~iP~dv~~~~~~~~-----------~~-~~~~~~~~~~-~---~~~~~~~~~i~~~~ 208 (590)
T 1ybh_A 145 DIPRIIEEAFFLATSGRPGPVLVDVPKDIQQQLAIPN-----------WE-QAMRLPGYMS-R---MPKPPEDSHLEQIV 208 (590)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEEEEHHHHHCEECCC-----------TT-CCCCCHHHHH-H---SCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCcchhhhhcccc-----------cc-cccccccCCC-C---CCCCCCHHHHHHHH
Confidence 3788999999999999999999999999643321000 00 0001111000 0 11224667899999
Q ss_pred HHHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCC
Q 041113 81 ELVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQ 160 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~ 160 (983)
++|.+||||+|++|+++.... +++.+|||++|+||++|++ | ||+||++||++ +|.+|..++..++..+.+
T Consensus 209 ~~l~~a~rpvIl~G~g~~~~~-~~l~~lae~~~~Pv~~t~~-g------~g~~~~~hp~~--~G~~g~~~~~~~~~~l~~ 278 (590)
T 1ybh_A 209 RLISESKKPVLYVGGGCLNSS-DELGRFVELTGIPVASTLM-G------LGSYPADDELS--LHMLGMHGTVYANYAVEH 278 (590)
T ss_dssp HHHHHCSSEEEEECGGGTTCH-HHHHHHHHHHCCCEEECTT-T------TTSSCTTSTTE--EEECSTTSCHHHHHHHHH
T ss_pred HHHHhCCCcEEEECcccccCH-HHHHHHHHHhCCCEEEchh-h------cCcCCCCCchh--cCCcccccCHHHHHHHHh
Confidence 999999999999999987544 8999999999999999997 6 89999999995 688887776666777899
Q ss_pred CCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCC------CChhHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPH------RSSKWCS 233 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~------~~~~w~~ 233 (983)
||+||+||+++++..+ ++...+. ..++||||+|+.+++++++.++.+.+|++.+|++|.+.+... ....|.+
T Consensus 279 aDlvl~iG~~~~~~~~-~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~~~~~~~~ 357 (590)
T 1ybh_A 279 SDLLLAFGVRFDDRVT-GKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKVLENRAEELKLDFGVWRN 357 (590)
T ss_dssp CSEEEEESCCCCHHHH-SSGGGTTTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHHHHHTHHHHCCCCHHHHH
T ss_pred CCEEEEEcCCCCcccc-CcccccCCCCeEEEEECCHHHhCCCcCCCeEEecCHHHHHHHHHHhhhccccccccchHHHHH
Confidence 9999999999975444 3333343 457999999999999999999999999999999998765321 1245655
Q ss_pred HHHHHHHHHHHHHHhhh-cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCc
Q 041113 234 FLRALDMMVASEISFQI-CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQ 312 (983)
Q Consensus 234 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 312 (983)
.+...+.. ..... ....++++..+++.|++.+|++++++.|.|+ +.+|..+++.+ ++|++|+.
T Consensus 358 ~~~~~~~~----~~~~~~~~~~~l~~~~~~~~l~~~lp~~~ivv~d~G~----~~~~~~~~~~~-~~~~~~~~------- 421 (590)
T 1ybh_A 358 ELNVQKQK----FPLSFKTFGEAIPPQYAIKVLDELTDGKAIISTGVGQ----HQMWAAQFYNY-KKPRQWLS------- 421 (590)
T ss_dssp HHHHHHHH----SCCCCCCCTTBCCHHHHHHHHHHHTTTCCEEEECSSH----HHHHHHHSCCC-SSTTSEEC-------
T ss_pred HHHHHHHh----hhhhcccccCCcCHHHHHHHHHHhCCCCCEEEEcCcH----HHHHHHHhccc-CCCCeEEe-------
Confidence 44333221 11111 1234689999999999999999999999998 66677666654 55555543
Q ss_pred ceeEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCC
Q 041113 313 WIRVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIAD 391 (983)
Q Consensus 313 ~~~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~ 391 (983)
.+++|+||+ ++|+|+|+++|. +++||+++|||+|+|++|||+|+++ +++|+++||+||++|+|++.++...
T Consensus 422 ----~g~~G~~G~--~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~ta~~--~~l~~~ivv~NN~~~~~~~~~~~~~ 493 (590)
T 1ybh_A 422 ----SGGLGAMGF--GLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRV--ENLPVKVLLLNNQHLGMVMQWEDRF 493 (590)
T ss_dssp ----CCSSCCTTC--HHHHHHHHHHHCTTSCEEEEEEHHHHHHTTTHHHHHHH--TTCCEEEEEEECSBCHHHHHHHHHH
T ss_pred ----CCCcccccc--hHHHHHHHHHhCCCCcEEEEEccchhhccHHHHHHHHH--hCCCcEEEEEECCcchHHHHHHHHh
Confidence 477899999 999999999998 8999999999999999999999999 9999999999999999987532100
Q ss_pred CCCccccccccccC-----CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccc
Q 041113 392 RTEPRILDQYFYTT-----HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDAN 455 (983)
Q Consensus 392 ~~~~~~~~~~~~~~-----~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~ 455 (983)
.. .......+..+ .++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++.++
T Consensus 494 ~~-~~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~liev~~~~~~~ 561 (590)
T 1ybh_A 494 YK-ANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEH 561 (590)
T ss_dssp ST-TCCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEECBHHHHHHHHHHHHHSSSCEEEEEECCTTCC
T ss_pred cC-CccccccccccccccCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 00 00001111121 26899999999999999999999999999999988999999999998764
No 99
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.7e-53 Score=484.08 Aligned_cols=354 Identities=19% Similarity=0.187 Sum_probs=287.7
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHH--HHHHHHH-HHHhHhc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLL--DAEEQLR-FLLHFMT 569 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~--~~~~~l~-~~~~~l~ 569 (983)
|||++|+++.+++|++.||.++. ++.++|+|+|+ |++||||+.+.++..++.. .+...++ .++|.|+
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~---------~~~~~V~v~td-G~~G~GE~~~~~~~~~~~~~~~~~~~i~~~l~~~l~ 72 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGS---------QDALLVRVAAG-GHIGWGECEAAPLPSIAAFVCPKSHGVCRPVSDSVL 72 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGG---------GEEEEEEEEET-TEEEEEEECSCHHHHHHHHHCCCSBTTBCCGGGGTT
T ss_pred CEEEEEEEEEEeccCCCcccccc---------ceEEEEEEEeC-CcEEEEeeecccCCcccchhHHHHHHHHHHHHHHhC
Confidence 89999999999999999998765 56899999999 9999999987642223221 1222344 3778899
Q ss_pred cCcccccccccccCchhhhh-hhcCCCCCcchhh--HHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEE
Q 041113 570 GAKISYFLPLLKGSFSSWIW-STLGIPACEIFPS--VRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKI 646 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~ 646 (983)
|+ +.++...+.. ...+ ...+ ....++ |++|||+||||+.||.+|+|||+||||.. +++||+
T Consensus 73 G~-~~~~~~~l~~---~~~~~~~~g---~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~---------~~~vp~ 136 (401)
T 2hzg_A 73 GQ-RLDGPDDIAR---IAALVGYNS---MDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLGYSA---------SHGKRP 136 (401)
T ss_dssp TC-BCSSHHHHHH---HHHHHHHHT---TTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSC---------CCCBEE
T ss_pred CC-CCCHHHHHHH---HHHhhccCC---ccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCC---------CCceEe
Confidence 98 6654321110 0000 0011 013567 99999999999999999999999999975 467999
Q ss_pred EEeecCCCCHHHHHHHHHHhhhcCCCEEEEe---ccCCCCh-HHHHHHHHHHHHHcCCCcEEEEEcCCCC--CHHHHHHH
Q 041113 647 CALIDSNKSPVEVASIATTLVEEGFTAIKLK---VARRADP-IKDAEVIQEVRKKVGHRIELRVDANRNW--TYQEALEF 720 (983)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiK---ig~~~~~-~~d~~~v~~vr~~~g~~~~l~vDaN~~~--~~~~a~~~ 720 (983)
|+++....+++++.+.+++++++||++||+| +|. ++ +.|+++|++||+++|+++.|++|+|++| |.++|+++
T Consensus 137 ~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~spvG~--~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~ 214 (401)
T 2hzg_A 137 YASLLFGDTPQETLERARAARRDGFAAVKFGWGPIGR--GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAAR 214 (401)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHTTCSEEEEESTTTTS--SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTT
T ss_pred eEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcCCCCCC--CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHH
Confidence 9876545689999999999999999999999 986 67 8999999999999999999999999999 99999999
Q ss_pred HhhcccCCCceeecCCC--ChHHHHHHHh-hcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHH
Q 041113 721 GFLIKDCDLQYIEEPVQ--NEEDIIKYCE-ESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGL 796 (983)
Q Consensus 721 ~~~l~~~~i~~iEeP~~--~~~~~~~l~~-~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~ 796 (983)
++.|+++++.|||||++ +++.+++|++ ++++||++||++.+.. .+..+++ ..+|++++|++++||++++++
T Consensus 215 ~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~-----~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (401)
T 2hzg_A 215 LPTLDAAGVLWLEEPFDAGALAAHAALAGRGARVRIAGGEAAHNFH-----MAQHLMDYGRIGFIQIDCGRIGGLGPAKR 289 (401)
T ss_dssp HHHHHHTTCSEEECCSCTTCHHHHHHHHTTCCSSEEEECTTCSSHH-----HHHHHHHHSCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHHhcCCCEEECCCCccCHHHHHHHHhhCCCCCEEecCCcCCHH-----HHHHHHHCCCCCEEEeCcchhCCHHHHHH
Confidence 99999999999999998 7889999999 8999999999999865 3555554 457999999999999999999
Q ss_pred HHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee-c---
Q 041113 797 IARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC-H--- 872 (983)
Q Consensus 797 ~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~-~--- 872 (983)
++++|+++|++++.| ++||++++++++|++++++|.. . .+++ ..+ .. +.+|++.+|+.++ +
T Consensus 290 i~~~A~~~g~~~~~h-~~es~i~~~a~~hlaaa~~~~~--~---~e~~------~~~--~~-~~~d~~~~~~~~~~~G~~ 354 (401)
T 2hzg_A 290 VADAAQARGITYVNH-TFTSHLALSASLQPFAGLEADR--I---CEYP------AAP--QQ-LALDITGDHIRPDAEGLI 354 (401)
T ss_dssp HHHHHHHHTCEEEEC-CCSCHHHHHHHHGGGTTCTTCC--E---EEEE------SSC--CH-HHHHTBSSCCCCCTTSCB
T ss_pred HHHHHHHcCCEEecC-CCCcHHHHHHHHHHHHhCCCce--e---eecc------CCc--ch-HHHHhccCCceeccCCeE
Confidence 999999999998866 9999999999999999998631 1 1111 111 12 4677877888877 4
Q ss_pred -cCCCCeeeEEecchhhhhhhcccc
Q 041113 873 -NSCRGFVEASVAKATHILQNLQIN 896 (983)
Q Consensus 873 -~P~~pGlGv~~d~a~~~~~~~~~~ 896 (983)
+|++||||+++| ++.++++.+.
T Consensus 355 ~~p~~PGlGv~~d--~~~l~~~~~~ 377 (401)
T 2hzg_A 355 RAPEAPGLGLQVA--ASALRRYLVE 377 (401)
T ss_dssp CSCSSSBTSCCBC--HHHHHHHBCC
T ss_pred ECCCCCcCCceEC--HHHHHhhhcc
Confidence 899999999999 8888887754
No 100
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=3.9e-52 Score=477.04 Aligned_cols=351 Identities=16% Similarity=0.139 Sum_probs=281.8
Q ss_pred ccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhc
Q 041113 490 LSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 490 ~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~ 569 (983)
|..|||++|+++.+. |+ . + .++|+|+|++| +||||+ +.. .+...+...++.+.|.|+
T Consensus 3 ~~~MkI~~i~~~~~~-~~--------~--------~-~v~V~v~td~G-~G~Ge~-~~g---~~~~~~~~~i~~l~p~li 59 (410)
T 2qq6_A 3 LSAPRITRVETAAIR-AV--------G--------P-SVLVRVWAGDE-HGLGEC-YPS---APAAGIHHIVMNMEEQLL 59 (410)
T ss_dssp -CCCCCCEEEEEEEC-CC-----------------C-EEEEEEEETTE-EEEEEE-CCC---SCHHHHHHHHHTTHHHHT
T ss_pred CCCceEeEEEEEEEC-CC--------C--------C-EEEEEEEECCc-EEEEEe-cCC---CChHHHHHHHHHHHHHhC
Confidence 455899999999885 22 0 1 48999999999 999999 532 233445566667899999
Q ss_pred cCcccccccccccCchhhhhhhc-CC-CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEE
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTL-GI-PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKIC 647 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~ 647 (983)
|+++.+++.++..+. ... +. ...+...+|++|||+||||++||.+|+|||+||||.. +++||+|
T Consensus 60 G~d~~~~~~i~~~l~-----~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~---------~~~vp~y 125 (410)
T 2qq6_A 60 GEDPRDVERLYEKMR-----RWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGGAF---------RRRVRLY 125 (410)
T ss_dssp TCCTTCHHHHHHHHH-----HHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTTCCS---------CSEEEEE
T ss_pred CCCccHHHHHHHHHH-----HhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCc---------cCceeEE
Confidence 999887665543221 111 10 1234467899999999999999999999999999975 4789999
Q ss_pred EeecCC-C---------------CHHHHHHHHHHhhhcCCCEEEEec----cCC-----------CChHHHHHHHHHHHH
Q 041113 648 ALIDSN-K---------------SPVEVASIATTLVEEGFTAIKLKV----ARR-----------ADPIKDAEVIQEVRK 696 (983)
Q Consensus 648 ~~~~~~-~---------------~~~~~~~~~~~~~~~G~~~~KiKi----g~~-----------~~~~~d~~~v~~vr~ 696 (983)
+++..+ . +++++.+.+++++++||++||+|+ |.. .+++.|+++|++||+
T Consensus 126 ~~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRe 205 (410)
T 2qq6_A 126 ADCNAGTVDAAAHHIEGGLFEEGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVRE 205 (410)
T ss_dssp EECCCSEECTTCCEEECCTTCSTHHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHH
Confidence 876311 2 789999999999999999999999 531 035789999999999
Q ss_pred HcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhc
Q 041113 697 KVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYA 774 (983)
Q Consensus 697 ~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~ 774 (983)
++|+++.|++|+|++||+++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+.. .+..++
T Consensus 206 a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i 280 (410)
T 2qq6_A 206 AVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEEPTPPENLDALAEVRRSTSTPICAGENVYTRF-----DFRELF 280 (410)
T ss_dssp HHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEECTTCCSHH-----HHHHHH
T ss_pred hcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEECCCChhhHHHHHHHHhhCCCCEEeCCCcCCHH-----HHHHHH
Confidence 99999999999999999999999999999999999999998 78899999999999999999999865 366666
Q ss_pred CC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCc
Q 041113 775 HP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGL 853 (983)
Q Consensus 775 ~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~ 853 (983)
+. .+|++++|++++||++++++++++|+++|+++++|++ .++|++++++|++++++|+. . .++ . ..
T Consensus 281 ~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~-~s~i~~aa~~hlaaa~~~~~--~---~e~--~-----~~ 347 (410)
T 2qq6_A 281 AKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNV-SSPVGTVAAAHVCAAVSNFA--V---LEW--H-----AI 347 (410)
T ss_dssp HTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCC-SCHHHHHHHHHHHHSCTTBC--C---EEE--C-----CT
T ss_pred HcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC-CcHHHHHHHHHHHHhCCCce--e---eec--c-----cc
Confidence 54 4799999999999999999999999999999888776 59999999999999999641 1 111 0 01
Q ss_pred cchhcccccCCC--CCceeec----cCCCCeeeEEecchhhhhhhccccccc
Q 041113 854 GTYQWLKEDVTT--DPISICH----NSCRGFVEASVAKATHILQNLQINNDV 899 (983)
Q Consensus 854 ~~~~~~~~d~~~--~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~~~ 899 (983)
+ ..+..|++. +|+.+++ +|++||||+++| ++.++++.+....
T Consensus 348 ~--~~~~~d~~~~~~~~~~~~G~i~~p~~PGlGv~~d--~~~l~~~~~~~~~ 395 (410)
T 2qq6_A 348 D--MPHWEDFVRYPGGPVIREGHIELTEEPGLGLELD--EEAAFEHRHEKGG 395 (410)
T ss_dssp T--CTTGGGGBCCSSSSSEETTEEECCSSSGGGCCBC--HHHHHTTBCC--C
T ss_pred c--chhhhhhcccCCCceeeCCEEECCCCCCCCceeC--HHHHHhccccCcc
Confidence 1 123457776 7888874 899999999999 8888888765433
No 101
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=7.8e-52 Score=470.78 Aligned_cols=353 Identities=15% Similarity=0.117 Sum_probs=285.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHH-HHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRF-LLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~-~~~~l~g~ 571 (983)
|||++|+++.+++||+.||.++.+.+ ..++.++|+|+|++|++||||+.+...+..+.+.+...++. +.|.++|+
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~v~V~v~td~G~~G~GE~~~~g~~~~~~~~~~~~i~~~l~p~l~G~ 78 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRA----DDVNVAALELVSESGEVGLGFIQTLFNPLPDQQEIESVFEHEVWPSLKGN 78 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTSCEEEEEEEESSSCCCCHHHHHHHHHHHTHHHHTTS
T ss_pred CEEEEEEEEEEEeccCCceeccccee----cccceEEEEEEECCCCEEEEEeccCCCccccHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999887654 34899999999999999999998743210012334455554 78999999
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
++.++ +..... ...+. .....++|++|||+||||++||.+|+|||+||||.+ ++||+|++.+
T Consensus 79 d~~~~---~~~~~~----~~~~~-~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLGg~~----------~~vp~y~~~~ 140 (389)
T 2oz8_A 79 RAIAL---VHRVNR----PRGGN-QRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLGSRR----------NRVKAYASGL 140 (389)
T ss_dssp CHHHH---TTCCCC----CC-------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTTCSC----------SEEEEEEECC
T ss_pred CHHHH---HHHHhc----cCCCc-cchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCC----------CceEEEEeCC
Confidence 87754 111000 00000 001146799999999999999999999999999975 6799998753
Q ss_pred C-CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc--CC
Q 041113 652 S-NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD--CD 728 (983)
Q Consensus 652 ~-~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~--~~ 728 (983)
. ..+++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++||.++|+++++.|++ ++
T Consensus 141 ~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~-~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~ 219 (389)
T 2oz8_A 141 DFHLDDDAFVSLFSHAASIGYSAFKIKVGH-RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHD 219 (389)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEEECCC-SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCC
T ss_pred CcCCCHHHHHHHHHHHHHhCCCEEEEccCC-CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 2 2389999999999999999999999996 378999999999999999999999999999999999999999999 99
Q ss_pred CceeecCCC--ChHHHHHHHhhc-CCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEES-GLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
+.|||||++ +++.+++|++++ ++||++||++ +.. .+..+++.+ +|++++| ||++++++++++|+++
T Consensus 220 i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~-----~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~ 289 (389)
T 2oz8_A 220 LLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYL-DLQ-----GKRLLLEAHAADILNVH----GQVTDVMRIGWLAAEL 289 (389)
T ss_dssp CSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTC-CHH-----HHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHH-----HHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHc
Confidence 999999998 788999999999 9999999999 875 356666544 7999999 9999999999999999
Q ss_pred CCcEEeC-CCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCee
Q 041113 805 GKMAVVS-AAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFV 879 (983)
Q Consensus 805 gi~~~~~-~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGl 879 (983)
|+++++| ++.+ +++|++++++|+. . . +...++..|++.+|+.+++ +|++|||
T Consensus 290 gi~~~~~~~~~e------a~lhlaaa~~~~~--~---~------------e~~~~~~~~~~~~~~~~~~G~~~~p~~PGl 346 (389)
T 2oz8_A 290 GIPISIGNTFLE------AGVHMAVALPEVE--W---L------------EYSFQNFDHLVEQPIEIRDGYAYAPDRPGH 346 (389)
T ss_dssp TCCEEECCCGGG------TTHHHHHHSTTEE--E---E------------EECCCSCGGGBSSCCCEETTEEECCSSSBT
T ss_pred CCeEeecccHHH------HHHHHHhcCCCCc--e---e------------ecchHHHhhhccCCceEECCEEECCCCCcC
Confidence 9999999 6655 8899999998631 1 0 0112345677778888874 8999999
Q ss_pred eEEecchhhhhhhccccccccccc
Q 041113 880 EASVAKATHILQNLQINNDVICKT 903 (983)
Q Consensus 880 Gv~~d~a~~~~~~~~~~~~~i~~~ 903 (983)
|+++| ++.++++.+.....+..
T Consensus 347 Gv~~d--~~~l~~~~~~~~~~~~~ 368 (389)
T 2oz8_A 347 GLVLS--EKARGEWSRPRRLARSE 368 (389)
T ss_dssp SCCBC--HHHHHHSBCCSCCCGGG
T ss_pred CCccC--HHHHHhhccccccccee
Confidence 99999 88999988776555443
No 102
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=7.7e-52 Score=474.32 Aligned_cols=351 Identities=15% Similarity=0.134 Sum_probs=280.8
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEee-cCcCcCcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEV-APLEIHKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~-~~~~~~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
|||++|+++.+..|...| ...++|+|+|++|++||||+ .+... +...+...++.+.|.|+|+
T Consensus 3 MkI~~i~~~~~~~~~~~~--------------~~~v~V~v~td~G~~G~Ge~~~~~g~---~~~~~~~~i~~l~p~l~G~ 65 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSG--------------QRPILVKVSTDEGIYGLGEAGIAYGV---GGSAAAGILKDYAALLIGE 65 (403)
T ss_dssp CCEEEEEEEEECCCTTTC--------------CCCEEEEEEETTSCEEEEEESCSSSS---CHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEEEEecCCCCCC--------------ccceEEEEEeCCCCEEEEeecCCCCC---chHHHHHHHHHHHHHcCCC
Confidence 799999999986531111 12479999999999999999 54322 2334555666799999999
Q ss_pred cccccccccccCchhhhhhhcCC--CCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGI--PACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
++.+++.++..+. ..... ...+...+|++|||+||||++||.+|+|||+||||.. +++||+|++
T Consensus 66 d~~~~~~i~~~l~-----~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~---------~~~vp~y~~ 131 (403)
T 2ox4_A 66 DPFNTEAIWEKLF-----KKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLGGKN---------REDLRVYAS 131 (403)
T ss_dssp CTTCHHHHHHHHH-----HSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCS---------SSSEEEEEE
T ss_pred CHHHHHHHHHHHH-----HhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcCCCC---------CCceeeeEe
Confidence 9887655543221 11100 1223457899999999999999999999999999975 467999987
Q ss_pred -ec-CCC-------CHHHHHHHHHHhhhcCCCEEEEec------cCC-----------CChHHHHHHHHHHHHHcCCCcE
Q 041113 650 -ID-SNK-------SPVEVASIATTLVEEGFTAIKLKV------ARR-----------ADPIKDAEVIQEVRKKVGHRIE 703 (983)
Q Consensus 650 -~~-~~~-------~~~~~~~~~~~~~~~G~~~~KiKi------g~~-----------~~~~~d~~~v~~vr~~~g~~~~ 703 (983)
+. +.. +++++.+.+++++++||+++|+|+ |.. .+++.|+++|++||+++|+++.
T Consensus 132 ~i~~g~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~ 211 (403)
T 2ox4_A 132 QLQFGWGKERKSKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVD 211 (403)
T ss_dssp CGGGCSSSSCCCCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred eccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCe
Confidence 64 213 899999999999999999999997 420 0357799999999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-CceE
Q 041113 704 LRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-GIVA 780 (983)
Q Consensus 704 l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~ 780 (983)
|++|+|++|++++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+.. .+..+++. .+|+
T Consensus 212 l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~-----~~~~~i~~~~~d~ 286 (403)
T 2ox4_A 212 IIVENHGHTDLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYSRW-----GFLPFLEDRSIDV 286 (403)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCHHH-----HHHHHHHTTCCSE
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCCHH-----HHHHHHHcCCCCE
Confidence 9999999999999999999999999999999998 78999999999999999999999864 36666654 4799
Q ss_pred EEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccc
Q 041113 781 IVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLK 860 (983)
Q Consensus 781 i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 860 (983)
+++|++++||++++++++++|+++|+++++|++ +|+|++++++|++++++|+. . .++ ... ....+.
T Consensus 287 v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~-~s~i~~aa~~hlaaa~~~~~--~---~e~-------~~~-~~~~~~ 352 (403)
T 2ox4_A 287 IQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVA-GTGVAEAASLHAEIAIPNFC--I---HEH-------HQK-TLLPEY 352 (403)
T ss_dssp ECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCC-SCHHHHHHHHHHHHTCSSBC--C---EEE-------EGG-GGSHHH
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeecCC-CCHHHHHHHHHHHHhCCCcc--e---eee-------ccc-cccchH
Confidence 999999999999999999999999999988776 59999999999999998641 1 000 000 011235
Q ss_pred ccCCCCCceeec----cCCCCeeeEEecchhhhhhhccc
Q 041113 861 EDVTTDPISICH----NSCRGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 861 ~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~ 895 (983)
.|++.+|+.+++ +|++||||+++| ++.++++..
T Consensus 353 ~d~~~~~~~~~~G~~~~p~~PGlGv~~d--~~~l~~~~~ 389 (403)
T 2ox4_A 353 EELCVHNYQPVKGRYKVPELPGIGQDIT--EKLYQISDY 389 (403)
T ss_dssp HTTBSCCCCCBTTEECCCCSSBTSCCBC--GGGGTSEEE
T ss_pred HHhccCCceecCCEEECCCCCCCCcccC--HHHHHhccc
Confidence 677777888874 899999999999 777776654
No 103
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=100.00 E-value=1.2e-51 Score=495.43 Aligned_cols=397 Identities=13% Similarity=0.075 Sum_probs=314.4
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++++++||+.|.++||||||| ||.|++...... ..++......+.+.+. .++.+.+++++
T Consensus 138 ~~~~~i~~A~~~A~~~~~GPV~l-iP~dv~~~~~~~----------------~~~~~~~~~~~~~~~~-~~~~~~i~~~~ 199 (590)
T 1v5e_A 138 QLPKLVDEAARMAIAKRGVAVLE-VPGDFAKVEIDN----------------DQWYSSANSLRKYAPI-APAAQDIDAAV 199 (590)
T ss_dssp GHHHHHHHHHHHHHHTTSEEEEE-EETTGGGCEEEG----------------GGCCCCGGGCCCCCCC-CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEE-EccchhhcccCc----------------ccccccccccccCCCC-CCCHHHHHHHH
Confidence 36789999999999999999999 999964321100 0000000000000011 34557899999
Q ss_pred HHHhcCCceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCC
Q 041113 81 ELVQGVNKGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQ 160 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~ 160 (983)
++|++||||+|++|+|+ .++.+++.+|||++++||++|++ | ||.||++||++ +|++|..++..++..+++
T Consensus 200 ~~l~~a~rpvil~G~g~-~~a~~~l~~lae~~~~Pv~~t~~-g------~g~~~~~~p~~--~G~~g~~g~~~~~~~l~~ 269 (590)
T 1v5e_A 200 ELLNNSKRPVIYAGIGT-MGHGPAVQELARKIKAPVITTGK-N------FETFEWDFEAL--TGSTYRVGWKPANETILE 269 (590)
T ss_dssp HHHHHCSSEEEEECGGG-TTCHHHHHHHHHHHTCCEEECTT-C------GGGSCTTCTTE--EEESSSSSCHHHHHHHHH
T ss_pred HHHHhCCCeEEEEcCch-hHHHHHHHHHHHHHCCCEEEccc-c------CcCCCCCChhh--CccCcccCCHHHHHHHHh
Confidence 99999999999999988 46678999999999999999997 6 89999999995 788887777777778899
Q ss_pred CCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHHHH
Q 041113 161 FDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRALDM 240 (983)
Q Consensus 161 aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~~~ 240 (983)
||+||++|+++.+....+ ..++..++||||+|+.++++++..++.+.+|++.++++|.+.+.......|.+.+...++
T Consensus 270 aDlvl~iG~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~gd~~~~l~~L~~~l~~~~~~~w~~~~~~~~~ 347 (590)
T 1v5e_A 270 ADTVLFAGSNFPFSEVEG--TFRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDAVEESAWWTANLKNIA 347 (590)
T ss_dssp CSEEEEESCCCTTTTTTT--TTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHSCCCCCCHHHHHHHHHHH
T ss_pred CCEEEEECCCCcchhccc--cCCCCCeEEEEeCCHHHHCCCcCCCeEEEcCHHHHHHHHHHhhccCCcHHHHHHHHHHHH
Confidence 999999999997654110 012355799999999999999999999999999999999987754334578776655444
Q ss_pred HHHHHHHhhh--cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 241 MVASEISFQI--CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 241 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
.+. ...... ..+.++++..+++.|.+.+|++++++.|+|+ +.+|..+++.+ ..|++|+ .+.
T Consensus 348 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G~----~~~~~~~~~~~-~~~~~~~-----------~~~ 410 (590)
T 1v5e_A 348 NWR-EYINMLETKEEGDLQFYQVYNAINNHADEDAIYSIDVGN----STQTSIRHLHM-TPKNMWR-----------TSP 410 (590)
T ss_dssp HHH-HHHHHHHTCCSSBCCHHHHHHHHHHHSCTTCEEEECSSH----HHHGGGGTCCC-CTTSEEE-----------CCC
T ss_pred HhH-hhhhhcccCCCCCcCHHHHHHHHHhhCCCCCEEEECCch----HHHHHHHhccc-CCCCeEE-----------cCC
Confidence 332 111110 1245699999999999999999999999999 67777666664 4555544 246
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|+++|. +++||+++|||+|+|++|||+|+++ +++|+++||+||++|+|++.++... .
T Consensus 411 ~~g~mG~--~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~ta~~--~~l~~~ivv~NN~~~~~~~~~q~~~-----~ 481 (590)
T 1v5e_A 411 LFATMGI--AIPGGLGAKNTYPDRQVWNIIGDGAFSMTYPDVVTNVR--YNMPVINVVFSNTEYAFIKNKYEDT-----N 481 (590)
T ss_dssp SSCCTTC--HHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEECSSCTTGGGTTSSS-----C
T ss_pred CCCcccC--hHHHHHHHHHhCCCCeEEEEEechHHhchHHHHHHHHH--hCCCCEEEEEECCchHHHHHHHHHh-----c
Confidence 7899999 999999999998 8999999999999999999999999 9999999999999999998653221 1
Q ss_pred ccccccc-CCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhcc---CCCEEEEEEcCccc
Q 041113 398 LDQYFYT-THNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHL---GTDRVIEVESCIDA 454 (983)
Q Consensus 398 ~~~~~~~-~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~---~~p~lIeV~~~~~~ 454 (983)
+++ +++ ..++||.++|++||+++++|++.+||.++|+++++. ++|+||||.+++.+
T Consensus 482 ~~~-~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~~~~gp~liev~~~~~~ 541 (590)
T 1v5e_A 482 KNL-FGVDFTDVDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAANKAGHTVVIDCKITQDR 541 (590)
T ss_dssp CSC-CCCCCCCCCHHHHHHHTTSEEEEECBHHHHHHHHHHHHHHHHTTCCEEEEEECCSCC
T ss_pred CCC-ccccCCCCCHHHHHHHcCCEEEEECCHHHHHHHHHHHHHhcCCCCCEEEEEEecccc
Confidence 222 333 357999999999999999999999999999999877 99999999999887
No 104
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=100.00 E-value=9e-53 Score=504.42 Aligned_cols=402 Identities=15% Similarity=0.166 Sum_probs=309.2
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.++|||||||+||+|++..+...++. .+........ . +.. +...++.+.+++++
T Consensus 144 ~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~~~~~~~~~~----------~~~~~~~~~~-~-~~~-~~~~~~~~~v~~~~ 210 (573)
T 2iht_A 144 EITDLVDSAVNAAMTEPVGPSFISLPVDLLGSSEGIDTT----------VPNPPANTPA-K-PVG-VVADGWQKAADQAA 210 (573)
T ss_dssp GHHHHHHHHHHHHTBSSCCCEEEEEEHHHHTCCTTCC-------------CCCCCCCCS-S-CBE-EECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEecchHhhhhhccccc----------CCccccccCC-C-Ccc-ccCCCCHHHHHHHH
Confidence 368899999999999999999999999965433100000 0000000000 0 000 00124567899999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-----hhhccCcc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-----DHALLSES 154 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-----g~~~~~~~ 154 (983)
++|++||||+|++|+++. .++.+++.+|||++|+||++|++ + ||+||++||++ +|.+ |..++..+
T Consensus 211 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~hp~~--~G~~~~~~~g~~~~~~~ 281 (573)
T 2iht_A 211 ALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYI-A------KGVLPVGHELN--YGAVTGYMDGILNFPAL 281 (573)
T ss_dssp HHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECST-T------TTSSCTTCTTE--EEECCTTHHHHHTSCHH
T ss_pred HHHHcCCCeEEEECCCccccCHHHHHHHHHHHHCCeEEEecc-c------CccCCCCCcCc--cCccccccCCCCCCHHH
Confidence 999999999999999875 44568999999999999999998 5 79999999995 6777 77777777
Q ss_pred ccccCCCCEEEEeCCc-cccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHH
Q 041113 155 VKDWIQFDVIIQIGSR-ITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCS 233 (983)
Q Consensus 155 ~~~~~~aDlvl~iG~~-~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~ 233 (983)
+..+++||+||+||++ +.+..+..|. ..++.++||||.|+.+++++++.++.+++|++.++++|.+.+.......| +
T Consensus 282 ~~~l~~aDlvl~iG~~~~~~~~~~~~~-~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~w-~ 359 (573)
T 2iht_A 282 QTMFAPVDLVLTVGYDYAEDLRPSMWQ-KGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETATASFGAKQR-H 359 (573)
T ss_dssp HHHHTTCCEEEEETCCGGGCCCHHHHC-CSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHTTTCCCCCC-C
T ss_pred HHHHhhCCEEEEECCCccccccccccC-CCCCCeEEEEeCCHHHhCCCcCCCeeEeCCHHHHHHHHHHhccccCchhH-H
Confidence 7788999999999999 8777776664 21345799999999999999999999999999999999887654323455 4
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCC-----CceEEEecCcchhhhhhhcCCCcccccccccccccCC
Q 041113 234 FLRALDMMVASEISFQICADYSLTEPHVAHELSRALTS-----NSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSE 308 (983)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 308 (983)
.++..++..............++++..+++.|.+.+|+ +++++.|+|+ +.+|..++++. ++|++|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~iv~~d~G~----~~~~~~~~~~~-~~~~~~~---- 430 (573)
T 2iht_A 360 DIEPLRARIAEFLADPETYEDGMRVHQVIDSMNTVMEEAAEPGEGTIVSDIGF----FRHYGVLFARA-DQPFGFL---- 430 (573)
T ss_dssp CCHHHHHHHHHHHTCCCCCSSSBCHHHHHHHHHHHHHHHSCTTCCEEEECSSH----HHHHHHHHCCC-CSTTSEE----
T ss_pred HHHHHHHHhhhhhhccccCcCCcCHHHHHHHHHHhcccccCCCCcEEEEcCcH----hHHHHHHhcCc-CCCCeEE----
Confidence 43333332221111111223579999999999999999 9999999999 55555554443 4454444
Q ss_pred CCCcceeEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCC
Q 041113 309 FPHQWIRVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLL 387 (983)
Q Consensus 309 ~~~~~~~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~ 387 (983)
.++++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|++++.+
T Consensus 431 -------~~~g~g~mG~--~l~~AiGaa~a~~~~~vv~i~GDG~~~~~~~~L~~a~~--~~l~~~ivv~NN~~~~~~~~~ 499 (573)
T 2iht_A 431 -------TSAGCSSFGY--GIPAAIGAQMARPDQPTFLIAGDGGFHSNSSDLETIAR--LNLPIVTVVVNNDTNGLIELY 499 (573)
T ss_dssp -------CCSSSCCTTC--HHHHHHHHHHHSTTSCEEEEEEHHHHHHTGGGHHHHHH--HTCCCEEEEEECSBCHHHHHH
T ss_pred -------cCCCCccccc--HHHHHHHHHHhCCCCcEEEEEccHHHHhHHHHHHHHHH--hCCCeEEEEEECCcchhhHHH
Confidence 2467899999 999999999998 8999999999999999999999999 999999999999999999764
Q ss_pred CCCCCCCccccccccc---cCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 388 PIADRTEPRILDQYFY---TTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 388 ~~~~~~~~~~~~~~~~---~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
+.. .+...+. ...++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++
T Consensus 500 ~~~------~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~ 561 (573)
T 2iht_A 500 QNI------GHHRSHDPAVKFGGVDFVALAEANGVDATRATNREELLAALRKGAELGRPFLIEVPVNY 561 (573)
T ss_dssp HHH------HHSSCCGGGTBCCCCCHHHHHHHTTCEEEECCSHHHHHHHHHHHHTSSSCEEEEEEBCC
T ss_pred HHH------hcCCCcCccccCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 211 0111011 1235899999999999999999999999999999988999999999998
No 105
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=100.00 E-value=3.6e-52 Score=498.55 Aligned_cols=398 Identities=17% Similarity=0.197 Sum_probs=313.5
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCC---CCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFRE---PLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMA 77 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~---~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 77 (983)
++++.+++|++.|.++|||||||+||.|. ++.+... ..+... ... +...++.+.++
T Consensus 137 ~~~~~l~~A~~~a~~~~~GPV~l~iP~dv~~~~~~~~~~----------------~~~~~~--~~~---~~~~~~~~~v~ 195 (563)
T 2uz1_A 137 HIPRLVMQAIRAALSAPRGPVLLDLPWDILMNQIDEDSV----------------IIPDLV--LSA---HGARPDPADLD 195 (563)
T ss_dssp GHHHHHHHHHHHHHSSSCCCEEEEEEHHHHHCEEEGGGS----------------CCCCCC--CCS---SCCBCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCceEEEEeCHHHhhhhcccccc----------------cccccc--cCC---CCCCCCHHHHH
Confidence 36789999999999999999999999982 2111000 000000 000 01234567899
Q ss_pred HHHHHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhh-ccccccccchhhhccCccc
Q 041113 78 EVLELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLET-EQNILFLDHLDHALLSESV 155 (983)
Q Consensus 78 ~~~~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~-hp~~~~~g~~g~~~~~~~~ 155 (983)
+++++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.||++ ||++ +|.+| .++..++
T Consensus 196 ~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~~p~~--~G~~g-~~~~~~~ 265 (563)
T 2uz1_A 196 QALALLRKAERPVIVLGSEASRTARKTALSAFVAATGVPVFADYE-G------LSMLSGLPDAMR--GGLVQ-NLYSFAK 265 (563)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHCCCEEECGG-G------GGGGTTSCGGGE--EEEGG-GGGGTTT
T ss_pred HHHHHHHcCCCcEEEECCccccccHHHHHHHHHHHhCCcEEEcCc-c------cCcCCCCCChhh--cCCCC-CCCHHHH
Confidence 999999999999999999876 45568999999999999999998 5 8999999 9995 78999 7777777
Q ss_pred cccCCCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCC----CCChh
Q 041113 156 KDWIQFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVP----HRSSK 230 (983)
Q Consensus 156 ~~~~~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~----~~~~~ 230 (983)
. +++||+||++|+++.+..+..|....+ ..++||||.|+.+++++++.++.+.+|++.++++|.+.+.. .....
T Consensus 266 ~-~~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~~~ 344 (563)
T 2uz1_A 266 A-DAAPDLVLMLGARFGLNTGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVADVGGTIEALAQATAQDAAWPDRGD 344 (563)
T ss_dssp T-TCCCSEEEEESCCSSGGGTTTSCSSSCTTSEEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHHHTTSCCCCCCHH
T ss_pred h-hcCCCEEEEECCCCcccccccccccCCCCCeEEEEECCHHHhCCCCCCCeEEEcCHHHHHHHHHHhhhhcccccCcHH
Confidence 7 899999999999998776644432223 35799999999999999999999999999999999887654 23456
Q ss_pred HHHHHHH-HHHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCC
Q 041113 231 WCSFLRA-LDMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEF 309 (983)
Q Consensus 231 w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 309 (983)
|.+++.. .++.+........... ++++..+++.|.+.+|++++++.|+|+ +.+|..+++.+ ..|++|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~iv~~d~G~----~~~~~~~~~~~-~~~~~~~----- 413 (563)
T 2uz1_A 345 WCAKVTDLAQERYASIAAKSSSEH-ALHPFHASQVIAKHVDAGVTVVADGAL----TYLWLSEVMSR-VKPGGFL----- 413 (563)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSS-SCCHHHHHHHHHTTCSTTEEEEECSSH----HHHHHHHHHTT-SCCSEEE-----
T ss_pred HHHHHHHHHHHHhHhhhhccccCC-CcCHHHHHHHHHHhCCCCcEEEEcCch----HHHHHHHhccc-cCCCeEE-----
Confidence 8766655 4433221110111122 799999999999999999999999998 66666665553 4444444
Q ss_pred CCcceeEeecCCCCCccchHHHHHhhhhcc---CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccC
Q 041113 310 PHQWIRVAGNRGASGIDGLLSTAIGFAVGC---NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSL 386 (983)
Q Consensus 310 ~~~~~~~~~~~G~mG~~g~lpaaiGaalA~---~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~ 386 (983)
.++++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|++++.
T Consensus 414 ------~~~g~g~~G~--~l~~AiGaa~a~~~~~~~vv~i~GDG~~~~~~~~L~ta~~--~~l~~~ivv~nN~~~~~~~~ 483 (563)
T 2uz1_A 414 ------CHGYLGSMGV--GFGTALGAQVADLEAGRRTILVTGDGSVGYSIGEFDTLVR--KQLPLIVIIMNNQSWGATLH 483 (563)
T ss_dssp ------CCCTTCCTTT--HHHHHHHHHHHHHHHTCEEEEEEEHHHHGGGTTHHHHHHH--HTCCCEEEEEECSBCHHHHH
T ss_pred ------CCCCCccccC--hHHHHHHHHHHhhCCCCeEEEEEccHHHhCCHHHHHHHHH--hCCCeEEEEEeCCcchHHHH
Confidence 3577899999 999999999996 7999999999999999999999999 99999999999999999975
Q ss_pred CCCCCCCCccccc--cccccC-CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchH
Q 041113 387 LPIADRTEPRILD--QYFYTT-HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANAT 457 (983)
Q Consensus 387 ~~~~~~~~~~~~~--~~~~~~-~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~ 457 (983)
++. ..+. +.+++. .++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++++..+
T Consensus 484 ~~~------~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~~~~~p 551 (563)
T 2uz1_A 484 FQQ------LAVGPNRVTGTRLENGSYHGVAAAFGADGYHVDSVESFSAALAQALAHNRPACINVAVALDPIPP 551 (563)
T ss_dssp HHH------HHTCTTCCCSCBCCCCCHHHHHHHTTCEEEEECSHHHHHHHHHHHHHSSSCEEEEEECCSCCCCH
T ss_pred HHH------HhcCCCcccCCcCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHHCCCCEEEEEEeccccCCc
Confidence 321 1111 233333 5689999999999999999999999999999998899999999999765443
No 106
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=1e-51 Score=464.67 Aligned_cols=347 Identities=15% Similarity=0.123 Sum_probs=260.8
Q ss_pred CccceeEeEEEEEEEE----------------eeCCCC---------CccccccccCcceeeeEEEEEEEECCCCEEEEe
Q 041113 489 SLSICKICRMEYSLYR----------------IQLCAP---------PTSSYIDHNRSRFCREGFILSLYLEDGSVGYGE 543 (983)
Q Consensus 489 ~~~~mkI~~v~~~~~~----------------~pl~~p---------~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE 543 (983)
+|+.-||++|+.+.+. .|+..| +.++++ ...++.++|||+||+|++||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ts~g-----~~~~~~v~V~v~td~G~~G~Ge 76 (404)
T 3ekg_A 2 SLSIPTIKQVRAFVLRGGGADYHDQGDGHWIDDHISTPMGKYPEYRQSRRSFG-----INVLGTLVVEIEASDGNVGFAV 76 (404)
T ss_dssp CCCCCBEEEEEEEEECSSTTSTTCCCTTCGGGSSCCCTTTTSGGGTSCTGGGT-----TTSSCEEEEEEEETTSCEEEEE
T ss_pred CCCCCceeeEEEEEecCCCCccCCCCCCceecccccCcchhhhhhcccccccC-----cccccEEEEEEEECCCCEEEEe
Confidence 3666799999999886 122222 233333 1247889999999999999999
Q ss_pred ecCcCcCcccHHHHHHHH-HHHHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCC
Q 041113 544 VAPLEIHKENLLDAEEQL-RFLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSS 622 (983)
Q Consensus 544 ~~~~~~~~~~~~~~~~~l-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~p 622 (983)
+.+. +. ....+ +.+.|.|+|+++.+++.++..++... ......+...+|++|||+|||||+||.+|+|
T Consensus 77 ~~~g----~~---~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~----~~~g~~G~~~~A~sAID~ALwDl~gK~~g~P 145 (404)
T 3ekg_A 77 TTGG----EP---AAYIVEKHLARFLEGARVTDIERIWDQMYNST----LYYGRKGLVINTISGVDLALWDLLGKVRREP 145 (404)
T ss_dssp EECH----HH---HHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHH----GGGCSSTHHHHHHHHHHHHHHHHHHHHHTSB
T ss_pred CCCc----HH---HHHHHHHHHHHHHCCCCcccHHHHHHHHHHHh----hhcCCCcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 8642 21 12223 46889999999998777765332211 0111234567899999999999999999999
Q ss_pred hhhhcCCCCccccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCC-----ChHHHHHHHHHHHHH
Q 041113 623 FLNILYPLTEIDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRA-----DPIKDAEVIQEVRKK 697 (983)
Q Consensus 623 v~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~-----~~~~d~~~v~~vr~~ 697 (983)
||+||||.. +++|++|++. .+++ ..+++||+++|+|+|... ++++|+++|++||++
T Consensus 146 v~~LLGG~~---------r~~v~~y~~g---~~~~-------~~~~~Gf~~~K~Kv~~g~~~g~~~~~~di~~v~avRea 206 (404)
T 3ekg_A 146 VHQLLGGAV---------RDELQFYATG---ARPD-------LAQKMGFIGGKMPLHHGPSEGEEGLKKNLEELATMRER 206 (404)
T ss_dssp HHHHTTCCS---------SSEEEEEEES---SCHH-------HHHHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCC---------CCeeEEecCC---CCHH-------HHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHH
Confidence 999999986 5789999863 2443 234689999999997421 247899999999999
Q ss_pred cCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCc--EEeCCCccCcCCChHHHHHhh
Q 041113 698 VGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLP--VALDETIDKFQKDPLNMLEKY 773 (983)
Q Consensus 698 ~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ip--Ia~dEs~~~~~~~~~~~~~~~ 773 (983)
+|+++.||+|+|++||+++|+++++.|+++++.|||||++ |++++++|++++++| |++||++++..+ ++.+
T Consensus 207 ~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~-----~~~l 281 (404)
T 3ekg_A 207 VGPDFWLMFDCWMSLDLNYATRLARGAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEHEATRWG-----FRML 281 (404)
T ss_dssp HCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTCCHHHH-----HHHH
T ss_pred hCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCccCCHHH-----HHHH
Confidence 9999999999999999999999999999999999999998 789999999998776 999999998753 6666
Q ss_pred cCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccC
Q 041113 774 AHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQG 852 (983)
Q Consensus 774 ~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g 852 (983)
++.+ +|++|+|++++|||+++++++++|+++|++++.+++ + .+++|++++++|+. . .++... .+..
T Consensus 282 i~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~~---~---~a~~hl~aa~pn~~--~---~E~~~~--~~~~ 348 (404)
T 3ekg_A 282 LEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHGS---S---VYSYHFVATRQNSP--F---AEFLMM--APKA 348 (404)
T ss_dssp HHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC---T---HHHHHHHTTCTTCC--S---EEEECC--STTS
T ss_pred HHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecCc---H---HHHHHHHHhCCCcc--e---eeeccc--cccc
Confidence 6554 799999999999999999999999999999876663 1 38999999999752 1 111110 0000
Q ss_pred ccchhcccccCCCCCceeec----cC--CCCeeeEEecchhhh
Q 041113 853 LGTYQWLKEDVTTDPISICH----NS--CRGFVEASVAKATHI 889 (983)
Q Consensus 853 ~~~~~~~~~d~~~~p~~~~~----~P--~~pGlGv~~d~a~~~ 889 (983)
-....|+ .+++..++.+++ +| ++|||||++|++..+
T Consensus 349 ~~~~~~~-~~~~~~~~~~~dG~i~vP~~~~PGLGveld~~~~~ 390 (404)
T 3ekg_A 349 DQVVPMF-HPQLLGEPVPENGRMRLSRLDQPGFGVTLNPECQL 390 (404)
T ss_dssp CSCCCTT-TTTEETCCCCBTTEEEGGGCCSSBTSCEECTTSCC
T ss_pred cccchhh-hhcccCCCcccCCEEECCCCCCCcccceECccccc
Confidence 0112233 344444444553 99 999999999954433
No 107
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=1.7e-51 Score=466.04 Aligned_cols=359 Identities=12% Similarity=0.048 Sum_probs=266.0
Q ss_pred eeEeEEEEEEEE-----------------------eeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc
Q 041113 493 CKICRMEYSLYR-----------------------IQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI 549 (983)
Q Consensus 493 mkI~~v~~~~~~-----------------------~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~ 549 (983)
-||++|+.+.+. .||++++......-+.|...++.++|||+||+|++||||+.+.+
T Consensus 9 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~~~~~ts~g~~~~~~vlV~V~tddGi~G~Ge~~~~~- 87 (455)
T 3fxg_A 9 PKIKAIRSFIIGGVGSGGDYHNVKGGHWLIDSDISTPASKWEQYKKSRTSWGINVLGSFLVEIEATDGTVGFATGFGGP- 87 (455)
T ss_dssp CCEEEEEEEEECSSSCSSCTTCCCTTCHHHHSCCCCTTTTSGGGTSCTTTTTTTSSCEEEEEEEETTSCEEEEEEECHH-
T ss_pred CcceeEEeEEeecccCCCCCCCCCCCcccccccccCcccccccccccccccccccceEEEEEEEECCCCEEEEeCcCCH-
Confidence 489999998873 56666653221111112233788999999999999999986432
Q ss_pred CcccHHHHHHHHHHHHhHhccCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCC
Q 041113 550 HKENLLDAEEQLRFLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYP 629 (983)
Q Consensus 550 ~~~~~~~~~~~l~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg 629 (983)
.. .....+.+.|.|+|+++.+++.++..++.. .......+...+|++|||||||||+||.+|+|||+||||
T Consensus 88 ---~~--~~~i~~~lap~LiG~dp~~ie~i~~~m~~~----~~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG 158 (455)
T 3fxg_A 88 ---PA--CWLVHQHFERFLIGADPRNTNLLFEQMYRA----SMFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGG 158 (455)
T ss_dssp ---HH--HHHHHHTTHHHHTTCCTTCHHHHHHHHHHH----TTTTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTC
T ss_pred ---HH--HHHHHHHHHHHHCCCCcchHHHHHHHHHHh----hhhccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhCC
Confidence 11 111224688999999999887776533211 111112234467999999999999999999999999999
Q ss_pred CCccccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC-----CChHHHHHHHHHHHHHcCCCcEE
Q 041113 630 LTEIDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARR-----ADPIKDAEVIQEVRKKVGHRIEL 704 (983)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~-----~~~~~d~~~v~~vr~~~g~~~~l 704 (983)
.. +++|++|++. .+++ .++++||+++|+|+|.. .++++|+++|++||+++|+++.|
T Consensus 159 ~~---------rd~vp~y~~g---~~~~-------~~~~~Gf~~~KlKv~~~~~~G~~~~~~di~rv~avRea~G~d~~L 219 (455)
T 3fxg_A 159 AT---------KERLDFYCTG---PEPT-------AAKAMGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGPDFPI 219 (455)
T ss_dssp CS---------CSEEEEEEES---SCHH-------HHHHHTCSCEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSCE
T ss_pred cc---------CCeeEEeecC---CCHH-------HHHHcCCCEEEEcCCCCcccccccHHHHHHHHHHHHHHhCCCCeE
Confidence 86 5889999863 3443 23568999999999641 12578999999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhc-CCcEEeCCCccCcCCChHHHHHhhcCCC-ceE
Q 041113 705 RVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEES-GLPVALDETIDKFQKDPLNMLEKYAHPG-IVA 780 (983)
Q Consensus 705 ~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~ 780 (983)
|||+|++|++++|+++++.|+++++.|||||++ |++++++|++++ .+|||+||++++..+ +..+++.+ +|+
T Consensus 220 ~vDaN~~wt~~~Ai~~~~~Le~~~l~~iEEPl~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d-----~~~li~~~avDi 294 (455)
T 3fxg_A 220 MVDCYMSLNVSYTIELVKACLDLNINWWEECLSPDDTDGFALIKRAHPTVKFTTGEHEYSRYG-----FRKLVEGRNLDI 294 (455)
T ss_dssp EEECTTCCCHHHHHHHHHHTGGGCCSEEECCSCGGGGGGHHHHHHHCTTSEEEECTTCCHHHH-----HHHHHTTCCCSE
T ss_pred EEeCCCCCCHHHHHHHHHhcccCCcceecCCCCcchHHHHHHHHHhCCCCeEECCCccCCHHH-----HHHHHHcCCCCE
Confidence 999999999999999999999999999999998 788899999887 589999999998753 66666654 799
Q ss_pred EEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccc
Q 041113 781 IVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLK 860 (983)
Q Consensus 781 i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 860 (983)
+|+|++++|||+++++++++|+++|++++.|++ ..+++|+++++||+. . .++.. ..+.+....+|+.
T Consensus 295 iq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~~------~~aslHlaaa~pn~~--~---~E~~~--~~~~~~~~~~~~~ 361 (455)
T 3fxg_A 295 IQPDVMWLGGLTELLKVAALAAAYDVPVVPHAS------GPYSYHFQISQPNTP--F---QEYLA--NSPDGKSVLPVFG 361 (455)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCSC------THHHHHHHTTCTTCC--C---EEEEC--CSTTSSSCCCTTG
T ss_pred EEECccccCCHHHHHHHHHHHHHcCCEEEecch------HHHHHHHHHhCCCCc--e---Eeecc--cccccccccchhc
Confidence 999999999999999999999999999876654 147999999999752 1 11110 0000001112332
Q ss_pred ccCCCCCceee----ccC--CCCeeeEEecchhhhhhhccccccccc
Q 041113 861 EDVTTDPISIC----HNS--CRGFVEASVAKATHILQNLQINNDVIC 901 (983)
Q Consensus 861 ~d~~~~p~~~~----~~P--~~pGlGv~~d~a~~~~~~~~~~~~~i~ 901 (983)
+++.++..++ .+| ++|||||++| ++.++++.-....+.
T Consensus 362 -~l~~~~~~~~dG~i~vp~~d~PGLGveld--e~~~~k~~~~~~~~~ 405 (455)
T 3fxg_A 362 -DLFIDEPIPTKGYLTTADLDKPGFGLTIN--PAARAKLIPSDYLFK 405 (455)
T ss_dssp -GGBSCCCCCTTSEEETGGGCSSBTCCCBC--HHHHTTEEEGGGGGC
T ss_pred -ccccCCCeeeCCEEeCCCCCCCccCcccC--HHHHHHhcccccccC
Confidence 3333333344 378 9999999999 778878764444333
No 108
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=100.00 E-value=2.2e-52 Score=505.64 Aligned_cols=407 Identities=20% Similarity=0.227 Sum_probs=307.3
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.|++||++|.++|||||||+||.|+............ ...+...... +.......++.+.+++++
T Consensus 215 ~i~~~i~~A~~~A~~grpGPV~l~lP~Dv~~~~~~~p~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~i~~a~ 283 (677)
T 1t9b_A 215 ELPLRINEAFEIATSGRPGPVLVDLPKDVTAAILRNPIPTK----------TTLPSNALNQ-LTSRAQDEFVMQSINKAA 283 (677)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEEEEHHHHHSBCCSCBC-------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEcCHHHhhhhcccccccc----------cccccccccC-CCccccccCCHHHHHHHH
Confidence 37899999999999999999999999874211110000000 0000000000 000001123456899999
Q ss_pred HHHhcCCceEEEEccCCC-h-hHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-E-DEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~-~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~ 158 (983)
++|++||||+|++|+|+. . .+.+++.+|||++|+||++|++ | ||+||++||++ +|++|..++..++..+
T Consensus 284 ~~L~~AkrPvIl~G~g~~~~~~~~~~l~~lae~~~~PV~tt~~-g------kg~~~~~hpl~--lG~~G~~g~~~~~~~l 354 (677)
T 1t9b_A 284 DLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQ-G------LGSFDQEDPKS--LDMLGMHGCATANLAV 354 (677)
T ss_dssp HHHHTCSSEEEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGG-G------TTSSCTTSTTE--EEECSTTSCHHHHHHH
T ss_pred HHHHhCCCeEEEECcccccCchhHHHHHHHHHHhCCCeeeccc-c------CccCCCCCccc--cCcCCccCcHHHHHHH
Confidence 999999999999999985 3 3457999999999999999986 6 89999999996 6777777766677778
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCC-ce---------EEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCC-CC
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFP-CT---------YILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVP-HR 227 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~-~~---------~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~-~~ 227 (983)
++||+||+||+++++..+..+ ..+.+ .+ +||||+|+.+++++++.++.|.+|++.+|++|++.+.. ..
T Consensus 355 ~~aDlvl~iG~r~~~~~t~~~-~~~~~~~~~~~~~~~~~iI~idid~~~~~~~~~~~~~i~gD~~~~l~~L~~~l~~~~~ 433 (677)
T 1t9b_A 355 QNADLIIAVGARFDDRVTGNI-SKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIFPVKE 433 (677)
T ss_dssp HHCSEEEEESCCCCTTTSCSG-GGSSHHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTSCCCCC
T ss_pred hcCCEEEEECCccCcccccCc-cccCcccccccccCCceEEEEECCHHHhCCcccCCEEEeCCHHHHHHHHHHHhhcccc
Confidence 899999999999976544322 22211 23 99999999999999999999999999999999987754 33
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHhhc---CCCceEEEecCcchhhhhhhcCCCccccccccccc
Q 041113 228 SSKWCSFLRALDMMVASEISFQICADYSLTEPHVAHELSRAL---TSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIM 304 (983)
Q Consensus 228 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~ 304 (983)
...|.+.+...++.+.... .......++++..+++.|++.+ +++.+++.|.|+ +.+|..+++.+ +.|++|+
T Consensus 434 ~~~w~~~~~~~~~~~~~~~-~~~~~~~~l~~~~v~~~L~~~l~~~~~~~iv~~~vg~----~~~~~~~~~~~-~~p~~~~ 507 (677)
T 1t9b_A 434 RSEWFAQINKWKKEYPYAY-MEETPGSKIKPQTVIKKLSKVANDTGRHVIVTTGVGQ----HQMWAAQHWTW-RNPHTFI 507 (677)
T ss_dssp CHHHHHHHHHHHHHSCCCC-CCCCTTCCBCHHHHHHHHHHHHHTTCSCEEEEECSSH----HHHHHHHHSCC-CSTTCEE
T ss_pred chHHHHHHHHHHHhccccc-ccccCCCCcCHHHHHHHHHHHhhcCCCCEEEEeCCch----HHHHHHHhccc-CCCCeEE
Confidence 4568776655443221000 0001235689999999999999 567777788887 77787666554 5555554
Q ss_pred ccCCCCCcceeEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCcc
Q 041113 305 LNSEFPHQWIRVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAI 383 (983)
Q Consensus 305 ~~~~~~~~~~~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~ 383 (983)
.++++|+||+ ++|+|+|+++|. +++|||++|||||+|++|||+|+++ +++|++|||+||++|+|
T Consensus 508 -----------~sg~~G~mG~--~lpaAiGaalA~p~~~Vv~i~GDGsf~~~~~eL~ta~~--~~l~v~ivV~NN~~~g~ 572 (677)
T 1t9b_A 508 -----------TSGGLGTMGY--GLPAAIGAQVAKPESLVIDIDGDASFNMTLTELSSAVQ--AGTPVKILILNNEEQGM 572 (677)
T ss_dssp -----------CCCSSCCTTC--HHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHH--HTCCCEEEEEECSSCHH
T ss_pred -----------eCCCcchhhc--hHHHHHHHHHhCCCCeEEEEEeehHHhccHHHHHHHHH--hCCCeEEEEEeCCCchh
Confidence 3588899999 999999999998 8999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCCcccc-cccccc-CCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccc
Q 041113 384 FSLLPIADRTEPRIL-DQYFYT-THNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDAN 455 (983)
Q Consensus 384 ~~~~~~~~~~~~~~~-~~~~~~-~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~ 455 (983)
++.++. ..+ .++..+ ..++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++.++
T Consensus 573 ~~~~~~------~~~~~~~~~~~~~~~d~~~la~a~G~~~~~v~~~~el~~al~~a~~~~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 573 VTQWQS------LFYEHRYSHTHQLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFVSTKGPVLLEVEVDKKVP 640 (677)
T ss_dssp HHHHHH------HHSTTCCCSCCCCCCCHHHHHHHTTCEEEEECSHHHHHHHHHHHHHCSSCEEEEEEBCSSCC
T ss_pred hhhhhh------hhcCCCcccCcCCCCCHHHHHHHcCCeEEEECCHHHHHHHHHHHHHCCCcEEEEEEecCCcc
Confidence 876421 111 112222 247899999999999999999999999999999988999999999998654
No 109
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=8.2e-51 Score=463.28 Aligned_cols=348 Identities=13% Similarity=0.086 Sum_probs=268.2
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEEC---CCCEEEEeecCcCcCcccHHHHHHHHH-HHHhHh
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLE---DGSVGYGEVAPLEIHKENLLDAEEQLR-FLLHFM 568 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~---~G~~G~GE~~~~~~~~~~~~~~~~~l~-~~~~~l 568 (983)
|||++|+ .+++|++.||.++.+.. ..++.++|+|+|+ +|++||||+.+ ..+.++.. ..++ .+.|.|
T Consensus 6 mkI~~i~--~~~~pl~~p~~~~~~~~----~~~~~~~V~v~td~~~~G~~G~GE~~~-~~~~~~~~---~~i~~~l~~~l 75 (392)
T 1tzz_A 6 VRIVDVR--EITKPISSPIRNAYIDF----TKMTTSLVAVVTDVVREGKRVVGYGFN-SNGRYGQG---GLIRERFASRI 75 (392)
T ss_dssp CCEEEEE--EEEEECCC-------------CCCEEEEEEEEEEEECSSSEEEEEEEC-CTTSCCCH---HHHHHTHHHHH
T ss_pred cEEeEEE--EEEecCCCccccccccc----CcceEEEEEEEECCCCCCCEEEEEecC-CCchHHHH---HHHHHHHHHHH
Confidence 8999999 88899999999988754 3478999999999 99999999987 33333332 3343 488999
Q ss_pred ccCcc----------cccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC----CCCccc
Q 041113 569 TGAKI----------SYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY----PLTEID 634 (983)
Q Consensus 569 ~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG----g~~~~~ 634 (983)
+|+++ .+...++.. +.........+..++|++|||+||||+.||.+|+|||+||| |..
T Consensus 76 ~G~d~~~~~~~~~~~~~~~~i~~~-----l~~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~~~~g~~--- 147 (392)
T 1tzz_A 76 LEADPKKLLNEAGDNLDPDKVWAA-----MMINEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERHGVKA--- 147 (392)
T ss_dssp HTSCGGGSBCTTSSSBCHHHHHHH-----HTTTCCSCCCSHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHTTSCC---
T ss_pred cCCCchhhhcccccccCHHHHHHH-----HHHhccccCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCccCCCc---
Confidence 99988 433332211 11111111122467899999999999999999999999999 854
Q ss_pred cccccccceeEEEEeecC---CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCC
Q 041113 635 EEISKRSTSIKICALIDS---NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRN 711 (983)
Q Consensus 635 ~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~ 711 (983)
+++||+|++... ..+++++.+.+++++++||++||+|+|. .+++.|+++|++||+++|+++.|++|+|++
T Consensus 148 ------~~~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~~e~v~avr~a~g~~~~l~vDan~~ 220 (392)
T 1tzz_A 148 ------NPRVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGG-APIEEDRMRIEAVLEEIGKDAQLAVDANGR 220 (392)
T ss_dssp ------CCEEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSS-SCHHHHHHHHHHHHHHHTTTCEEEEECTTC
T ss_pred ------CCCeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CCHHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence 467999876422 2379999999999999999999999997 378999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC-----CceEEEEc
Q 041113 712 WTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP-----GIVAIVIK 784 (983)
Q Consensus 712 ~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~-----~~~~i~~k 784 (983)
||.++|+++++.|+++++.|||||++ +++.+++|++++++||++||++.+..+ +..+++. .+|++++|
T Consensus 221 ~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~-----~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 221 FNLETGIAYAKMLRDYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQD-----ARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHH-----HHHHHHHSCCCTTTCEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCeecCCCChhhHHHHHHHHhhCCCCEEECCCCCCHHH-----HHHHHHcCCCccCCcEEEEC
Confidence 99999999999999999999999998 788999999999999999999988653 5555544 47999999
Q ss_pred CCCcCCHHHHHHHHHHHHHcCCc---EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccc
Q 041113 785 PSVIGGFENAGLIARWAQRHGKM---AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKE 861 (983)
Q Consensus 785 ~~~~GGl~~~~~~~~~A~~~gi~---~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 861 (983)
++++||++++++++++|+++|++ +++|+ ++ ++.+|++++++|.. .....+...++ .
T Consensus 296 ~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~-----~~-~~~~hl~aa~~~~~--------------~~~~~~~~~~~-~ 354 (392)
T 1tzz_A 296 CALSYGLCEYQRTLEVLKTHGWSPSRCIPHG-----GH-QMSLNIAAGLGLGG--------------NESYPDLFQPY-G 354 (392)
T ss_dssp TTTTTCHHHHHHHHHHHHHTTCCGGGBCCSC-----CB-HHHHHHHHHHTCSC--------------EEECTTCSTTT-B
T ss_pred ccccCCHHHHHHHHHHHHHCCCCCceEeecH-----HH-HHHHHHHHhCCCcc--------------ccccccccchH-H
Confidence 99999999999999999999999 88774 11 24599999988520 00001111112 3
Q ss_pred cCCCCCceeec----cCCCCeeeEEecchhhhhhhcc
Q 041113 862 DVTTDPISICH----NSCRGFVEASVAKATHILQNLQ 894 (983)
Q Consensus 862 d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~ 894 (983)
+++. |+.+++ +|++||||+++| ++.++++.
T Consensus 355 ~~~~-~~~~~~G~~~~p~~PGlGv~~d--~~~~~~~~ 388 (392)
T 1tzz_A 355 GFPD-GVRVENGHITMPDLPGIGFEGK--SDLYKEMK 388 (392)
T ss_dssp SCST-TCCCBTTEEECCCCSBTSGGGC--HHHHHHHH
T ss_pred hccC-CcceeCCEEECCCCCccCCccC--HHHHHHHH
Confidence 4555 777763 899999999999 77777765
No 110
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=6.1e-52 Score=463.36 Aligned_cols=320 Identities=18% Similarity=0.222 Sum_probs=263.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC---cCcccHHHHHHHHHHHHhHhc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE---IHKENLLDAEEQLRFLLHFMT 569 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~---~~~~~~~~~~~~l~~~~~~l~ 569 (983)
|||++|+++.+++|++.||.++.+.+ ..++.++|+|+|++|++||||+.+.+ ++.++...+...++.+.|.++
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~l~~~~~~l~ 77 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTL----THRDCLFIELIDDKGNAYFGECNAFQTDWYDHETIASVKHVIEQWFEDNR 77 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEE----EEEEEEEEEEEETTCCEEEEECCCBSSTTSCSCBHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEEEEeecccCCeecccEEE----EeeeEEEEEEEECCCCEEEEEecCCCCCcCCCCCHHHHHHHHHHHHHHHc
Confidence 79999999999999999999887654 44889999999999999999998875 466777777777777669999
Q ss_pred cCcccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEe
Q 041113 570 GAKISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICAL 649 (983)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~ 649 (983)
|+++.+++.++..+. .. ...++|++|||+||||++||..|+ . |++|++
T Consensus 78 G~d~~~~~~l~~~l~-----~~------~g~~~a~said~ALwDl~gk~~g~---------~------------v~~~~~ 125 (342)
T 2okt_A 78 NKSFETYEAALKLVD-----SL------ENTPAARATIVMALYQMFHVLPSF---------S------------VAYGAT 125 (342)
T ss_dssp TCCBCSHHHHHHTTG-----GG------TTCHHHHHHHHHHHHHTTCCCCCE---------E------------EECEEE
T ss_pred CCCcCCHHHHHHHHH-----Hh------hcChHHHHHHHHHHHHHhhhhhCc---------e------------EeeeEE
Confidence 999887655543221 11 125789999999999999998876 2 667776
Q ss_pred e-cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 650 I-DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 650 ~-~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
+ +. .+ +++ ++++++||++||+|+| ++ |+++|++||+++ +++.||||+|++||+++| ++++.|++++
T Consensus 126 ~~g~-~~-e~~----~~~~~~G~~~~KiKvg----~~-d~~~v~avr~~~-~~~~l~vDaN~~~~~~~A-~~~~~l~~~~ 192 (342)
T 2okt_A 126 ASGL-SN-KQL----ESLKATKPTRIKLKWT----PQ-IMHQIRVLRELD-FHFQLVIDANESLDRQDF-TQLQLLAREQ 192 (342)
T ss_dssp ESSC-CH-HHH----HHHHHHCCSEEEEECC----TT-HHHHHHHHTTSS-SCCEEEEECTTCCCGGGH-HHHHHHGGGC
T ss_pred EecC-CH-HHH----HHHHHcCCcEEEEEeC----HH-HHHHHHHHHHhC-CCCeEEEECCCCCCHHHH-HHHHHHhhCC
Confidence 5 32 22 444 6677889999999998 47 999999999999 999999999999999999 9999999999
Q ss_pred CceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcC
Q 041113 729 LQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHG 805 (983)
Q Consensus 729 i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~g 805 (983)
+.|||||++ +++++++ +++++|||+||++++..+ +..+++ ..+|++|+|++++||++++++++++|+++|
T Consensus 193 i~~iEqP~~~~d~~~~~~--~~~~ipIa~dEs~~~~~~-----~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 193 VLYIEEPFKDISMLDEVA--DGTIPPIALDEKATSLLD-----IINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp EEEEECCCSSGGGGGGSC--TTSSCCEEESTTCCCHHH-----HHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CcEEECCCCCccHHHHHH--hcCCCCEEecCCCCCHHH-----HHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 999999999 4555555 577999999999999753 555554 457999999999999999999999999999
Q ss_pred CcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec---cCCCCeeeEE
Q 041113 806 KMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH---NSCRGFVEAS 882 (983)
Q Consensus 806 i~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~---~P~~pGlGv~ 882 (983)
+++++|+++|++|++++++|+++++.. +... .++..++.+|++.+|+.+++ .++.||||++
T Consensus 266 i~~~~~~~~es~i~~aa~~hlaa~~~~-------------~~~l---~~~~~~~~~d~~~~~~~~~~G~~~~~~PGlg~~ 329 (342)
T 2okt_A 266 AKVVIGGMYEYGLSRYFTAMLARKGDY-------------PGDV---TPAGYYFEQDVVAHSGILKEGRLEFRPPLVDIT 329 (342)
T ss_dssp CEEEEBCSSCCHHHHHHHHHHHTTSSS-------------CCBC---CCTTSSCSSCSSTTTTEEETTEEEECCCCCCGG
T ss_pred CEEEEcCCcccHHHHHHHHHHHHhccc-------------cccc---CCchhhhhccccCCCceEECCEEEeCcccCCHH
Confidence 999999999999999999999998721 0011 13445678898888998884 3488999987
Q ss_pred ec
Q 041113 883 VA 884 (983)
Q Consensus 883 ~d 884 (983)
+-
T Consensus 330 ~~ 331 (342)
T 2okt_A 330 QL 331 (342)
T ss_dssp GC
T ss_pred Hc
Confidence 54
No 111
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=100.00 E-value=3.9e-52 Score=500.07 Aligned_cols=400 Identities=15% Similarity=0.135 Sum_probs=307.4
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++||+.|.++|||||||+||+|++..+.... ...+.... ..+. ....++ +.+++++
T Consensus 138 ~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~~~~~~~~--------------~~~~~~~~-~~~~--~~~~~~-~~v~~~~ 199 (589)
T 2pgn_A 138 KVGEAIHEAFRVAEGHPAGPAYVDIPFDLTADQIDDK--------------ALVPRGAT-RAKS--VLHAPN-EDVREAA 199 (589)
T ss_dssp GHHHHHHHHHHHHTSSSCCEEEEEEETHHHHCEEECT--------------TTSCCCCC-CCCC--CCCCCH-HHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCccEEEEeCHhhhhcccccc--------------cccccccc-cCCc--cCCChH-HHHHHHH
Confidence 3688999999999999999999999998421110000 00000000 0000 001233 6799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccC
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWI 159 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~ 159 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.+|++||++ +|..|..++..++..++
T Consensus 200 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~p~~--~G~~g~~~~~~~~~~l~ 270 (589)
T 2pgn_A 200 AQLVAAKNPVILAGGGVARSGGSEALLKLAEMVGVPVVTTST-G------AGVFPETHALA--MGSAGFCGWKSANDMMA 270 (589)
T ss_dssp HHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECTT-T------TTSSCTTSTTE--EEECSTTSCHHHHHHHH
T ss_pred HHHHhCCCeEEEECCCcccccHHHHHHHHHHHhCCCEEEccc-c------CccCCCCChhh--cCCccccCCHHHHHHHh
Confidence 999999999999999875 45568999999999999999998 5 79999999995 67777666666667788
Q ss_pred CCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccC-----C----CCChh
Q 041113 160 QFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQV-----P----HRSSK 230 (983)
Q Consensus 160 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~-----~----~~~~~ 230 (983)
+||+||+||+++.+..+. |....++.++||||.|+.+++++++.++.+.+|++.++++|.+.+. . .....
T Consensus 271 ~aDlvl~iG~~~~~~~~~-~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~~~~~~~~ 349 (589)
T 2pgn_A 271 AADFVLVLGSRLSDWGIA-QGYITKMPKFVHVDTDPAVLGTFYFPLLSVVADAKTFMEQLIEVLPGTSGFKAVRYQEREN 349 (589)
T ss_dssp HCSEEEEESCCCCTTTTT-TTTTCCCCSEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHHHHGGGSTTCCCCCGGGSTT
T ss_pred hCCEEEEECCCccccccc-ccccCCCCeEEEEeCCHHHHCCCcCCCEEEEeCHHHHHHHHHHHhhhcccccccccccchh
Confidence 999999999999877665 5322234579999999999999999999999999999999987664 1 12356
Q ss_pred HH--HHHHH-HHHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccC
Q 041113 231 WC--SFLRA-LDMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNS 307 (983)
Q Consensus 231 w~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~ 307 (983)
|. +.++. .++ .. .... .....++++..+++.|.+.++++++++.|+|+ +.+|..+++++ +.|++|+.
T Consensus 350 w~~~~~~~~~~~~-~~-~~~~-~~~~~~l~~~~~~~~l~~~l~~~~iv~~d~g~----~~~~~~~~~~~-~~~~~~~~-- 419 (589)
T 2pgn_A 350 FRQATEFRAAWDG-WV-REQE-SGDGMPASMFRAMAEVRKVQRPEDIIVTDIGN----HTLPMFGGAIL-QRPRRLVT-- 419 (589)
T ss_dssp HHHHHHHHHHHHH-HH-HHHT-CCCCSSCCHHHHHHHHHHTCCTTCEEEECSST----THHHHHHHCCC-SSTTCEES--
T ss_pred hccHHHHHHHHHH-HH-hhhc-cCCCCCcCHHHHHHHHHHhCCCCCEEEEcCch----HHHHHHHhccc-CCCCcEEC--
Confidence 77 55544 322 11 0111 00245799999999999999999999999999 44454444443 44554442
Q ss_pred CCCCcceeEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccC
Q 041113 308 EFPHQWIRVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSL 386 (983)
Q Consensus 308 ~~~~~~~~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~ 386 (983)
+.++|+||+ ++|+|+|+++|. +++||+++|||+|+|++|||+|+++ +++|+++||+||++|++++.
T Consensus 420 ---------~~g~g~mG~--~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~ta~~--~~l~~~ivv~nN~~~~~~~~ 486 (589)
T 2pgn_A 420 ---------SMAEGILGC--GFPMALGAQLAEPNSRVFLGTGDGALYYHFNEFRVAVE--HKLPVITMVFTNESYGANWT 486 (589)
T ss_dssp ---------CTTTCCTTC--HHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEECSBCHHHHH
T ss_pred ---------CCCcchhhh--HHHHHHHHHHhCCCCcEEEEEeeHHHHhhHHHHHHHHH--hCCCeEEEEEECCCcccchH
Confidence 467899999 999999999998 8999999999999999999999999 99999999999999999976
Q ss_pred CCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccch
Q 041113 387 LPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANA 456 (983)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~ 456 (983)
++... ...++.....++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++.++.
T Consensus 487 ~~~~~-----~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~liev~~~~~~~~ 551 (589)
T 2pgn_A 487 LMNHQ-----FGQNNWTEFMNPDWVGIAKAFGAYGESVRETGDIAGALQRAIDSGKPALIEIPVSKTQGL 551 (589)
T ss_dssp HHHHH-----HSSCCSCBCCCCCHHHHHHHHTCEEEECTTTCCHHHHHHHHHHHCSCEEEEEECCSSSST
T ss_pred HHHhh-----cCCCccccCCCCCHHHHHHHCCCeEEEECCHHHHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 42110 001111112368999999999999999999999999999999889999999999987643
No 112
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=100.00 E-value=1.2e-51 Score=498.78 Aligned_cols=401 Identities=14% Similarity=0.155 Sum_probs=306.8
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++++++|++.|.++|||||||+||.|++..+.... +. ...+... + .+.+..+.+++++
T Consensus 161 ~i~~~l~~A~~~A~~~r~GPV~l~iP~d~~~~~~~~~-----------~~-~~~~~~~------~--~~~~~~~~i~~~~ 220 (616)
T 2pan_A 161 LVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFD-----------PD-MYEPLPV------Y--KPAASRMQIEKAV 220 (616)
T ss_dssp GHHHHHHHHHHHHHSSSCCCEEEEEEHHHHHSEEECC-----------GG-GCCCCCC------C--CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEcchhhhhcccccc-----------cc-ccccccc------C--CCCCCHHHHHHHH
Confidence 4788999999999999999999999999643321000 00 0000000 0 0122366799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccC-cccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLS-ESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~-~~~~~~ 158 (983)
++|.+||||+||+|+|+. ..+.+++.+|||++|+||++|++ + ||.+|++||++ +|.+|..++. ..+..+
T Consensus 221 ~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~PV~~t~~-~------~g~~~~~hp~~--~G~~g~~~~~~~~~~~l 291 (616)
T 2pan_A 221 EMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLM-G------WGCIPDDHELM--AGMVGLQTAHRYGNATL 291 (616)
T ss_dssp HHHHTCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTT-T------TTSSCTTSTTB--CCCCSSSSCCHHHHHHH
T ss_pred HHHHcCCCeEEEECCCcCcccHHHHHHHHHHHhCCCEEEccc-c------CccCCCCCccc--cCCccccCCHHHHHHHH
Confidence 999999999999999875 44568999999999999999998 5 79999999995 7888877776 666778
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCC------CCChhHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVP------HRSSKWC 232 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~------~~~~~w~ 232 (983)
++||+||+||+++.+..+..+....+..++||||+|+.++++++++++.+.+|++.++++|.+.+.. .....|.
T Consensus 292 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~~~~~~~~~~~~~~~ 371 (616)
T 2pan_A 292 LASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEW 371 (616)
T ss_dssp HHCSEEEEESCCCCHHHHSSHHHHHTTCEEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHHHHHHHHTTCSCCCHHH
T ss_pred HhCCEEEEECCCCcccccCcccccCCCCeEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHHhhhcccccccccHHHH
Confidence 9999999999999764443232223455799999999999999999999999999999999875421 1234565
Q ss_pred HHHHHHHHHHHHHHHhhh--cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCC
Q 041113 233 SFLRALDMMVASEISFQI--CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFP 310 (983)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 310 (983)
+.+...+.. ..... ....++++..+++.|++.+|++++++.|.|+ +.+|..+++.+ ++|++|+
T Consensus 372 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~ivv~d~G~----~~~~~~~~~~~-~~~~~~~------ 436 (616)
T 2pan_A 372 VADCQQRKR----TLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGL----SQIAAAQMLHV-FKDRHWI------ 436 (616)
T ss_dssp HHHHHHHHT----TSEECCCCCCSSBCHHHHHHHHHHHSCTTEEEEECSSH----HHHHHHHHCCC-CSTTSEE------
T ss_pred HHHHHHHHh----hhhhccccCCCCcCHHHHHHHHHHhCCCCcEEEEcCcH----HHHHHHHhccc-CCCCeEE------
Confidence 443322211 11111 1235699999999999999999999999998 66676555543 4555444
Q ss_pred CcceeEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCC
Q 041113 311 HQWIRVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPI 389 (983)
Q Consensus 311 ~~~~~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~ 389 (983)
..+++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|+|++.++.
T Consensus 437 -----~~g~~G~~G~--~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~ta~~--~~l~~~ivv~NN~~~~~~~~~~~ 507 (616)
T 2pan_A 437 -----NCGQAGPLGW--TIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQ--FNIPYIHVLVNNAYLGLIRQSQR 507 (616)
T ss_dssp -----ECTTTCCTTC--HHHHHHHHHHHCTTCEEEEEEEHHHHHHTGGGHHHHHH--TTCCCEEEEEECSBCHHHHHHGG
T ss_pred -----cCCCcccccc--hHHHHHHHHHhCCCCcEEEEEcchhhhCCHHHHHHHHH--hCCCeEEEEEECCcchHHHHHHH
Confidence 3577899999 999999999998 8999999999999999999999999 99999999999999999876422
Q ss_pred CCCCC---ccccccccccC---CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc----cCCCEEEEEEcCccc
Q 041113 390 ADRTE---PRILDQYFYTT---HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQH----LGTDRVIEVESCIDA 454 (983)
Q Consensus 390 ~~~~~---~~~~~~~~~~~---~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~----~~~p~lIeV~~~~~~ 454 (983)
..... ...+...+.+. +.+||.++|++||+++++|++.+||.++|+++++ .++|+||||.+++.+
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 508 AFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp GGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred HhcCCccccccccccccccCCCCCCCHHHHHHHcCCeEEEECCHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 11000 00111111111 2589999999999999999999999999999987 799999999999876
No 113
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=2.3e-50 Score=465.96 Aligned_cols=373 Identities=17% Similarity=0.186 Sum_probs=277.6
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECC--CCEEEEeecCcCcCcccHHHHHHHHHHHHhHhcc
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLED--GSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTG 570 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~--G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g 570 (983)
|||++|+++.+++|++.|+..+.... ....++.++|+|+||+ |++||||+.+.+...+ .+...++.+.|.|+|
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~--~~~~~~~~~V~v~td~~~G~~G~Ge~~~~g~~~~---~v~~~i~~l~~~liG 76 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMN--PDPDYSAAYVVLRTDGAEDLAGYGLVFTIGRGND---VQTAAVAALAEHVVG 76 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSC--SSCCCEEEEEEEEESSCTTCEEEEEEEECSTTHH---HHHHHHHTTHHHHTT
T ss_pred CcEEEEEEEEEEecCCCCcCcccccc--cCCCcceEEEEEEECCCCCCEEEEeecCCCCCcH---HHHHHHHHHHHHHcC
Confidence 89999999999999999986654321 1122578999999998 9999999986543333 344556678999999
Q ss_pred CcccccccccccCchhhhhh-----hcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcccccccc------
Q 041113 571 AKISYFLPLLKGSFSSWIWS-----TLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISK------ 639 (983)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~------ 639 (983)
+++.++...+.... ..+.. ..+ +..+...+|++|||+|||||+||.+|+|||+||||..+ ..+..
T Consensus 77 ~d~~~~~~~~~~~~-~~l~~~~~~~~~~-~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGG~~~--~~~~~~~~~~~ 152 (441)
T 2hxt_A 77 LSVDKVIADLGAFA-RRLTNDSQLRWLG-PEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAELTP--EQLVDTIDFRY 152 (441)
T ss_dssp CBHHHHHHCHHHHH-HHHHTCHHHHHTC-SSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTSCH--HHHHHHCCCTT
T ss_pred CChHHHHhhHHHHH-HHHHhcccccccc-ccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCCCc--ccccccccccc
Confidence 99877543221110 11110 011 11233578999999999999999999999999999641 11100
Q ss_pred ----------------------------ccceeEEEEee--cCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHH
Q 041113 640 ----------------------------RSTSIKICALI--DSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAE 689 (983)
Q Consensus 640 ----------------------------~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~ 689 (983)
.++++|+|.+. +...+++++.+.+++++++||++||+|+|. +++.|++
T Consensus 153 ~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~--~~~~d~e 230 (441)
T 2hxt_A 153 LSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLKVGA--NVQDDIR 230 (441)
T ss_dssp CTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTTSCHHHHHHHHHHHHHTTCSEEEEECCS--CHHHHHH
T ss_pred cccccchhhhhhhhhcccccchhhhhhcccCCcceeEecccccCCCHHHHHHHHHHHHHcCCCEEEEccCC--CHHHHHH
Confidence 02468888753 123479999999999999999999999996 7899999
Q ss_pred HHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhc-CCcEEeCCCccCcCCCh
Q 041113 690 VIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEES-GLPVALDETIDKFQKDP 766 (983)
Q Consensus 690 ~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~-~ipIa~dEs~~~~~~~~ 766 (983)
+|++||+++|+++.|++|+|++|+.++|+++++.|+++++.|||||++ +++.+++|++++ ++||++||++++..+
T Consensus 231 ~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~-- 308 (441)
T 2hxt_A 231 RCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVV-- 308 (441)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHH--
T ss_pred HHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHH--
Confidence 999999999999999999999999999999999999999999999998 788999999987 699999999998753
Q ss_pred HHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccC
Q 041113 767 LNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNREL 845 (983)
Q Consensus 767 ~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~ 845 (983)
+..+++. .+|++++|++++|||+++++++++|+++|++++ +|+.+. ++++++|.++.++++. .
T Consensus 309 ---~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~-~h~~~~--~~~~~~~~~a~~~~~~----------~ 372 (441)
T 2hxt_A 309 ---FKQLLQAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRVF-PHAGGV--GLCELVQHLAMADFVA----------I 372 (441)
T ss_dssp ---HHHHHHHTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEEC-CCCCST--THHHHHHHHHHHHHHH----------T
T ss_pred ---HHHHHHcCCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeEE-EecChH--HHHHHHHHHHhcchhh----------c
Confidence 5666544 479999999999999999999999999999975 565444 4444443333222210 0
Q ss_pred CCCCccC-ccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhhhhccccc
Q 041113 846 CPPVAQG-LGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHILQNLQINN 897 (983)
Q Consensus 846 ~~~~~~g-~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~~~~~~~~ 897 (983)
.++.... +....++. +++.+|+.+++ +|++||||+++| ++.++++....
T Consensus 373 ~~~~~~~~~e~~~~~~-~~~~~~~~~~~G~i~~p~~PGlGve~d--~~~l~~~~~~~ 426 (441)
T 2hxt_A 373 TGKMEDRAIEFVDHLH-QHFLDPVRIQHGRYLAPEVPGFSAEMH--PASIAEFSYPD 426 (441)
T ss_dssp TCCCTTCCEEECCSSG-GGBSSCCCEETTEECCCCSSBCSCCBC--HHHHHHHBTTT
T ss_pred cccccCcceeechhhh-hhccCCccccCCeEECCCCCCCCcccC--HHHHHhccCCc
Confidence 0111000 00011233 33456787773 899999999999 88888888643
No 114
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.5e-51 Score=452.98 Aligned_cols=321 Identities=16% Similarity=0.175 Sum_probs=258.0
Q ss_pred EeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCccc
Q 041113 495 ICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAKIS 574 (983)
Q Consensus 495 I~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~~~ 574 (983)
+++++++.+++||+.||++|+++. +.++.++|+|+ |+|++|||||+|.++++++.+++...++.+.+.+...
T Consensus 4 ~r~l~~~~~r~pl~~pF~is~g~~----t~~~~v~V~i~-d~G~~G~GE~~p~~~~get~e~~~~~l~~~~~~~~~~--- 75 (329)
T 4gfi_A 4 PRYLQATTERFAVAGSFTISRGTR----THADVVTCTIR-DGSFTGIGECVPYPRYGESIEGVTADIEAMADRVAAG--- 75 (329)
T ss_dssp -CEEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEE-ETTEEEEEEECCCGGGTCCHHHHHHHHHTTHHHHHHT---
T ss_pred CcEEEEEEEEEeccCcEEccCeEE----EEeEEEEEEEE-ECCEEEEEeccCCCCCCcCHHHHHHHHHHHhhhhccc---
Confidence 379999999999999999999864 45899999996 6899999999998876788877776665554433221
Q ss_pred ccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecCCC
Q 041113 575 YFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDSNK 654 (983)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~ 654 (983)
...+.....+ ..++|++|||+||||+.||..|+|||+||||.. ++++++|+++. ..
T Consensus 76 --------~~~~~~~~~~------~~~~a~aaid~AlwDl~gk~~g~pl~~llgG~~---------~~~v~~~~~~~-~~ 131 (329)
T 4gfi_A 76 --------LTRQELQQVM------KPGAARNAVDCALWDLEAKMSGKRAAEQVLGQP---------AQPLVTAYTIS-LA 131 (329)
T ss_dssp --------CCHHHHHHHS------CSSHHHHHHHHHHHHHHHHHHSCCHHHHHHSSC---------CCCEECCEEEC-CC
T ss_pred --------cchhhHHhhc------ccHHHHHHHHHHHHHHHhhhcCCChhHHhCCCC---------CCceeeeeccc-CC
Confidence 1111111112 136899999999999999999999999999987 57889888874 56
Q ss_pred CHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeec
Q 041113 655 SPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEE 734 (983)
Q Consensus 655 ~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEe 734 (983)
+++++..++.+ ..||+.+|+|+|. .+|+++++++|+. |+++.||||||++||+++|+++++.|+++++.||||
T Consensus 132 ~~~~~~~~~~~--~~~~~~~Kik~g~----~~d~~~v~~vr~~-g~d~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEq 204 (329)
T 4gfi_A 132 DPDTMAAKTAE--NAGRPLLKIKTGT----ADDEARLRAVRAA-APEARIIIDANEGWNDDNIEYYLKLAAELKISLIEQ 204 (329)
T ss_dssp CHHHHHHHHHH--TTTSSEEEEECCS----SCCHHHHHHHHHH-CTTSEEEEECTTCCCTTTHHHHHHHHHHTTCCEEEC
T ss_pred ChHHHHHHHHh--hccccEEEecCCc----ccHHHHHHHHHHh-ccCCeEEEEcCCCCCHHHHHHHHHhhhhcCceEEEe
Confidence 77777766554 5799999999985 4588999999976 799999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC
Q 041113 735 PVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF 814 (983)
Q Consensus 735 P~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~ 814 (983)
|++..+....++.++++||++||++++..| +.... ..+|++|+|++++||++++++++++|+++|+++++||++
T Consensus 205 P~~~~~~~~~~~~~~~ipia~dEs~~~~~d-----~~~~~-~a~d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 278 (329)
T 4gfi_A 205 PLPAGKDAMLARIEHPVLICADESVHSTED-----LAGLR-DRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMVGCML 278 (329)
T ss_dssp CSCTTSCGGGGGSCCSSEEEESTTCCTGGG-----SGGGT-TTCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCccHHHHHHhcCCCCchhccCCCCHHH-----HHHHh-hccCeEEecCceeCCHHHHHHHHHHHHHCCCEEEECCcc
Confidence 998222223455678899999999999875 33333 357999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee---ccCCCCee
Q 041113 815 ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC---HNSCRGFV 879 (983)
Q Consensus 815 es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~---~~P~~pGl 879 (983)
||+|++++++|+|+..+++ .++++.++.+|+ .+++..+ .+|++|||
T Consensus 279 es~i~~aa~~~la~~~~~~------------------dld~~~~l~~d~-~~~~~~dG~~~~P~~PGL 327 (329)
T 4gfi_A 279 GTSLGMAPAVLVAQGTAFA------------------DLDGPLLLAEDR-DPGLVYEGSLVYPARPEL 327 (329)
T ss_dssp CCHHHHHHHHHHTTTCSEE------------------CCCHHHHBSSCC-SSCCCEETTEECCCCTTT
T ss_pred hhHHHHHHHHHHHhCCCee------------------ccCcchhhhccC-CCCcEEcCeEECCCCCCC
Confidence 9999999999999876532 245556677775 3344444 29999996
No 115
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.3e-50 Score=447.12 Aligned_cols=313 Identities=19% Similarity=0.230 Sum_probs=252.1
Q ss_pred eEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHh-ccCc
Q 041113 494 KICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFM-TGAK 572 (983)
Q Consensus 494 kI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l-~g~~ 572 (983)
||++|+++.+++||+.||.++.+.. ..++.++|+|+ ++|++||||+.+.++++++...+...+..+.|.+ .|.+
T Consensus 3 ~i~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~v~-d~G~~G~GE~~~~~~~g~~~~~~~~~i~~~~~~l~~~~~ 77 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSR----SEARVVVVELE-EEGIKGTGECTPYPRYGESDASVMAQIMSVVPQLEKGLT 77 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CC----SEEEEEEEEEE-ETTEEEEEEECCCGGGTCCHHHHHHHHHTTHHHHHTTCC
T ss_pred ceEEEEEEEEEecccccEEecCeeE----EEeeEEEEEEE-eCCceEEEEeeCCCCcCCCHHHHHHHHHHHHHHHhcCCC
Confidence 6889999999999999999988754 35889999999 7899999999987654565555555566677776 3555
Q ss_pred ccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC
Q 041113 573 ISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS 652 (983)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~ 652 (983)
+.++. ..+. ..+|++|||+||||+.||..|+|||+||||..+ +..++.|.. +
T Consensus 78 ~~~~~------------~~~~------~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~--------~~~~~~~~~--~ 129 (324)
T 1jpd_X 78 REELQ------------KILP------AGAARNALDCALWDLAARRQQQSLADLIGITLP--------ETVITAQTV--V 129 (324)
T ss_dssp HHHHH------------HHSC------SSHHHHHHHHHHHHHHHHTTTCCHHHHHTCCCC--------SEEEBCEEE--C
T ss_pred HHHHH------------HhCc------cHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCC--------CCcceeEEe--e
Confidence 44321 1111 358899999999999999999999999999751 233444443 3
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI 732 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 732 (983)
..+++++.+++++++++||++||+|+|. ++|++++++||+++ +++.|++|+|++|++++|+++++.|+++++.||
T Consensus 130 ~~~~e~~~~~a~~~~~~G~~~~KiKvg~----~~d~~~v~avr~~~-~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 204 (324)
T 1jpd_X 130 IGTPDQMANSASTLWQAGAKLLKVKLDN----HLISERMVAIRTAV-PDATLIVDANESWRAEGLAARCQLLADLGVAML 204 (324)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS----SCHHHHHHHHHHHC-TTSEEEEECTTCCCSTTHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCC----chHHHHHHHHHHhC-CCCEEEEECcCCCCHHHHHHHHHHHHhCCCCEE
Confidence 4589999999999999999999999985 46899999999999 899999999999999999999999999999999
Q ss_pred ecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEe
Q 041113 733 EEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVV 810 (983)
Q Consensus 733 EeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~ 810 (983)
|||++ +++.+++++ +++||++||++++..+ +..+++. ++++|+|++++||++++++++++|+++|+++++
T Consensus 205 EqP~~~~d~~~~~~l~--~~ipIa~dE~~~~~~~-----~~~~~~~-~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 276 (324)
T 1jpd_X 205 EQPLPAQDDAALENFI--HPLPICADESCHTRSN-----LKALKGR-YEMVNIKLDKTGGLTEALALATEARAQGFSLML 276 (324)
T ss_dssp ECCSCTTSCGGGGSSC--CSSCEEESTTCSSGGG-----HHHHBTT-BSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCCHHHHHhcc--CCCCEEEcCCCCCHHH-----HHHHHhh-CCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEE
Confidence 99999 556676664 7899999999998864 6666654 899999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceee
Q 041113 811 SAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISIC 871 (983)
Q Consensus 811 ~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~ 871 (983)
||++|++|++++++|+++.+.. +++++..++.+|+. +++.++
T Consensus 277 ~~~~es~i~~aa~~~la~~~~~------------------~~l~~~~~~~~d~~-~~~~~~ 318 (324)
T 1jpd_X 277 GCMLCTSRAISAALPLVPQVSF------------------ADLDGPTWLAVDVE-PALQFT 318 (324)
T ss_dssp CCCSCCHHHHHHHGGGGGGCSE------------------ECCCGGGGBSSCCS-SCCEEE
T ss_pred eCcchHHHHHHHHHHHhhcCCc------------------cCCCchhhhhccCC-CCcEEE
Confidence 9999999999999999986531 12344456777875 666654
No 116
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=100.00 E-value=2.3e-50 Score=483.52 Aligned_cols=405 Identities=15% Similarity=0.091 Sum_probs=298.4
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.+++||||||+||+|....+.... +. . . ........ . +...++++.+++++
T Consensus 144 ~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~~~~~~~~-~~--------~--~-~~~~~~~~-~---~~~~~~~~~i~~~~ 207 (568)
T 2c31_A 144 DIPIGIARAVRTAVSGRPGGVYVDLPAKLFGQTISVE-EA--------N--K-LLFKPIDP-A---PAQIPAEDAIARAA 207 (568)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEEEETHHHHCEEEHH-HH--------H--H-HCCCCSCS-S---CCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeCCHHHhhcccccc-cc--------c--c-ccccccCC-C---CCCCCCHHHHHHHH
Confidence 3688999999999999999999999998421110000 00 0 0 00000000 0 12245667899999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccC
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWI 159 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~ 159 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.+|++||++ +|.. .+..++
T Consensus 208 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~p~~--~G~~-------~~~~l~ 271 (568)
T 2c31_A 208 DLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGM-A------KGLLPDNHPQS--AAAT-------RAFALA 271 (568)
T ss_dssp HHHHTCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGG-G------TTSSCTTCTTB--CGGG-------HHHHHH
T ss_pred HHHHhCCCCEEEECcccccccHHHHHHHHHHHhCCCEEeccc-c------cccCCCCChhh--cchH-------HHhhhc
Confidence 999999999999999875 45568999999999999999998 5 79999999996 4542 234678
Q ss_pred CCCEEEEeCCccccHHHHHHHHhcC--CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCC--CChhHHHHH
Q 041113 160 QFDVIIQIGSRITSKRISQMIEECF--PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPH--RSSKWCSFL 235 (983)
Q Consensus 160 ~aDlvl~iG~~~~~~~~~~~~~~~~--~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~--~~~~w~~~~ 235 (983)
+||+||+||+++.+..+.++...+. ..++||||+|+.+++++++.++.+.+|++.++++|.+.+... ....|.+.+
T Consensus 272 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~~ii~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~w~~~~ 351 (568)
T 2c31_A 272 QCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKALKGAPKADAEWTGAL 351 (568)
T ss_dssp HCSEEEEESCCCSGGGGGGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred cCCEEEEECCCCccccccCcccccCCCCCeEEEEeCCHHHhcCCcCCCceeeCCHHHHHHHHHHhhhhcCCCcHHHHHHH
Confidence 9999999999997655544333443 457999999999999999999999999999999998876532 245687666
Q ss_pred HHHHHHHHHHHHhhh-cc--cCCCCHHHHHHHHHhhc--CCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCC
Q 041113 236 RALDMMVASEISFQI-CA--DYSLTEPHVAHELSRAL--TSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFP 310 (983)
Q Consensus 236 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~l--~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 310 (983)
...++.+........ .. ..++++..+++.|++.+ |++.+++.|.++. ..|...++.+ ..|++++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iv~~dg~~~----~~~~~~~~~~-~~p~~~~------ 420 (568)
T 2c31_A 352 KAKVDGNKAKLAGKMTAETPSGMMNYSNSLGVVRDFMLANPDISLVNEGANA----LDNTRMIVDM-LKPRKRL------ 420 (568)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCBCHHHHHHHHHHHHHHCCSSEEEEESSHH----HHHHHHHCCC-CSTTCEE------
T ss_pred HHHHHhhhhhhhhhhcccccCCCcCHHHHHHHHHHHhcCCCCeEEEECChhH----HHHHHHHhcc-cCCCeEE------
Confidence 554433222121111 12 35799999999999999 9898888887662 2222212221 3444433
Q ss_pred CcceeEeecCCCCCccchHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCC-ccccCCCC
Q 041113 311 HQWIRVAGNRGASGIDGLLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGG-AIFSLLPI 389 (983)
Q Consensus 311 ~~~~~~~~~~G~mG~~g~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~-g~~~~~~~ 389 (983)
.++++|+||+ |+|+|+|+++|.+++||+++|||||+|++|||+|+++ +++|++|||+||++| .+.... .
T Consensus 421 -----~~g~~g~~G~--~l~~AiGaala~~~~vv~i~GDGsf~~~~~el~ta~~--~~l~~~ivv~NN~~~~~~~~~~-~ 490 (568)
T 2c31_A 421 -----DSGTWGVMGI--GMGYCVAAAAVTGKPVIAVEGDSAFGFSGMELETICR--YNLPVTVIIMNNGGIYKGNEAD-P 490 (568)
T ss_dssp -----ESTTTTCSSC--HHHHHHHHHHHHCSCEEEEEEHHHHHTTGGGHHHHHH--TTCCEEEEEEESSBSSCSCCCC-S
T ss_pred -----cCCCCccccc--cHHHHHHHHhCCCCcEEEEEcchHhhccHHHHHHHHH--hCCCeEEEEEeCchhHHHHHHH-h
Confidence 3578899999 9999999999988999999999999999999999999 999999999999995 443210 0
Q ss_pred CCCCCccccccccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHHHHHHHH
Q 041113 390 ADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATFHSMLRK 464 (983)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~~~~~~~ 464 (983)
. ...+... . .+++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++.++++.....+.
T Consensus 491 --~--~~~~~~~-~-~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~~p~liev~~~~~~~~~~~~~~~~ 559 (568)
T 2c31_A 491 --Q--PGVISCT-R-LTRGRYDMMMEAFGGKGYVANTPAELKAALEEAVASGKPCLINAMIDPDAGVESGRIKSL 559 (568)
T ss_dssp --B--TTBCCTT-B-CCCCCHHHHHHTTTCEEEEESSHHHHHHHHHHHHHHTSCEEEEEEBCTTSSCC-------
T ss_pred --h--cCCcccC-c-CCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEEeccccCCCccccccc
Confidence 0 0011111 1 357999999999999999999999999999999988999999999999998877665554
No 117
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=100.00 E-value=1.1e-51 Score=490.99 Aligned_cols=390 Identities=14% Similarity=0.119 Sum_probs=298.8
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.++|||||||+||.|++..+.... . ...+.... . +...++++.+++++
T Consensus 134 ~~~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~--~-----------~~~~~~~~---~---~~~~~~~~~i~~~~ 194 (528)
T 1q6z_A 134 EVPHAMSRAIHMASMAPQGPVYLSVPYDDWDKDADPQ--S-----------HHLFDRHV---S---SSVRLNDQDLDILV 194 (528)
T ss_dssp GHHHHHHHHHHHHHSSSCCCEEEEEEGGGTTSBCCGG--G-----------GGGTTCCC---C---CCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEechhhhhCccccc--c-----------ccccccCC---C---CCCCCCHHHHHHHH
Confidence 3678999999999999999999999999765432110 0 00000000 0 11234567899999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccC
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWI 159 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~ 159 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||+++.++| ||+||++||++ +|.+| .++..++..++
T Consensus 195 ~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~~~g------~g~~~~~~p~~--~G~~g-~~~~~~~~~l~ 265 (528)
T 1q6z_A 195 KALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAP------RCPFPTRHPCF--RGLMP-AGIAAISQLLE 265 (528)
T ss_dssp HHHHHCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSCS------BCCSCTTSTTE--EEECC-SCHHHHHHHHT
T ss_pred HHHhcCCCeEEEECCccchhhHHHHHHHHHHHHCCCEEEeccCc------cccCCCCCccc--cCcCC-CCcHHHHHHHh
Confidence 999999999999999865 4456799999999999995555457 89999999995 78888 66666677889
Q ss_pred CCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 160 QFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 160 ~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
+||+||++|+++.+..+..|...++ +.++||||.|+.+++++ ++++.+.+|++.++++|.+.+.... .|...++
T Consensus 266 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~-~~~~~i~~d~~~~l~~L~~~~~~~~--~~~~~~~-- 340 (528)
T 1q6z_A 266 GHDVVLVIGAPVFRYHQYDPGQYLKPGTRLISVTCDPLEAARA-PMGDAIVADIGAMASALANLVEESS--RQLPTAA-- 340 (528)
T ss_dssp TCSEEEEESSCTTCCCSCCCSCSSCTTCEEEEEESCHHHHHHC-SSSEEEESCHHHHHHHHHHHSCCCC--SCCCCCC--
T ss_pred cCCEEEEECCCCccccccCcCCcCCCCCeEEEEeCCHHHhCCC-CCCeeEeCCHHHHHHHHHHHhhccc--cchHHHH--
Confidence 9999999999998777655543333 45799999999999888 8999999999999999998764321 1211000
Q ss_pred HHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 239 DMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
...........++++..+++.|++.+|++++++.|+|+. ..|...++.. ..|++|+ .+.
T Consensus 341 -----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~----~~~~~~~~~~-~~~~~~~-----------~~~ 399 (528)
T 1q6z_A 341 -----PEPAKVDQDAGRLHPETVFDTLNDMAPENAIYLNESTST----TAQMWQRLNM-RNPGSYY-----------FCA 399 (528)
T ss_dssp -----CCCCCCCCCSSSBCHHHHHHHHHHHSCTTCEEEEECTTS----HHHHHHHCCC-CSSSCEE-----------ECT
T ss_pred -----hhhhcccccCCCcCHHHHHHHHHhhCCCCeEEEECCccc----HHHHHHhccc-cCCCcEE-----------CCC
Confidence 000000012356999999999999999999999999994 4444333332 3344333 345
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
+ |+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|++++.++.. ..
T Consensus 400 g-g~~G~--~l~~A~G~a~a~~~~~vv~~~GDG~~~~~~~~l~~a~~--~~l~~~ivv~nN~~~~~~~~~~~~-----~~ 469 (528)
T 1q6z_A 400 A-GGLGF--ALPAAIGVQLAEPERQVIAVIGDGSANYSISALWTAAQ--YNIPTIFVIMNNGTYGALRWFAGV-----LE 469 (528)
T ss_dssp T-CCTTS--HHHHHHHHHHHCTTSCEEEEEEHHHHTTTGGGHHHHHH--HTCCCEEEEEECSBCHHHHHHHHH-----HT
T ss_pred C-ccccc--hHHHHHHHHHhCCCCcEEEEECCcHHHhhHHHHHHHHH--hCCCeEEEEEeCCcchHhHHHHHH-----hc
Confidence 6 99999 999999999998 8999999999999999999999999 999999999999999998764211 00
Q ss_pred cccccccC-CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCccc
Q 041113 398 LDQYFYTT-HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDA 454 (983)
Q Consensus 398 ~~~~~~~~-~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~ 454 (983)
..++.++. +++||.++|++||+++++|++.+||+++|+++++.++|+||||.++++.
T Consensus 470 ~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~~~ 527 (528)
T 1q6z_A 470 AENVPGLDVPGIDFRALAKGYGVQALKADNLEQLKGSLQEALSAKGPVLIEVSTVSPV 527 (528)
T ss_dssp CCSCCSCBCCCCCHHHHHHHHTCEEEEESSHHHHHHHHHHHHTCSSCEEEEEEBCC--
T ss_pred CCCcccCCCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHHCCCcEEEEEEecCCC
Confidence 11122222 5789999999999999999999999999999998899999999999764
No 118
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=100.00 E-value=2.8e-49 Score=437.75 Aligned_cols=302 Identities=23% Similarity=0.386 Sum_probs=256.4
Q ss_pred eEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHH-HHhHhccC
Q 041113 494 KICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRF-LLHFMTGA 571 (983)
Q Consensus 494 kI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~-~~~~l~g~ 571 (983)
||++|+++.+++||+.||.++.+.. ..++.++|||+|+ |++||||+.+.+ +++++...+...++. +.|.+.|+
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~----~~~~~~~V~i~td-G~~G~GE~~~~~~~~~e~~~~~~~~l~~~~~~~l~g~ 76 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRL----KTRDGLYVCLREG-EREGWGEISPLPGFSQETWEEAQSVLLAWVNNWLAGD 76 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBC----CEEEEEEEEEEET-TEEEEEEECCCTTTCSSCHHHHHHHHHHHHHHHTTSC
T ss_pred cceEEEEEEEEEeccCCeEeccEEE----EeeeEEEEEEEEC-CeEEEEEecCCCCCCccCHHHHHHHHHHHHHHhhCCh
Confidence 7999999999999999999988754 4589999999986 999999999875 446676666666654 66788885
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
.+ + . + .++|++|||+||||+.||..|+|+++ ++++|
T Consensus 77 --~~----l--------------~--~-~~~a~~aid~ALwDl~gk~~g~p~~~-----------------~v~~~---- 112 (322)
T 1r6w_A 77 --CE----L--------------P--Q-MPSVAFGVSCALAELTDTLPQAANYR-----------------AAPLC---- 112 (322)
T ss_dssp --CC----C--------------C--S-SHHHHHHHHHHHHHHTTCSCCCSCCC-----------------CCCEE----
T ss_pred --hh----c--------------c--c-ChHHHHHHHHHHHHhcCCCCCCCccc-----------------eEEEe----
Confidence 21 0 0 1 46899999999999999999988752 25554
Q ss_pred CCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC---C
Q 041113 652 SNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC---D 728 (983)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~---~ 728 (983)
..+++++.++++++ +||++||+|+|.. ++++|+++++++|+++ +++.||+|+|++||.++|+++++.|+++ +
T Consensus 113 -~~~~~~~~~~a~~~--~G~~~~KiKvG~~-~~~~d~~~v~avr~~~-~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~ 187 (322)
T 1r6w_A 113 -NGDPDDLILKLADM--PGEKVAKVRVGLY-EAVRDGMVVNLLLEAI-PDLHLRLDANRAWTPLKGQQFAKYVNPDYRDR 187 (322)
T ss_dssp -CSCHHHHHHHHHTC--CSSEEEEEECSSS-CHHHHHHHHHHHHHHC-TTEEEEEECTTCBCHHHHHHHHHTSCTTTGGG
T ss_pred -CCCHHHHHHHHHHh--CCCceEEEEeCCC-CHHHHHHHHHHHHHhC-CCCeEEEeCCCCCCHHHHHHHHHHhhhhccCC
Confidence 25788888888775 7999999999973 7899999999999999 7999999999999999999999999999 9
Q ss_pred CceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcE
Q 041113 729 LQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMA 808 (983)
Q Consensus 729 i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~ 808 (983)
+.|||||+++++++++|++++++||++||++.+. + +..+...++|++|+|++++||++++++++++|+++|+++
T Consensus 188 i~~iEqP~~~~~~~~~l~~~~~ipIa~dE~~~~~-~-----~~~~~~~a~d~i~ik~~~~GGit~~~~ia~~A~~~gi~~ 261 (322)
T 1r6w_A 188 IAFLEEPCKTRDDSRAFARETGIAIAWDESLREP-D-----FAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTA 261 (322)
T ss_dssp EEEEECCBSSHHHHHHHHHHHCCCEEESGGGGST-T-----CCCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEE
T ss_pred eeEEECCCCChHHHHHHHHhCCCCEEeCCCCCCh-h-----HhhhhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCcE
Confidence 9999999998899999999999999999999983 3 322233457999999999999999999999999999999
Q ss_pred EeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCcee
Q 041113 809 VVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISI 870 (983)
Q Consensus 809 ~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~ 870 (983)
++||++||+||.++++|+++++++ ...+|+++..||.+|++.+++..
T Consensus 262 ~~~~~~es~ig~aa~~hlaa~~~~---------------~~~~~l~t~~~~~~d~~~~~~~~ 308 (322)
T 1r6w_A 262 VISSSIESSLGLTQLARIAAWLTP---------------DTIPGLDTLDLMQAQQVRRWPGS 308 (322)
T ss_dssp EEBCSSCCHHHHHHHHHHHHHHCT---------------TSCCBCTTGGGBSCEESSCCTTC
T ss_pred EEECccccHHHHHHHHHHHHhcCC---------------CCccCCCchhhhhhccccCCccc
Confidence 999999999999999999998863 34567899999999988777644
No 119
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=100.00 E-value=7e-51 Score=487.92 Aligned_cols=404 Identities=15% Similarity=0.136 Sum_probs=310.4
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.+++ |||||+||+|++..+... .+...... ....+.+.++.+.+++++
T Consensus 143 ~~~~~l~~A~~~A~~~~-GPV~l~iP~dv~~~~~~~-----------------~~~~~~~~-~~~~~~~~~~~~~i~~~~ 203 (568)
T 2wvg_A 143 EAPAKIDHVIKTALREK-KPVYLEIACNIASMPCAA-----------------PGPASALF-NDEASDEASLNAAVEETL 203 (568)
T ss_dssp GHHHHHHHHHHHHHHHT-CCEEEEEEGGGTTSEECE-----------------ECCTHHHH-CCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCEEEEechhHhcCcccC-----------------CCcccccc-cCCCCCccccHHHHHHHH
Confidence 36789999999999987 999999999975432210 00000000 000011224456799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-hhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-DHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-g~~~~~~~~~~~ 158 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||+||++||++ +|.+ |..+....+..+
T Consensus 204 ~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------kg~~~~~~p~~--~G~~~g~~~~~~~~~~l 274 (568)
T 2wvg_A 204 KFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMAA-A------KSFFPEENPHY--IGTSWGEVSYPGVEKTM 274 (568)
T ss_dssp HHHTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGG-G------TTSSCTTSTTE--EEEECGGGSCTTHHHHH
T ss_pred HHHHhCCCCEEEECccccccchHHHHHHHHHHhCCCEEEchh-c------CccCCCCCCce--eccccCCcCCHHHHHHH
Confidence 999999999999999986 45678999999999999999998 5 79999999996 6764 666777777778
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||++|+++.+..+..|....++.++||||.|+.++++++.. ..+++.++++|.+.+.. ....|. .+...
T Consensus 275 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~----~~~~~~~l~~L~~~l~~-~~~~~~-~~~~~ 348 (568)
T 2wvg_A 275 KEADAVIALAPVFNDYSTTGWTDIPDPKKLVLAEPRSVVVNGIRFP----SVHLKDYLTRLAQKVSK-KTGALD-FFKSL 348 (568)
T ss_dssp HHCSEEEEESCCCBTTTTTTTTCCCCTTTEEEECSSEEEETTEEEE----SCCHHHHHHHHHHHCCC-CCHHHH-HHHHT
T ss_pred HhCCEEEEECCCcccccccccccCCCCCcEEEEeCChhhcCCeecC----CCCHHHHHHHHHHhccc-cccchh-hhhhh
Confidence 8999999999999877776565433445799999999988765443 34689999999987643 233453 22211
Q ss_pred HHHHHHHHHhhhc-ccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEe
Q 041113 239 DMMVASEISFQIC-ADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVA 317 (983)
Q Consensus 239 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 317 (983)
.+. ........ .+.++++..+++.|++.+|++++++.|.|+.. |...+++. .+|++|+ .+
T Consensus 349 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~~~-----~~~~~~~~-~~~~~~~-----------~~ 409 (568)
T 2wvg_A 349 NAG--ELKKAAPADPSAPLVNAEIARQVEALLTPNTTVIAETGDSW-----FNAQRMKL-PNGARVE-----------YE 409 (568)
T ss_dssp TCC--SCCCCCCCCTTSBCCHHHHHHHHHTTCCTTEEEEECSSHHH-----HHHHTCCC-CTTCEEE-----------CC
T ss_pred hhh--cccccccCCCCCccCHHHHHHHHHHhCCCCCEEEEcCcHHH-----HHHhhccc-CCCCeEE-----------eC
Confidence 100 00000011 23469999999999999999999999999832 33333332 3344443 24
Q ss_pred ecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCcc
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPR 396 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~ 396 (983)
+++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|+|++.++.
T Consensus 410 ~~~g~~G~--~l~~A~G~ala~~~~~vv~i~GDGs~~~~~~el~ta~~--~~l~~~ivv~NN~~~~~~~~~~~------- 478 (568)
T 2wvg_A 410 MQWGHIGW--SVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVR--LKLPVIIFLINNYGYTIEVMIHD------- 478 (568)
T ss_dssp TTTCCTTT--HHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEECSSCHHHHTTSC-------
T ss_pred CCcchhhh--HHHHHHHHHHhCCCCcEEEEEcChhHhccHHHHHHHHH--cCCCcEEEEEECCcceEeeeecc-------
Confidence 67899999 999999999998 8999999999999999999999999 99999999999999999986421
Q ss_pred ccccccccCCCCCHHHHHHHcCC---------ceeeeCCHHHHHHHHHhhhcc-CCCEEEEEEcCcccchHHHHHHHHHH
Q 041113 397 ILDQYFYTTHNISIQNLCLAHGL---------NHVQVKTKVELEEALSMSQHL-GTDRVIEVESCIDANATFHSMLRKFA 466 (983)
Q Consensus 397 ~~~~~~~~~~~~df~~la~a~G~---------~~~~v~~~~eL~~aL~~a~~~-~~p~lIeV~~~~~~~~~~~~~~~~~~ 466 (983)
..+.+.+++||.++|++||+ ++++|++.+||+++|+++++. ++|.||||.+++++.+..++++.+.+
T Consensus 479 ---~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~liev~~~~~~~~~~~~~~~~~~ 555 (568)
T 2wvg_A 479 ---GPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGELAEAIKVALANTDGPTLIECFIGREDCTEELVKWGKRV 555 (568)
T ss_dssp ---CGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEESBHHHHHHHHHHHHHCCSSCEEEEEECCTTCCCHHHHHHHHHH
T ss_pred ---CCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeCCHHHHHHHHHHHHhcCCCcEEEEEEcCccccCHHHHHHHHHh
Confidence 11234467999999999999 899999999999999999987 89999999999999999999988876
Q ss_pred HHHHH
Q 041113 467 RQSAD 471 (983)
Q Consensus 467 ~~~~~ 471 (983)
.+...
T Consensus 556 ~~~~~ 560 (568)
T 2wvg_A 556 AAANS 560 (568)
T ss_dssp HHHHH
T ss_pred Hhhcc
Confidence 65533
No 120
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=100.00 E-value=6.4e-51 Score=488.03 Aligned_cols=399 Identities=14% Similarity=0.097 Sum_probs=309.8
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.|++|++.|.+++ |||||+||.|++..+.... ...+.... ... +.+.++.+.+++++
T Consensus 143 ~~~~~l~~A~~~a~~~~-GPV~l~iP~d~~~~~~~~~--------------~~~~~~~~-~~~---~~~~~~~~~i~~~~ 203 (566)
T 2vbi_A 143 SAPAKIDHVIRTALRER-KPAYLDIACNIASEPCVRP--------------GPVSSLLS-EPE---IDHTSLKAAVDATV 203 (566)
T ss_dssp SHHHHHHHHHHHHHHHT-CCEEEEEETTTTTSBCCEE--------------CCCSCSCC-CBC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCEEEEechhhcCCeecCC--------------CCCcccCC-CCC---CCcchHHHHHHHHH
Confidence 46789999999999986 9999999999765432100 00010000 000 11223456799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-hhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-DHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-g~~~~~~~~~~~ 158 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.||++||++ +|.+ |..+...++..+
T Consensus 204 ~~l~~a~rpvi~~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~p~~--~G~~~g~~~~~~~~~~l 274 (566)
T 2vbi_A 204 ALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAA-A------KGFFPEDHAGF--RGLYWGEVSNPGVQELV 274 (566)
T ss_dssp HHHHTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGG-G------TTSSCTTSTTE--EEEECGGGSCTTHHHHH
T ss_pred HHHHhCCCCEEEECcCccccchHHHHHHHHHHhCCCEEEccc-c------CccCCCCCccc--cccccCccCCHHHHHHH
Confidence 999999999999999986 45678999999999999999998 5 79999999996 6775 666777777788
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||++|+++.+..+..|....++.++||||.|+.++++++..+ .+++.++++|.+.+... ...|. .+...
T Consensus 275 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~----~~~~~~l~~L~~~l~~~-~~~~~-~~~~~ 348 (566)
T 2vbi_A 275 ETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDG----FTLRAFLQALAEKAPAR-PASAQ-KSSVP 348 (566)
T ss_dssp HTCSEEEEESCCCBTTTTTTTTSCCCSTTEEEECSSEEEETTEEEES----SCHHHHHHHHHHHCCCC-CHHHH-TSCCC
T ss_pred HhCCEEEEECCCccccccccccccCCCCcEEEEeCChheeCCcccCC----ccHHHHHHHHHHhcccc-ccchh-hhhhh
Confidence 99999999999998887766654434557999999999888654433 35899999998876432 23442 12110
Q ss_pred HHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 239 DMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
.. ... ....+.++++..+++.|++.+|++++++.|.|+ + .|...+++. ..|++|+ .++
T Consensus 349 ~~----~~~-~~~~~~~l~~~~~~~~l~~~l~~~~iv~~d~G~----~-~~~~~~~~~-~~~~~~~-----------~~~ 406 (566)
T 2vbi_A 349 TC----SLT-ATSDEAGLTNDEIVRHINALLTSNTTLVAETGD----S-WFNAMRMTL-PRGARVE-----------LEM 406 (566)
T ss_dssp CC----CCC-CCCTTSCCCHHHHHHHHHHHCCTTEEEEECSSH----H-HHHHHTCCC-CTTCEEE-----------CCT
T ss_pred hh----ccC-CCCCCCccCHHHHHHHHHHhcCCCCEEEECCch----H-HHhhhheEC-CCCCEEE-----------ecC
Confidence 00 000 011234699999999999999999999999998 3 244444332 3344443 246
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|+|++.++.
T Consensus 407 ~~g~mG~--~l~~A~G~ala~~~~~vv~~~GDG~~~~~~~eL~ta~~--~~l~~~ivv~nN~~~~~~~~~~~-------- 474 (566)
T 2vbi_A 407 QWGHIGW--SVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVR--YELPVIIFLINNRGYVIEIAIHD-------- 474 (566)
T ss_dssp TTCCTTT--HHHHHHHHHHTCTTSEEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEECSSCHHHHTTSC--------
T ss_pred cccchhh--HHHHHHHHHHhCCCCcEEEEEcchHHHhhHHHHHHHHH--hCCCcEEEEEECCcceEEEeecc--------
Confidence 7899999 999999999998 8999999999999999999999999 99999999999999999976421
Q ss_pred cccccccCCCCCHHHHHHHcCC-----ceeeeCCHHHHHHHHHhhhcc-CCCEEEEEEcCcccchHHHHHHHHHHHHH
Q 041113 398 LDQYFYTTHNISIQNLCLAHGL-----NHVQVKTKVELEEALSMSQHL-GTDRVIEVESCIDANATFHSMLRKFARQS 469 (983)
Q Consensus 398 ~~~~~~~~~~~df~~la~a~G~-----~~~~v~~~~eL~~aL~~a~~~-~~p~lIeV~~~~~~~~~~~~~~~~~~~~~ 469 (983)
..+.+.+++||.++|++||+ ++++|++.+||+++|+++++. ++|.||||.+++++.+..++++.+.+.+.
T Consensus 475 --~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~liev~~~~~~~~~~~~~~~~~~~~~ 550 (566)
T 2vbi_A 475 --GPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVAST 550 (566)
T ss_dssp --CGGGCCCCCCTTTHHHHHHTTTCCCEEEEECSHHHHHHHHHHHHHCCSSCEEEEEECCTTCCCHHHHHHHHHHHHH
T ss_pred --CCccCCCCCCHHHHHHHcCCCCCCccEEEeCCHHHHHHHHHHHHhcCCCcEEEEEEeCcccCcHHHHHHHHHhhhh
Confidence 12334467999999999999 999999999999999999987 99999999999999999999988876655
No 121
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=100.00 E-value=9.6e-49 Score=435.34 Aligned_cols=306 Identities=19% Similarity=0.207 Sum_probs=238.5
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc-CcccHHHHHHHHHHHHhHhccC
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI-HKENLLDAEEQLRFLLHFMTGA 571 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~-~~~~~~~~~~~l~~~~~~l~g~ 571 (983)
|||+ ++.+++||+.||.++ +.. +.++.++|||+|++|++||||+.+.+. +.+++.. .+. +.+.
T Consensus 2 MkI~---~~~~~~pl~~p~~~s-~~~----~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~---~l~---~~ll-- 65 (330)
T 3caw_A 2 IKIS---YSPYTLKPVQSLNAA-TAA----TAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEE---QLS---DLRM-- 65 (330)
T ss_dssp -CEE---EEEEEECBC---------------CEEEEEEEEECTTSCEEEEEECCCGGGTCCCHHH---HHH---HHHH--
T ss_pred cEEE---EEEEEeecCCCeEee-eEE----EEeeEEEEEEEECCCCEEEEeecCCCCcCcccHHH---HHH---HHHh--
Confidence 8999 889999999999998 654 448999999999999999999988653 4555432 222 1110
Q ss_pred cccccccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeec
Q 041113 572 KISYFLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALID 651 (983)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~ 651 (983)
+ ...++|++|||+||||++||..|+|||+ || . +|++|++++
T Consensus 66 ---------------------~----~~~~~a~said~AlwDl~gk~~g~Pl~~--Gg-~-----------~v~~~~~~~ 106 (330)
T 3caw_A 66 ---------------------G----RMTTQIEQSIWLARRDALLRKEKKHVFD--GG-E-----------KIKNNYLLS 106 (330)
T ss_dssp ---------------------T----CCCHHHHHHHHHHHHHHHHHHTTCBTTT--TS-C-----------CCCBCEEEC
T ss_pred ---------------------c----cchHHHHHHHHHHHHHHHHHHcCCcccc--CC-C-----------ceEEEEEec
Confidence 1 1246899999999999999999999999 77 3 377788774
Q ss_pred CC--CCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhccc---
Q 041113 652 SN--KSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKD--- 726 (983)
Q Consensus 652 ~~--~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~--- 726 (983)
.. .+++++. +++++||++||+|+|. ++++|+++|++||+ +++.||+|+|++||+++|+++++.|++
T Consensus 107 ~~~~~~~~~~~----~~~~~G~~~~KiKvg~--~~~~d~~~v~avr~---~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~ 177 (330)
T 3caw_A 107 HFQDLKPGFLD----GLKNEGYNTVKVKMGR--DLQKEADMLTHIAA---SGMRMRLDFNALGSWQTFEKFMVNLPLTVR 177 (330)
T ss_dssp TTSCCCTTHHH----HHHHHTCCEEEEECSS--CHHHHHHHHHHHHH---TTCEEEEECTTCSCHHHHHHHHHTSCTTTG
T ss_pred CCCCCCHHHHH----HHHHcCCcEEEEecCC--CHHHHHHHHHHHhC---CCCeEEEECCCCCCHHHHHHHHHHhhhhcc
Confidence 23 5677666 6667899999999997 78999999999999 899999999999999999999999999
Q ss_pred CCCceeecCCCChH-HHH-HHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 727 CDLQYIEEPVQNEE-DII-KYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 727 ~~i~~iEeP~~~~~-~~~-~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
+++.|||||++ .+ ++. .|+ ++ +|||+||+ +..+ +..+++.+ +|++|+|++++ |++ +++++|++
T Consensus 178 ~~l~~iEqP~~-~~~d~~~~l~-~~-iPIa~dEs--~~~~-----~~~~i~~~a~d~v~~k~~~~-Gi~---~i~~~A~~ 243 (330)
T 3caw_A 178 PLIEYVEDPFP-FDFHAWGEAR-KL-AKIALDNQ--YDKV-----PWGKIASAPFDVIVIKPAKT-DVD---KAVAQCQK 243 (330)
T ss_dssp GGEEEEECCSS-CCHHHHHHHT-TT-SCEEESTT--GGGC-----CTTTCSSCSCSEEEECTTTS-CHH---HHHHHHHH
T ss_pred CCceEEECCCC-CCccHHHHHH-hc-CcEEeCCC--CHHH-----HHHHHHcCCCCEEEechhhc-cHH---HHHHHHHH
Confidence 99999999998 33 322 277 88 99999999 6654 56666544 79999999999 999 99999999
Q ss_pred cCCcEEeCCCCchHHHHHHHHHHHh----hchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCC
Q 041113 804 HGKMAVVSAAFESGLGLSAYIIFSS----YLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSC 875 (983)
Q Consensus 804 ~gi~~~~~~~~es~ig~~a~~~laa----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~ 875 (983)
+|+++++|+++||+||.++++|+++ +++|.. .....+++.. +.+|++.+|+.+++ +|+
T Consensus 244 ~gi~~~~~~~~es~ig~aa~~hlaa~~~~a~~~~~-------------~~~~dl~~~~-~~~d~~~~~~~~~~G~~~~p~ 309 (330)
T 3caw_A 244 WNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMI-------------LESGCLTHRL-YQMDSFAAELSTQGPYLLKNK 309 (330)
T ss_dssp TTCEEEEBCCSCCHHHHHHHHHHHHHHHHHHGGGB-------------CCBBCCCGGG-BCCCTTGGGCCEETTEECCCS
T ss_pred cCCcEEEeCccCcHHHHHHHHHHHccchhcCCCcc-------------cccccCCchh-hhcccccCCceeECCEEECCC
Confidence 9999999999999999999999999 888531 0111133333 36788778888874 899
Q ss_pred CCeeeEEecchhhhhhhccc
Q 041113 876 RGFVEASVAKATHILQNLQI 895 (983)
Q Consensus 876 ~pGlGv~~d~a~~~~~~~~~ 895 (983)
+||||++ +.++++..
T Consensus 310 ~PGlGv~-----~~~~~~~~ 324 (330)
T 3caw_A 310 GTGVGFD-----KLLEALTW 324 (330)
T ss_dssp SSBTSCH-----HHHHTSCC
T ss_pred CCCCCHH-----HHHHHhhh
Confidence 9999997 35566553
No 122
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=100.00 E-value=7.8e-50 Score=478.84 Aligned_cols=400 Identities=15% Similarity=0.093 Sum_probs=296.2
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.+++||||||+||+|....+... . .+.. ........ . +...++++.+++++
T Consensus 142 ~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~~~~~~~--~--------~~~~--~~~~~~~~-~---~~~~~~~~~i~~~~ 205 (564)
T 2q28_A 142 DLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEK--D--------EALT--TIVKVENP-S---PALLPCPKSVTSAI 205 (564)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEEEEHHHHHCEEEH--H--------HHHH--TCCCCSCS-S---CCEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEcCHHHhhccccc--c--------cccc--ccccccCC-C---CCCCCCHHHHHHHH
Confidence 368899999999999999999999999842111000 0 0000 00000000 0 11235667899999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccC
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWI 159 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~ 159 (983)
++|++||||+|++|+++. .++.+++.+|||++|+||++|++ | ||++|++||++ +|.. .+..++
T Consensus 206 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~hp~~--~G~~-------~~~~l~ 269 (564)
T 2q28_A 206 SLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSM-A------KGILEDTHPLS--AAAA-------RSFALA 269 (564)
T ss_dssp HHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGG-G------TTSSCTTCTTB--CGGG-------HHHHHH
T ss_pred HHHHcCCCcEEEECcccccccHHHHHHHHHHHhCCCEEeccC-c------cccCCCCChhh--cChH-------HHhHhh
Confidence 999999999999999875 45568999999999999999998 5 79999999996 4542 234678
Q ss_pred CCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCC---CCChhHHHHH
Q 041113 160 QFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVP---HRSSKWCSFL 235 (983)
Q Consensus 160 ~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~---~~~~~w~~~~ 235 (983)
+||+||++|+++.+..+.++ ..+. ..++||||+|+.+++++++.++.+.+|++.+|++|.+.+.. .....|.+.+
T Consensus 270 ~aDlvl~iG~~~~~~~~~~~-~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~~~~~~~~~w~~~~ 348 (564)
T 2q28_A 270 NADVVMLVGARLNWLLAHGK-KGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDIL 348 (564)
T ss_dssp HCSEEEEESCCCSGGGGGGT-TTSCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred cCCEEEEECCcccccccccc-cccCCCCeEEEEeCCHHHhcCCCCCCeEEEcCHHHHHHHHHHHhhhcCcCCcHHHHHHH
Confidence 99999999999975444333 3333 35799999999999999999999999999999999876532 1245687766
Q ss_pred HHHHHHHHHHHHhhh-cccCCCCHHHHHHHHHhhc--CCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCc
Q 041113 236 RALDMMVASEISFQI-CADYSLTEPHVAHELSRAL--TSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQ 312 (983)
Q Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l--~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 312 (983)
+..++.+........ ....++++..+++.|++.+ |++.+++.|.++.+ .|...++.+ ..|++++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~d~ivv~dg~~~~----~~~~~~~~~-~~p~~~~-------- 415 (564)
T 2q28_A 349 NIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTL----DNARNIIDM-YKPRRRL-------- 415 (564)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSBCHHHHHHHHHHHHTTCTTCEEEEESSHHH----HHHHHHSCC-CSSSCEE--------
T ss_pred HHHHHhhhhhhhhhhccCCCCcCHHHHHHHHHHHhcCCCCEEEEECCchHH----HHHHHHhcc-cCCCeEe--------
Confidence 554443322221111 1245799999999999999 88888888866522 122111221 3344332
Q ss_pred ceeEeecCCCCCccchHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCC-ccccCCCCCC
Q 041113 313 WIRVAGNRGASGIDGLLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGG-AIFSLLPIAD 391 (983)
Q Consensus 313 ~~~~~~~~G~mG~~g~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~-g~~~~~~~~~ 391 (983)
.++++|+||+ |+|+|+|+++|.+++||+++|||||+|++|||+|+++ |++|+++||+||++| ++......
T Consensus 416 ---~~g~~g~~G~--~l~~AiGaa~a~~~~vv~i~GDGsf~~~~~el~ta~~--~~l~~~ivv~NN~~~~~~~~~~~~-- 486 (564)
T 2q28_A 416 ---DCGTWGVMGI--GMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICR--YNLPVTIVIFNNGGIYRGDGVDLS-- 486 (564)
T ss_dssp ---ESTTTTCTTC--HHHHHHHHHHHHCSCEEEEEEHHHHHTTGGGHHHHHH--TTCCEEEEEEECSBSSCSCCCCTT--
T ss_pred ---cCCCCCcccc--hHHHHHHHhhcCCCcEEEEEcchHhhccHHHHHHHHH--hCCCeEEEEEeCchhHHHHHHHHh--
Confidence 3578899999 9999999999988999999999999999999999999 999999999999995 55432100
Q ss_pred CCCccccccccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHH
Q 041113 392 RTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATF 458 (983)
Q Consensus 392 ~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~ 458 (983)
. ...+.. ....+++||.++|++||+++++|++.+||+++|+++++.++|+||||.+++.++++.
T Consensus 487 ~--~~~~~~-~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~~p~liev~~~~~~~~~~ 550 (564)
T 2q28_A 487 G--AGAPSP-TDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTES 550 (564)
T ss_dssp S--SCCCCT-TBCCTTCCGGGGGGGGTCEEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCTTSSCCC
T ss_pred c--cCCccc-cccCCCCCHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEEeccccCCCc
Confidence 0 000111 112357899999999999999999999999999999988999999999998876643
No 123
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=100.00 E-value=2.1e-50 Score=482.78 Aligned_cols=399 Identities=16% Similarity=0.124 Sum_probs=303.6
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.+++ |||||+||.|++..+.... ..+.... . +. +.+.++.+.+++++
T Consensus 144 ~~~~~i~~A~~~a~~~~-GPV~l~iP~d~~~~~~~~~---------------~~~~~~~-~-~~--~~~~~~~~~i~~~~ 203 (552)
T 1ovm_A 144 NACYEIDRVLTTMLRER-RPGYLMLPADVAKKAATPP---------------VNALTHK-Q-AH--ADSACLKAFRDAAE 203 (552)
T ss_dssp THHHHHHHHHHHHHHHT-CCEEEEEEHHHHHSBCCCC---------------SSCCCCC-C-CC--CCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCC-CCEEEEeehhhccCccCCC---------------ccccccc-C-CC--CCccchHHHHHHHH
Confidence 46889999999999876 9999999998532111000 0011100 0 00 11234456899999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-hhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-DHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-g~~~~~~~~~~~ 158 (983)
++|.+||||+||+|+|+. ..+.+++.+|+|++++||++|++ | ||.||++||++ +|.+ |..++...+..+
T Consensus 204 ~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~hp~~--~G~~~g~~~~~~~~~~l 274 (552)
T 1ovm_A 204 NKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLM-G------KGIFDERQAGF--YGTYSGSASTGAVKEAI 274 (552)
T ss_dssp HHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGG-G------TTSSCTTSTTC--CCCCCGGGSCHHHHHHH
T ss_pred HHHHhCCCCEEEECcCccccCHHHHHHHHHHHHCCCEEEccc-c------CccCCCCCcCe--ecccCCCCCCHHHHHHH
Confidence 999999999999999875 45578999999999999999998 5 79999999996 6775 656666677788
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||+||+++.+..+..|....++.++||||+|+.++++++..+ .+++.++++|.+ +... ...|.+.++.
T Consensus 275 ~~aD~vl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~----~~~~~~l~~L~~-l~~~-~~~~~~~~~~- 347 (552)
T 1ovm_A 275 EGADTVLCVGTRFTDTLTAGFTHQLTPAQTIEVQPHAARVGDVWFTG----IPMNQAIETLVE-LCKQ-HVHAGLMSSS- 347 (552)
T ss_dssp HTSSEEEEESCCCCTTTTTTTCCCCCTTTEEEECSSEEEETTEEEES----CCHHHHHHHHHH-HHHT-SCCC-------
T ss_pred HhCCEEEEECCCCCcccccccccCCCCCeEEEEeCChheeCCcccCC----ccHHHHHHHHHh-Cccc-ccchhhhhhh-
Confidence 99999999999998777665543333457999999999888765543 366999999987 5321 2245432221
Q ss_pred HHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 239 DMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
.... . ......++++..+++.|++.++++++++.|+|++.+ ...++.+ ..|++|+ .+.
T Consensus 348 --~~~~--~-~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~-----~~~~~~~-~~~~~~~-----------~~~ 405 (552)
T 1ovm_A 348 --SGAI--P-FPQPDGSLTQENFWRTLQTFIRPGDIILADQGTSAF-----GAIDLRL-PADVNFI-----------VQP 405 (552)
T ss_dssp -------------CCSBCCHHHHHHHHHHHCCTTCEEEECTTHHHH-----HHTTCCC-CSSCEEE-----------CCT
T ss_pred --cccc--c-cCCCCCccCHHHHHHHHHHhcCCCCEEEECCchHHH-----HHHhccc-CCCCeEE-----------ech
Confidence 1111 0 011245699999999999999999999999999443 2223332 3444443 357
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|+++||+||++|+|++..+..
T Consensus 406 ~~g~mG~--~l~~A~G~a~a~~~~~vv~~~GDG~~~~~~~el~ta~~--~~l~~~ivv~nN~~~~~~~~~~~~------- 474 (552)
T 1ovm_A 406 LWGSIGY--TLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLR--DKQHPIILVLNNEGYTVERAIHGA------- 474 (552)
T ss_dssp TTCCTTH--HHHHHHHHHHHCTTSCEEEEEEHHHHHHHTTHHHHHHH--TTCCCEEEEEESSSCHHHHHHSCT-------
T ss_pred hhHhhhh--HHHHHHHHHHhCCCCcEEEEECchHHHhHHHHHHHHHH--hCCCCEEEEEECCCCeEEEeeccC-------
Confidence 7899999 999999999998 8999999999999999999999999 999999999999999999764211
Q ss_pred cccccccCCCCCHHHHHHHcCC----ceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcccchHHHHHHHHHHHHH
Q 041113 398 LDQYFYTTHNISIQNLCLAHGL----NHVQVKTKVELEEALSMSQHLGTDRVIEVESCIDANATFHSMLRKFARQS 469 (983)
Q Consensus 398 ~~~~~~~~~~~df~~la~a~G~----~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~~~~~~~~~~~~~~~~~ 469 (983)
...+...+++||.++|++||+ ++++|++.+||+++|+++++.++|+||||.+++++.+..++++++.+++.
T Consensus 475 -~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~liev~~~~~~~~~~l~~~~~~~~~~ 549 (552)
T 1ovm_A 475 -EQRYNDIALWNWTHIPQALSLDPQSECWRVSEAEQLADVLEKVAHHERLSLIEVMLPKADIPPLLGALTKALEAC 549 (552)
T ss_dssp -TCGGGCCCCCCGGGSTTTSCSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEEEEECCTTCCCHHHHHHHHHHHHH
T ss_pred -CCCcccCCCCCHHHHHHHhCCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEEEEEcCcccCCHHHHHHHHHHhhh
Confidence 111223457899999999999 99999999999999999998899999999999999999999998887664
No 124
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=100.00 E-value=1.1e-50 Score=486.12 Aligned_cols=403 Identities=14% Similarity=0.100 Sum_probs=301.2
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.|++|++.|.+++ |||||+||+|++..+... . +.. .+.... . + .+.+.++.+.+++++
T Consensus 144 ~~~~~i~~A~~~A~~~~-GPV~l~iP~d~~~~~~~~----~-------~~~--~~~~~~-~-~--~~~~~~~~~~i~~~~ 205 (563)
T 2vk8_A 144 TAPAEIDRCIRTTYVTQ-RPVYLGLPANLVDLNVPA----K-------LLQ--TPIDMS-L-K--PNDAESEKEVIDTIL 205 (563)
T ss_dssp THHHHHHHHHHHHHHHT-SCEEEEEETTGGGSEEEG----G-------GGG--SCCCCS-C-C--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCEEEEechhhhcCccCC----c-------cCc--Cccccc-C-C--CCCchhhHHHHHHHH
Confidence 36889999999999876 999999999964321100 0 000 000000 0 0 011223456799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-hhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-DHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-g~~~~~~~~~~~ 158 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.||++||++ +|.+ |..++..++..+
T Consensus 206 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-g------~g~~~~~~p~~--~G~~~g~~~~~~~~~~l 276 (563)
T 2vk8_A 206 VLDKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPM-G------KGSIDEQHPRY--GGVYVGTLSKPEVKEAV 276 (563)
T ss_dssp HHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECTT-T------TTSSCTTSTTE--EEECCGGGSCHHHHHHH
T ss_pred HHHHhCCCCEEEECcCccccchHHHHHHHHHHhCCCEEECcc-c------CccCCCCCCcc--cccccCccCCHHHHHHH
Confidence 999999999999999875 45678999999999999999998 6 79999999996 6764 556666667778
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||+||+++++..+..|....++.++||||.|+.++++++..++ +++.++++|.+.+.... ..|.+ +..
T Consensus 277 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~----~~~~~l~~L~~~l~~~~-~~~~~-~~~- 349 (563)
T 2vk8_A 277 ESADLILSVGALLSDFNTGSFSYSYKTKNIVEFHSDHMKIRNATFPGV----QMKFVLQKLLTTIADAA-KGYKP-VAV- 349 (563)
T ss_dssp HTCSEEEEESCCCCTTTTTTTCCCCCCSCEEEECSSEEEETTEEEETC----CHHHHHHHHHHHHHHHT-TTCCC-CCC-
T ss_pred HhCCEEEEECCCCccccccccccCCCCCeEEEEeCCceEECCcccCCc----CHHHHHHHHHHhhcccc-chhhh-hhh-
Confidence 999999999999987776655432334579999999998888655443 57999999986542110 01110 000
Q ss_pred HHHHHHHHHhhh-cccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEe
Q 041113 239 DMMVASEISFQI-CADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVA 317 (983)
Q Consensus 239 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 317 (983)
+........ ....++++..+++.|++.+|++++++.|+|+.. |...++.+ +.|++|+ .+
T Consensus 350 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~~~-----~~~~~~~~-~~~~~~~-----------~~ 409 (563)
T 2vk8_A 350 ---PARTPANAAVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSA-----FGINQTTF-PNNTYGI-----------SQ 409 (563)
T ss_dssp ---CCCCCCCCCCCTTCBCCHHHHHHHHTTTCCTTCEEEECTTHHH-----HHGGGSCC-CSSCEEE-----------CC
T ss_pred ---hhhcccccCCCCCCCcCHHHHHHHHHHhCCCCCEEEECCchHH-----HHHhhcCc-CCCCeEE-----------cc
Confidence 000000000 123468999999999999999999999999843 23333332 3344433 35
Q ss_pred ecCCCCCccchHHHHHhhhhcc-C----ceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC-N----KHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADR 392 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~-~----~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~ 392 (983)
+++|+||+ ++|+|+|+++|. + ++||+++|||+|+|+++||+|+++ +++|+++||+||++|+|++.++...
T Consensus 410 ~~~g~mG~--~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~~~el~ta~~--~~l~~~ivv~nN~~~~~~~~~~~~~- 484 (563)
T 2vk8_A 410 VLWGSIGF--TTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIR--WGLKPYLFVLNNDGYTIQKLIHGPK- 484 (563)
T ss_dssp TTTCCTTH--HHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEESSSCHHHHHHSCTT-
T ss_pred cchhhhhh--HHHHHHHHHHhCcccCCCCCEEEEEcchHhhccHHHHHHHHH--cCCCcEEEEEECCcchhhhhhhCCC-
Confidence 78899999 999999999997 6 999999999999999999999999 9999999999999999987542111
Q ss_pred CCccccccccccCCCCCHHHHHHHcCCc---eeeeCCHHHHHHHHH-hhhccC-CCEEEEEEcCcccchHHHHHHHHHHH
Q 041113 393 TEPRILDQYFYTTHNISIQNLCLAHGLN---HVQVKTKVELEEALS-MSQHLG-TDRVIEVESCIDANATFHSMLRKFAR 467 (983)
Q Consensus 393 ~~~~~~~~~~~~~~~~df~~la~a~G~~---~~~v~~~~eL~~aL~-~a~~~~-~p~lIeV~~~~~~~~~~~~~~~~~~~ 467 (983)
..+...+++||.++|++||++ +++|++.+||.++|+ ++++.+ +|+||||.+++++.+..++.+++.+.
T Consensus 485 -------~~~~~~~~~d~~~~a~a~G~~~~~~~~v~~~~el~~al~~~a~~~~~~p~liev~~~~~~~~~~~~~~~~~~~ 557 (563)
T 2vk8_A 485 -------AQYNEIQGWDHLSLLPTFGAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIEVMLPVFDAPQNLVEQAKLTA 557 (563)
T ss_dssp -------CGGGCCCCCCGGGHHHHTTCSSEEEEEECBHHHHHHHHTCTTTTSCSSEEEEEEECCTTCCCHHHHHHHHHHH
T ss_pred -------CCcccCCCCCHHHHHHHhCCCCCcEEEecCHHHHHHHHHHHHHhCCCCcEEEEEEeCccccCHHHHHHHHHhh
Confidence 112233578999999999999 999999999999999 887754 79999999999999999999988776
Q ss_pred HH
Q 041113 468 QS 469 (983)
Q Consensus 468 ~~ 469 (983)
+.
T Consensus 558 ~~ 559 (563)
T 2vk8_A 558 AT 559 (563)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 125
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=100.00 E-value=1.2e-49 Score=477.34 Aligned_cols=395 Identities=13% Similarity=0.070 Sum_probs=302.4
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
+++..+++|++.|.++| |||||+||.|++..+.... ..+.... . +. ..+.+ .+.+++++
T Consensus 164 ~~~~~l~~A~~~A~~~~-GPV~l~iP~d~~~~~~~~~---------------~~~~~~~-~-~~--~~~~~-~~~i~~~~ 222 (570)
T 2vbf_A 164 NATYEIDRVLSQLLKER-KPVYINLPVDVAAAKAEKP---------------ALSLEKE-S-ST--TNTTE-QVILSKIE 222 (570)
T ss_dssp THHHHHHHHHHHHHHHC-CCEEEEEEHHHHTSBCCCC---------------SSCCC----------CHHH-HHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCC-CCEEEEcchhhhcCcccCC---------------ccccccc-C-CC--CCccH-HHHHHHHH
Confidence 47889999999999976 9999999999654332110 0011100 0 00 01112 56799999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccch-hhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHL-DHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~-g~~~~~~~~~~~ 158 (983)
++|.+||||+|++|+|+. ..+.+++.+|||++++||++|++ | ||.||++||++ +|.+ |..++...+..+
T Consensus 223 ~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~p~~--~G~~~g~~~~~~~~~~l 293 (570)
T 2vbf_A 223 ESLKNAQKPVVIAGHEVISFGLEKTVTQFVSETKLPITTLNF-G------KSAVDESLPSF--LGIYNGKLSEISLKNFV 293 (570)
T ss_dssp HHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECST-T------TTSSCTTSTTE--EEECCGGGSCHHHHHHH
T ss_pred HHHHcCCCCEEEECcCccccChHHHHHHHHHHHCCCEEECcc-c------CccCCCCCcCc--cCCcCCCcCCHHHHHHH
Confidence 999999999999999876 34568999999999999999998 6 79999999996 6765 555555566678
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||+||+++.+..+..|....++.++||||.|+.++++++..+ .|++.++++|.+.+.... |. +...
T Consensus 294 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~----~~~~~~l~~L~~~l~~~~---~~--~~~~ 364 (570)
T 2vbf_A 294 ESADFILMLGVKLTDSSTGAFTHHLDENKMISLNIDEGIIFNKVVED----FDFRAVVSSLSELKGIEY---EG--QYID 364 (570)
T ss_dssp HHCSEEEEESCCCCGGGTTTTCCCCCGGGEEEECSSCEEETTEEECS----SCHHHHHHTGGGCCSCCC---CS--CCCC
T ss_pred HhCCEEEEECCCcccccccccccCCCCCeEEEEeCCHHHhCCeeecC----CCHHHHHHHHHHhccccc---cc--cchh
Confidence 89999999999998877765543333457999999999888765443 479999999988664321 31 1100
Q ss_pred HHHHHHHHHhhhcccCCCCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCCcceeEee
Q 041113 239 DMMVASEISFQICADYSLTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWIRVAG 318 (983)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (983)
. ..........++++..+++.|++.+|++++++.|.|+ +. |...++.+ +.|++|+ .++
T Consensus 365 ~-----~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~----~~-~~~~~~~~-~~~~~~~-----------~~~ 422 (570)
T 2vbf_A 365 K-----QYEEFIPSSAPLSQDRLWQAVESLTQSNETIVAEQGT----SF-FGASTIFL-KSNSRFI-----------GQP 422 (570)
T ss_dssp C-----CCCCCCCCSSBCCHHHHHHHHHHHCCSSEEEEECTTH----HH-HHHTTSCC-CTTCEEE-----------CCT
T ss_pred h-----hccccCCCCCCcCHHHHHHHHHHhcCCCCEEEEeCCH----HH-HHHHhccc-CCCCeEe-----------cCc
Confidence 0 0000011234699999999999999999999999998 32 22223332 3444433 357
Q ss_pred cCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccc
Q 041113 319 NRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRI 397 (983)
Q Consensus 319 ~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~ 397 (983)
++|+||+ ++|+|+|+++|. +++||+++|||+|+|++|||+|+++ +++|+++||+||++|+|++.++..
T Consensus 423 ~~g~mG~--~l~~A~Gaala~~~~~vv~~~GDG~~~~~~~eL~ta~~--~~l~~~ivv~nN~~~~~~~~~~~~------- 491 (570)
T 2vbf_A 423 LWGSIGY--TFPAALGSQIADKESRHLLFIGDGSLQLTVQELGLSIR--EKLNPICFIINNDGYTVEREIHGP------- 491 (570)
T ss_dssp TTCCTTT--HHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHH--TTCCCEEEEEESSSCHHHHHHSCT-------
T ss_pred cchhhhh--hHHHHHHHHHhCCCCcEEEEEcchhhhcCHHHHHHHHH--cCCCCEEEEEECCchHHHHHHhcc-------
Confidence 7899999 999999999998 8999999999999999999999999 999999999999999999764221
Q ss_pred cccccccCCCCCHHHHHHHcCCc-----eeeeCCHHHHHHHHHh-hhccCCCEEEEEEcCcccchHHHHHHHHHHHH
Q 041113 398 LDQYFYTTHNISIQNLCLAHGLN-----HVQVKTKVELEEALSM-SQHLGTDRVIEVESCIDANATFHSMLRKFARQ 468 (983)
Q Consensus 398 ~~~~~~~~~~~df~~la~a~G~~-----~~~v~~~~eL~~aL~~-a~~~~~p~lIeV~~~~~~~~~~~~~~~~~~~~ 468 (983)
+..+.+.+++||.++|++||++ +.+|++.+||+++|++ +++.++|.||||.+++++.+..++++++.+++
T Consensus 492 -~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~~~~el~~al~~a~~~~~~p~liev~~~~~~~~~~~~~~~~~~~~ 567 (570)
T 2vbf_A 492 -TQSYNDIPMWNYSKLPETFGATEDRVVSKIVRTENEFVSVMKEAQADVNRMYWIELVLEKEDAPKLLKKMGKLFAE 567 (570)
T ss_dssp -TCGGGCCCCCCGGGHHHHTTCCTTTEEEEEECBHHHHHHHHHHHHHCTTSEEEEEEECCTTCCCHHHHHHHHHHHH
T ss_pred -CCCccCCCCCCHHHHHHHcCCCcCCcceEEecCHHHHHHHHHHHHhcCCCcEEEEEEcCcccccHHHHHHHHHhhh
Confidence 1112334679999999999998 8999999999999998 46788999999999999999999998887654
No 126
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=2.8e-47 Score=432.61 Aligned_cols=270 Identities=17% Similarity=0.140 Sum_probs=219.0
Q ss_pred eeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCcccccccccccCchhhhhhhcCC-CCCcchhh
Q 041113 524 CREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAKISYFLPLLKGSFSSWIWSTLGI-PACEIFPS 602 (983)
Q Consensus 524 ~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 602 (983)
.++.++|+|+|++|++||||+.+. +.. .....+.+.|.|+|+++.++..++..+... ..+. ...+..++
T Consensus 68 ~~~~v~V~v~td~G~~G~GE~~~g----~~~--~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~----~~~~~g~~~~~~~ 137 (415)
T 2p3z_A 68 VLGTLIVEVEAENRQTGFAVSTAG----EMG--CFIVEKHLNRFIEGKCVSDIKLIHDQMLGA----TMYYSGSGGLVMN 137 (415)
T ss_dssp SSCEEEEEEEETTSCEEEEEEECH----HHH--HHHHHHTTHHHHTTSBTTCHHHHHHHHHHH----HTTTSTTSSHHHH
T ss_pred cceEEEEEEEECCCCEEEEEecCC----HHH--HHHHHHHHHHHHCCCChhhHHHHHHHHHHh----hhcccCCCcchHH
Confidence 477999999999999999999642 221 122234588999999988866555322110 1111 12244678
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCC-
Q 041113 603 VRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARR- 681 (983)
Q Consensus 603 a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~- 681 (983)
|++|||+||||++||.+|+|||+||||.. +++|++|++. .++++ .++.||+++|+|+|..
T Consensus 138 A~said~ALwDl~ak~~g~Pl~~lLGG~~---------~~~vp~y~~g---~~~~~-------~~~~G~~~~KiK~g~g~ 198 (415)
T 2p3z_A 138 TISCVDLALWDLFGKVVGLPVYKLLGGAV---------RDEIQFYATG---ARPDL-------AKEMGFIGGKMPTHWGP 198 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTCBHHHHTTCCS---------SSEEEEEEES---SCHHH-------HHHHTCSEEEEECCCCG
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHcCCCC---------CCceeeeecC---CCHHH-------HHHhCcceEEEecccCc
Confidence 99999999999999999999999999975 4679998762 34542 3457999999999631
Q ss_pred ----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcC--CcE
Q 041113 682 ----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESG--LPV 753 (983)
Q Consensus 682 ----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~--ipI 753 (983)
.++++|+++|++||+++|+++.|++|+|++|++++|+++++.|+++++.|||||++ |++++++|+++++ +||
T Consensus 199 ~~G~~~~~~d~~~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipI 278 (415)
T 2p3z_A 199 HDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMV 278 (415)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEE
T ss_pred ccccccHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcE
Confidence 13578999999999999999999999999999999999999999999999999998 8899999999988 999
Q ss_pred EeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCCchHHHHHHHHHHHhhchhh
Q 041113 754 ALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAFESGLGLSAYIIFSSYLELQ 833 (983)
Q Consensus 754 a~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~es~ig~~a~~~laa~~~~~ 833 (983)
++||++++.. .++.+++.++|++|+|++++||++++++++++|+++|+++++|++ ..+++|++++++|+
T Consensus 279 a~dE~~~~~~-----~~~~~i~~~~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~------~~a~~hlaaa~p~~ 347 (415)
T 2p3z_A 279 TSGEHHGTLQ-----SFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS------SVYSHHAVITFTNT 347 (415)
T ss_dssp EECTTCCSHH-----HHHHHHHTTCSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC------HHHHHHHHTTCTTC
T ss_pred EcCCCCCCHH-----HHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh------HHHHHHHHHhCCCC
Confidence 9999999865 366665545999999999999999999999999999999887543 24689999999964
No 127
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=100.00 E-value=7.1e-49 Score=469.44 Aligned_cols=392 Identities=14% Similarity=0.087 Sum_probs=298.8
Q ss_pred CHHHHHHHHHHHccCCCCCcEEEcCCCCCCCCCCCCcccccccccccccccCCCCccccccccccccccccchhhHHHHH
Q 041113 1 MILTTLDSAVHWATSSPYGPVHINCPFREPLDNSPKHWMSSCLKGLDIWTSSIEPFTKYIQVQHSHACKSYTYCQMAEVL 80 (983)
Q Consensus 1 ~i~~~i~~A~~~a~~~~~GPV~l~iP~d~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (983)
++++.+++|++.|.++ +|||||+||.|....+..+. .+... .. +.+.+.++.+++++
T Consensus 160 ~~~~~i~~A~~~A~~~-~GPV~l~iP~Dv~~~~~~~~----------------~~~~~----~~--~~~~~~~~~i~~~~ 216 (565)
T 2nxw_A 160 KAPAEIARVLGAARAQ-SRPVYLEIPRNMVNAEVEPV----------------GDDPA----WP--VDRDALAACADEVL 216 (565)
T ss_dssp THHHHHHHHHHHHHHH-TCCEEEEEEGGGTTCBCCCC----------------CCCCC----CC--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEECChhhhcCcCCCc----------------cccCC----CC--CCchhhHHHHHHHH
Confidence 4678999999999986 69999999988532221100 00000 00 01123446789999
Q ss_pred HHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccc-hhhhccCcccccc
Q 041113 81 ELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDH-LDHALLSESVKDW 158 (983)
Q Consensus 81 ~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~-~g~~~~~~~~~~~ 158 (983)
++|.+||||+|++|+++. .++.+++.+|||++|+||++|++ | ||.+|++||++ +|. .|..++..++..+
T Consensus 217 ~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~-~------~g~~~~~~p~~--~G~~~g~~~~~~~~~~l 287 (565)
T 2nxw_A 217 AAMRSATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFM-G------RGLLADAPTPP--LGTYIGVAGDAEITRLV 287 (565)
T ss_dssp HHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCSCEEECGG-G------TTTTTTSSSCC--SCBCCGGGSCHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcchhchHHHHHHHHHHhCCCEEECcc-c------CccCCCCCCcc--ccccCcccCCHHHHHHH
Confidence 999999999999999875 34578999999999999999998 5 79999999996 676 4656666666778
Q ss_pred CCCCEEEEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHHHHHHH
Q 041113 159 IQFDVIIQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCSFLRAL 238 (983)
Q Consensus 159 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~~~~~~ 238 (983)
++||+||++|+++.+..+..|...+.+.++||||.|+.++++++..+ ..+..++++|.+.+... ...|.....
T Consensus 288 ~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~i~~d~~~~~~~~~~~----~~~~~~l~~L~~~l~~~-~~~w~~~~~-- 360 (565)
T 2nxw_A 288 EESDGLFLLGAILSDTNFAVSQRKIDLRKTIHAFDRAVTLGYHTYAD----IPLAGLVDALLERLPPS-DRTTRGKEP-- 360 (565)
T ss_dssp HTCSEEEEESCCBCSSTTSBCTTTSCGGGEEEEETTEEEETTEEEES----CCHHHHHHHHHHTSCCC-CCCCCCSCS--
T ss_pred HhCCEEEEECCCccccccccccccCCCCcEEEEeCCceeeCCcccCC----ccHHHHHHHHHHhcccc-chhhhhhhh--
Confidence 99999999999998777654544444567999999998887654333 34578999998765432 233432100
Q ss_pred HHHHHHHHHhhh-cccCCCCHHHHHHHHHhhcCC--CceE-EEecCcchhhhhhhcCCCcccccccccccccCCCCCcce
Q 041113 239 DMMVASEISFQI-CADYSLTEPHVAHELSRALTS--NSAL-FVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPHQWI 314 (983)
Q Consensus 239 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~--~~iv-~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 314 (983)
....... ....++++..+++.|++.+|+ ++++ +.|.|+ +..+...+ .|++|+
T Consensus 361 -----~~~~~~~~~~~~~l~~~~v~~~l~~~l~~~~~~iv~~~d~G~----~~~~~~~~-----~~~~~~---------- 416 (565)
T 2nxw_A 361 -----HAYPTGLQADGEPIAPMDIARAVNDRVRAGQEPLLIAADMGD----CLFTAMDM-----IDAGLM---------- 416 (565)
T ss_dssp -----SCCCCCCCCSSSBCCHHHHHHHHHHHHHTTCCCCEEEECSSH----HHHHHTTS-----CCSCEE----------
T ss_pred -----hhccccccCCCCccCHHHHHHHHHHhcccccCCEEEEecchH----HHHHHHhC-----CCcEEE----------
Confidence 0000001 123469999999999999999 9998 899998 32222211 233333
Q ss_pred eEeecCCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCC
Q 041113 315 RVAGNRGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRT 393 (983)
Q Consensus 315 ~~~~~~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~ 393 (983)
.++++|+||+ |+|+|+|+++|. +++||+++|||+|+|+++||+|+++ +++|++|||+||++|++++..+..
T Consensus 417 -~~~~~g~mG~--~l~~A~G~ala~~~~~vv~i~GDG~~~~~~~~l~ta~~--~~l~~~ivv~nN~~~~~~~~~~~~--- 488 (565)
T 2nxw_A 417 -APGYYAGMGF--GVPAGIGAQCVSGGKRILTVVGDGAFQMTGWELGNCRR--LGIDPIVILFNNASWEMLRTFQPE--- 488 (565)
T ss_dssp -CCTTTCCTTC--HHHHHHHHHHHTTTCCEEEEEEHHHHHHHGGGGGGHHH--HTCCCEEEEEECSBCHHHHHHCTT---
T ss_pred -ccCccccccc--cchHHHHHHHhCCCCcEEEEEechHHHhhHHHHHHHHH--hCCCCEEEEEECCCCcEEeeeccc---
Confidence 3577899999 999999999998 8999999999999999999999999 999999999999999998653110
Q ss_pred CccccccccccCCCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCE-EEEEEcCcccchHHHHHHHHHHHHH
Q 041113 394 EPRILDQYFYTTHNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDR-VIEVESCIDANATFHSMLRKFARQS 469 (983)
Q Consensus 394 ~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~-lIeV~~~~~~~~~~~~~~~~~~~~~ 469 (983)
. .+...+++||.++|++||+++++|++.+||+++|+++++.++|. ||||.+++++.++.++++++.+++.
T Consensus 489 --~----~~~~~~~~d~~~~a~a~G~~~~~v~~~~el~~al~~a~~~~gp~~liev~~~~~~~~~~~~~~~~~~~~~ 559 (565)
T 2nxw_A 489 --S----AFNDLDDWRFADMAAGMGGDGVRVRTRAELKAALDKAFATRGRFQLIEAMIPRGVLSDTLARFVQGQKRL 559 (565)
T ss_dssp --C----GGGBCCCCCHHHHTGGGTSEEEEECBHHHHHHHHHHHHHCCSSCEEEEEECCTTCCCHHHHHHHHHHHHC
T ss_pred --C----CCCcCCCCCHHHHHHHcCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEEEEcccccCCHHHHHHHHHHHHh
Confidence 1 12233578999999999999999999999999999999888998 9999999999999999998877654
No 128
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=100.00 E-value=5e-47 Score=421.10 Aligned_cols=295 Identities=21% Similarity=0.290 Sum_probs=242.4
Q ss_pred EEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-cCcccHHHHHHHHHHHHhHhccCcccc
Q 041113 497 RMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-IHKENLLDAEEQLRFLLHFMTGAKISY 575 (983)
Q Consensus 497 ~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-~~~~~~~~~~~~l~~~~~~l~g~~~~~ 575 (983)
+|+++.+++||+.||.++.+.. ..++.++|||+|++|++||||+.|.+ ++.+++..+...++.+.+.+ ++.+
T Consensus 4 ~i~~~~~~~pl~~p~~~s~~~~----~~~~~~lV~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~~~~l~~~l---~~~~ 76 (332)
T 2ozt_A 4 RWQWRIYEEPLQEPLTTAQGVW----RSRSGIYLRLEDEQGQVGYGEIAPLPGWGSETLNADIALCQQLPGHL---TPEI 76 (332)
T ss_dssp EEEEEEEEEEEEEEEEETTEEE----EEEEEEEEEEECTTSCEEEEEECCCTTSSSCCHHHHHHHHHHSCSEE---CHHH
T ss_pred EEEEEEEEeecCCCcEecCEEE----EeeeEEEEEEEECCCCEEEEEecCCCCCCcccHHHHHHHHHHhhccC---CHHH
Confidence 7899999999999999988754 45899999999999999999998875 34566655444333332222 2222
Q ss_pred cccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecCCCC
Q 041113 576 FLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDSNKS 655 (983)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~~ 655 (983)
+..++. ..+.+++|||+||| +.|| ||+.. + + +.|++. ..+
T Consensus 77 ~~~~~~-----------------~~~~a~~aid~Al~-l~gk---------lgg~~---------~-~-~~y~~~--~~~ 116 (332)
T 2ozt_A 77 MATIPE-----------------ALPAAQFGFATAWQ-SVGR---------LPYRV---------R-P-WPICAL--LGS 116 (332)
T ss_dssp HTTSCT-----------------TCHHHHHHHHHHHH-HTTT---------CSCCC---------C-C-CCBCEE--ECT
T ss_pred HHHHHH-----------------HhHHHHHHHHHHHH-Hhcc---------cCCCC---------C-C-cceEEe--cCC
Confidence 222111 12568999999999 8888 56654 2 3 445443 246
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC---CCcee
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC---DLQYI 732 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~---~i~~i 732 (983)
++++.+++++++++||++||+|+|. .++++|+++|++||+++|+++.|+||+|++||+++|+++++.|+++ ++.||
T Consensus 117 ~e~~~~~a~~~~~~G~~~~KiKvg~-~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~~~i~~i 195 (332)
T 2ozt_A 117 GQAALEQWQQSWQRGQTTFKWKVGV-MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANRWFAWLDRHGNGKIEYV 195 (332)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECSS-SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHHHHHCCTTEEEE
T ss_pred hHHHHHHHHHHHHcCCcEEEEEeCC-CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHHHHHHHHhhccCCccee
Confidence 7889999999999999999999996 3689999999999999999999999999999999999999999999 99999
Q ss_pred ecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHc--CCc
Q 041113 733 EEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRH--GKM 807 (983)
Q Consensus 733 EeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~--gi~ 807 (983)
|||++ |++++++|++++++||++||++++..+ +..+++.+ ++++++|++++||++ +++++|+++ |++
T Consensus 196 EqP~~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~-----~~~~~~~~a~~~i~ik~~~~GGi~---~i~~~A~~~~~gi~ 267 (332)
T 2ozt_A 196 EQPLPPDQWQALLSLAQTVTTAIALDESVVSAAE-----VQRWVDRGWPGFFVIKTALFGDPD---SLSLLLRRGLEPQR 267 (332)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSCEEESTTCCSHHH-----HHHHHHTTCCSEEEECHHHHSCHH---HHHHHHHTTCCGGG
T ss_pred ECCCCCCCHHHHHHHHHhCCCCEEeCCCCCCHHH-----HHHHHHhCCCCEEEEChhhhCCHH---HHHHHHHHhCCCCc
Confidence 99998 789999999999999999999998753 66666655 689999999999997 678899999 999
Q ss_pred EEeCCCCchHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhccccc
Q 041113 808 AVVSAAFESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKED 862 (983)
Q Consensus 808 ~~~~~~~es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 862 (983)
++++|++||+|++++++||+++++| ..++|+++..||.+|
T Consensus 268 ~~~~~~~es~i~~aa~~hlaa~~~~---------------~~~~gl~t~~~~~~~ 307 (332)
T 2ozt_A 268 LVFSSALEGAIARTAIFHLLETWQP---------------CHALGFGVDRWRSAP 307 (332)
T ss_dssp EEEBCCSCCHHHHHHHHHHHHHHCC---------------CSCBBCCCTTTCCCC
T ss_pred EEEeCCcchHHHHHHHHHHHHhCCC---------------CcCCcCCchhhcccC
Confidence 9999999999999999999999873 456789998888764
No 129
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=4.6e-47 Score=434.13 Aligned_cols=306 Identities=14% Similarity=0.166 Sum_probs=246.9
Q ss_pred CCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCc-------ccHHHHHHHHHH-HHhHhccCcccccccc
Q 041113 508 CAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHK-------ENLLDAEEQLRF-LLHFMTGAKISYFLPL 579 (983)
Q Consensus 508 ~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~-------~~~~~~~~~l~~-~~~~l~g~~~~~~~~~ 579 (983)
..||.+++++. .+.++.++|+|+|++|++||||+.+.++++ ++...+...++. ++|.|+|+++.++..+
T Consensus 36 ~~P~~~~~~~~---~~~~~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i 112 (413)
T 1kcz_A 36 GSTVTEGFTQV---RQKGESISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFLAKDFIPVIEKEIAPKLIGREITNFKPM 112 (413)
T ss_dssp SCCCSTTCSSS---EEECCEEEEEEEETTSCEEEEEECCCTTTTSTTSCSCCCHHHHHHHHHHHTHHHHTTCBCCCHHHH
T ss_pred CCCEEcccceE---eecCcEEEEEEEECCCCEEEEEEccccccccCcccccccHHHHHHHHHHHHHHHHcCCChhhHHHH
Confidence 46888887653 134889999999999999999998764221 233455566664 8999999998876555
Q ss_pred cccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC--CCCHH
Q 041113 580 LKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS--NKSPV 657 (983)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~--~~~~~ 657 (983)
+..+ .... .......++|++|||+||||+.||.+|+|||+||||... . ...+++||+|++... ..+++
T Consensus 113 ~~~l-----~~~~-~~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLGg~~~--~--~~~~~~vp~~~~~g~~~~~~~~ 182 (413)
T 1kcz_A 113 AEEF-----DKMT-VNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYN--P--GAEINAVPVFAQSGDDRYDNVD 182 (413)
T ss_dssp HHHH-----HHCE-ETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHS--T--TCCCCCCCEECCCTTCTTHHHH
T ss_pred HHHH-----Hhcc-cCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccc--C--cCccCCeeeeEecCccccCCHH
Confidence 4321 1110 011224578999999999999999999999999998410 0 001468999986532 13578
Q ss_pred HHHHHHHHhhhcC-CCEEEEeccCCCC--hHH----HHHHHHHHHHHcCCCcEEEEEcCCC------CCHHHHHHHHhhc
Q 041113 658 EVASIATTLVEEG-FTAIKLKVARRAD--PIK----DAEVIQEVRKKVGHRIELRVDANRN------WTYQEALEFGFLI 724 (983)
Q Consensus 658 ~~~~~~~~~~~~G-~~~~KiKig~~~~--~~~----d~~~v~~vr~~~g~~~~l~vDaN~~------~~~~~a~~~~~~l 724 (983)
++.+++++++++| |++||+|+|.. . +.+ |+++|++||+++|+++.|++|+|++ ||+++|+++++.|
T Consensus 183 ~~~~~a~~~~~~G~~~~~KiKvG~~-~~~~~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~~~~a~~~~~~L 261 (413)
T 1kcz_A 183 KMIIKEADVLPHALINNVEEKLGLK-GEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAMADYIQTL 261 (413)
T ss_dssp HHHHTTCSEEEECCCCCCCCCCCTT-SHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchhheeeccCCC-ccchhhHHHHHHHHHHHHHHhcCCCceEEEecCCCcccccCCCHHHHHHHHHHH
Confidence 8889999898999 99999999962 2 344 8999999999999999999999999 9999999999999
Q ss_pred ccC--CCc-eeecCCC------ChHHHHHHHhh-----cCCcEEeCCCccCcCCChHHHHHhhcCC-CceEEEEcCCCcC
Q 041113 725 KDC--DLQ-YIEEPVQ------NEEDIIKYCEE-----SGLPVALDETIDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIG 789 (983)
Q Consensus 725 ~~~--~i~-~iEeP~~------~~~~~~~l~~~-----~~ipIa~dEs~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~G 789 (983)
+++ ++. |||||++ |++++++|+++ +++||++||++++..+ +..+++. .+|++|+|++++|
T Consensus 262 ~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~v~ik~~~~G 336 (413)
T 1kcz_A 262 AEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVED-----VKFFTDNKAGHMVQIKTPDLG 336 (413)
T ss_dssp HHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHH-----HHHHHHTTCSSEEEECTGGGS
T ss_pred HhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHH-----HHHHHHhCCCCEEEeCccccC
Confidence 998 666 9999994 57788999988 8999999999988753 6666654 4799999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEeCC-CCchHHHHHHHHHHHhhchh
Q 041113 790 GFENAGLIARWAQRHGKMAVVSA-AFESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 790 Gl~~~~~~~~~A~~~gi~~~~~~-~~es~ig~~a~~~laa~~~~ 832 (983)
|++++++++++|+++|+++++|| ++||++++++++||+++++|
T Consensus 337 Git~a~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hlaaa~~~ 380 (413)
T 1kcz_A 337 GVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMACGA 380 (413)
T ss_dssp STHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHHHHHHHHhcCCC
Confidence 99999999999999999999988 78999999999999999874
No 130
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=3e-46 Score=426.00 Aligned_cols=299 Identities=18% Similarity=0.216 Sum_probs=236.7
Q ss_pred CCccccccccCcceeeeEEEEEEEECCCCEEEEeecCc---------Cc-CcccHHHHHHHHH-HHHhHhccCccccccc
Q 041113 510 PPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPL---------EI-HKENLLDAEEQLR-FLLHFMTGAKISYFLP 578 (983)
Q Consensus 510 p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~---------~~-~~~~~~~~~~~l~-~~~~~l~g~~~~~~~~ 578 (983)
|++.+++.. .+.++.++|+|+|++|++||||+.+. +. +. +.+...++ .+.|.|+|+++.+++.
T Consensus 38 p~~~~f~~~---~~~~~~v~V~v~td~G~~G~GE~~~~~~sGa~~r~~~~~~---~~~~~~i~~~l~p~LiG~d~~~~~~ 111 (413)
T 1kko_A 38 PVTPGFTSV---RQAGECVSVQLILENGAVAVGDCAAVQYSGAGGRDPLFLA---EHFIPFLNDHIKPLLEGRDVDAFLP 111 (413)
T ss_dssp CCSTTCSSS---EEEEEEEEEEEEETTSCEEEEEECCCTTTTSTTCCCCCCH---HHHHHHHHHHTHHHHTTCBCSCSHH
T ss_pred CccCCcceE---EEecceEEEEEEECCCCEEEEEecccccccccccCccccH---HHHHHHHHHHHHHHHcCCChHhHHH
Confidence 555555421 24489999999999999999999875 21 22 23344454 4889999999887655
Q ss_pred ccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecC--CCCH
Q 041113 579 LLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDS--NKSP 656 (983)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~--~~~~ 656 (983)
++..+ ..... ......++|++|||+||||+.||.+|+|||+||||... ..+ .+++||+|++... ..++
T Consensus 112 i~~~l-----~~~~~-~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg~~~--~~l--~~~~vp~y~~~g~~~~~~~ 181 (413)
T 1kko_A 112 NARFF-----DKLRI-DGNLLHTAVRYGLSQALLDATALASGRLKTEVVCDEWQ--LPC--VPEAIPLFGQSGDDRYIAV 181 (413)
T ss_dssp HHHHH-----HHCEE-TTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHTT--CCC--CCCCCCEECCCTTCTTHHH
T ss_pred HHHHH-----Hhhhc-ccCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCccc--ccc--ccCCeEEEEecCccccCCH
Confidence 54321 11110 01113578999999999999999999999999998520 001 1357999876311 1367
Q ss_pred HHHHHHHHHhhhcC-CCEEEEeccCCCChHH-------HHHHHHHHHHHcCCCcEEEEEcCC------CCCHHHHHHHHh
Q 041113 657 VEVASIATTLVEEG-FTAIKLKVARRADPIK-------DAEVIQEVRKKVGHRIELRVDANR------NWTYQEALEFGF 722 (983)
Q Consensus 657 ~~~~~~~~~~~~~G-~~~~KiKig~~~~~~~-------d~~~v~~vr~~~g~~~~l~vDaN~------~~~~~~a~~~~~ 722 (983)
+++++++.+++++| |++||+|+|. +.++ |+++|++||+++|+++.|++|+|+ +||+++|+++++
T Consensus 182 ~~~~~~~~~~~~~G~~~~iK~KvG~--~~~~~~~~l~~d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~ 259 (413)
T 1kko_A 182 DKMILKGVDVLPHALINNVEEKLGF--KGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIA 259 (413)
T ss_dssp HHHHHTTCSEEEETTCCCCCCCCCT--TSHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccEEEEecCC--ChhhHHHHHHHHHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHH
Confidence 88888888888899 9999999996 4444 459999999999999999999999 999999999999
Q ss_pred hcccCCCc---eeecCCC------ChHHHHHHHhh-----cCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCC
Q 041113 723 LIKDCDLQ---YIEEPVQ------NEEDIIKYCEE-----SGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSV 787 (983)
Q Consensus 723 ~l~~~~i~---~iEeP~~------~~~~~~~l~~~-----~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~ 787 (983)
.|+++++. |||||++ |++++++|+++ +++||++||++++..+ +..+++.+ +|++|+|+++
T Consensus 260 ~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~-----~~~~i~~~a~d~i~ik~~~ 334 (413)
T 1kko_A 260 SLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQD-----IVDFTDAGSCHMVQIKTPD 334 (413)
T ss_dssp HTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHH-----HHHHHHTTCCSEEEECGGG
T ss_pred HHHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHH-----HHHHHHhCCCCEEEeCccc
Confidence 99995433 9999998 67788999988 8999999999998753 66666544 7999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhch
Q 041113 788 IGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLE 831 (983)
Q Consensus 788 ~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~ 831 (983)
+|||+++++++++|+++|+++++||+. ||++++++++||+++++
T Consensus 335 ~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~aa~~hlaaa~~ 379 (413)
T 1kko_A 335 LGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAAR 379 (413)
T ss_dssp GSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999996 99999999999999864
No 131
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=100.00 E-value=1e-42 Score=383.98 Aligned_cols=289 Identities=27% Similarity=0.405 Sum_probs=223.2
Q ss_pred EEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCcCcccHHHHHHHHHHHHhHhccCccccc
Q 041113 497 RMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEIHKENLLDAEEQLRFLLHFMTGAKISYF 576 (983)
Q Consensus 497 ~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~~~~~~~~~~~~l~~~~~~l~g~~~~~~ 576 (983)
+|+++.+++||+.||.. . ..++.++|+ |.+||||+.|++.+.+. +.
T Consensus 2 ~i~~~~~~~Pl~~pf~~-~-------~~r~~~lV~-----G~~G~GE~~p~~~~~~~-----~~---------------- 47 (327)
T 2opj_A 2 SLTGRAFAIPLRTRFRG-I-------TVREGMLVR-----GAAGWGEFSPFAEYGPR-----EC---------------- 47 (327)
T ss_dssp CCSEEEEEEEEEEEETT-E-------EEEEEEEEE-----CSSCEEEECCCTTCCHH-----HH----------------
T ss_pred EEEEEEEEEeeccCcee-e-------eEEEEEEEE-----cCEEEEEecCCCCCCHH-----HH----------------
Confidence 56788899999988861 1 348888884 99999999987643210 00
Q ss_pred ccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccccccccccceeEEEEeecCCCCH
Q 041113 577 LPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEIDEEISKRSTSIKICALIDSNKSP 656 (983)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~~~~~~~~~~i~~~~~~~~~~~~ 656 (983)
...+++|||||||| +| |+. +++|++|+++. ..++
T Consensus 48 -----------------------~~~~~aaid~Al~~-------~P-----g~~----------r~~v~~~~ti~-~~~~ 81 (327)
T 2opj_A 48 -----------------------ARWWAACYEAAELG-------WP-----APV----------RDTVPVNATVP-AVGP 81 (327)
T ss_dssp -----------------------HHHHHHHHHHHHTC-------CC-----CCS----------CSEEEBCEEEC-SCCH
T ss_pred -----------------------HHHHHHHHHHHHhC-------CC-----cCC----------CCeeEEeEEeC-CCCH
Confidence 02357999999974 46 333 47899998874 4678
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeecC
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEEP 735 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEeP 735 (983)
+++.+.++ ++||++||+|+|.+ .++++|+++|++||+++|+++.||||+|++||+++|+++++.|+++++.|||||
T Consensus 82 e~~~~~~~---~~G~~~~KiKvg~~g~~~~~d~~~v~avR~~~G~~~~L~vDaN~~w~~~~A~~~~~~L~~~~l~~iEqP 158 (327)
T 2opj_A 82 EEAARIVA---SSGCTTAKVKVAERGQSEANDVARVEAVRDALGPRGRVRIDVNGAWDVDTAVRMIRLLDRFELEYVEQP 158 (327)
T ss_dssp HHHHHHHH---HHCCSEEEEECCC------CHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECC
T ss_pred HHHHHHHH---HCCCCEEEEEeCCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCcEEeCC
Confidence 77655443 58999999999852 146889999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC
Q 041113 736 VQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF 814 (983)
Q Consensus 736 ~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~ 814 (983)
+++++++++|++++++|||+||++++..+ +..+++.+ +|++|+|++++||+++++++++ .+|+++++|+++
T Consensus 159 ~~~~~~~~~l~~~~~iPIa~dEs~~~~~~-----~~~~i~~~a~d~i~ik~~~~GGit~~~~ia~---~~gi~~~~~~~~ 230 (327)
T 2opj_A 159 CATVDELAEVRRRVSVPIAADESIRRAED-----PLRVRDAEAADVVVLKVQPLGGVRAALRLAE---ECGLPVVVSSAV 230 (327)
T ss_dssp SSSHHHHHHHHHHCSSCEEC----------------CTTTTTCCSBEEECHHHHTSHHHHHHHHH---HTCSCEEEBCCS
T ss_pred CCCHHHHHHHHhhCCCCEEcCCCCCCHHH-----HHHHHHhCCCCEEEeCccccCCHHHHHHHHH---HcCCcEEEcCCC
Confidence 99889999999999999999999999865 55666554 7999999999999999998764 569999999999
Q ss_pred chHHHHHHHHHHHhhchhhhhhhhhhccccCCCCCccCccchhcccccCCCCCceeec----cCCCCeeeEEecchhhhh
Q 041113 815 ESGLGLSAYIIFSSYLELQNAYLCKVMNRELCPPVAQGLGTYQWLKEDVTTDPISICH----NSCRGFVEASVAKATHIL 890 (983)
Q Consensus 815 es~ig~~a~~~laa~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~p~~~~~----~P~~pGlGv~~d~a~~~~ 890 (983)
||+||+++++|++++++|. ...+++++..++.+|++.+|+.+++ +| ||++| ++.+
T Consensus 231 es~ig~aa~~hlaaa~~~~--------------~~~~~l~~~~~~~~d~~~~~~~~~~G~l~vp-----gve~d--~~~l 289 (327)
T 2opj_A 231 ETSVGLAAGVALAAALPEL--------------PYACGLATLRLLHADVCDDPLLPVHGVLPVR-----RVDVS--EQRL 289 (327)
T ss_dssp CCHHHHHHHHHHHHHSSCC--------------SSCBBCCGGGGBSCCSBSSCCCCBTTEEECC-----CCCBC--HHHH
T ss_pred cCHHHHHHHHHHHHhCCCc--------------ccccccCchhhhhhhcccCCCeeECCEEECC-----CcccC--HHHH
Confidence 9999999999999999853 1223444556778898878888763 55 68999 8888
Q ss_pred hhccccc
Q 041113 891 QNLQINN 897 (983)
Q Consensus 891 ~~~~~~~ 897 (983)
+++....
T Consensus 290 ~~~~~~~ 296 (327)
T 2opj_A 290 AEVEIDP 296 (327)
T ss_dssp HHTEECC
T ss_pred HhccCCc
Confidence 8888653
No 132
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.2e-42 Score=398.79 Aligned_cols=306 Identities=17% Similarity=0.132 Sum_probs=241.7
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC----------------cCcccHHH
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE----------------IHKENLLD 556 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~----------------~~~~~~~~ 556 (983)
|||++|+++.+..+ . + ++.++|+|+|++|++|||++.... +.+++...
T Consensus 9 MkI~~i~~~~v~~s--------~-----g---~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~~~~g~~~~~ 72 (427)
T 2pa6_A 9 FEIKDIVAREVIDS--------R-----G---NPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKRFGGKGVLM 72 (427)
T ss_dssp GBEEEEEEEEEECT--------T-----S---CEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSSGGGGTCCHH
T ss_pred CEEEEEEEEEEEcC--------C-----C---CceEEEEEEECCCCeeeEecccccccCcceeEeecCCccccccccHHH
Confidence 79999999988732 1 1 568999999999999999653211 22334445
Q ss_pred HHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCccc
Q 041113 557 AEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEID 634 (983)
Q Consensus 557 ~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~~ 634 (983)
+...++ .+.|.|+|+++.+.+.++.. +....+.. ......+|++|||+||||+.||.+|+|||+||||..
T Consensus 73 ~~~~i~~~l~p~LiG~d~~~~~~i~~~-----l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLGg~~--- 144 (427)
T 2pa6_A 73 AVENVNSIIRPEILGYDARMQREIDTI-----MIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLGGFN--- 144 (427)
T ss_dssp HHHHHHHTHHHHHTTCBTTCHHHHHHH-----HHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHCSC---
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHH-----HHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhcCcc---
Confidence 556666 58999999998876554432 11111111 122346899999999999999999999999999975
Q ss_pred cccccccceeEEEEe--ecCC---------------CCHHHHHHHHHHhhhcCCCEEEE----eccCC-----------C
Q 041113 635 EEISKRSTSIKICAL--IDSN---------------KSPVEVASIATTLVEEGFTAIKL----KVARR-----------A 682 (983)
Q Consensus 635 ~~~~~~~~~i~~~~~--~~~~---------------~~~~~~~~~~~~~~~~G~~~~Ki----Kig~~-----------~ 682 (983)
++++|+|.+ +.+. ...+++.+++.+++++||+++|+ |+|.. .
T Consensus 145 ------~~~vp~~~~~~~~gg~~~~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~ 218 (427)
T 2pa6_A 145 ------SYVMPVPMMNVINGGKHAGNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAP 218 (427)
T ss_dssp ------CCEECEECEEEEECSTTTSSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCC
T ss_pred ------ccccccchhccccccccccCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCC
Confidence 356777642 2111 12367788899999999999998 75521 1
Q ss_pred ChHHHHHHHHHHHHHc---CC--CcEEEEEc-------CCCC-------CHHHHHHHHh-hcccCCCceeecCCC--ChH
Q 041113 683 DPIKDAEVIQEVRKKV---GH--RIELRVDA-------NRNW-------TYQEALEFGF-LIKDCDLQYIEEPVQ--NEE 740 (983)
Q Consensus 683 ~~~~d~~~v~~vr~~~---g~--~~~l~vDa-------N~~~-------~~~~a~~~~~-~l~~~~i~~iEeP~~--~~~ 740 (983)
+++.|+++|++||+++ |+ ++.|++|+ |++| |.++|++++. .+++|++.|||||++ |++
T Consensus 219 ~~~~d~~~v~~vreav~~~G~~~~~~L~vDa~as~~~~n~~~~~~n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~ 298 (427)
T 2pa6_A 219 PLKTSREALDLLTESVKKAGYEDEVVFALDAAASEFYKDGYYYVEGKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFE 298 (427)
T ss_dssp SCCSHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHH
T ss_pred CccchHHHHHHHHHHHHHhCCCCCcEEEEEcchhccccCCceeecCCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHH
Confidence 3578999999999999 98 99999999 6665 8999999965 899999999999998 889
Q ss_pred HHHHHHhhcCCcEEeCCCccC-cCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chH
Q 041113 741 DIIKYCEESGLPVALDETIDK-FQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESG 817 (983)
Q Consensus 741 ~~~~l~~~~~ipIa~dEs~~~-~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ 817 (983)
++++|++++++||++||++.+ .. .+..+++. .+|++|+|++++|||+++++++++|+++|++++++|++ ||+
T Consensus 299 ~~~~l~~~~~ipIa~dE~~~~~~~-----~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~ 373 (427)
T 2pa6_A 299 GFAMITKELDIQIVGDDLFVTNVE-----RLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETE 373 (427)
T ss_dssp HHHHHHHHSSSEEEESTTTTTCHH-----HHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCS
T ss_pred HHHHHHhhCCCeEEeCccccCCHH-----HHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCCh
Confidence 999999999999999999554 54 36665554 47999999999999999999999999999999998887 999
Q ss_pred HHHHHHHHHHhhchhh
Q 041113 818 LGLSAYIIFSSYLELQ 833 (983)
Q Consensus 818 ig~~a~~~laa~~~~~ 833 (983)
++.++++|++++.+|+
T Consensus 374 i~~aa~l~~a~~~~~~ 389 (427)
T 2pa6_A 374 DTTIADLSVALNSGQI 389 (427)
T ss_dssp CCHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCcc
Confidence 9999999999998864
No 133
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=1.1e-42 Score=398.86 Aligned_cols=304 Identities=17% Similarity=0.165 Sum_probs=243.7
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc------------------CcccH
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI------------------HKENL 554 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~------------------~~~~~ 554 (983)
|||++|+.+.+. .+. .++.++|+|+|++|++| ||+.|.+. .++++
T Consensus 1 ~~I~~v~~~~v~--------~sr--------g~~~v~V~v~td~G~~G-ge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~ 63 (431)
T 2fym_A 1 SKIVKIIGREII--------DSR--------GNPTVEAEVHLEGGFVG-MAAAPSGASTGSREALELRDGDKSRFLGKGV 63 (431)
T ss_dssp CBEEEEEEEEEE--------CTT--------SCEEEEEEEEETTSCEE-EEECCCCCSSCSSSCCCCCCCCTTSGGGTCC
T ss_pred CeeEEEEEEEEE--------cCC--------CCeeEEEEEEECCCCcc-ceecCcccccCcccceeccCCcccccccccH
Confidence 689999998873 111 15789999999999999 99987641 22224
Q ss_pred HHHHHHHHH-HHhHhccCcccccccccccCchhhhhhhcCCCC-CcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCc
Q 041113 555 LDAEEQLRF-LLHFMTGAKISYFLPLLKGSFSSWIWSTLGIPA-CEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTE 632 (983)
Q Consensus 555 ~~~~~~l~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~ 632 (983)
..+...++. +.|.|+|+++.+.+.++.. +....+... .....+|++|||+||||+.||.+|+|||+||||..
T Consensus 64 ~~~~~~i~~~l~p~LiG~d~~~~~~i~~~-----l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~- 137 (431)
T 2fym_A 64 TKAVAAVNGPIAQALIGKDAKDQAGIDKI-----MIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELN- 137 (431)
T ss_dssp HHHHHHHHTHHHHHHTTSBTTCHHHHHHH-----HHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH-----HHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhcCcc-
Confidence 455555654 8999999998876554431 111112111 22345899999999999999999999999999864
Q ss_pred cccccccccce----eEE--EEeecC---------CCC----H--HHHHHHHHHhhhcCCCEEE---------EeccCC-
Q 041113 633 IDEEISKRSTS----IKI--CALIDS---------NKS----P--VEVASIATTLVEEGFTAIK---------LKVARR- 681 (983)
Q Consensus 633 ~~~~~~~~~~~----i~~--~~~~~~---------~~~----~--~~~~~~~~~~~~~G~~~~K---------iKig~~- 681 (983)
+++ +|+ |..+.+ ..+ | +++.+++.++.++||+++| +|+|..
T Consensus 138 --------~~~~~~~~pv~~~~~~~gg~~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~g~~~kvG~~g 209 (431)
T 2fym_A 138 --------GTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEG 209 (431)
T ss_dssp --------TCTTCCCCCEECEEEEECGGGSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTS
T ss_pred --------cccccccccceeEeeccCccccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCcccccCccc
Confidence 122 444 332210 112 4 6677888899999999999 999852
Q ss_pred ---CChHHHHHHHHHHHHHc-------CCCcEEEEEc----------------C-CCCCHHHHHHHHhhccc-CCCceee
Q 041113 682 ---ADPIKDAEVIQEVRKKV-------GHRIELRVDA----------------N-RNWTYQEALEFGFLIKD-CDLQYIE 733 (983)
Q Consensus 682 ---~~~~~d~~~v~~vr~~~-------g~~~~l~vDa----------------N-~~~~~~~a~~~~~~l~~-~~i~~iE 733 (983)
.+++.|+++|++||+++ |+++.|++|+ | ++||.++|+++++.|++ |++.|||
T Consensus 210 g~~~~~~~d~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~i~~iE 289 (431)
T 2fym_A 210 GYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIE 289 (431)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCCCCccchHHHHHHHHHHHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCCceEEE
Confidence 15678999999999999 9999999999 9 99999999999999988 9999999
Q ss_pred cCCC--ChHHHHHHHhhc--CCcEEeCC-CccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 734 EPVQ--NEEDIIKYCEES--GLPVALDE-TIDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 734 eP~~--~~~~~~~l~~~~--~ipIa~dE-s~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
||++ |++++++|++++ ++||++|| ++++.. .++.+++.+ +|++++|++++||||++++++++|+++|++
T Consensus 290 ePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~-----~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~ 364 (431)
T 2fym_A 290 DGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTK-----ILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYT 364 (431)
T ss_dssp SCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCE
T ss_pred CCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHH-----HHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCe
Confidence 9998 789999999998 89999999 998875 366666544 799999999999999999999999999999
Q ss_pred EEeCCCC-chHHHHHHHHHHHhhchh
Q 041113 808 AVVSAAF-ESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 808 ~~~~~~~-es~ig~~a~~~laa~~~~ 832 (983)
++++|++ ||+++.++++|+++..++
T Consensus 365 ~~~~h~~get~~~~~a~la~a~~~~~ 390 (431)
T 2fym_A 365 AVISHRSGETEDATIADLAVGTAAGQ 390 (431)
T ss_dssp EEEECCSSCCSCCHHHHHHHHTTCEE
T ss_pred EEEeCCCCCchHHHHHHHHHhcCCCc
Confidence 9999999 999999999999988774
No 134
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=1.2e-40 Score=382.50 Aligned_cols=303 Identities=16% Similarity=0.121 Sum_probs=240.3
Q ss_pred eEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc------------------CcccHH
Q 041113 494 KICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI------------------HKENLL 555 (983)
Q Consensus 494 kI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~------------------~~~~~~ 555 (983)
.|.+|..+.+- .+.+ ++.++|+|+|++|++| ||+.|.+. .++++.
T Consensus 13 ~i~~~~~r~i~--------dsrg--------~~~v~V~V~td~G~~G-ge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~ 75 (444)
T 1w6t_A 13 IITDVYAREVL--------DSRG--------NPTLEVEVYTESGAFG-RGMVPSGASTGEHEAVELRDGDKSRYGGLGTQ 75 (444)
T ss_dssp BEEEEEEEEEE--------CTTS--------CEEEEEEEEETTCCEE-EEECCCC---CCSSCCCCCCCCTTSGGGTCCH
T ss_pred hcceeEEEEEE--------cCCC--------CceEEEEEEECCCCEe-eEecccccccccceeeeeccCcccccccccHH
Confidence 68999988762 2232 6889999999999999 99987542 122344
Q ss_pred HHHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcc
Q 041113 556 DAEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEI 633 (983)
Q Consensus 556 ~~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~ 633 (983)
.+...++ .+.|.|+|+++.+...++..+ ....+.. ......+|++||||||||+.||.+|+|||+||||..
T Consensus 76 ~a~~~i~~~l~p~LiG~d~~~~~~i~~~l-----~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~-- 148 (444)
T 1w6t_A 76 KAVDNVNNIIAEAIIGYDVRDQQAIDRAM-----IALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLGGFN-- 148 (444)
T ss_dssp HHHHHHHHTHHHHHTTSBTTCHHHHHHHH-----HHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHCTT--
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHH-----HHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC--
Confidence 4455565 589999999988765544321 1111111 112346899999999999999999999999999975
Q ss_pred ccccccccceeEEEEe--ecCC---------------CCHHHHHHHHHHhhhcCCCEEE---------EeccCC----CC
Q 041113 634 DEEISKRSTSIKICAL--IDSN---------------KSPVEVASIATTLVEEGFTAIK---------LKVARR----AD 683 (983)
Q Consensus 634 ~~~~~~~~~~i~~~~~--~~~~---------------~~~~~~~~~~~~~~~~G~~~~K---------iKig~~----~~ 683 (983)
+++||+|.+ +.+. ...++..+++.++.++||+++| +|+|.. .+
T Consensus 149 -------~~~vp~~~~~~~~gg~~a~~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~kg~~~kvG~~gg~~~~ 221 (444)
T 1w6t_A 149 -------TKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSRGLETAVGDEGGFAPR 221 (444)
T ss_dssp -------CCEECEECEEEEECGGGCSSSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCC
T ss_pred -------cccccccccceeccccccccccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCc
Confidence 466887753 1110 0124556778888889999999 788852 15
Q ss_pred hHHHHHHHHHHHHHc-------CCCcEEEEEc---------CCC-------------CCHHHHHHHHhhcc-cCCCceee
Q 041113 684 PIKDAEVIQEVRKKV-------GHRIELRVDA---------NRN-------------WTYQEALEFGFLIK-DCDLQYIE 733 (983)
Q Consensus 684 ~~~d~~~v~~vr~~~-------g~~~~l~vDa---------N~~-------------~~~~~a~~~~~~l~-~~~i~~iE 733 (983)
++.|+++|++||+++ |+++.|++|+ |++ ||+++|+++++.|. +|++.|||
T Consensus 222 ~~~d~~~l~avreav~~agy~pG~dv~L~vDaaas~~~~~~n~~y~~~~n~~~~~~~~t~~eai~~~~~l~~~~~i~~iE 301 (444)
T 1w6t_A 222 FEGTEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIE 301 (444)
T ss_dssp CSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCEEEEE
T ss_pred hHhHHHHHHHHHHHHHHhccCCCCCcEEEEEccchhcccccCCceeeccccCcccCCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 678999999999999 9999999999 888 88999999999986 59999999
Q ss_pred cCCC--ChHHHHHHHhhc--CCcEEeCCC-ccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 734 EPVQ--NEEDIIKYCEES--GLPVALDET-IDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 734 eP~~--~~~~~~~l~~~~--~ipIa~dEs-~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
||++ |++++++|++++ ++||++||+ +++.. .+..+++. .+|++|+|++++||||++++++++|+++|++
T Consensus 302 ePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~-----~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~ 376 (444)
T 1w6t_A 302 DGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTD-----YLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYT 376 (444)
T ss_dssp SCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCE
T ss_pred CCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHH-----HHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCe
Confidence 9998 789999999998 899999998 88765 36665654 4799999999999999999999999999999
Q ss_pred EEeCCCC-chHHHHHHHHHHHhhchh
Q 041113 808 AVVSAAF-ESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 808 ~~~~~~~-es~ig~~a~~~laa~~~~ 832 (983)
++++|++ ||+++.++++|+++..++
T Consensus 377 v~~~h~~get~i~~~a~lava~~~~~ 402 (444)
T 1w6t_A 377 AVVSHRSGETEDSTIADIAVATNAGQ 402 (444)
T ss_dssp EEEECCSSCCSCCHHHHHHHHTTCCE
T ss_pred EEecCCCCCchHHHHHHHHHhcCCCc
Confidence 9998988 999999999999988774
No 135
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=7e-40 Score=373.84 Aligned_cols=307 Identities=15% Similarity=0.094 Sum_probs=233.9
Q ss_pred cceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-----------------cCccc
Q 041113 491 SICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-----------------IHKEN 553 (983)
Q Consensus 491 ~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-----------------~~~~~ 553 (983)
++|||++|+++.+..|+. ++.++|+|+|++| +||||+.+.. +.++.
T Consensus 2 ~~m~I~~i~~~~v~~~~~----------------~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~ 64 (432)
T 2ptz_A 2 SHMTIQKVHGREVLDSRG----------------NPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKG 64 (432)
T ss_dssp CTTSCCEEEEEEEECTTS----------------CEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTC
T ss_pred CCCEEEEEEEEEEecCCC----------------CcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCccccccccc
Confidence 348999999999874431 4578999999999 9999985421 22234
Q ss_pred HHHHHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC---
Q 041113 554 LLDAEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY--- 628 (983)
Q Consensus 554 ~~~~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG--- 628 (983)
+..+...++ .+.|.|+|+++.+...++.. +....+.. ......+|++|||+||||+.||.+|+|||+|||
T Consensus 65 v~~av~~v~~~iap~LiG~d~~~~~~i~~~-----m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~ 139 (432)
T 2ptz_A 65 CLQAVKNVNEVIGPALIGRDELKQEELDTL-----MLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLA 139 (432)
T ss_dssp CHHHHHHHHHTHHHHHTTCCTTCHHHHHHH-----HHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCChhhHHHHHHH-----HHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhcccc
Confidence 444444454 48999999999876554432 11111111 123446899999999999999999999999999
Q ss_pred CCCccccccccccceeEEEEeecCC------CCHHHH---------HHHHHHhhhcCCCEEEEec----cCC--------
Q 041113 629 PLTEIDEEISKRSTSIKICALIDSN------KSPVEV---------ASIATTLVEEGFTAIKLKV----ARR-------- 681 (983)
Q Consensus 629 g~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~---------~~~~~~~~~~G~~~~KiKi----g~~-------- 681 (983)
|..+ .+.++|+|.++.++ .+++++ .+++.++.++||+++|+|+ |..
T Consensus 140 G~~~-------~~~pvp~~~~i~gg~~a~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdeg 212 (432)
T 2ptz_A 140 GTKE-------LRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEG 212 (432)
T ss_dssp TCSC-------CEECEEEEEEEECSTTSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTS
T ss_pred CCCC-------cCCceeEEEEecCcccccCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCcc
Confidence 8641 12567777765322 123344 6788889999999999865 531
Q ss_pred ------CChHHHHHH-HHHHHHHcCC--CcEEEEEcCCCC---------------------CHHHHHHHH-hhcccCCCc
Q 041113 682 ------ADPIKDAEV-IQEVRKKVGH--RIELRVDANRNW---------------------TYQEALEFG-FLIKDCDLQ 730 (983)
Q Consensus 682 ------~~~~~d~~~-v~~vr~~~g~--~~~l~vDaN~~~---------------------~~~~a~~~~-~~l~~~~i~ 730 (983)
.+.++|+++ ++++| ++|+ ++.|++|+|++| +..+++++. +.+++|++.
T Consensus 213 g~~p~~~~~~~~l~~i~~Air-~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~i~ 291 (432)
T 2ptz_A 213 GFAPPIKDINEPLPILMEAIE-EAGHRGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYPIV 291 (432)
T ss_dssp SBCCSCCCTTTHHHHHHHHHH-HTTCTTSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSCEE
T ss_pred CcCCCcccHHHHHHHHHHHHH-HhCCcCCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCCce
Confidence 025789996 88888 7898 999999999885 445555444 678999999
Q ss_pred eeecCCC--ChHHHHHHHhhc--CCcEEeCCC-ccCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHc
Q 041113 731 YIEEPVQ--NEEDIIKYCEES--GLPVALDET-IDKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRH 804 (983)
Q Consensus 731 ~iEeP~~--~~~~~~~l~~~~--~ipIa~dEs-~~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~ 804 (983)
|||||++ |++++++|++++ ++||++||. +++.. .++.+++.+ +|++++|++++||||++++++++|+++
T Consensus 292 ~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~-----~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~ 366 (432)
T 2ptz_A 292 SIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTE-----RIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMEN 366 (432)
T ss_dssp EEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHH-----HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHT
T ss_pred EEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHH-----HHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHc
Confidence 9999998 899999999998 899999996 56654 466666554 799999999999999999999999999
Q ss_pred CCcEEeCCCC-chHHHHHHHHHHHhhchh
Q 041113 805 GKMAVVSAAF-ESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 805 gi~~~~~~~~-es~ig~~a~~~laa~~~~ 832 (983)
|++++++|+. ||.++..+.+|++...++
T Consensus 367 g~~v~~~h~~get~~~~~a~lava~~~~~ 395 (432)
T 2ptz_A 367 GWSVMVSHRSGETEDTYIADLVVALGSGQ 395 (432)
T ss_dssp TCEEEEECCSBCCSCCHHHHHHHHHTCSE
T ss_pred CCeEEecCCCCccHHHHHHHHHHHhCCCC
Confidence 9999998876 889999999999987763
No 136
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=2.6e-38 Score=358.34 Aligned_cols=304 Identities=17% Similarity=0.131 Sum_probs=230.7
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-----------------cCcccHH
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-----------------IHKENLL 555 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-----------------~~~~~~~ 555 (983)
|+|++|..+.+- .+. .++++.|+|+|++|.+|+|++.... |.++.+.
T Consensus 26 m~I~~i~~r~i~--------dsr--------g~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~ 89 (449)
T 3uj2_A 26 LEIEKVIGREII--------DSR--------GNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVT 89 (449)
T ss_dssp TBEEEEEEEEEE--------CTT--------SCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCH
T ss_pred eEEEEEEEEEEE--------CCC--------CCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHH
Confidence 799999988762 222 1688999999999999999764321 2233344
Q ss_pred HHHHHH-HHHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCCCCcc
Q 041113 556 DAEEQL-RFLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYPLTEI 633 (983)
Q Consensus 556 ~~~~~l-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg~~~~ 633 (983)
...+.+ +.+.|.|+|+++.+.+.++..+ ....+.. ......+|++|||+||||+.||.+|+|||+||||..
T Consensus 90 ~av~~v~~~iap~LiG~d~~~~e~i~~~m-----~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG~~-- 162 (449)
T 3uj2_A 90 KAVQNINTEISEILSGMDASDIYAVDRAM-----IDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLGGLN-- 162 (449)
T ss_dssp HHHHHHHTHHHHHHTTSBTTCHHHHHHHH-----HHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHGGG--
T ss_pred HHHHHHHHHHHHHHccCCccCHHHHHHHH-----HHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhCCCC--
Confidence 333333 4589999999998866654322 1111211 122345799999999999999999999999999975
Q ss_pred ccccccccceeEE--EEeecCCC------CHH---------HHHHHHHHhhhcCCCEEEE--e-------ccCC----C-
Q 041113 634 DEEISKRSTSIKI--CALIDSNK------SPV---------EVASIATTLVEEGFTAIKL--K-------VARR----A- 682 (983)
Q Consensus 634 ~~~~~~~~~~i~~--~~~~~~~~------~~~---------~~~~~~~~~~~~G~~~~Ki--K-------ig~~----~- 682 (983)
++++|+ |.+++++. +.+ +..+++.++.++||+++|+ | +|.. +
T Consensus 163 -------~~~lpvp~~n~inGG~ha~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~g~~t~vGdeggfap~ 235 (449)
T 3uj2_A 163 -------ANRLPVPMMNILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLATSVGDEGGFAPD 235 (449)
T ss_dssp -------CCBCCEECEEEEECSTTSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCC
T ss_pred -------CCceeeeeEEEecCcccCCCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCcCCC
Confidence 344444 66553221 112 2456778888899999998 4 5521 1
Q ss_pred --ChHHHHHHH-HHHHHH---cCCCcEEEEEcCC------------------CCCHHHHHHHHhh-cccCCCceeecCCC
Q 041113 683 --DPIKDAEVI-QEVRKK---VGHRIELRVDANR------------------NWTYQEALEFGFL-IKDCDLQYIEEPVQ 737 (983)
Q Consensus 683 --~~~~d~~~v-~~vr~~---~g~~~~l~vDaN~------------------~~~~~~a~~~~~~-l~~~~i~~iEeP~~ 737 (983)
+.++++++| ++||++ +|+++.|++|+|+ .||.++++++++. +++|++.|||||++
T Consensus 236 ~~~~~e~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~ 315 (449)
T 3uj2_A 236 LASDEEAIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPIVSIEDGLD 315 (449)
T ss_dssp CSCHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSCEEEEESCSC
T ss_pred ccCHHHHHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcCceEEECCCC
Confidence 246778877 788998 9999999999984 3689999999986 89999999999998
Q ss_pred --ChHHHHHHHhhc--CCcEEeCCCccC-cCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeC
Q 041113 738 --NEEDIIKYCEES--GLPVALDETIDK-FQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVS 811 (983)
Q Consensus 738 --~~~~~~~l~~~~--~ipIa~dEs~~~-~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~ 811 (983)
|++++++|++++ ++||++||++.+ .. .++.+++. .+|++++|++++||||++++++++|+++|+++|++
T Consensus 316 ~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~-----~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 316 EEDWEGWQYMTRELGDKIQLVGDDLFVTNTE-----RLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp TTCHHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cchHHHHHHHHHHhCCCceEECCcceeCCHH-----HHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 899999999988 799999999874 53 36666654 47999999999999999999999999999999999
Q ss_pred CCC-chHHHHHHHHHHHhhch
Q 041113 812 AAF-ESGLGLSAYIIFSSYLE 831 (983)
Q Consensus 812 ~~~-es~ig~~a~~~laa~~~ 831 (983)
|+. ||..+..+.++++...+
T Consensus 391 H~sgET~d~~iadLaVa~~~~ 411 (449)
T 3uj2_A 391 HRSGETEDTTIADLAVALNTG 411 (449)
T ss_dssp CCSBCCSCCHHHHHHHHTTCC
T ss_pred CCCCCchHHHHHHHHHHhCCC
Confidence 976 78888888777776543
No 137
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=1.6e-36 Score=342.31 Aligned_cols=305 Identities=17% Similarity=0.114 Sum_probs=229.9
Q ss_pred eeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC------------------cCcccH
Q 041113 493 CKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE------------------IHKENL 554 (983)
Q Consensus 493 mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~------------------~~~~~~ 554 (983)
.+|++|..+.+- .+.+ +++|.|+|+|++|.+|+|.+ |.. |.++.+
T Consensus 3 ~~i~~~~~r~i~--------dsrg--------~ptvev~v~t~~G~~G~~~~-psgastG~~ea~elrd~~~~~y~gkgv 65 (428)
T 3tqp_A 3 ATITDINAHEIL--------DSRA--------NPTLEVRVTLSSQAYGCAAV-PSGASTGEREAVELRDNDLERYGGKGV 65 (428)
T ss_dssp CCEEEEEEEEEE--------CTTS--------CEEEEEEEEETTSCEEEEEC-CBCC---CCSCCCCCCCCTTSGGGTCC
T ss_pred ceEEEEEEEEEE--------cCCC--------CCEEEEEEEECCCCEEEEec-cccccCCcceeEeecCCCccccccccH
Confidence 479999988762 2222 68999999999999999954 332 122233
Q ss_pred HHHHHHH-HHHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCC-CC
Q 041113 555 LDAEEQL-RFLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYP-LT 631 (983)
Q Consensus 555 ~~~~~~l-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg-~~ 631 (983)
..+.+.+ +.+.|.|+|+++.+.+.++..+ ....+.. ......+|++|||+||||+.||.+|+|||+|||| ..
T Consensus 66 ~~av~~v~~~iap~LiG~d~~~~~~i~~~m-----~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG~~~ 140 (428)
T 3tqp_A 66 LQAVENVNGPIRDALLGQDPRSQEEIDRIM-----IELDGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLGGDGG 140 (428)
T ss_dssp HHHHHHHHTHHHHHHTTCCTTCHHHHHHHH-----HHHHCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccCHHHHHHHH-----HHhcCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhCCCCC
Confidence 3344444 4589999999998765554322 1111111 1223457999999999999999999999999999 53
Q ss_pred ccccccccccceeEEEEeecCCC------CHHH---------HHHHHHHhhhcCCCEEEEe---------ccC----CCC
Q 041113 632 EIDEEISKRSTSIKICALIDSNK------SPVE---------VASIATTLVEEGFTAIKLK---------VAR----RAD 683 (983)
Q Consensus 632 ~~~~~~~~~~~~i~~~~~~~~~~------~~~~---------~~~~~~~~~~~G~~~~KiK---------ig~----~~~ 683 (983)
. .+.+||+|.+++++. +.++ ..+++.++.++||+++|+| +|. .++
T Consensus 141 ~-------~~~pvp~~~~inGG~ha~~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~g~~t~vGdegg~ap~ 213 (428)
T 3tqp_A 141 P-------FSMPVPMMNIINGGAHATNNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSRGLMSAVGDEGGFAPD 213 (428)
T ss_dssp C-------CCBCEEEEEEEECC----CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCC
T ss_pred C-------ceeeeEEEEEecCcccCCCccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhcccccccccCCCCCcCCC
Confidence 1 146788888764321 1122 4567778888999999998 552 113
Q ss_pred hHHHHHH----HHHHHHH---cCCCcEEEEEc--------------CCCCCHHHHHHHHhh-cccCCCceeecCCC--Ch
Q 041113 684 PIKDAEV----IQEVRKK---VGHRIELRVDA--------------NRNWTYQEALEFGFL-IKDCDLQYIEEPVQ--NE 739 (983)
Q Consensus 684 ~~~d~~~----v~~vr~~---~g~~~~l~vDa--------------N~~~~~~~a~~~~~~-l~~~~i~~iEeP~~--~~ 739 (983)
.+.|.++ +++||++ +|+++.|++|+ |++||.++|+++++. +++|++.|||||++ |+
T Consensus 214 ~~~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~ 293 (428)
T 3tqp_A 214 LPNNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDW 293 (428)
T ss_dssp CSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCH
T ss_pred cccHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEeCCCCcccH
Confidence 3345554 6899999 99999999999 589999999999998 89999999999998 89
Q ss_pred HHHHHHHhhcC--CcEEeCCC-ccCcCCChHHHHHhhcCC-CceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-
Q 041113 740 EDIIKYCEESG--LPVALDET-IDKFQKDPLNMLEKYAHP-GIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF- 814 (983)
Q Consensus 740 ~~~~~l~~~~~--ipIa~dEs-~~~~~~~~~~~~~~~~~~-~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~- 814 (983)
+++++|+++++ +||++||. +.+.. .+..+++. .+|++++|++++||||++++++++|+++|+++|++|+.
T Consensus 294 eg~~~L~~~~~~pI~ivGDel~vt~~~-----~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sG 368 (428)
T 3tqp_A 294 AGWKLLTERLENKVQLVGDDIFVTNPD-----ILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSG 368 (428)
T ss_dssp HHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSB
T ss_pred HHHHHHHHhcCCCcceeccccccCCHH-----HHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCCCC
Confidence 99999999887 66778885 45543 36666654 47999999999999999999999999999999999977
Q ss_pred chHHHHHHHHHHHhhch
Q 041113 815 ESGLGLSAYIIFSSYLE 831 (983)
Q Consensus 815 es~ig~~a~~~laa~~~ 831 (983)
||..+..+.++++...+
T Consensus 369 Eted~~iadLaVa~~~~ 385 (428)
T 3tqp_A 369 ETEDTTIADLAVATDAR 385 (428)
T ss_dssp CCSCCHHHHHHHHTTCE
T ss_pred CchHHHHHHHHHHcCCC
Confidence 77788888888876544
No 138
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=4.8e-37 Score=345.33 Aligned_cols=305 Identities=18% Similarity=0.145 Sum_probs=231.1
Q ss_pred CCccceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-----------------cC
Q 041113 488 CSLSICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-----------------IH 550 (983)
Q Consensus 488 ~~~~~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-----------------~~ 550 (983)
+.| .+|++|..+.+- .+.| +++|.|+|+|++|..|++.+ |.+ |.
T Consensus 2 ~~~--~~i~~i~~r~i~--------dsrG--------~ptvev~v~t~~g~~g~a~v-psgastg~~ea~elrd~~~~y~ 62 (417)
T 3qn3_A 2 NAM--LVIEDVRAYEVL--------DSRG--------NPTVKAEVTLSDGSVGAAIV-PSGASTGSKEALELRDNDERFG 62 (417)
T ss_dssp -CC--SBEEEEEEEEEE--------CTTS--------CEEEEEEEEETTCCEEEEEC-CCCBSSCSSSCBCCCCCSTGGG
T ss_pred CCC--ceeeEEEEEEEE--------cCCC--------CceEEEEEEECCCCEEEEec-CCCCccccceeeeecCCCcccc
Confidence 445 379999988762 2222 78999999999999999854 332 11
Q ss_pred cccHHHHHHHHH-HHHhHhccCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC
Q 041113 551 KENLLDAEEQLR-FLLHFMTGAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY 628 (983)
Q Consensus 551 ~~~~~~~~~~l~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG 628 (983)
++.+..+...++ .+.|.|+|+++.+.+.++..+ ....+.. ......+|++|||+||||+.||.+|+|||+|||
T Consensus 63 gkgv~~av~~v~~~iap~LiG~d~~~~~~id~~m-----~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG 137 (417)
T 3qn3_A 63 GKGVLKAVANVNETIADEILGLDAFNQTQLDDTL-----RELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLG 137 (417)
T ss_dssp GTCCHHHHHHHHTHHHHHHTTSBTTCHHHHHHHH-----HHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHCCCCccCHHHHHHHH-----HHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC
Confidence 223334444443 589999999998765554321 1111211 123446899999999999999999999999999
Q ss_pred CCCccccccccccceeEEEEe--ecCC------CCHHHH------HHHHHHhhhcC---CCEEEE---------eccCC-
Q 041113 629 PLTEIDEEISKRSTSIKICAL--IDSN------KSPVEV------ASIATTLVEEG---FTAIKL---------KVARR- 681 (983)
Q Consensus 629 g~~~~~~~~~~~~~~i~~~~~--~~~~------~~~~~~------~~~~~~~~~~G---~~~~Ki---------Kig~~- 681 (983)
|.. ++++|+|.. ++++ .+.+++ ++.++++++.| |+++|+ |+|..
T Consensus 138 G~~---------~~~lPv~~~nvinGG~ha~~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~kg~~t~vGdeg 208 (417)
T 3qn3_A 138 GAN---------ASILPVPMCNIINGGAHANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEG 208 (417)
T ss_dssp GGG---------CCEECEEEEEEEECGGGSSSSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTS
T ss_pred CCC---------CcceeeeeeeeecCcccCCCcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhcCcccccCCCC
Confidence 975 467888742 2111 122222 33455566667 999888 66641
Q ss_pred ------CChHHHHHHH-HHHHHHcC--CCcEEEEEcCCC--------------CCHHHHHHHHhh-cccCCCceeecCCC
Q 041113 682 ------ADPIKDAEVI-QEVRKKVG--HRIELRVDANRN--------------WTYQEALEFGFL-IKDCDLQYIEEPVQ 737 (983)
Q Consensus 682 ------~~~~~d~~~v-~~vr~~~g--~~~~l~vDaN~~--------------~~~~~a~~~~~~-l~~~~i~~iEeP~~ 737 (983)
.++++|+++| +++|++ | |++.|++|+|++ ||.++++++++. +++|++.|||||++
T Consensus 209 g~ap~~~~~~e~l~~i~~Air~a-Gy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i~~IEdPl~ 287 (417)
T 3qn3_A 209 GFAPNLANNTEPIDLLMTCIKKA-GYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIEDGLA 287 (417)
T ss_dssp CBCCCCSSSSHHHHHHHHHHHHT-TCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEESSSC
T ss_pred CcCCCcCCHHHHHHHHHHHHHHc-CCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcceeEEecCCC
Confidence 1357899999 899998 8 899999999986 579999999997 89999999999998
Q ss_pred --ChHHHHHHHhhc--CCcEEeCCCccC-cCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeC
Q 041113 738 --NEEDIIKYCEES--GLPVALDETIDK-FQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVS 811 (983)
Q Consensus 738 --~~~~~~~l~~~~--~ipIa~dEs~~~-~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~ 811 (983)
|++++++|++++ ++||++||++.+ .. .+..+++ ..+|++++|++++||||++++++++|+++|+++|++
T Consensus 288 ~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~-----~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vs 362 (417)
T 3qn3_A 288 ENDFEGWIKLTEKLGNKIQLVGDDLFVTNED-----ILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMS 362 (417)
T ss_dssp TTCHHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccHHHHHHHHHhhCCCCceecCCcccCCHH-----HHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 899999999988 599999999987 43 3565555 457999999999999999999999999999999999
Q ss_pred CCC-chHHHHHHHHHHHhhch
Q 041113 812 AAF-ESGLGLSAYIIFSSYLE 831 (983)
Q Consensus 812 ~~~-es~ig~~a~~~laa~~~ 831 (983)
|+. ||..+..+.++++...+
T Consensus 363 h~sgEt~d~~iadlava~~~~ 383 (417)
T 3qn3_A 363 HRSGESEDAFIADFAVALNTG 383 (417)
T ss_dssp CCSSCCSCCHHHHHHHHTTCS
T ss_pred CCCCCchHHHHHHHHHHhCCC
Confidence 976 88888888888776544
No 139
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=8.4e-35 Score=330.48 Aligned_cols=290 Identities=14% Similarity=0.131 Sum_probs=209.2
Q ss_pred eeEEEEEEEECCCCEEEEeecCcC-----------------cCcccHHHHHHHHHH-HHhHhc--cCcccccccccccCc
Q 041113 525 REGFILSLYLEDGSVGYGEVAPLE-----------------IHKENLLDAEEQLRF-LLHFMT--GAKISYFLPLLKGSF 584 (983)
Q Consensus 525 ~~~~lv~v~t~~G~~G~GE~~~~~-----------------~~~~~~~~~~~~l~~-~~~~l~--g~~~~~~~~~~~~~~ 584 (983)
.+.++|+|+|++| +||||+.... |.++++..+...++. +.|.|+ |+++.+.+.++..
T Consensus 16 ~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~G~d~~~~~~i~~~-- 92 (436)
T 2al1_A 16 NPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDF-- 92 (436)
T ss_dssp CEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHTCCTTCHHHHHHH--
T ss_pred CcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHCCCChhhHHHHHHH--
Confidence 5789999999999 9999864321 122334444455554 899999 9998876554321
Q ss_pred hhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC---CCCccccccccccceeEE--EEeecCCC----
Q 041113 585 SSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY---PLTEIDEEISKRSTSIKI--CALIDSNK---- 654 (983)
Q Consensus 585 ~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG---g~~~~~~~~~~~~~~i~~--~~~~~~~~---- 654 (983)
+...-+.. ......+|++||||||||+.||.+|+|||+||| |... .++++|+ |..+.++.
T Consensus 93 ---m~~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~-------~~~~lpvp~~n~inGg~ha~~ 162 (436)
T 2al1_A 93 ---LISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKT-------SPYVLPVPFLNVLNGGSHAGG 162 (436)
T ss_dssp ---HHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCC-------TTEEECEEEEEEEECGGGSSS
T ss_pred ---HHHhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCC-------cCceeeEEEEEeecCccccCC
Confidence 11111111 123456899999999999999999999999999 8530 0133444 44331110
Q ss_pred -----------CHHHHHHHHHHhhhcCCCEEEE----e-------ccC----CCChHHHHHHHHHHHHH---cCC--CcE
Q 041113 655 -----------SPVEVASIATTLVEEGFTAIKL----K-------VAR----RADPIKDAEVIQEVRKK---VGH--RIE 703 (983)
Q Consensus 655 -----------~~~~~~~~~~~~~~~G~~~~Ki----K-------ig~----~~~~~~d~~~v~~vr~~---~g~--~~~ 703 (983)
...+..+++.++.+.||+++|. | +|. .++++.+.++++.+|++ .|+ ++.
T Consensus 163 ~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g~v~ 242 (436)
T 2al1_A 163 ALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVK 242 (436)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTTTCE
T ss_pred ccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCcceE
Confidence 0012334556666677887773 3 331 01234455556555554 476 799
Q ss_pred EEEEc----------------------CCCCCHHHHHHH-HhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCC
Q 041113 704 LRVDA----------------------NRNWTYQEALEF-GFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDET 758 (983)
Q Consensus 704 l~vDa----------------------N~~~~~~~a~~~-~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs 758 (983)
|++|+ |+.||.++++++ .+.+++|++.|||||++ |++++++|++++++||++||+
T Consensus 243 l~vD~aase~~~n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~ 322 (436)
T 2al1_A 243 IGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL 322 (436)
T ss_dssp EEEECCGGGGEETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTT
T ss_pred EEEechhhhhccCCceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCc
Confidence 99999 555688999866 55678999999999998 899999999999999999999
Q ss_pred cc-CcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEEeCCCC-chHHHHHHHHHHHhhchh
Q 041113 759 ID-KFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKMAVVSAAF-ESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 759 ~~-~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~~~~~~-es~ig~~a~~~laa~~~~ 832 (983)
.. +.. .+..+++.+ ++++++|++++||||++++++++|+++|+.++++|+. |+.++..+.+|++...++
T Consensus 323 ~vt~~~-----~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~~~~~ 394 (436)
T 2al1_A 323 TVTNPK-----RIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQ 394 (436)
T ss_dssp TTTCHH-----HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCSE
T ss_pred ccCCHH-----HHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHhcCCc
Confidence 64 544 366666555 7999999999999999999999999999999998875 899999999999988764
No 140
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=4.6e-35 Score=332.89 Aligned_cols=302 Identities=16% Similarity=0.152 Sum_probs=216.4
Q ss_pred EeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcC-----------------cCcccHHHH
Q 041113 495 ICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLE-----------------IHKENLLDA 557 (983)
Q Consensus 495 I~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~-----------------~~~~~~~~~ 557 (983)
|++|+.+.+- .+. ..+.++|+|+|++|+ |||++.... |.++++..+
T Consensus 2 I~~v~~r~i~--------dsr--------g~~tv~V~V~t~~G~-G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~a 64 (439)
T 2akz_A 2 IEKIWAREIL--------DSR--------GNPTVEVDLYTAKGL-FRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKA 64 (439)
T ss_dssp CCEEEEEEEE--------CTT--------SCEEEEEEEEETTEE-EEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHH
T ss_pred eeEEEEEEEE--------cCC--------CCceEEEEEEECCCc-eEeeccCCCceeEEEEeeccCCCccccCCCcHHHH
Confidence 7788877652 222 157899999999999 998654311 122344444
Q ss_pred HHHHHH-HHhHhc--cCcccccccccccCchhhhhhhcCCC-CCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC---CC
Q 041113 558 EEQLRF-LLHFMT--GAKISYFLPLLKGSFSSWIWSTLGIP-ACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY---PL 630 (983)
Q Consensus 558 ~~~l~~-~~~~l~--g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG---g~ 630 (983)
...++. +.|.|+ |+++.+.+.++.. +...-+.. ......+|++||||||||+.||.+|+|||+||| |.
T Consensus 65 v~~v~~~iap~Li~~G~d~~~~~~i~~~-----m~~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~ 139 (439)
T 2akz_A 65 VDHINSTIAPALISSGLSVVEQEKLDNL-----MLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGN 139 (439)
T ss_dssp HHHHHHTHHHHHHHHCCCTTCHHHHHHH-----HHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCChhhHHHHHHH-----HHHhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCC
Confidence 555554 899999 9998876554321 11111111 123457899999999999999999999999999 86
Q ss_pred CccccccccccceeEE--EEeecCCC---------------CHHHHHHHHHHhhhcCCCEEEE----e-------ccC--
Q 041113 631 TEIDEEISKRSTSIKI--CALIDSNK---------------SPVEVASIATTLVEEGFTAIKL----K-------VAR-- 680 (983)
Q Consensus 631 ~~~~~~~~~~~~~i~~--~~~~~~~~---------------~~~~~~~~~~~~~~~G~~~~Ki----K-------ig~-- 680 (983)
. ++++|+ |..+.++. ...+..+++.++.++||+++|. | +|.
T Consensus 140 ~---------~~~lpvp~~~~inGg~ha~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdeg 210 (439)
T 2akz_A 140 S---------DLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEG 210 (439)
T ss_dssp C---------SCCBCEEEEEEEECGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTS
T ss_pred C---------CceeEEEEEEEecCccccccccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCccc
Confidence 4 234554 33331110 0112234556666677887773 3 331
Q ss_pred --CCChHHHHHHHHHHHHH---cCC--CcEEEEEc---------------------CCCCCHHHHHHH-HhhcccCCCce
Q 041113 681 --RADPIKDAEVIQEVRKK---VGH--RIELRVDA---------------------NRNWTYQEALEF-GFLIKDCDLQY 731 (983)
Q Consensus 681 --~~~~~~d~~~v~~vr~~---~g~--~~~l~vDa---------------------N~~~~~~~a~~~-~~~l~~~~i~~ 731 (983)
.++++.+.++++.||++ +|+ ++.|++|+ |+.||.++++++ .+.+++|++.|
T Consensus 211 g~~p~~~~~~e~l~~i~~ai~~~G~~g~v~l~vD~a~se~~~~g~y~l~~~~~~~~~~~~t~~e~~~~~~~ll~~y~i~~ 290 (439)
T 2akz_A 211 GFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPTDPSRYITGDQLGALYQDFVRDYPVVS 290 (439)
T ss_dssp CBCCSCCCHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEECTTTTSSCCGGGCBCHHHHHHHHHHHHHHSCEEE
T ss_pred CcCCCcccHHHHHHHHHHHHHHcCCccceEEEEechHhhhccCCeeEEeccccccccccCCHHHHHHHHHHHHHhCCCcE
Confidence 01234455566666554 476 79999999 445788998777 45578999999
Q ss_pred eecCCC--ChHHHHHHHhhcCCcEEeCCCc-cCcCCChHHHHHhhcCCC-ceEEEEcCCCcCCHHHHHHHHHHHHHcCCc
Q 041113 732 IEEPVQ--NEEDIIKYCEESGLPVALDETI-DKFQKDPLNMLEKYAHPG-IVAIVIKPSVIGGFENAGLIARWAQRHGKM 807 (983)
Q Consensus 732 iEeP~~--~~~~~~~l~~~~~ipIa~dEs~-~~~~~~~~~~~~~~~~~~-~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~ 807 (983)
||||++ |++++++|++++++||++||+. .+.. .++.+++.+ ++++++|++++||||++++++++|+++|+.
T Consensus 291 IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~-----~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~ 365 (439)
T 2akz_A 291 IEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPK-----RIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWG 365 (439)
T ss_dssp EECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHH-----HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCE
T ss_pred EECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHH-----HHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCe
Confidence 999998 8999999999999999999985 4654 466666555 799999999999999999999999999999
Q ss_pred EEeCCCC-chHHHHHHHHHHHhhchh
Q 041113 808 AVVSAAF-ESGLGLSAYIIFSSYLEL 832 (983)
Q Consensus 808 ~~~~~~~-es~ig~~a~~~laa~~~~ 832 (983)
++++|++ ||+++..+.+|++...++
T Consensus 366 ~~~sh~~gEt~~~~iA~lava~~~~~ 391 (439)
T 2akz_A 366 VMVSHRSGETEDTFIADLVVGLCTGQ 391 (439)
T ss_dssp EEEECCSBCCSCCHHHHHHHHHTCSE
T ss_pred EEeecCCCccHHHHHHHHHHHhcCCc
Confidence 9998865 899999999999988764
No 141
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=99.87 E-value=4.3e-21 Score=212.34 Aligned_cols=301 Identities=14% Similarity=0.110 Sum_probs=201.0
Q ss_pred ceeEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc------------------Cccc
Q 041113 492 ICKICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI------------------HKEN 553 (983)
Q Consensus 492 ~mkI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~------------------~~~~ 553 (983)
.|.|++|..+.+- .+.| .++|-|+|+|++|.. .+ +.|.+. .+..
T Consensus 5 ~m~I~~i~ar~il--------dsrG--------nptvev~v~~~~g~~-ra-~vPsgaStG~~Ea~elrd~d~~~y~Gkg 66 (441)
T 3qtp_A 5 SMSIQKVHAREIL--------DSRG--------NPTIEVEITTGKGMF-RS-CVPSGASTGVHEAVELRDGDKKRYGGKG 66 (441)
T ss_dssp TTBCCEEEEEEEE--------CTTS--------CEEEEEEEEETTEEE-EE-ECCCCCSCCSSSCCCCCCCCTTSGGGTC
T ss_pred CcEEEEEEEEEEE--------CCCC--------CEEEEEEEEECCCcE-EE-ecccCCCCCcceeEeecCCCcccccCcc
Confidence 4689999988762 2232 788999999999876 44 333321 1111
Q ss_pred HH-HHHHHHHHHHhHhccCcccc---cccccccCchhhhhhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcC-
Q 041113 554 LL-DAEEQLRFLLHFMTGAKISY---FLPLLKGSFSSWIWSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILY- 628 (983)
Q Consensus 554 ~~-~~~~~l~~~~~~l~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLG- 628 (983)
+. .+...-..|.|.|+|.++.+ +..++...+.+..++ ..-..|+.||.+|++.+.|+..|+|||++||
T Consensus 67 v~kAv~~vn~~iap~Lig~~~~dQ~~iD~~m~~lDgT~nks-------~lGaNail~vSlAvakAaA~~~~~PLy~~l~~ 139 (441)
T 3qtp_A 67 VLKAVENVNTIIGPALLGKNVLNQAELDEMMIKLDGTNNKG-------KLGANAILGCSMSICRAAAAEKGLPLYKYLAE 139 (441)
T ss_dssp CHHHHHHHHHTHHHHHTTCBTTCHHHHHHHHHHHHCSTTCT-------TTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHhccCCCCcc-------CCCccchhhHHHHHHHHHHHhcCCcHHHHHHh
Confidence 22 23322245899999998875 222332222111111 2335789999999999999999999999997
Q ss_pred --CCCccccccccccceeEEEEeecCC-------------------CCHHH-------HHHHHHHhhh-c-CCCEEEEec
Q 041113 629 --PLTEIDEEISKRSTSIKICALIDSN-------------------KSPVE-------VASIATTLVE-E-GFTAIKLKV 678 (983)
Q Consensus 629 --g~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~~~~-------~~~~~~~~~~-~-G~~~~KiKi 678 (983)
|.. ...-++|+...++++ .+..+ +-..++..++ . |..+ ..+
T Consensus 140 l~g~~-------~~~lPvP~~nvinGG~ha~n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~--t~v 210 (441)
T 3qtp_A 140 LTGHK-------EMTMPVPCFNVINGGAHAGNALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDA--TNV 210 (441)
T ss_dssp HHTCC-------CCCBCEEEEEEEECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGG--GCB
T ss_pred hcCCC-------CceeccceEeeecCCccCCCccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCccc--ccc
Confidence 432 013456665544211 12222 1222233332 1 4211 122
Q ss_pred cCC----C---ChHHHHHHHHHHHHHcC--CCcEEEEEcC---------C-----------------CCCHHHHHHHHhh
Q 041113 679 ARR----A---DPIKDAEVIQEVRKKVG--HRIELRVDAN---------R-----------------NWTYQEALEFGFL 723 (983)
Q Consensus 679 g~~----~---~~~~d~~~v~~vr~~~g--~~~~l~vDaN---------~-----------------~~~~~~a~~~~~~ 723 (983)
|.. + +.++-++.|...-+..| .++.|.+|+- + .+|.++++++.+.
T Consensus 211 gdEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~ 290 (441)
T 3qtp_A 211 GDEGGFAPNVSGAREALDLLVEAIAKAGYTGKIEIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVD 290 (441)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHH
T ss_pred cCCcccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHH
Confidence 321 1 23455666655555555 5788989862 1 2478999988777
Q ss_pred -cccCCCceeecCCC--ChHHHHHHHhhcC-CcEEeCCCcc-CcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHH
Q 041113 724 -IKDCDLQYIEEPVQ--NEEDIIKYCEESG-LPVALDETID-KFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLI 797 (983)
Q Consensus 724 -l~~~~i~~iEeP~~--~~~~~~~l~~~~~-ipIa~dEs~~-~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~ 797 (983)
+++|+|.|||||++ |+++|++|+++++ +||++||+.. +.. .+...++ ..++++++|++++||+|+++++
T Consensus 291 lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~-----~i~~~Ie~~a~n~IlIKvnqiGGITEalka 365 (441)
T 3qtp_A 291 YGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPA-----RVQMAMDKNACNSVLIKVNQIGTLTETFKT 365 (441)
T ss_dssp HHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHHTCCSEEEECGGGTCCHHHHHHH
T ss_pred HhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHH-----HHHHHHHcCCCCEEEecccccccHHHHHHH
Confidence 68999999999998 8999999999996 9999999854 443 3555554 4579999999999999999999
Q ss_pred HHHHHHcCCcEEeCCC-CchHHHHHHHHHHHhhch
Q 041113 798 ARWAQRHGKMAVVSAA-FESGLGLSAYIIFSSYLE 831 (983)
Q Consensus 798 ~~~A~~~gi~~~~~~~-~es~ig~~a~~~laa~~~ 831 (983)
+++|+++|+.+|++|+ .||..+..+.++++...+
T Consensus 366 a~lA~~~G~~vmvsHrsgETeDt~iAdLAVal~~g 400 (441)
T 3qtp_A 366 IKMAQEKGWGVMASHRSGETEDTFIADLVVGLNCK 400 (441)
T ss_dssp HHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCE
T ss_pred HHHHHHcCCeEEEeCCCCCccHhHHHHHHHHhCCC
Confidence 9999999999999886 488888888888776544
No 142
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=99.82 E-value=2.5e-19 Score=198.08 Aligned_cols=304 Identities=16% Similarity=0.123 Sum_probs=194.9
Q ss_pred eEeEEEEEEEEeeCCCCCccccccccCcceeeeEEEEEEEECCCCEEEEeecCcCc------------------CcccH-
Q 041113 494 KICRMEYSLYRIQLCAPPTSSYIDHNRSRFCREGFILSLYLEDGSVGYGEVAPLEI------------------HKENL- 554 (983)
Q Consensus 494 kI~~v~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~lv~v~t~~G~~G~GE~~~~~~------------------~~~~~- 554 (983)
+|++|..+.+- .+.| .++|-|+|+|++|.. .+ +.|.+. .+..+
T Consensus 3 ~I~~i~areil--------dSrG--------npTvEv~v~~~~G~~-ra-~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~ 64 (452)
T 3otr_A 3 VIKDIVAREIL--------DSRG--------NPTIEVDVSTEGGVF-RA-AVPSGASTGIYEALELRDKDPKRYLGKGVL 64 (452)
T ss_dssp CCCEEEEEEEE--------CTTS--------CEEEEEEEEETTEEE-EE-ECCCCBSSCSSSCBCCCCCCTTSGGGTCCH
T ss_pred cceEEEEEEEE--------cCCC--------CEEEEEEEEECCccE-EE-eccccCCCCcceEEeecCCCcccccCccHH
Confidence 78999988762 2232 788999999998865 44 233321 11112
Q ss_pred HHHHHHHHHHHhHhccCcccc---cccccc-cCchhhh-hhhcCCCCCcchhhHHHHHHHHHHHHHHHHcCCChhhhcCC
Q 041113 555 LDAEEQLRFLLHFMTGAKISY---FLPLLK-GSFSSWI-WSTLGIPACEIFPSVRCGLEMAILNAIAVKHGSSFLNILYP 629 (983)
Q Consensus 555 ~~~~~~l~~~~~~l~g~~~~~---~~~~~~-~~~~~~~-~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~pv~~lLGg 629 (983)
..+...-..|.|.|+|.++.+ +..++. ..+.+.. |. +.-..+-..|+-||.+|+..+.|...|+|||+.||+
T Consensus 65 kAv~~vn~~Iap~Lig~d~~dQ~~iD~~m~~~lDgT~n~~~---~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~ 141 (452)
T 3otr_A 65 NAVEIVRQEIKPALLGKDPCDQKGIDMLMVEQLDGTKNEWG---YSKSKLGANAILGVSIACCRAGAASKGLPLYKYIAT 141 (452)
T ss_dssp HHHHHHHHTHHHHHTTCCTTCHHHHHHHHHHTTTCCEETTE---ECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHhcCCCCccc---ccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 223322245899999998875 333333 3222111 00 001123367899999999999999999999999983
Q ss_pred ---CCccccccccccceeEEEEeecC-------------------CCCHHH-------HHHHHHHhhh-c-CCCEEEEec
Q 041113 630 ---LTEIDEEISKRSTSIKICALIDS-------------------NKSPVE-------VASIATTLVE-E-GFTAIKLKV 678 (983)
Q Consensus 630 ---~~~~~~~~~~~~~~i~~~~~~~~-------------------~~~~~~-------~~~~~~~~~~-~-G~~~~KiKi 678 (983)
.. +. ...-++|+...+++ ..+..+ +-..++..++ . |..+ ..+
T Consensus 142 l~g~~--~~---~~~lPvP~~nvinGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~--t~v 214 (452)
T 3otr_A 142 LAGKT--ID---KMVMPVPFFNVINGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDA--TNV 214 (452)
T ss_dssp HHTCC--SS---SEEECEECEEEEECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGG--GCB
T ss_pred hcCCC--Cc---ceecccceEEEecCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcc--ccc
Confidence 21 00 01234554443321 112222 1222233332 1 4211 122
Q ss_pred cCC----C---ChHHHHHHHHHHHHHcC--CCcEEEEEcCC------------------------CCCHHHHHHHHhh-c
Q 041113 679 ARR----A---DPIKDAEVIQEVRKKVG--HRIELRVDANR------------------------NWTYQEALEFGFL-I 724 (983)
Q Consensus 679 g~~----~---~~~~d~~~v~~vr~~~g--~~~~l~vDaN~------------------------~~~~~~a~~~~~~-l 724 (983)
|.. + +.++-++.|...-+..| .++.|-+|+-. .+|.+|++++.+. +
T Consensus 215 gDEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~ll 294 (452)
T 3otr_A 215 GDEGGFAPNVATAEEALNLLVEAIKAAGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWL 294 (452)
T ss_dssp CTTSCBCCCCCSHHHHHHHHHHHHHHHTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHH
Confidence 321 1 23445555544433444 47888888621 2478999999976 6
Q ss_pred ccCCCceeecCCC--ChHHHHHHHhhcC--CcEEeCCCcc-CcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHH
Q 041113 725 KDCDLQYIEEPVQ--NEEDIIKYCEESG--LPVALDETID-KFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIA 798 (983)
Q Consensus 725 ~~~~i~~iEeP~~--~~~~~~~l~~~~~--ipIa~dEs~~-~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~ 798 (983)
++|+|.|||||++ |+++|++|+++++ +||++||+.. +.. .+...++ ..++.+++|++++||+|++++++
T Consensus 295 e~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~-----~i~~~Ie~~a~n~IlIKvnQIGgITEalka~ 369 (452)
T 3otr_A 295 KKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNIL-----RIEKALKDKACNCLLLKVNQIGSVTEAIEAC 369 (452)
T ss_dssp HHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHH-----HHHHHHHHTCCSEEEECHHHHCCHHHHHHHH
T ss_pred hhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHH-----HHHHHHhcCCCCEEEeeccccccHHHHHHHH
Confidence 8999999999999 8999999999987 9999999854 432 3555554 45799999999999999999999
Q ss_pred HHHHHcCCcEEeCCC-CchHHHHHHHHHHHhhc
Q 041113 799 RWAQRHGKMAVVSAA-FESGLGLSAYIIFSSYL 830 (983)
Q Consensus 799 ~~A~~~gi~~~~~~~-~es~ig~~a~~~laa~~ 830 (983)
++|+++|+.+|++|. -||.-...+.++++...
T Consensus 370 ~lA~~~G~~vmvshrSGETeD~~iAdLaVgl~~ 402 (452)
T 3otr_A 370 LLAQKSGWGVQVSHRSGETEDSFIADLVVGLRC 402 (452)
T ss_dssp HHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTC
T ss_pred HHHHHcCCeEEEeCCCCCCchhHHHHHHHHcCC
Confidence 999999999999985 47776666666666543
No 143
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=99.69 E-value=9.5e-17 Score=159.67 Aligned_cols=137 Identities=14% Similarity=0.136 Sum_probs=104.7
Q ss_pred cchhhHHHHHHHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhcc--ccccccchh
Q 041113 71 YTYCQMAEVLELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQ--NILFLDHLD 147 (983)
Q Consensus 71 ~~~~~i~~~~~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp--~~~~~g~~g 147 (983)
++...+++++++|++||||+|++|+|+. .++.+++++|+|++|+||++|++ | ||+||++|| +++.+|.+|
T Consensus 19 ~~~~~v~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~-g------kg~~~~~hp~~~~~~~G~~G 91 (170)
T 3cf4_G 19 SKAVSPEMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAATGS-S------LAVLADKDVDAKYINAHMLG 91 (170)
T ss_dssp CEECCHHHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTT-T------HHHHTTSSSCEEECCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEECcc-c------CcccCCCChhhhcceeeecc
Confidence 3445699999999999999999999986 45678999999999999999997 6 899999999 842278888
Q ss_pred hhccCccc---cccCCCCEEEEeCCcc--ccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeE--EE-EcCHHHHHHHH
Q 041113 148 HALLSESV---KDWIQFDVIIQIGSRI--TSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTH--RI-QSTIVQFVDFL 219 (983)
Q Consensus 148 ~~~~~~~~---~~~~~aDlvl~iG~~~--~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~--~i-~~d~~~~l~~L 219 (983)
..++...+ ..+++||+||++|+++ ++..+..|....+ .++|.++.+ +.++. .+ .-..++++++|
T Consensus 92 ~~~~~~~~~~~~~~~~aDlvl~iG~~~~~~~~~t~~~~~~~~-~~iI~i~~~-------~~~~~~~~~~~l~~~~~l~~L 163 (170)
T 3cf4_G 92 FYLTDPKWPGLDGNGNYDMIITIGFKKFYINQVLSAAKNFSN-LKTIAIERG-------YIQNATMSFGNLSKADHYAAL 163 (170)
T ss_dssp HHTTCTTCCCSSSSCCCSEEEEESCCHHHHHHHHHHHHHHCC-CCEEECSSS-------CCTTSSEECCCCCHHHHHHHH
T ss_pred ccCChhhhhHHHHhhcCCEEEEECCccCccccccccccccCC-CeEEEECCC-------cccchhhhhccCCHHHHHHHH
Confidence 88888887 8889999999999999 8777765654333 567744432 22211 11 11467777777
Q ss_pred Hhc
Q 041113 220 LKV 222 (983)
Q Consensus 220 ~~~ 222 (983)
.+.
T Consensus 164 ~~~ 166 (170)
T 3cf4_G 164 DEL 166 (170)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 144
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.69 E-value=6.4e-17 Score=204.95 Aligned_cols=180 Identities=11% Similarity=0.052 Sum_probs=137.8
Q ss_pred CCHHHHHHHHHhhcCCCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCC---cceeE-eecCCCCCccchHHH
Q 041113 256 LTEPHVAHELSRALTSNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPH---QWIRV-AGNRGASGIDGLLST 331 (983)
Q Consensus 256 ~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~-~~~~G~mG~~g~lpa 331 (983)
+.+..+++.|.+.++++.+|+.|+|. +.+|+.++... |.+.- .++ .+.+. ..+.|+||+ |+|+
T Consensus 814 Cge~~~ik~l~ql~g~~~iian~tGc----~siw~~~~~~~---~~~~~----~~g~~p~~~~Slf~~~a~mG~--G~~~ 880 (1231)
T 2c42_A 814 CGETPYVRVITQLFGERMFIANATGC----SSIWGASAPSM---PYKTN----RLGQGPAWGNSLFEDAAEYGF--GMNM 880 (1231)
T ss_dssp CSSHHHHHHHHHHHGGGEEEEECSSH----HHHHHHBTTCC---CBCCC----TTSCCCEEECCCSTTHHHHHH--HHHH
T ss_pred CCcHHHHHHHHHhcCCCeEEEecCch----HHHHHhhcccC---Ccccc----cCCCCcceecccCcchHHHHH--HHHH
Confidence 45778999999999999999999999 88888765321 11110 011 22210 125589999 9999
Q ss_pred ---------------------------HH--------------------hhhhcc-C----------------ceEEEEE
Q 041113 332 ---------------------------AI--------------------GFAVGC-N----------------KHVLCVV 347 (983)
Q Consensus 332 ---------------------------ai--------------------GaalA~-~----------------~~vv~i~ 347 (983)
|| |++++. + ++||+|.
T Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~w~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~Vv~i~ 960 (1231)
T 2c42_A 881 SMFARRTHLADLAAKALESDASGDVKEALQGWLAGKNDPIKSKEYGDKLKKLLAGQKDGLLGQIAAMSDLYTKKSVWIFG 960 (1231)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTCCSHHHHHHHTTGGGTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhcCCchHHHHHhhhhhhccCCcEEEEe
Confidence 99 999974 3 7899999
Q ss_pred ccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCcccccc-cc---cc-CCCCCHHHHHHHcCCce
Q 041113 348 GDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQ-YF---YT-THNISIQNLCLAHGLNH 421 (983)
Q Consensus 348 GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~-~~---~~-~~~~df~~la~a~G~~~ 421 (983)
||| +|+|++|||.|+++ +++||++||+||+.|++++...... . ..... .+ +. ...+||.++|++||+.+
T Consensus 961 GDG~~~~mg~~eL~ta~~--~~~~v~iiVlnN~~yg~tg~Q~s~~-t--~~~~~t~~~~~g~~~~~~D~~~iA~a~G~~~ 1035 (1231)
T 2c42_A 961 GDGWAYDIGYGGLDHVLA--SGEDVNVFVMDTEVYSNTGGQSSKA-T--PTGAVAKFAAAGKRTGKKDLARMVMTYGYVY 1035 (1231)
T ss_dssp EHHHHHTTTHHHHHHHHH--TTCSCEEEEEECSSBTTTTCBCCTT-S--CTTCCBBTBTTCCSSCCCCHHHHHHTTSSSE
T ss_pred CcHHHHHcchHHHHHHHH--hCCCeEEEEEECHHHHhHHhhhccC-C--CCCceeeecccCCCCCchhHHHHHHHCCCCE
Confidence 999 99999999999999 9999999999999999997421110 0 00000 01 11 13589999999999999
Q ss_pred ee---e-CCHHHHHHHHHhhhccCCCEEEEEEcCcc
Q 041113 422 VQ---V-KTKVELEEALSMSQHLGTDRVIEVESCID 453 (983)
Q Consensus 422 ~~---v-~~~~eL~~aL~~a~~~~~p~lIeV~~~~~ 453 (983)
++ + +++++|.++|++|++.+||+||||.++..
T Consensus 1036 va~~~v~~~~~~l~~al~eAl~~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1036 VATVSMGYSKQQFLKVLKEAESFPGPSLVIAYATCI 1071 (1231)
T ss_dssp EEEECTTTCHHHHHHHHHHHHHSSSCEEEEEECCCG
T ss_pred EEEEeccCCHHHHHHHHHHHHhcCCCEEEEEeecCc
Confidence 85 3 59999999999999999999999999876
No 145
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=99.61 E-value=2.3e-15 Score=167.59 Aligned_cols=151 Identities=16% Similarity=0.163 Sum_probs=118.1
Q ss_pred EeecCCCCCccchHHHHHhhhhcc-----CceEEEEEccchhhhc--cchHHHHHhhccCCCEEEEEEeCCCCccccCCC
Q 041113 316 VAGNRGASGIDGLLSTAIGFAVGC-----NKHVLCVVGDISFLHD--TNGLAILKQRMKRKPILMLVINNHGGAIFSLLP 388 (983)
Q Consensus 316 ~~~~~G~mG~~g~lpaaiGaalA~-----~~~vv~i~GDGsf~~~--~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~ 388 (983)
+.++.|+||+ ++|.|+|+++|. ++.|||++|||+|++. ..+|.|+++ +++|+++||.|| +|++...
T Consensus 137 ~~~~~g~lG~--~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~--~~lpvi~vv~NN-~~gi~~~-- 209 (368)
T 1w85_A 137 VLPPQIIIGA--QYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGA--FKAPAIFVVQNN-RFAISTP-- 209 (368)
T ss_dssp BCCCCCSTTH--HHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHHHHHH--TTCCEEEEEEEC-SEETTEE--
T ss_pred cCCCccccCc--cccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHHHHHH--HCcCEEEEEEcC-Cccceec--
Confidence 4577899999 999999999995 6899999999999985 357999998 999988888777 5887521
Q ss_pred CCCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEEEcCcc-------cc
Q 041113 389 IADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEVESCID-------AN 455 (983)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV~~~~~-------~~ 455 (983)
... ....+||.++|++||+++++|+ +++++.+++++|++ .++|+|||+.|.+. ++
T Consensus 210 ---------~~~---~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~~~Dd 277 (368)
T 1w85_A 210 ---------VEK---QTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDD 277 (368)
T ss_dssp ---------GGG---TCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC-
T ss_pred ---------ccc---ccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCCCCCCCC
Confidence 011 1135799999999999999998 79999999999875 57999999998651 11
Q ss_pred h---------------------------------HHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 041113 456 A---------------------------------TFHSMLRKFARQSADHTLNVLSQFSVPDT 485 (983)
Q Consensus 456 ~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (983)
+ ..+.++.+++++.+..|+..+.+++.|+.
T Consensus 278 p~~yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~ 340 (368)
T 1w85_A 278 PTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKV 340 (368)
T ss_dssp -----CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCH
T ss_pred ccccCCHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 1 22334556667778888888888777753
No 146
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=99.60 E-value=2.6e-15 Score=168.03 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=111.9
Q ss_pred ecCCCCCccchHHHHHhhhhc----c-CceEEEEEccchhhhc-cch-HHHHHhhccCCCEEEEEEeCCCCccccCCCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVG----C-NKHVLCVVGDISFLHD-TNG-LAILKQRMKRKPILMLVINNHGGAIFSLLPIA 390 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA----~-~~~vv~i~GDGsf~~~-~~e-L~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~ 390 (983)
.+.|.+|. ++|.|+|+++| . +++|||++|||+|+|+ ++| |.++++ +++|+++||.||+ |++...
T Consensus 141 ~~~g~lG~--~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~--~~lpvi~vv~NN~-~gi~~~---- 211 (367)
T 1umd_A 141 TVASPIAS--HVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAV--QGAPAVFIAENNF-YAISVD---- 211 (367)
T ss_dssp CCCSSTTT--THHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHH--TTCSEEEEEEECS-EETTEE----
T ss_pred CCCchhhh--hhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHHHHHH--hCcCEEEEEecCC-eeeccC----
Confidence 34466666 67777776665 4 7899999999999999 999 999998 9999888888887 988521
Q ss_pred CCCCccccccccccCCCCCHHHHHHHcCCceeeeCCHHHH------HHHHHhhhccCCCEEEEEEcCcc------c----
Q 041113 391 DRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVKTKVEL------EEALSMSQHLGTDRVIEVESCID------A---- 454 (983)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~~~eL------~~aL~~a~~~~~p~lIeV~~~~~------~---- 454 (983)
... ....+||.+++++||+++++|+..+.+ +.+++++.+.++|+||||.|.+. +
T Consensus 212 -------~~~---~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~ 281 (367)
T 1umd_A 212 -------YRH---QTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSR 281 (367)
T ss_dssp -------HHH---HCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGG
T ss_pred -------hhh---ccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCCCCCCCCCccc
Confidence 111 113579999999999999999976666 56666666678999999999871 1
Q ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 041113 455 -----------------------------NATFHSMLRKFARQSADHTLNVLSQFSVPDT 485 (983)
Q Consensus 455 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (983)
+...+.++.+++.+.+..++..+..++.|+.
T Consensus 282 Yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~ 341 (367)
T 1umd_A 282 YRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPP 341 (367)
T ss_dssp TSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCG
T ss_pred cCCHHHHHHHHcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 1222335556677778888888887777754
No 147
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=99.60 E-value=3.2e-16 Score=154.28 Aligned_cols=109 Identities=19% Similarity=0.303 Sum_probs=83.9
Q ss_pred hHHHH-HHHHhcCCceEEEEccCCC-hhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhh-hc-c--ccccccchhh
Q 041113 75 QMAEV-LELVQGVNKGLLLVGAVHN-EDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLE-TE-Q--NILFLDHLDH 148 (983)
Q Consensus 75 ~i~~~-~~~L~~AkrPvIl~G~g~~-~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~-~h-p--~~~~~g~~g~ 148 (983)
.++++ +++|++||||+|++|+ +. .++.+++++|+|+ ++||++|.+ | ||.||+ +| | ++++++..+.
T Consensus 23 ~i~~a~a~lI~~AkRPvIl~Gg-v~~~~A~~eL~~~ae~-~iPVvtT~~-g------~g~~~~~~~~p~~~~~G~~~~g~ 93 (174)
T 1ytl_A 23 EKGKPVANMIKKAKRPLLIVGP-DMTDEMFERVKKFVEK-DITVVATGS-A------ITRFIDAGLGEKVNYAVLHELTQ 93 (174)
T ss_dssp CCHHHHHHHHHHCSSEEEEECS-CCCHHHHHHHHHHHTS-SSEEEEETT-H------HHHHHHTTCGGGSEEECHHHHHH
T ss_pred cHHHHHHHHHHcCCCCEEEECC-CCCccHHHHHHHHHHc-CCCEEEccc-c------cCcCCCCCCCccccccccHHHHH
Confidence 37788 9999999999999999 86 4567899999999 999999998 6 899999 99 8 4333336666
Q ss_pred hccCcccccc---CCCCEEEEeCCccccHHH-HHHHHhcCC-ceEEEEc
Q 041113 149 ALLSESVKDW---IQFDVIIQIGSRITSKRI-SQMIEECFP-CTYILVD 192 (983)
Q Consensus 149 ~~~~~~~~~~---~~aDlvl~iG~~~~~~~~-~~~~~~~~~-~~~i~id 192 (983)
.+...++..+ ++|||||++|+|+.+..+ ++....+.+ .++||||
T Consensus 94 ~~~~~~~~~~~~~~~aDLvI~iG~rf~~~~~~t~~~~~fap~akii~Id 142 (174)
T 1ytl_A 94 FLLDPDWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAID 142 (174)
T ss_dssp HHHSTTCCCTTSSCCCSEEEEESCCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HhhhhhhhhhcccCCCCEEEEECCcCCccccccccccccCCCCeEEEeC
Confidence 6666655555 899999999999963222 223344544 5688865
No 148
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=99.59 E-value=8.3e-15 Score=164.68 Aligned_cols=145 Identities=15% Similarity=0.102 Sum_probs=112.2
Q ss_pred eecCCCCCccchHHHHHhhhhcc-----CceEEEEEccchhhhc--cchHHHHHhhccCCCEEEEEEeCCCCccccCCCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC-----NKHVLCVVGDISFLHD--TNGLAILKQRMKRKPILMLVINNHGGAIFSLLPI 389 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~-----~~~vv~i~GDGsf~~~--~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~ 389 (983)
.++.|+||+ ++|.|+|+++|. ++.|||++|||+|++. .++|.|+++ |++|+ |+|+|||+|++....
T Consensus 177 ~~~~g~lG~--~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~--~~lpv-i~Vv~NN~~gi~~~~-- 249 (407)
T 1qs0_A 177 FTISGNLAT--QFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHV--YRAPV-ILNVVNNQWAISTFQ-- 249 (407)
T ss_dssp CCCCSSSSH--HHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHH--HTCCE-EEEEEECSEETTEEG--
T ss_pred ccccccccc--chhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHHHHHH--HCcCE-EEEEECCCcceeecc--
Confidence 466799999 999999999984 6899999999999986 578999998 99995 555555589886321
Q ss_pred CCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEEEcCcc------c---
Q 041113 390 ADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEVESCID------A--- 454 (983)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV~~~~~------~--- 454 (983)
... ....+||.++|++||+++++|+ +++++.+++++|++ .++|+|||+.|.+. +
T Consensus 250 ---------~~~--~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~ 318 (407)
T 1qs0_A 250 ---------AIA--GGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPS 318 (407)
T ss_dssp ---------GGG--TTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGG
T ss_pred ---------ccc--cCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCcCCCCCcc
Confidence 111 1135799999999999999999 67888888888764 58999999999761 1
Q ss_pred ------------------------------chHHHHHHHHHHHHHHHHHHhhhhc
Q 041113 455 ------------------------------NATFHSMLRKFARQSADHTLNVLSQ 479 (983)
Q Consensus 455 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (983)
+...+.++.+++++.+.+|+..+.+
T Consensus 319 ~Yr~~~e~~~~~~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~ 373 (407)
T 1qs0_A 319 KYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQ 373 (407)
T ss_dssp GTSCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHhcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1233445667777778888888876
No 149
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.56 E-value=1.5e-14 Score=162.83 Aligned_cols=117 Identities=18% Similarity=0.204 Sum_probs=98.7
Q ss_pred eecCCCCCccchHHHHHhhhhcc-----CceEEEEEccchhhhcc--chHHHHHhhccCCCEEEEEEeCCCCccccCCCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC-----NKHVLCVVGDISFLHDT--NGLAILKQRMKRKPILMLVINNHGGAIFSLLPI 389 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~-----~~~vv~i~GDGsf~~~~--~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~ 389 (983)
..+.|+||+ ++|.|+|+++|. ++.|||++|||+|+|+. ++|.|+++ +++|+++||.|| +|++....
T Consensus 158 ~~~~g~lG~--~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~--~~lpvi~vv~NN-~~~i~~~~-- 230 (400)
T 2bfd_A 158 VTISSPLAT--QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAAT--LECPIIFFCRNN-GYAISTPT-- 230 (400)
T ss_dssp CCCCSSTTT--HHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHH--TTCCEEEEEEEC-SEETTEEG--
T ss_pred cccCccccc--cccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHHHHHH--HCcCEEEEEECC-ceeeeecc--
Confidence 456699999 999999999985 58899999999999988 99999998 999988888777 88886321
Q ss_pred CCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEEEcCc
Q 041113 390 ADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEVESCI 452 (983)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV~~~~ 452 (983)
.. ....+||.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|.+
T Consensus 231 ---------~~---~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR 287 (400)
T 2bfd_A 231 ---------SE---QYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR 287 (400)
T ss_dssp ---------GG---TCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred ---------cc---cCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeee
Confidence 10 1135799999999999999998 68899999988875 6899999999954
No 150
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=99.53 E-value=5e-14 Score=156.25 Aligned_cols=148 Identities=12% Similarity=0.135 Sum_probs=112.5
Q ss_pred eecCCCCCccchHHHHHhhhhcc-----CceEEEEEccchhhhc--cchHHHHHhhccCCCEEEEEEeCCCCccccCCCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC-----NKHVLCVVGDISFLHD--TNGLAILKQRMKRKPILMLVINNHGGAIFSLLPI 389 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~-----~~~vv~i~GDGsf~~~--~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~ 389 (983)
.++.|+||+ ++|.|+|+++|. ++.|||++|||+|++. ..+|.|++. +++|+++||.|| +|++....
T Consensus 136 ~~~~g~~G~--~lp~A~G~A~A~~~~~~~~~vv~~~GDGa~~~G~~~Ealn~A~~--~~lpvi~vv~NN-~~g~~t~~-- 208 (365)
T 2ozl_A 136 YGGNGIVGA--QVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAAL--WKLPCIFICENN-RYGMGTSV-- 208 (365)
T ss_dssp CCCCCSTTT--HHHHHHHHHHHHHHHTCCCCEEEEEETTGGGCHHHHHHHHHHHH--TTCCEEEEEEEC-SEETTEEH--
T ss_pred CCCcchhhh--hhHHHHHHHHHHHhcCCCceEEEEECchhhhccHHHHHHHHHHH--HCcCEEEEEECC-CcccCCCc--
Confidence 466689999 999999999996 6899999999999985 457999998 999987777555 78875321
Q ss_pred CCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEEEcCcc------c---
Q 041113 390 ADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEVESCID------A--- 454 (983)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV~~~~~------~--- 454 (983)
.+. ...+||.+ +++|+++++|+ +++++.+++++|++ .++|+|||+.+.+. +
T Consensus 209 ---------~~~---~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~ 274 (365)
T 2ozl_A 209 ---------ERA---AASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHEMSDPGV 274 (365)
T ss_dssp ---------HHH---CSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCSSCSSTTCCSC
T ss_pred ---------ccc---cCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCCCCCCCCc
Confidence 111 12467776 79999999998 79999999888763 68999999999650 0
Q ss_pred ---c----------------------------hHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 041113 455 ---N----------------------------ATFHSMLRKFARQSADHTLNVLSQFSVPDT 485 (983)
Q Consensus 455 ---~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (983)
. ...+.++.+++++.+..|+..+.+++.|+.
T Consensus 275 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~ 336 (365)
T 2ozl_A 275 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPL 336 (365)
T ss_dssp SSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCG
T ss_pred ccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 1 122334456667778888888888887754
No 151
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.50 E-value=3.9e-14 Score=170.12 Aligned_cols=193 Identities=16% Similarity=0.134 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHhhcC-CCceEEEecCcchhhhhhhcCCCcccccccccccccCCCCC--cceeEeecCCCCCccchHHHH
Q 041113 256 LTEPHVAHELSRALT-SNSALFVGNSMAIRDLDMYGRNWTTCTHTVADIMLNSEFPH--QWIRVAGNRGASGIDGLLSTA 332 (983)
Q Consensus 256 ~~~~~~~~~l~~~l~-~~~iv~~d~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~G~mG~~g~lpaa 332 (983)
+....++.+|...+. +++.++.|.|.....+.++..+...+ ...|.+..-+..|. ...+...+.|+||+ ++|+|
T Consensus 56 lg~v~l~~aL~~~~~~~~D~~v~~~GH~~y~~~~l~G~~~~~-~~~r~~~g~~G~p~~~~s~~~~~~~G~~G~--gl~~A 132 (629)
T 2o1x_A 56 LGAVDIITALHYVLDSPRDRILFDVGHQAYAHKILTGRRDQM-ADIKKEGGISGFTKVSESEHDAITVGHAST--SLTNA 132 (629)
T ss_dssp HHTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTTGGGG-GGTTSTTSCCSSCCGGGCTTCCSCCSSSSC--HHHHH
T ss_pred hhHHHHHHHHHhhcCCCCCeEEecCchHHHHHHHHhCcHhHH-hCcccCCCCCCCCCCCCCCCCCcCCCcccc--cHhHH
Confidence 344566666655555 67888888776332223333321111 22233321000010 11123567799999 99999
Q ss_pred Hhhhhc----c-CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCC-C-CCC---cccccc
Q 041113 333 IGFAVG----C-NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIA-D-RTE---PRILDQ 400 (983)
Q Consensus 333 iGaalA----~-~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~-~-~~~---~~~~~~ 400 (983)
+|+|+| . +++|||++|||+|+ |..++|.|+++ +++|+ ++|+|||+|+|....... . .+. ...+..
T Consensus 133 vG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~--~~~pl-i~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~ 209 (629)
T 2o1x_A 133 LGMALARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGD--MGRKM-LIVLNDNEMSISENVGAMNKFMRGLQVQKWFQE 209 (629)
T ss_dssp HHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHH--HCCSE-EEEEEECSBSSSBCCSSHHHHC-----------
T ss_pred HHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHh--hCCCE-EEEEECCCCCCCCChhHHHHHHHHHhhchhHHH
Confidence 999999 3 78999999999999 88899999999 89997 555788899987543100 0 000 000000
Q ss_pred c----------cccC------CCCCHH---------HHHHHcCCcee-eeC--CHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 401 Y----------FYTT------HNISIQ---------NLCLAHGLNHV-QVK--TKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 401 ~----------~~~~------~~~df~---------~la~a~G~~~~-~v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
. ++.+ ...||. +++++||+++. +|+ +.++|.++|+++.+.++|+||||.|.+
T Consensus 210 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~~~P~lI~v~t~k 289 (629)
T 2o1x_A 210 GEGAGKKAVEAVSKPLADFMSRAKNSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDLDGPTILHIVTTK 289 (629)
T ss_dssp ----------------------------------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTTSSSEEEEEEECCT
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHhcCCCEEEEEEEec
Confidence 0 0000 011543 89999999998 886 999999999999888999999999987
Q ss_pred cc
Q 041113 453 DA 454 (983)
Q Consensus 453 ~~ 454 (983)
..
T Consensus 290 g~ 291 (629)
T 2o1x_A 290 GK 291 (629)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 152
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.46 E-value=1.1e-13 Score=164.36 Aligned_cols=117 Identities=16% Similarity=0.253 Sum_probs=103.0
Q ss_pred eecCCCCCccchHHHHHhhhhcc------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCCCc
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHGGA 382 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g 382 (983)
....|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.++.+ +++|.+|+|+|||+|+
T Consensus 110 ~~~tG~lG~--gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~--~~L~~livi~nnN~~~ 185 (632)
T 3l84_A 110 EIATGPLGQ--GVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGL--HKLDNFILIYDSNNIS 185 (632)
T ss_dssp CSCCCSTTH--HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEECSEE
T ss_pred ccCCcchhh--HHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHH--cCCCcEEEEEECCCcc
Confidence 345599999 999999999985 57899999999999 89999999999 9999999999999998
Q ss_pred cccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 383 IFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
|.... ... ...|+.+++++||+++.+|+ +.++|.++|+++.+.++|+||+|.|.+
T Consensus 186 i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A~~~~~P~lI~v~T~k 242 (632)
T 3l84_A 186 IEGDV-----------GLA----FNENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKTTI 242 (632)
T ss_dssp TTEEG-----------GGT----CCCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHHHTCSSCEEEEEECCT
T ss_pred cccch-----------hhh----cChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHHHhCCCCEEEEEeeEe
Confidence 87432 111 25799999999999999997 899999999999888999999999975
No 153
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.44 E-value=1.7e-13 Score=164.28 Aligned_cols=118 Identities=17% Similarity=0.239 Sum_probs=100.3
Q ss_pred ecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHG 380 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g 380 (983)
...|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.++.+ +++|.+|+|+|||+
T Consensus 152 ~~tG~lG~--gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~--~~L~~livI~dnN~ 227 (711)
T 3uk1_A 152 TTTGPLGQ--GLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGT--LKLNKLIALYDDNG 227 (711)
T ss_dssp SCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEECS
T ss_pred cCccchhh--HHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHH--hCCCcEEEEEECCC
Confidence 45699999 999999999985 46899999999999 78899999999 99999999999999
Q ss_pred CccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceee-eC--CHHHHHHHHHhhhccCCCEEEEEEcCccc
Q 041113 381 GAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQ-VK--TKVELEEALSMSQHLGTDRVIEVESCIDA 454 (983)
Q Consensus 381 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~-v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~~~ 454 (983)
|+|.... ... ...||.+++++||+++.+ |+ +.++|.++|+++.+.++|+||+|.|.+..
T Consensus 228 ~~i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~A~~~~~P~lI~v~T~kG~ 289 (711)
T 3uk1_A 228 ISIDGDV-----------VNW----FHDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKRSDKPSLICCKTRIGN 289 (711)
T ss_dssp EETTEEG-----------GGT----CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHTTCSSCEEEEEEC----
T ss_pred cccccch-----------hhh----cCCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEEcccccc
Confidence 9886432 111 257999999999999998 74 89999999999988899999999998643
No 154
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.43 E-value=2.1e-13 Score=162.97 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=98.4
Q ss_pred ecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHG 380 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g 380 (983)
...|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.++.+ +++|.+|+|+|||+
T Consensus 113 ~~tG~lG~--gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~--~~L~~livi~dnN~ 188 (663)
T 3kom_A 113 TTTGPLGQ--GVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGT--LGLNKLVAFWDDNN 188 (663)
T ss_dssp SCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHH--HTCTTEEEEEEECC
T ss_pred cCCcchhh--HHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHH--hCCCeEEEEEECCC
Confidence 45699999 999999999985 37899999999998 78899999999 99999999999999
Q ss_pred CccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-eeC--CHHHHHHHHHhhhc-cCCCEEEEEEcCcc
Q 041113 381 GAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QVK--TKVELEEALSMSQH-LGTDRVIEVESCID 453 (983)
Q Consensus 381 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~--~~~eL~~aL~~a~~-~~~p~lIeV~~~~~ 453 (983)
|+|.... +.. ...||.+++++||+++. +|+ +.++|.++|+++.+ .++|+||+|.|.+.
T Consensus 189 ~~i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~A~~~~~~P~lI~~~T~kg 250 (663)
T 3kom_A 189 ISIDGDT-----------KGW----FSDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQQQKPTLICCKTVIG 250 (663)
T ss_dssp -----CG-----------GGT----CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHCSSSCEEEEEECCTT
T ss_pred cccccch-----------hhh----cchhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 9887432 111 25799999999999999 886 89999999999987 69999999999864
No 155
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.42 E-value=2.7e-13 Score=162.94 Aligned_cols=117 Identities=16% Similarity=0.144 Sum_probs=103.1
Q ss_pred eecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNH 379 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~ 379 (983)
....|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.|+.+ +++|.+|+|+|||
T Consensus 114 ~~~~G~lG~--gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~--~~L~~li~i~~nN 189 (651)
T 2e6k_A 114 EVTTGPLGQ--GISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGH--WGLSKLIVFWDDN 189 (651)
T ss_dssp CSCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEEC
T ss_pred eeccccccc--hHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHH--cCCCeEEEEEECC
Confidence 466799999 999999999983 57999999999999 78999999999 9999999999999
Q ss_pred CCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-eeC--CHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 380 GGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QVK--TKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 380 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
+|++.... ... ...|+.+++++||+++. +|+ +.++|.++|+++.+.++|+||+|.|.+
T Consensus 190 ~~~i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~~~~P~lI~~~t~k 250 (651)
T 2e6k_A 190 RISIDGPT-----------DLA----FTEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKLDERPTLIAVRSHI 250 (651)
T ss_dssp CEETTEEG-----------GGT----CCSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHHSSSCEEEEEECCT
T ss_pred Cccccccc-----------ccc----cCccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEEEeEe
Confidence 99987431 111 24699999999999999 888 999999999999888999999999986
No 156
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.42 E-value=3.2e-13 Score=161.58 Aligned_cols=117 Identities=16% Similarity=0.250 Sum_probs=102.3
Q ss_pred ecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHG 380 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g 380 (983)
...|+||+ |+|+|+|+|+|. +++|+|++|||+++ |+.++|.++.+ +++|.+|+|+|||+
T Consensus 137 ~~tG~lG~--gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~--~~L~~livI~dnN~ 212 (690)
T 3m49_A 137 ATTGPLGQ--GIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAH--LQLGRLVVLYDSND 212 (690)
T ss_dssp SCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEECS
T ss_pred cCCccccc--cHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHH--hCCCeEEEEEECCC
Confidence 35599999 999999999985 56899999999999 78899999999 99999999999999
Q ss_pred CccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeee---CCHHHHHHHHHhhhc-cCCCEEEEEEcCcc
Q 041113 381 GAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQV---KTKVELEEALSMSQH-LGTDRVIEVESCID 453 (983)
Q Consensus 381 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v---~~~~eL~~aL~~a~~-~~~p~lIeV~~~~~ 453 (983)
|+|.... .. ....|+.+++++||+++.+| ++.++|.++|+++.+ .++|+||+|.|.+.
T Consensus 213 ~~i~~~~-----------~~----~~~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a~~~~~~P~lI~v~T~kG 274 (690)
T 3m49_A 213 ISLDGDL-----------NR----SFSESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKADEKRPTLIEVRTTIG 274 (690)
T ss_dssp BCSSSBG-----------GG----TCCCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHHHHCCSSCEEEEEECCTT
T ss_pred eecccch-----------hh----ccchhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHHHhcCCCCEEEEEEeecc
Confidence 9887432 11 12478999999999999999 689999999999987 79999999998764
No 157
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.41 E-value=2.8e-13 Score=161.33 Aligned_cols=115 Identities=19% Similarity=0.172 Sum_probs=99.0
Q ss_pred ecCCCCCccchHHHHHhhhhcc------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCCCccccCCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPI 389 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~ 389 (983)
.+.|+||+ |+|+|+|+++|. +++|+|++|||+|+ |+.++|.++.+ +++|.++||+|||+|++.....
T Consensus 118 ~~~G~lG~--gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal~~A~~--~~l~~livi~nnN~~~i~~~~~- 192 (616)
T 3mos_A 118 VATGSLGQ--GLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASI--YKLDNLVAILDINRLGQSDPAP- 192 (616)
T ss_dssp SCCCSTTC--HHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHHHHHHH--TTCTTEEEEEEECSBCSSSBCT-
T ss_pred ccccccCC--ccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHHHHHHH--cCCCcEEEEEECCCCCCcCCcc-
Confidence 35699999 999999999984 47899999999999 89999999998 9999999999999998863210
Q ss_pred CCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 390 ADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
. .....||.+++++||+++.+|+ +.++|.++|+++ .++|+||||.|.+
T Consensus 193 ----------~---~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~--~~~P~lI~v~T~k 242 (616)
T 3mos_A 193 ----------L---QHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA--KHQPTAIIAKTFK 242 (616)
T ss_dssp ----------T---TTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC--CSSCEEEEEECCT
T ss_pred ----------c---ccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc--CCCCEEEEEEEec
Confidence 0 0124589999999999999995 899999999876 5899999999986
No 158
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.41 E-value=1.1e-12 Score=157.55 Aligned_cols=191 Identities=14% Similarity=0.145 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHhhcC-CCceEEEecCcchhhhhhhcCCCccc--ccccccccccCCCCCcceeEeecCCCCCccchHHHH
Q 041113 256 LTEPHVAHELSRALT-SNSALFVGNSMAIRDLDMYGRNWTTC--THTVADIMLNSEFPHQWIRVAGNRGASGIDGLLSTA 332 (983)
Q Consensus 256 ~~~~~~~~~l~~~l~-~~~iv~~d~g~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~G~mG~~g~lpaa 332 (983)
+....+...|...+. +++.++.|.|.....+.++......+ .++.++...- ..+...-....+.|+||+ ++|+|
T Consensus 54 lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l~G~~~~~~~~r~~~g~~g~-~~~~~s~~~~~~~G~~G~--gl~~A 130 (621)
T 2o1s_A 54 LGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPF-PWRGESEYDVLSVGHSST--SISAG 130 (621)
T ss_dssp HTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTTGGGGGGTTSTTSCCSS-CCTTTCTTCCSCCSSSSC--HHHHH
T ss_pred hhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHHhCCHhhhhcccccCCCCCC-CCCCCCCCCccCCcccch--HHHHH
Confidence 555666666766665 67788877665221122221110000 0111110000 000000011245799999 99999
Q ss_pred Hhhhhcc-----CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCC-----Ccccccc
Q 041113 333 IGFAVGC-----NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRT-----EPRILDQ 400 (983)
Q Consensus 333 iGaalA~-----~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~-----~~~~~~~ 400 (983)
+|+++|. +++|||++|||+|+ |+.++|.|+++ +++|++ +|+|||+|++.......... ....+..
T Consensus 131 ~G~AlA~~~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~--~~~pli-~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~ 207 (621)
T 2o1s_A 131 IGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGD--IRPDML-VILNDNEMSISENVGALNNHLAQLLSGKLYSS 207 (621)
T ss_dssp HHHHHHHHHHTSCCCEEEEEETTGGGSHHHHHHHHHHHH--HCCSEE-EEEEECC-------------------------
T ss_pred HHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHh--hCCCEE-EEEeCCCcccCCCcchHHHHHHhhhcchhHHH
Confidence 9999994 78999999999999 77889999999 899985 55688899987653210000 0000000
Q ss_pred -------cccc--------CCCCCH-------HHHHHHcCCcee-eeC--CHHHHHHHHHhhhccCCCEEEEEEcCc
Q 041113 401 -------YFYT--------THNISI-------QNLCLAHGLNHV-QVK--TKVELEEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 401 -------~~~~--------~~~~df-------~~la~a~G~~~~-~v~--~~~eL~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
.... ....|| ..++++||+++. +|+ +.++|.++|+++.+.++|+||||.|.+
T Consensus 208 ~~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~~gP~lI~v~t~k 284 (621)
T 2o1s_A 208 LREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKK 284 (621)
T ss_dssp -------------------------------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHSCSEEEEEEECCC
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHHcCCCEEEEEEEec
Confidence 0000 001244 689999999998 884 899999999999988999999999986
No 159
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.40 E-value=4.3e-13 Score=161.67 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=103.2
Q ss_pred eecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNH 379 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~ 379 (983)
....|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.++.+ ++++.+|+|+|||
T Consensus 123 ~~~~G~lG~--gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~--~~L~~li~i~~nN 198 (675)
T 1itz_A 123 EVTTGPLGQ--GIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGH--WGLGKLIAFYDDN 198 (675)
T ss_dssp CSCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEEC
T ss_pred eECCccHHh--HHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHH--hCCCcEEEEEECC
Confidence 456799999 999999999984 57899999999999 89999999999 9998889999999
Q ss_pred CCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-eeC---CHHHHHHHHHhhhc-cCCCEEEEEEcCcc
Q 041113 380 GGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QVK---TKVELEEALSMSQH-LGTDRVIEVESCID 453 (983)
Q Consensus 380 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~---~~~eL~~aL~~a~~-~~~p~lIeV~~~~~ 453 (983)
+|+|.... ... ...|+.+++++||+++. +|+ +.++|.++|+++.+ .++|+||+|.|.+.
T Consensus 199 ~~~i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~a~~~~~~P~lI~~~T~kg 262 (675)
T 1itz_A 199 HISIDGDT-----------EIA----FTEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKVTTTIG 262 (675)
T ss_dssp SEETTEEG-----------GGT----CCSCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEEECCTT
T ss_pred CccCCCCh-----------hhh----cChhHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHHCCCCeEEEEEeeecc
Confidence 99986421 111 25799999999999998 888 99999999999987 68999999999873
No 160
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.40 E-value=4.1e-13 Score=161.82 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=103.8
Q ss_pred EeecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeC
Q 041113 316 VAGNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINN 378 (983)
Q Consensus 316 ~~~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN 378 (983)
+..+.|+||+ |+|+|+|+|+|. +++|+|++|||+|+ |+.++|.++.+ +++|.+|+|+||
T Consensus 109 ~~~~~G~lG~--gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~--~~L~~li~i~~n 184 (669)
T 2r8o_A 109 VETTTGPLGQ--GIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGT--LKLGKLIAFYDD 184 (669)
T ss_dssp CCSCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEE
T ss_pred cccccccccc--hHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHH--cCCCcEEEEEEC
Confidence 3467799999 999999999984 56899999999999 78999999998 999999999999
Q ss_pred CCCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-eeC--CHHHHHHHHHhhhc-cCCCEEEEEEcCccc
Q 041113 379 HGGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QVK--TKVELEEALSMSQH-LGTDRVIEVESCIDA 454 (983)
Q Consensus 379 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~--~~~eL~~aL~~a~~-~~~p~lIeV~~~~~~ 454 (983)
|+|+|.... .. ....|+.+++++||+++. +|+ +.++|.++++++.+ .++|+||+|.|.+..
T Consensus 185 N~~~i~~~~-----------~~----~~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~~~~~P~lI~~~T~kg~ 249 (669)
T 2r8o_A 185 NGISIDGHV-----------EG----WFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGF 249 (669)
T ss_dssp CSEETTEEG-----------GG----TCCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHCCSSCEEEEEECCTTT
T ss_pred CCcEecccc-----------cc----ccCccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHhcCCCCEEEEEEeEecc
Confidence 999986421 10 124699999999999998 888 99999999999987 689999999998743
No 161
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.38 E-value=6.1e-13 Score=160.45 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=102.4
Q ss_pred eecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNH 379 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~ 379 (983)
....|+||+ |+|+|+|+++|. +++|+|++|||+|+ |+.++|.++.+ +++|.+|+|+|||
T Consensus 112 ~~~~G~lG~--gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~--~~L~~li~i~~nN 187 (680)
T 1gpu_A 112 EVTTGPLGQ--GISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGH--LKLGNLIAIYDDN 187 (680)
T ss_dssp CSCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--TTCTTEEEEEEEC
T ss_pred eeccccccc--hHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHH--hCCCcEEEEEECC
Confidence 456699999 999999999983 56899999999999 88999999998 9999889999999
Q ss_pred CCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-eeC---CHHHHHHHHHhhhc-cCCCEEEEEEcCc
Q 041113 380 GGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QVK---TKVELEEALSMSQH-LGTDRVIEVESCI 452 (983)
Q Consensus 380 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~---~~~eL~~aL~~a~~-~~~p~lIeV~~~~ 452 (983)
+|+|.... .. ....|+.+++++||+++. +|+ +.++|.++++++.+ .++|+||||.|.+
T Consensus 188 ~~~i~~~~-----------~~----~~~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~~~~~P~lI~~~T~k 250 (680)
T 1gpu_A 188 KITIDGAT-----------SI----SFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIKMTTTI 250 (680)
T ss_dssp SEETTEEG-----------GG----TCCCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHHCTTSCEEEEEECCT
T ss_pred CceEeccc-----------cc----ccCccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHCCCCCEEEEEEeec
Confidence 99986431 11 124799999999999999 998 99999999999987 6899999999987
No 162
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.29 E-value=5e-12 Score=152.10 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=100.6
Q ss_pred eecCCCCCccchHHHHHhhhhcc---------------CceEEEEEccchhhh--ccchHHHHHhhccCCCEEEEEEeCC
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC---------------NKHVLCVVGDISFLH--DTNGLAILKQRMKRKPILMLVINNH 379 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~---------------~~~vv~i~GDGsf~~--~~~eL~Ta~~~~~~lpv~iiV~NN~ 379 (983)
....|+||+ |+|.|+|+|+|. +++|+|++|||++++ ...++.++.+ +++|.+|+|+|||
T Consensus 112 ~~~tG~lG~--gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~--~~L~~li~i~d~N 187 (673)
T 1r9j_A 112 EVTTGPLGQ--GIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGH--LALEKLIVIYDSN 187 (673)
T ss_dssp CSCCCSTTH--HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHH--HTCTTEEEEEEEC
T ss_pred eeccCCCCC--cHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHH--hCCCcEEEEEECC
Confidence 356699999 999999999983 578999999999995 5788999998 9999899999999
Q ss_pred CCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCcee-ee---CCHHHHHHHHHhhhc-cCCCEEEEEEcCc
Q 041113 380 GGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHV-QV---KTKVELEEALSMSQH-LGTDRVIEVESCI 452 (983)
Q Consensus 380 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~-~v---~~~~eL~~aL~~a~~-~~~p~lIeV~~~~ 452 (983)
+|++.... ... ...|+.+.+++||+++. +| ++.++|.++++++.+ .++|+||++.|.+
T Consensus 188 ~~~i~~~~-----------~~~----~~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~~~~~P~lI~~~T~k 250 (673)
T 1r9j_A 188 YISIDGST-----------SLS----FTEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKATKGKPKMIVQTTTI 250 (673)
T ss_dssp SBCSSSBG-----------GGT----CCCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEEECCT
T ss_pred CCccccch-----------hhc----cCHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCCEEEEEeccc
Confidence 99886421 111 14689999999999999 88 789999999999986 7899999999976
No 163
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=98.98 E-value=1e-09 Score=131.30 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=97.2
Q ss_pred ecCCCCCccchHHHHHhhhhcc------------------CceEEEEEccchhhh--ccchHHHHHhhccCCCEEEEEEe
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC------------------NKHVLCVVGDISFLH--DTNGLAILKQRMKRKPILMLVIN 377 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~------------------~~~vv~i~GDGsf~~--~~~eL~Ta~~~~~~lpv~iiV~N 377 (983)
..-|.+|. |+|.|+|+|+|. +++|+|++|||+++. ....+.+|.. +++|-+|+|+|
T Consensus 130 ~~tG~lG~--gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~--~~L~nli~i~d 205 (700)
T 3rim_A 130 ITTGPLGQ--GLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAV--QQLGNLIVFYD 205 (700)
T ss_dssp SCCCSTTH--HHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHH--TTCTTEEEEEE
T ss_pred ccccccCC--cchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHH--cCCCcEEEEEE
Confidence 45589999 999999999973 478999999999995 4568899998 99987788999
Q ss_pred CCCCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeee---CCHHHHHHHHHhhhc-cCCCEEEEEEcCc
Q 041113 378 NHGGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQV---KTKVELEEALSMSQH-LGTDRVIEVESCI 452 (983)
Q Consensus 378 N~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v---~~~~eL~~aL~~a~~-~~~p~lIeV~~~~ 452 (983)
||+|++-... ... ...|+.+..++||+++.+| .+.++|.++++++.+ .++|+||++.|.+
T Consensus 206 ~N~~si~~~~-----------~~~----~~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~~~~~P~lI~~~T~k 269 (700)
T 3rim_A 206 RNQISIEDDT-----------NIA----LCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQAVTDRPSFIALRTVI 269 (700)
T ss_dssp ECSEETTEEG-----------GGT----CCCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHCCSSCEEEEEECCT
T ss_pred CCCcccccch-----------hhc----cchhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHHcCCCCEEEEEEEEe
Confidence 9999775321 111 2468999999999999999 489999999999987 6899999999975
No 164
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=98.97 E-value=1.1e-09 Score=133.54 Aligned_cols=118 Identities=13% Similarity=0.066 Sum_probs=95.0
Q ss_pred EeecCCCCCccchHHHHHhhhhcc-C--------------ceEEEEEccchh--hhccch-HHHHHhhccCCC---EEEE
Q 041113 316 VAGNRGASGIDGLLSTAIGFAVGC-N--------------KHVLCVVGDISF--LHDTNG-LAILKQRMKRKP---ILML 374 (983)
Q Consensus 316 ~~~~~G~mG~~g~lpaaiGaalA~-~--------------~~vv~i~GDGsf--~~~~~e-L~Ta~~~~~~lp---v~ii 374 (983)
...+-+.||. ++|.|+|+++|. . ..|+|+.|||+| ++.++| |.++.. +++| +++|
T Consensus 240 l~~n~s~Lg~--~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~--~~lp~g~vi~i 315 (868)
T 2yic_A 240 LTANPSHLEA--VDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALL--RGYRTGGTIHI 315 (868)
T ss_dssp ECCCCSSTTT--THHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTC--TTTCCSCCEEE
T ss_pred ecCCCccccc--cccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHh--cCCCCCCeEEE
Confidence 3455688999 999999999985 2 379999999998 689999 888887 8998 9888
Q ss_pred EEeCCCCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEE
Q 041113 375 VINNHGGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEV 448 (983)
Q Consensus 375 V~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV 448 (983)
|.|| +|++.... ... ....++.++|++||+++++|+ +++++..+++.|.+ .++|+|||+
T Consensus 316 v~NN-~~g~st~~---------~~~-----~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~ 380 (868)
T 2yic_A 316 VVNN-QIGFTTAP---------TDS-----RSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDM 380 (868)
T ss_dssp EEEC-SCBTTBCH---------HHH-----CSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEcC-CcccccCc---------ccc-----ccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 8888 88876320 000 023567789999999999998 69999999888764 589999999
Q ss_pred EcCc
Q 041113 449 ESCI 452 (983)
Q Consensus 449 ~~~~ 452 (983)
.+.+
T Consensus 381 ~tyR 384 (868)
T 2yic_A 381 LCYR 384 (868)
T ss_dssp ECCC
T ss_pred Eeec
Confidence 9976
No 165
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=98.84 E-value=6e-09 Score=130.59 Aligned_cols=117 Identities=13% Similarity=0.047 Sum_probs=93.0
Q ss_pred eecCCCCCccchHHHHHhhhhcc---C------------ceEEEEEccchh--hhccch-HHHHHhhccCCC---EEEEE
Q 041113 317 AGNRGASGIDGLLSTAIGFAVGC---N------------KHVLCVVGDISF--LHDTNG-LAILKQRMKRKP---ILMLV 375 (983)
Q Consensus 317 ~~~~G~mG~~g~lpaaiGaalA~---~------------~~vv~i~GDGsf--~~~~~e-L~Ta~~~~~~lp---v~iiV 375 (983)
..+-|.+|. ++|.|+|+++|. . ..++|+.|||+| +..++| |.++.. +++| +++||
T Consensus 486 ~~n~s~Lg~--~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~--~~lp~g~vi~iv 561 (1113)
T 2xt6_A 486 TANPSHLEA--VDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALL--RGYRTGGTIHIV 561 (1113)
T ss_dssp CCCCSSTTT--THHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTC--TTTCCSCCEEEE
T ss_pred cCCCccccc--cccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhh--cCCCCCCeEEEE
Confidence 455678999 999999999986 2 468999999998 788999 888776 8998 88888
Q ss_pred EeCCCCccccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--CHHHHHHHHHhhhc----cCCCEEEEEE
Q 041113 376 INNHGGAIFSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK--TKVELEEALSMSQH----LGTDRVIEVE 449 (983)
Q Consensus 376 ~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~--~~~eL~~aL~~a~~----~~~p~lIeV~ 449 (983)
.|| +|++.... ... ....++.+++++||+++++|+ +++++..+++.|.+ .++|+|||+.
T Consensus 562 ~NN-~~gist~~---------~~~-----~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~ 626 (1113)
T 2xt6_A 562 VNN-QIGFTTAP---------TDS-----RSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDML 626 (1113)
T ss_dssp EEC-SCBTTBCH---------HHH-----CSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EeC-CcccccCc---------ccc-----ccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 887 78775310 000 012456678999999999999 99999999888764 5899999999
Q ss_pred cCc
Q 041113 450 SCI 452 (983)
Q Consensus 450 ~~~ 452 (983)
+.+
T Consensus 627 tyR 629 (1113)
T 2xt6_A 627 CYR 629 (1113)
T ss_dssp CCC
T ss_pred eEc
Confidence 876
No 166
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=98.82 E-value=3.9e-09 Score=114.87 Aligned_cols=44 Identities=32% Similarity=0.496 Sum_probs=42.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|||||||||++++..|.++++.|+++|+||++|+||||+|+++
T Consensus 29 g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~ 72 (294)
T 1ehy_A 29 GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKP 72 (294)
T ss_dssp SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCC
T ss_pred CCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999875
No 167
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=98.82 E-value=4.7e-09 Score=113.24 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=42.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||||||++++.+|..+++.|+++||||++|+||||+|+++
T Consensus 27 ~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~ 70 (276)
T 2wj6_A 27 GPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSE 70 (276)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCC
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCC
Confidence 58999999999999999999999999999999999999999875
No 168
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=98.71 E-value=9.4e-09 Score=113.20 Aligned_cols=54 Identities=35% Similarity=0.541 Sum_probs=45.9
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|++. +|||||||||++++..|..+++.|+++|+||++|+||||+|+++
T Consensus 19 l~y~~~G~g~---~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~ 72 (316)
T 3afi_E 19 MAYRETGAQD---APVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKP 72 (316)
T ss_dssp EEEEEESCTT---SCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCC
T ss_pred EEEEEeCCCC---CCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCC
Confidence 3445566521 34999999999999999999999998999999999999999875
No 169
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=98.67 E-value=3.3e-08 Score=107.03 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=45.5
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChh-hHHHHHHHhhCCCEEEEEcCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGE-EWIPIMKAVSGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~-~w~~~~~~l~~~~~vi~~Dl~G~G~S~~ 980 (983)
+|...|+.. +|+|||+||+++++. .|..+++.|+++|+||++|+||||+|+.
T Consensus 16 ~~~~~G~~~---~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~ 68 (286)
T 2yys_A 16 YVEDVGPVE---GPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLE 68 (286)
T ss_dssp EEEEESCTT---SCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCC
T ss_pred EEEeecCCC---CCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCC
Confidence 345556433 789999999999999 8999999998889999999999999987
No 170
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=98.66 E-value=2e-08 Score=109.25 Aligned_cols=65 Identities=22% Similarity=0.324 Sum_probs=52.9
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+.+.+.+++..++| ...|+ +|||||+|||++++..|..+++.|+++|+||++|+||||.|+++.
T Consensus 5 ~~~~~~~~~~~~~~~----~~~g~-----g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~ 69 (291)
T 3qyj_A 5 FEQTIVDTTEARINL----VKAGH-----GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPA 69 (291)
T ss_dssp CEEEEEECSSCEEEE----EEECC-----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCC
T ss_pred cceeEEecCCeEEEE----EEcCC-----CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC
Confidence 455555555444333 55565 789999999999999999999999999999999999999998753
No 171
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=98.66 E-value=2.9e-08 Score=106.23 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=47.0
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
+|...|++. +|+|||+||++.++..|.++++.|+++|+||++|+||||+|+++.
T Consensus 18 ~y~~~G~~~---~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~ 71 (266)
T 3om8_A 18 AYRLDGAAE---KPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPP 71 (266)
T ss_dssp EEEEESCTT---SCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred EEEecCCCC---CCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCC
Confidence 345556533 789999999999999999999999999999999999999998753
No 172
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=98.66 E-value=8.6e-09 Score=113.25 Aligned_cols=44 Identities=27% Similarity=0.363 Sum_probs=41.6
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+|||||||||++++..|+.+++.|+++ ||||++|+||||+|+++
T Consensus 47 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~ 91 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKP 91 (310)
T ss_dssp SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEE
T ss_pred CCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCC
Confidence 579999999999999999999999987 99999999999999865
No 173
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=98.64 E-value=1.7e-08 Score=107.97 Aligned_cols=55 Identities=27% Similarity=0.541 Sum_probs=49.4
Q ss_pred eeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 922 CSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 922 ~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+++++|...|+ ++||||+||+++++..|..+++.|+++|+||++|+||||+|+.+
T Consensus 5 ~~~~~y~~~G~-----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~ 59 (269)
T 2xmz_A 5 HYKFYEANVET-----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSS 59 (269)
T ss_dssp SEEEECCSSCC-----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCC
T ss_pred cceEEEEEcCC-----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCC
Confidence 45667777776 67999999999999999999999998999999999999999876
No 174
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=98.62 E-value=1.7e-08 Score=110.12 Aligned_cols=44 Identities=23% Similarity=0.331 Sum_probs=41.4
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||||||++++..|+.+++.|+++ |+||++|+||||+|+++
T Consensus 46 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~ 90 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKP 90 (297)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEE
T ss_pred CCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCC
Confidence 589999999999999999999999886 99999999999999865
No 175
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=98.60 E-value=2.4e-08 Score=105.97 Aligned_cols=44 Identities=18% Similarity=0.406 Sum_probs=42.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|..+++.|+++|+||++|+||||+|+.+
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~ 59 (255)
T 3bf7_A 16 NSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPRE 59 (255)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCC
T ss_pred CCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCC
Confidence 78999999999999999999999998899999999999999865
No 176
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.58 E-value=1e-07 Score=104.73 Aligned_cols=44 Identities=30% Similarity=0.547 Sum_probs=41.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|..+++.|++ +|+||++|+||||.|+.+
T Consensus 38 ~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~ 83 (316)
T 3c5v_A 38 GPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVK 83 (316)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS
T ss_pred CcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC
Confidence 68999999999999999999999998 899999999999999764
No 177
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=98.58 E-value=3.4e-08 Score=105.76 Aligned_cols=44 Identities=18% Similarity=0.512 Sum_probs=42.1
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|.++++.|+++|+||++|+||||.|+.+
T Consensus 15 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~ 58 (268)
T 3v48_A 15 APVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDT 58 (268)
T ss_dssp CCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCC
T ss_pred CCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCC
Confidence 79999999999999999999999999999999999999999764
No 178
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=98.58 E-value=6.6e-08 Score=118.78 Aligned_cols=116 Identities=13% Similarity=0.072 Sum_probs=85.0
Q ss_pred ecCCCCCccchHHHHHhhhhcc-Cc---------eEEEEEccchh--hhccch-HHHHHhhccCCC---EEEEEEeCCCC
Q 041113 318 GNRGASGIDGLLSTAIGFAVGC-NK---------HVLCVVGDISF--LHDTNG-LAILKQRMKRKP---ILMLVINNHGG 381 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA~-~~---------~vv~i~GDGsf--~~~~~e-L~Ta~~~~~~lp---v~iiV~NN~g~ 381 (983)
.+-+.+|. ++|.|+|+++|. .+ .|||++|||+| +..+.| |.++.. +++| +++||.||+ |
T Consensus 318 ~~~shlg~--~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~--~~lp~gg~I~vv~nN~-~ 392 (933)
T 2jgd_A 318 FNPSHLEI--VSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKA--RGYEVGGTVRIVINNQ-V 392 (933)
T ss_dssp CCCSSTTC--HHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTS--TTTCCSCCEEEEEECC--
T ss_pred ccCccccc--ccCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhc--cCCCCCceEEEEEeCC-c
Confidence 45577888 999999999996 32 79999999998 778888 787776 8999 877777665 8
Q ss_pred cccc-CCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeCC--HHHHHHHHHhhh----ccCCCEEEEEEcCc
Q 041113 382 AIFS-LLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVKT--KVELEEALSMSQ----HLGTDRVIEVESCI 452 (983)
Q Consensus 382 g~~~-~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~~--~~eL~~aL~~a~----~~~~p~lIeV~~~~ 452 (983)
++.. .. .. .....++.+++++||+++++|+- ++++.+++++|. ..++|+|||+.+.+
T Consensus 393 ~ist~~~-----------~~---~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR 456 (933)
T 2jgd_A 393 GFTTSNP-----------LD---ARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYR 456 (933)
T ss_dssp ----------------------------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_pred cccCCCH-----------Hh---cccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeee
Confidence 7763 21 00 01234678889999999999974 888888888876 35899999999876
No 179
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=98.56 E-value=8.6e-08 Score=105.73 Aligned_cols=51 Identities=27% Similarity=0.484 Sum_probs=44.8
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+|...|+ +|+|||+|||++++..|..+++.|.+ +|+||++|+||||+|+.+
T Consensus 24 ~y~~~G~-----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~ 75 (328)
T 2cjp_A 24 HLAELGE-----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGA 75 (328)
T ss_dssp EEEEECS-----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCC
T ss_pred EEEEcCC-----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCc
Confidence 3455564 78999999999999999999999976 599999999999999875
No 180
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=98.56 E-value=6.4e-08 Score=105.23 Aligned_cols=52 Identities=19% Similarity=0.249 Sum_probs=44.1
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHH-HHhhCC-CEEEEEcCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIM-KAVSGS-ARCISIDLPGHGGSKM 980 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~-~~l~~~-~~vi~~Dl~G~G~S~~ 980 (983)
+|...|+.. +|+|||+||+++++..|..++ +.|+++ |+||++|+||||+|++
T Consensus 14 ~y~~~G~~~---~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~ 67 (298)
T 1q0r_A 14 WSDDFGDPA---DPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTT 67 (298)
T ss_dssp EEEEESCTT---SCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCC
T ss_pred EEEeccCCC---CCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCC
Confidence 345556433 789999999999999998754 999887 9999999999999986
No 181
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=98.56 E-value=7.3e-08 Score=103.36 Aligned_cols=54 Identities=24% Similarity=0.394 Sum_probs=45.9
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|+.. +|+|||+||+++++..|..+++.|+++ |+||++|+||||+|+.+
T Consensus 12 l~y~~~g~~~---~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~ 66 (276)
T 1zoi_A 12 IFYKDWGPRD---APVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQV 66 (276)
T ss_dssp EEEEEESCTT---SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred EEEEecCCCC---CCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 3445556433 789999999999999999999999876 99999999999999865
No 182
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=98.55 E-value=3.7e-08 Score=108.52 Aligned_cols=64 Identities=30% Similarity=0.415 Sum_probs=50.6
Q ss_pred EEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 911 RYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
.+.+.+++.. ++|...|++. +|+||||||+++++..|..+++.|+++|+||++|+||||+|+.+
T Consensus 23 ~~~~~~~g~~----l~y~~~G~g~---~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~ 86 (318)
T 2psd_A 23 CKQMNVLDSF----INYYDSEKHA---ENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKS 86 (318)
T ss_dssp CEEEEETTEE----EEEEECCSCT---TSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCC
T ss_pred ceEEeeCCeE----EEEEEcCCCC---CCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCC
Confidence 3445554433 3345556532 56999999999999999999999998999999999999999875
No 183
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=98.55 E-value=1.6e-07 Score=115.07 Aligned_cols=119 Identities=17% Similarity=0.098 Sum_probs=94.9
Q ss_pred ecCCCCCccchHHHHHhhhhc----------c--CceEEEEEccchhh--hccchHHHHHhhccCCCEEEEEEeCCCCcc
Q 041113 318 GNRGASGIDGLLSTAIGFAVG----------C--NKHVLCVVGDISFL--HDTNGLAILKQRMKRKPILMLVINNHGGAI 383 (983)
Q Consensus 318 ~~~G~mG~~g~lpaaiGaalA----------~--~~~vv~i~GDGsf~--~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~ 383 (983)
..-|.||. |+++|+|+|++ . +++|+|++|||++. ++...|..+.+ ++++-+|+|+|||++.+
T Consensus 189 ~~tG~~G~--g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~--~~L~nli~Vvn~N~~si 264 (886)
T 2qtc_A 189 FPTVSMGL--GPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATR--EKLDNLVFVINCNLQRL 264 (886)
T ss_dssp CCCCSTTH--HHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHH--TTCTTEEEEEEECSBCS
T ss_pred ccccccCc--cHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccccccchHHHHHHHHH--cCCCcEEEEEECCCccc
Confidence 44589999 99999999997 2 68999999999998 78999999998 89987788889998866
Q ss_pred ccCCCCCCCCCccccccccccCCCCCHHHHHHHcCCceeeeC--------------------------------------
Q 041113 384 FSLLPIADRTEPRILDQYFYTTHNISIQNLCLAHGLNHVQVK-------------------------------------- 425 (983)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~df~~la~a~G~~~~~v~-------------------------------------- 425 (983)
-... ..+ ....-++.++.+++|.+..+|.
T Consensus 265 ~~~v---------~~~----~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~ 331 (886)
T 2qtc_A 265 DGPV---------TGN----GKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGA 331 (886)
T ss_dssp SSBS---------CTT----SCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHH
T ss_pred CCCc---------ccc----ccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccch
Confidence 4211 000 0012368889999999998883
Q ss_pred ---------------------------------CHHHHHHHHHhhhcc-CCCEEEEEEcCcc
Q 041113 426 ---------------------------------TKVELEEALSMSQHL-GTDRVIEVESCID 453 (983)
Q Consensus 426 ---------------------------------~~~eL~~aL~~a~~~-~~p~lIeV~~~~~ 453 (983)
+.++|.++++++.+. ++|+||++.|-+.
T Consensus 332 ~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~A~~~~~~PtlI~~~T~KG 393 (886)
T 2qtc_A 332 YVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTIKG 393 (886)
T ss_dssp HHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHHHHHCCSSCEEEEEECCTT
T ss_pred HHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHHHHHcCCCCEEEEEeeeec
Confidence 688999999998764 6999999999763
No 184
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=98.54 E-value=9.4e-08 Score=102.11 Aligned_cols=44 Identities=23% Similarity=0.349 Sum_probs=41.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|.++++.|+++|+||++|+||||.|+.+
T Consensus 26 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~ 69 (266)
T 2xua_A 26 APWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAP 69 (266)
T ss_dssp CCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCC
T ss_pred CCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCC
Confidence 68999999999999999999999998899999999999999865
No 185
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=98.54 E-value=5.5e-08 Score=104.78 Aligned_cols=55 Identities=24% Similarity=0.350 Sum_probs=47.2
Q ss_pred eEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCCC
Q 041113 923 SFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 923 ~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+++|...|+ ++||||||||++++..|..+++.|.+ +|+||++|+||||+|+++.
T Consensus 17 ~~l~y~~~G~-----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 72 (281)
T 3fob_A 17 IEIYYEDHGT-----GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPW 72 (281)
T ss_dssp EEEEEEEESS-----SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCS
T ss_pred eEEEEEECCC-----CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc
Confidence 3455666776 78999999999999999999999965 5999999999999998763
No 186
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=98.53 E-value=7.1e-08 Score=104.33 Aligned_cols=54 Identities=26% Similarity=0.293 Sum_probs=46.2
Q ss_pred EEEEeecCCccCCCCceEEEeCCCC---CChhhHHHHH-HHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 924 FIKVQEIGQRIDIQDNILLFLHGFL---GTGEEWIPIM-KAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 924 ~~~~~~~g~~~~~~~~~lv~lHG~~---~~~~~w~~~~-~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
+++|...|+ +|+|||+||++ ++...|..++ +.|+++|+||++|+||||+|+.+.
T Consensus 24 ~l~y~~~G~-----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~ 81 (286)
T 2puj_A 24 NIHYNEAGN-----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV 81 (286)
T ss_dssp EEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred EEEEEecCC-----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCC
Confidence 344456665 68999999998 7888999999 999988999999999999998763
No 187
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=98.53 E-value=6.2e-08 Score=104.63 Aligned_cols=52 Identities=21% Similarity=0.359 Sum_probs=43.2
Q ss_pred EEeecCCccCCCCceEEEeCCCCCCh---hhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTG---EEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~---~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
+|...|+ +|+|||+|||+.++ ..|..+++.|+++|+||++|+||||+|+.+.
T Consensus 18 ~y~~~G~-----g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~ 72 (282)
T 1iup_A 18 NYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE 72 (282)
T ss_dssp EEEEECC-----SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCT
T ss_pred EEEecCC-----CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCC
Confidence 3455565 68999999998654 4888999999889999999999999998753
No 188
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=98.53 E-value=1.1e-07 Score=101.59 Aligned_cols=52 Identities=31% Similarity=0.482 Sum_probs=45.6
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|+ ++||||+|||++++..|..+++.|.+ +|+||++|+||||+|+.+
T Consensus 11 l~y~~~G~-----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 63 (271)
T 3ia2_A 11 IYFKDWGS-----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63 (271)
T ss_dssp EEEEEESS-----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCC
T ss_pred EEEEccCC-----CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCC
Confidence 34566675 68999999999999999999999976 599999999999999865
No 189
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=98.52 E-value=1.5e-07 Score=101.28 Aligned_cols=44 Identities=18% Similarity=0.369 Sum_probs=41.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|..+++.|+++|+||++|+||||+|+.+
T Consensus 29 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~ 72 (285)
T 3bwx_A 29 RPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYA 72 (285)
T ss_dssp SCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCC
T ss_pred CCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCC
Confidence 68999999999999999999999999999999999999999864
No 190
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=98.52 E-value=1e-07 Score=102.33 Aligned_cols=53 Identities=25% Similarity=0.406 Sum_probs=45.9
Q ss_pred EEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 924 FIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 924 ~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+++|...|+ ++||||+||+++++..|..+++.|+++ |+||++|+||||+|+.+
T Consensus 14 ~l~y~~~g~-----g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~ 67 (277)
T 1brt_A 14 DLYYEDHGT-----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQP 67 (277)
T ss_dssp EEEEEEECS-----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred EEEEEEcCC-----CCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCC
Confidence 344455564 678999999999999999999999875 99999999999999875
No 191
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=98.50 E-value=1.2e-07 Score=101.35 Aligned_cols=54 Identities=28% Similarity=0.383 Sum_probs=45.8
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|+.. +|+|||+||+++++..|..+++.|+++ |+||++|+||||+|+.+
T Consensus 11 l~y~~~g~~~---~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 65 (275)
T 1a88_A 11 IFYKDWGPRD---GLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP 65 (275)
T ss_dssp EEEEEESCTT---SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred EEEEEcCCCC---CceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCC
Confidence 3445556433 789999999999999999999999876 99999999999999865
No 192
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=98.50 E-value=1.2e-07 Score=101.35 Aligned_cols=52 Identities=27% Similarity=0.456 Sum_probs=45.3
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|+ +|+|||+||+++++..|..+++.|+++ |+||++|+||||+|+.+
T Consensus 11 l~y~~~g~-----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~ 63 (273)
T 1a8s_A 11 IYYKDWGS-----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQP 63 (273)
T ss_dssp EEEEEESC-----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred EEEEEcCC-----CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCC
Confidence 34455564 689999999999999999999999876 99999999999999865
No 193
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=98.47 E-value=1.6e-07 Score=100.45 Aligned_cols=52 Identities=35% Similarity=0.544 Sum_probs=45.1
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
++|...|+ +|+|||+||+++++..|..+++.|.+. |+||++|+||||+|+.+
T Consensus 11 l~y~~~g~-----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 63 (274)
T 1a8q_A 11 IFYKDWGQ-----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPV 63 (274)
T ss_dssp EEEEEECS-----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred EEEEecCC-----CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC
Confidence 34455564 689999999999999999999999876 99999999999999865
No 194
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=98.45 E-value=9.8e-08 Score=103.57 Aligned_cols=53 Identities=21% Similarity=0.319 Sum_probs=44.3
Q ss_pred EeecCCccCCCCceEEEeCCCC---CChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 927 VQEIGQRIDIQDNILLFLHGFL---GTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 927 ~~~~g~~~~~~~~~lv~lHG~~---~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
|...|++. +|+|||+||++ .++..|..+++.|+++|+||++|+||||.|+.+.
T Consensus 28 y~~~G~g~---~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~ 83 (291)
T 2wue_A 28 YHEAGVGN---DQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRA 83 (291)
T ss_dssp EEEECTTC---SSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCS
T ss_pred EEecCCCC---CCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCC
Confidence 34555421 35999999998 8888999999999988999999999999998763
No 195
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=98.45 E-value=1.7e-07 Score=100.49 Aligned_cols=53 Identities=23% Similarity=0.435 Sum_probs=45.8
Q ss_pred EEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 924 FIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 924 ~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+++|...|+ ++||||+||+++++..|.++++.|+++ |+||++|+||||.|+.+
T Consensus 14 ~l~y~~~g~-----~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~ 67 (279)
T 1hkh_A 14 ELYYEDQGS-----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKV 67 (279)
T ss_dssp EEEEEEESS-----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCC
T ss_pred EEEEEecCC-----CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCC
Confidence 344555564 678999999999999999999999875 99999999999999865
No 196
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=98.42 E-value=1.6e-07 Score=99.43 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=45.6
Q ss_pred eecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 928 QEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 928 ~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
...|+.. +|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.+
T Consensus 14 ~~~g~~~---~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~ 64 (264)
T 3ibt_A 14 SESGDPH---APTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTD 64 (264)
T ss_dssp EEESCSS---SCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCC
T ss_pred EEeCCCC---CCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCC
Confidence 4555533 78999999999999999999999998999999999999999875
No 197
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=98.42 E-value=1.8e-07 Score=100.76 Aligned_cols=45 Identities=24% Similarity=0.458 Sum_probs=40.3
Q ss_pred Cce-EEEeCCCC---CChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 938 DNI-LLFLHGFL---GTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 938 ~~~-lv~lHG~~---~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
++| |||+||++ +++..|..+++.|+++|+||++|+||||+|+.+.
T Consensus 28 g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~ 76 (285)
T 1c4x_A 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPE 76 (285)
T ss_dssp TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCS
T ss_pred CCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCC
Confidence 455 99999998 7888999999999988999999999999998653
No 198
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=98.39 E-value=2.3e-07 Score=98.96 Aligned_cols=44 Identities=30% Similarity=0.864 Sum_probs=40.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhh-CCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVS-GSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~-~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|.++++.|+ ++|+||++|+||||.|+.+
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~ 60 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPER 60 (264)
T ss_dssp BCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC--
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCC
Confidence 3899999999999999999999998 7899999999999999864
No 199
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=98.38 E-value=2.9e-07 Score=99.40 Aligned_cols=64 Identities=27% Similarity=0.373 Sum_probs=52.1
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
++.+.+.+++..++| ...|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.+
T Consensus 10 ~~~~~~~~~g~~l~~----~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~ 73 (301)
T 3kda_A 10 FESAYREVDGVKLHY----VKGGQ-----GPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPP 73 (301)
T ss_dssp CEEEEEEETTEEEEE----EEEES-----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCC
T ss_pred cceEEEeeCCeEEEE----EEcCC-----CCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCC
Confidence 455555565544333 44554 78999999999999999999999998899999999999999865
No 200
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=98.37 E-value=4.1e-07 Score=98.21 Aligned_cols=67 Identities=25% Similarity=0.281 Sum_probs=50.1
Q ss_pred EEEEEEcccCceeEEEEeecCCccCCCCc-eEEEeCCCC---CChhhHHHHH-HHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 911 RYQLNVNSKDFCSFIKVQEIGQRIDIQDN-ILLFLHGFL---GTGEEWIPIM-KAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~lv~lHG~~---~~~~~w~~~~-~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+.++++..+...+++|...|+ ++ +|||+||++ .++..|..++ +.|+++|+||++|+||||.|+.+.
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~-----g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 84 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ-----GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVV 84 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC-----CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEEcCCCcEEEEEEeccCC-----CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCC
Confidence 4455555223112344455665 45 999999998 7778899998 999988999999999999998753
No 201
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=98.37 E-value=3.3e-07 Score=99.60 Aligned_cols=61 Identities=18% Similarity=0.355 Sum_probs=48.5
Q ss_pred eEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCC---CChhhHHHHHHHhhCCCEEEEEcCCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFL---GTGEEWIPIMKAVSGSARCISIDLPGHGGSK 979 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~---~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~ 979 (983)
..+.+.+++. +++|...|+ +|+|||+||++ .+...|..+++.|+++|+||++|+||||+|+
T Consensus 17 ~~~~~~~~g~----~l~y~~~g~-----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~ 80 (296)
T 1j1i_A 17 VERFVNAGGV----ETRYLEAGK-----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTA 80 (296)
T ss_dssp EEEEEEETTE----EEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSC
T ss_pred cceEEEECCE----EEEEEecCC-----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCC
Confidence 3444555433 334455665 68999999998 7888999999999988999999999999998
No 202
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=98.37 E-value=3.3e-07 Score=98.95 Aligned_cols=65 Identities=29% Similarity=0.383 Sum_probs=53.0
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+.+.+.+++..++| ...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.|+.+.
T Consensus 13 ~~~~~~~~~g~~l~~----~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~ 77 (306)
T 3r40_A 13 FGSEWINTSSGRIFA----RVGGD-----GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPE 77 (306)
T ss_dssp CEEEEECCTTCCEEE----EEEEC-----SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCC
T ss_pred CceEEEEeCCEEEEE----EEcCC-----CCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCC
Confidence 555666555554444 44454 789999999999999999999999999999999999999998764
No 203
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=98.36 E-value=4.1e-07 Score=96.05 Aligned_cols=64 Identities=25% Similarity=0.415 Sum_probs=48.6
Q ss_pred eEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCC-hhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGT-GEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~-~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+...+.+++..++| ...|++ .++|||+||++++ ...|..+++.|.++ |+|+++|+||||.|+.+
T Consensus 3 ~~~~~~~~g~~l~~----~~~g~~----~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 68 (254)
T 2ocg_A 3 TSAKVAVNGVQLHY----QQTGEG----DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP 68 (254)
T ss_dssp EEEEEEETTEEEEE----EEEECC----SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSS
T ss_pred ceeEEEECCEEEEE----EEecCC----CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCC
Confidence 44555554433333 444542 3689999999999 77899999999887 99999999999999764
No 204
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=98.33 E-value=2.8e-07 Score=101.99 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=48.6
Q ss_pred eEEEEEEcccCceeEEEEeecCCccC-CCCceEEEeCCCCCChhhHHHHHHHhh--CCCEEEEEcCCCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRID-IQDNILLFLHGFLGTGEEWIPIMKAVS--GSARCISIDLPGHGGSKM 980 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~lv~lHG~~~~~~~w~~~~~~l~--~~~~vi~~Dl~G~G~S~~ 980 (983)
+...+.+++..++| ...|+... ..++|||||||+++++..|..++..|. .+|+||++|+||||+|++
T Consensus 29 ~~~~v~~~g~~l~y----~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~ 98 (330)
T 3nwo_A 29 SSRTVPFGDHETWV----QVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTH 98 (330)
T ss_dssp CEEEEEETTEEEEE----EEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCC
T ss_pred cceeEeecCcEEEE----EEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCC
Confidence 44555555443333 44443110 013489999999999999999999887 479999999999999986
No 205
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=98.31 E-value=2e-07 Score=99.72 Aligned_cols=44 Identities=25% Similarity=0.436 Sum_probs=41.4
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|..+++.|+++|+||++|+||||.|+.+
T Consensus 20 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~ 63 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLR 63 (271)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCT
T ss_pred CCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCC
Confidence 47999999999999999999999998999999999999999864
No 206
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=98.30 E-value=2.6e-07 Score=98.13 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=52.6
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
.+++.+.+.+..++ |...|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.+
T Consensus 3 ~~~~~~~~~~~~~~----y~~~g~-----~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~ 66 (278)
T 3oos_A 3 WTTNIIKTPRGKFE----YFLKGE-----GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSA 66 (278)
T ss_dssp CEEEEEEETTEEEE----EEEECS-----SSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCC
T ss_pred cccCcEecCCceEE----EEecCC-----CCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCC
Confidence 34556666554333 355665 78999999999999999999999999999999999999999875
No 207
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=98.30 E-value=9.1e-07 Score=100.18 Aligned_cols=69 Identities=16% Similarity=0.236 Sum_probs=52.0
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC----------CCEEEEEcCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG----------SARCISIDLPGHGGS 978 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~----------~~~vi~~Dl~G~G~S 978 (983)
.....+.+++..++| .....+.+. ++||||+|||+++...|..+++.|.+ .|+||++|+||||.|
T Consensus 68 ~~~~~~~i~g~~i~~--~~~~~~~~~---~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S 142 (388)
T 4i19_A 68 YPQFTTEIDGATIHF--LHVRSPEPD---ATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLS 142 (388)
T ss_dssp SCEEEEEETTEEEEE--EEECCSSTT---CEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGG
T ss_pred CCcEEEEECCeEEEE--EEccCCCCC---CCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCC
Confidence 344445555444443 222222222 78999999999999999999999998 899999999999999
Q ss_pred CCCC
Q 041113 979 KMQN 982 (983)
Q Consensus 979 ~~~~ 982 (983)
+.+.
T Consensus 143 ~~~~ 146 (388)
T 4i19_A 143 GPLK 146 (388)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 8764
No 208
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=98.29 E-value=5.6e-07 Score=96.84 Aligned_cols=67 Identities=30% Similarity=0.424 Sum_probs=53.3
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+...+.+++..+ ++...|++. +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+.
T Consensus 10 ~~~~~~~~~g~~l----~~~~~g~~~---~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~ 76 (299)
T 3g9x_A 10 FDPHYVEVLGERM----HYVDVGPRD---GTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD 76 (299)
T ss_dssp CCCEEEEETTEEE----EEEEESCSS---SCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCC
T ss_pred cceeeeeeCCeEE----EEEecCCCC---CCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCC
Confidence 4455555654433 335556544 789999999999999999999999989999999999999998764
No 209
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=98.28 E-value=1.2e-06 Score=93.10 Aligned_cols=67 Identities=24% Similarity=0.429 Sum_probs=53.3
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~~ 982 (983)
++...+.+++..++| ...|++. +|+|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+.
T Consensus 4 ~~~~~~~~~g~~l~~----~~~g~~~---~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 71 (286)
T 3qit_A 4 MEEKFLEFGGNQICL----CSWGSPE---HPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE 71 (286)
T ss_dssp CEEEEEEETTEEEEE----EEESCTT---SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred hhhheeecCCceEEE----eecCCCC---CCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCC
Confidence 456666665544433 4445433 789999999999999999999999887 999999999999998754
No 210
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=98.27 E-value=6.9e-07 Score=94.49 Aligned_cols=60 Identities=23% Similarity=0.351 Sum_probs=49.4
Q ss_pred EEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCCC
Q 041113 914 LNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 914 ~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~~ 982 (983)
+++++..++| ...|+ +|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+.
T Consensus 6 ~~~~g~~l~y----~~~g~-----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~ 67 (272)
T 3fsg_A 6 EYLTRSNISY----FSIGS-----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPIS 67 (272)
T ss_dssp CEECTTCCEE----EEECC-----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCS
T ss_pred EEecCCeEEE----EEcCC-----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCC
Confidence 3445554444 44554 78999999999999999999999987 7999999999999998764
No 211
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.27 E-value=1.1e-06 Score=99.98 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=41.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-------CCEEEEEcCCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-------SARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-------~~~vi~~Dl~G~G~S~~~~ 982 (983)
++||||+|||+++...|..+++.|++ .|+||++|+||||.|+.+.
T Consensus 109 ~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~ 160 (408)
T 3g02_A 109 AVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP 160 (408)
T ss_dssp CEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCC
Confidence 78999999999999999999999986 3799999999999998763
No 212
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=98.26 E-value=1e-06 Score=92.71 Aligned_cols=51 Identities=20% Similarity=0.262 Sum_probs=45.2
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+
T Consensus 16 ~~~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~ 66 (262)
T 3r0v_A 16 AFERSGS-----GPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDT 66 (262)
T ss_dssp EEEEEEC-----SSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCC
T ss_pred EEEEcCC-----CCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCC
Confidence 3445554 68999999999999999999999998899999999999999865
No 213
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=98.23 E-value=7.3e-07 Score=95.82 Aligned_cols=62 Identities=26% Similarity=0.414 Sum_probs=50.2
Q ss_pred EEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 911 RYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
.+.+++++.. ++|...|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.+
T Consensus 10 ~~~~~~~g~~----l~~~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~ 71 (297)
T 2qvb_A 10 PKYLEIAGKR----MAYIDEGK-----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKL 71 (297)
T ss_dssp CEEEEETTEE----EEEEEESS-----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCC
T ss_pred ceEEEECCEE----EEEEecCC-----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCC
Confidence 3444454433 33455565 68999999999999999999999998899999999999999865
No 214
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=98.22 E-value=9.4e-07 Score=95.44 Aligned_cols=65 Identities=25% Similarity=0.386 Sum_probs=51.9
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHH-hhCCCEEEEEcCCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKA-VSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~-l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+...+.+++..++ |...|+ +|+|||+||++++...|..+++. +.++|+|+++|+||||.|+.+.
T Consensus 9 ~~~~~~~~~g~~l~----~~~~g~-----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~ 74 (309)
T 3u1t_A 9 FAKRTVEVEGATIA----YVDEGS-----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPD 74 (309)
T ss_dssp CCCEEEEETTEEEE----EEEEEC-----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred ccceEEEECCeEEE----EEEcCC-----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCC
Confidence 44555666544333 355565 68999999999999999999998 7788999999999999998764
No 215
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=98.21 E-value=1.8e-06 Score=94.29 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=36.1
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCC-CCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGH-GGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~-G~S~~~ 981 (983)
+|+|||+|||++++..|..+++.|++ +|+||++|+||| |.|+.+
T Consensus 35 ~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~ 80 (305)
T 1tht_A 35 NNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS 80 (305)
T ss_dssp SCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC------
T ss_pred CCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCc
Confidence 68999999999999999999999986 599999999999 999753
No 216
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=98.21 E-value=1.9e-06 Score=90.87 Aligned_cols=44 Identities=20% Similarity=0.457 Sum_probs=40.1
Q ss_pred CceEEEeCCCCCC--hhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGT--GEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~--~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++ ...|..+++.|++ .|+|+++|+||||.|+.+
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 73 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGK 73 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCc
Confidence 6889999999999 8999999999976 599999999999999753
No 217
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=98.20 E-value=3.4e-06 Score=91.21 Aligned_cols=45 Identities=20% Similarity=0.332 Sum_probs=42.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~~ 982 (983)
+|+|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+.
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 91 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPA 91 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCC
Confidence 799999999999999999999999885 999999999999998653
No 218
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=98.19 E-value=9.9e-07 Score=95.17 Aligned_cols=66 Identities=15% Similarity=0.180 Sum_probs=43.5
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCC-ceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQD-NILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
++...+.+++..+ +|...|++. + ++|||+||+++++..|...+..+.+ +|+||++|+||||+|+.+
T Consensus 5 ~~~~~~~~~g~~l----~~~~~g~~~---~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 72 (293)
T 1mtz_A 5 CIENYAKVNGIYI----YYKLCKAPE---EKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEP 72 (293)
T ss_dssp CEEEEEEETTEEE----EEEEECCSS---CSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCC
T ss_pred hcceEEEECCEEE----EEEEECCCC---CCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCC
Confidence 3445555554333 334445422 3 7999999987666555444444444 599999999999999875
No 219
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=98.18 E-value=1.3e-06 Score=91.97 Aligned_cols=42 Identities=24% Similarity=0.432 Sum_probs=38.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+|||++++..|..+++.|++ +|+||++|+||||.|.
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~ 58 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPP 58 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCH
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCH
Confidence 57999999999999999999999975 5999999999999774
No 220
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=98.15 E-value=1.8e-06 Score=91.66 Aligned_cols=64 Identities=28% Similarity=0.424 Sum_probs=49.9
Q ss_pred eEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHH-hhCCCEEEEEcCCCCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKA-VSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~-l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+...+.+.+..++ |...+.. +|+|||+||+++++..|..+++. ++++|+|+++|+||||.|+.+
T Consensus 4 ~~~~~~~~~~~~~----~~~~~~~----~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 68 (279)
T 4g9e_A 4 NYHELETSHGRIA----VRESEGE----GAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDA 68 (279)
T ss_dssp EEEEEEETTEEEE----EEECCCC----EEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCC
T ss_pred EEEEEEcCCceEE----EEecCCC----CCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCC
Confidence 4455555554333 3444432 68999999999999999999998 677899999999999999874
No 221
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=98.14 E-value=1.4e-06 Score=93.94 Aligned_cols=51 Identities=31% Similarity=0.436 Sum_probs=45.5
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+
T Consensus 22 ~~~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~ 72 (302)
T 1mj5_A 22 AYIDEGT-----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKL 72 (302)
T ss_dssp EEEEESC-----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCC
T ss_pred EEEEcCC-----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCC
Confidence 3455565 68999999999999999999999998999999999999999865
No 222
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=98.14 E-value=5.6e-06 Score=88.82 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=42.9
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhh-HHH-----HHHHhhCCCEEEEEcCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEE-WIP-----IMKAVSGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~-w~~-----~~~~l~~~~~vi~~Dl~G~G~S~~ 980 (983)
+|...|++. .++|+|||+||++++... |.. +++.|+++|+|+++|+||||.|..
T Consensus 24 ~y~~~G~~~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~ 83 (286)
T 2qmq_A 24 TFTVYGTPK-PKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAP 83 (286)
T ss_dssp EEEEESCCC-TTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCC
T ss_pred EEEeccCCC-CCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCC
Confidence 345555421 127899999999999985 776 889999899999999999998764
No 223
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=98.12 E-value=1.7e-06 Score=93.25 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=39.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
++.|||+|||++++..|+.+++.|++. |+|+++|+||||.|+
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~ 93 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTP 93 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Confidence 567999999999999999999999875 999999999999985
No 224
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=97.39 E-value=3.7e-07 Score=98.37 Aligned_cols=64 Identities=25% Similarity=0.362 Sum_probs=51.4
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
++.+.+++++..++| ...|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.+
T Consensus 5 ~~~~~~~~~g~~~~~----~~~g~-----~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~ 68 (304)
T 3b12_A 5 FERRLVDVGDVTINC----VVGGS-----GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKP 68 (304)
Confidence 344555554444443 44554 78999999999999999999999998899999999999999875
No 225
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=98.04 E-value=3.7e-06 Score=90.41 Aligned_cols=43 Identities=26% Similarity=0.494 Sum_probs=38.8
Q ss_pred CceEEEeCCC--CCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGF--LGTGEEWIPIMKAVSGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~--~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~ 980 (983)
+|+|||+||| +++...|..+++.|+++|+|+++|+||||.|+.
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~ 85 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPV 85 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCC
Confidence 6899999955 666889999999999899999999999999983
No 226
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=98.03 E-value=8e-06 Score=86.54 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=51.0
Q ss_pred cccccceeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCC--hhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 903 TSMEEQVLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGT--GEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~--~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
....++++...+..++..++|. ........ +|+|||+||++++ ...|..+.+.|.+. |+|+++|+||||.|+
T Consensus 16 ~~~~~~~~~~~~~~~g~~l~~~--~~~p~~~~---~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 90 (270)
T 3pfb_A 16 NLYFQGMATITLERDGLQLVGT--REEPFGEI---YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90 (270)
T ss_dssp CCSCCEEEEEEEEETTEEEEEE--EEECSSSS---EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSS
T ss_pred ceeeccceEEEeccCCEEEEEE--EEcCCCCC---CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCC
Confidence 3334334455555444444443 23222222 6899999999988 67799999999765 999999999999998
Q ss_pred CC
Q 041113 980 MQ 981 (983)
Q Consensus 980 ~~ 981 (983)
.+
T Consensus 91 ~~ 92 (270)
T 3pfb_A 91 GK 92 (270)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 227
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=98.02 E-value=2.2e-06 Score=93.21 Aligned_cols=44 Identities=27% Similarity=0.404 Sum_probs=40.9
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCC-CCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGH-GGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~-G~S~~~ 981 (983)
+|+|||+||+++++..|..+++.|+++|+|+++|+||| |.|..+
T Consensus 67 ~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~ 111 (306)
T 2r11_A 67 APPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPE 111 (306)
T ss_dssp SCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEEC
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCC
Confidence 78999999999999999999999988999999999999 888653
No 228
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=98.02 E-value=6.9e-06 Score=89.44 Aligned_cols=63 Identities=25% Similarity=0.480 Sum_probs=49.7
Q ss_pred eEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
..+.+.+++..++ +...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+
T Consensus 49 ~~~~~~~~~~~~~----~~~~g~-----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~ 111 (314)
T 3kxp_A 49 ISRRVDIGRITLN----VREKGS-----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKP 111 (314)
T ss_dssp EEEEEECSSCEEE----EEEECC-----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCC
T ss_pred ceeeEEECCEEEE----EEecCC-----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCC
Confidence 4444444443333 344555 68999999999999999999999998999999999999999744
No 229
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=97.95 E-value=6.9e-06 Score=91.67 Aligned_cols=45 Identities=29% Similarity=0.508 Sum_probs=41.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~ 982 (983)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.
T Consensus 27 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~ 72 (356)
T 2e3j_A 27 GPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR 72 (356)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Confidence 78999999999999999999999976 5999999999999998653
No 230
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=97.95 E-value=1.3e-05 Score=85.73 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=40.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+
T Consensus 42 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 86 (303)
T 3pe6_A 42 KALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGE 86 (303)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSS
T ss_pred CeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCC
Confidence 67899999999999999999999987 599999999999999854
No 231
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=97.93 E-value=4e-06 Score=91.31 Aligned_cols=52 Identities=21% Similarity=0.260 Sum_probs=36.7
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhh-CCCEEEEEcCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVS-GSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~-~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|...|++. ++||||+||++++...| .+...+. ++|+||++|+||||+|+.+
T Consensus 25 ~y~~~G~~~---g~pvvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~ 77 (313)
T 1azw_A 25 YFEQCGNPH---GKPVVMLHGGPGGGCND-KMRRFHDPAKYRIVLFDQRGSGRSTPH 77 (313)
T ss_dssp EEEEEECTT---SEEEEEECSTTTTCCCG-GGGGGSCTTTEEEEEECCTTSTTSBST
T ss_pred EEEecCCCC---CCeEEEECCCCCccccH-HHHHhcCcCcceEEEECCCCCcCCCCC
Confidence 344455433 68999999998765332 2334443 5799999999999999864
No 232
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=97.93 E-value=9.3e-06 Score=87.08 Aligned_cols=55 Identities=24% Similarity=0.472 Sum_probs=45.7
Q ss_pred eEEEEeecCCccCCCCceEEEeCCCCCChhhHH-HHHHHh-hCCCEEEEEcCCCCCCCCCCC
Q 041113 923 SFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWI-PIMKAV-SGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 923 ~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~-~~~~~l-~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.+++|...|+ +|+|||+||++++...|. .++..| +++|+|+++|+||||.|+.+.
T Consensus 33 ~~l~y~~~g~-----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~ 89 (293)
T 3hss_A 33 INLAYDDNGT-----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE 89 (293)
T ss_dssp EEEEEEEECS-----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCC
T ss_pred ceEEEEEcCC-----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcc
Confidence 3455666675 789999999999999999 677776 667999999999999998653
No 233
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=97.92 E-value=1.3e-05 Score=94.65 Aligned_cols=53 Identities=23% Similarity=0.419 Sum_probs=46.0
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~~ 982 (983)
++|...|+ +|+|||+||+++++..|..+++.|.++ |+|+++|+||||.|+.+.
T Consensus 250 l~~~~~g~-----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~ 303 (555)
T 3i28_A 250 LHFVELGS-----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP 303 (555)
T ss_dssp EEEEEECS-----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred EEEEEcCC-----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 33455564 789999999999999999999999875 999999999999998753
No 234
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=97.90 E-value=4.2e-06 Score=93.43 Aligned_cols=57 Identities=21% Similarity=0.245 Sum_probs=43.4
Q ss_pred eEEEEeecCCccCCCCceEEEeCCCCCChhh-------------HHHHH---HHh-hCCCEEEEEcCCCCCCCC
Q 041113 923 SFIKVQEIGQRIDIQDNILLFLHGFLGTGEE-------------WIPIM---KAV-SGSARCISIDLPGHGGSK 979 (983)
Q Consensus 923 ~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~-------------w~~~~---~~l-~~~~~vi~~Dl~G~G~S~ 979 (983)
++++|...|+.....+|+|||+|||++++.. |+.++ ..| .++|+||++|+||||.|+
T Consensus 27 ~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~ 100 (377)
T 3i1i_A 27 VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVK 100 (377)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTT
T ss_pred eeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEeccccccccc
Confidence 4556666664322225899999999999888 99888 555 467999999999998754
No 235
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=97.89 E-value=4.6e-06 Score=87.84 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=40.9
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~ 980 (983)
+|+|||+||+++++..|..+++.|+++|+|+++|+||||.|+.
T Consensus 20 ~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~ 62 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNP 62 (269)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCG
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Confidence 5899999999999999999999998899999999999999965
No 236
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=97.89 E-value=4.6e-06 Score=88.44 Aligned_cols=44 Identities=23% Similarity=0.440 Sum_probs=41.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+
T Consensus 28 ~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~ 71 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLE 71 (282)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGG
T ss_pred CCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCC
Confidence 48999999999999999999999999999999999999999864
No 237
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=97.88 E-value=9.5e-06 Score=85.68 Aligned_cols=44 Identities=18% Similarity=0.374 Sum_probs=41.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+
T Consensus 20 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~ 63 (267)
T 3fla_A 20 RARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHE 63 (267)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTS
T ss_pred CceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCC
Confidence 78999999999999999999999998899999999999998754
No 238
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=97.86 E-value=1.1e-05 Score=93.40 Aligned_cols=54 Identities=24% Similarity=0.398 Sum_probs=46.6
Q ss_pred EEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHh-hCCCEEEEEcCCCCCCCCCCC
Q 041113 924 FIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAV-SGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 924 ~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l-~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
.++|...|+ +|+|||+||++++...|..+++.| ..+|+|+++|+||||.|+.+.
T Consensus 15 ~l~y~~~G~-----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~ 69 (456)
T 3vdx_A 15 DLYYEDHGT-----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT 69 (456)
T ss_dssp EEEEEEESS-----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS
T ss_pred EEEEEEeCC-----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC
Confidence 444566665 789999999999999999999999 567999999999999998653
No 239
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=97.84 E-value=7e-06 Score=85.08 Aligned_cols=43 Identities=37% Similarity=0.460 Sum_probs=40.2
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|. ++..|.++|+|+++|+||||.|+.+
T Consensus 16 ~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~ 58 (245)
T 3e0x_A 16 PNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQ 58 (245)
T ss_dssp SCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSC
T ss_pred CCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCC
Confidence 789999999999999999 8899988899999999999999843
No 240
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=97.84 E-value=7.1e-06 Score=87.96 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=41.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~ 94 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRE 94 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTS
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCC
Confidence 37899999999999999999999998999999999999998654
No 241
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=97.84 E-value=2.9e-05 Score=85.51 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=40.9
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+
T Consensus 60 ~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 104 (342)
T 3hju_A 60 KALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGE 104 (342)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSS
T ss_pred CcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCc
Confidence 67899999999999999999999988 599999999999999854
No 242
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=97.83 E-value=7.6e-06 Score=89.22 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=36.3
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHh-hCCCEEEEEcCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAV-SGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l-~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|...|++. ++||||+||+++++..| .+...+ .++|+||++|+||||+|+.+
T Consensus 28 ~~~~~g~~~---g~~vvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~ 80 (317)
T 1wm1_A 28 YWELSGNPN---GKPAVFIHGGPGGGISP-HHRQLFDPERYKVLLFDQRGCGRSRPH 80 (317)
T ss_dssp EEEEEECTT---SEEEEEECCTTTCCCCG-GGGGGSCTTTEEEEEECCTTSTTCBST
T ss_pred EEEEcCCCC---CCcEEEECCCCCcccch-hhhhhccccCCeEEEECCCCCCCCCCC
Confidence 344555433 68999999998765322 223334 35799999999999999764
No 243
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=97.83 E-value=2.2e-05 Score=86.26 Aligned_cols=42 Identities=29% Similarity=0.599 Sum_probs=39.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++..|..++..| +|+|+++|+||||.|+.+
T Consensus 81 ~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~ 122 (330)
T 3p2m_A 81 APRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWR 122 (330)
T ss_dssp CCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCC
T ss_pred CCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCC
Confidence 689999999999999999999999 899999999999999854
No 244
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.82 E-value=8.5e-05 Score=82.19 Aligned_cols=122 Identities=19% Similarity=0.249 Sum_probs=92.1
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHHH----HHHHHHHHHHcCCCc--EEEEEcC--
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIKD----AEVIQEVRKKVGHRI--ELRVDAN-- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~d----~~~v~~vr~~~g~~~--~l~vDaN-- 709 (983)
+++.+.++.+++.||..+.|+.+.. .+++.. ++.|++||+++|++. -+++.++
T Consensus 152 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 152 QAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 4566677777889999999998751 122222 678999999999885 4555665
Q ss_pred --CCCCHHHHHHHHhhcccCCCceeecCC------------C--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhh
Q 041113 710 --RNWTYQEALEFGFLIKDCDLQYIEEPV------------Q--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKY 773 (983)
Q Consensus 710 --~~~~~~~a~~~~~~l~~~~i~~iEeP~------------~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~ 773 (983)
++|+.++++++++.|++.++.||+-.. + +.+..+++++.+++||.+...+.+.. ....+
T Consensus 232 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e-----~a~~~ 306 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPE-----QAETL 306 (349)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHH-----HHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHH-----HHHHH
Confidence 389999999999999999999999653 1 24456788888899999999988764 35555
Q ss_pred cCCC-ceEEEE
Q 041113 774 AHPG-IVAIVI 783 (983)
Q Consensus 774 ~~~~-~~~i~~ 783 (983)
++.| +|.|.+
T Consensus 307 l~~G~aD~V~i 317 (349)
T 3hgj_A 307 LQAGSADLVLL 317 (349)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCceEEEe
Confidence 5555 788765
No 245
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=97.82 E-value=1.8e-05 Score=80.31 Aligned_cols=44 Identities=34% Similarity=0.572 Sum_probs=40.2
Q ss_pred CceEEEeCCCCCChhhHHH--HHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP--IMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~--~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|.. +.+.|.+. |+|+++|+||||.|+.+
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 78 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA 78 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTS
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCC
Confidence 7899999999999999999 58888876 99999999999998765
No 246
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=97.76 E-value=8.8e-06 Score=88.18 Aligned_cols=44 Identities=11% Similarity=0.208 Sum_probs=40.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC---CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS---ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~---~~vi~~Dl~G~G~S~~~ 981 (983)
+++|||+||+++++..|..+++.|++. |+|+++|+||||.|..+
T Consensus 36 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~ 82 (302)
T 1pja_A 36 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP 82 (302)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhh
Confidence 789999999999999999999999874 99999999999998754
No 247
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=97.68 E-value=3.4e-05 Score=80.08 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=39.9
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~ 980 (983)
+|+|||+||++++...|..+.+.|.+. |+|+++|+||||.|+.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 65 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEP 65 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCT
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCCh
Confidence 689999999999999999999999865 9999999999999954
No 248
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=97.66 E-value=7.6e-05 Score=78.50 Aligned_cols=44 Identities=20% Similarity=0.226 Sum_probs=37.1
Q ss_pred CceEEEeCCCCCChhhHHH--HHHHh-hCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP--IMKAV-SGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~--~~~~l-~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|.. +...| ..+|+|+++|+||||.|+.+
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 83 (270)
T 3llc_A 37 RPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA 83 (270)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC
T ss_pred CCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc
Confidence 6899999999999877654 66777 45799999999999999864
No 249
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=97.66 E-value=6e-05 Score=76.04 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=48.2
Q ss_pred eEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHH--HHHHhhCC-CEEEEEcCCCCCCC
Q 041113 910 LRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIP--IMKAVSGS-ARCISIDLPGHGGS 978 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~--~~~~l~~~-~~vi~~Dl~G~G~S 978 (983)
+...++.++..++.++ +...|+ +|+|||+||++++...|.. +.+.|.+. |+|+++|+||||.|
T Consensus 5 ~~~~~~~~g~~l~~~~-~~~~~~-----~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s 70 (207)
T 3bdi_A 5 QEEFIDVNGTRVFQRK-MVTDSN-----RRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRS 70 (207)
T ss_dssp EEEEEEETTEEEEEEE-ECCTTC-----CEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTS
T ss_pred eeEEEeeCCcEEEEEE-EeccCC-----CCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCccccc
Confidence 4444444443333211 345553 7899999999999999999 99999887 99999999999999
No 250
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=97.65 E-value=4.1e-05 Score=82.14 Aligned_cols=44 Identities=27% Similarity=0.496 Sum_probs=40.6
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||++++...|..+.+.|.+ .|+|+++|+||||.|..+
T Consensus 28 ~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~ 72 (290)
T 3ksr_A 28 MPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASM 72 (290)
T ss_dssp EEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGG
T ss_pred CcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCC
Confidence 78999999999999999999999987 599999999999998653
No 251
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=97.64 E-value=3.3e-05 Score=86.07 Aligned_cols=43 Identities=14% Similarity=0.307 Sum_probs=38.9
Q ss_pred CceEEEeCCCCCChhhHHHHHH------HhhCC-CEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMK------AVSGS-ARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~------~l~~~-~~vi~~Dl~G~G~S~~ 980 (983)
+|+|||+||+++++..|..+.. .|++. |+|+++|+||||.|+.
T Consensus 58 ~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~ 107 (377)
T 1k8q_A 58 RPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARR 107 (377)
T ss_dssp CCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCE
T ss_pred CCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCC
Confidence 7899999999999999987765 78775 9999999999999975
No 252
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.64 E-value=0.00035 Score=76.94 Aligned_cols=122 Identities=22% Similarity=0.267 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCCcEEEEEc----C
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHRIELRVDA----N 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~~~l~vDa----N 709 (983)
+++.+.++.+++.||..++|+.+.+ .+++. -++.+++||+++...+.+++.. +
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 4567777788889999999998741 12222 3788999999995455556655 4
Q ss_pred CCCCHHHHHHHHhhcccCCCceee--------c--CCC---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC
Q 041113 710 RNWTYQEALEFGFLIKDCDLQYIE--------E--PVQ---NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP 776 (983)
Q Consensus 710 ~~~~~~~a~~~~~~l~~~~i~~iE--------e--P~~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~ 776 (983)
++|+.+++.++++.|++.++.||+ + |.. +.+..+++++.+++||.+...+.+.. ....+++.
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~-----~a~~~l~~ 298 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGS-----MAEEILQN 298 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHH-----HHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHH-----HHHHHHHc
Confidence 589999999999999999999998 2 322 34556788888999999999988764 35555555
Q ss_pred C-ceEEEE
Q 041113 777 G-IVAIVI 783 (983)
Q Consensus 777 ~-~~~i~~ 783 (983)
| +|.|.+
T Consensus 299 G~aD~V~i 306 (338)
T 1z41_A 299 GRADLIFI 306 (338)
T ss_dssp TSCSEEEE
T ss_pred CCceEEee
Confidence 5 888765
No 253
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.62 E-value=0.00019 Score=80.02 Aligned_cols=121 Identities=13% Similarity=0.090 Sum_probs=90.1
Q ss_pred HHHHHHHHHHhh-hcCCCEEEEeccCC--------------------C-ChHH----HHHHHHHHHHHcCCC-cEEEEEc
Q 041113 656 PVEVASIATTLV-EEGFTAIKLKVARR--------------------A-DPIK----DAEVIQEVRKKVGHR-IELRVDA 708 (983)
Q Consensus 656 ~~~~~~~~~~~~-~~G~~~~KiKig~~--------------------~-~~~~----d~~~v~~vr~~~g~~-~~l~vDa 708 (983)
.+++++.++.++ +.||..|+|+.+.+ . +++. -++.|++||+++|++ +-+++.+
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~ 252 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISP 252 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECc
Confidence 445567777888 89999999998631 1 2222 257899999999865 5555555
Q ss_pred C-------CCCCHHHHHHHHhhcccCCCceeecCCC-------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhc
Q 041113 709 N-------RNWTYQEALEFGFLIKDCDLQYIEEPVQ-------NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYA 774 (983)
Q Consensus 709 N-------~~~~~~~a~~~~~~l~~~~i~~iEeP~~-------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~ 774 (983)
+ ++|+.++++++++.|+++++.|||.+.. ..+ .+++++.+++||.+.+.+ +.. .+..++
T Consensus 253 ~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~i-t~~-----~a~~~l 325 (379)
T 3aty_A 253 LNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRY-DFE-----EADQQI 325 (379)
T ss_dssp TCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSC-CHH-----HHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCC-CHH-----HHHHHH
Confidence 3 5789999999999999999999998762 135 788999999999999988 643 345555
Q ss_pred CCC-ceEEEE
Q 041113 775 HPG-IVAIVI 783 (983)
Q Consensus 775 ~~~-~~~i~~ 783 (983)
+.+ +|.|.+
T Consensus 326 ~~g~aD~V~i 335 (379)
T 3aty_A 326 REGKVDAVAF 335 (379)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCCeEEEe
Confidence 554 788764
No 254
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=97.61 E-value=6.6e-05 Score=77.38 Aligned_cols=44 Identities=25% Similarity=0.460 Sum_probs=40.6
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|..+.+.|.+. |+|+++|+||||.|..+
T Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 68 (238)
T 1ufo_A 24 KALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGP 68 (238)
T ss_dssp CEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCC
T ss_pred ccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCC
Confidence 789999999999999999999999765 99999999999999764
No 255
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=97.58 E-value=7.2e-05 Score=85.05 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=46.1
Q ss_pred EEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHH--HHhhCCCEEEEEcCCCCCCCCC
Q 041113 914 LNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIM--KAVSGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 914 ~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~--~~l~~~~~vi~~Dl~G~G~S~~ 980 (983)
+.+...+......+...+.+. .|+|||+||++++...|.... ..+..+|+|+++|+||||.|..
T Consensus 138 ~~i~~~~~~l~~~~~~~~~~~---~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~ 203 (405)
T 3fnb_A 138 IEVPFEGELLPGYAIISEDKA---QDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPN 203 (405)
T ss_dssp EEEEETTEEEEEEEECCSSSC---CCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGG
T ss_pred EEEeECCeEEEEEEEcCCCCC---CCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCC
Confidence 333334444443334444322 589999999999999998766 5567889999999999999953
No 256
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=97.57 E-value=5.4e-05 Score=70.99 Aligned_cols=46 Identities=17% Similarity=0.368 Sum_probs=37.6
Q ss_pred EEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCCC
Q 041113 926 KVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQN 982 (983)
Q Consensus 926 ~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~~ 982 (983)
++...|+ +|+|||+| ++...|..+ |+++|+|+++|+||||.|+.+.
T Consensus 15 ~~~~~g~-----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~ 60 (131)
T 2dst_A 15 VFDRVGK-----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPR 60 (131)
T ss_dssp EEEEECC-----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCC
T ss_pred EEEEcCC-----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCC
Confidence 3455554 68999999 677888887 8778999999999999998653
No 257
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=97.53 E-value=3.6e-05 Score=86.03 Aligned_cols=44 Identities=27% Similarity=0.438 Sum_probs=38.9
Q ss_pred CceEEEeCCCCCChhh---------HHHHHH---Hh-hCCCEEEEEcCCC-CCCCCCC
Q 041113 938 DNILLFLHGFLGTGEE---------WIPIMK---AV-SGSARCISIDLPG-HGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~---------w~~~~~---~l-~~~~~vi~~Dl~G-~G~S~~~ 981 (983)
+|+|||+||+++++.. |..+++ .| +++|+||++|+|| ||.|+.+
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~ 116 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGP 116 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCT
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCC
Confidence 5899999999999998 999986 48 6789999999999 6888765
No 258
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=97.52 E-value=5.3e-05 Score=84.00 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=39.6
Q ss_pred CceEEEeCCCCCChhhHH----------------HHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWI----------------PIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~----------------~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||++++...|. .+.+.|+++ |+|+++|+||||.|+.+
T Consensus 50 ~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 110 (354)
T 2rau_A 50 NDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFL 110 (354)
T ss_dssp EEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTC
T ss_pred CCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcc
Confidence 789999999999999776 899999775 99999999999999754
No 259
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=97.52 E-value=7.5e-05 Score=82.28 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=39.0
Q ss_pred CceEEEeCCCCCChhhHH-------HHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWI-------PIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~-------~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+++|||+||++.+...|. .+.+.|.+ .|+|+++|+||||+|...
T Consensus 62 ~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~ 113 (328)
T 1qlw_A 62 RYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD 113 (328)
T ss_dssp SSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC
T ss_pred CccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCC
Confidence 689999999999999998 48887765 599999999999999864
No 260
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=97.50 E-value=0.00021 Score=78.94 Aligned_cols=43 Identities=12% Similarity=0.233 Sum_probs=36.5
Q ss_pred CceEEEeCCCCCChhh---HHHHHHHhhCCCEEEEEc----CCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEE---WIPIMKAVSGSARCISID----LPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~---w~~~~~~l~~~~~vi~~D----l~G~G~S~~ 980 (983)
+|+|||+|||+.+... |..+.+.|+.+|+||++| +||||.|+.
T Consensus 38 ~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~ 87 (335)
T 2q0x_A 38 RRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDH 87 (335)
T ss_dssp SSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCH
T ss_pred CcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccc
Confidence 6899999999976553 788999998889999995 599999863
No 261
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=97.49 E-value=7.8e-05 Score=78.81 Aligned_cols=42 Identities=29% Similarity=0.392 Sum_probs=39.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+||++++...|..+++.|.+. |+|+++|+||||.|+
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 82 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHY 82 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCH
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCc
Confidence 789999999999999999999999875 999999999999986
No 262
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.49 E-value=0.00022 Score=79.46 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCCcEEEEEcC---
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHRIELRVDAN--- 709 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~~~l~vDaN--- 709 (983)
.+++++.++.+++.||..|+|+.+.+ .+++. -++.|++||+++|++ .+.++-+
T Consensus 166 i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~ 244 (376)
T 1icp_A 166 VNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFA 244 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEecccc
Confidence 35677778888889999999998641 11222 367899999999975 5555543
Q ss_pred ------CCCCHHHHHHHHhhcccCCCceeecCCC----------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhh
Q 041113 710 ------RNWTYQEALEFGFLIKDCDLQYIEEPVQ----------NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKY 773 (983)
Q Consensus 710 ------~~~~~~~a~~~~~~l~~~~i~~iEeP~~----------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~ 773 (983)
..++.++++++++.|+++++.|||-+.. +++..+++++..++||++...+ +.. .+..+
T Consensus 245 ~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~-----~a~~~ 318 (376)
T 1icp_A 245 HYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY-DRE-----DGNRA 318 (376)
T ss_dssp CTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC-CHH-----HHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC-CHH-----HHHHH
Confidence 3457888999999999999999998643 1223467788888888888877 543 24444
Q ss_pred cCCC-ceEEEE
Q 041113 774 AHPG-IVAIVI 783 (983)
Q Consensus 774 ~~~~-~~~i~~ 783 (983)
++.+ +|.|.+
T Consensus 319 l~~g~aD~V~~ 329 (376)
T 1icp_A 319 LIEDRADLVAY 329 (376)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCCcEEee
Confidence 4444 777654
No 263
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.48 E-value=0.00039 Score=84.46 Aligned_cols=122 Identities=19% Similarity=0.254 Sum_probs=91.3
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCCcEE--EEEc---
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHRIEL--RVDA--- 708 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~~~l--~vDa--- 708 (983)
+++.+.++.+++.||..++++.+.. .+++. -.+.+++||+++|+++.+ ++.+
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 5667777788889999999997641 12222 378899999999999776 4444
Q ss_pred -CCCCCHHHHHHHHhhcccCCCceee-------cCCC----------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHH
Q 041113 709 -NRNWTYQEALEFGFLIKDCDLQYIE-------EPVQ----------NEEDIIKYCEESGLPVALDETIDKFQKDPLNML 770 (983)
Q Consensus 709 -N~~~~~~~a~~~~~~l~~~~i~~iE-------eP~~----------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~ 770 (983)
+++|+.++++++++.|+++++.||+ .+.+ ..+..+++++..++||.+...+.+.. ..
T Consensus 221 ~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~-----~a 295 (671)
T 1ps9_A 221 VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQ-----VA 295 (671)
T ss_dssp STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHH-----HH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHH-----HH
Confidence 4589999999999999999999995 3322 13445788888999999999988764 35
Q ss_pred HhhcCCC-ceEEEE
Q 041113 771 EKYAHPG-IVAIVI 783 (983)
Q Consensus 771 ~~~~~~~-~~~i~~ 783 (983)
..+++.+ +|.|.+
T Consensus 296 ~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 296 DDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 5555555 788764
No 264
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=97.46 E-value=0.00011 Score=80.69 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=40.1
Q ss_pred CceEEEeCCC--CCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGF--LGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~--~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+ +++...|..+.+.|..+|+|+++|+||||.|+.+
T Consensus 81 ~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~ 126 (319)
T 3lcr_A 81 GPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQAL 126 (319)
T ss_dssp SCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCE
T ss_pred CCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCC
Confidence 7899999996 7788999999999988899999999999987753
No 265
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=97.43 E-value=5.2e-05 Score=84.25 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=37.5
Q ss_pred CceEEEeCCCCCChh-------------hHHHHHH---Hh-hCCCEEEEEcCCC--CCCCCC
Q 041113 938 DNILLFLHGFLGTGE-------------EWIPIMK---AV-SGSARCISIDLPG--HGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~-------------~w~~~~~---~l-~~~~~vi~~Dl~G--~G~S~~ 980 (983)
+|+|||+||+++++. .|..+++ .| +++|+||++|+|| ||.|..
T Consensus 46 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~ 107 (366)
T 2pl5_A 46 NNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGP 107 (366)
T ss_dssp CCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSST
T ss_pred CceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCC
Confidence 689999999999998 8999884 34 6789999999999 898864
No 266
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=97.42 E-value=5.9e-05 Score=86.87 Aligned_cols=56 Identities=16% Similarity=0.297 Sum_probs=42.8
Q ss_pred EEEeecCCccCCCCceEEEeCCCCCChhh---HHHHHH---Hh-hCCCEEEEEcCCC--CCCCCC
Q 041113 925 IKVQEIGQRIDIQDNILLFLHGFLGTGEE---WIPIMK---AV-SGSARCISIDLPG--HGGSKM 980 (983)
Q Consensus 925 ~~~~~~g~~~~~~~~~lv~lHG~~~~~~~---w~~~~~---~l-~~~~~vi~~Dl~G--~G~S~~ 980 (983)
++|...|+.....+|+|||+||+++++.. |..++. .| +++|+||++|+|| ||.|+.
T Consensus 96 l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~ 160 (444)
T 2vat_A 96 VAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGP 160 (444)
T ss_dssp EEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSST
T ss_pred EEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCC
Confidence 34455554211125899999999999999 999886 57 6789999999999 698863
No 267
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=97.34 E-value=0.00013 Score=78.97 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=38.1
Q ss_pred CceEEEeCCCCCCh-hhHH-HHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWI-PIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~-~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
+++|||||||+++. ..|. .+.+.|.+ .|+|+++|+||||.++
T Consensus 65 ~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~ 109 (316)
T 3icv_A 65 SKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLND 109 (316)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSC
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCc
Confidence 67999999999998 7998 89999976 5999999999999875
No 268
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=97.34 E-value=0.00046 Score=71.32 Aligned_cols=71 Identities=10% Similarity=0.009 Sum_probs=48.6
Q ss_pred eeEEEEEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
++.+.+.+...+.............. ...|.|||+||++++...|..+.+.|++ .|.|+++|++|||.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~ 75 (241)
T 3f67_A 4 IIAGETSIPSQGENMPAYHARPKNAD-GPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPN 75 (241)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTCC-SCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGG
T ss_pred ceeeeEEEecCCcceEEEEecCCCCC-CCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCC
Confidence 45555555544444333222221110 1158999999999999999999999965 59999999999987653
No 269
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.34 E-value=0.00041 Score=77.06 Aligned_cols=122 Identities=18% Similarity=0.171 Sum_probs=88.6
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHHH----HHHHHHHHHHcCCCc--EEEEEcCC-
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIKD----AEVIQEVRKKVGHRI--ELRVDANR- 710 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~d----~~~v~~vr~~~g~~~--~l~vDaN~- 710 (983)
+++.+.++.+++.||..+.|+.+.. .+++.. ++.|++||+++|+++ -+++.++.
T Consensus 158 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~ 237 (363)
T 3l5l_A 158 QDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEY 237 (363)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhc
Confidence 4556667777789999999998631 122222 678999999999885 44555432
Q ss_pred ---C-CCHHHHHHHHhhcccCCCceeecCC-----------C---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHh
Q 041113 711 ---N-WTYQEALEFGFLIKDCDLQYIEEPV-----------Q---NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEK 772 (983)
Q Consensus 711 ---~-~~~~~a~~~~~~l~~~~i~~iEeP~-----------~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~ 772 (983)
+ |+.++++++++.|++.++.||+-.. . +.+..+++++..++||.+...+.+.. ....
T Consensus 238 ~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e-----~a~~ 312 (363)
T 3l5l_A 238 DGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQ-----LAEA 312 (363)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHH-----HHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHH-----HHHH
Confidence 3 8899999999999999999998432 1 23445788888899999999988764 3555
Q ss_pred hcCCC-ceEEEE
Q 041113 773 YAHPG-IVAIVI 783 (983)
Q Consensus 773 ~~~~~-~~~i~~ 783 (983)
+++.| +|.|.+
T Consensus 313 ~l~~G~aD~V~i 324 (363)
T 3l5l_A 313 ALQANQLDLVSV 324 (363)
T ss_dssp HHHTTSCSEEEC
T ss_pred HHHCCCccEEEe
Confidence 55555 787764
No 270
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.34 E-value=0.00062 Score=75.53 Aligned_cols=121 Identities=17% Similarity=0.106 Sum_probs=88.2
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCC-cEEEEEcC---
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHR-IELRVDAN--- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~-~~l~vDaN--- 709 (983)
+++++.++.+++.||..|+|+.+.. .+++. -++.+++||+++|++ +-+++-++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 5677777778889999999988631 11222 367799999999876 34444443
Q ss_pred -----CCCCHHHHHHHHhhcccCCCceeecCCC--------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC
Q 041113 710 -----RNWTYQEALEFGFLIKDCDLQYIEEPVQ--------NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP 776 (983)
Q Consensus 710 -----~~~~~~~a~~~~~~l~~~~i~~iEeP~~--------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~ 776 (983)
+.++.++++++++.|+++++.||+-... .++..+++++.+++||++...+ +.. .+..+++.
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi-t~~-----~a~~~l~~ 314 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY-TAE-----KAEDLIGK 314 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHH-----HHHHHHHT
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc-CHH-----HHHHHHHC
Confidence 3568889999999999999999998652 2455678888899999999888 543 35555555
Q ss_pred C-ceEEEE
Q 041113 777 G-IVAIVI 783 (983)
Q Consensus 777 ~-~~~i~~ 783 (983)
+ +|.|.+
T Consensus 315 g~aD~V~~ 322 (364)
T 1vyr_A 315 GLIDAVAF 322 (364)
T ss_dssp TSCSEEEE
T ss_pred CCccEEEE
Confidence 5 787664
No 271
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=97.23 E-value=0.0001 Score=83.09 Aligned_cols=43 Identities=26% Similarity=0.340 Sum_probs=38.6
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-----CC---EEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-----SA---RCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-----~~---~vi~~Dl~G~G~S~~ 980 (983)
+|+|||+||++++...|..+++.|.+ +| +||++|+||||.|+.
T Consensus 52 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~ 102 (398)
T 2y6u_A 52 RLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAV 102 (398)
T ss_dssp EEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHH
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCC
Confidence 37999999999999999999999982 36 999999999999864
No 272
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.21 E-value=0.0017 Score=71.14 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccC---------C----------CChHHH----HHHHHHHHHHcCCCcEE--EEEcC--
Q 041113 657 VEVASIATTLVEEGFTAIKLKVAR---------R----------ADPIKD----AEVIQEVRKKVGHRIEL--RVDAN-- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~---------~----------~~~~~d----~~~v~~vr~~~g~~~~l--~vDaN-- 709 (983)
+++.+.++.+++.||..+.|+.+. + .+++.. ++.|++||+++|+++.+ ++-++
T Consensus 143 ~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~ 222 (343)
T 3kru_A 143 KAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDY 222 (343)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCS
T ss_pred HHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhh
Confidence 455666777778999999999431 1 123222 67899999999988544 44443
Q ss_pred --CCCCHHHHHHHHhhcccCCCceeecCC----------C---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhc
Q 041113 710 --RNWTYQEALEFGFLIKDCDLQYIEEPV----------Q---NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYA 774 (983)
Q Consensus 710 --~~~~~~~a~~~~~~l~~~~i~~iEeP~----------~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~ 774 (983)
++|+.++++++++.|++. +.||+-.. . +.+-.+++++..++||.+...+.+.. ....++
T Consensus 223 ~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e-----~Ae~~l 296 (343)
T 3kru_A 223 MEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQE-----LAEEIL 296 (343)
T ss_dssp STTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHH-----HHHHHH
T ss_pred hccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHH-----HHHHHH
Confidence 478999999999999999 99998731 1 24445778888899999998887754 344555
Q ss_pred CCC-ceEEEE
Q 041113 775 HPG-IVAIVI 783 (983)
Q Consensus 775 ~~~-~~~i~~ 783 (983)
+.| +|.|.+
T Consensus 297 ~~G~aD~V~i 306 (343)
T 3kru_A 297 SNERADLVAL 306 (343)
T ss_dssp HTTSCSEEEE
T ss_pred hchhhHHHHH
Confidence 545 787654
No 273
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=97.19 E-value=0.00012 Score=77.76 Aligned_cols=43 Identities=9% Similarity=0.178 Sum_probs=39.4
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+++|||+||+++++..|..+.+ |+++|+|+++|+||||.++.+
T Consensus 21 ~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~ 63 (265)
T 3ils_A 21 RKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENM 63 (265)
T ss_dssp SEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGC
T ss_pred CCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCC
Confidence 7899999999999999999999 988899999999999877643
No 274
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=97.19 E-value=0.00012 Score=79.53 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=40.9
Q ss_pred CceEEEeCCCCCCh--hhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG--EEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~--~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
+|+|||+||+++++ ..|..+...|..+|+|+++|+||||.|+.+
T Consensus 67 ~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~ 112 (300)
T 1kez_A 67 EVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPL 112 (300)
T ss_dssp SSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCB
T ss_pred CCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCC
Confidence 78999999999988 999999999988899999999999998754
No 275
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=97.17 E-value=0.00069 Score=74.80 Aligned_cols=44 Identities=20% Similarity=0.527 Sum_probs=40.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||++++...|..+...++.+|.|+++|+||||.|+.+
T Consensus 108 ~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~ 151 (346)
T 3fcy_A 108 HPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQD 151 (346)
T ss_dssp EEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCC
T ss_pred cCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCC
Confidence 68999999999999999998888888899999999999988764
No 276
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=97.16 E-value=0.00062 Score=71.23 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=35.9
Q ss_pred CceEEEeCCCCC---Ch--hhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLG---TG--EEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~---~~--~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||+++ +. ..|..+.+.|.+. |+|+++|+||||.|..+
T Consensus 47 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 96 (249)
T 2i3d_A 47 APIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE 96 (249)
T ss_dssp CCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred CCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Confidence 688999999843 22 4578888888765 99999999999999764
No 277
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=97.15 E-value=0.00069 Score=73.55 Aligned_cols=44 Identities=23% Similarity=0.189 Sum_probs=39.8
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||++ ++...|..+...|++ +|+|+++|+||||.|..+
T Consensus 73 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~ 121 (311)
T 2c7b_A 73 LPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFP 121 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTT
T ss_pred CcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCC
Confidence 58899999999 899999999999976 699999999999998754
No 278
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=97.14 E-value=0.00065 Score=68.67 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=37.7
Q ss_pred CceEEEeCC-----CCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHG-----FLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG-----~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+|| ...+...|..+.+.|.+. |+|+++|+||||.|..+
T Consensus 31 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 31 SVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred CCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 789999999 445567799999999765 99999999999999764
No 279
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=97.09 E-value=0.00085 Score=80.79 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=81.2
Q ss_pred CCCCCccchHHHHHhhhhcc-CceEEEEEccchhhhc----cchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCC
Q 041113 320 RGASGIDGLLSTAIGFAVGC-NKHVLCVVGDISFLHD----TNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTE 394 (983)
Q Consensus 320 ~G~mG~~g~lpaaiGaalA~-~~~vv~i~GDGsf~~~----~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~ 394 (983)
-|.+|+ |++.|+|+++.+ +.+|+|++|||...=. ..|+...+. .+++.-+++|+++|++.+-..
T Consensus 174 tG~LGq--Gls~AvG~A~~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~-~~~l~nl~~i~D~N~~~i~g~-------- 242 (845)
T 3ahc_A 174 GGELGY--ALSHAYGAVMNNPSLFVPCIIGDGEAETGPLATGWQSNKLVN-PRTDGIVLPILHLNGYKIANP-------- 242 (845)
T ss_dssp CSSTTC--HHHHHHHHHTTCTTCEEEEEEETTGGGSHHHHHHGGGGGSCC-TTTSCEEEEEEEECSBSSSSB--------
T ss_pred CCCccc--hHhHHhhhhhcCCCCeEEEEECCCchhhhcchhhhHHhhhhh-hhcCCCEEEEEECCCCcCCCC--------
Confidence 489999 999999999988 8999999999994310 112222221 267877889999999876421
Q ss_pred ccccccccccCCCCCHHHHHHHcCCcee-eeC-----CHHHHHHHHHhhh---------------c--cCCC--EEEEEE
Q 041113 395 PRILDQYFYTTHNISIQNLCLAHGLNHV-QVK-----TKVELEEALSMSQ---------------H--LGTD--RVIEVE 449 (983)
Q Consensus 395 ~~~~~~~~~~~~~~df~~la~a~G~~~~-~v~-----~~~eL~~aL~~a~---------------~--~~~p--~lIeV~ 449 (983)
.... ....-|+.+.-++||.+.+ .|+ +.+++.+++++++ + .++| .+|-+.
T Consensus 243 -t~l~----~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~Ii~r 317 (845)
T 3ahc_A 243 -TILA----RISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPMLIFR 317 (845)
T ss_dssp -CHHH----HSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEEEEE
T ss_pred -cccc----ccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEEEEE
Confidence 0000 0012367888899999987 665 5777776654322 2 3689 999999
Q ss_pred cCccc
Q 041113 450 SCIDA 454 (983)
Q Consensus 450 ~~~~~ 454 (983)
|.+..
T Consensus 318 T~kG~ 322 (845)
T 3ahc_A 318 TPKGW 322 (845)
T ss_dssp CCTTT
T ss_pred CcccC
Confidence 87644
No 280
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=97.09 E-value=0.0016 Score=70.26 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=39.0
Q ss_pred CceEEEeCCCCCC-hhhHHHHHHHhhCCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGT-GEEWIPIMKAVSGSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~-~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~~~ 981 (983)
.|.|||+||++++ ...|.........+|.|+++|+||||.|..+
T Consensus 82 ~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~ 126 (318)
T 1l7a_A 82 HPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDT 126 (318)
T ss_dssp EEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCC
T ss_pred ccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCc
Confidence 5889999999999 9999988766667899999999999998754
No 281
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=97.06 E-value=0.0013 Score=71.99 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=50.7
Q ss_pred eeEEEEEEccc----CceeEEEEeecCCccCCCCceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCC
Q 041113 909 VLRYQLNVNSK----DFCSFIKVQEIGQRIDIQDNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSK 979 (983)
Q Consensus 909 ~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~ 979 (983)
.+.+.+.+... .+.++++....+.+. .|+|||+||++ ++...|..++..|.+ +|+|+++|+||||.|.
T Consensus 49 ~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~---~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 49 VSLRELSAPGLDGDPEVKIRFVTPDNTAGP---VPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp EEEEEEEECCSTTCCCEEEEEEEESSCCSC---EEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred ceEEEEEecCCCCCceeEEEEEecCCCCCC---CcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 45555666543 244444443322222 68999999998 889999999988875 5999999999999987
Q ss_pred CC
Q 041113 980 MQ 981 (983)
Q Consensus 980 ~~ 981 (983)
.+
T Consensus 126 ~~ 127 (323)
T 1lzl_A 126 FP 127 (323)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 282
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=97.06 E-value=0.001 Score=70.40 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=37.1
Q ss_pred eeEEEEEEcccCceeEEE-EeecCCccCCCCceEEEeCCCCCChh--hHHHHHHHhhCC-CEEEEEcCCCCCCCCC
Q 041113 909 VLRYQLNVNSKDFCSFIK-VQEIGQRIDIQDNILLFLHGFLGTGE--EWIPIMKAVSGS-ARCISIDLPGHGGSKM 980 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~lv~lHG~~~~~~--~w~~~~~~l~~~-~~vi~~Dl~G~G~S~~ 980 (983)
.+++.+++..++....-. +...+... .|.||++||++.+.. .+..+.+.|++. |.|+++|+||||.|..
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~~~~---~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~ 101 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAEGSS---DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERAS 101 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSSCC---SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCCCCC---CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCC
Confidence 455666666665544432 22333322 577899999998854 456778888665 9999999999998864
No 283
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=97.06 E-value=0.00042 Score=71.39 Aligned_cols=43 Identities=7% Similarity=0.094 Sum_probs=39.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|.|||+||++++...|..+.+.|.+ +|.|+++|+||||.|..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 71 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGT 71 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTC
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcc
Confidence 57899999999999999999999976 69999999999998853
No 284
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=97.03 E-value=0.00042 Score=72.47 Aligned_cols=42 Identities=21% Similarity=0.406 Sum_probs=39.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEE--cCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISI--DLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~--Dl~G~G~S~ 979 (983)
+|+|||+||++++...|..+.+.|+++|+|+++ |++|||.|.
T Consensus 62 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~ 105 (251)
T 2r8b_A 62 APLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAAR 105 (251)
T ss_dssp SCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEE
T ss_pred CcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcc
Confidence 789999999999999999999999988999999 899999874
No 285
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=97.00 E-value=0.0011 Score=72.17 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=39.7
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhh--CCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVS--GSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~--~~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||++ ++...|..+...|+ .+|.|+++|+||||+|..+
T Consensus 79 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p 127 (311)
T 1jji_A 79 SPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFP 127 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTT
T ss_pred ceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCC
Confidence 68999999999 89999999999997 3699999999999998764
No 286
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=96.98 E-value=0.0018 Score=65.86 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=36.3
Q ss_pred CceEEEeCCCC---C--ChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---G--TGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~--~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
.|.|||+||++ + +...|..+.+.|.+ .|+|+++|+||||.|+.+
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 86 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS 86 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 68999999953 3 44568899999977 499999999999999754
No 287
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=96.97 E-value=0.00065 Score=69.08 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=36.2
Q ss_pred CceEEEeCCCCCChhhH--HHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEW--IPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w--~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
.|+|||+||++++...| ..+.+.|.+ .|.|+++|+||||.|.
T Consensus 35 ~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~ 79 (223)
T 2o2g_A 35 TGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEE 79 (223)
T ss_dssp CEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHH
T ss_pred ceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCC
Confidence 78999999999998865 467888876 5999999999999764
No 288
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=96.95 E-value=0.0018 Score=71.69 Aligned_cols=43 Identities=12% Similarity=-0.017 Sum_probs=38.1
Q ss_pred CceEEEeCCCCCChhhHHH-HHHHhhCC-CEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP-IMKAVSGS-ARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~-~~~~l~~~-~~vi~~Dl~G~G~S~~ 980 (983)
.|+|||+||++++...|.. +.+.|.+. |.|+++|+||||.|..
T Consensus 96 ~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 96 LPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 5889999999999999986 78888765 9999999999999874
No 289
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=96.95 E-value=0.0006 Score=74.52 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=38.2
Q ss_pred CceEEEeCCCCCChhh-HH-HHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEE-WI-PIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~-w~-~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
+++|||+||++++... |. .+.+.|.+ .|+|+++|+||||.++
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~ 75 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND 75 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCc
Confidence 6799999999999997 99 89999976 5999999999999875
No 290
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=96.95 E-value=0.00071 Score=71.35 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=38.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+||++++...|..+.+.|.+ .|+|+++|+||||.|.
T Consensus 54 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 96 (262)
T 1jfr_A 54 FGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP 96 (262)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH
T ss_pred CCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 68999999999999999999999976 4999999999999874
No 291
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.94 E-value=0.0027 Score=70.69 Aligned_cols=121 Identities=12% Similarity=0.048 Sum_probs=82.6
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCC-cEEEEEcC---
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHR-IELRVDAN--- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~-~~l~vDaN--- 709 (983)
+++++.++.+++.||..|+|+.+.. .+++. -++.+++||+++|++ +-+++-++
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 5677777778889999999998631 12222 367899999999875 44555343
Q ss_pred ----CCCCHHHHHHHHhhcccCCCceeecCCC---------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC
Q 041113 710 ----RNWTYQEALEFGFLIKDCDLQYIEEPVQ---------NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP 776 (983)
Q Consensus 710 ----~~~~~~~a~~~~~~l~~~~i~~iEeP~~---------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~ 776 (983)
++|+.++++++++.|++.++.||+-... +++-.+++++..++||.+...+ +.. ....+++.
T Consensus 246 ~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi-~~~-----~a~~~l~~ 319 (377)
T 2r14_A 246 FGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY-DAG-----RAQARLDD 319 (377)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC-CHH-----HHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC-CHH-----HHHHHHHC
Confidence 4678899999999999999999986442 1333466777777777776666 332 24444444
Q ss_pred C-ceEEEE
Q 041113 777 G-IVAIVI 783 (983)
Q Consensus 777 ~-~~~i~~ 783 (983)
+ +|.|.+
T Consensus 320 g~aD~V~i 327 (377)
T 2r14_A 320 NTADAVAF 327 (377)
T ss_dssp TSCSEEEE
T ss_pred CCceEEee
Confidence 4 666553
No 292
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=96.93 E-value=0.00032 Score=80.54 Aligned_cols=42 Identities=24% Similarity=0.591 Sum_probs=37.8
Q ss_pred CceEEEeCCCCCCh-hhHHH-HHHHhhC--CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIP-IMKAVSG--SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~-~~~~l~~--~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+|||+++. ..|.. +.+.|.+ +|+||++|++|||.|.
T Consensus 70 ~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~ 115 (452)
T 1w52_X 70 RKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAE 115 (452)
T ss_dssp SCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC
T ss_pred CCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccc
Confidence 78999999999998 78988 7788765 7999999999999986
No 293
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=96.92 E-value=0.0019 Score=68.50 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=36.5
Q ss_pred CceEEEeCC---CCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHG---FLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG---~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
.|+|||+|| ++++...|..+.+.|.+ .|+|+++|+||||.+.
T Consensus 35 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 35 YPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred ccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 689999999 77888899999998875 5999999999998443
No 294
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=96.92 E-value=0.001 Score=72.16 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=39.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++++...|..+.+.|.+. |.|+++|+||+|.|.
T Consensus 96 ~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~ 138 (306)
T 3vis_A 96 YGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQP 138 (306)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCH
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCc
Confidence 688999999999999999999999876 999999999999884
No 295
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=96.91 E-value=0.00033 Score=80.48 Aligned_cols=42 Identities=21% Similarity=0.576 Sum_probs=37.6
Q ss_pred CceEEEeCCCCCCh-hhHHH-HHHHhhC--CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIP-IMKAVSG--SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~-~~~~l~~--~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+|||+++. ..|.. +.+.|.+ +|+||++|++|||.|.
T Consensus 70 ~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~ 115 (452)
T 1bu8_A 70 RKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE 115 (452)
T ss_dssp SEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC
T ss_pred CCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCc
Confidence 78999999999999 79998 6677764 7999999999999986
No 296
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=96.90 E-value=0.0015 Score=70.84 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=39.4
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||.+ ++...|..+...|++ +|.|+++|+||+|.|..+
T Consensus 76 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~ 124 (313)
T 2wir_A 76 LPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKFP 124 (313)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSCTT
T ss_pred ccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCCCC
Confidence 58899999977 899999999999975 699999999999998754
No 297
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=96.89 E-value=0.00033 Score=80.07 Aligned_cols=42 Identities=24% Similarity=0.641 Sum_probs=36.3
Q ss_pred CceEEEeCCCCCCh-hhHHH-HHHHh--hCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIP-IMKAV--SGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~-~~~~l--~~~~~vi~~Dl~G~G~S~ 979 (983)
+|++||||||+++. ..|.. +.+.| ..+|+||++|+||||.|.
T Consensus 69 ~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~ 114 (449)
T 1hpl_A 69 RKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTA 114 (449)
T ss_dssp SEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC
T ss_pred CCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCc
Confidence 68999999999996 68987 66776 467999999999999986
No 298
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.88 E-value=0.0053 Score=67.36 Aligned_cols=122 Identities=17% Similarity=0.199 Sum_probs=89.3
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccC---------C----------CChHHH----HHHHHHHHHHcCCCcEEEEEcC----
Q 041113 657 VEVASIATTLVEEGFTAIKLKVAR---------R----------ADPIKD----AEVIQEVRKKVGHRIELRVDAN---- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~---------~----------~~~~~d----~~~v~~vr~~~g~~~~l~vDaN---- 709 (983)
+++.+.++.+++.||..+.|+.+. + .+++.. ++.+++||+++.-.+.+++-++
T Consensus 144 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 144 QAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 456666777778999999999873 1 123332 6789999999955567777765
Q ss_pred CCCCHHHHHHHHhhcccCCCceeecC--------C--C---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCC
Q 041113 710 RNWTYQEALEFGFLIKDCDLQYIEEP--------V--Q---NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHP 776 (983)
Q Consensus 710 ~~~~~~~a~~~~~~l~~~~i~~iEeP--------~--~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~ 776 (983)
++|+.++..++++.|++.++.||+-- . . +.+-.+++++..++||.+.-.+.+.. ....+++.
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e-----~a~~~L~~ 298 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGW-----QAEEILQN 298 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHH-----HHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHH-----HHHHHHHC
Confidence 47899999999999999999888742 1 1 34455788888899999988877754 34555555
Q ss_pred C-ceEEEE
Q 041113 777 G-IVAIVI 783 (983)
Q Consensus 777 ~-~~~i~~ 783 (983)
| +|.|.+
T Consensus 299 G~aD~V~i 306 (340)
T 3gr7_A 299 GRADLVFL 306 (340)
T ss_dssp TSCSEEEE
T ss_pred CCeeEEEe
Confidence 5 787764
No 299
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=96.88 E-value=0.0013 Score=68.88 Aligned_cols=42 Identities=10% Similarity=0.196 Sum_probs=36.6
Q ss_pred CceEEEeCCCC---CChhhHH-HHHHHhhCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWI-PIMKAVSGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~-~~~~~l~~~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+||++ ++...|. .+.+.|++.|+|+++|+||+|.+.
T Consensus 29 ~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 29 KGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVS 74 (275)
T ss_dssp SEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSC
T ss_pred CCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccc
Confidence 78999999999 7777775 788888888999999999999875
No 300
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=96.86 E-value=0.00092 Score=67.78 Aligned_cols=41 Identities=32% Similarity=0.450 Sum_probs=37.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEc-------------CCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISID-------------LPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~D-------------l~G~G~S~ 979 (983)
.| |||+||++++...|..+.+.|..+|+|+++| ++|||++.
T Consensus 17 ~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~ 70 (209)
T 3og9_A 17 AP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFT 70 (209)
T ss_dssp CC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCS
T ss_pred CC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccc
Confidence 56 9999999999999999999999889999999 88888764
No 301
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=96.84 E-value=0.0027 Score=69.48 Aligned_cols=44 Identities=27% Similarity=0.480 Sum_probs=39.5
Q ss_pred CceEEEeCC---CCCChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHG---FLGTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG---~~~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+|| +.++...|..+...|++ +|+|+++|+||+|++..+
T Consensus 90 ~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p 138 (323)
T 3ain_A 90 YGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFP 138 (323)
T ss_dssp CCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred CcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCc
Confidence 689999999 56899999999999986 799999999999998754
No 302
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=96.79 E-value=0.0025 Score=67.90 Aligned_cols=41 Identities=7% Similarity=-0.021 Sum_probs=35.8
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhCC-CEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSGS-ARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S 978 (983)
.|+|||+||.+ ++...|..+++.|++. |+|+++|+||+|.|
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~ 94 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQ 94 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTC
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCcc
Confidence 68999999943 5667899999999765 99999999999987
No 303
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=96.76 E-value=0.00064 Score=69.66 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=39.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEE--cCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISI--DLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~--Dl~G~G~S~ 979 (983)
.|+|||+||++++...|..+...|++.|.|+++ |+||+|.|.
T Consensus 38 ~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~ 81 (226)
T 2h1i_A 38 KPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPR 81 (226)
T ss_dssp SCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEE
T ss_pred CcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchh
Confidence 789999999999999999999999999999999 999999874
No 304
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=96.76 E-value=0.00033 Score=79.85 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=38.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-C---EEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-A---RCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~---~vi~~Dl~G~G~S 978 (983)
+++|||+||+++++..|..+++.|.+. | +|+++|+||||.|
T Consensus 22 ~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S 66 (484)
T 2zyr_A 22 FRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWA 66 (484)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcc
Confidence 789999999999999999999999875 8 8999999999976
No 305
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.70 E-value=0.0058 Score=67.77 Aligned_cols=121 Identities=14% Similarity=0.078 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChH----HHHHHHHHHHHHcCCC-cEEEEEcC---
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPI----KDAEVIQEVRKKVGHR-IELRVDAN--- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~----~d~~~v~~vr~~~g~~-~~l~vDaN--- 709 (983)
+++++.++.+++.||..|+|+.+.+ .+++ --.+.|++||+++|++ +-+++-++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 5666777777889999999987531 1222 2357799999999875 44444443
Q ss_pred ----CCCCHHHHHHHHhhcccCCCceeecCCC--------ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC
Q 041113 710 ----RNWTYQEALEFGFLIKDCDLQYIEEPVQ--------NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG 777 (983)
Q Consensus 710 ----~~~~~~~a~~~~~~l~~~~i~~iEeP~~--------~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~ 777 (983)
++++.+++.++++.|++.++.||+-... .++-.+++++.+++||.+...+ +.. ....+++.+
T Consensus 241 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~-----~a~~~l~~g 314 (365)
T 2gou_A 241 NGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY-NAE-----KAEQAINDG 314 (365)
T ss_dssp TSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHH-----HHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC-CHH-----HHHHHHHCC
Confidence 4578899999999999999999986542 1344577888888898888777 543 344455444
Q ss_pred -ceEEEE
Q 041113 778 -IVAIVI 783 (983)
Q Consensus 778 -~~~i~~ 783 (983)
+|.|.+
T Consensus 315 ~aD~V~i 321 (365)
T 2gou_A 315 LADMIGF 321 (365)
T ss_dssp SCSEEEC
T ss_pred Ccceehh
Confidence 777653
No 306
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=96.69 E-value=0.003 Score=71.82 Aligned_cols=43 Identities=14% Similarity=0.315 Sum_probs=36.3
Q ss_pred CceEEEeCCCCCCh-hhHHHHHHHhh-CCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIPIMKAVS-GSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~~~~~l~-~~~~vi~~Dl~G~G~S~~ 980 (983)
.|+|||+||++++. ..|..+...|. .+|+|+++|+||||.|..
T Consensus 193 ~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~ 237 (415)
T 3mve_A 193 HPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSK 237 (415)
T ss_dssp EEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTT
T ss_pred CCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCC
Confidence 68999999999995 46666677774 569999999999999975
No 307
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.68 E-value=0.0059 Score=67.26 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCC-cEEEEEcCC-
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHR-IELRVDANR- 710 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~-~~l~vDaN~- 710 (983)
.+++++.++.+++.||..|+|+.+.. .+++. -++.|++||+++|++ +-+++-++.
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~ 239 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc
Confidence 35666777778889999999998741 12222 267899999999875 445555542
Q ss_pred ------CCCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEE
Q 041113 711 ------NWTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAI 781 (983)
Q Consensus 711 ------~~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i 781 (983)
.++.+++.++++.|++.++.||+-... ..+-.+++++..++||.+...+ +.. ....+++.+ +|.|
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi-t~e-----~a~~~l~~G~aD~V 313 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNENF-TLD-----SAQAALDAGQADAV 313 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESSC-CHH-----HHHHHHHTTSCSEE
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCCC-CHH-----HHHHHHHcCCccEE
Confidence 234678999999999999999997765 1234567777778888777666 543 344445444 6766
Q ss_pred EE
Q 041113 782 VI 783 (983)
Q Consensus 782 ~~ 783 (983)
.+
T Consensus 314 ~i 315 (361)
T 3gka_A 314 AW 315 (361)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 308
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=96.64 E-value=0.0031 Score=68.24 Aligned_cols=44 Identities=23% Similarity=0.331 Sum_probs=39.4
Q ss_pred CceEEEeCC---CCCChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHG---FLGTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG---~~~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+|| ++++...|..+...|++ .|+|+++|+||+|.+..+
T Consensus 74 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~ 122 (310)
T 2hm7_A 74 YPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP 122 (310)
T ss_dssp EEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred CCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC
Confidence 689999999 88999999999999976 599999999999987654
No 309
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=96.63 E-value=0.00082 Score=73.91 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=39.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+||++++...|..+.+.|.++|+|+++|+||||.+.
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~ 142 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPM 142 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHH
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCC
Confidence 789999999999999999999999889999999999999764
No 310
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=96.62 E-value=0.0007 Score=77.39 Aligned_cols=42 Identities=24% Similarity=0.610 Sum_probs=35.2
Q ss_pred CceEEEeCCCCCChh-hHHH-HHHHh-hC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE-EWIP-IMKAV-SG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~-~w~~-~~~~l-~~-~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||||||+++.. .|.. +.+.| .. +|+||++|+||||.|.
T Consensus 70 ~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~ 115 (450)
T 1rp1_A 70 KKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTS 115 (450)
T ss_dssp SEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC
T ss_pred CCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCc
Confidence 689999999999876 8987 55655 33 6999999999999875
No 311
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.61 E-value=0.0063 Score=67.04 Aligned_cols=121 Identities=12% Similarity=0.067 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHHH----HHHHHHHHHHcCCC-cEEEEEcCCC-
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIKD----AEVIQEVRKKVGHR-IELRVDANRN- 711 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~d----~~~v~~vr~~~g~~-~~l~vDaN~~- 711 (983)
+++.+.++.+++.||..|.|+.+.. .+++.. ++.|++||+++|++ +-+++-++..
T Consensus 153 ~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~ 232 (362)
T 4ab4_A 153 EAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc
Confidence 4556667777889999999998741 122222 67899999999875 4445544421
Q ss_pred ------CCHHHHHHHHhhcccCCCceeecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC-ceEEE
Q 041113 712 ------WTYQEALEFGFLIKDCDLQYIEEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG-IVAIV 782 (983)
Q Consensus 712 ------~~~~~a~~~~~~l~~~~i~~iEeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~ 782 (983)
++.++++++++.|++.++.||+-... ..+-.+++++..++||.+...+ +.. ....+++.+ +|.|.
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi-t~e-----~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNERF-DKA-----SANAALASGKADAVA 306 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESSC-CHH-----HHHHHHHTTSCSEEE
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCCC-CHH-----HHHHHHHcCCccEEE
Confidence 23678999999999999999997654 1234567777778888776665 543 244444444 67665
Q ss_pred E
Q 041113 783 I 783 (983)
Q Consensus 783 ~ 783 (983)
+
T Consensus 307 i 307 (362)
T 4ab4_A 307 F 307 (362)
T ss_dssp E
T ss_pred E
Confidence 3
No 312
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=96.59 E-value=0.0023 Score=65.49 Aligned_cols=36 Identities=28% Similarity=0.534 Sum_probs=33.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhh---CCCEEEEEcCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVS---GSARCISIDLP 973 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~---~~~~vi~~Dl~ 973 (983)
+|+|||+||++++...|..+++.|. ..|+|+++|+|
T Consensus 24 ~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p 62 (226)
T 3cn9_A 24 DACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAP 62 (226)
T ss_dssp CEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCC
T ss_pred CCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCC
Confidence 7899999999999999999999998 67999998777
No 313
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=96.54 E-value=0.00078 Score=77.01 Aligned_cols=42 Identities=24% Similarity=0.639 Sum_probs=37.9
Q ss_pred CceEEEeCCCCCCh-hhHHH-HHHHhhC--CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIP-IMKAVSG--SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~-~~~~l~~--~~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+|||+++. ..|.. +.+.|.+ +|+|+++|+||||.|.
T Consensus 70 ~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~ 115 (432)
T 1gpl_A 70 RKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ 115 (432)
T ss_dssp SEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC
T ss_pred CCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCcc
Confidence 78999999999999 68988 7888864 7999999999999986
No 314
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=96.38 E-value=0.0031 Score=65.91 Aligned_cols=40 Identities=10% Similarity=0.098 Sum_probs=37.7
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGG 977 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~ 977 (983)
+++|||+||++++...|..+.+.|.++|+|+++|+||++.
T Consensus 22 ~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~~ 61 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEEDS 61 (244)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCSTT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHHH
Confidence 6899999999999999999999999889999999999864
No 315
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=96.33 E-value=0.0025 Score=65.06 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=35.6
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGH 975 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~ 975 (983)
+|+|||+||++++...|..+.+.|.+.|+|+++|.||+
T Consensus 30 ~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~ 67 (223)
T 3b5e_A 30 RECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIP 67 (223)
T ss_dssp CCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEE
T ss_pred CCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 68999999999999999999999988999999998874
No 316
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=96.30 E-value=0.0029 Score=65.12 Aligned_cols=40 Identities=13% Similarity=0.230 Sum_probs=37.4
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S 978 (983)
+++|+|+||++++...|..+.+.|.+ |+|+++|+||+|..
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~~ 56 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEEDR 56 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTTH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHHH
Confidence 67999999999999999999999988 99999999999853
No 317
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=96.21 E-value=0.0015 Score=73.93 Aligned_cols=42 Identities=14% Similarity=0.348 Sum_probs=35.4
Q ss_pred CceEEEeCCCCCC--------hhhHH----HHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGT--------GEEWI----PIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~--------~~~w~----~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
++||||+||++++ ...|. .+.+.|.+ .|+|+++|+||||.|.
T Consensus 52 ~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~ 106 (431)
T 2hih_A 52 KDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNH 106 (431)
T ss_dssp SSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHH
T ss_pred CCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCc
Confidence 6899999999874 35685 58898865 5999999999999875
No 318
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=96.19 E-value=0.0022 Score=72.40 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=35.7
Q ss_pred CceEEEeCCCCCChhh-----------HHHHHHHhh-CCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEE-----------WIPIMKAVS-GSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~-----------w~~~~~~l~-~~~~vi~~Dl~G~G~S~~~ 981 (983)
.|.|||+||++++... |..++..|. ..|+|+++|+||||.|+.+
T Consensus 79 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~ 134 (397)
T 3h2g_A 79 YPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYA 134 (397)
T ss_dssp EEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCS
T ss_pred CcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 5788999999998665 556777775 5699999999999999643
No 319
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=96.10 E-value=0.0075 Score=68.64 Aligned_cols=62 Identities=8% Similarity=-0.044 Sum_probs=42.5
Q ss_pred EEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 914 LNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 914 ~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+.+...++...++.. .+.+. .|+||++||++++.. ..+...|++ .|+|+++|++|||.+...
T Consensus 138 ~~~~~~~l~~~l~~P-~~~~~---~P~Vv~~hG~~~~~~--~~~a~~La~~Gy~V~a~D~rG~g~~~~~ 200 (422)
T 3k2i_A 138 QSVRAGRVRATLFLP-PGPGP---FPGIIDIFGIGGGLL--EYRASLLAGHGFATLALAYYNFEDLPNN 200 (422)
T ss_dssp EEEEETTEEEEEEEC-SSSCC---BCEEEEECCTTCSCC--CHHHHHHHTTTCEEEEEECSSSTTSCSS
T ss_pred EEEeCCcEEEEEEcC-CCCCC---cCEEEEEcCCCcchh--HHHHHHHHhCCCEEEEEccCCCCCCCCC
Confidence 344555555544433 33322 689999999988744 445777865 499999999999987653
No 320
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=96.07 E-value=0.0058 Score=68.57 Aligned_cols=41 Identities=24% Similarity=0.332 Sum_probs=35.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhh-CCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVS-GSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~-~~~~vi~~Dl~G~G~S 978 (983)
.|+||++||++++...|......|. .+|.|+++|+||||.|
T Consensus 152 ~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s 193 (386)
T 2jbw_A 152 HPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEM 193 (386)
T ss_dssp EEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGG
T ss_pred CCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCC
Confidence 6899999999999887666666664 5699999999999998
No 321
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=96.04 E-value=0.0082 Score=65.70 Aligned_cols=42 Identities=17% Similarity=0.069 Sum_probs=34.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++++...|.........+|.|+++|+||+|.|.
T Consensus 95 ~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~ 136 (337)
T 1vlq_A 95 LPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGW 136 (337)
T ss_dssp EEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSS
T ss_pred ccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcc
Confidence 588999999999877766555555678999999999999764
No 322
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=96.03 E-value=0.0067 Score=61.95 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=31.0
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEE
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISI 970 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~ 970 (983)
+|+|||+||++++...|..+.+.|.+ .|+|+++
T Consensus 23 ~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~ 56 (232)
T 1fj2_A 23 TAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICP 56 (232)
T ss_dssp SEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEEC
T ss_pred CceEEEEecCCCccchHHHHHHHHhcCCcEEEec
Confidence 68999999999999999999999986 7999998
No 323
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=96.01 E-value=0.013 Score=61.98 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=35.8
Q ss_pred CceEEEeCCCCCChhhHHHH---HHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPI---MKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~---~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|+|||+||++++...|... ...+.+ .|.|+++|+||||.|..
T Consensus 44 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~ 90 (278)
T 3e4d_A 44 CPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVP 90 (278)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSC
T ss_pred CCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccc
Confidence 58999999999999999884 344444 69999999999998854
No 324
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=95.98 E-value=0.0089 Score=63.14 Aligned_cols=43 Identities=9% Similarity=0.001 Sum_probs=36.3
Q ss_pred CceEEEeCC---CCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHG---FLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG---~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|.|||+|| ..++...|..+...|.+ .|.|+++|+||||.|..
T Consensus 43 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 89 (276)
T 3hxk_A 43 FPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN 89 (276)
T ss_dssp BCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC
T ss_pred CCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC
Confidence 689999999 34667788999888864 59999999999999753
No 325
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=95.93 E-value=0.018 Score=64.56 Aligned_cols=121 Identities=13% Similarity=0.121 Sum_probs=82.5
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccC---------C----------CChHH----HHHHHHHHHHHcCCC-cEEEEEcC---
Q 041113 657 VEVASIATTLVEEGFTAIKLKVAR---------R----------ADPIK----DAEVIQEVRKKVGHR-IELRVDAN--- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~---------~----------~~~~~----d~~~v~~vr~~~g~~-~~l~vDaN--- 709 (983)
+++++.++.+++.||..|.|+.+. + .+++. -++.|++||+++|++ +-+++-++
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~ 250 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDH 250 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccccc
Confidence 567777888888999999999863 1 12332 367899999999865 33443332
Q ss_pred ----CCCCHHHHHHHHhhcccCC------Cceeec-----------CC-----C--ChHHHHHHHhhcCCcEEeCCCccC
Q 041113 710 ----RNWTYQEALEFGFLIKDCD------LQYIEE-----------PV-----Q--NEEDIIKYCEESGLPVALDETIDK 761 (983)
Q Consensus 710 ----~~~~~~~a~~~~~~l~~~~------i~~iEe-----------P~-----~--~~~~~~~l~~~~~ipIa~dEs~~~ 761 (983)
.+++.++++++++.|++.+ +.||+- |. . +++-.+++++..++||.+...+ +
T Consensus 251 ~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~ 329 (402)
T 2hsa_B 251 LDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-T 329 (402)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-C
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-C
Confidence 3467789999999999998 888764 21 0 1222456788888998888777 6
Q ss_pred cCCChHHHHHhhcCCC-ceEEEE
Q 041113 762 FQKDPLNMLEKYAHPG-IVAIVI 783 (983)
Q Consensus 762 ~~~~~~~~~~~~~~~~-~~~i~~ 783 (983)
.. ....+++.+ +|.|.+
T Consensus 330 ~~-----~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 330 RE-----LGIEAVAQGDADLVSY 347 (402)
T ss_dssp HH-----HHHHHHHTTSCSEEEE
T ss_pred HH-----HHHHHHHCCCCceeee
Confidence 43 344455444 787664
No 326
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=95.82 E-value=0.022 Score=62.06 Aligned_cols=44 Identities=23% Similarity=0.289 Sum_probs=38.9
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
+|.|||+||.+ ++...|..+...|+. +|.|+++|+|+.+.+..+
T Consensus 87 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~ 135 (326)
T 3ga7_A 87 QATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYP 135 (326)
T ss_dssp SCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTT
T ss_pred CcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCC
Confidence 68999999999 899999999999987 799999999998776543
No 327
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=95.78 E-value=0.0076 Score=65.70 Aligned_cols=39 Identities=21% Similarity=0.389 Sum_probs=36.8
Q ss_pred eEEEeCC--CCCChhhHHHHHHHhhCCCEEEEEcCCCCCCC
Q 041113 940 ILLFLHG--FLGTGEEWIPIMKAVSGSARCISIDLPGHGGS 978 (983)
Q Consensus 940 ~lv~lHG--~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~S 978 (983)
+|+|+|| ++++...|..+...|..+|+|+++|+||||.|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~ 131 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTG 131 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCC
Confidence 9999998 67888999999999998999999999999997
No 328
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=95.76 E-value=0.013 Score=65.20 Aligned_cols=42 Identities=12% Similarity=0.037 Sum_probs=36.4
Q ss_pred CceEEEeCCCC---CChh--hHHHHHHHhh-CCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGE--EWIPIMKAVS-GSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~--~w~~~~~~l~-~~~~vi~~Dl~G~G~S~ 979 (983)
.|+|||+||.+ ++.. .|..+...|+ .+|.|+++|+||+|.|+
T Consensus 109 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~ 156 (361)
T 1jkm_A 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE 156 (361)
T ss_dssp EEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT
T ss_pred CeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 58999999988 7888 8999999997 67999999999996543
No 329
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=95.72 E-value=0.0064 Score=63.75 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=36.3
Q ss_pred CceEEEeCCC---CCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGF---LGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~---~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
+|+|||+||. +++...|..+.+.|.+. |+|+++|+||+|..+
T Consensus 63 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~ 108 (262)
T 2pbl_A 63 VGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR 108 (262)
T ss_dssp SEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC
T ss_pred CCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 7899999994 48889999999999654 999999999998653
No 330
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=95.69 E-value=0.012 Score=63.53 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=31.6
Q ss_pred CceEEEeCCCCCChhhH-HHHHHHhhC-CCEEEEEcCC
Q 041113 938 DNILLFLHGFLGTGEEW-IPIMKAVSG-SARCISIDLP 973 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w-~~~~~~l~~-~~~vi~~Dl~ 973 (983)
.|+|||+||++.+...| ..+.+.|.+ .|.|+++|+|
T Consensus 54 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 91 (304)
T 3d0k_A 54 RPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFS 91 (304)
T ss_dssp SCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECC
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCc
Confidence 68999999999999988 666777764 5999999999
No 331
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=95.68 E-value=0.013 Score=61.78 Aligned_cols=43 Identities=12% Similarity=0.193 Sum_probs=36.4
Q ss_pred CceEEEeCCCC-----CChhhHHHHHHHh-----hCCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFL-----GTGEEWIPIMKAV-----SGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~-----~~~~~w~~~~~~l-----~~~~~vi~~Dl~G~G~S~~ 980 (983)
.|+|||+||.+ ++...|..+++.| ..+|+|+++|+|+.+.+..
T Consensus 41 ~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~ 93 (273)
T 1vkh_A 41 REAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN 93 (273)
T ss_dssp CEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT
T ss_pred CeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC
Confidence 68999999954 4678999999999 5679999999999887543
No 332
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=95.57 E-value=0.0023 Score=70.38 Aligned_cols=44 Identities=7% Similarity=0.142 Sum_probs=37.4
Q ss_pred CceEEEeCCCCCC----------hhhH----HHHHHHhhC-CCE---EEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGT----------GEEW----IPIMKAVSG-SAR---CISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~----------~~~w----~~~~~~l~~-~~~---vi~~Dl~G~G~S~~~ 981 (983)
++||||+||++++ ...| ..+++.|.+ .|+ |+++|+||||.|+.+
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~ 101 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSA 101 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCG
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCc
Confidence 6799999999994 5689 899999876 487 999999999987643
No 333
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=95.50 E-value=0.0083 Score=67.26 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=38.5
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC-CEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS-ARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~-~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++++...|..+.+.|++. |.|+++|+||+|.|.
T Consensus 98 ~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~ 140 (383)
T 3d59_A 98 YPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASA 140 (383)
T ss_dssp EEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSE
T ss_pred CCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccc
Confidence 578999999999999999999999775 999999999999874
No 334
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=95.46 E-value=0.0065 Score=61.88 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=35.9
Q ss_pred CCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCC
Q 041113 937 QDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGG 977 (983)
Q Consensus 937 ~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~ 977 (983)
.++.||||||+|++...|..+.+.|.. .+.|++||.+|++.
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w 62 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSW 62 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCc
Confidence 367899999999999999999888864 59999999999763
No 335
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=95.45 E-value=0.033 Score=60.92 Aligned_cols=73 Identities=11% Similarity=0.076 Sum_probs=46.5
Q ss_pred eeEEEEEEcc-cCceeEEEEeecCCccCCCCceEEEeCCCCC---Ch--hhHHHHHHHhh--CCCEEEEEcCCCCCCCCC
Q 041113 909 VLRYQLNVNS-KDFCSFIKVQEIGQRIDIQDNILLFLHGFLG---TG--EEWIPIMKAVS--GSARCISIDLPGHGGSKM 980 (983)
Q Consensus 909 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~---~~--~~w~~~~~~l~--~~~~vi~~Dl~G~G~S~~ 980 (983)
+..+.+.+.. .++.++++............|+|||+||.+. +. ..|..++..|+ .+|.|+++|+||++.+..
T Consensus 53 v~~~~v~~~~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~ 132 (338)
T 2o7r_A 53 VLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRL 132 (338)
T ss_dssp EEEEEEEEETTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCT
T ss_pred EEEEEEEecCCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCC
Confidence 4455555543 3455555444322000012588999999772 22 34899999886 469999999999998764
Q ss_pred C
Q 041113 981 Q 981 (983)
Q Consensus 981 ~ 981 (983)
+
T Consensus 133 ~ 133 (338)
T 2o7r_A 133 P 133 (338)
T ss_dssp T
T ss_pred c
Confidence 3
No 336
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=95.42 E-value=0.013 Score=61.31 Aligned_cols=38 Identities=5% Similarity=0.092 Sum_probs=34.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGH 975 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~ 975 (983)
.|.|||+||++++...|..+.+.|++ .|+|+++|+||.
T Consensus 49 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s 87 (258)
T 2fx5_A 49 HPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNA 87 (258)
T ss_dssp EEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCC
T ss_pred ceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCC
Confidence 58899999999999999999999976 599999999974
No 337
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=95.27 E-value=0.02 Score=61.53 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=35.5
Q ss_pred CceEEEeCC---CCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHG---FLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG---~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+|| ..++...|..+...|.+ .|.|+++|+||+|.+.
T Consensus 82 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~ 127 (303)
T 4e15_A 82 APLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT 127 (303)
T ss_dssp CCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC
T ss_pred CCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC
Confidence 789999999 55777888888887765 5999999999999864
No 338
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=95.26 E-value=0.041 Score=59.82 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=37.8
Q ss_pred Cce-EEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNI-LLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~-lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
+++ |||+||.+ ++...|..+...|.. .|.|+++|+|+++.+..+
T Consensus 79 ~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~ 128 (322)
T 3k6k_A 79 GAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFP 128 (322)
T ss_dssp CSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTT
T ss_pred CCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc
Confidence 577 99999966 888999999998875 799999999999887543
No 339
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=95.13 E-value=0.028 Score=63.16 Aligned_cols=44 Identities=14% Similarity=0.040 Sum_probs=35.5
Q ss_pred CceEEEeCCCCCChhhH--------------H----HHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEW--------------I----PIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w--------------~----~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
.|.||++||++++...+ + .+...|++ .|.|+++|+||||.|..+
T Consensus 114 ~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~ 176 (391)
T 3g8y_A 114 VPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDL 176 (391)
T ss_dssp EEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSS
T ss_pred CCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCc
Confidence 58999999999987643 2 45677765 499999999999998753
No 340
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=95.13 E-value=0.021 Score=60.97 Aligned_cols=37 Identities=11% Similarity=0.215 Sum_probs=34.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPGHG 976 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G 976 (983)
+++|||+||+++++..|..+.+.|+ ++|+++|++|..
T Consensus 24 ~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~ 60 (283)
T 3tjm_A 24 ERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAA 60 (283)
T ss_dssp SCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTS
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCC
Confidence 7899999999999999999999997 999999998743
No 341
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=94.98 E-value=0.041 Score=62.97 Aligned_cols=62 Identities=8% Similarity=-0.074 Sum_probs=42.6
Q ss_pred EEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC-CCEEEEEcCCCCCCCCCC
Q 041113 914 LNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG-SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 914 ~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~S~~~ 981 (983)
+.+...++...++.. .+.+. .|.||++||++++...| ....|++ .|+|+++|+||||.+..+
T Consensus 154 ~~~~~g~l~~~l~~P-~~~~~---~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~ 216 (446)
T 3hlk_A 154 EPVRVGRVRGTLFLP-PEPGP---FPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKT 216 (446)
T ss_dssp EEEEETTEEEEEEEC-SSSCC---BCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSC
T ss_pred EEecCCeEEEEEEeC-CCCCC---CCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcc
Confidence 344455555544433 33322 68999999999875444 3677765 599999999999988754
No 342
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=94.94 E-value=0.05 Score=61.25 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=35.3
Q ss_pred CceEEEeCCCCCChhhHH------------------HHHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWI------------------PIMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~------------------~~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|.||++||++++...+. .+...|++ .|.|+++|+||||.|..
T Consensus 119 ~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~ 180 (398)
T 3nuz_A 119 VPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASD 180 (398)
T ss_dssp EEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCS
T ss_pred ccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 589999999999877543 46677765 49999999999999863
No 343
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=94.85 E-value=0.055 Score=58.90 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=34.5
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S 978 (983)
+|+|||+||.+ ++...|..++..|+. +|+|+++|+||.+..
T Consensus 96 ~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~ 141 (326)
T 3d7r_A 96 DKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEF 141 (326)
T ss_dssp SSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTS
T ss_pred CeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCC
Confidence 68999999944 577889999988864 699999999997764
No 344
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=94.72 E-value=0.089 Score=57.85 Aligned_cols=44 Identities=11% Similarity=0.173 Sum_probs=35.1
Q ss_pred CceEEEeCCCCC---Chh--hHHHHHHHhh--CCCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFLG---TGE--EWIPIMKAVS--GSARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~~---~~~--~w~~~~~~l~--~~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||.+. +.. .|..+...|+ .+|.|+++|+||++.+..+
T Consensus 113 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~ 163 (351)
T 2zsh_A 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYP 163 (351)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred ceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCc
Confidence 689999999553 333 4899999997 4699999999999887543
No 345
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=94.69 E-value=0.078 Score=57.62 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=37.1
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKMQ 981 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~~ 981 (983)
.|+|||+||.+ ++...|..+...|.. .|.|+++|+|+.+.+..+
T Consensus 80 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~ 128 (322)
T 3fak_A 80 GKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFP 128 (322)
T ss_dssp TCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred ccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC
Confidence 68999999966 788899999888865 799999999998776543
No 346
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=94.67 E-value=0.03 Score=57.41 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=33.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCC------CEEEEEcCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGS------ARCISIDLPGH 975 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~------~~vi~~Dl~G~ 975 (983)
.|+|||+||++++...|..+...|... |+|+++|.|++
T Consensus 23 ~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~ 66 (239)
T 3u0v_A 23 SASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPR 66 (239)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEE
T ss_pred CcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCcc
Confidence 689999999999999999999988754 99999998754
No 347
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=94.45 E-value=0.048 Score=58.25 Aligned_cols=97 Identities=19% Similarity=0.165 Sum_probs=77.3
Q ss_pred CHHHHHHHHhhcccCCCceeecCCCC---hHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcC
Q 041113 713 TYQEALEFGFLIKDCDLQYIEEPVQN---EEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIG 789 (983)
Q Consensus 713 ~~~~a~~~~~~l~~~~i~~iEeP~~~---~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~G 789 (983)
+.+..++-.+.|++.|-+.+.-.+++ .+.+..+++++++||.+|-++.. +.+...++.|+|.+.++|+-+|
T Consensus 44 D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlvaDiHf~~------~lal~a~e~G~dklRINPGNig 117 (366)
T 3noy_A 44 DVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHFAP------SYAFLSMEKGVHGIRINPGNIG 117 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEEEECCSCH------HHHHHHHHTTCSEEEECHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEEEeCCCCH------HHHHHHHHhCCCeEEECCcccC
Confidence 66677777777777888888888874 34567788899999999987543 2344556678999999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEEeCCCCc
Q 041113 790 GFENAGLIARWAQRHGKMAVVSAAFE 815 (983)
Q Consensus 790 Gl~~~~~~~~~A~~~gi~~~~~~~~e 815 (983)
+-....++++.|+++|+++.++-+++
T Consensus 118 ~~~~~~~vv~~ak~~~~piRIGvN~G 143 (366)
T 3noy_A 118 KEEIVREIVEEAKRRGVAVRIGVNSG 143 (366)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred chhHHHHHHHHHHHcCCCEEEecCCc
Confidence 99999999999999999998874443
No 348
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=94.30 E-value=0.062 Score=56.82 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=33.9
Q ss_pred CceEEEeCCCC---CChhhH-HHHHHHhhCC-CEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEW-IPIMKAVSGS-ARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w-~~~~~~l~~~-~~vi~~Dl~G~G~S 978 (983)
+|+|||+||.| ++...| ..+...+.+. |+|+++|+|+...+
T Consensus 27 ~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~ 72 (274)
T 2qru_A 27 TNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT 72 (274)
T ss_dssp CEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS
T ss_pred CcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC
Confidence 68999999988 677766 6677778764 99999999998765
No 349
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=94.28 E-value=0.085 Score=55.46 Aligned_cols=41 Identities=22% Similarity=0.227 Sum_probs=32.9
Q ss_pred CceEEEeCCCCCChhhHHHH---HHHhh-CCCEEEEEcC--CCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPI---MKAVS-GSARCISIDL--PGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~---~~~l~-~~~~vi~~Dl--~G~G~S 978 (983)
.|.|||+||++++...|... ...+. ..|.|+++|. ||+|.+
T Consensus 45 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~ 91 (282)
T 3fcx_A 45 CPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91 (282)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC-
T ss_pred CCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccc
Confidence 58899999999999999876 45554 4699999999 766653
No 350
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.13 E-value=0.071 Score=57.92 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=95.2
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCC--------------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHH
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRA--------------DPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEAL 718 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~--------------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~ 718 (983)
+.+++.+.+.++.+.+. |..|-|.+|.+. +++.-.+.++++|++++ +.+.+.-..+|+.++..
T Consensus 67 g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~G~~~~~~~ 143 (318)
T 1vhn_A 67 GSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS--GKFSVKTRLGWEKNEVE 143 (318)
T ss_dssp CSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS--SEEEEEEESCSSSCCHH
T ss_pred CCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC--CCEEEEecCCCChHHHH
Confidence 45789999999998888 999999988641 23445678999999985 67777777788776666
Q ss_pred HHHhhcccCCCcee-------ecC---CCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcC-CCceEEEEcCCC
Q 041113 719 EFGFLIKDCDLQYI-------EEP---VQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAH-PGIVAIVIKPSV 787 (983)
Q Consensus 719 ~~~~~l~~~~i~~i-------EeP---~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~ 787 (983)
++++.+++.++.+| ++- .++++-++++++ ++||.++-.+.+..| ...+++ .|+|.+.+=-..
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~d-----a~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPED-----AKRALEESGCDGLLVARGA 216 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHH-----HHHHHHHHCCSEEEESGGG
T ss_pred HHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHH-----HHHHHHcCCCCEEEECHHH
Confidence 88899999888877 331 124555566666 899999888887653 444444 578888875444
Q ss_pred cCCHHHHHHH
Q 041113 788 IGGFENAGLI 797 (983)
Q Consensus 788 ~GGl~~~~~~ 797 (983)
+....-..++
T Consensus 217 l~~P~l~~~~ 226 (318)
T 1vhn_A 217 IGRPWIFKQI 226 (318)
T ss_dssp TTCTTHHHHH
T ss_pred HhCcchHHHH
Confidence 4444433333
No 351
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=93.90 E-value=0.28 Score=55.10 Aligned_cols=77 Identities=21% Similarity=0.349 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CCh-HH----HHHHHHHHHHHc----CCCcEEEEEc
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADP-IK----DAEVIQEVRKKV----GHRIELRVDA 708 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~-~~----d~~~v~~vr~~~----g~~~~l~vDa 708 (983)
+++.+.++.+++.||..|-|+.+.+ .+. +. =++.|++||+++ |+++.+.+=-
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRi 249 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRA 249 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEec
Confidence 3455666777789999999998641 123 22 257889999998 6776554432
Q ss_pred CC--------CCCHHHHHHHHhhccc-CCCceee
Q 041113 709 NR--------NWTYQEALEFGFLIKD-CDLQYIE 733 (983)
Q Consensus 709 N~--------~~~~~~a~~~~~~l~~-~~i~~iE 733 (983)
+. +|+.++++++++.|++ .++.||+
T Consensus 250 s~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~ 283 (419)
T 3l5a_A 250 TPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLA 283 (419)
T ss_dssp CSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEE
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Confidence 22 7999999999999999 8888876
No 352
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=93.77 E-value=0.12 Score=55.96 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=36.2
Q ss_pred CceEEEeCCCC---CChhhHHHHHHHhhC--CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFL---GTGEEWIPIMKAVSG--SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~---~~~~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~~ 980 (983)
.|.|||+||.| ++...|..++..|.. +|.|+++|+|+.+.+..
T Consensus 85 ~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~ 132 (317)
T 3qh4_A 85 APVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPY 132 (317)
T ss_dssp EEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT
T ss_pred CcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 68999999877 677889998888863 69999999998877654
No 353
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.52 E-value=0.043 Score=64.98 Aligned_cols=41 Identities=12% Similarity=0.285 Sum_probs=35.1
Q ss_pred CceEEEeCCCCCC--hhhHHHHHHHhhCC-CEEEEEcCCC---CCCC
Q 041113 938 DNILLFLHGFLGT--GEEWIPIMKAVSGS-ARCISIDLPG---HGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~--~~~w~~~~~~l~~~-~~vi~~Dl~G---~G~S 978 (983)
.|.|||+||.+.+ ...|..+...|++. |.|+++|+|| ||+|
T Consensus 360 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s 406 (582)
T 3o4h_A 360 GPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEE 406 (582)
T ss_dssp EEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred CcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchh
Confidence 6899999998776 78899999988655 9999999999 6654
No 354
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.48 E-value=0.67 Score=50.81 Aligned_cols=125 Identities=12% Similarity=0.155 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCC--------------ChHHHHHHHHHHHHHcCCCcEE--EEEcCCCCCHHH
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRA--------------DPIKDAEVIQEVRKKVGHRIEL--RVDANRNWTYQE 716 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~--------------~~~~d~~~v~~vr~~~g~~~~l--~vDaN~~~~~~~ 716 (983)
+.+++.+.+.++.+.+.||..|-|.+|.+. +++.-.+.|+++|++++-.+.+ ++......+.++
T Consensus 66 g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~ 145 (350)
T 3b0p_A 66 GSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRG 145 (350)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHH
Confidence 357899999998888899999999987531 1233356788899887533333 333333345678
Q ss_pred HHHHHhhcccCCCceeec-----------------CCCChHHHHHHHhhc-CCcEEeCCCccCcCCChHHHHHhhcCCCc
Q 041113 717 ALEFGFLIKDCDLQYIEE-----------------PVQNEEDIIKYCEES-GLPVALDETIDKFQKDPLNMLEKYAHPGI 778 (983)
Q Consensus 717 a~~~~~~l~~~~i~~iEe-----------------P~~~~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~~~~~~~~ 778 (983)
..++++.+++.++.+|-= |-.+++-++++++.. ++||.+.=.+.+..+ ...+++ |+
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~ed-----a~~~l~-Ga 219 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEE-----ALFHLK-RV 219 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHH-----HHHHHT-TS
T ss_pred HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHH-----HHHHHh-CC
Confidence 889999998887765420 111466678888888 899998887777643 455555 78
Q ss_pred eEEEE
Q 041113 779 VAIVI 783 (983)
Q Consensus 779 ~~i~~ 783 (983)
|.+.+
T Consensus 220 D~V~i 224 (350)
T 3b0p_A 220 DGVML 224 (350)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 88876
No 355
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=93.46 E-value=0.082 Score=60.07 Aligned_cols=43 Identities=21% Similarity=0.081 Sum_probs=31.8
Q ss_pred CceEEEeCCCCCChhhHH---HHHHHhhC--CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWI---PIMKAVSG--SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~---~~~~~l~~--~~~vi~~Dl~G~G~S~~ 980 (983)
+.||||+||..++...+. .....|++ +++||++|+||||+|..
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p 85 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLP 85 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCT
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCC
Confidence 457999999998876432 23444544 36999999999999964
No 356
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.43 E-value=0.39 Score=52.49 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCCC--------ChHHHHHHHHHHHHHc-------CCCcEEEEEcCCCCCHHHHHHH
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARRA--------DPIKDAEVIQEVRKKV-------GHRIELRVDANRNWTYQEALEF 720 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~~--------~~~~d~~~v~~vr~~~-------g~~~~l~vDaN~~~~~~~a~~~ 720 (983)
++++.+.++.+.+ ||..+-+.++.+. +++.-.+.+++||+.+ |+++.+.|=-+..|+.++..++
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 7788887777655 9999999887531 1222356788888887 6688888888888999999999
Q ss_pred HhhcccCCCceeec-------------CC-------C-------ChHHHHHHHhhc--CCcEEeCCCccCcCCChHHHHH
Q 041113 721 GFLIKDCDLQYIEE-------------PV-------Q-------NEEDIIKYCEES--GLPVALDETIDKFQKDPLNMLE 771 (983)
Q Consensus 721 ~~~l~~~~i~~iEe-------------P~-------~-------~~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~~~~ 771 (983)
++.+++.++.+|.= |. . ..+..+++++.. ++||.+.=-+.+..| ..
T Consensus 231 a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~d-----a~ 305 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIA-----AR 305 (336)
T ss_dssp HHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHH-----HH
T ss_pred HHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH-----HH
Confidence 99999888776651 00 0 023345666666 788887777776543 33
Q ss_pred hhcCCCceEEEEc
Q 041113 772 KYAHPGIVAIVIK 784 (983)
Q Consensus 772 ~~~~~~~~~i~~k 784 (983)
++++.|+|.|++-
T Consensus 306 ~~l~~GAd~V~ig 318 (336)
T 1f76_A 306 EKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHCCCCEEEee
Confidence 4444578877754
No 357
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=93.40 E-value=0.14 Score=53.91 Aligned_cols=42 Identities=14% Similarity=0.268 Sum_probs=33.4
Q ss_pred CceEEEeCCCCCChhhHHHH---HHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPI---MKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~---~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++++...|... ...+.+ .+.|+++|.+|+|.+.
T Consensus 47 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~ 92 (280)
T 3i6y_A 47 VPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGV 92 (280)
T ss_dssp EEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTC
T ss_pred ccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCccccccc
Confidence 58999999999999999874 333433 5999999999887653
No 358
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=93.22 E-value=0.21 Score=51.69 Aligned_cols=43 Identities=14% Similarity=0.249 Sum_probs=34.6
Q ss_pred CceEEEeCCCCCChhhHHH--HHHHhhC--CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP--IMKAVSG--SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~--~~~~l~~--~~~vi~~Dl~G~G~S~~ 980 (983)
.|.|||+||++++...|.. .+..+.+ .+.|+++|.++++.++.
T Consensus 41 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 87 (263)
T 2uz0_A 41 IPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDT 87 (263)
T ss_dssp BCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBC
T ss_pred CCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccC
Confidence 6899999999999999998 5666654 47788888888877654
No 359
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=93.04 E-value=0.31 Score=52.59 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=56.5
Q ss_pred cccCCCCEEEEeCCccccHHHHHHHHhcCC-ceEEEEcCCCCCCCCC------------------CCeeEEEEcCHHHHH
Q 041113 156 KDWIQFDVIIQIGSRITSKRISQMIEECFP-CTYILVDNHPCRHDPS------------------HSVTHRIQSTIVQFV 216 (983)
Q Consensus 156 ~~~~~aDlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~------------------~~~~~~i~~d~~~~l 216 (983)
..+.+||++|++|+++.-.....+...... ..++.|+.++...... ...++.|.+|+..++
T Consensus 216 ~~~~~aDlllviGTSl~V~P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l 295 (323)
T 1j8f_A 216 SDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGC 295 (323)
T ss_dssp HGGGSCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHH
T ss_pred HHHhCCCEEEEEeeCcccHHHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHH
Confidence 356799999999999987766655544433 3456788887655432 336889999999999
Q ss_pred HHHHhccCCCCChhHHHHHHHHHH
Q 041113 217 DFLLKVQVPHRSSKWCSFLRALDM 240 (983)
Q Consensus 217 ~~L~~~~~~~~~~~w~~~~~~~~~ 240 (983)
..|.+.+ .|.+.+.+...
T Consensus 296 ~~L~~~l------gw~~~l~~l~~ 313 (323)
T 1j8f_A 296 LALAELL------GWKKELEDLVR 313 (323)
T ss_dssp HHHHHHT------TCHHHHHHHHH
T ss_pred HHHHHHc------CCchHHHHHHH
Confidence 9998876 36666655444
No 360
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=93.00 E-value=0.17 Score=53.26 Aligned_cols=41 Identities=20% Similarity=0.350 Sum_probs=33.0
Q ss_pred CceEEEeCCCCCChhhHHH---HHHHhhC-CCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP---IMKAVSG-SARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~---~~~~l~~-~~~vi~~Dl~G~G~S 978 (983)
.|.|||+||++++...|.. +...+.+ .+.|+++|.+|+|.+
T Consensus 45 ~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~ 89 (280)
T 3ls2_A 45 VPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDN 89 (280)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTT
T ss_pred cCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccc
Confidence 5899999999999999976 3344433 699999999987765
No 361
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.91 E-value=0.37 Score=51.95 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=88.0
Q ss_pred CCCHHHHHHHHHHhhhcCCC-EEEEeccCCC---------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHh
Q 041113 653 NKSPVEVASIATTLVEEGFT-AIKLKVARRA---------DPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGF 722 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~-~~KiKig~~~---------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~ 722 (983)
..+++++.+.++.+.+.||. .+-+.++.+. +++.-.+.++++|+++ ++.+.+=-+..|+.++..++++
T Consensus 102 g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~~~~~~~a~ 179 (311)
T 1jub_A 102 GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDLVHFDIMAE 179 (311)
T ss_dssp CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHH
Confidence 45788999999999999999 9999886321 3444467788888876 3445544455578889989999
Q ss_pred hcccCCCceee----------------cCC---------------C--ChHHHHHHHhhc--CCcEEeCCCccCcCCChH
Q 041113 723 LIKDCDLQYIE----------------EPV---------------Q--NEEDIIKYCEES--GLPVALDETIDKFQKDPL 767 (983)
Q Consensus 723 ~l~~~~i~~iE----------------eP~---------------~--~~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~ 767 (983)
.+++.++.+|- .|. . .++..+++++.. .+||.+.=-+.+..|
T Consensus 180 ~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~d--- 256 (311)
T 1jub_A 180 ILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQD--- 256 (311)
T ss_dssp HHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHH---
T ss_pred HHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHH---
Confidence 99998877642 111 0 134456777777 789888877777643
Q ss_pred HHHHhhcCCCceEEEEcCCCc
Q 041113 768 NMLEKYAHPGIVAIVIKPSVI 788 (983)
Q Consensus 768 ~~~~~~~~~~~~~i~~k~~~~ 788 (983)
..+++..|+|.+++--..+
T Consensus 257 --a~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 257 --AFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp --HHHHHHHTCSEEEECHHHH
T ss_pred --HHHHHHcCCCEEEEchHHH
Confidence 3333445788887654433
No 362
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.89 E-value=0.47 Score=57.71 Aligned_cols=122 Identities=14% Similarity=0.056 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCCcEE--EEEc--
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHRIEL--RVDA-- 708 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~~~l--~vDa-- 708 (983)
.+++.+.++.+++.||..+.|+.+.+ .+.+. -++.+++||+++|+++.+ ++-+
T Consensus 148 i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 148 QQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 35667777778889999999998651 12222 267899999999988643 3333
Q ss_pred ---CCCCC-HHHHHHHHhhcccCCCcee-----------ecCCC--------ChHHHHHHHhhcCCcEEeCCCccCcCCC
Q 041113 709 ---NRNWT-YQEALEFGFLIKDCDLQYI-----------EEPVQ--------NEEDIIKYCEESGLPVALDETIDKFQKD 765 (983)
Q Consensus 709 ---N~~~~-~~~a~~~~~~l~~~~i~~i-----------EeP~~--------~~~~~~~l~~~~~ipIa~dEs~~~~~~~ 765 (983)
.++|+ .++++++++.|++. +.++ +...+ +.+-.+++++..++||.+.-.+.+..+
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~~-~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~- 305 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADSL-VDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEK- 305 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGGG-CSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHH-
T ss_pred CcCCCCCCchHHHHHHHHHHHhh-cCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHH-
Confidence 25788 67888899888763 3322 21111 234456788999999999988877643
Q ss_pred hHHHHHhhcCCC-ceEEEE
Q 041113 766 PLNMLEKYAHPG-IVAIVI 783 (983)
Q Consensus 766 ~~~~~~~~~~~~-~~~i~~ 783 (983)
...+++.+ +|.|.+
T Consensus 306 ----a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 306 ----MIEIVTKGYADIIGC 320 (729)
T ss_dssp ----HHHHHHTTSCSBEEE
T ss_pred ----HHHHHHCCCCCEEEe
Confidence 44445444 777664
No 363
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.85 E-value=0.35 Score=58.48 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=82.8
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCCC--------------------ChHH----HHHHHHHHHHHcCCC--cEEEEEcC-
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARRA--------------------DPIK----DAEVIQEVRKKVGHR--IELRVDAN- 709 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~~--------------------~~~~----d~~~v~~vr~~~g~~--~~l~vDaN- 709 (983)
+++.+.++.+++.||..+-|+.+.+. +++. -.+.+++||+++|++ +.+++-++
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~ 235 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE 235 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc
Confidence 56667777788899999999875321 2332 257899999999988 45666554
Q ss_pred ---CCCCHHHHHHHHhhcccCCCceee-------c----CC--C---ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHH
Q 041113 710 ---RNWTYQEALEFGFLIKDCDLQYIE-------E----PV--Q---NEEDIIKYCEESGLPVALDETIDKFQKDPLNML 770 (983)
Q Consensus 710 ---~~~~~~~a~~~~~~l~~~~i~~iE-------e----P~--~---~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~ 770 (983)
++|+.+++.++++.|++ ++.+++ + |. + ..+..+++++..++||.+--.+.+.. ..
T Consensus 236 ~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~-----~a 309 (690)
T 3k30_A 236 EIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPD-----AM 309 (690)
T ss_dssp CSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHH-----HH
T ss_pred cCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHH-----HH
Confidence 57899999999999988 455542 1 11 1 12344567888899999887777653 24
Q ss_pred HhhcCCC-ceEEEE
Q 041113 771 EKYAHPG-IVAIVI 783 (983)
Q Consensus 771 ~~~~~~~-~~~i~~ 783 (983)
..+++.+ +|.|.+
T Consensus 310 ~~~l~~g~~d~v~~ 323 (690)
T 3k30_A 310 VRQIKAGILDLIGA 323 (690)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHCCCcceEEE
Confidence 4444444 788764
No 364
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=92.82 E-value=0.062 Score=52.99 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=31.4
Q ss_pred CceEEEeCCCCCCh-hhHHHHHHHhhCCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-EEWIPIMKAVSGSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-~~w~~~~~~l~~~~~vi~~Dl~G~G~S 978 (983)
+|+|||+||++++. ..|..+...+.. .++.+|+||++..
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~ 56 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQA 56 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSSC
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCCc
Confidence 78999999999988 789888776433 4577899998754
No 365
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.52 E-value=0.25 Score=53.48 Aligned_cols=131 Identities=10% Similarity=0.023 Sum_probs=87.1
Q ss_pred EEEEeecCCCCHHHHHHHHHHhhhcCCC---EEEEeccCCC---------ChHHHHHHHHHHHHHcCCCcEEEEEcCCCC
Q 041113 645 KICALIDSNKSPVEVASIATTLVEEGFT---AIKLKVARRA---------DPIKDAEVIQEVRKKVGHRIELRVDANRNW 712 (983)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~---~~KiKig~~~---------~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~ 712 (983)
|+..++ ...+++++.+.++.+.+.||. .+-+.++.+. +++.-.+.++++|+++ ++.+.+=....|
T Consensus 95 p~~~~i-~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~ 171 (314)
T 2e6f_A 95 PLFLSI-SGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYF 171 (314)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCC
T ss_pred cEEEEe-CCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCC
Confidence 333444 245789999999998889999 8999886421 3444467899999987 355555555568
Q ss_pred CHHHHHHHHhhcccCC-Cceeec----------------CCC-----------------ChHHHHHHHhhc-CCcEEeCC
Q 041113 713 TYQEALEFGFLIKDCD-LQYIEE----------------PVQ-----------------NEEDIIKYCEES-GLPVALDE 757 (983)
Q Consensus 713 ~~~~a~~~~~~l~~~~-i~~iEe----------------P~~-----------------~~~~~~~l~~~~-~ipIa~dE 757 (983)
+.++..++++.+++.+ +.+|-= |.. .++..+++++.. .+||.+.=
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~G 251 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCG 251 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEES
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEEC
Confidence 9999989999998888 776631 110 134445666676 78887777
Q ss_pred CccCcCCChHHHHHhhcCCCceEEEE
Q 041113 758 TIDKFQKDPLNMLEKYAHPGIVAIVI 783 (983)
Q Consensus 758 s~~~~~~~~~~~~~~~~~~~~~~i~~ 783 (983)
-+.+..| ..+++..|+|.+++
T Consensus 252 GI~~~~d-----a~~~l~~GAd~V~i 272 (314)
T 2e6f_A 252 GVYSGED-----AFLHILAGASMVQV 272 (314)
T ss_dssp SCCSHHH-----HHHHHHHTCSSEEE
T ss_pred CCCCHHH-----HHHHHHcCCCEEEE
Confidence 6666543 33333446766665
No 366
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.24 E-value=0.11 Score=63.14 Aligned_cols=43 Identities=9% Similarity=0.173 Sum_probs=33.6
Q ss_pred CceEEEeCCCCCCh---hhHHH----HHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG---EEWIP----IMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~---~~w~~----~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|+|||+||.+.+. ..|.. +...|++ .|+|+++|+||||.|..
T Consensus 485 ~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 485 YPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred ccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 47899999988776 46775 5777754 69999999999998753
No 367
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.09 E-value=0.1 Score=63.58 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=34.4
Q ss_pred CceEEEeCCCCCCh---hhHH-----HHHHHhh-CCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG---EEWI-----PIMKAVS-GSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~---~~w~-----~~~~~l~-~~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++.+. ..|. .+.+.|+ ..|.|+++|+||||.|.
T Consensus 517 ~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~ 567 (741)
T 2ecf_A 517 YPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRG 567 (741)
T ss_dssp EEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred cCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 47899999999875 4565 6777785 46999999999999975
No 368
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=91.95 E-value=0.71 Score=51.19 Aligned_cols=43 Identities=19% Similarity=0.212 Sum_probs=30.8
Q ss_pred CceEEEeCCCCCChh---------hHHHHHHHh-hCCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE---------EWIPIMKAV-SGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~---------~w~~~~~~l-~~~~~vi~~Dl~G~G~S~~ 980 (983)
.|.|++.||+..+.. .|....... .+.|+|+++|+||||.|..
T Consensus 74 ~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~ 126 (377)
T 4ezi_A 74 VGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNEL 126 (377)
T ss_dssp EEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCC
T ss_pred CcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCC
Confidence 578999999985321 233222333 5679999999999999975
No 369
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=91.87 E-value=0.45 Score=51.28 Aligned_cols=116 Identities=12% Similarity=0.007 Sum_probs=76.3
Q ss_pred CceEEEEcc-CCCh-hHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCCCCEE
Q 041113 87 NKGLLLVGA-VHNE-DEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQFDVI 164 (983)
Q Consensus 87 krPvIl~G~-g~~~-~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~aDlv 164 (983)
+-.+|+.|+ |... +..+.+.+||++||+-|-.|-- -+ + .|.+|.+|- +|..| +.+.-|+|-
T Consensus 201 ~A~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaSR~-~v-d---~Gw~~~~~Q----VGqTG--------k~V~P~~lY 263 (320)
T 1o97_D 201 TVDFIMSIGRGIGEETNVEQFRELADEAGATLCCSRP-IA-D---AGWLPKSRQ----VGQSG--------KVVGSCKLY 263 (320)
T ss_dssp CSSEEEEECGGGCSGGGHHHHHHHHHHHTCEEEECHH-HH-H---TTSSCGGGB----BSTTS--------BCCTTCSEE
T ss_pred CCCEEEEcCCccCChHHHHHHHHHHHHhCCceeecHH-HH-h---CCCCChhhE----eecCc--------eEecccceE
Confidence 334666665 5543 3457899999999998866531 11 0 255555442 34433 344556999
Q ss_pred EEeCCccccHHHHHHHHhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 165 IQIGSRITSKRISQMIEECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 165 l~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
|++|-+=.-.++.+.. ..+.+|-||.|++.. -+..+|..|++|+..++.+|.+.+
T Consensus 264 iA~GISGAiQHlaGm~---~s~~IVAIN~D~~Ap-IF~~ADygiVgDl~~vvP~L~~~l 318 (320)
T 1o97_D 264 VAMGISGSIQHMAGMK---HVPTIIAVNTDPGAS-IFTIAKYGIVADIFDIEEELKAQL 318 (320)
T ss_dssp EEESCCCCHHHHHHHT---TCSEEEEECSCTTCG-GGGTCSEEECSCHHHHHHHHHHHC
T ss_pred EEEeccCcHHHHhhcc---cCCEEEEEeCCCCCC-cccccCeEEeeeHHHHHHHHHHHH
Confidence 9999875434444331 234578899998743 245689999999999999999876
No 370
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=91.51 E-value=0.14 Score=54.56 Aligned_cols=36 Identities=19% Similarity=0.548 Sum_probs=30.3
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhC---CCEEEEEcCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSG---SARCISIDLP 973 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~---~~~vi~~Dl~ 973 (983)
.|.||||||+|++...|..+.+.|.. .+.+++|+-|
T Consensus 66 ~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap 104 (285)
T 4fhz_A 66 TSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAP 104 (285)
T ss_dssp SEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCS
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCC
Confidence 57899999999999999998888865 4788888754
No 371
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.15 E-value=0.18 Score=60.51 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=35.5
Q ss_pred CceEEEeCCCCCChh--hHHHHHHHhhCC-CEEEEEcCCC---CCCC
Q 041113 938 DNILLFLHGFLGTGE--EWIPIMKAVSGS-ARCISIDLPG---HGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--~w~~~~~~l~~~-~~vi~~Dl~G---~G~S 978 (983)
.|.|||+||++.+.. .|..+...|.+. |.|+++|+|| ||+|
T Consensus 424 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 424 PPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 578999999988766 788888888765 9999999999 7765
No 372
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=90.95 E-value=0.38 Score=50.23 Aligned_cols=41 Identities=20% Similarity=0.430 Sum_probs=32.7
Q ss_pred CceEEEeCCCCCChhhHHH-------HHHHhhC-----CCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP-------IMKAVSG-----SARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~-------~~~~l~~-----~~~vi~~Dl~G~G~S 978 (983)
.|.|||+||++++...|.. +.+.|.+ .|.|+++|.+|+|.+
T Consensus 62 ~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~ 114 (268)
T 1jjf_A 62 YSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPG 114 (268)
T ss_dssp BCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTT
T ss_pred ccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcc
Confidence 5899999999988877754 3666653 499999999998764
No 373
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=90.66 E-value=0.18 Score=61.21 Aligned_cols=42 Identities=10% Similarity=-0.019 Sum_probs=31.6
Q ss_pred CceEEEeCCCCCChh---hHH-HHHHHh--hCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE---EWI-PIMKAV--SGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~---~w~-~~~~~l--~~~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||++.+.. .|. .+...| ...|.|+++|+||||.|.
T Consensus 496 ~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~ 543 (719)
T 1z68_A 496 YPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQG 543 (719)
T ss_dssp EEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSC
T ss_pred ccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCc
Confidence 478999999998753 443 233434 357999999999999875
No 374
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=90.04 E-value=0.53 Score=49.46 Aligned_cols=39 Identities=15% Similarity=0.311 Sum_probs=29.8
Q ss_pred CceEEEeCCCCCChhhHHH---HHHHhh-CCCEEEEEcCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIP---IMKAVS-GSARCISIDLPGHG 976 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~---~~~~l~-~~~~vi~~Dl~G~G 976 (983)
.|.|||+||++++...|.. +...+. ..+.|+++|.+++|
T Consensus 51 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg 93 (283)
T 4b6g_A 51 LGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRG 93 (283)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCS
T ss_pred CCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccc
Confidence 5889999999999999964 234443 36999999987443
No 375
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=90.03 E-value=0.1 Score=63.48 Aligned_cols=41 Identities=27% Similarity=0.230 Sum_probs=32.2
Q ss_pred CceEEEeCCCCCCh---hhHH--HHHHHhh-CCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTG---EEWI--PIMKAVS-GSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~---~~w~--~~~~~l~-~~~~vi~~Dl~G~G~S 978 (983)
.|+|||+||++.+. ..|. .....|+ ..|.|+++|+||||.+
T Consensus 496 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~ 542 (723)
T 1xfd_A 496 YPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQ 542 (723)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSS
T ss_pred cCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccc
Confidence 58899999999873 3443 4556676 4699999999999984
No 376
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=89.19 E-value=1.3 Score=52.09 Aligned_cols=105 Identities=13% Similarity=0.023 Sum_probs=79.2
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++.+|++-=| |+.-.++.+.+|.. .++|+++|.-+-....+-+ +..+
T Consensus 53 Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l~~A~~--~~~Pll~itg~~~~~~~~~-----------------~~~Q 113 (563)
T 2uz1_A 53 AGHAAEGYARAGAKLGVALVTAGGGFTNAVTPIANAWL--DRTPVLFLTGSGALRDDET-----------------NTLQ 113 (563)
T ss_dssp HHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHHHHHHH--HTCCEEEEEEECCGGGTTS-----------------CCTT
T ss_pred HHHHHHHHHHHhCCCEEEEEccCccHHHHHHHHHHHHh--cCCCEEEEeCCCCcccCCc-----------------hhhh
Confidence 66788888888788888877444 45556789999877 7999999887765432110 1124
Q ss_pred C-CCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 N-ISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~-~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
. .|...+.+.+-....++++++++...+++|+. .+||+.|++..|
T Consensus 114 ~~~d~~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 114 AGIDQVAMAAPITKWAHRVMATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp CCCCHHHHHGGGCSEEEECCCGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred hhccHHHHhhhhhceEEEcCCHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 4 78999999998899999999988888887753 359999999977
No 377
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=89.14 E-value=0.11 Score=54.17 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=34.5
Q ss_pred EEEcccCceeEEEEeecCCccCCCCceEEEeCCCCCChhhHHHHHHHhhC---CCEEEEEcCC
Q 041113 914 LNVNSKDFCSFIKVQEIGQRIDIQDNILLFLHGFLGTGEEWIPIMKAVSG---SARCISIDLP 973 (983)
Q Consensus 914 ~~~~~~~~~~~~~~~~~g~~~~~~~~~lv~lHG~~~~~~~w~~~~~~l~~---~~~vi~~Dl~ 973 (983)
+.+..+.++|++... .+. .+++||||||+|++...|..+.+.|.. .+++++|+-|
T Consensus 18 ~~~~~~~l~y~ii~P--~~~---~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap 75 (246)
T 4f21_A 18 LYFQSNAMNYELMEP--AKQ---ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHAD 75 (246)
T ss_dssp -----CCCCEEEECC--SSC---CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGG
T ss_pred EEEecCCcCceEeCC--CCc---CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCC
Confidence 344455556654332 222 267999999999999999998888763 5788998764
No 378
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=88.87 E-value=5.1 Score=42.38 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=77.9
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccC-------------C-CChHHHHHHHHHHHHHc-CCCcEE--EEEcC-CCCCHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVAR-------------R-ADPIKDAEVIQEVRKKV-GHRIEL--RVDAN-RNWTYQ 715 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~-------------~-~~~~~d~~~v~~vr~~~-g~~~~l--~vDaN-~~~~~~ 715 (983)
.+++.+.+-++++.+.|...+||.=+. . .+.++=+++|++++++- ++++.| |-|+. .....+
T Consensus 91 g~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~ 170 (295)
T 1s2w_A 91 GNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLD 170 (295)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHH
Confidence 467888889999999999999996432 0 11223478999998874 345444 56776 566789
Q ss_pred HHHHHHhhcccCC--CceeecCCCChHHHHHHHhhcC--CcEEeC
Q 041113 716 EALEFGFLIKDCD--LQYIEEPVQNEEDIIKYCEESG--LPVALD 756 (983)
Q Consensus 716 ~a~~~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~--ipIa~d 756 (983)
++++.++.+++.| ..|+|-++++.+..+++.+... +|+...
T Consensus 171 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~ 215 (295)
T 1s2w_A 171 EALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEe
Confidence 9999999998875 5689977777899999999877 887543
No 379
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=88.84 E-value=0.54 Score=55.61 Aligned_cols=43 Identities=12% Similarity=-0.103 Sum_probs=33.7
Q ss_pred CceEEEeCCCCCChhhHHHH---H-HHh-hCCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPI---M-KAV-SGSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~---~-~~l-~~~~~vi~~Dl~G~G~S~~ 980 (983)
.|.||+.||++.+...|... . ..| ...|.|+++|.||||.|..
T Consensus 35 ~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g 82 (587)
T 3i2k_A 35 VPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEG 82 (587)
T ss_dssp EEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCS
T ss_pred eeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCC
Confidence 57899999999887665433 2 455 4569999999999999975
No 380
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=88.63 E-value=1.2 Score=52.67 Aligned_cols=106 Identities=13% Similarity=0.064 Sum_probs=80.0
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++.+|++-=| |..-.+..+.+|.. .++|+++|.-.-....+- .+..+
T Consensus 62 Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~gv~~A~~--~~vPll~itg~~~~~~~g-----------------~~~~Q 122 (590)
T 1ybh_A 62 GVFAAEGYARSSGKPGICIATSGPGATNLVSGLADALL--DSVPLVAITGQVPRRMIG-----------------TDAFQ 122 (590)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHHHHHH--HTCCEEEEEEECCGGGTT-----------------TTCTT
T ss_pred HHHHHHHHHHHHCCCEEEEeccCchHHHHHHHHHHHHh--hCCCEEEEeCcCCccccC-----------------CCccc
Confidence 67788898888778877766444 35556888988887 899999998766532110 01124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....++++++++...+++|+. .+||+.|++..|-
T Consensus 123 ~~d~~~~~~~~~k~~~~v~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~dv 173 (590)
T 1ybh_A 123 ETPIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDI 173 (590)
T ss_dssp CCCHHHHHGGGSSEEEECCCGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHH
T ss_pred ccCHHHHHHHHhCeEEecCCHHHHHHHHHHHHHHHhhCCCceEEEEeCcch
Confidence 579999999998899999999999999888874 2589999998763
No 381
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=88.48 E-value=1.3 Score=52.20 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=77.3
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++++|++-=| |+.-.+..+.+|.. .++|+++|.-+-....+-+ ...+
T Consensus 60 Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l~~A~~--~~vPll~itg~~~~~~~~~-----------------~~~Q 120 (566)
T 1ozh_A 60 AAFMAAAVGRITGKAGVALVTSGPGCSNLITGMATANS--EGDPVVALGGAVKRADKAK-----------------QVHQ 120 (566)
T ss_dssp HHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHHHHHHH--HTCCEEEEEEECCTTTC-----------------------
T ss_pred HHHHHHHHHHHHCCCEEEEEccChHHHHHHHHHHHHHh--cCCCEEEEeCCCccccCCC-----------------Cccc
Confidence 56788888877788888877444 35556799999987 7999999987765432110 1124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
..|...+.+.+-....++++++++...+++|+. .+||+.|++..|
T Consensus 121 ~~d~~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 121 SMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp CCCHHHHHGGGCSEEEECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred ccCHHHHHHHHhheEEEcCCHHHHHHHHHHHHHHHhcCCCCeEEEEeChh
Confidence 578999999998899999999998877777653 259999999865
No 382
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=88.26 E-value=1.3 Score=53.21 Aligned_cols=105 Identities=13% Similarity=0.032 Sum_probs=78.8
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++.+|++-=| |..-.+..|.+|.. .++|+++|.-+-....+-+ +..+
T Consensus 132 Aa~aAdGyAr~tGkpgvv~~TsGpG~~N~~~gia~A~~--d~vPllvItG~~~~~~~g~-----------------~a~Q 192 (677)
T 1t9b_A 132 AGHMAEGYARASGKPGVVLVTSGPGATNVVTPMADAFA--DGIPMVVFTGQVPTSAIGT-----------------DAFQ 192 (677)
T ss_dssp HHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHHHHHHH--HTCCEEEEEEECCTTTTTS-----------------CCTT
T ss_pred HHHHHHHHHHHHCCCEEEEECCChHHHHHHHHHHHHHH--cCCCEEEEeCCCChhhcCC-----------------CCcc
Confidence 56788888887788877766444 44556889999987 7999999987765432110 1124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
..|...+.+.+-....+|++++++...+++|+. .+||+.|++..|
T Consensus 193 ~~Dq~~i~~~~tk~~~~v~~~~~i~~~i~~A~~~A~~grpGPV~l~lP~D 242 (677)
T 1t9b_A 193 EADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKD 242 (677)
T ss_dssp CCCHHHHTGGGSSEEEECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred ccCHHHHhhhheeEEEEcCCHHHHHHHHHHHHHHHhhCCCceEEEEcCHH
Confidence 578889999888889999999999888888764 368999999855
No 383
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=87.90 E-value=0.39 Score=58.63 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=32.7
Q ss_pred CceEEEeCCCCCChh--hHHHHHHHhh-CCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE--EWIPIMKAVS-GSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--~w~~~~~~l~-~~~~vi~~Dl~G~G~S 978 (983)
.|+||++||.+.+.. .|......|. ..|.|+++|+||+|.+
T Consensus 488 ~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~ 531 (741)
T 1yr2_A 488 LPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEY 531 (741)
T ss_dssp CCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTT
T ss_pred CcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCC
Confidence 789999999987665 4555555554 4699999999999976
No 384
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=87.73 E-value=1.7 Score=51.23 Aligned_cols=107 Identities=13% Similarity=0.096 Sum_probs=78.9
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++++|++-=| +..-.+..+.+|.. .++|+++|.-+-....+-+ . ...+
T Consensus 60 Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~v~~A~~--~~~Pll~itg~~~~~~~~~---------------~-~~~Q 121 (573)
T 2iht_A 60 AGVAADVLARITGRPQACWATLGPGMTNLSTGIATSVL--DRSPVIALAAQSESHDIFP---------------N-DTHQ 121 (573)
T ss_dssp HHHHHHHHHHHHCSCEEEEECTTHHHHHHHHHHHHHHH--HTCCEEEEEEESCGGGCCT---------------T-TSTT
T ss_pred HHHHHHHHHHHHCCCEEEEEccCchHHHHHHHHHHHHh--hCCCEEEEcccCcccccCC---------------c-Cccc
Confidence 56788888877788888776444 34455788999887 7999999987765432110 0 1234
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....++++++++...+++|+. .+||+.|++..|-
T Consensus 122 ~~d~~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv 172 (573)
T 2iht_A 122 CLDSVAIVAPMSKYAVELQRPHEITDLVDSAVNAAMTEPVGPSFISLPVDL 172 (573)
T ss_dssp CCCHHHHHGGGSSEEEECCSGGGHHHHHHHHHHHHTBSSCCCEEEEEEHHH
T ss_pred cCCHHHHHHhHhhEEEEcCCHHHHHHHHHHHHHHHhcCCCceEEEEecchH
Confidence 579999999998899999999988887777753 2589999998663
No 385
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=87.73 E-value=0.77 Score=55.95 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=30.1
Q ss_pred CceEEEeCCCCCCh---hhHH-HHHHHhh--CCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG---EEWI-PIMKAVS--GSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~---~~w~-~~~~~l~--~~~~vi~~Dl~G~G~S~ 979 (983)
.|.||++||.+.+. ..|. .....|. ..|.|+++|.||+|.+.
T Consensus 502 ~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g 549 (740)
T 4a5s_A 502 YPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQG 549 (740)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSC
T ss_pred ccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCC
Confidence 58899999998873 2332 1223333 57999999999999764
No 386
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=87.72 E-value=0.5 Score=49.85 Aligned_cols=78 Identities=15% Similarity=0.261 Sum_probs=53.5
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhcCC-ceEEEEcCCCCCC-C-CCCCeeEEEEcCHHHHHHHHHhccCCCCChhHHH
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEECFP-CTYILVDNHPCRH-D-PSHSVTHRIQSTIVQFVDFLLKVQVPHRSSKWCS 233 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~-~-~~~~~~~~i~~d~~~~l~~L~~~~~~~~~~~w~~ 233 (983)
.+.+||++|++|+++.-+...+....... .++|.|+.++... . .....++.+.+|+...+..|.+.+ .|.+
T Consensus 194 ~~~~aDlllviGTSl~V~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~l------gw~~ 267 (285)
T 3glr_A 194 DFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELL------GWTE 267 (285)
T ss_dssp HHHHCSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHH------TCHH
T ss_pred HHhcCCEEEEeCCCCccccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHh------CCHH
Confidence 35689999999999866554433332222 3577788877521 0 224578899999999999999876 4776
Q ss_pred HHHHHHH
Q 041113 234 FLRALDM 240 (983)
Q Consensus 234 ~~~~~~~ 240 (983)
++.+...
T Consensus 268 el~~~~~ 274 (285)
T 3glr_A 268 EMRDLVQ 274 (285)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 387
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=87.63 E-value=5.3 Score=40.60 Aligned_cols=138 Identities=14% Similarity=0.238 Sum_probs=92.2
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI 732 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 732 (983)
..++++..+.++.+++.|++.+-+-.-. ....+.++++|+.+ +++.+- +..-.+.+++...++ .|-.|+
T Consensus 42 ~~~~~~a~~~a~al~~gGi~~iEvt~~t----~~a~e~I~~l~~~~-~~~~iG--aGTVlt~~~a~~Ai~----AGA~fI 110 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAENGLPAAEITFRS----DAAVEAIRLLRQAQ-PEMLIG--AGTILNGEQALAAKE----AGATFV 110 (232)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTS----TTHHHHHHHHHHHC-TTCEEE--EECCCSHHHHHHHHH----HTCSEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCC----CCHHHHHHHHHHhC-CCCEEe--ECCcCCHHHHHHHHH----cCCCEE
Confidence 4678889999999999999999987643 23467888899999 565444 444678888766654 466677
Q ss_pred ecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCC-CcCCHHHHHHHHHHHHHc-CCcEEe
Q 041113 733 EEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPS-VIGGFENAGLIARWAQRH-GKMAVV 810 (983)
Q Consensus 733 EeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~-~~GGl~~~~~~~~~A~~~-gi~~~~ 810 (983)
=-|-.+. +..+.+++.++|+..| +.+.. ......+.|+|++.+=|. ..||+.-...+ ..-. +++++.
T Consensus 111 vsP~~~~-~vi~~~~~~gi~~ipG--v~Tpt-----Ei~~A~~~Gad~vK~FPa~~~gG~~~lkal---~~p~p~ip~~p 179 (232)
T 4e38_A 111 VSPGFNP-NTVRACQEIGIDIVPG--VNNPS-----TVEAALEMGLTTLKFFPAEASGGISMVKSL---VGPYGDIRLMP 179 (232)
T ss_dssp ECSSCCH-HHHHHHHHHTCEEECE--ECSHH-----HHHHHHHTTCCEEEECSTTTTTHHHHHHHH---HTTCTTCEEEE
T ss_pred EeCCCCH-HHHHHHHHcCCCEEcC--CCCHH-----HHHHHHHcCCCEEEECcCccccCHHHHHHH---HHHhcCCCeee
Confidence 6675544 4444556679999887 44543 355556679999887774 34776443333 3333 577665
Q ss_pred CC
Q 041113 811 SA 812 (983)
Q Consensus 811 ~~ 812 (983)
.+
T Consensus 180 tG 181 (232)
T 4e38_A 180 TG 181 (232)
T ss_dssp BS
T ss_pred Ec
Confidence 44
No 388
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=87.07 E-value=0.28 Score=50.52 Aligned_cols=64 Identities=13% Similarity=0.148 Sum_probs=45.1
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhc--CCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEEC--FPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKV 222 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~--~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 222 (983)
.+++||++|++|+++.-.....+.... ...++|.|+.++...+. ..++.|.+++.++|..|.+.
T Consensus 164 ~~~~adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t~~~~--~~~~~i~~~~~~~l~~l~~~ 229 (235)
T 1s5p_A 164 ALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGN--EFAEKYYGPASQVVPEFVEK 229 (235)
T ss_dssp HHHHCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSCC-----CCSEEEESCHHHHHHHHHHH
T ss_pred HHhcCCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCCCCCc--cccEEEeCCHHHHHHHHHHH
Confidence 456899999999998654443333221 24568889998876654 46788999999999998764
No 389
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=86.83 E-value=3.4 Score=41.15 Aligned_cols=141 Identities=16% Similarity=0.140 Sum_probs=90.7
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI 732 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 732 (983)
..+.++..+.++.+.+.|+..+.+..+.+ + -.+.++++|+.++++..+.++. ..+++++....+ .+..++
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~-~---~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~----~Gad~i 87 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVP-D---ADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVE----SGAEFI 87 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTST-T---HHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHH----HTCSEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCh-h---HHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHH----cCCCEE
Confidence 46788888999999999999999877642 2 2345888888886677776653 447777655443 466677
Q ss_pred ecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHc-CCcEEeC
Q 041113 733 EEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRH-GKMAVVS 811 (983)
Q Consensus 733 EeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~-gi~~~~~ 811 (983)
=-|.. ..++.+..++.++|+..+- .+.. ......+.|+|++.+.+...+|+... .++.+.. +++++..
T Consensus 88 v~~~~-~~~~~~~~~~~g~~vi~g~--~t~~-----e~~~a~~~Gad~vk~~~~~~~g~~~~---~~l~~~~~~~pvia~ 156 (205)
T 1wa3_A 88 VSPHL-DEEISQFCKEKGVFYMPGV--MTPT-----ELVKAMKLGHTILKLFPGEVVGPQFV---KAMKGPFPNVKFVPT 156 (205)
T ss_dssp ECSSC-CHHHHHHHHHHTCEEECEE--CSHH-----HHHHHHHTTCCEEEETTHHHHHHHHH---HHHHTTCTTCEEEEB
T ss_pred EcCCC-CHHHHHHHHHcCCcEECCc--CCHH-----HHHHHHHcCCCEEEEcCccccCHHHH---HHHHHhCCCCcEEEc
Confidence 33443 3455566667899988732 2322 34555677899887766444454433 3333445 6887665
Q ss_pred CCC
Q 041113 812 AAF 814 (983)
Q Consensus 812 ~~~ 814 (983)
+..
T Consensus 157 GGI 159 (205)
T 1wa3_A 157 GGV 159 (205)
T ss_dssp SSC
T ss_pred CCC
Confidence 544
No 390
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=86.82 E-value=1.8 Score=45.55 Aligned_cols=38 Identities=13% Similarity=0.295 Sum_probs=29.3
Q ss_pred CceEEEeCCCC--CChhhHHH---HHHHhhC-CCEEEEEcCCCC
Q 041113 938 DNILLFLHGFL--GTGEEWIP---IMKAVSG-SARCISIDLPGH 975 (983)
Q Consensus 938 ~~~lv~lHG~~--~~~~~w~~---~~~~l~~-~~~vi~~Dl~G~ 975 (983)
.|+|||+||++ .+...|.. +.+.+.+ .+.|+++|.++.
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~ 77 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAY 77 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTT
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCC
Confidence 37999999995 57788986 4455654 499999999764
No 391
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=86.76 E-value=0.42 Score=51.55 Aligned_cols=35 Identities=11% Similarity=0.230 Sum_probs=32.8
Q ss_pred CceEEEeCCCCCChhhHHHHHHHhhCCCEEEEEcCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIMKAVSGSARCISIDLPG 974 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G 974 (983)
+++|+|+||++++...|..+.+.|. ++|+++|+|+
T Consensus 46 ~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~ 80 (316)
T 2px6_A 46 ERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTR 80 (316)
T ss_dssp SCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCT
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCC
Confidence 6899999999999999999999996 9999999994
No 392
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=86.33 E-value=0.78 Score=48.73 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=47.0
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCC-CC-CCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCR-HD-PSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~-~~-~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
.+.+||++|++|+++.-.....+..... ..++|.|+.++.. +. .....++.|.+|+..++..|.+.+
T Consensus 208 ~~~~~DlllviGTSl~V~Pa~~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l 277 (289)
T 1q1a_A 208 KHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 277 (289)
T ss_dssp --CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred HhccCCEEEEEccCCChhhHHHHHHHHhcCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHc
Confidence 4679999999999987655554444443 3367788887753 10 123467889999999999998765
No 393
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=86.23 E-value=2.6 Score=50.03 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=78.8
Q ss_pred hHHHHHhhhhcc-CceEEEEEccch-hhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccC
Q 041113 328 LLSTAIGFAVGC-NKHVLCVVGDIS-FLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTT 405 (983)
Q Consensus 328 ~lpaaiGaalA~-~~~vv~i~GDGs-f~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (983)
+.-+|.|.+.++ +++.+|++-=|. ..-.+..|.+|.. .++|+++|.-+-....+- .+..
T Consensus 77 Aa~~A~GyAr~tgg~~~v~~~TsGpG~~N~~~~l~~A~~--~~vPlvvItg~~p~~~~~-----------------~~~~ 137 (616)
T 2pan_A 77 ASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASA--DSIPILCITGQAPRARLH-----------------KEDF 137 (616)
T ss_dssp HHHHHHHHHHHSTTCCEEEEECSTHHHHTSHHHHHHHHH--TTCCEEEEEEECCGGGTT-----------------TTCT
T ss_pred HHHHHHHHHHhcCCCceEEEeCCCchHHHHHHHHHHHHh--cCCCEEEEecCCcccccC-----------------cccc
Confidence 667889988887 777777654443 3445789999987 799999998876543111 0112
Q ss_pred CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 406 HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 406 ~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
+..|...+.+.+-....++.+++++...|++|+. .+||+.|++..|
T Consensus 138 Q~~d~~~~~~~~tk~~~~v~~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~d 188 (616)
T 2pan_A 138 QAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFD 188 (616)
T ss_dssp TCCCHHHHHGGGSSEEEECCSGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred cccCHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcCCCceEEEEcchh
Confidence 4578999999998889999999999888888764 268999999865
No 394
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.21 E-value=1.4 Score=46.72 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHcCCCcEE--EEEcCCCCCHHHHHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKVGHRIEL--RVDANRNWTYQEALE 719 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~g~~~~l--~vDaN~~~~~~~a~~ 719 (983)
.+++.+.+.++.+.+.|...+||.=+.. .+.++=+++|++++++ |+++.| |.|+......+++++
T Consensus 101 g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~ 179 (305)
T 3ih1_A 101 GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIE 179 (305)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHH
Confidence 4688888889999999999999964420 1234558899999999 777766 477765567899999
Q ss_pred HHhhcccC--CCceeecCCCChHHHHHHHhhcCCcEEe
Q 041113 720 FGFLIKDC--DLQYIEEPVQNEEDIIKYCEESGLPVAL 755 (983)
Q Consensus 720 ~~~~l~~~--~i~~iEeP~~~~~~~~~l~~~~~ipIa~ 755 (983)
.++.+++. +..|+|-+- +.+.++++.+..++|+..
T Consensus 180 Ra~ay~eAGAD~i~~e~~~-~~~~~~~i~~~~~~P~~~ 216 (305)
T 3ih1_A 180 RANAYVKAGADAIFPEALQ-SEEEFRLFNSKVNAPLLA 216 (305)
T ss_dssp HHHHHHHHTCSEEEETTCC-SHHHHHHHHHHSCSCBEE
T ss_pred HHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHcCCCEEE
Confidence 99999875 567898774 489999999999999854
No 395
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=86.05 E-value=3.5 Score=44.81 Aligned_cols=139 Identities=10% Similarity=0.111 Sum_probs=87.9
Q ss_pred EEEeecCCCCHHHHHHHHHHhhhcCCC-EEEEeccCC---------CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHH
Q 041113 646 ICALIDSNKSPVEVASIATTLVEEGFT-AIKLKVARR---------ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQ 715 (983)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~KiKig~~---------~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~ 715 (983)
+..++ ...+++++.+.++.+.+.||. .|-+-++.+ .+++.-.+.++++|+++.--+.+.+=.| ++..
T Consensus 131 vivsI-~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~--~~~~ 207 (345)
T 3oix_A 131 HFLSL-VGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY--FDIV 207 (345)
T ss_dssp CEEEE-CCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC--CCHH
T ss_pred EEEEe-cCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC--CCHH
Confidence 33444 246789999999888778998 999998753 1334445677777777643333444444 6888
Q ss_pred HHHHHHhhcccCCCcee------------e--cC---------------CC--ChHHHHHHHhhc--CCcEEeCCCccCc
Q 041113 716 EALEFGFLIKDCDLQYI------------E--EP---------------VQ--NEEDIIKYCEES--GLPVALDETIDKF 762 (983)
Q Consensus 716 ~a~~~~~~l~~~~i~~i------------E--eP---------------~~--~~~~~~~l~~~~--~ipIa~dEs~~~~ 762 (983)
+..+.++.....++..+ . .| +. .++-++++++.. .+||.+.=-+.+.
T Consensus 208 ~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~ 287 (345)
T 3oix_A 208 HFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTG 287 (345)
T ss_dssp HHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSH
T ss_pred HHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCCh
Confidence 87777777666555432 1 11 11 134557788887 6999888888886
Q ss_pred CCChHHHHHhhcCCCceEEEEcCC-CcCCHH
Q 041113 763 QKDPLNMLEKYAHPGIVAIVIKPS-VIGGFE 792 (983)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~i~~k~~-~~GGl~ 792 (983)
.| ..+.+..|+|.|++--. ..+|..
T Consensus 288 ~d-----a~~~l~aGAd~V~igra~~~~gP~ 313 (345)
T 3oix_A 288 RD-----AFEHILCGASMVQIGTALHQEGPQ 313 (345)
T ss_dssp HH-----HHHHHHHTCSEEEESHHHHHHCTH
T ss_pred HH-----HHHHHHhCCCEEEEChHHHhcChH
Confidence 54 33344468888887544 334443
No 396
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=85.86 E-value=3.2 Score=45.25 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=84.2
Q ss_pred EEEEeecCCCCHHHHHHHHHHhh---hcCCCEEEEeccCC---------CChHHHHHHHHHHHHHcCCCcEEEEEcCCCC
Q 041113 645 KICALIDSNKSPVEVASIATTLV---EEGFTAIKLKVARR---------ADPIKDAEVIQEVRKKVGHRIELRVDANRNW 712 (983)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~---~~G~~~~KiKig~~---------~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~ 712 (983)
|+..++ .+.+++++.+.++.+. +.|+..|-+-++.+ .+++.-.+.++++|++.. +.+.|=---.|
T Consensus 128 pvivsI-~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~--~PV~vKi~p~~ 204 (354)
T 4ef8_A 128 PLFLSM-SGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYP--HSFGVKMPPYF 204 (354)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCC--SCEEEEECCCC
T ss_pred cEEEEe-ccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhC--CCeEEEecCCC
Confidence 444454 3457888888888776 57999999998753 134444678888998874 33333333346
Q ss_pred CHHHHHHHHhhcccCC-Ccee----------------ecC---------------CC--ChHHHHHHHhhc-CCcEEeCC
Q 041113 713 TYQEALEFGFLIKDCD-LQYI----------------EEP---------------VQ--NEEDIIKYCEES-GLPVALDE 757 (983)
Q Consensus 713 ~~~~a~~~~~~l~~~~-i~~i----------------EeP---------------~~--~~~~~~~l~~~~-~ipIa~dE 757 (983)
+.++..++++.+++.+ +.+| +.| +. +++-++++++.. .+||.+.=
T Consensus 205 d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~G 284 (354)
T 4ef8_A 205 DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCG 284 (354)
T ss_dssp SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEES
T ss_pred CHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 7777777787776766 4433 111 11 244556777765 69998887
Q ss_pred CccCcCCChHHHHHhhcCCCceEEEEc
Q 041113 758 TIDKFQKDPLNMLEKYAHPGIVAIVIK 784 (983)
Q Consensus 758 s~~~~~~~~~~~~~~~~~~~~~~i~~k 784 (983)
-+.+..| ..+.+..|++.+++-
T Consensus 285 GI~s~~d-----a~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 285 GVYTGED-----AFLHVLAGASMVQVG 306 (354)
T ss_dssp CCCSHHH-----HHHHHHHTEEEEEEC
T ss_pred CcCCHHH-----HHHHHHcCCCEEEEh
Confidence 7777653 333444688888764
No 397
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=85.45 E-value=2.3 Score=46.82 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=32.5
Q ss_pred CceEEEeCCCCC---Ch--hhHHHHHHHhhC--CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLG---TG--EEWIPIMKAVSG--SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~---~~--~~w~~~~~~l~~--~~~vi~~Dl~G~G~S~ 979 (983)
.|.|||+||.+. +. ..|..+...|+. .|.|+++|.|+.+...
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~ 160 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHR 160 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCC
Confidence 589999999763 22 347888888865 6999999999876554
No 398
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.26 E-value=1.2 Score=54.08 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=31.8
Q ss_pred CceEEEeCCCCCChhh--HHHHH-HHhh-CCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEE--WIPIM-KAVS-GSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~--w~~~~-~~l~-~~~~vi~~Dl~G~G~S 978 (983)
.|+||++||.+.++.. |.... ..+. ..|.|+++|+||+|.+
T Consensus 466 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~ 510 (710)
T 2xdw_A 466 HPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY 510 (710)
T ss_dssp SCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT
T ss_pred ccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCC
Confidence 6899999998876654 44433 4456 6799999999999976
No 399
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=85.18 E-value=1 Score=53.67 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=32.0
Q ss_pred CceEEEeCCCCCCh-------hhHHHHH----HHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG-------EEWIPIM----KAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~-------~~w~~~~----~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|.||++||++.+. ..|...+ ..|++ .|.|+++|.||||.|..
T Consensus 51 ~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 51 APIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred eeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 47788899998754 2454322 55654 69999999999999874
No 400
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=84.90 E-value=2 Score=45.09 Aligned_cols=37 Identities=11% Similarity=0.018 Sum_probs=29.1
Q ss_pred ceEEEeCCCC--CChhhHHHHH---HHhhC-CCEEEEEcCCCC
Q 041113 939 NILLFLHGFL--GTGEEWIPIM---KAVSG-SARCISIDLPGH 975 (983)
Q Consensus 939 ~~lv~lHG~~--~~~~~w~~~~---~~l~~-~~~vi~~Dl~G~ 975 (983)
++|||+||++ .+...|..+. +.+.+ .+.|+++|.+|.
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~ 72 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQS 72 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTT
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCC
Confidence 5899999995 4888998753 45654 499999998864
No 401
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=84.68 E-value=1.2 Score=47.68 Aligned_cols=111 Identities=8% Similarity=-0.003 Sum_probs=71.4
Q ss_pred eEEEEcc-CCCh-hHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCCCCEEEE
Q 041113 89 GLLLVGA-VHNE-DEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQFDVIIQ 166 (983)
Q Consensus 89 PvIl~G~-g~~~-~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~aDlvl~ 166 (983)
.+|+.|+ |... +..+.+.+||++||+-|-.|-- -+ + .|.+|.+|- +|..|. .-.++|-|.
T Consensus 193 ~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaSR~-~v-d---~Gw~~~~~Q----VGqTGk---------~V~P~lYiA 254 (307)
T 1efp_A 193 RRVVSGGRGLGSKESFAIIEELADKLGAAVGASRA-AV-D---SGYAPNDWQ----VGQTGK---------VVAPELYVA 254 (307)
T ss_dssp SEEEEECGGGCSSSTTHHHHHHHHHHTCEEEECHH-HH-H---TTSSCGGGB----BSSSSB---------CCCCSEEEE
T ss_pred CEEEEcCCcCCCHHHHHHHHHHHHHhCCceeecHH-HH-h---CCCCChhhE----eccCCc---------ccCCceEEE
Confidence 4566655 5443 2346899999999998866531 11 0 255555432 344331 236899999
Q ss_pred eCCccccHHHHHHHHhcCC-ceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhc
Q 041113 167 IGSRITSKRISQMIEECFP-CTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKV 222 (983)
Q Consensus 167 iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 222 (983)
+|-+=--.++.+ .+. +.+|-||.|++.. -+..+|..|++|+..++.+|.+.
T Consensus 255 ~GISGAiQHlaG----m~~s~~IVAIN~D~~Ap-IF~~ADygiVgDl~~v~P~L~~~ 306 (307)
T 1efp_A 255 VGISGAIQHLAG----MKDSKVIVAINKDEEAP-IFQIADYGLVGDLFSVVPELTGK 306 (307)
T ss_dssp ESCCCCHHHHTT----TTTCSEEEEEESCTTCG-GGGTCSEEEESCHHHHHHHHHHT
T ss_pred EeccCcHHHHhh----hccCCEEEEEeCCCCCC-cccccCeEEeeeHHHHHHHHHhh
Confidence 998743223222 223 3578899998743 24568999999999999999875
No 402
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=84.54 E-value=2.3 Score=50.12 Aligned_cols=105 Identities=10% Similarity=-0.019 Sum_probs=78.0
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+.+++.+|++-=| ++...++.+.+|.. .++|+++|.-+-....+-+ +..+
T Consensus 55 Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~gl~~A~~--~~vPll~Itg~~p~~~~g~-----------------~~~Q 115 (590)
T 1v5e_A 55 GAMAAVMQSKFGGNLGVTVGSGGPGASHLINGLYDAAM--DNIPVVAILGSRPQRELNM-----------------DAFQ 115 (590)
T ss_dssp HHHHHHHHHHTTCCCCEEEECTTHHHHTTHHHHHHHHH--HTCCEEEEEEECCGGGTTT-----------------TCTT
T ss_pred HHHHHHHHHHHHCCCEEEEeCcChHHHHHHHHHHHHHh--cCCCEEEEcCCCCcccCCC-----------------Cccc
Confidence 67789998888888877777544 45556889999877 7999999988765431110 0123
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-.....+++++++...+++|+. .+||+.| +..|-
T Consensus 116 ~~d~~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP~dv 165 (590)
T 1v5e_A 116 ELNQNPMYDHIAVYNRRVAYAEQLPKLVDEAARMAIAKRGVAVLE-VPGDF 165 (590)
T ss_dssp CCCCHHHHHTTCSEEEECCSGGGHHHHHHHHHHHHHHTTSEEEEE-EETTG
T ss_pred ccCHHHHHHhhccEEEEeCCHHHHHHHHHHHHHHHhcCCCceEEE-Eccch
Confidence 468888999998889999999988887777753 2489999 88774
No 403
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=84.51 E-value=2.9 Score=49.02 Aligned_cols=111 Identities=7% Similarity=-0.022 Sum_probs=73.5
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++++|++-=| |..-.+..+.+|.. .++|+++|.-+-....+-+ ..+ .....+
T Consensus 71 Aa~~A~GyAr~tgkp~v~~~TsGpG~~N~~~gv~~A~~--~~vPll~itg~~~~~~~~~----------~~~--~~~~~q 136 (565)
T 2nxw_A 71 VGFAADAAARYSSTLGVAAVTYGAGAFNMVNAVAGAYA--EKSPVVVISGAPGTTEGNA----------GLL--LHHQGR 136 (565)
T ss_dssp HHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHHHHHHH--TTCCEEEEEEECCTTCC------------CCC--C-----
T ss_pred HHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHh--hCCCEEEEeCCCChhhhcc----------Ccc--eeeecc
Confidence 56678888887788888877433 34556788999887 8999999988743321110 000 001112
Q ss_pred CCC-HHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcCc
Q 041113 407 NIS-IQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~d-f~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~~ 452 (983)
..| ...+.+.+-....++++++++...+++|+ ..+||+.|++..|-
T Consensus 137 ~~d~q~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~Dv 187 (565)
T 2nxw_A 137 TLDTQFQVFKEITVAQARLDDPAKAPAEIARVLGAARAQSRPVYLEIPRNM 187 (565)
T ss_dssp --CHHHHHHTTSCSCEEECCCTTTHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred chhhHHHHHHhhheEEEEeCCHHHHHHHHHHHHHHHHhCCCCEEEECChhh
Confidence 456 77888888778889998887766666654 34799999999764
No 404
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=84.22 E-value=0.88 Score=49.77 Aligned_cols=65 Identities=14% Similarity=0.286 Sum_probs=49.0
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccC
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQV 224 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~ 224 (983)
.+.+||++|++|+++.-.....+....+ ...+|.|+.++... ...++.|.+++..++..|.+.+.
T Consensus 252 ~~~~aDllLviGTSL~V~Paa~lv~~~~~~~~~v~IN~~~t~~---~~~dl~i~g~~~~vl~~L~~~lg 317 (354)
T 2hjh_A 252 DILECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH---AEFDLSLLGYCDDIAAMVAQKCG 317 (354)
T ss_dssp HTTTCCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCTT---SCCSEEEESCHHHHHHHHHHHHT
T ss_pred HHhhCCEEEEECcCCCchhHHHHHHHHhcCCcEEEEcCCCCCC---CCcCEEEeCCHHHHHHHHHHHcC
Confidence 4578999999999987655554444433 23678899888653 24788999999999999988764
No 405
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=83.87 E-value=1.7 Score=46.69 Aligned_cols=113 Identities=11% Similarity=0.091 Sum_probs=73.1
Q ss_pred eEEEEcc-CCCh-hHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCCCCEEEE
Q 041113 89 GLLLVGA-VHNE-DEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQFDVIIQ 166 (983)
Q Consensus 89 PvIl~G~-g~~~-~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~aDlvl~ 166 (983)
.+|+.|+ |..+ +..+.+.+||++||+-|-.|-- -+ + .|.+|.+|- +|..|. .-.++|-|.
T Consensus 198 ~ivVsgGrG~~~~e~f~~~~~LA~~Lga~vgaSR~-~v-d---~Gw~~~~~Q----VGqTGk---------~V~P~lYiA 259 (315)
T 1efv_A 198 KVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRA-AV-D---AGFVPNDMQ----VGQTGK---------IVAPELYIA 259 (315)
T ss_dssp SEEEEECGGGCSTGGGHHHHHHHHHHTCEEEECHH-HH-H---TTSSCGGGB----BSTTSB---------CCCCSEEEE
T ss_pred CEEEEcCCcCCChHHHHHHHHHHHHhCCceeecHH-HH-h---CCCCCHHhe----eccCCc---------ccCcceEEE
Confidence 3555555 5543 2356899999999998866531 11 0 255555442 344331 236799999
Q ss_pred eCCccccHHHHHHHHhcCC-ceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccC
Q 041113 167 IGSRITSKRISQMIEECFP-CTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQV 224 (983)
Q Consensus 167 iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~ 224 (983)
+|-+=.-.++.+ .+. +.+|-||.|++.. -+..+|..|++|+..++.+|.+.++
T Consensus 260 ~GISGAiQHlaG----m~~s~~IVAIN~D~~Ap-If~~ADygiVgDl~~v~P~L~~~l~ 313 (315)
T 1efv_A 260 VGISGAIQHLAG----MKDSKTIVAINKDPEAP-IFQVADYGIVADLFKVVPEMTEILK 313 (315)
T ss_dssp ESCCCCHHHHTT----TTTCSEEEEEESCTTCG-GGGTCSEEEESCHHHHHHHHHHHTC
T ss_pred ecccCcHHHHhh----cccCCEEEEEeCCCCCC-cchhcCeEEeeeHHHHHHHHHHHHh
Confidence 998743223222 223 3578899998743 2456899999999999999998763
No 406
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=83.74 E-value=17 Score=38.24 Aligned_cols=124 Identities=16% Similarity=0.143 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccC-------------CCChH-HHHHHHHHHHHHcC-CCcE--EEEEcC-CCCCHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVAR-------------RADPI-KDAEVIQEVRKKVG-HRIE--LRVDAN-RNWTYQ 715 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~-------------~~~~~-~d~~~v~~vr~~~g-~~~~--l~vDaN-~~~~~~ 715 (983)
.+++++.+-++++.+.|...+||.=+. ...+. +=+++|++++++.. +++. =|.|+. .....+
T Consensus 87 g~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~ 166 (290)
T 2hjp_A 87 GNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQ 166 (290)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHH
Confidence 488999999999999999999996432 01122 33789999988731 3444 457877 566799
Q ss_pred HHHHHHhhcccCC--CceeecCCCChHHHHHHHhhcC--CcEEeCCCccCcCCChHHHHHhhcCCC-ceEEE
Q 041113 716 EALEFGFLIKDCD--LQYIEEPVQNEEDIIKYCEESG--LPVALDETIDKFQKDPLNMLEKYAHPG-IVAIV 782 (983)
Q Consensus 716 ~a~~~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~--ipIa~dEs~~~~~~~~~~~~~~~~~~~-~~~i~ 782 (983)
++++.++.+++.| ..|+|--+++.+.++++.+..+ +|+...-+..... .+..+.+.| +..+.
T Consensus 167 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~-----~~~eL~~lG~v~~v~ 233 (290)
T 2hjp_A 167 EAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQL-----TEADIAALSKVGIVI 233 (290)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTS-----CHHHHHTCTTEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCC-----CHHHHHhcCCeeEEE
Confidence 9999999998764 5689984455799999999988 9988642211111 144555667 65544
No 407
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=83.58 E-value=0.44 Score=49.39 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=47.0
Q ss_pred cccCCCCEEEEeCCccccHHHHHHH--HhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 156 KDWIQFDVIIQIGSRITSKRISQMI--EECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 156 ~~~~~aDlvl~iG~~~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
..+++||++|++|+++.-....... ......++|.|+.++...+. ..++.|.+++.+++..|.+.+
T Consensus 176 ~~~~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~~d~--~~~~~i~~~~~~~l~~l~~~l 243 (246)
T 1yc5_A 176 GLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDD--IATLKYNMDVVEFARRVMEEG 243 (246)
T ss_dssp HHHHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCCTTGG--GCSEEECSCHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCCCCCc--ceeEEEeCCHHHHHHHHHHHc
Confidence 3456899999999987654433232 12224568889998876643 358899999999999997654
No 408
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=83.40 E-value=3 Score=48.74 Aligned_cols=105 Identities=15% Similarity=0.021 Sum_probs=75.9
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+-+++++.+|++-=| |..-.+..+.+|.. .++|+++|.-+-....+- .+..+
T Consensus 53 Aa~~A~GyAr~tg~~~v~~~TsGpG~~N~~~gi~~A~~--~~vPvl~itg~~~~~~~~-----------------~~~~Q 113 (549)
T 3eya_A 53 AAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHR--NHVPVLAIAAHIPSSEIG-----------------SGYFQ 113 (549)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHHHHHH--TTCCEEEEEEESCGGGTT-----------------SCCTT
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCcHhhhHHHHHHHHh--hCCCEEEEeCCCchhhcC-----------------CCCCC
Confidence 56788888777788888876443 34455789999887 899999888765432110 01124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~ 451 (983)
..|...+.+.+-....++.+++++...+++|+ ...||+.|++..|
T Consensus 114 ~~d~~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d 162 (549)
T 3eya_A 114 ETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGD 162 (549)
T ss_dssp CCCHHHHTSTTCSEEEECCSGGGHHHHHHHHHHHHHHTTSEEEEEEEHH
T ss_pred ccCHHHHHhhhhheEEEeCCHHHHHHHHHHHHHHHhhCCCCEEEEeChh
Confidence 56888888888888899999988877777765 3579999999865
No 409
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=83.31 E-value=5.5 Score=42.11 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHc-CCCcEE--EEEcCCCCCHHHHHH
Q 041113 655 SPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKV-GHRIEL--RVDANRNWTYQEALE 719 (983)
Q Consensus 655 ~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~-g~~~~l--~vDaN~~~~~~~a~~ 719 (983)
+++.+.+-++++.+.|...+||.=+.. .+.++-+++|++++++- ++++.| |.|+......+++++
T Consensus 92 ~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ 171 (295)
T 1xg4_A 92 SAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIE 171 (295)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHH
Confidence 789999999999999999999964420 12234567888888875 445544 567654456799999
Q ss_pred HHhhcccCC--CceeecCCCChHHHHHHHhhcCCcEEe
Q 041113 720 FGFLIKDCD--LQYIEEPVQNEEDIIKYCEESGLPVAL 755 (983)
Q Consensus 720 ~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~ipIa~ 755 (983)
.++.+++.| ..|+|-+ ++.+.++++.+..++|+..
T Consensus 172 ra~ay~eAGAd~i~~e~~-~~~~~~~~i~~~~~iP~~~ 208 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPEAI-TELAMYRQFADAVQVPILA 208 (295)
T ss_dssp HHHHHHHTTCSEEEETTC-CSHHHHHHHHHHHCSCBEE
T ss_pred HHHHHHHcCCCEEEEeCC-CCHHHHHHHHHHcCCCEEE
Confidence 999998875 5688875 5589999999999999854
No 410
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=83.13 E-value=0.64 Score=48.92 Aligned_cols=63 Identities=6% Similarity=0.028 Sum_probs=46.1
Q ss_pred cccCCCCEEEEeCCccccHHHHHHHH--hcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHH
Q 041113 156 KDWIQFDVIIQIGSRITSKRISQMIE--ECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLL 220 (983)
Q Consensus 156 ~~~~~aDlvl~iG~~~~~~~~~~~~~--~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~ 220 (983)
..+.+||++|++|+++.-+...++.. .....+++.|+.++...+. ..++.|.+++..+|..|+
T Consensus 208 ~~~~~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~d~--~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 208 RELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATN--RFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp HHHHHCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCCTTGG--GSSEEEESCHHHHHHHHH
T ss_pred HHHhcCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCCCCCc--ceeEEEeCCHHHHHHHHh
Confidence 34578999999999986555443322 2234568889998876654 567889999999998875
No 411
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=82.91 E-value=1.6 Score=49.06 Aligned_cols=65 Identities=14% Similarity=0.294 Sum_probs=49.3
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhcCC-ceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhccC
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEECFP-CTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQV 224 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~~ 224 (983)
.+.+||++|++|+++.-....+.....+. .++|.|+.++... ...++.+.|++.+++..|.+.+.
T Consensus 390 ~~~~aDLlLVIGTSL~VyPaA~Lv~~a~~~~p~ViIN~ept~~---~~~Dl~l~G~cdevv~~L~~~LG 455 (492)
T 4iao_A 390 DILECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH---AEFDLSLLGYCDDIAAMVAQKCG 455 (492)
T ss_dssp HTTTCSEEEEESCCCCEETGGGHHHHSBTTSCEEEEESSCCTT---SCCSEEEESCHHHHHHHHHHHTT
T ss_pred HHhhCCEEEEeccCCCccchhhHHHHHhcCCcEEEEcCCCCCC---CCccEEEeCCHHHHHHHHHHHhC
Confidence 46799999999999876665544443333 3577799888642 34689999999999999998874
No 412
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=82.86 E-value=0.75 Score=56.25 Aligned_cols=42 Identities=10% Similarity=0.032 Sum_probs=33.0
Q ss_pred CceEEEeCCCCCChh--hHHHHHHHhhC-CCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE--EWIPIMKAVSG-SARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--~w~~~~~~l~~-~~~vi~~Dl~G~G~S~ 979 (983)
.|+||++||.+++.. .|......|.+ .|.|+++|+||+|.+.
T Consensus 509 ~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G 553 (751)
T 2xe4_A 509 QPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELG 553 (751)
T ss_dssp CCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTC
T ss_pred ccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcC
Confidence 689999999887655 46665556644 5999999999999753
No 413
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=82.82 E-value=3.4 Score=43.70 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHc-CCCcEE--EEEcCCCCCHHHHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKV-GHRIEL--RVDANRNWTYQEAL 718 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~-g~~~~l--~vDaN~~~~~~~a~ 718 (983)
.+++.+.+-++.+.+.|...+||.=+.. -+.++=+++|++.+++- ++++.| |.|+......++|+
T Consensus 95 g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai 174 (298)
T 3eoo_A 95 GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAI 174 (298)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHH
Confidence 4788889999999999999999953210 12344578998888875 456554 57887666789999
Q ss_pred HHHhhcccC--CCceeecCCCChHHHHHHHhhcCCcEEeC
Q 041113 719 EFGFLIKDC--DLQYIEEPVQNEEDIIKYCEESGLPVALD 756 (983)
Q Consensus 719 ~~~~~l~~~--~i~~iEeP~~~~~~~~~l~~~~~ipIa~d 756 (983)
+.++...+. +..|+|-+- +.++++++.+..++|+...
T Consensus 175 ~Ra~ay~~AGAD~if~~~~~-~~ee~~~~~~~~~~Pl~~n 213 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFPEAMK-TLDDYRRFKEAVKVPILAN 213 (298)
T ss_dssp HHHHHHHHTTCSEEEECCCC-SHHHHHHHHHHHCSCBEEE
T ss_pred HHHHhhHhcCCCEEEeCCCC-CHHHHHHHHHHcCCCeEEE
Confidence 999998876 577998875 5999999999998998553
No 414
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=82.78 E-value=0.81 Score=48.83 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=47.4
Q ss_pred ccCCCCEEEEeCCccccHHHHHHH--HhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMI--EECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
.+.+||++|++|+++.-+...++. ......+++.|+..+...+ ...++.|.+++.+++..|.+.+
T Consensus 203 ~~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t~~d--~~adl~i~g~~~evl~~L~~~L 269 (318)
T 3k35_A 203 ASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHD--RHADLRIHGYVDEVMTRLMKHL 269 (318)
T ss_dssp HHHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCCTTG--GGCSEEECSCHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCCCCC--CcccEEEeCCHHHHHHHHHHHh
Confidence 356899999999998655543332 1223456788998886554 3568889999999999998765
No 415
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=82.77 E-value=0.75 Score=43.16 Aligned_cols=140 Identities=10% Similarity=0.085 Sum_probs=71.8
Q ss_pred hHHHHHHHHhcCCceEEEEccCCC-hhHHH---HHHHHHHhcCCcEE--eccccCccchhhhhhhhhhcccccc--cc-c
Q 041113 75 QMAEVLELVQGVNKGLLLVGAVHN-EDEIW---AVLHLARHIRWPVV--ADILSGLRLRKLLASFLETEQNILF--LD-H 145 (983)
Q Consensus 75 ~i~~~~~~L~~AkrPvIl~G~g~~-~~~~~---~l~~lae~l~~Pv~--~t~~sg~~~~~~kg~~~~~hp~~~~--~g-~ 145 (983)
..++++++|..|++.+|+-|+|.. ..+.. ++.++.+..|+-|= -.|-+ |-.|.. =+.|. .+ -
T Consensus 12 ~~~~~a~~l~~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA--------GRMPGh-mNVLLAEA~VP 82 (180)
T 1pno_A 12 SAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA--------GRMPGH-MNVLLAEANVP 82 (180)
T ss_dssp CHHHHHHHHHTCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC--------TTSTTH-HHHHHHHTTCC
T ss_pred CHHHHHHHHHhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc--------ccCCCc-ceEEEEeeCCC
Confidence 567889999999999999999853 33333 45555555565542 22222 223211 00000 00 0
Q ss_pred hhh-hccCccccccCCCCEEEEeCCccccHHHHH---HH--------HhcCCceEEEEcCCC--CCCC---C--CCCeeE
Q 041113 146 LDH-ALLSESVKDWIQFDVIIQIGSRITSKRISQ---MI--------EECFPCTYILVDNHP--CRHD---P--SHSVTH 206 (983)
Q Consensus 146 ~g~-~~~~~~~~~~~~aDlvl~iG~~~~~~~~~~---~~--------~~~~~~~~i~id~d~--~~~~---~--~~~~~~ 206 (983)
|+. +-....+..+.+.|++|+||..-.-..... .+ .-++.+++|.+..+- ..-+ + +...+.
T Consensus 83 Yd~v~EMdeIN~df~~tDv~lVIGANDvvNpaA~~dp~SpI~GMPvl~v~kAk~ViV~KRsm~~GyAgv~NpLF~~~nt~ 162 (180)
T 1pno_A 83 YDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTM 162 (180)
T ss_dssp GGGEEEHHHHGGGGGGCSEEEEESCCGGGCGGGTTCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCGGGTSTTEE
T ss_pred HHHHhhHHHHhhhhhhcCEEEEeccccccCchhccCCCCCcCCCeeechhhCCEEEEEECCCCCCcCCCcCcceecCCce
Confidence 010 001123445779999999998632211110 00 111223455554321 1111 1 233456
Q ss_pred EEEcCHHHHHHHHHhcc
Q 041113 207 RIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 207 ~i~~d~~~~l~~L~~~~ 223 (983)
-+.||++..+++|...+
T Consensus 163 MlfGDAK~~~~~l~~~l 179 (180)
T 1pno_A 163 MLFGDAKKMTEQIVQAM 179 (180)
T ss_dssp EEESCHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHh
Confidence 67899999999987643
No 416
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=82.74 E-value=3.2 Score=44.10 Aligned_cols=38 Identities=11% Similarity=0.012 Sum_probs=30.0
Q ss_pred CceEEEeCCC--CCChhhHHHH---HHHhhC-CCEEEEEcCCCC
Q 041113 938 DNILLFLHGF--LGTGEEWIPI---MKAVSG-SARCISIDLPGH 975 (983)
Q Consensus 938 ~~~lv~lHG~--~~~~~~w~~~---~~~l~~-~~~vi~~Dl~G~ 975 (983)
.|+|||+||+ +++...|... .+.+.+ .+.|+++|.++.
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~ 77 (304)
T 1sfr_A 34 SPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQS 77 (304)
T ss_dssp BCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCC
Confidence 6899999999 6788889875 355554 499999999764
No 417
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=82.60 E-value=1.9 Score=51.12 Aligned_cols=106 Identities=13% Similarity=-0.032 Sum_probs=73.3
Q ss_pred hHHHHHhhhhccCceEEEEEccch-hhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDIS-FLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDGs-f~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+-+++++++|++-=|. ..-.+..+.+|.. .++|+++|.-+-....+-+ +..+
T Consensus 81 Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~gia~A~~--~~vPlv~ItG~~~~~~~g~-----------------~~~Q 141 (604)
T 2x7j_A 81 AGFFALGLAKAKQRPVLLICTSGTAAANFYPAVVEAHY--SRVPIIVLTADRPHELREV-----------------GAPQ 141 (604)
T ss_dssp HHHHHHHHHHHHTSCEEEEECSSHHHHTTHHHHHHHHH--HTCCEEEEEEECCGGGSSS-----------------CCTT
T ss_pred HHHHHHHHHHhhCCCEEEEECChhHHHHHHHHHHHHhh--cCCCEEEEeCCCCHHHhCC-----------------CCCC
Confidence 566888887777888888774443 4456789999987 7999999987754421110 1123
Q ss_pred CCCHHHHHHHcCCceeeeCCHHH-------HHHHHHhhh----c-cCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVE-------LEEALSMSQ----H-LGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~e-------L~~aL~~a~----~-~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....+|+++++ +...+++|+ . .+||+.|++..|-
T Consensus 142 ~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d~ 199 (604)
T 2x7j_A 142 AINQHFLFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLRE 199 (604)
T ss_dssp CCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECCS
T ss_pred cCcHHHHhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccCc
Confidence 45666777777777888887775 555555554 3 4699999999874
No 418
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=82.39 E-value=0.57 Score=48.74 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=46.2
Q ss_pred cccCCCCEEEEeCCccccHHHHHHH--HhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhc
Q 041113 156 KDWIQFDVIIQIGSRITSKRISQMI--EECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKV 222 (983)
Q Consensus 156 ~~~~~aDlvl~iG~~~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 222 (983)
..+.+||++|++|+++.-....... ......++|.|+.++...+. ..++.|.+++..+|..|.+.
T Consensus 179 ~~~~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~~~d~--~~~~~i~~~~~~~l~~l~~~ 245 (253)
T 1ma3_A 179 EEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADP--IFDVKIIGKAGEVLPKIVEE 245 (253)
T ss_dssp HHHHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCCTTGG--GCSEEEESCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCCCCCC--ceeEEEeCCHHHHHHHHHHH
Confidence 3457899999999987654433332 12224568889998876643 35888999999999998764
No 419
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=82.38 E-value=2.9 Score=49.02 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=77.5
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++.+|++-=| |..-.+..+.+|.. .++|+++|.-+-....+-. .-+..+
T Consensus 57 Aa~~A~Gyar~tg~pgv~~~TsGpG~~N~~~gi~~A~~--~~vPll~itg~~~~~~~~~---------------~~~~~Q 119 (564)
T 2q28_A 57 AGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATV--NGFPMIMISGSSDRAIVDL---------------QQGDYE 119 (564)
T ss_dssp HHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHHHHHHH--HTCCEEEEEEECCHHHHHT---------------TSCCTT
T ss_pred HHHHHHHHHHHhCCCEEEEEccCchHHHHHHHHHHHHh--cCCCEEEEeCCCCccccCC---------------CCCccc
Confidence 56678888777788877776444 34555788999887 7999999988754321100 001124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
..|...+.+.+-....++++++++...+++|+. .+||+.|++..|
T Consensus 120 ~~dq~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 169 (564)
T 2q28_A 120 ELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPAN 169 (564)
T ss_dssp CCCHHHHHGGGSSEEEECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred cccHHHHHHHhhheeeecCCHHHHHHHHHHHHHHHhcCCCceEEEEcCHH
Confidence 578889999998889999998888777777653 469999999987
No 420
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=82.38 E-value=4.4 Score=43.00 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=79.2
Q ss_pred eEEEEeec-CCCCHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHc---CCCcEE--E
Q 041113 644 IKICALID-SNKSPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKV---GHRIEL--R 705 (983)
Q Consensus 644 i~~~~~~~-~~~~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~---g~~~~l--~ 705 (983)
+|+.+-.. +..+++.+.+.++.+.+.|...+||.=... -+.++=+++|++.|++- |+++.| |
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~AR 168 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIAR 168 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 45544332 224688888889999999999999953210 12334467888887764 777665 5
Q ss_pred EEcCCCCCHHHHHHHHhhcccC--CCceeecCCCChHHHHHHHhhcC-CcEEe
Q 041113 706 VDANRNWTYQEALEFGFLIKDC--DLQYIEEPVQNEEDIIKYCEESG-LPVAL 755 (983)
Q Consensus 706 vDaN~~~~~~~a~~~~~~l~~~--~i~~iEeP~~~~~~~~~l~~~~~-ipIa~ 755 (983)
.|+......++|++.++...+. +..|+|-+- +.++++++.+..+ +|+..
T Consensus 169 TDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~-~~~~~~~i~~~~~~~Pv~~ 220 (307)
T 3lye_A 169 TDALQSLGYEECIERLRAARDEGADVGLLEGFR-SKEQAAAAVAALAPWPLLL 220 (307)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS-CHHHHHHHHHHHTTSCBEE
T ss_pred chhhhccCHHHHHHHHHHHHHCCCCEEEecCCC-CHHHHHHHHHHccCCceeE
Confidence 7887666789999999988765 577998654 5899999998874 78754
No 421
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.37 E-value=5.9 Score=41.87 Aligned_cols=101 Identities=20% Similarity=0.279 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHc---CCCcEE--EEEcCCCCCHHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKV---GHRIEL--RVDANRNWTYQE 716 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~---g~~~~l--~vDaN~~~~~~~ 716 (983)
.+++.+.+.++.+.+.|...+||.=... -+.++=+++|++.+++. ++++.| |.|+......++
T Consensus 92 g~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~glde 171 (302)
T 3fa4_A 92 GGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEE 171 (302)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHH
Confidence 4688888889999999999999852210 13345578888887763 777765 588876678999
Q ss_pred HHHHHhhcccC--CCceeecCCCChHHHHHHHhhc-CCcEEe
Q 041113 717 ALEFGFLIKDC--DLQYIEEPVQNEEDIIKYCEES-GLPVAL 755 (983)
Q Consensus 717 a~~~~~~l~~~--~i~~iEeP~~~~~~~~~l~~~~-~ipIa~ 755 (983)
|++.++...+. +..|+|-+-. .++++++.+.. ++|+..
T Consensus 172 Ai~Ra~ay~eAGAD~ifi~g~~~-~~ei~~~~~~~~~~Pl~~ 212 (302)
T 3fa4_A 172 SVARLRAARDAGADVGFLEGITS-REMARQVIQDLAGWPLLL 212 (302)
T ss_dssp HHHHHHHHHTTTCSEEEETTCCC-HHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHHHHHcCCCEEeecCCCC-HHHHHHHHHHhcCCceeE
Confidence 99999988775 5678887654 89999999887 478755
No 422
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=82.36 E-value=2.1 Score=47.64 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=62.5
Q ss_pred hHHHHHhhhhccCceEEEEEccchhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC-
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH- 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDGsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~- 406 (983)
++.+|+|++++-.|+++...|.|-..| ...|.+++. .++|+++++.+-.+.+.-... + +.+
T Consensus 76 a~~~a~Gaa~aG~r~~~~ts~~G~~~~-~d~l~~aa~--~~~P~Vi~~~~~~~~~~g~~~----------~-----~~~s 137 (395)
T 1yd7_A 76 SIAAAIGASWAGAKAMTATSGPGFSLM-QENIGYAVM--TETPVVIVDVQRSGPSTGQPT----------L-----PAQG 137 (395)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTHHHHH-TTTCC------CCCCEEEEEEC------------------------------
T ss_pred HHHHHHHHHHhCCcEEEEeCchHHHHH-HHHHHHHHh--cCCCEEEEEeeCCCCCCCCCc----------c-----cchh
Confidence 789999999987777777888887664 566776765 789999998887765421000 0 000
Q ss_pred CCCHHHHHH--HcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEE
Q 041113 407 NISIQNLCL--AHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVE 449 (983)
Q Consensus 407 ~~df~~la~--a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~ 449 (983)
+.-....+. .+|.....+.+++|..+.+..|+ +.+.|+++...
T Consensus 138 d~~~~~~~~~g~~g~~vl~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~ 186 (395)
T 1yd7_A 138 DIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTD 186 (395)
T ss_dssp -----------CCCCEEECCCSHHHHHHHHHHHHHHHHHHTSEEEEEEC
T ss_pred HHHHHHhccCCCcceEEEeCCCHHHHHHHHHHHHHHHHHHCCCEEEEcc
Confidence 000112222 35788899999999998888887 45789888764
No 423
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=82.28 E-value=1.3 Score=53.36 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=31.7
Q ss_pred CceEEEeCCCCCChh--hHHHHHHHh-hCCCEEEEEcCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE--EWIPIMKAV-SGSARCISIDLPGHGGSK 979 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--~w~~~~~~l-~~~~~vi~~Dl~G~G~S~ 979 (983)
.|+||++||.+.+.. .|......| ...|.|+++|+||+|.+.
T Consensus 446 ~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g 490 (695)
T 2bkl_A 446 APTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYG 490 (695)
T ss_dssp CCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTC
T ss_pred ccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcC
Confidence 689999999766554 555554444 567999999999988763
No 424
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=82.20 E-value=0.81 Score=43.98 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=73.0
Q ss_pred hhHHHHHHHHhcCCceEEEEccCCC-hhHHH---HHHHHHHhcCCcEE--eccccCccchhhhhhhhhhcccccccc---
Q 041113 74 CQMAEVLELVQGVNKGLLLVGAVHN-EDEIW---AVLHLARHIRWPVV--ADILSGLRLRKLLASFLETEQNILFLD--- 144 (983)
Q Consensus 74 ~~i~~~~~~L~~AkrPvIl~G~g~~-~~~~~---~l~~lae~l~~Pv~--~t~~sg~~~~~~kg~~~~~hp~~~~~g--- 144 (983)
...++++++|..|++.+|+-|+|.. ..+.. ++.++.+..|+-|= -.|-+| -.|. |-+.| +-
T Consensus 34 ~~~~~~a~~l~~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPG-hMNVL-LAEA~ 103 (203)
T 2fsv_C 34 GSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAG--------RMPG-HMNVL-LAEAN 103 (203)
T ss_dssp CCHHHHHHHHHHCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTT-HHHHH-HHHTT
T ss_pred cCHHHHHHHHHhCCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccccc--------CCCC-CccEE-EEEec
Confidence 3567889999999999999999853 33333 45555555565542 222222 2321 11100 00
Q ss_pred -chhhh-ccCccccccCCCCEEEEeCCccccHHHHH---HH--------HhcCCceEEEEcCCC--CCC---CC--CCCe
Q 041113 145 -HLDHA-LLSESVKDWIQFDVIIQIGSRITSKRISQ---MI--------EECFPCTYILVDNHP--CRH---DP--SHSV 204 (983)
Q Consensus 145 -~~g~~-~~~~~~~~~~~aDlvl~iG~~~~~~~~~~---~~--------~~~~~~~~i~id~d~--~~~---~~--~~~~ 204 (983)
-|+.. -....+..+.+.|++|+||..-.-..... .+ .-++.+++|.+..+- ..- ++ +...
T Consensus 104 VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~kAk~ViV~KRsm~~GyAgv~NpLF~~~n 183 (203)
T 2fsv_C 104 VPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVWKAGTVLFIKRSMASGYAGVENELFFRNN 183 (203)
T ss_dssp CCGGGEEEHHHHGGGSTTCSEEEEESCCGGGCGGGTSCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCGGGGSTT
T ss_pred CCHHHHhhHHHHhhhhhhcCEEEEeccccccCchhhcCCCCCcCCCeeeccccCCEEEEEECCCCCCcCCCcCcceecCC
Confidence 01100 01133445789999999998632211110 00 111223455554322 111 11 2334
Q ss_pred eEEEEcCHHHHHHHHHhcc
Q 041113 205 THRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 205 ~~~i~~d~~~~l~~L~~~~ 223 (983)
+.-+.||++..+++|...+
T Consensus 184 t~MlfGDAK~~~~~l~~~l 202 (203)
T 2fsv_C 184 TMMLFGDAKKMTEQIVQAM 202 (203)
T ss_dssp EEEEESCHHHHHHHHHHHC
T ss_pred ceEEeccHHHHHHHHHHHh
Confidence 5667899999999988654
No 425
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=82.18 E-value=2 Score=50.01 Aligned_cols=106 Identities=13% Similarity=0.039 Sum_probs=74.0
Q ss_pred hHHHHHhhhhccCceEEEEEcc-chhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGD-ISFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GD-Gsf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++++|++-= -|..-.++.+.++.. .++|+++|.-+-....+-+ +..+
T Consensus 50 Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~~A~~--~~~Pll~itg~~~~~~~~~-----------------~~~q 110 (528)
T 1q6z_A 50 VVGIADGYAQASRKPAFINLHSAAGTGNAMGALSNAWN--SHSPLIVTAGQQTRAMIGV-----------------EALL 110 (528)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHHHHHH--TTCCEEEEEEECCHHHHTT-----------------TCTT
T ss_pred HHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHHHHhh--cCCCEEEEeCCCcccccCC-----------------Cccc
Confidence 6678889888888887775533 344456789999877 8999999887755432110 0012
Q ss_pred C-CCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcCc
Q 041113 407 N-ISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESCI 452 (983)
Q Consensus 407 ~-~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~~ 452 (983)
. +|...+.+.+-....++++++++...+.+|+. .+||+.|++..|-
T Consensus 111 ~~~d~~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d~ 162 (528)
T 1q6z_A 111 TNVDAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDD 162 (528)
T ss_dssp CCTTGGGSSTTSCSCEECCSSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGGG
T ss_pred ccccHHHHHHHhhHhhhcCCCHHHHHHHHHHHHHHHhcCCCCcEEEEechhh
Confidence 2 46777777776678888888887777776653 3589999999875
No 426
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=82.09 E-value=4.6 Score=47.35 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=75.0
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++ +++|++-=| |..-.++.+.+|.. .++|+++|.-+-.....-+. .......+...
T Consensus 53 Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~A~~--~~vPll~itg~~~~~~~~~~---------~~~~~~~g~~~ 120 (568)
T 2wvg_A 53 CGFSAEGYARAKG-AAAAVVTYSVGALSAFDAIGGAYA--ENLPVILISGAPNNNDHAAG---------HVLHHALGKTD 120 (568)
T ss_dssp HHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHHHHHH--TTCCEEEEEEECCGGGTTTT---------CBCTTSCSSSC
T ss_pred HHHHHHHHHHhhC-CeEEEEeCCCCHHHHHHHHHHHhh--hCCCEEEEeCCCChhHhccC---------cceeeeccccc
Confidence 5678888877777 877776433 33445788888877 89999999887665422110 00000001111
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....++++++++...+++|+ ...||+.|++..|-
T Consensus 121 ~~d~~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~A~~~~GPV~l~iP~dv 170 (568)
T 2wvg_A 121 YHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKPVYLEIACNI 170 (568)
T ss_dssp CCHHHHHHTTSCSCEEEECSGGGHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred hHHHHHHHHhhEeEEEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhH
Confidence 23678888888888999999887766666554 44699999999875
No 427
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=81.79 E-value=4 Score=47.82 Aligned_cols=113 Identities=11% Similarity=0.012 Sum_probs=74.8
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++ +.+|++-=| |..-.++.+.+|.. .++|+++|.-+-.....-+. .......+...
T Consensus 53 Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~A~~--~~vPll~itg~~~~~~~~~~---------~~~~~~~g~~~ 120 (566)
T 2vbi_A 53 CGFSAEGYARSNG-AAAAVVTFSVGAISAMNALGGAYA--ENLPVILISGAPNSNDQGTG---------HILHHTIGKTD 120 (566)
T ss_dssp HHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHHHHHH--TTCCEEEEEEECCGGGTTTT---------CBCTTSCSSSC
T ss_pred HHHHHHHHHhhcC-CeEEEEeCCCCHHHHHHHHHHHHh--hCCCEEEEECCCChHHhccC---------ceeeeeccCcc
Confidence 6678888887777 877776433 24445788998877 89999999887654322110 00000001111
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....++++++++...+++|+ ...||+.|++..|-
T Consensus 121 ~~d~~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~a~~~~GPV~l~iP~d~ 170 (566)
T 2vbi_A 121 YSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNI 170 (566)
T ss_dssp CTHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHHHHTCCEEEEEETTT
T ss_pred hHHHHHHHhhhEeEEEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 23788888988888889998877666666554 44699999999774
No 428
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=81.52 E-value=17 Score=37.84 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC------CChHHHHHHHHHHHHHc---CCCcEEE--EEcCCC---C----CHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR------ADPIKDAEVIQEVRKKV---GHRIELR--VDANRN---W----TYQ 715 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~------~~~~~d~~~v~~vr~~~---g~~~~l~--vDaN~~---~----~~~ 715 (983)
.+++++.+-++++.+.|...+||.=+.. -+.++=+++|++++++- |.++.|. -|+... . ..+
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 4789999999999999999999974420 12345578888888773 5665554 566432 1 368
Q ss_pred HHHHHHhhcccCC--CceeecCCCChHHHHHHHhhcCCcEEeC
Q 041113 716 EALEFGFLIKDCD--LQYIEEPVQNEEDIIKYCEESGLPVALD 756 (983)
Q Consensus 716 ~a~~~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~ipIa~d 756 (983)
++++.++.+++.| ..|+|-+ ++.+..+++.+..++|+..-
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~-~~~~~~~~i~~~~~~P~n~~ 210 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLA-LQSQDIRALADALRVPLNVM 210 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTC-CCHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCC-CCHHHHHHHHHhcCCCEEEe
Confidence 9999999988754 5688885 55899999999999998543
No 429
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=81.33 E-value=0.83 Score=43.02 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=73.0
Q ss_pred hHHHHHHHHhcCCceEEEEccCCC-hhHH---HHHHHHHHhcCCcEE--eccccCccchhhhhhhhhhcccccccc----
Q 041113 75 QMAEVLELVQGVNKGLLLVGAVHN-EDEI---WAVLHLARHIRWPVV--ADILSGLRLRKLLASFLETEQNILFLD---- 144 (983)
Q Consensus 75 ~i~~~~~~L~~AkrPvIl~G~g~~-~~~~---~~l~~lae~l~~Pv~--~t~~sg~~~~~~kg~~~~~hp~~~~~g---- 144 (983)
..++++++|..|++.+|+-|+|.. ..+. .++.++.+..|+-|= -.|-+| -.|.. =+.| +-
T Consensus 11 ~~~~~a~~l~~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGh-MNVL-LAEA~V 80 (184)
T 1d4o_A 11 NLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVAG--------RMPGQ-LNVL-LAEAGV 80 (184)
T ss_dssp CHHHHHHHHHHCSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTTH-HHHH-HHHHTC
T ss_pred CHHHHHHHHHhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc--------cCCCc-ceEE-EEEecC
Confidence 467888999999999999999843 3333 355555555565542 222222 22211 0000 00
Q ss_pred chhhh-ccCccccccCCCCEEEEeCCccccHHHHHHHH-----------hcCCceEEEEcCCC--CCCC---C--CCCee
Q 041113 145 HLDHA-LLSESVKDWIQFDVIIQIGSRITSKRISQMIE-----------ECFPCTYILVDNHP--CRHD---P--SHSVT 205 (983)
Q Consensus 145 ~~g~~-~~~~~~~~~~~aDlvl~iG~~~~~~~~~~~~~-----------~~~~~~~i~id~d~--~~~~---~--~~~~~ 205 (983)
-|+.. -....+..+.+.|++|+||..-.-.....-.+ -+..+++|.+..+- ..-+ + +...+
T Consensus 81 PYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvl~v~kAk~ViV~KRsm~~GyAgv~NpLF~~~nt 160 (184)
T 1d4o_A 81 PYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNT 160 (184)
T ss_dssp CGGGEEEHHHHGGGGGGCSEEEEESCSGGGCTHHHHCTTSTTTTCCCCCGGGSSCEEEEESSSCCCTTCCCCGGGGSTTE
T ss_pred CHHHHHhHHHHhhhhhhcCEEEEecCCccCCCccccCCCCCccCCeeeehhhCCEEEEEECCCCCCcCCCcCcceecCCc
Confidence 00000 01133445779999999998743322221100 11123455554321 1111 1 13345
Q ss_pred EEEEcCHHHHHHHHHhcc
Q 041113 206 HRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 206 ~~i~~d~~~~l~~L~~~~ 223 (983)
.-+.||++..+++|...+
T Consensus 161 ~MlfGDAK~~~~~l~~~l 178 (184)
T 1d4o_A 161 AMLLGDAKKTCDALQAKV 178 (184)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred eEEeccHHHHHHHHHHHH
Confidence 667999999999988765
No 430
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=81.11 E-value=2.8 Score=49.58 Aligned_cols=106 Identities=14% Similarity=0.030 Sum_probs=74.4
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+-+++++.+|++-=| |....+..+.+|.. .++|+++|.-.-....+-+ +..+
T Consensus 62 Aa~aA~GyAr~tg~~gv~~~TsGpG~~N~~~gia~A~~--~~vPvl~itG~~~~~~~~~-----------------~~~Q 122 (603)
T 4feg_A 62 GAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGLYDARE--DHVPVLALIGQFGTTGMNM-----------------DTFQ 122 (603)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHHHHHH--TTCCEEEEEEECCTTTTTS-----------------CCTT
T ss_pred HHHHHHHHHHHhCCceEEEecCCchHHHHHHHHHHHHH--cCCCEEEEecCCcccccCC-----------------Cccc
Confidence 56678888777788888876433 34556789999987 8999999887654321110 0123
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcCc
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESCI 452 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~~ 452 (983)
..|...+.+.+-....++.+++++...+.+|+ ..+||+.|+|..|-
T Consensus 123 ~~d~~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~dv 172 (603)
T 4feg_A 123 EMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQGVAVVQIPVDL 172 (603)
T ss_dssp CCCCGGGGTTTCSEEEECCCSTTHHHHHHHHHHHHHHHTSEEEEEEETTG
T ss_pred cccHHHHhhhhceEEEEcCCHHHHHHHHHHHHHHHhcCCCCEEEEeChhh
Confidence 45677777777778888988887766666654 45899999999874
No 431
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=81.07 E-value=0.85 Score=43.95 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=73.4
Q ss_pred hHHHHHHHHhcCCceEEEEccCCC-hhHHH---HHHHHHHhcCCcEE--eccccCccchhhhhhhhhhcccccccc----
Q 041113 75 QMAEVLELVQGVNKGLLLVGAVHN-EDEIW---AVLHLARHIRWPVV--ADILSGLRLRKLLASFLETEQNILFLD---- 144 (983)
Q Consensus 75 ~i~~~~~~L~~AkrPvIl~G~g~~-~~~~~---~l~~lae~l~~Pv~--~t~~sg~~~~~~kg~~~~~hp~~~~~g---- 144 (983)
..++++++|..|++.+|+-|+|.. ..+.. ++.++.+..|+-|= -.|-+| -.|. |-+.| +-
T Consensus 34 ~~~~~a~~l~~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPG-hMNVL-LAEA~V 103 (207)
T 1djl_A 34 NLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAG--------RMPG-QLNVL-LAEAGV 103 (207)
T ss_dssp CHHHHHHHHHHCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTT-HHHHH-HHHTTC
T ss_pred CHHHHHHHHHhCCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccCC--------CCCC-CCcEE-EEEeCC
Confidence 457888999999999999999853 33333 45555555565542 222222 2321 11100 00
Q ss_pred chhhh-ccCccccccCCCCEEEEeCCccccHHHHHHHH-----------hcCCceEEEEcCCC--CCCC---C--CCCee
Q 041113 145 HLDHA-LLSESVKDWIQFDVIIQIGSRITSKRISQMIE-----------ECFPCTYILVDNHP--CRHD---P--SHSVT 205 (983)
Q Consensus 145 ~~g~~-~~~~~~~~~~~aDlvl~iG~~~~~~~~~~~~~-----------~~~~~~~i~id~d~--~~~~---~--~~~~~ 205 (983)
-|+.. -....+..+.+.|++|+||..-.-.....-.+ -++.+++|.+..+- ..-+ + +...+
T Consensus 104 PYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~kAk~ViV~KRsm~~GyAgv~NpLF~~~nt 183 (207)
T 1djl_A 104 PYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNT 183 (207)
T ss_dssp CGGGEEEHHHHGGGGGGCSEEEEESCCGGGCTHHHHCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCGGGGSTTE
T ss_pred CHHHHhhHHHHhhhhhhcCEEEEeccccccCCccccCCCCCccCCeeecceecCEEEEEECCCCCCcCCCcCcceecCCc
Confidence 00100 01123445779999999998743322221100 11123455554322 1111 1 23345
Q ss_pred EEEEcCHHHHHHHHHhcc
Q 041113 206 HRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 206 ~~i~~d~~~~l~~L~~~~ 223 (983)
.-+.||++..+++|...+
T Consensus 184 ~MlfGDAK~~~~~l~~~l 201 (207)
T 1djl_A 184 AMLLGDAKKTCDALQAKV 201 (207)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred eEEeccHHHHHHHHHHHH
Confidence 667999999999998765
No 432
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=80.90 E-value=8.2 Score=38.63 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=93.9
Q ss_pred CCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCce
Q 041113 652 SNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQY 731 (983)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~ 731 (983)
...++++....++.+++.|++.+.+-.-. ..-.+.|+++++.+ |++ .|=+.--.|.+++.+..+ .|-.|
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~t----~~a~~~I~~l~~~~-p~~--~IGAGTVlt~~~a~~ai~----AGA~f 88 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLRT----EAGLAAISAIKKAV-PEA--IVGAGTVCTADDFQKAID----AGAQF 88 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETTS----TTHHHHHHHHHHHC-TTS--EEEEECCCSHHHHHHHHH----HTCSE
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCCC----ccHHHHHHHHHHHC-CCC--eEeeccccCHHHHHHHHH----cCCCE
Confidence 34678899999999999999999997643 23567788999999 664 444556668888776654 46667
Q ss_pred eecCCCChHHHHHHHhhcCC------cEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC-cCCHHHHHHHHHHHHHc
Q 041113 732 IEEPVQNEEDIIKYCEESGL------PVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV-IGGFENAGLIARWAQRH 804 (983)
Q Consensus 732 iEeP~~~~~~~~~l~~~~~i------pIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~-~GGl~~~~~~~~~A~~~ 804 (983)
+=-|.- ..++.+..++.++ |+..|=. +.. ......+.|+|++.+=|.. .||+.-...+..-. -
T Consensus 89 ivsP~~-~~evi~~~~~~~v~~~~~~~~~PG~~--Tpt-----E~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~--p 158 (217)
T 3lab_A 89 IVSPGL-TPELIEKAKQVKLDGQWQGVFLPGVA--TAS-----EVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPF--P 158 (217)
T ss_dssp EEESSC-CHHHHHHHHHHHHHCSCCCEEEEEEC--SHH-----HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTC--T
T ss_pred EEeCCC-cHHHHHHHHHcCCCccCCCeEeCCCC--CHH-----HHHHHHHcCCCEEEECccccccCHHHHHHHHhhh--c
Confidence 767876 4455555556688 8888653 322 2455566799998887755 67764433333222 2
Q ss_pred CCcEEeCC
Q 041113 805 GKMAVVSA 812 (983)
Q Consensus 805 gi~~~~~~ 812 (983)
+++++..+
T Consensus 159 ~i~~~ptG 166 (217)
T 3lab_A 159 DIQFCPTG 166 (217)
T ss_dssp TCEEEEBS
T ss_pred CceEEEeC
Confidence 57766444
No 433
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=80.74 E-value=0.87 Score=47.21 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=45.8
Q ss_pred ccCCCCEEEEeCCccccHHHHHHH--HhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMI--EECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKV 222 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 222 (983)
.+++||++|++|+++.-....... ......++|.|+.++...+. ..++.|.+++.+++..|.+.
T Consensus 174 ~~~~adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~~d~--~~~~~i~~~~~~~l~~l~~~ 239 (249)
T 1m2k_A 174 EVERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETPLTP--IADYSLRGKAGEVMDELVRH 239 (249)
T ss_dssp HHHHCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCCTTGG--GCSEEECSCHHHHHHHHHHH
T ss_pred HHhcCCEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCc--ceeEEEeCCHHHHHHHHHHH
Confidence 456899999999987654433221 22234568889998876643 35788999999999998754
No 434
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=80.45 E-value=3.2 Score=48.70 Aligned_cols=107 Identities=10% Similarity=0.048 Sum_probs=76.8
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++.+|++-=| |..-.+..+.+|.. .++|+++|.-+-....+-. .-+..+
T Consensus 59 Aa~~A~GyAr~tg~pgv~~~TsGpG~~N~~~~i~~A~~--~~vPll~itg~~~~~~~~~---------------~~~~~Q 121 (568)
T 2c31_A 59 AGYAASIAGYIEGKPGVCLTVSAPGFLNGVTSLAHATT--NCFPMILLSGSSEREIVDL---------------QQGDYE 121 (568)
T ss_dssp HHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHHHHHHH--HTCCEEEEEEECCHHHHHT---------------TCCCTT
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCccHHHHHHHHHHHHh--cCCCEEEEccCCCccccCC---------------CCCccc
Confidence 56678888777788877776444 34556788999887 7999999988754321110 001124
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
..|...+.+.+-....++++++++...+++|+. .+||+.|++..|
T Consensus 122 ~~dq~~~~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (568)
T 2c31_A 122 EMDQMNVARPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAK 171 (568)
T ss_dssp CCCHHHHSGGGSSEEEECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEETH
T ss_pred ccCHHHHHHhhhheeeecCCHHHHHHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 468888888888888999998888777777653 468999999987
No 435
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=80.41 E-value=3.9 Score=48.21 Aligned_cols=105 Identities=10% Similarity=0.022 Sum_probs=71.5
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++++++|++-=| |..-.+..+.+|.. .++|+++|.-+-....+-+. . ..+
T Consensus 55 Aa~~A~GyAr~tg~p~v~~~TsGpG~~N~~~gv~~A~~--~~vPll~itg~~~~~~~~~~-------------~---~~Q 116 (589)
T 2pgn_A 55 GAWMVNGYNYVKDRSAAVGAWHCVGNLLLHAAMQEART--GRIPAVHIGLNSDGRLAGRS-------------E---AAQ 116 (589)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEEGGGGGGCHHHHHHHHH--TTCCEEEEEEESCGGGTTCT-------------T---CSS
T ss_pred HHHHHHHHHHHHCCCEEEEEecCchHHHHHHHHHHHHh--cCCCEEEEecCCcccccCCC-------------C---ccc
Confidence 56788888777777766655333 34556899999987 89999999877654322100 0 123
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhc-----cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQH-----LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~-----~~~p~lIeV~~~ 451 (983)
..|... .+.+-....++++++++...+++|+. .+||+.|++..|
T Consensus 117 ~~d~~~-~~~~tk~~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 117 QVPWQS-FTPIARSTQRVERLDKVGEAIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp CCCGGG-GTTTSSEEEECCSGGGHHHHHHHHHHHHTSSSCCEEEEEEETH
T ss_pred ccChhh-ccccEEEEeecCCHHHHHHHHHHHHHHHhcCCCccEEEEeCHh
Confidence 345555 55555678889998888777777653 358999999876
No 436
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=80.23 E-value=3.1 Score=44.57 Aligned_cols=124 Identities=11% Similarity=0.209 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHhhh-cCCCEEEEeccCC----------CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHh
Q 041113 654 KSPVEVASIATTLVE-EGFTAIKLKVARR----------ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGF 722 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~-~G~~~~KiKig~~----------~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~ 722 (983)
.+++++.+.++.+.+ .||..+.+.++.+ .+++.-.+.++++|+.++-.+.+.+=. .|+ +..++++
T Consensus 108 ~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~--~~~--~~~~~a~ 183 (311)
T 1ep3_A 108 SEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSP--NVT--DIVPIAK 183 (311)
T ss_dssp SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS--CSS--CSHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC--ChH--HHHHHHH
Confidence 467888888877777 8999999987632 023334778999999874333333322 232 2234445
Q ss_pred hcccCCCceeec---------------C--------CCC-------hHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHh
Q 041113 723 LIKDCDLQYIEE---------------P--------VQN-------EEDIIKYCEESGLPVALDETIDKFQKDPLNMLEK 772 (983)
Q Consensus 723 ~l~~~~i~~iEe---------------P--------~~~-------~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~ 772 (983)
.+++.++.+|-= | +.. .+.++++++.+.+||.+.=-+.+..+ ...
T Consensus 184 ~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d-----~~~ 258 (311)
T 1ep3_A 184 AVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQD-----VLE 258 (311)
T ss_dssp HHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHH-----HHH
T ss_pred HHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHH-----HHH
Confidence 555555554431 1 000 24456777778899988877776543 444
Q ss_pred hcCCCceEEEEcCC
Q 041113 773 YAHPGIVAIVIKPS 786 (983)
Q Consensus 773 ~~~~~~~~i~~k~~ 786 (983)
+++.|+|.+++--.
T Consensus 259 ~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 259 MYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHTCSEEEECTH
T ss_pred HHHcCCCEEEECHH
Confidence 45567888876443
No 437
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=80.22 E-value=0.86 Score=49.14 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=47.0
Q ss_pred ccCCCCEEEEeCCccccHHHHHHH--HhcCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMI--EECFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~--~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
.+.+||++|++|+++.-+...++. ......+++.|+.++...+ ...++.|.+++.+++..|.+.+
T Consensus 203 ~~~~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT~~d--~~adl~i~g~a~evl~~L~~~L 269 (355)
T 3pki_A 203 ASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHD--RHADLRIHGYVDEVMTRLMEHL 269 (355)
T ss_dssp HHHHCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCCTTG--GGCSEEECSCHHHHHHHHHHHT
T ss_pred HHhcCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCCCCC--CccCEEEeCCHHHHHHHHHHHh
Confidence 457899999999998654433321 1223346788998886554 3567889999999999998765
No 438
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=79.96 E-value=1.8 Score=47.32 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=46.0
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHhcC-CceEEEEcCCCCC-CC-CCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEECF-PCTYILVDNHPCR-HD-PSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~~~-~~~~i~id~d~~~-~~-~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
.+.+||++|+||+++.-+....+..... ..++|.|+.++.. +. .....++.|.+|+..++..|.+.+
T Consensus 216 ~~~~aDllLviGTSl~V~Paa~l~~~~~~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~L 285 (361)
T 1q14_A 216 KHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 285 (361)
T ss_dssp ---CCCEEEEESCCCCSTTGGGHHHHSCTTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHH
T ss_pred hhccCCEEEEECCCCCchhHHHHHHHHhcCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHHc
Confidence 3568999999999987655544444433 3367788887752 10 123467889999999999998765
No 439
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=79.87 E-value=4.8 Score=40.87 Aligned_cols=138 Identities=11% Similarity=0.041 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHhhhcCCCEEEEec--cC--CCChHHHHHHHHHHHHHcCCCcEEEE--EcCCCCCHHHHHHHHhhcccCC
Q 041113 655 SPVEVASIATTLVEEGFTAIKLKV--AR--RADPIKDAEVIQEVRKKVGHRIELRV--DANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 655 ~~~~~~~~~~~~~~~G~~~~KiKi--g~--~~~~~~d~~~v~~vr~~~g~~~~l~v--DaN~~~~~~~a~~~~~~l~~~~ 728 (983)
..+....++++.++.|+..+.+-+ |. ..+.+.-.+.+++++++.+ .+.+.+ .. ..|+.++..+.++.+.+.|
T Consensus 68 ~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~-~~l~~~~~~~~a~~a~eaG 145 (225)
T 1mzh_A 68 KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVET-PYLNEEEIKKAVEICIEAG 145 (225)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCG-GGCCHHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeC-CCCCHHHHHHHHHHHHHhC
Confidence 345555667788889999999544 32 0133444566889999886 455544 32 3589999999999999889
Q ss_pred CceeecCC------CChHHHHHHHhhc--CCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHH
Q 041113 729 LQYIEEPV------QNEEDIIKYCEES--GLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARW 800 (983)
Q Consensus 729 i~~iEeP~------~~~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~ 800 (983)
..++---. .+++..+.+++.. ++||.+.=-+.+..| +..+++.|++.+- ....+++.+-
T Consensus 146 ad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~d-----a~~~l~aGA~~iG--------~s~~~~i~~~ 212 (225)
T 1mzh_A 146 ADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLET-----AISMIEAGADRIG--------TSSGISIAEE 212 (225)
T ss_dssp CSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHH-----HHHHHHTTCSEEE--------ESCHHHHHHH
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHH-----HHHHHHhCchHHH--------HccHHHHHHH
Confidence 88884332 1567788888766 688777666666542 4445556787432 2334455555
Q ss_pred HHHcCCc
Q 041113 801 AQRHGKM 807 (983)
Q Consensus 801 A~~~gi~ 807 (983)
.++.++-
T Consensus 213 ~~~~~~~ 219 (225)
T 1mzh_A 213 FLKRHLI 219 (225)
T ss_dssp HHHHHHH
T ss_pred HHhcccc
Confidence 5555443
No 440
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=79.84 E-value=2.8 Score=49.03 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=73.5
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+-+++++.+|++-=| |..-.+..+.+|.. .++|+++|.-+-....+-+ +..+
T Consensus 58 Aa~~AdGyAr~tG~pgv~~~TsGpG~~N~~~gia~A~~--d~vPll~itG~~~~~~~g~-----------------~~~Q 118 (556)
T 3hww_A 58 LGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGL--TGEKLILLTADRPPELIDC-----------------GANQ 118 (556)
T ss_dssp HHHHHHHHHHHHCSCEEEEECSSHHHHTTHHHHHHHHH--HCCCEEEEEEECCGGGSSS-----------------SCTT
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcHHHhhhHHHHHHHH--hCCCeEEEeCCCCHHHhcc-----------------CCCc
Confidence 56678888777788888876444 45556789999987 7999998887655332110 0123
Q ss_pred CCCHHHHHHHcCCceeeeCCHH------HHHHHHHhhhc--cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKV------ELEEALSMSQH--LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~------eL~~aL~~a~~--~~~p~lIeV~~~ 451 (983)
..|...+.+.+-...+.+.+++ ++..++++|+. .+||+.|++..|
T Consensus 119 ~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~~i~~A~~~~r~GPV~i~iP~d 171 (556)
T 3hww_A 119 AIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFA 171 (556)
T ss_dssp CCCCTTTTTTCSSEEEECCCCCTTSCHHHHHHHHHHHHHSCCSSCEEEEEECC
T ss_pred cccHHHHHhhheeEEEecCCCcccccHHHHHHHHHHHHhcCCCCCEEEeCCcC
Confidence 4566666666666677777664 48889999875 358999999986
No 441
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=79.71 E-value=15 Score=38.62 Aligned_cols=100 Identities=10% Similarity=0.108 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC-----------CChHHHHHHHHHHHHHc-CCCcEE--EEEcCCCCCHHHHHH
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR-----------ADPIKDAEVIQEVRKKV-GHRIEL--RVDANRNWTYQEALE 719 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~-----------~~~~~d~~~v~~vr~~~-g~~~~l--~vDaN~~~~~~~a~~ 719 (983)
.+++++.+-++++.+.|...+||.=+.. -+.++=+++|++++++- ++++.| |-|+ .....+++++
T Consensus 94 g~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~ 172 (287)
T 3b8i_A 94 GNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQ 172 (287)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHH
Confidence 4889999999999999999999974421 12235578899988873 345444 5798 7778899999
Q ss_pred HHhhcccCC--CceeecCCCChHHHHHHHhhcCCcEEe
Q 041113 720 FGFLIKDCD--LQYIEEPVQNEEDIIKYCEESGLPVAL 755 (983)
Q Consensus 720 ~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~ipIa~ 755 (983)
.++.+++.| ..|+|-+ ++.+.++++.+..++|+..
T Consensus 173 Ra~ay~eAGAd~i~~e~~-~~~~~~~~i~~~~~~P~ii 209 (287)
T 3b8i_A 173 RTLAYQEAGADGICLVGV-RDFAHLEAIAEHLHIPLML 209 (287)
T ss_dssp HHHHHHHTTCSEEEEECC-CSHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHcCCCEEEecCC-CCHHHHHHHHHhCCCCEEE
Confidence 999998864 5689974 5589999999999999874
No 442
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=78.22 E-value=1.7 Score=50.72 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=94.2
Q ss_pred HHHHHHHhhhcCCCEEEEeccCCCChHH-------------HHHHHHHHHHHcCC-CcEEEEEcC---------------
Q 041113 659 VASIATTLVEEGFTAIKLKVARRADPIK-------------DAEVIQEVRKKVGH-RIELRVDAN--------------- 709 (983)
Q Consensus 659 ~~~~~~~~~~~G~~~~KiKig~~~~~~~-------------d~~~v~~vr~~~g~-~~~l~vDaN--------------- 709 (983)
+.+.++++.+.|...+ -+|. ..-. +.+.++++.+.+|. .+.+.+|+.
T Consensus 349 ~~~~a~~~l~aGad~V--~igt--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~ 424 (555)
T 1jvn_A 349 ALEVASLYFRSGADKV--SIGT--DAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVF 424 (555)
T ss_dssp HHHHHHHHHHHTCSEE--EECH--HHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCE
T ss_pred HHHHHHHHHHcCCCEE--EECC--HHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccc
Confidence 3456777788897754 4443 1122 24679999999984 578899983
Q ss_pred --------C-----------CCCH---HHHHHHHhhcccCCCceee-cCC--------CChHHHHHHHhhcCCcEEeCCC
Q 041113 710 --------R-----------NWTY---QEALEFGFLIKDCDLQYIE-EPV--------QNEEDIIKYCEESGLPVALDET 758 (983)
Q Consensus 710 --------~-----------~~~~---~~a~~~~~~l~~~~i~~iE-eP~--------~~~~~~~~l~~~~~ipIa~dEs 758 (983)
+ +|+. -++.++++.+++++...|= ... +|++-++++++.+++||.+.=-
T Consensus 425 ~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIasGG 504 (555)
T 1jvn_A 425 ETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSG 504 (555)
T ss_dssp ECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEECSC
T ss_pred cccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEEECC
Confidence 2 2422 2356777777777654331 111 1578889999999999888766
Q ss_pred ccCcCCChHHHHHhhcC-CCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcE
Q 041113 759 IDKFQKDPLNMLEKYAH-PGIVAIVIKPSVIGGFENAGLIARWAQRHGKMA 808 (983)
Q Consensus 759 ~~~~~~~~~~~~~~~~~-~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~ 808 (983)
+.+..| +..+.+ .|++.+.+=-...+|-....++.+.++..|+++
T Consensus 505 i~s~~d-----~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 505 AGVPEH-----FEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp CCSHHH-----HHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCC
T ss_pred CCCHHH-----HHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 777643 555554 688887765555666666777888889999974
No 443
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=78.02 E-value=8.7 Score=41.01 Aligned_cols=149 Identities=17% Similarity=0.075 Sum_probs=93.4
Q ss_pred HHHHHHHHhh-hcCCCEEEEecc-C-C----CChHHHHHHHHHHHHHcCCCcEEEEE--cCCCCCHHHHHHHHhhcccC-
Q 041113 658 EVASIATTLV-EEGFTAIKLKVA-R-R----ADPIKDAEVIQEVRKKVGHRIELRVD--ANRNWTYQEALEFGFLIKDC- 727 (983)
Q Consensus 658 ~~~~~~~~~~-~~G~~~~KiKig-~-~----~~~~~d~~~v~~vr~~~g~~~~l~vD--aN~~~~~~~a~~~~~~l~~~- 727 (983)
+..+.+++++ +.|...+-|..- . + -++++..++|++|++.+ ++.|.|| .|..++++-+.+.++.....
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~--~vPlsIDg~~~~T~~~eV~eaAleagag~~ 158 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV--GVPLVVVGCGDVEKDHEVLEAVAEAAAGEN 158 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC--CSCEEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC--CceEEEECCCCCCCCHHHHHHHHHhcCCCC
Confidence 3566777777 889999888632 1 1 12346778899999876 7999999 55566777776666666442
Q ss_pred CC-ceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCc--eEEEEcCCCc--C-CHHHHHHHHHHH
Q 041113 728 DL-QYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGI--VAIVIKPSVI--G-GFENAGLIARWA 801 (983)
Q Consensus 728 ~i-~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~--~~i~~k~~~~--G-Gl~~~~~~~~~A 801 (983)
++ .-+..- +++.+..+..+.+.|+++=-. .+.. ...+....+.+.|+ +.|.+||... | |+...+.+.+..
T Consensus 159 ~lINsv~~~--~~~~m~~laa~~g~~vVlmh~-~d~~-~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~i 234 (323)
T 4djd_D 159 LLLGNAEQE--NYKSLTAACMVHKHNIIARSP-LDIN-ICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERI 234 (323)
T ss_dssp CEEEEEBTT--BCHHHHHHHHHHTCEEEEECS-SCHH-HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHH
T ss_pred CeEEECCcc--cHHHHHHHHHHhCCeEEEEcc-chHH-HHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHH
Confidence 22 223321 257788888889999887211 1111 01122234456677 6689999873 3 666666655555
Q ss_pred H--------HcCCcEEeCC
Q 041113 802 Q--------RHGKMAVVSA 812 (983)
Q Consensus 802 ~--------~~gi~~~~~~ 812 (983)
+ ..|+++.++.
T Consensus 235 r~~al~~~~~lg~PvL~Gv 253 (323)
T 4djd_D 235 RLGALQGDKMLSMPVICTV 253 (323)
T ss_dssp HHHHHHTCGGGCSCBEEEH
T ss_pred HHHhhcccccCCCCEEEec
Confidence 4 4688877653
No 444
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=77.83 E-value=1.1 Score=45.05 Aligned_cols=95 Identities=13% Similarity=0.036 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHhhcccCCCceeecCCCC---hHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC
Q 041113 711 NWTYQEALEFGFLIKDCDLQYIEEPVQN---EEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV 787 (983)
Q Consensus 711 ~~~~~~a~~~~~~l~~~~i~~iEeP~~~---~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~ 787 (983)
..+++++.++++.|-+-++.++|=++.+ .+.+++++++.+-++.+--++.+.. .++..++.|+++++. |.
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~-----~a~~ai~AGA~fivs-P~- 93 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTAD-----DFQKAIDAGAQFIVS-PG- 93 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHH-----HHHHHHHHTCSEEEE-SS-
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHH-----HHHHHHHcCCCEEEe-CC-
Confidence 3478899999999999999999999873 4566888887765555445666643 577788889988764 22
Q ss_pred cCCHHHHHHHHHHHHHcCC------cEEeCCCCchH
Q 041113 788 IGGFENAGLIARWAQRHGK------MAVVSAAFESG 817 (983)
Q Consensus 788 ~GGl~~~~~~~~~A~~~gi------~~~~~~~~es~ 817 (983)
+ ..++++.|+++|+ +++.+.+..+-
T Consensus 94 ---~--~~evi~~~~~~~v~~~~~~~~~PG~~TptE 124 (217)
T 3lab_A 94 ---L--TPELIEKAKQVKLDGQWQGVFLPGVATASE 124 (217)
T ss_dssp ---C--CHHHHHHHHHHHHHCSCCCEEEEEECSHHH
T ss_pred ---C--cHHHHHHHHHcCCCccCCCeEeCCCCCHHH
Confidence 2 3468889999999 98777664443
No 445
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=77.02 E-value=11 Score=37.69 Aligned_cols=149 Identities=15% Similarity=0.176 Sum_probs=85.9
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhh
Q 041113 644 IKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFL 723 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~ 723 (983)
.++..++ ...+++++.+.++++.+.|.+.+-+.... + ..++.++++++.++ +.+++-+..-.+.+++...
T Consensus 7 ~~i~~~i-~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~-~~~~~i~~i~~~~~--~~l~vg~g~~~~~~~i~~a--- 76 (212)
T 2v82_A 7 LPLIAIL-RGITPDEALAHVGAVIDAGFDAVEIPLNS---P-QWEQSIPAIVDAYG--DKALIGAGTVLKPEQVDAL--- 76 (212)
T ss_dssp SCEEEEC-TTCCHHHHHHHHHHHHHHTCCEEEEETTS---T-THHHHHHHHHHHHT--TTSEEEEECCCSHHHHHHH---
T ss_pred CCEEEEE-eCCCHHHHHHHHHHHHHCCCCEEEEeCCC---h-hHHHHHHHHHHhCC--CCeEEEeccccCHHHHHHH---
Confidence 4555565 35678999999999999999998886543 1 34567888888775 3455533333455543222
Q ss_pred cccCCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHH
Q 041113 724 IKDCDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQR 803 (983)
Q Consensus 724 l~~~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~ 803 (983)
.+.+..++--|.. ...+.+.++..+.++..+ +.+.. .+....+.|+|++.+.++..-|+.. +.++++.
T Consensus 77 -~~~Gad~V~~~~~-~~~~~~~~~~~g~~~~~g--~~t~~-----e~~~a~~~G~d~v~v~~t~~~g~~~---~~~l~~~ 144 (212)
T 2v82_A 77 -ARMGCQLIVTPNI-HSEVIRRAVGYGMTVCPG--CATAT-----EAFTALEAGAQALKIFPSSAFGPQY---IKALKAV 144 (212)
T ss_dssp -HHTTCCEEECSSC-CHHHHHHHHHTTCEEECE--ECSHH-----HHHHHHHTTCSEEEETTHHHHCHHH---HHHHHTT
T ss_pred -HHcCCCEEEeCCC-CHHHHHHHHHcCCCEEee--cCCHH-----HHHHHHHCCCCEEEEecCCCCCHHH---HHHHHHh
Confidence 2345555543333 234445556677776555 44432 2444456789988775432224433 3344444
Q ss_pred cC--CcEEeCCCC
Q 041113 804 HG--KMAVVSAAF 814 (983)
Q Consensus 804 ~g--i~~~~~~~~ 814 (983)
.. ++++..+..
T Consensus 145 ~~~~ipvia~GGI 157 (212)
T 2v82_A 145 LPSDIAVFAVGGV 157 (212)
T ss_dssp SCTTCEEEEESSC
T ss_pred ccCCCeEEEeCCC
Confidence 43 777655433
No 446
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=76.96 E-value=3.3 Score=48.71 Aligned_cols=105 Identities=10% Similarity=0.040 Sum_probs=68.7
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+-+++++.+|++==| |..-.+..+.+|.. .++|+++|.-+-... ... .+..+
T Consensus 61 Aa~aAdGyAr~tG~pgv~~~TsGpG~~N~~~gia~A~~--d~vPll~itG~~p~~-~~g----------------~~~~Q 121 (578)
T 3lq1_A 61 AGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANL--SQIPLIVLTADRPHE-LRN----------------VGAPQ 121 (578)
T ss_dssp HHHHHHHHHHHHCCCEEEEECSSHHHHTTHHHHHHHHH--TTCCEEEEEEECCGG-GTT----------------SSCTT
T ss_pred HHHHHHHHHHhhCCCEEEEECCchhhhhhhHHHHHHHh--cCCCeEEEeCCCCHH-hhc----------------CCCCC
Confidence 55688888877788888876433 34455789999987 899999988753321 110 01123
Q ss_pred CCCHHHHHHHcCCceeeeCCHHH-----------HHHHHHhhhc-cCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVE-----------LEEALSMSQH-LGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~e-----------L~~aL~~a~~-~~~p~lIeV~~~ 451 (983)
..|...+.+.+--...+|+++++ +.+|+..|.. .+||+.|++..|
T Consensus 122 e~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~d 178 (578)
T 3lq1_A 122 AMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPLR 178 (578)
T ss_dssp CCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEECC
T ss_pred CcCHhhHHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECccC
Confidence 45666677777667778776654 3444444443 379999999975
No 447
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=76.83 E-value=1 Score=42.37 Aligned_cols=138 Identities=19% Similarity=0.153 Sum_probs=69.5
Q ss_pred hHHHHHHHHhcCCceEEEEccCCC-hhHHH---HHHHHHHhcCCcEE--eccccCccchhhhhhhhhhcccccccc----
Q 041113 75 QMAEVLELVQGVNKGLLLVGAVHN-EDEIW---AVLHLARHIRWPVV--ADILSGLRLRKLLASFLETEQNILFLD---- 144 (983)
Q Consensus 75 ~i~~~~~~L~~AkrPvIl~G~g~~-~~~~~---~l~~lae~l~~Pv~--~t~~sg~~~~~~kg~~~~~hp~~~~~g---- 144 (983)
..++++++|..|++.+|+-|+|.. ..+.. ++.++.+..|+-|= --|-+| -.|.. =+.| +-
T Consensus 19 ~~~~~a~~l~~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGh-MNVL-LAEA~V 88 (186)
T 2bru_C 19 TAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAG--------RLPGH-MNVL-LAEAKV 88 (186)
T ss_dssp -CHHHHHHHHHCSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSSS--------SSSST-HHHH-HHHHTC
T ss_pred CHHHHHHHHHhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc--------cCCCc-ceEE-EEecCC
Confidence 456788999999999999999843 33333 45555555565442 222222 22211 0000 00
Q ss_pred chhh-hccCccccccCCCCEEEEeCCccccHHHHH---HH--------HhcCCceEEEEcCCCC--C--C-C--CCCCee
Q 041113 145 HLDH-ALLSESVKDWIQFDVIIQIGSRITSKRISQ---MI--------EECFPCTYILVDNHPC--R--H-D--PSHSVT 205 (983)
Q Consensus 145 ~~g~-~~~~~~~~~~~~aDlvl~iG~~~~~~~~~~---~~--------~~~~~~~~i~id~d~~--~--~-~--~~~~~~ 205 (983)
-|+. +-....+..+.+.|++|+||..-.-..... .+ .-++.+++|.+..+-. . + + .+.+.+
T Consensus 89 PYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~kAk~ViV~KRsm~~GyAgv~NpLF~~~nt 168 (186)
T 2bru_C 89 PYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENT 168 (186)
T ss_dssp CTTTEEESCCCHHHHHHCSEEEECBCGGGGCGGGTTSTTSSSTTCCCCCCTTSSEEEEECSSSCCSSCCCSCTTTBSSSE
T ss_pred CHHHHhhHHHHhcccccCCEEEEeccccccCccccCCCCCCcCCCeeeccccCCEEEEEECCCCCCcCCCcCcceecCCc
Confidence 0110 011233345668899999998632211110 00 0111234554543210 0 0 1 123345
Q ss_pred EEEEcCHHHHHHHHHhc
Q 041113 206 HRIQSTIVQFVDFLLKV 222 (983)
Q Consensus 206 ~~i~~d~~~~l~~L~~~ 222 (983)
.-+.||++..+++|...
T Consensus 169 ~MlfGDAK~~~~~l~~~ 185 (186)
T 2bru_C 169 HMLFGDAKASVDAILKA 185 (186)
T ss_dssp EEECSCHHHHHHHHHHH
T ss_pred eEEeccHHHHHHHHHHh
Confidence 66789999999998754
No 448
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=76.63 E-value=5.8 Score=43.55 Aligned_cols=101 Identities=18% Similarity=0.112 Sum_probs=60.7
Q ss_pred hHHHHHhhhhccCceEEEE-EccchhhhccchHHH-HHhhcc------CCCEEEEEEeCCCCccccCCCCCCCCCccccc
Q 041113 328 LLSTAIGFAVGCNKHVLCV-VGDISFLHDTNGLAI-LKQRMK------RKPILMLVINNHGGAIFSLLPIADRTEPRILD 399 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i-~GDGsf~~~~~eL~T-a~~~~~------~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~ 399 (983)
.++.|.|++++--+|++.+ .+|.. +.....|.. ++...| ++|+++++-+-++.+ .
T Consensus 110 ~v~~a~G~A~~G~rpv~~~tf~~Fl-~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g---~------------- 172 (369)
T 1ik6_A 110 ILGFAMGMAMAGLKPVAEIQFVDFI-WLGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTR---G------------- 172 (369)
T ss_dssp HHHHHHHHHHTTCEEEEECCCC-----CCHHHHHHHHHHHHC------CCCCEEEEEECC--------------------
T ss_pred HHHHHHHHHHCCCeeEEEecchhHH-HHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCC---C-------------
Confidence 5788889887755666665 88865 444444544 332112 899877765443211 0
Q ss_pred cccccCCCCCHHHHHHHc-CCceeeeCCHHHHHHHHHhhhccCCCEEEEE
Q 041113 400 QYFYTTHNISIQNLCLAH-GLNHVQVKTKVELEEALSMSQHLGTDRVIEV 448 (983)
Q Consensus 400 ~~~~~~~~~df~~la~a~-G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV 448 (983)
+..+...+..+.++. |+..+...++.|+...|+.+++.++|++|-.
T Consensus 173 ---g~~hs~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A~~~~~Pv~i~~ 219 (369)
T 1ik6_A 173 ---GLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKAAIRGDDPVVFLE 219 (369)
T ss_dssp ----------HHHHHHTCTTCEEECCCSHHHHHHHHHHHHHSSSCEEEEE
T ss_pred ---CccccccHHHHHcCCCCcEEEecCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 011222234444444 7888999999999999999998889999864
No 449
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=76.47 E-value=13 Score=41.16 Aligned_cols=75 Identities=20% Similarity=0.258 Sum_probs=51.5
Q ss_pred HHHHHHHhhhcCCCEEEEeccCC-------------------CChHHH----HHHHHHHHHHcCCC-cEEEEEcCCC---
Q 041113 659 VASIATTLVEEGFTAIKLKVARR-------------------ADPIKD----AEVIQEVRKKVGHR-IELRVDANRN--- 711 (983)
Q Consensus 659 ~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~d----~~~v~~vr~~~g~~-~~l~vDaN~~--- 711 (983)
+.+.++.+++.||..|-|+.+.+ .+++.. ++.+++||+++|++ +.+++-....
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g 249 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQN 249 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCC
Confidence 45556667789999999998751 123222 57889999999854 5566654322
Q ss_pred ----CC----HHHHHHHHhhc---ccCC--Cceee
Q 041113 712 ----WT----YQEALEFGFLI---KDCD--LQYIE 733 (983)
Q Consensus 712 ----~~----~~~a~~~~~~l---~~~~--i~~iE 733 (983)
|+ .++...+++.| ++.+ +.||.
T Consensus 250 ~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylh 284 (407)
T 3tjl_A 250 MKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYIS 284 (407)
T ss_dssp CCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred CcccccccccHHHHHHHHHHHHhHhhcCCceeEEE
Confidence 24 56788899999 7777 77764
No 450
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=76.44 E-value=6.8 Score=45.78 Aligned_cols=112 Identities=11% Similarity=-0.024 Sum_probs=70.2
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccC-
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTT- 405 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~- 405 (983)
+.-+|.|.+.+++ +.+|++-=| |..-.++.+.+|.. .++|+++|.-+-.....-+... .....++.
T Consensus 54 Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~A~~--~~~Pll~itg~~~~~~~~~~~~---------~~~~~g~~~ 121 (563)
T 2vk8_A 54 AAYAADGYARIKG-MSCIITTFGVGELSALNGIAGSYA--EHVGVLHVVGVPSISAQAKQLL---------LHHTLGNGD 121 (563)
T ss_dssp HHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHHHHHH--HTCCEEEEEEECCHHHHHTTCC---------CTTSCSSSC
T ss_pred HHHHHHHHHHhhC-CcEEEEcCCCcHHHHHHHHHHHHh--hCCCEEEEECCCChHHhhcccc---------cccccCCcc
Confidence 5667888777766 666655322 33345788998887 7999999988754432211000 00001110
Q ss_pred CCCCHHHHHHHcCCceeeeCCHHHH----HHHHHhhhccCCCEEEEEEcCc
Q 041113 406 HNISIQNLCLAHGLNHVQVKTKVEL----EEALSMSQHLGTDRVIEVESCI 452 (983)
Q Consensus 406 ~~~df~~la~a~G~~~~~v~~~~eL----~~aL~~a~~~~~p~lIeV~~~~ 452 (983)
.+ |+..+.+.+-....++++++++ ..|++.+...+||+.|++..|-
T Consensus 122 ~q-~~~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d~ 171 (563)
T 2vk8_A 122 FT-VFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANL 171 (563)
T ss_dssp SS-HHHHHHHTTCSEEEECCCTTTHHHHHHHHHHHHHHHTSCEEEEEETTG
T ss_pred hH-HHHHHhhhhEEEEEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 11 5678888888888999986555 4455555545699999999874
No 451
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=76.05 E-value=34 Score=34.45 Aligned_cols=139 Identities=15% Similarity=0.236 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI 732 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 732 (983)
..++++..+.++.+++.|.+.+.+..-. ....+.++++++.+ +++.+..+ --++.+++...++ .+-.++
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~----~~~~~~i~~l~~~~-~~l~vgaG--tvl~~d~~~~A~~----aGAd~v 93 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRS----EAAADAIRLLRANR-PDFLIAAG--TVLTAEQVVLAKS----SGADFV 93 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTS----TTHHHHHHHHHHHC-TTCEEEEE--SCCSHHHHHHHHH----HTCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccC----chHHHHHHHHHHhC-cCcEEeeC--cEeeHHHHHHHHH----CCCCEE
Confidence 3567788889999999999999997632 34567889899999 46555554 3556666544433 344555
Q ss_pred ecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC-cCCHHHHHHHHHHHHHc-CCcEEe
Q 041113 733 EEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV-IGGFENAGLIARWAQRH-GKMAVV 810 (983)
Q Consensus 733 EeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~-~GGl~~~~~~~~~A~~~-gi~~~~ 810 (983)
=-|-.+ .+..+..++.++|+..| +.+.. ......+.|+|++.+=+.. .||+.....+ .+.. +++++.
T Consensus 94 ~~p~~d-~~v~~~ar~~g~~~i~G--v~t~~-----e~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l---~~~~~~ipvva 162 (224)
T 1vhc_A 94 VTPGLN-PKIVKLCQDLNFPITPG--VNNPM-----AIEIALEMGISAVKFFPAEASGGVKMIKAL---LGPYAQLQIMP 162 (224)
T ss_dssp ECSSCC-HHHHHHHHHTTCCEECE--ECSHH-----HHHHHHHTTCCEEEETTTTTTTHHHHHHHH---HTTTTTCEEEE
T ss_pred EECCCC-HHHHHHHHHhCCCEEec--cCCHH-----HHHHHHHCCCCEEEEeeCccccCHHHHHHH---HhhCCCCeEEE
Confidence 344223 33334444588887776 55543 3455566789998876633 5665544333 3344 688665
Q ss_pred CCC
Q 041113 811 SAA 813 (983)
Q Consensus 811 ~~~ 813 (983)
-+.
T Consensus 163 iGG 165 (224)
T 1vhc_A 163 TGG 165 (224)
T ss_dssp BSS
T ss_pred ECC
Confidence 443
No 452
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=75.55 E-value=19 Score=37.92 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=69.3
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHc--------------CC-CcEEEEEc
Q 041113 644 IKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKV--------------GH-RIELRVDA 708 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~--------------g~-~~~l~vDa 708 (983)
||+.-.++-+.+.+ .+.+.++.||+.+-+.-.. .+.+++++..+++-+.. |. +-.+..+.
T Consensus 73 VPValHlDHg~~~e----~~~~ai~~GFtSVMiDgS~-~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~ 147 (305)
T 1rvg_A 73 VPVAVHLDHGSSYE----SVLRALRAGFTSVMIDKSH-EDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDE 147 (305)
T ss_dssp SCEEEEEEEECSHH----HHHHHHHTTCSEEEECCTT-SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------
T ss_pred CcEEEECCCCCCHH----HHHHHHHcCCCeeeeCCCC-CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccc
Confidence 44444444344554 4555667899999998765 46788888777765532 21 11222233
Q ss_pred C-CCC-CHHHHHHHHhhccc----------CCCcee-ecCCCChHHHHHHHhhcCCcEEeCCCc
Q 041113 709 N-RNW-TYQEALEFGFLIKD----------CDLQYI-EEPVQNEEDIIKYCEESGLPVALDETI 759 (983)
Q Consensus 709 N-~~~-~~~~a~~~~~~l~~----------~~i~~i-EeP~~~~~~~~~l~~~~~ipIa~dEs~ 759 (983)
+ ..| ++++|.+|.++..- +|.+=. .+|--+++-++++++.+++|+.+.=.-
T Consensus 148 ~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgS 211 (305)
T 1rvg_A 148 KDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGAS 211 (305)
T ss_dssp CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCC
T ss_pred cccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCC
Confidence 3 345 79999999885522 233222 455447999999999999999987754
No 453
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=75.47 E-value=2.5 Score=44.67 Aligned_cols=61 Identities=7% Similarity=0.064 Sum_probs=43.9
Q ss_pred ccCCCCEEEEeCCccccHHHHHHHHh--cCCceEEEEcCCCCCCCCCCCeeEEEEcCHHHHHHH
Q 041113 157 DWIQFDVIIQIGSRITSKRISQMIEE--CFPCTYILVDNHPCRHDPSHSVTHRIQSTIVQFVDF 218 (983)
Q Consensus 157 ~~~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~ 218 (983)
.+.+||++|++|+++.-......... ....+++.|+.++..++.. ..++.|.+++..+++.
T Consensus 213 ~~~~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~~~~-~~d~~i~g~a~~vl~~ 275 (290)
T 3u31_A 213 EIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNK-MSDYHVCAKFSELTKV 275 (290)
T ss_dssp HHHHCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCCTTTTT-TCSEEEESCGGGHHHH
T ss_pred HHhcCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCCCCCCc-cceEEEECCHHHHHHH
Confidence 45789999999999976665544332 2344688899988766432 3678899999998753
No 454
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=75.32 E-value=3.7 Score=49.39 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=31.2
Q ss_pred CceEEEeCCCCCChh--hHHHHHHHh-hCCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE--EWIPIMKAV-SGSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--~w~~~~~~l-~~~~~vi~~Dl~G~G~S 978 (983)
.|.||++||.+.... .|......| ...|.|+++|+||+|.+
T Consensus 454 ~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~ 497 (693)
T 3iuj_A 454 NPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEY 497 (693)
T ss_dssp CCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTT
T ss_pred ccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCcc
Confidence 689999999776443 455554444 55799999999999865
No 455
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=75.25 E-value=6.3 Score=45.94 Aligned_cols=112 Identities=13% Similarity=0.001 Sum_probs=69.0
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+.+ +.+|++-=| +..-.+..+.+|.. .++|+++|.-+-.....-+.. ......++..
T Consensus 55 A~~~A~Gyar~tg-~~v~~~tsGpG~~N~~~gv~~A~~--~~~Pll~itg~~p~~~~~~~~---------~~~~~~g~~~ 122 (552)
T 1ovm_A 55 ASYAADGYARCKG-FAALLTTFGVGELSAMNGIAGSYA--EHVPVLHIVGAPGTAAQQRGE---------LLHHTLGDGE 122 (552)
T ss_dssp HHHHHHHHHHHHS-CEEEEEETTHHHHHTHHHHHHHHH--TTCCEEEEEEECCHHHHHHTC---------CCTTSCSSSC
T ss_pred HHHHHHHHHHhhC-CcEEEEccCCcHHHHHHHHHHHhh--hcCCEEEEECCCCHHHHhccc---------ccccccCCCc
Confidence 6678888877765 666655332 34556889999887 899999999875543211000 0000011110
Q ss_pred CCCHHHHHHHcCCceeeeCC---HHHHHHHHHhhhccCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKT---KVELEEALSMSQHLGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~---~~eL~~aL~~a~~~~~p~lIeV~~~ 451 (983)
.-|+..+.+.+-.....+++ ++.+..|++.+....||+.|++..|
T Consensus 123 ~q~~~~~~~~~tk~~~~v~~~~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 123 FRHFYHMSEPITVAQAVLTEQNACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp CSHHHHHTGGGCSEEEECCTTTHHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred HHHHHHHHHhheeEEEEEccccHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 01467777888778888988 4445555555554469999999765
No 456
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=75.15 E-value=11 Score=40.07 Aligned_cols=112 Identities=17% Similarity=0.221 Sum_probs=80.8
Q ss_pred eeEEEEeecC-CCCHHHHHHHHHHhhhcCCCEEEEeccCC------------CChHHHHHHHHHHHHHc-CCCcEE--EE
Q 041113 643 SIKICALIDS-NKSPVEVASIATTLVEEGFTAIKLKVARR------------ADPIKDAEVIQEVRKKV-GHRIEL--RV 706 (983)
Q Consensus 643 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~KiKig~~------------~~~~~d~~~v~~vr~~~-g~~~~l--~v 706 (983)
.+|+.+-... ..+++.+.+-++++.+.|...+||.=+.. .+.++-+++|++++++. .+++.| |-
T Consensus 101 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt 180 (318)
T 1zlp_A 101 NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART 180 (318)
T ss_dssp SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee
Confidence 3565544321 24889999999999999999999963320 12234567999998875 234444 46
Q ss_pred EcCCCCCHHHHHHHHhhcccCC--CceeecCCCChHHHHHHHhhcCCcEEe
Q 041113 707 DANRNWTYQEALEFGFLIKDCD--LQYIEEPVQNEEDIIKYCEESGLPVAL 755 (983)
Q Consensus 707 DaN~~~~~~~a~~~~~~l~~~~--i~~iEeP~~~~~~~~~l~~~~~ipIa~ 755 (983)
|+......+++++.++.+++.| ..|+|-+ ++.+.++++.+..++|+..
T Consensus 181 da~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-~~~e~~~~i~~~l~~P~la 230 (318)
T 1zlp_A 181 DARAPHGLEEGIRRANLYKEAGADATFVEAP-ANVDELKEVSAKTKGLRIA 230 (318)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-CSHHHHHHHHHHSCSEEEE
T ss_pred HHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHHhcCCCEEE
Confidence 7664445689999999998865 5689975 5589999999999999854
No 457
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=74.25 E-value=2.7 Score=49.12 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=31.6
Q ss_pred CceEEEeCCCCCChh--------hHH---------------HHHHHhhC-CCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTGE--------EWI---------------PIMKAVSG-SARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~--------~w~---------------~~~~~l~~-~~~vi~~Dl~G~G~S~~ 980 (983)
.|.||+.||++.+.. .|. .....|.+ .|.|+++|.||+|.|..
T Consensus 67 ~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG~G~S~G 133 (560)
T 3iii_A 67 FPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSDKSKG 133 (560)
T ss_dssp EEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTTSTTCCS
T ss_pred CCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCCCCCCCC
Confidence 588999999998741 110 12455654 59999999999999974
No 458
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=73.98 E-value=8.9 Score=38.56 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=69.3
Q ss_pred HHHHhhhcCCCEEEEeccCCCCh-HHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee-------e
Q 041113 662 IATTLVEEGFTAIKLKVARRADP-IKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI-------E 733 (983)
Q Consensus 662 ~~~~~~~~G~~~~KiKig~~~~~-~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i-------E 733 (983)
+++.+.+.|...+-+......++ ..-.+.++.+|+.+ ++..+.++.+ +.+++.+.. +.+..++ .
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~-~~~~v~~~~~---t~~e~~~~~----~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHA-PNVEIMADIA---TVEEAKNAA----RLGFDYIGTTLHGYT 151 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHC-TTSEEEEECS---SHHHHHHHH----HTTCSEEECTTTTSS
T ss_pred HHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhC-CCceEEecCC---CHHHHHHHH----HcCCCEEEeCCCcCc
Confidence 45556778999887765431122 22356789999998 6888888875 677766543 3333333 1
Q ss_pred ----cC--CC-ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEE
Q 041113 734 ----EP--VQ-NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVI 783 (983)
Q Consensus 734 ----eP--~~-~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~ 783 (983)
.+ .. +++.++++++..++||..+=-+.+.. .+..+.+.|++.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~-----~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 152 SYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPD-----MYKRVMDLGVHCSVV 203 (223)
T ss_dssp TTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHH-----HHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHH-----HHHHHHHcCCCEEEE
Confidence 01 11 34556778887889998877776654 355566678887765
No 459
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=73.33 E-value=2 Score=43.71 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=64.9
Q ss_pred CCHHHHHHHHhhcccCCCceeecCCCC---hHHHHHHHhhcC-CcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC
Q 041113 712 WTYQEALEFGFLIKDCDLQYIEEPVQN---EEDIIKYCEESG-LPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV 787 (983)
Q Consensus 712 ~~~~~a~~~~~~l~~~~i~~iEeP~~~---~~~~~~l~~~~~-ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~ 787 (983)
-+++++.++++.|-+-|+.++|=++.+ .+.+++++++.+ +-|..| ++.+. +.++..++.|+++++.
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaG-TVlt~-----~~a~~Ai~AGA~fIvs---- 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAG-TILNG-----EQALAAKEAGATFVVS---- 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEE-CCCSH-----HHHHHHHHHTCSEEEC----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeEC-CcCCH-----HHHHHHHHcCCCEEEe----
Confidence 357889999999999999999988873 346677887764 334444 45443 3577778889998763
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEeCCCC
Q 041113 788 IGGFENAGLIARWAQRHGKMAVVSAAF 814 (983)
Q Consensus 788 ~GGl~~~~~~~~~A~~~gi~~~~~~~~ 814 (983)
+++ ..++++.|+++|++++.+.+.
T Consensus 113 -P~~--~~~vi~~~~~~gi~~ipGv~T 136 (232)
T 4e38_A 113 -PGF--NPNTVRACQEIGIDIVPGVNN 136 (232)
T ss_dssp -SSC--CHHHHHHHHHHTCEEECEECS
T ss_pred -CCC--CHHHHHHHHHcCCCEEcCCCC
Confidence 233 356888899999998776653
No 460
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=72.96 E-value=27 Score=35.24 Aligned_cols=138 Identities=13% Similarity=0.149 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceee
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIE 733 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iE 733 (983)
.++++..+.++.+++.|.+.+.+..-. ....+.++++++.+ +++.+..+. -.+.+++...++. +-.++=
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k~----~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~a----GAd~v~ 103 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLRS----QHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAA----GAQFVV 103 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESSS----THHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHH----TCSSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCC----ccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHC----CCCEEE
Confidence 467778888999999999999997632 34567888899999 566655554 4677665544432 333332
Q ss_pred cCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC-cCCHHHHHHHHHHHHHc-CCcEEeC
Q 041113 734 EPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV-IGGFENAGLIARWAQRH-GKMAVVS 811 (983)
Q Consensus 734 eP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~-~GGl~~~~~~~~~A~~~-gi~~~~~ 811 (983)
-|-. -.+..+.++..++|+..| +.+.. ......+.|+|++.+=+.. .||+... .++.... +++++.-
T Consensus 104 ~p~~-d~~v~~~~~~~g~~~i~G--~~t~~-----e~~~A~~~Gad~vk~FPa~~~~G~~~l---k~i~~~~~~ipvvai 172 (225)
T 1mxs_A 104 TPGI-TEDILEAGVDSEIPLLPG--ISTPS-----EIMMGYALGYRRFKLFPAEISGGVAAI---KAFGGPFGDIRFCPT 172 (225)
T ss_dssp CSSC-CHHHHHHHHHCSSCEECE--ECSHH-----HHHHHHTTTCCEEEETTHHHHTHHHHH---HHHHTTTTTCEEEEB
T ss_pred eCCC-CHHHHHHHHHhCCCEEEe--eCCHH-----HHHHHHHCCCCEEEEccCccccCHHHH---HHHHhhCCCCeEEEE
Confidence 3422 345667777788988776 55543 3555667899998875532 4554433 3333445 6786654
Q ss_pred CC
Q 041113 812 AA 813 (983)
Q Consensus 812 ~~ 813 (983)
+.
T Consensus 173 GG 174 (225)
T 1mxs_A 173 GG 174 (225)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 461
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=72.83 E-value=14 Score=38.64 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=87.0
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHc-CCCcEEE------------EEcC
Q 041113 643 SIKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKV-GHRIELR------------VDAN 709 (983)
Q Consensus 643 ~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~-g~~~~l~------------vDaN 709 (983)
+||+.-.++-+.+.+ .+.+.++.||+.+-+.-.. .+.+++++..+.+-+.. ..++.+= ++.+
T Consensus 80 ~VPValHlDHg~~~e----~i~~ai~~GFtSVMiDgS~-~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~ 154 (288)
T 3q94_A 80 TVPVAIHLDHGSSFE----KCKEAIDAGFTSVMIDASH-HPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAE 154 (288)
T ss_dssp CSCEEEEEEEECSHH----HHHHHHHHTCSEEEECCTT-SCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGG
T ss_pred CCcEEEECCCCCCHH----HHHHHHHcCCCeEEEeCCC-CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCc
Confidence 355555554444555 4556667899999998765 46788888877776542 0111100 1122
Q ss_pred C-CC-CHHHHHHHHhhccc----------CCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCC
Q 041113 710 R-NW-TYQEALEFGFLIKD----------CDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPG 777 (983)
Q Consensus 710 ~-~~-~~~~a~~~~~~l~~----------~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~ 777 (983)
. .| ++++|.+|.++..- +|. |=.+|--+++-++++++.+++|+.+.=.--.. .+.+++.++.|
T Consensus 155 ~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~-Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~----~e~i~~ai~~G 229 (288)
T 3q94_A 155 GVIYADPAECKHLVEATGIDCLAPALGSVHGP-YKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIP----TADIEKAISLG 229 (288)
T ss_dssp GCBCCCHHHHHHHHHHHCCSEEEECSSCBSSC-CSSSCCCCHHHHHHHHHHHCSCEEECCCTTCC----HHHHHHHHHTT
T ss_pred cccCCCHHHHHHHHHHHCCCEEEEEcCcccCC-cCCCCccCHHHHHHHHHhcCCCEEEeCCCCCC----HHHHHHHHHcC
Confidence 3 35 79999999875532 233 33445447999999999999999987654443 24688888888
Q ss_pred ceEEEEcCC
Q 041113 778 IVAIVIKPS 786 (983)
Q Consensus 778 ~~~i~~k~~ 786 (983)
+.=+|++..
T Consensus 230 v~KiNi~Td 238 (288)
T 3q94_A 230 TSKINVNTE 238 (288)
T ss_dssp EEEEEECHH
T ss_pred CeEEEEChH
Confidence 767788754
No 462
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=72.59 E-value=24 Score=36.86 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=78.9
Q ss_pred HHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHc--------------CC-CcEEEEEcC-CCC-CHHHHHHHHhh
Q 041113 661 SIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKV--------------GH-RIELRVDAN-RNW-TYQEALEFGFL 723 (983)
Q Consensus 661 ~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~--------------g~-~~~l~vDaN-~~~-~~~~a~~~~~~ 723 (983)
+.+.+.++.||+.+-+.-.. .+.+++++..+++-+.. |. +=.+..+.+ ..| ++++|.+|.++
T Consensus 88 e~i~~ai~~GFtSVMiDgS~-lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~ 166 (286)
T 1gvf_A 88 DDIRRKVHAGVRSAMIDGSH-FPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVEL 166 (286)
T ss_dssp HHHHHHHHTTCCEEEECCTT-SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEECCCC-CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHH
Confidence 34556677899999998765 46788888777765532 21 111222222 345 79999999875
Q ss_pred ccc----------CCCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC
Q 041113 724 IKD----------CDLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV 787 (983)
Q Consensus 724 l~~----------~~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~ 787 (983)
..- +|+ |=.+|--+++-++++++.+++|+.+.=.-.... +.++..++.|+.=+|++...
T Consensus 167 TgvD~LAvaiGt~HG~-Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~----e~i~~ai~~Gv~KiNi~Tdl 235 (286)
T 1gvf_A 167 TGVDSLAVAIGTAHGL-YSKTPKIDFQRLAEIREVVDVPLVLHGASDVPD----EFVRRTIELGVTKVNVATEL 235 (286)
T ss_dssp HCCSEEEECSSCCSSC-CSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCH----HHHHHHHHTTEEEEEECHHH
T ss_pred HCCCEEEeecCccccC-cCCCCccCHHHHHHHHHhcCCCEEEECCCCCCH----HHHHHHHHCCCeEEEEChHH
Confidence 532 233 224565479999999999999999877654432 46888888887777887543
No 463
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=71.86 E-value=23 Score=35.74 Aligned_cols=110 Identities=19% Similarity=0.297 Sum_probs=71.3
Q ss_pred HHHHHhhhcCCCEEEEeccCCCCh--HHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee------
Q 041113 661 SIATTLVEEGFTAIKLKVARRADP--IKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI------ 732 (983)
Q Consensus 661 ~~~~~~~~~G~~~~KiKig~~~~~--~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i------ 732 (983)
++++.+++.|...+-+......++ ..-.+.++.+|+.+ ++..+.++.+ +.+++.+..+ .+..++
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~-~~~~v~~~~~---t~~ea~~a~~----~Gad~i~~~v~g 163 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY-PNQLLMADIS---TFDEGLVAHQ----AGIDFVGTTLSG 163 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC-TTCEEEEECS---SHHHHHHHHH----TTCSEEECTTTT
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC-CCCeEEEeCC---CHHHHHHHHH----cCCCEEeeeccc
Confidence 356667788999887765431112 12356789999888 6788888875 6777655433 233333
Q ss_pred -e---cCC-C-ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEc
Q 041113 733 -E---EPV-Q-NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIK 784 (983)
Q Consensus 733 -E---eP~-~-~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k 784 (983)
+ +.. . +++.++++++. ++||..+=-+.+.. .+..+.+.|+|.+.+=
T Consensus 164 ~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~-----~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 164 YTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPE-----EAKKINDLGVAGIVVG 215 (234)
T ss_dssp SSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHH-----HHHHHHTTCCSEEEEC
T ss_pred cCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHH-----HHHHHHHCCCCEEEEc
Confidence 1 111 1 56778888877 89998877776654 3666777788887653
No 464
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=71.78 E-value=7.3 Score=42.25 Aligned_cols=102 Identities=12% Similarity=0.052 Sum_probs=63.6
Q ss_pred hHHHHHhhhhccCceEEEE-EccchhhhccchHHHHHh---h----ccCCCEEEEEEeCCCCccccCCCCCCCCCccccc
Q 041113 328 LLSTAIGFAVGCNKHVLCV-VGDISFLHDTNGLAILKQ---R----MKRKPILMLVINNHGGAIFSLLPIADRTEPRILD 399 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i-~GDGsf~~~~~eL~Ta~~---~----~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~ 399 (983)
.++.|.|++++--+|++.+ .+|.. +.....+...+- + ..++|+++++- +++++- . .
T Consensus 74 ~v~~a~G~A~~G~rp~~~~~f~~F~-~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~-~G~~g~--~--G---------- 137 (341)
T 2ozl_B 74 FAGIAVGAAMAGLRPICEFMTFNFS-MQAIDQVINSAAKTYYMSGGLQPVPIVFRGP-NGASAG--V--A---------- 137 (341)
T ss_dssp HHHHHHHHHHTTCEEEEECSSGGGG-GGGHHHHHTTTTTHHHHTTSSCCCCCEEEEE-CSCCSS--C--C----------
T ss_pred HHHHHHHHHHCCCEEEEEeccHHHH-HHHHHHHHHHHHHHHhhccccCCCCEEEEEc-CcCCCC--C--C----------
Confidence 5888899888755566654 77776 333333332110 0 15899977766 443221 0 0
Q ss_pred cccccC-CCCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEE
Q 041113 400 QYFYTT-HNISIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVE 449 (983)
Q Consensus 400 ~~~~~~-~~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~ 449 (983)
.+. ..+| ..++.--|+.-+...++.|+...++.+++.++|++|-..
T Consensus 138 ---~tHs~~~e-a~l~~iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 138 ---AQHSQCFA-AWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp ---GGGCCCCH-HHHHTSTTCEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred ---cchhhHHH-HHhccCCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 011 2233 333343488889999999999999999988999987653
No 465
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=71.31 E-value=9.3 Score=40.63 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccC--C----CChHHHHHHHHHHHHHcCCCcEEEE-Ec-CCCCCHHHHHHHHhhcccC-
Q 041113 657 VEVASIATTLVEEGFTAIKLKVAR--R----ADPIKDAEVIQEVRKKVGHRIELRV-DA-NRNWTYQEALEFGFLIKDC- 727 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~--~----~~~~~d~~~v~~vr~~~g~~~~l~v-Da-N~~~~~~~a~~~~~~l~~~- 727 (983)
+...+.++++++.|...+-+.... + -++++..+.|+++++.+ ++.|.| |. |.-++++.+.+.++...+.
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~--~vplsI~DT~~~~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI--DVPLMIIGCGVEEKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC--SSCEEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC--CceEEEECCCCCCCCHHHHHHHHHhCCCCC
Confidence 456778888899999999888732 1 13466788999999987 789999 97 6667777766666655531
Q ss_pred ---CCceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCc--eEEEEcCCCc--C-CHHHH---HH
Q 041113 728 ---DLQYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGI--VAIVIKPSVI--G-GFENA---GL 796 (983)
Q Consensus 728 ---~i~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~--~~i~~k~~~~--G-Gl~~~---~~ 796 (983)
|=.|-| +.+.+..+..+.+.|+++--. .+.. ...+....+.+.|+ +-|.+||... | |+... ++
T Consensus 152 ~iINdvs~~----~~~~~~~~aa~~g~~vv~m~~-~dv~-~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~ 225 (310)
T 2h9a_B 152 CLLSSATKD----NYKPIVATCMVHGHSVVASAP-LDIN-LSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIE 225 (310)
T ss_dssp CEEEEECTT----THHHHHHHHHHHTCEEEEECS-SCHH-HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHH
T ss_pred CEEEECCCC----ccHHHHHHHHHhCCCEEEECh-hHHH-HHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHHHHH
Confidence 111222 367888888889999877322 1111 01223344556676 5688999853 3 34344 44
Q ss_pred HHHHH-----HHcCCcEEeCC
Q 041113 797 IARWA-----QRHGKMAVVSA 812 (983)
Q Consensus 797 ~~~~A-----~~~gi~~~~~~ 812 (983)
+++.+ +..|.++.++.
T Consensus 226 ~ir~~al~~~~~lg~P~l~g~ 246 (310)
T 2h9a_B 226 RMRLGALTGDKILAMPVVCFI 246 (310)
T ss_dssp HHHHHHHTTCGGGCSCBEECH
T ss_pred HHHHhhhhhhhcCCCCEEEEc
Confidence 44432 23577766665
No 466
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=70.70 E-value=5.7 Score=42.06 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=27.6
Q ss_pred CceEEEeCCCCCChhhHH-------HHHHHhhC-----CCEEEEEcCCC
Q 041113 938 DNILLFLHGFLGTGEEWI-------PIMKAVSG-----SARCISIDLPG 974 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~-------~~~~~l~~-----~~~vi~~Dl~G 974 (983)
.|.|||+||++++...|. .+++.|.+ .+.|+++|.+|
T Consensus 69 ~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~ 117 (297)
T 1gkl_A 69 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 117 (297)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS
T ss_pred CCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC
Confidence 578899999998776653 45566643 48999999875
No 467
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=70.69 E-value=6.7 Score=45.02 Aligned_cols=113 Identities=12% Similarity=0.163 Sum_probs=73.6
Q ss_pred HHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceeec---
Q 041113 658 EVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIEE--- 734 (983)
Q Consensus 658 ~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEe--- 734 (983)
+..+.++.+++.|+..+-+..... .+....+.++++|+.+ +++.+.+- +..+.++|..+. +.++.+|-=
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G-~~~~~~e~i~~i~~~~-p~~pvi~g--~~~t~e~a~~l~----~~G~d~I~v~~~ 308 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG-HSRRVIETLEMIKADY-PDLPVVAG--NVATPEGTEALI----KAGADAVKVGVG 308 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHC-TTSCEEEE--EECSHHHHHHHH----HTTCSEEEECSS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC-chHHHHHHHHHHHHHC-CCceEEeC--CcCCHHHHHHHH----HcCCCEEEEcCC
Confidence 345678888889999999876542 4567788999999999 46777662 356788875443 455555531
Q ss_pred -----------C--CCChHHHHHH---HhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEE
Q 041113 735 -----------P--VQNEEDIIKY---CEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVI 783 (983)
Q Consensus 735 -----------P--~~~~~~~~~l---~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~ 783 (983)
. .+..+.+..+ .+..++||.++=-+.+..| +.+++..|++.+++
T Consensus 309 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~d-----i~kala~GAd~V~i 368 (494)
T 1vrd_A 309 PGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGD-----IVKALAAGAESVMV 368 (494)
T ss_dssp CSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHH-----HHHHHHTTCSEEEE
T ss_pred CCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHH-----HHHHHHcCCCEEEE
Confidence 1 1223333333 3346899998877777543 44555567888764
No 468
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=70.29 E-value=79 Score=35.25 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHH-----hhhcC----CCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhh
Q 041113 653 NKSPVEVASIATT-----LVEEG----FTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFL 723 (983)
Q Consensus 653 ~~~~~~~~~~~~~-----~~~~G----~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~ 723 (983)
..+.+++.+.++. +...| ...+=++... .+++.=...++.|++.+ ++.|.+| ++++.+.+.++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~-~dpe~~~~~Vk~V~e~~--dvPlsID----~dp~vleaale~ 173 (445)
T 2h9a_A 101 TLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSS-QDAATFAKAVATAREVT--DLPFILI----GTPEQLAAALET 173 (445)
T ss_dssp TSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTT-CCHHHHHHHHHHHHHHC--CSCEEEE----SCHHHHHHHHHH
T ss_pred CCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCC-CCHHHHHHHHHHHHHhc--CCCEEEE----CCHHHHHHHHHh
Confidence 4466777776666 22233 4444454433 36776677889999887 6889999 888887777776
Q ss_pred cccCCC--ceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHH
Q 041113 724 IKDCDL--QYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWA 801 (983)
Q Consensus 724 l~~~~i--~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A 801 (983)
..+-+. .-+.+- +++.+..+....+.|+.+=-. +... ..+....+.+.|+.-|.+||.- +|+..++......
T Consensus 174 ~~d~~pLIns~t~e--n~~~~~~la~~y~~~vV~~~~--~l~~-l~~lv~~a~~~Gi~~IiLDP~~-~~~~~sl~~~~~I 247 (445)
T 2h9a_A 174 EGANNPLLYAATAD--NYEQMVELAKKYNVPLTVSAK--GLDA-LAELVQKITALGYKNLILDPQP-ENISEGLFYQTQI 247 (445)
T ss_dssp HGGGCCEEEEECTT--THHHHHHHHHHHTCCEEEECS--SHHH-HHHHHHHHHHTTCCCEEEECCC-SSHHHHHHHHHHH
T ss_pred cCCCCCEEEECCHH--HHHHHHHHHHHhCCeEEEEcC--CHHH-HHHHHHHHHHCCCCcEEEcCCc-hhHHHHHHHHHHH
Confidence 654221 111111 588888888888888766211 2221 2223334445677667799985 5566655544444
Q ss_pred HH
Q 041113 802 QR 803 (983)
Q Consensus 802 ~~ 803 (983)
+.
T Consensus 248 R~ 249 (445)
T 2h9a_A 248 RR 249 (445)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 469
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=70.20 E-value=41 Score=33.54 Aligned_cols=138 Identities=17% Similarity=0.153 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI 732 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i 732 (983)
..++++..+.++.+++.|.+.+.+..-. ....+.++++++.+ +++.+..+ .-.+.+++...++ . +-.++
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~----~~~~~~i~~l~~~~-~~~~vgag--tvi~~d~~~~A~~-a---GAd~v 92 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRT----ECAVDAIRAIAKEV-PEAIVGAG--TVLNPQQLAEVTE-A---GAQFA 92 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCS----TTHHHHHHHHHHHC-TTSEEEEE--SCCSHHHHHHHHH-H---TCSCE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC----hhHHHHHHHHHHHC-cCCEEeeC--EEEEHHHHHHHHH-c---CCCEE
Confidence 3567888889999999999999988632 23467888899999 46555444 3556666544433 2 33344
Q ss_pred ecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC-cCCHHHHHHHHHHHHHc-CCcEEe
Q 041113 733 EEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV-IGGFENAGLIARWAQRH-GKMAVV 810 (983)
Q Consensus 733 EeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~-~GGl~~~~~~~~~A~~~-gi~~~~ 810 (983)
=-|-. ..+..+.++..++|+..| +.+.. ......+.|+|++.+=+.. .||+.... ++.+.. +++++.
T Consensus 93 ~~p~~-d~~v~~~~~~~g~~~i~G--~~t~~-----e~~~A~~~Gad~v~~Fpa~~~gG~~~lk---~i~~~~~~ipvva 161 (214)
T 1wbh_A 93 ISPGL-TEPLLKAATEGTIPLIPG--ISTVS-----ELMLGMDYGLKEFKFFPAEANGGVKALQ---AIAGPFSQVRFCP 161 (214)
T ss_dssp EESSC-CHHHHHHHHHSSSCEEEE--ESSHH-----HHHHHHHTTCCEEEETTTTTTTHHHHHH---HHHTTCTTCEEEE
T ss_pred EcCCC-CHHHHHHHHHhCCCEEEe--cCCHH-----HHHHHHHCCCCEEEEecCccccCHHHHH---HHhhhCCCCeEEE
Confidence 34422 445666777788988776 55543 3455566789998875533 46655433 344445 688665
Q ss_pred CC
Q 041113 811 SA 812 (983)
Q Consensus 811 ~~ 812 (983)
-+
T Consensus 162 iG 163 (214)
T 1wbh_A 162 TG 163 (214)
T ss_dssp BS
T ss_pred EC
Confidence 44
No 470
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=69.96 E-value=29 Score=38.87 Aligned_cols=125 Identities=9% Similarity=0.062 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhhhcCCCEEEEeccCCCC--------hHHHHHHHHHHHHHc-----------------------------
Q 041113 656 PVEVASIATTLVEEGFTAIKLKVARRAD--------PIKDAEVIQEVRKKV----------------------------- 698 (983)
Q Consensus 656 ~~~~~~~~~~~~~~G~~~~KiKig~~~~--------~~~d~~~v~~vr~~~----------------------------- 698 (983)
++++.+.++.+.+ ++..|-+-++.+-. ++.=.+.+++|+++.
T Consensus 196 ~~dy~~~a~~l~~-~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~ 274 (443)
T 1tv5_A 196 VDDLKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFN 274 (443)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHhc-CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhccc
Confidence 6777777777654 79999999876421 122235666776542
Q ss_pred -------------------CCCcE-EEEEcCCCCCHHHHHHHHhhcccCCCcee-------ecC----C-----------
Q 041113 699 -------------------GHRIE-LRVDANRNWTYQEALEFGFLIKDCDLQYI-------EEP----V----------- 736 (983)
Q Consensus 699 -------------------g~~~~-l~vDaN~~~~~~~a~~~~~~l~~~~i~~i-------EeP----~----------- 736 (983)
+.++. +.|=-...|+.++..++++.+++.++.+| .++ +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~ 354 (443)
T 1tv5_A 275 KNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAK 354 (443)
T ss_dssp -------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHH
T ss_pred ccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCc
Confidence 12344 44444455888888888888888776654 111 0
Q ss_pred -C--ChHHHHHHHhhc--CCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCC
Q 041113 737 -Q--NEEDIIKYCEES--GLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPS 786 (983)
Q Consensus 737 -~--~~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~ 786 (983)
. ..+-++++++.+ .+||.+.=-+.+..| ..+.+..|+|.|++--.
T Consensus 355 ~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D-----A~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 355 LKDISTKFICEMYNYTNKQIPIIASGGIFSGLD-----ALEKIEAGASVCQLYSC 404 (443)
T ss_dssp HHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH-----HHHHHHTTEEEEEESHH
T ss_pred chHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH-----HHHHHHcCCCEEEEcHH
Confidence 0 134456778877 799998888887654 44445568999887544
No 471
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=69.83 E-value=3.8 Score=42.07 Aligned_cols=132 Identities=13% Similarity=0.182 Sum_probs=76.2
Q ss_pred HHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCC-cEEEEEcCC----------CC------CHHHHHHHHhhcc
Q 041113 663 ATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHR-IELRVDANR----------NW------TYQEALEFGFLIK 725 (983)
Q Consensus 663 ~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~-~~l~vDaN~----------~~------~~~~a~~~~~~l~ 725 (983)
++++++.|...+-+ +. ..-.|.+.+..+++.+|.+ +.+.+|++. .| +..+ +++.+.
T Consensus 92 ~~~~~~~Gad~V~i--~~--~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e---~~~~~~ 164 (253)
T 1h5y_A 92 ATTLFRAGADKVSV--NT--AAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVK---WAKEVE 164 (253)
T ss_dssp HHHHHHHTCSEEEE--SH--HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHH---HHHHHH
T ss_pred HHHHHHcCCCEEEE--Ch--HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHH---HHHHHH
Confidence 45555679887655 32 1234456677777788743 678888752 12 3333 233333
Q ss_pred cCCCce--e--------ecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHH
Q 041113 726 DCDLQY--I--------EEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAG 795 (983)
Q Consensus 726 ~~~i~~--i--------EeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~ 795 (983)
+.+..+ + .+.. +++.++++++..++||..+=-+.+.. .+..+.+.|++.+.+=-..+.+-....
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~~pvia~GGi~~~~-----~~~~~~~~Ga~~v~vgsal~~~~~~~~ 238 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVRIPVIASGGAGRVE-----HFYEAAAAGADAVLAASLFHFRVLSIA 238 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCSSCEEEESCCCSHH-----HHHHHHHTTCSEEEESHHHHTTSSCHH
T ss_pred hCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcCCCEEEeCCCCCHH-----HHHHHHHcCCcHHHHHHHHHcCCCCHH
Confidence 333222 2 1222 47788889888899998876555533 355555678888775433322212245
Q ss_pred HHHHHHHHcCCc
Q 041113 796 LIARWAQRHGKM 807 (983)
Q Consensus 796 ~~~~~A~~~gi~ 807 (983)
++.++.+++|++
T Consensus 239 ~~~~~l~~~g~~ 250 (253)
T 1h5y_A 239 QVKRYLKERGVE 250 (253)
T ss_dssp HHHHHHHHTTCB
T ss_pred HHHHHHHHcCCC
Confidence 666677888876
No 472
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=69.71 E-value=2.9 Score=43.23 Aligned_cols=136 Identities=12% Similarity=0.148 Sum_probs=80.7
Q ss_pred HHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCC-cEEEEEcC---C-------CCCH---HHHHHHHhhcccCC
Q 041113 663 ATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHR-IELRVDAN---R-------NWTY---QEALEFGFLIKDCD 728 (983)
Q Consensus 663 ~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~-~~l~vDaN---~-------~~~~---~~a~~~~~~l~~~~ 728 (983)
++++.+.|...+ -+|. ..-.+.+.+..+++.+|.+ +.+.+|+. + +|.. .+..++++.+++.+
T Consensus 89 ~~~~~~~Gad~V--~lg~--~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G 164 (253)
T 1thf_D 89 ASELILRGADKV--SINT--AAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRG 164 (253)
T ss_dssp HHHHHHTTCSEE--EESH--HHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEE--EECh--HHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCC
Confidence 555666787765 5554 2234456778888888764 56889984 2 3421 01223333333444
Q ss_pred Cc--ee---e-----cCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHH
Q 041113 729 LQ--YI---E-----EPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIA 798 (983)
Q Consensus 729 i~--~i---E-----eP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~ 798 (983)
+. .+ . +.+ +++.++++++.+++||.++=-+.+.. .+..+.+.|++.+.+=-..+++-....++.
T Consensus 165 ~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~ipvia~GGI~~~~-----d~~~~~~~Gadgv~vGsal~~~~~~~~~~~ 238 (253)
T 1thf_D 165 AGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKME-----HFLEAFLAGADAALAASVFHFREIDVRELK 238 (253)
T ss_dssp CSEEEEEETTTTTSCSCC-CHHHHHHHGGGCCSCEEEESCCCSHH-----HHHHHHHTTCSEEEESHHHHTTCSCHHHHH
T ss_pred CCEEEEEeccCCCCCCCC-CHHHHHHHHHhcCCCEEEECCCCCHH-----HHHHHHHcCChHHHHHHHHHcCCCCHHHHH
Confidence 32 11 1 111 57888999988899998876666654 355555678888776544444432355566
Q ss_pred HHHHHcCCcE
Q 041113 799 RWAQRHGKMA 808 (983)
Q Consensus 799 ~~A~~~gi~~ 808 (983)
+..++.|+++
T Consensus 239 ~~l~~~g~~~ 248 (253)
T 1thf_D 239 EYLKKHGVNV 248 (253)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHHcCCcc
Confidence 6678888864
No 473
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=69.02 E-value=36 Score=37.59 Aligned_cols=107 Identities=17% Similarity=0.209 Sum_probs=76.6
Q ss_pred eeEEEEeecC-CCCHHHHHHHHHHhhhcCCCEEEEe--c------cCC-----CChHHHHHHHHHHHHHc---CCCcEE-
Q 041113 643 SIKICALIDS-NKSPVEVASIATTLVEEGFTAIKLK--V------ARR-----ADPIKDAEVIQEVRKKV---GHRIEL- 704 (983)
Q Consensus 643 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~KiK--i------g~~-----~~~~~d~~~v~~vr~~~---g~~~~l- 704 (983)
.+|+.+-... .+.+..+.+.++.+.+.|.-.+-|. + |.. -+.++=+++|+++|++. |.++-|
T Consensus 152 ~~PviaD~dtGfG~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~Ii 231 (439)
T 3i4e_A 152 FAPIVADAEAGFGGVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLV 231 (439)
T ss_dssp CCCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCCeEEECCCCCCccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3676655432 2456678888999999999998774 2 210 13456688999998664 777655
Q ss_pred -EEEcCCC----------------------------CCHHHHHHHHhhccc-CCCceeecCCCChHHHHHHHhhc
Q 041113 705 -RVDANRN----------------------------WTYQEALEFGFLIKD-CDLQYIEEPVQNEEDIIKYCEES 749 (983)
Q Consensus 705 -~vDaN~~----------------------------~~~~~a~~~~~~l~~-~~i~~iEeP~~~~~~~~~l~~~~ 749 (983)
|.|+..+ ...++|++.++...+ .++.|+|-+.++.++++++.+..
T Consensus 232 ARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v 306 (439)
T 3i4e_A 232 ARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAI 306 (439)
T ss_dssp EEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHH
T ss_pred EEcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHh
Confidence 5888653 468999999888766 36789998888899998887654
No 474
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=68.95 E-value=13 Score=45.39 Aligned_cols=84 Identities=15% Similarity=0.035 Sum_probs=51.7
Q ss_pred ccchhhHHHHHHHHhcCC--ceEEEEccCCChhHHHHHHHHHHhcCCcEEeccccCccchhhhhhhhhhccccccccchh
Q 041113 70 SYTYCQMAEVLELVQGVN--KGLLLVGAVHNEDEIWAVLHLARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLD 147 (983)
Q Consensus 70 ~~~~~~i~~~~~~L~~Ak--rPvIl~G~g~~~~~~~~l~~lae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g 147 (983)
...+++++.+++.|++.+ +..++.|..........+.+|+..+|.+.+.... .. .... . +
T Consensus 320 iSWdeAl~~ia~~L~~i~~~~i~~~~s~~~t~E~~~~~~kl~~~lGt~n~d~~~-~~------~~~~--------~---~ 381 (783)
T 3i9v_3 320 ATWEEAFLALKEGLKEARGEEVGLYLAHDATLEEGLLASELAKALKTPHLDFQG-RT------AAPA--------S---L 381 (783)
T ss_dssp CCHHHHHHHHHHHHHTCCTTSEEEEECTTCCTTHHHHHHHHHHHTTCSCEEETT-CC------SSCG--------G---G
T ss_pred eCHHHHHHHHHHHHHhhccCCEEEEECCCCCHHHHHHHHHHHHHhCCCcccCCc-hh------hhhh--------c---c
Confidence 356788999999998765 4555555544433455788999999987665431 10 0000 0 1
Q ss_pred hhccCccccccCCCCEEEEeCCccccH
Q 041113 148 HALLSESVKDWIQFDVIIQIGSRITSK 174 (983)
Q Consensus 148 ~~~~~~~~~~~~~aDlvl~iG~~~~~~ 174 (983)
........+.+||+||++| .+...
T Consensus 382 --~~~~~~~di~~ad~Il~~G-Np~~~ 405 (783)
T 3i9v_3 382 --FPPASLEDLLQADFALVLG-DPTEE 405 (783)
T ss_dssp --SCBCCHHHHHHCSCEEEES-CHHHH
T ss_pred --CCCCCHHHHhhCCEEEEeC-ChhHh
Confidence 0111223467999999999 87543
No 475
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.83 E-value=32 Score=34.75 Aligned_cols=107 Identities=15% Similarity=0.248 Sum_probs=69.5
Q ss_pred HHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee-------e
Q 041113 661 SIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI-------E 733 (983)
Q Consensus 661 ~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i-------E 733 (983)
++++++++.|...+=+-.....+++.-.+.++.+++. ++.+++|.+ +.+++.+..+ .|..+| +
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~---g~~v~~~v~---t~eea~~a~~----~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH---GLLAMADCS---TVNEGISCHQ----KGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT---TCEEEEECS---SHHHHHHHHH----TTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC---CCEEEEecC---CHHHHHHHHh----CCCCEEEecCccCC
Confidence 3566677889998866544312344455677777763 688999976 6777765433 344444 1
Q ss_pred ---cCC-CChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEE
Q 041113 734 ---EPV-QNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVI 783 (983)
Q Consensus 734 ---eP~-~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~ 783 (983)
.+. ++++-++++++. ++|+...=-+.+.. .+..+.+.|++.+.+
T Consensus 162 ~~~~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~-----d~~~~~~~GadgV~V 209 (229)
T 3q58_A 162 GPITPVEPDLAMVTQLSHA-GCRVIAEGRYNTPA-----LAANAIEHGAWAVTV 209 (229)
T ss_dssp SSCCCSSCCHHHHHHHHTT-TCCEEEESSCCSHH-----HHHHHHHTTCSEEEE
T ss_pred CCCcCCCCCHHHHHHHHHc-CCCEEEECCCCCHH-----HHHHHHHcCCCEEEE
Confidence 122 267778888877 89988777776654 356666678888765
No 476
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=68.83 E-value=30 Score=34.30 Aligned_cols=136 Identities=17% Similarity=0.207 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCceee
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYIE 733 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iE 733 (983)
.++++..+.++.+.+.|.+.+-+..-. ....+.++.+|+ +++.+..+ --.+.+++...++ .+..++=
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~k~----~~~~~~i~~~~~---~~~~~gag--~vl~~d~~~~A~~----~GAd~v~ 88 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITLRT----EKGLEALKALRK---SGLLLGAG--TVRSPKEAEAALE----AGAAFLV 88 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEECSS----THHHHHHHHHTT---SSCEEEEE--SCCSHHHHHHHHH----HTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----hHHHHHHHHHhC---CCCEEEeC--eEeeHHHHHHHHH----cCCCEEE
Confidence 456677788888889999999887632 234577888777 55554444 3556655443332 3556766
Q ss_pred cCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCC-cCCHHHHHHHHHHHHHc-CCcEEeC
Q 041113 734 EPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSV-IGGFENAGLIARWAQRH-GKMAVVS 811 (983)
Q Consensus 734 eP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~-~GGl~~~~~~~~~A~~~-gi~~~~~ 811 (983)
-|-.+ .+..+.++..++|+..+ +.+.. ......+.|+|++.+-+.. .||+... .++.... +++++..
T Consensus 89 ~~~~d-~~v~~~~~~~g~~~i~G--~~t~~-----e~~~A~~~Gad~v~~fpa~~~gG~~~l---k~l~~~~~~ipvvai 157 (207)
T 2yw3_A 89 SPGLL-EEVAALAQARGVPYLPG--VLTPT-----EVERALALGLSALKFFPAEPFQGVRVL---RAYAEVFPEVRFLPT 157 (207)
T ss_dssp ESSCC-HHHHHHHHHHTCCEEEE--ECSHH-----HHHHHHHTTCCEEEETTTTTTTHHHHH---HHHHHHCTTCEEEEB
T ss_pred cCCCC-HHHHHHHHHhCCCEEec--CCCHH-----HHHHHHHCCCCEEEEecCccccCHHHH---HHHHhhCCCCcEEEe
Confidence 66443 44555555688888776 55543 3444556789998876643 4676543 3445555 7887655
Q ss_pred CC
Q 041113 812 AA 813 (983)
Q Consensus 812 ~~ 813 (983)
+.
T Consensus 158 GG 159 (207)
T 2yw3_A 158 GG 159 (207)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 477
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=67.97 E-value=37 Score=34.87 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=67.4
Q ss_pred HHHHHHhhhcCCCEEEEeccCC------CChHHHHHHHHHHHHH---cCCC--cEEEEEcC-CCCC-----HHHHHHHHh
Q 041113 660 ASIATTLVEEGFTAIKLKVARR------ADPIKDAEVIQEVRKK---VGHR--IELRVDAN-RNWT-----YQEALEFGF 722 (983)
Q Consensus 660 ~~~~~~~~~~G~~~~KiKig~~------~~~~~d~~~v~~vr~~---~g~~--~~l~vDaN-~~~~-----~~~a~~~~~ 722 (983)
.+-++++.+.|...+||.=+.. .+.++=.++|++++++ .|.+ +.=|.|+. ++.+ .+++++.++
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 6777888889999999975420 1224457788888776 3566 44567763 2332 789999999
Q ss_pred hcccCC--CceeecCCCChHHHHHHHhhcCCcEEe
Q 041113 723 LIKDCD--LQYIEEPVQNEEDIIKYCEESGLPVAL 755 (983)
Q Consensus 723 ~l~~~~--i~~iEeP~~~~~~~~~l~~~~~ipIa~ 755 (983)
.+++.| ..|+|-+ ++.+..+++.++.++|+-.
T Consensus 176 a~~eAGAd~i~~e~~-~~~~~~~~i~~~~~~P~n~ 209 (255)
T 2qiw_A 176 LMEQAGARSVYPVGL-STAEQVERLVDAVSVPVNI 209 (255)
T ss_dssp HHHHHTCSEEEECCC-CSHHHHHHHHTTCSSCBEE
T ss_pred HHHHcCCcEEEEcCC-CCHHHHHHHHHhCCCCEEE
Confidence 998865 5688874 4478999999998888643
No 478
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=67.86 E-value=4.9 Score=47.98 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=30.5
Q ss_pred CceEEEeCCCCCCh--------hhHHHHH----HHhh-CCCEEEEEcCCCCCCCCC
Q 041113 938 DNILLFLHGFLGTG--------EEWIPIM----KAVS-GSARCISIDLPGHGGSKM 980 (983)
Q Consensus 938 ~~~lv~lHG~~~~~--------~~w~~~~----~~l~-~~~~vi~~Dl~G~G~S~~ 980 (983)
.|.||+.||++.+. ..|.... ..|. ..|.|+.+|.||+|.|..
T Consensus 63 ~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g 118 (652)
T 2b9v_A 63 APILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 118 (652)
T ss_dssp EEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred ccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCC
Confidence 47788889988652 1233322 5554 469999999999999874
No 479
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=67.35 E-value=19 Score=37.32 Aligned_cols=119 Identities=12% Similarity=0.074 Sum_probs=67.2
Q ss_pred HHHHHhhhcCCCEEEEec--cCCCChHHHHHHHHHHHHHcC-CCcEEEEEcCC-------CCCHHHHHHHHhhcccCCCc
Q 041113 661 SIATTLVEEGFTAIKLKV--ARRADPIKDAEVIQEVRKKVG-HRIELRVDANR-------NWTYQEALEFGFLIKDCDLQ 730 (983)
Q Consensus 661 ~~~~~~~~~G~~~~KiKi--g~~~~~~~d~~~v~~vr~~~g-~~~~l~vDaN~-------~~~~~~a~~~~~~l~~~~i~ 730 (983)
..+++.++.|.+.+++.+ |. .+.++-++.++++++... .++.+.+...- ..+.++..+.++...+.+..
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~-~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGS-GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTS-TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEEEEecCC-cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 346667788999999998 64 233333444555554331 23445554221 11666555555666777888
Q ss_pred eeecCCC-ChHHHHHHHhhcCC-cE--EeCCCccCcCCChHHHHHhhcCCCceEE
Q 041113 731 YIEEPVQ-NEEDIIKYCEESGL-PV--ALDETIDKFQKDPLNMLEKYAHPGIVAI 781 (983)
Q Consensus 731 ~iEeP~~-~~~~~~~l~~~~~i-pI--a~dEs~~~~~~~~~~~~~~~~~~~~~~i 781 (983)
|+=-+++ +.++++++++..+. || ++|-+..+..+ .++.+...++.|++.+
T Consensus 175 ~vkt~~~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~-~l~~i~~~~~aGA~Gv 228 (263)
T 1w8s_A 175 AMKIKYTGDPKTFSWAVKVAGKVPVLMSGGPKTKTEED-FLKQVEGVLEAGALGI 228 (263)
T ss_dssp EEEEECCSSHHHHHHHHHHTTTSCEEEECCSCCSSHHH-HHHHHHHHHHTTCCEE
T ss_pred EEEEcCCCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHH-HHHHHHHHHHcCCeEE
Confidence 8887776 78888888876555 53 34443223221 2223333335566543
No 480
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=67.19 E-value=40 Score=37.21 Aligned_cols=106 Identities=14% Similarity=0.222 Sum_probs=74.9
Q ss_pred eEEEEeecC-CCCHHHHHHHHHHhhhcCCCEEEEe--c------cCC-----CChHHHHHHHHHHHHHc---CCCcEE--
Q 041113 644 IKICALIDS-NKSPVEVASIATTLVEEGFTAIKLK--V------ARR-----ADPIKDAEVIQEVRKKV---GHRIEL-- 704 (983)
Q Consensus 644 i~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~KiK--i------g~~-----~~~~~d~~~v~~vr~~~---g~~~~l-- 704 (983)
+|+.+-... .+.+..+.+.++.+.+.|.-.+-|. + |.. .+.++=+++|+++|++. |+++-|
T Consensus 153 lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiA 232 (435)
T 3lg3_A 153 LPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIA 232 (435)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 666554432 2455677888999999999988774 2 210 13455678899888664 777555
Q ss_pred EEEcCCC----------------------------CCHHHHHHHHhhccc-CCCceeecCCCChHHHHHHHhhc
Q 041113 705 RVDANRN----------------------------WTYQEALEFGFLIKD-CDLQYIEEPVQNEEDIIKYCEES 749 (983)
Q Consensus 705 ~vDaN~~----------------------------~~~~~a~~~~~~l~~-~~i~~iEeP~~~~~~~~~l~~~~ 749 (983)
|.|+..+ ...++|++.++...+ .++.|+|-+.++.++++++.+..
T Consensus 233 RTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v 306 (435)
T 3lg3_A 233 RTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAV 306 (435)
T ss_dssp EECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHH
T ss_pred EcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHh
Confidence 6898653 568999998887765 36789998887899998887654
No 481
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=66.88 E-value=95 Score=32.65 Aligned_cols=152 Identities=11% Similarity=0.068 Sum_probs=100.0
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC----CChHHHHHHHHHHHHHcCC-CcEEEEEcCCCCCHHHHHHHHhhcccCC
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR----ADPIKDAEVIQEVRKKVGH-RIELRVDANRNWTYQEALEFGFLIKDCD 728 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~----~~~~~d~~~v~~vr~~~g~-~~~l~vDaN~~~~~~~a~~~~~~l~~~~ 728 (983)
-+.+.+.+.++.+++.|...+=+--..+ .+.++-.+.++.+.+..+. ++.+++ .-++.+.++++++++..++.|
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia-Gvg~~~t~~ai~la~~a~~~G 103 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA-GAGSNATHEAVGLAKFAKEHG 103 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE-ECCCSSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE-eCCCCCHHHHHHHHHHHHHcC
Confidence 3678899999999999999875532211 2445566788888898877 889988 557788999999999998876
Q ss_pred Cce--eecCCC---ChHH----HHHHHhhcCCcEEeCCC----ccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHH
Q 041113 729 LQY--IEEPVQ---NEED----IIKYCEESGLPVALDET----IDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAG 795 (983)
Q Consensus 729 i~~--iEeP~~---~~~~----~~~l~~~~~ipIa~dEs----~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~ 795 (983)
... +=-|.. +.++ ++++.+.+++||.+=.. -.++ ..+.+.++.+..-.++-+|-+ +|-+....
T Consensus 104 adavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l---~~~~~~~La~~~pnivgiKds-sgd~~~~~ 179 (301)
T 3m5v_A 104 ADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEI---STDTIIKLFRDCENIYGVKEA-SGNIDKCV 179 (301)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC---CHHHHHHHHHHCTTEEEEEEC-SSCHHHHH
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC---CHHHHHHHHhcCCCEEEEEeC-CCCHHHHH
Confidence 542 223332 3444 36677888999986542 1122 123455554321245567876 46788777
Q ss_pred HHHHHHHHcCCcEEeCC
Q 041113 796 LIARWAQRHGKMAVVSA 812 (983)
Q Consensus 796 ~~~~~A~~~gi~~~~~~ 812 (983)
++.+.+ .++.++.+.
T Consensus 180 ~~~~~~--~~f~v~~G~ 194 (301)
T 3m5v_A 180 DLLAHE--PRMMLISGE 194 (301)
T ss_dssp HHHHHC--TTSEEEECC
T ss_pred HHHHhC--CCeEEEEcc
Confidence 777666 567755443
No 482
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=66.81 E-value=37 Score=36.06 Aligned_cols=109 Identities=15% Similarity=0.228 Sum_probs=68.0
Q ss_pred eEEEEeecCCCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHc-----------C---C-CcEEEEEc
Q 041113 644 IKICALIDSNKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKV-----------G---H-RIELRVDA 708 (983)
Q Consensus 644 i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~-----------g---~-~~~l~vDa 708 (983)
||+.-.++-+.+.+. +.+.++.||+.+-+.-.. .+.+++++..+++-+.. | . +-.+ |.
T Consensus 76 VPValHlDHg~~~e~----i~~ai~~GFtSVMiDgS~-~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v--~~ 148 (323)
T 2isw_A 76 IPICIHLDHGDTLES----VKMAIDLGFSSVMIDASH-HPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDV--QN 148 (323)
T ss_dssp SCEEEEEEEECSHHH----HHHHHHTTCSEEEECCTT-SCHHHHHHHHHHHHHHHHTTTCEEEEEESCC-----------
T ss_pred CcEEEECCCCCCHHH----HHHHHHcCCCeEEecCCC-CCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCc--cc
Confidence 555545544445543 556677899999998765 56788888877776542 1 1 1011 44
Q ss_pred CCCC-CHHHHHHHHhhccc----------CCCcee-ecCC--CChHHHHHHHhhcCCcEEeCCCc
Q 041113 709 NRNW-TYQEALEFGFLIKD----------CDLQYI-EEPV--QNEEDIIKYCEESGLPVALDETI 759 (983)
Q Consensus 709 N~~~-~~~~a~~~~~~l~~----------~~i~~i-EeP~--~~~~~~~~l~~~~~ipIa~dEs~ 759 (983)
...| ++++|.+|.++..- +|.+=+ .+|- -+++-++++++.+++|+.+.=.-
T Consensus 149 ~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgS 213 (323)
T 2isw_A 149 TVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSS 213 (323)
T ss_dssp -CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCC
T ss_pred ccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCC
Confidence 4456 79999999875532 233211 4565 46899999999999999987644
No 483
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=66.38 E-value=9.7 Score=43.92 Aligned_cols=114 Identities=13% Similarity=0.192 Sum_probs=76.1
Q ss_pred HHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEE-EcCCCCCHHHHHHHHhhcccCCCcee-----
Q 041113 659 VASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRV-DANRNWTYQEALEFGFLIKDCDLQYI----- 732 (983)
Q Consensus 659 ~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~v-DaN~~~~~~~a~~~~~~l~~~~i~~i----- 732 (983)
..+.++.+++.|+..+-+..+.. ++....+.++++|+.+ +++.+.+ +. -+.++|.+..+ .|+.+|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G-~~~~~~~~i~~i~~~~-~~~pvi~~~v---~t~~~a~~l~~----aGad~I~vg~~ 326 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQG-NSVYQIAMVHYIKQKY-PHLQVIGGNV---VTAAQAKNLID----AGVDGLRVGMG 326 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC-CSHHHHHHHHHHHHHC-TTCEEEEEEE---CSHHHHHHHHH----HTCSEEEECSS
T ss_pred hHHHHHHHHHcCCCEEEeeccCC-cchhHHHHHHHHHHhC-CCCceEeccc---chHHHHHHHHH----cCCCEEEECCC
Confidence 45677778889999999977652 4555678899999999 6777765 33 56676655543 333333
Q ss_pred -------------ecCCC-ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCC
Q 041113 733 -------------EEPVQ-NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPS 786 (983)
Q Consensus 733 -------------EeP~~-~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~ 786 (983)
-.|.. ....++++++..++||.++=-+.+..| +.+++..|++.+.+=-.
T Consensus 327 ~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~d-----i~kala~GAd~V~iG~~ 389 (514)
T 1jcn_A 327 CGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGH-----VVKALALGASTVMMGSL 389 (514)
T ss_dssp CSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHH-----HHHHHHTTCSEEEESTT
T ss_pred CCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHH-----HHHHHHcCCCeeeECHH
Confidence 11111 245567788888999999877777543 45555678888876443
No 484
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=65.93 E-value=43 Score=40.24 Aligned_cols=119 Identities=11% Similarity=-0.045 Sum_probs=62.4
Q ss_pred ccchhhHHHHHHHHhcCC------ceEEEEccCCChhHHHHHHHHHHh-cCCcEEeccccCccchhhhhhhhhhcccccc
Q 041113 70 SYTYCQMAEVLELVQGVN------KGLLLVGAVHNEDEIWAVLHLARH-IRWPVVADILSGLRLRKLLASFLETEQNILF 142 (983)
Q Consensus 70 ~~~~~~i~~~~~~L~~Ak------rPvIl~G~g~~~~~~~~l~~lae~-l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~ 142 (983)
...+++++.+++.|++.+ ...++.|+.........+.+|+.. +|.+.+.... ... .+........
T Consensus 79 isWdeAl~~ia~~l~~~~~~~G~~~i~~~~~~~~~~e~~~~~~~~~~~~~gs~n~~~~~-~~c----~~~~~~~~~~--- 150 (723)
T 2nap_A 79 VSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESYVANKIFKGGFGTNNVDGNP-RLC----MASAVGGYVT--- 150 (723)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTSCHHHHHHHHHHHHHTSCCCCEEEGG-GGT----THHHHHHHHH---
T ss_pred ecHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcccchhhHHHHHHHHHhcCCCceeCCC-ccc----cchHhHHHHh---
Confidence 345788899988887643 344444433333333467789998 8877655431 100 0100001111
Q ss_pred ccchhhhccCccccccCCCCEEEEeCCccccHHHHH--HHHh--cC--CceEEEEcCCCCCC
Q 041113 143 LDHLDHALLSESVKDWIQFDVIIQIGSRITSKRISQ--MIEE--CF--PCTYILVDNHPCRH 198 (983)
Q Consensus 143 ~g~~g~~~~~~~~~~~~~aDlvl~iG~~~~~~~~~~--~~~~--~~--~~~~i~id~d~~~~ 198 (983)
.+|..........+.+||+||++|+.+....... ++.. -. ..++|.||+.....
T Consensus 151 --~~G~~~~~~~~~d~~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~t~t 210 (723)
T 2nap_A 151 --SFGKDEPMGTYADIDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRRTNT 210 (723)
T ss_dssp --HHSSCSCSSCGGGGGTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBCCGG
T ss_pred --ccCCCCCCCChhhHhHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcCCch
Confidence 1121111122245789999999999875533221 2211 12 35788899766544
No 485
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=65.78 E-value=3.1 Score=42.94 Aligned_cols=138 Identities=16% Similarity=0.179 Sum_probs=80.8
Q ss_pred HHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCC-cEEEEEcCC----------CCCH---HHHHHHHhhcccC
Q 041113 662 IATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHR-IELRVDANR----------NWTY---QEALEFGFLIKDC 727 (983)
Q Consensus 662 ~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~-~~l~vDaN~----------~~~~---~~a~~~~~~l~~~ 727 (983)
.++++++.|... +-+|. ..-.+.+.+..+++.+|.+ +.+.+|++. +|.. ....++++.+++.
T Consensus 89 ~~~~~~~~Gad~--V~lg~--~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~ 164 (252)
T 1ka9_F 89 DARKLLLSGADK--VSVNS--AAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL 164 (252)
T ss_dssp HHHHHHHHTCSE--EEECH--HHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcCCCE--EEECh--HHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc
Confidence 455666678665 45564 2334455688888888754 578899852 3421 1122233333333
Q ss_pred CCc--ee-----ecCCC--ChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHH
Q 041113 728 DLQ--YI-----EEPVQ--NEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIA 798 (983)
Q Consensus 728 ~i~--~i-----EeP~~--~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~ 798 (983)
+.. .+ +.... +++.++++++.+++||.+.=-+.+.. .+..+.+.|++.+.+=-..+++-....++.
T Consensus 165 G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~-----d~~~~~~~Gadgv~vgsal~~~~~~~~~~~ 239 (252)
T 1ka9_F 165 GAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRME-----HFLEAFQAGAEAALAASVFHFGEIPIPKLK 239 (252)
T ss_dssp TCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHH-----HHHHHHHTTCSEEEESHHHHTTSSCHHHHH
T ss_pred CCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHH-----HHHHHHHCCCHHHHHHHHHHcCCCCHHHHH
Confidence 322 11 11111 57888999999999998876666653 355555678888776444444433455566
Q ss_pred HHHHHcCCcE
Q 041113 799 RWAQRHGKMA 808 (983)
Q Consensus 799 ~~A~~~gi~~ 808 (983)
+.++..|+.+
T Consensus 240 ~~l~~~~~~~ 249 (252)
T 1ka9_F 240 RYLAEKGVHV 249 (252)
T ss_dssp HHHHHTTCCB
T ss_pred HHHHHCCCCc
Confidence 6778888863
No 486
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=65.65 E-value=35 Score=41.02 Aligned_cols=117 Identities=9% Similarity=0.024 Sum_probs=62.2
Q ss_pred ccchhhHHHHHHHHhcCC------ceEEEEccCCC-hhHHHHHHHHHH-hcCCcEEeccccCccchhhhhhhhhhccccc
Q 041113 70 SYTYCQMAEVLELVQGVN------KGLLLVGAVHN-EDEIWAVLHLAR-HIRWPVVADILSGLRLRKLLASFLETEQNIL 141 (983)
Q Consensus 70 ~~~~~~i~~~~~~L~~Ak------rPvIl~G~g~~-~~~~~~l~~lae-~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~ 141 (983)
...+++++.+++.|++.+ ...++.|.+.. ......+.+|+. .+|.+-+.+.. .... +..-.....
T Consensus 78 isWdeAl~~ia~~l~~i~~~~G~~~i~~~~~~~~~~~e~~~~~~~~~~~~~Gs~n~~~~~-~~c~----~~~~~~~~~-- 150 (715)
T 2iv2_X 78 VSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCA-RVXH----GPSVAGLHQ-- 150 (715)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCGGGEEEECCSSTTCHHHHHHHHHHHHHTTCCCCEECSS-CCSC----CSSSCSHHH--
T ss_pred eeHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCcCcHHHHHHHHHHHHhcCCCcCCCCC-ccch----hHHHHHHHh--
Confidence 345788898888887642 33444444443 333457889998 99988665431 1100 000000010
Q ss_pred cccchhhhccCccccccCCCCEEEEeCCccccHHHH--HHHHh--cCCceEEEEcCCCC
Q 041113 142 FLDHLDHALLSESVKDWIQFDVIIQIGSRITSKRIS--QMIEE--CFPCTYILVDNHPC 196 (983)
Q Consensus 142 ~~g~~g~~~~~~~~~~~~~aDlvl~iG~~~~~~~~~--~~~~~--~~~~~~i~id~d~~ 196 (983)
.+|..........+.+||+||++|+.+...... .++.. -...++|.||+...
T Consensus 151 ---~~G~~~~~~~~~di~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~t 206 (715)
T 2iv2_X 151 ---SVGNGAMSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKI 206 (715)
T ss_dssp ---HHSCCSCSSCGGGGGGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ---hcCCCCCCCCHhHHhcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 112111112234578999999999987543321 12221 12347888987654
No 487
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=65.30 E-value=49 Score=35.43 Aligned_cols=156 Identities=18% Similarity=0.199 Sum_probs=96.2
Q ss_pred CCCHHHHHHHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhh-cccCCC--
Q 041113 653 NKSPVEVASIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFL-IKDCDL-- 729 (983)
Q Consensus 653 ~~~~~~~~~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~-l~~~~i-- 729 (983)
..+.+..++++.++.+.|-..+.+-+. + .++.+.+..||+.+ ++.|..|-+ |++..|+..++. ++.+.|
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRvavp---~-~~~a~al~~I~~~~--~vPlvaDiH--f~~~lal~a~e~G~dklRINP 113 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVAVP---H-KEDVEALEEIVKKS--PMPVIADIH--FAPSYAFLSMEKGVHGIRINP 113 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEECC---S-HHHHHHHHHHHHHC--SSCEEEECC--SCHHHHHHHHHTTCSEEEECH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCCC---C-hHHHHHHHHHHhcC--CCCEEEeCC--CCHHHHHHHHHhCCCeEEECC
Confidence 357899999999999999999998774 2 67789999999986 689999975 455666665554 444322
Q ss_pred ceeecCCCChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHHHHHcCCcEE
Q 041113 730 QYIEEPVQNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARWAQRHGKMAV 809 (983)
Q Consensus 730 ~~iEeP~~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~A~~~gi~~~ 809 (983)
--|-..- ..+.+.+..+..++||--|=+.-++.. +.+.++..... -+=+..+++.+++|++.|+.-+
T Consensus 114 GNig~~~-~~~~vv~~ak~~~~piRIGvN~GSL~~---~ll~~yg~~~~---------eamVeSAl~~~~~~e~~gf~~i 180 (366)
T 3noy_A 114 GNIGKEE-IVREIVEEAKRRGVAVRIGVNSGSLEK---DLLEKYGYPSA---------EALAESALRWSEKFEKWGFTNY 180 (366)
T ss_dssp HHHSCHH-HHHHHHHHHHHHTCEEEEEEEGGGCCH---HHHHHHSSCCH---------HHHHHHHHHHHHHHHHTTCCCE
T ss_pred cccCchh-HHHHHHHHHHHcCCCEEEecCCcCCCH---HHHHhcCCCCH---------HHHHHHHHHHHHHHHhCCCCeE
Confidence 1111100 123344456677999999877777653 33444432111 1225677777888888877333
Q ss_pred eCCCCchH--HHHHHHHHHHhh
Q 041113 810 VSAAFESG--LGLSAYIIFSSY 829 (983)
Q Consensus 810 ~~~~~es~--ig~~a~~~laa~ 829 (983)
+=++-.|+ ....++-.|+..
T Consensus 181 viS~K~S~v~~~i~ayr~la~~ 202 (366)
T 3noy_A 181 KVSIKGSDVLQNVRANLIFAER 202 (366)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH
T ss_pred EEeeecCChHHHHHHHHHHHhc
Confidence 32222232 334455555544
No 488
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=64.75 E-value=14 Score=43.27 Aligned_cols=111 Identities=10% Similarity=-0.078 Sum_probs=70.0
Q ss_pred hHHHHHhhhhccCceEEEEEccc-hhhhccchHHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccCC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDI-SFLHDTNGLAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTTH 406 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDG-sf~~~~~eL~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (983)
+.-+|.|.+.+++ +.+|++-=| ++.-.++.+.+|.. .++|+++|.-.......-+.... .+ ...+..
T Consensus 75 A~~~A~GyAr~tG-~~v~~~tsGpG~~N~~~gi~~A~~--~~vPlv~itg~~~~~~~~~~~~~--------~~-~~~~~~ 142 (570)
T 2vbf_A 75 ASYMADGYARTKK-AAAFLTTFGVGELSAINGLAGSYA--ENLPVVEIVGSPTSKVQNDGKFV--------HH-TLADGD 142 (570)
T ss_dssp HHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHHHHHH--TTCCEEEEEEECCHHHHHHTCCC--------TT-SCSSSC
T ss_pred HHHHHHHHHHHhC-CeEEEEcCCCCHHHHHHHHHHHhh--hCCCEEEEeCCCCHHHhhccccc--------ee-eccccc
Confidence 6678888877767 777665333 44456788998887 89999999977654322110000 00 000000
Q ss_pred CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhh----ccCCCEEEEEEcC
Q 041113 407 NISIQNLCLAHGLNHVQVKTKVELEEALSMSQ----HLGTDRVIEVESC 451 (983)
Q Consensus 407 ~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~----~~~~p~lIeV~~~ 451 (983)
--+...+.+.+-.....+++ +++...+++++ ...||+.|++..|
T Consensus 143 ~~~~~~~~~~~tk~~~~v~~-~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 143 FKHFMKMHEPVTAARTLLTA-ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp CCHHHHHTGGGCSEEEECCT-TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred hHHHHHHhhhhEEEEEEECc-ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 11356777788778888888 66666666554 4569999999865
No 489
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=64.41 E-value=91 Score=33.03 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEec--cC--CCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKV--AR--RADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKi--g~--~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
-+.+.+.+.++.+++.|...+=+-- |. ..+.++-.+.++.+++..+.++.+++=... +.++++++++..++.|.
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIELGKSAIDSGA 107 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHHHHHHHHcCC
Confidence 3678899999999999999865431 11 024556677888889888888999987655 99999999999988775
Q ss_pred cee--ecCCC---ChHHH----HHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHH
Q 041113 730 QYI--EEPVQ---NEEDI----IKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARW 800 (983)
Q Consensus 730 ~~i--EeP~~---~~~~~----~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~ 800 (983)
..+ =-|.. +.+++ +++.+.+++||.+=. ..+.- ..+.+.++.+ .-.++-+|-+- |.+....++.+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn-~tg~l--~~~~~~~La~-~pnIvgiKdss-gd~~~~~~~~~~ 182 (314)
T 3d0c_A 108 DCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF-KDAHL--SDDVIKELAP-LDKLVGIKYAI-NDIQRVTQVMRA 182 (314)
T ss_dssp SEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE-CCTTS--CTHHHHHHTT-CTTEEEEEECC-CCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe-CCCCc--CHHHHHHHHc-CCCEEEEEeCC-CCHHHHHHHHHh
Confidence 433 23432 34443 567788899998754 22211 1234555553 22455677554 557666666544
Q ss_pred HHHc-CCcEEeC
Q 041113 801 AQRH-GKMAVVS 811 (983)
Q Consensus 801 A~~~-gi~~~~~ 811 (983)
+... ++.++.+
T Consensus 183 ~~~~~~f~v~~G 194 (314)
T 3d0c_A 183 VPKSSNVAFICG 194 (314)
T ss_dssp SCGGGCCEEEET
T ss_pred cCCCCCEEEEEe
Confidence 3211 5665433
No 490
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=64.23 E-value=7.8 Score=41.05 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHhhcccCCCceeecCCC----------C-hHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCce
Q 041113 711 NWTYQEALEFGFLIKDCDLQYIEEPVQ----------N-EEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIV 779 (983)
Q Consensus 711 ~~~~~~a~~~~~~l~~~~i~~iEeP~~----------~-~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~ 779 (983)
.++.++.+++++.|++.++..||.=.+ + ++-++.+++..++|++.-= .+. ..+....+.|++
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~--~n~-----~~i~~a~~~G~~ 94 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV--PNM-----KGYEAAAAAHAD 94 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC--SSH-----HHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe--CCH-----HHHHHHHHCCCC
Confidence 379999999999999999999998432 1 2223445444577884321 222 346667778888
Q ss_pred EEEEcC--C-----------CcCCHHHHHHHHHHHHHcCCcEE
Q 041113 780 AIVIKP--S-----------VIGGFENAGLIARWAQRHGKMAV 809 (983)
Q Consensus 780 ~i~~k~--~-----------~~GGl~~~~~~~~~A~~~gi~~~ 809 (983)
.+.+.. + .-+-+..+.+++++|+++|+.+.
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 777653 2 12256777888999999999875
No 491
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=64.15 E-value=1.3e+02 Score=31.79 Aligned_cols=154 Identities=12% Similarity=0.151 Sum_probs=100.5
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
-+.+.+.+.++.+++.|...+=+--..+ .+.++-.+.++.+.+.. .++.+++ .-++-+.++++++++..++.|.
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpVia-Gvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIV-GVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEE-ECCCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEE-ecCCCCHHHHHHHHHHHHHcCC
Confidence 3678899999999999999875432111 24556677888888888 6889988 5567799999999998888664
Q ss_pred ceee--cCCC--ChHHH----HHHHhhcC--CcEEeCCC----ccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHH
Q 041113 730 QYIE--EPVQ--NEEDI----IKYCEESG--LPVALDET----IDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAG 795 (983)
Q Consensus 730 ~~iE--eP~~--~~~~~----~~l~~~~~--ipIa~dEs----~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~ 795 (983)
..+= -|.. +.+++ +++.+.++ +||.+=.. -.++ ..+.+.++.+.--.++-+|-+-+|.+....
T Consensus 104 davlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l---~~~~~~~La~~~pnIvgiKd~~~~~~~~~~ 180 (313)
T 3dz1_A 104 AGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVM---TPKVIRQIVMDSASCVMLKHEDWPGLEKIT 180 (313)
T ss_dssp SEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCC---CHHHHHHHHHHCSSEEEEEECCSSCHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCC---CHHHHHHHHHhCCCEEEEEcCCCCCHHHHH
Confidence 3221 2221 34443 66778888 99987442 1122 123555555322245668865457788888
Q ss_pred HHHHHHHH---cCCcEEeCC
Q 041113 796 LIARWAQR---HGKMAVVSA 812 (983)
Q Consensus 796 ~~~~~A~~---~gi~~~~~~ 812 (983)
++.+.+.. -++.++.+.
T Consensus 181 ~~~~~~~~~~~~~f~v~~G~ 200 (313)
T 3dz1_A 181 TLRGFQKDGSLRPLSILCGN 200 (313)
T ss_dssp HHHHHHHHTSSCCCEEEECG
T ss_pred HHHHhcCccCCCCeEEEeCC
Confidence 88777653 467655443
No 492
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=64.15 E-value=12 Score=44.10 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=63.1
Q ss_pred hHHHHHhhhhccCceEEEEEccchhhhccch--HHHHHhhccCCCEEEEEEeCCCCccccCCCCCCCCCccccccccccC
Q 041113 328 LLSTAIGFAVGCNKHVLCVVGDISFLHDTNG--LAILKQRMKRKPILMLVINNHGGAIFSLLPIADRTEPRILDQYFYTT 405 (983)
Q Consensus 328 ~lpaaiGaalA~~~~vv~i~GDGsf~~~~~e--L~Ta~~~~~~lpv~iiV~NN~g~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (983)
.++.|.|++++--+|++.+.++. +.-+.| +..++. .++|+++++ .++|+ .-.. .. +.
T Consensus 373 ~~~~a~G~A~~G~rp~~~~~~~F--~~~a~dqi~~~~a~--~~~pvv~~~-~~~g~--~g~~-G~-------------tH 431 (621)
T 2o1s_A 373 AVTFAAGLAIGGYKPIVAIYSTF--LQRAYDQVLHDVAI--QKLPVLFAI-DRAGI--VGAD-GQ-------------TH 431 (621)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTG--GGGGHHHHHHTTTT--TTCCCEEEE-ESCBC--CCTT-CG-------------GG
T ss_pred HHHHHHHHHHCCCEEEEEehHhH--HHHHHHHHHHHHHh--cCCCEEEEE-ECCcc--CCCC-CC-------------cc
Confidence 57788888886557777787774 333322 333454 789987666 55544 1100 00 00
Q ss_pred C-CCCHHHHHHHcCCceeeeCCHHHHHHHHHhhhcc-CCCEEEEE
Q 041113 406 H-NISIQNLCLAHGLNHVQVKTKVELEEALSMSQHL-GTDRVIEV 448 (983)
Q Consensus 406 ~-~~df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~-~~p~lIeV 448 (983)
+ ..|...+..--|+.-+...+..|+...++.+++. ++|++|-.
T Consensus 432 ~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~~a~~~~~~Pv~i~~ 476 (621)
T 2o1s_A 432 QGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRY 476 (621)
T ss_dssp CBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHHHHCCSSCEEEEC
T ss_pred CchHHHHHHhcCCCCEEEecCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 1 1233333333388899999999999999999987 89988854
No 493
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=63.97 E-value=13 Score=40.47 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=52.5
Q ss_pred HHHHHHHHHhhhcCCCEEEEeccCC-------------------CChHH----HHHHHHHHHHHcCCCc-EEEEEcCC--
Q 041113 657 VEVASIATTLVEEGFTAIKLKVARR-------------------ADPIK----DAEVIQEVRKKVGHRI-ELRVDANR-- 710 (983)
Q Consensus 657 ~~~~~~~~~~~~~G~~~~KiKig~~-------------------~~~~~----d~~~v~~vr~~~g~~~-~l~vDaN~-- 710 (983)
++..+.++.+++.||..+-|+.+.. .+++. =++.|++||+++|++. -+++-++.
T Consensus 152 ~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~ 231 (358)
T 4a3u_A 152 DDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEI 231 (358)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCccc
Confidence 4566777888899999999998542 12221 2578999999999874 34554432
Q ss_pred --C---CCHHHHHHHHhhcccCCCceee
Q 041113 711 --N---WTYQEALEFGFLIKDCDLQYIE 733 (983)
Q Consensus 711 --~---~~~~~a~~~~~~l~~~~i~~iE 733 (983)
. .+.++.+.+++.+++.++.+++
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (358)
T 4a3u_A 232 QGTVDSHPEQVFIPAAKMLSDLDIAFLG 259 (358)
T ss_dssp TTBCCSSTHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCcccchHHHHHHHHHhhhccCccccc
Confidence 2 2455667778888887776655
No 494
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=63.77 E-value=60 Score=34.53 Aligned_cols=154 Identities=13% Similarity=0.042 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHhhhcCCCEEEEeccCC----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCc
Q 041113 655 SPVEVASIATTLVEEGFTAIKLKVARR----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQ 730 (983)
Q Consensus 655 ~~~~~~~~~~~~~~~G~~~~KiKig~~----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~ 730 (983)
+.+.+.+.++.+++.|...+=+--..+ .+.++-.+.++.+++..+.++.+++ .-++-+.++++++++..++.|..
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA-GVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE-ECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCC
Confidence 678889999999999999876542111 2455667788888998888899988 45678999999999988886532
Q ss_pred --------eeecCCCChHH----HHHHHhhcCCcEEeCCCcc-C-cCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHH
Q 041113 731 --------YIEEPVQNEED----IIKYCEESGLPVALDETID-K-FQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGL 796 (983)
Q Consensus 731 --------~iEeP~~~~~~----~~~l~~~~~ipIa~dEs~~-~-~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~ 796 (983)
|+--|.. .++ ++++.+.+++||.+=..=. + -.+-..+.+.++.+..-.++-+|-+ +|-+....+
T Consensus 109 avlv~~P~y~~kp~~-~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKds-sgd~~~~~~ 186 (318)
T 3qfe_A 109 YVLVLPPAYFGKATT-PPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLT-CASVGKITR 186 (318)
T ss_dssp EEEECCCCC---CCC-HHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEES-SCCHHHHHH
T ss_pred EEEEeCCcccCCCCC-HHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeC-CCCHHHHHH
Confidence 3333333 343 3677788899998754311 1 0111224555555412245668876 466776666
Q ss_pred HHHHHHHcCCcEEeC
Q 041113 797 IARWAQRHGKMAVVS 811 (983)
Q Consensus 797 ~~~~A~~~gi~~~~~ 811 (983)
+.+.....++.++.+
T Consensus 187 ~~~~~~~~~f~v~~G 201 (318)
T 3qfe_A 187 LAATLPPAAFSVFGG 201 (318)
T ss_dssp HHHHSCGGGCEEEES
T ss_pred HHHhcCCCCEEEEEe
Confidence 655433345665544
No 495
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=63.62 E-value=56 Score=34.72 Aligned_cols=151 Identities=12% Similarity=0.066 Sum_probs=97.8
Q ss_pred CCHHHHHHHHHHhhhcCCCEEEEeccCC----CChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCC
Q 041113 654 KSPVEVASIATTLVEEGFTAIKLKVARR----ADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDL 729 (983)
Q Consensus 654 ~~~~~~~~~~~~~~~~G~~~~KiKig~~----~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i 729 (983)
-+.+.+.+.++.+++.|...+=+--..+ .+.++-.+.++.+.+..+.++.+++=.. . +.++++++++..++.|.
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATSTAIELGNAAKAAGA 107 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHHHHHHHHHHHHhcCC
Confidence 3678899999999999998865432111 2445566788888888888899998874 5 99999999999988765
Q ss_pred ceee--cCCC---ChHHH----HHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEcCCCcCCHHHHHHHHHH
Q 041113 730 QYIE--EPVQ---NEEDI----IKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIKPSVIGGFENAGLIARW 800 (983)
Q Consensus 730 ~~iE--eP~~---~~~~~----~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~GGl~~~~~~~~~ 800 (983)
..+= -|.. +.+++ +++.+.+++||.+=..-.++. .+.+.++.+ --.++-+|-+ +|.+....++++.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~---~~~~~~La~-~pnIvgiKds-sgd~~~~~~~~~~ 182 (316)
T 3e96_A 108 DAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEIS---DRVLVDLAP-LQNLVGVKYA-INDLPRFAKVVRS 182 (316)
T ss_dssp SEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSC---THHHHHHTT-CTTEEEEEEC-CCCHHHHHHHHTT
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCC---HHHHHHHHc-CCCEEEEEeC-CCCHHHHHHHHHh
Confidence 4322 3432 34443 667788899998865312222 234566653 2246668876 4667766666544
Q ss_pred HHHcCCc-EEeC
Q 041113 801 AQRHGKM-AVVS 811 (983)
Q Consensus 801 A~~~gi~-~~~~ 811 (983)
+...++. ++.+
T Consensus 183 ~~~~~f~~v~~G 194 (316)
T 3e96_A 183 IPEEHQIAWICG 194 (316)
T ss_dssp SCGGGCCEEEET
T ss_pred cCCCCceEEEeC
Confidence 3322344 4444
No 496
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=63.47 E-value=48 Score=33.87 Aligned_cols=122 Identities=15% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHhhh--cCCCEEEEeccCCC--ChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccC
Q 041113 652 SNKSPVEVASIATTLVE--EGFTAIKLKVARRA--DPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDC 727 (983)
Q Consensus 652 ~~~~~~~~~~~~~~~~~--~G~~~~KiKig~~~--~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 727 (983)
+..+.++.+..++-.++ .|-+-||+.|-... -..+-.+.+++.++....++..+.-.+.. +. .++++++.
T Consensus 82 g~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd--~~----~akrl~~~ 155 (265)
T 1wv2_A 82 GCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDD--PI----IARQLAEI 155 (265)
T ss_dssp TCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSC--HH----HHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCC--HH----HHHHHHHh
Confidence 45678887777776666 47889999985310 01234566777777766777766433332 33 45566777
Q ss_pred CCceeec-CC--------CChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEEc
Q 041113 728 DLQYIEE-PV--------QNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVIK 784 (983)
Q Consensus 728 ~i~~iEe-P~--------~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~k 784 (983)
+...++- +- .+++-++.+++..++||..+=-+.+..| .....+.|+|.+.+-
T Consensus 156 G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsD-----Aa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 156 GCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASD-----AAIAMELGCEAVLMN 216 (265)
T ss_dssp CCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHH-----HHHHHHHTCSEEEES
T ss_pred CCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHH-----HHHHHHcCCCEEEEC
Confidence 8777743 22 1577778898888999988777887653 566667788887754
No 497
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=62.95 E-value=12 Score=41.05 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=26.8
Q ss_pred CceEEEeCCCCCChhhHHHHH-------------HHhhCCCEEEEEcCCCCCCC
Q 041113 938 DNILLFLHGFLGTGEEWIPIM-------------KAVSGSARCISIDLPGHGGS 978 (983)
Q Consensus 938 ~~~lv~lHG~~~~~~~w~~~~-------------~~l~~~~~vi~~Dl~G~G~S 978 (983)
.|.|||+||++.+...|.... -.....+.|+++|.+|++..
T Consensus 174 ~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 174 YPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred ccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 478999999997654332111 11123479999999987643
No 498
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=62.53 E-value=2.5 Score=44.22 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=63.8
Q ss_pred HHhcCCcEEeccccCccchhhhhhhhhhccccccccchhhhccCccccccCCCCEEEEeCCccccHHHHHHHHhcCCceE
Q 041113 109 ARHIRWPVVADILSGLRLRKLLASFLETEQNILFLDHLDHALLSESVKDWIQFDVIIQIGSRITSKRISQMIEECFPCTY 188 (983)
Q Consensus 109 ae~l~~Pv~~t~~sg~~~~~~kg~~~~~hp~~~~~g~~g~~~~~~~~~~~~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~ 188 (983)
+-+.++|++-.. | +|+ .|-+|+-+.. .+. ...+-.+.++.+|+||.+.+.+-+.-+++..+. -.++
T Consensus 234 cvk~~VPfVLAG-S-IRD---DGPLPdvitd-----v~~--AQ~~mr~~~~~a~~vimlaTmLHSIAtGNm~Ps--~v~~ 299 (345)
T 3c2q_A 234 CIKNNIPYVLAG-S-IRD---DGPIPDVITD-----SMV--AQDKMRTTVMDKKMVIMLSTLLHSVATGNLMPS--YIKT 299 (345)
T ss_dssp HHHTTCCEEEEC-C-TTC---SSCCTTCBCB-----HHH--HHHHHHHHHTTCSEEEEESCHHHHHHHHTTCCT--TSEE
T ss_pred HHhCCCCEEEEe-e-ccC---CCCCCccccc-----HHH--HHHHHHHHhccCCchHHHHHHHHHHHhcccCcc--cceE
Confidence 456788887754 2 333 2445544322 111 122333467899999999999865555433222 1358
Q ss_pred EEEcCCCCCC----CCCCCeeEEEEcCHHHHHHHHHhcc
Q 041113 189 ILVDNHPCRH----DPSHSVTHRIQSTIVQFVDFLLKVQ 223 (983)
Q Consensus 189 i~id~d~~~~----~~~~~~~~~i~~d~~~~l~~L~~~~ 223 (983)
+-||++|..+ ++..-..+.++.|+.+|+..|.+.|
T Consensus 300 ~cVDInp~~VtKL~DRGs~qa~giVTdvg~Fl~~L~~~L 338 (345)
T 3c2q_A 300 VCVDIQPSTVTKLMDRGTSQAIGVVTDVGVFLVLLLKEL 338 (345)
T ss_dssp EEEESCHHHHHHHHHTCCSSEEEEESCHHHHHHHHHHHH
T ss_pred EEEECCHHHhhhhhccCceeEEEEEecHHHHHHHHHHHH
Confidence 8999998544 3444566889999999999986654
No 499
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=62.17 E-value=33 Score=28.46 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=37.5
Q ss_pred CHHHHHHHcCCceeeeCCHHHHHHHHHhhhccCCCEEEEEEcCcc
Q 041113 409 SIQNLCLAHGLNHVQVKTKVELEEALSMSQHLGTDRVIEVESCID 453 (983)
Q Consensus 409 df~~la~a~G~~~~~v~~~~eL~~aL~~a~~~~~p~lIeV~~~~~ 453 (983)
.|..+.+--|.+..+|.++.||++.+++..+.-...++-|.+|..
T Consensus 17 kfkdiikkngfkvrtvrspqelkdsieelvkkynativvvvvddk 61 (134)
T 2l69_A 17 KFKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDK 61 (134)
T ss_dssp HHHHHHHHTTCEEEEECSHHHHHHHHHHHTTCCCCEEEEEECSSH
T ss_pred HHHHHHHhcCceEEEecCHHHHHHHHHHHHHHhCCeEEEEEEccH
Confidence 488899999999999999999999999998755556666777654
No 500
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=61.90 E-value=29 Score=35.10 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=69.2
Q ss_pred HHHHHhhhcCCCEEEEeccCCCChHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHhhcccCCCcee-------e
Q 041113 661 SIATTLVEEGFTAIKLKVARRADPIKDAEVIQEVRKKVGHRIELRVDANRNWTYQEALEFGFLIKDCDLQYI-------E 733 (983)
Q Consensus 661 ~~~~~~~~~G~~~~KiKig~~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~i-------E 733 (983)
++++++++.|...+=+-.....+++.-.+.++.+++. ++.+++|.+ +.+++.+..+ .+..+| +
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~---g~~v~~~v~---t~eea~~a~~----~Gad~Ig~~~~g~t 161 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH---HLLTMADCS---SVDDGLACQR----LGADIIGTTMSGYT 161 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT---TCEEEEECC---SHHHHHHHHH----TTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC---CCEEEEeCC---CHHHHHHHHh----CCCCEEEEcCccCC
Confidence 3566677889998866544212344455667777763 688999976 6777665433 344343 1
Q ss_pred ---cCC-CChHHHHHHHhhcCCcEEeCCCccCcCCChHHHHHhhcCCCceEEEE
Q 041113 734 ---EPV-QNEEDIIKYCEESGLPVALDETIDKFQKDPLNMLEKYAHPGIVAIVI 783 (983)
Q Consensus 734 ---eP~-~~~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~~~~~~~~~i~~ 783 (983)
.+. ++++-++++++. ++|+...=-+.+.. .+..+.+.|++.+.+
T Consensus 162 ~~~~~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~-----d~~~~~~~GadgV~V 209 (232)
T 3igs_A 162 TPDTPEEPDLPLVKALHDA-GCRVIAEGRYNSPA-----LAAEAIRYGAWAVTV 209 (232)
T ss_dssp SSSCCSSCCHHHHHHHHHT-TCCEEEESCCCSHH-----HHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCHHHHHHHHhc-CCcEEEECCCCCHH-----HHHHHHHcCCCEEEE
Confidence 122 267888888877 99988776676654 356666678888765
Done!